Your job contains 1 sequence.
>psy9182
MTILYDPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASE
KEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIV
SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS
HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL
QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWD
VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV
NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR
LWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR
TLVVSI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9182
(486 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 1321 8.3e-164 2
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 1304 1.4e-160 3
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 1309 2.3e-160 3
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 1310 3.3e-158 2
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 1310 3.3e-158 2
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 1309 4.2e-158 2
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 1309 4.2e-158 2
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 1298 8.8e-158 2
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 1302 2.3e-157 2
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 1302 2.3e-157 2
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 1302 2.3e-157 2
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 1290 6.2e-157 2
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 1290 6.2e-157 2
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 1290 6.2e-157 2
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 1290 6.2e-157 2
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 1290 6.2e-157 2
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 1290 6.2e-157 2
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 1289 7.9e-157 2
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 1287 1.3e-156 2
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 1287 1.3e-156 2
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 1287 1.3e-156 2
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 1276 2.7e-154 2
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 1266 5.0e-153 2
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 1274 7.3e-130 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 1274 7.3e-130 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 541 6.9e-55 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 471 3.1e-54 3
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 473 1.1e-52 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 473 2.3e-52 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 473 2.3e-52 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 473 2.3e-52 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 473 8.7e-52 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 473 1.0e-51 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 478 4.4e-50 2
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 360 1.8e-43 3
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 421 1.3e-41 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 358 4.1e-41 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 433 1.7e-40 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 339 1.5e-39 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 369 4.8e-39 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 369 4.8e-39 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 317 3.4e-38 3
ASPGD|ASPL0000034848 - symbol:AN2861 species:162425 "Emer... 362 7.5e-38 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 332 1.2e-37 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 317 1.5e-37 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 317 1.5e-37 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 317 1.5e-37 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 317 1.5e-37 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 317 1.5e-37 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 317 1.5e-37 2
ASPGD|ASPL0000032070 - symbol:fbx23 species:162425 "Emeri... 382 3.9e-37 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 337 5.1e-37 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 308 2.2e-36 2
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 394 7.7e-36 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 320 1.3e-35 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 320 4.7e-34 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 315 1.2e-32 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 276 5.9e-31 2
CGD|CAL0002484 - symbol:CDC4 species:5476 "Candida albica... 348 8.7e-31 1
UNIPROTKB|Q5A9A6 - symbol:CDC4 "Potential ubiquitin ligas... 348 8.7e-31 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 353 1.2e-30 1
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 323 2.3e-30 3
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 345 3.3e-30 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 316 3.2e-28 1
UNIPROTKB|G4MWF1 - symbol:MGG_08345 "Uncharacterized prot... 278 4.0e-28 2
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 331 3.5e-27 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 289 4.9e-27 2
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 280 8.1e-27 2
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 246 1.4e-26 2
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 311 1.9e-26 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 313 3.3e-26 2
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 313 6.7e-26 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 272 7.0e-26 2
WB|WBGene00010556 - symbol:rack-1 species:6239 "Caenorhab... 255 2.1e-25 2
UNIPROTKB|Q21215 - symbol:rack-1 "Guanine nucleotide-bind... 255 2.1e-25 2
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 266 4.3e-25 2
ZFIN|ZDB-GENE-070112-2212 - symbol:traf7 "TNF receptor-as... 309 4.7e-25 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 305 5.5e-25 1
UNIPROTKB|F1P0J6 - symbol:TRAF7 "Uncharacterized protein"... 308 6.8e-25 1
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 308 7.1e-25 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 287 7.1e-25 1
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 307 1.0e-24 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 297 1.6e-24 1
UNIPROTKB|E2QXW8 - symbol:TRAF7 "Uncharacterized protein"... 299 4.3e-24 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 279 5.7e-24 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 279 5.7e-24 1
MGI|MGI:3042141 - symbol:Traf7 "TNF receptor-associated f... 299 5.8e-24 1
RGD|1559653 - symbol:Traf7 "TNF receptor-associated facto... 299 6.8e-24 1
UNIPROTKB|I3LMJ3 - symbol:LOC100738291 "Uncharacterized p... 296 7.4e-24 1
UNIPROTKB|Q6Q0C0 - symbol:TRAF7 "E3 ubiquitin-protein lig... 295 1.4e-23 2
UNIPROTKB|Q5EA56 - symbol:TRAF7 "Uncharacterized protein"... 298 1.5e-23 2
POMBASE|SPAC4D7.03 - symbol:pop2 "F-box/WD repeat protein... 269 1.9e-23 3
SGD|S000001885 - symbol:CDC4 "F-box protein required for ... 294 2.8e-23 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 267 3.9e-23 2
UNIPROTKB|F1RFA9 - symbol:TRAF7 "Uncharacterized protein"... 296 4.3e-23 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 278 3.1e-22 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 248 3.4e-22 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 260 4.5e-22 2
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 279 5.3e-22 1
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 261 5.8e-22 1
WARNING: Descriptions of 1505 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 1321 (470.1 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 245/271 (90%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNTIK+WDR LQC+K L G
Sbjct: 189 IENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMG 248
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 249 HTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSK 308
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 309 DRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRT 368
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 369 LNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVS 428
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 429 GAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459
Score = 342 (125.4 bits), Expect = 2.7e-58, Sum P(2) = 2.7e-58
Identities = 76/254 (29%), Positives = 135/254 (53%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
LQ + ++ V CLQYDD I+SG D+T++VWD + + + L H +VL L+++
Sbjct: 240 LQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN 299
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
++++ S D ++ VWD+ + + L+ H AV + F +V+ S DR+I VW
Sbjct: 300 NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWS 359
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
S E R L GH+ + + + ++ +VS S D +I++W+ +R L GH+ +
Sbjct: 360 -TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELV 416
Query: 401 ACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAKRIV 451
C+++ + +VSG+ D I++WD+ CL L H V ++FD +IV
Sbjct: 417 RCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIV 476
Query: 452 SGAYDGKIKVWNLV 465
S ++D I +W+ +
Sbjct: 477 SSSHDDTILIWDFL 490
Score = 326 (119.8 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 96/312 (30%), Positives = 150/312 (48%)
Query: 131 WNTSSCEFVRTLN---GHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQIVSS--SHDD 183
W T +R +N + +G+ CLQY D +VSG DNTI+ R + Q V + H
Sbjct: 193 WRTGR-HMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTG 251
Query: 184 TILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYD 243
++L L Y + I W + + +N + + V L+++
Sbjct: 252 SVLC---LQYDDKVIISGSSDSTVRV-------WDVNTG--EMVNTLIHHCEAVLHLRFN 299
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWD 300
+ +V+ +D +I VWD S I +VL GH +V + +DE+ I+S S D T++VW
Sbjct: 300 NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWS 359
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
+T E V TL H + L++ + ++V+ S D SI +WD+ RVL GH V
Sbjct: 360 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECG---ACLRVLEGHEELV 416
Query: 361 NVVDFDEKYIVSASGDRTIKVWN---------TSSCEFVRTLNGHKRGIACLQYRDRLVV 411
+ FD K IVS + D IKVW+ S+ + TL H + LQ+ + +V
Sbjct: 417 RCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIV 476
Query: 412 SGSSDNTIRLWD 423
S S D+TI +WD
Sbjct: 477 SSSHDDTILIWD 488
Score = 295 (108.9 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 51/81 (62%), Positives = 67/81 (82%)
Query: 32 SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
++++ Q T+LYDP RKK+ +P + +E+E+CF+YF +WSE Q+DFVE+LLSRMCHYQ
Sbjct: 13 TNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQ 72
Query: 92 HGHINTYLKPMLQRDFISLLP 112
HG IN YLKPMLQRDFI+LLP
Sbjct: 73 HGQINAYLKPMLQRDFITLLP 93
Score = 284 (105.0 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FDEKYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IR D
Sbjct: 340 DFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWD 399
Score = 226 (84.6 bits), Expect = 4.9e-56, Sum P(3) = 4.9e-56
Identities = 47/126 (37%), Positives = 74/126 (58%)
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS 292
+ +G+ CLQY D +VSG DN+I++WD C++VL GH V C+++D + I+SG+
Sbjct: 372 HKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAY 431
Query: 293 DSTVRVWDV----------NTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342
D ++VWD+ NT +NTL+ H V L+F +V+ S D +I +WD +
Sbjct: 432 DGKIKVWDLVAALDPRAASNT-LCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWDFL 490
Query: 343 S--PNE 346
+ PNE
Sbjct: 491 NFTPNE 496
Score = 153 (58.9 bits), Expect = 4.9e-56, Sum P(3) = 4.9e-56
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D+ IVS D TIK+W+ + + V+TL GH + CLQY D++++SGSSD+T+R D
Sbjct: 218 YDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWD 276
Score = 138 (53.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
FD K IVS + D IKVW+ + R + CL + LV +++ DE
Sbjct: 421 FDTKRIVSGAYDGKIKVWDLVAALDPRAASN----TLCL---NTLVEHTGRVFRLQF-DE 472
Query: 174 FQIVSSSHDDTILIWDFLNYS 194
FQIVSSSHDDTILIWDFLN++
Sbjct: 473 FQIVSSSHDDTILIWDFLNFT 493
Score = 105 (42.0 bits), Expect = 5.0e-51, Sum P(3) = 5.0e-51
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D+K I+S S D T++VW+ ++ E V TL H + L++ + ++V+ S D +I D
Sbjct: 258 YDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 316
Score = 101 (40.6 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ ++ +VS S D +I++W+ +R L GH+ + C+++ + +VSG+ D I+ D
Sbjct: 381 YRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWD 439
Score = 93 (37.8 bits), Expect = 9.0e-50, Sum P(3) = 9.0e-50
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWN-TSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ TS E R L GH+ + + + ++ +VS S D TI+
Sbjct: 298 FNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIK 356
Score = 82 (33.9 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 227 INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
+N E++ V+ LQ+D+ +IVS D+TI +WD ++ + TG T S +++
Sbjct: 455 LNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWDFLNFTPNENKTGRTPSPALMEH 510
Score = 78 (32.5 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 2 TILYDPNRKKEPAPQFASEKEMC-PYLT 28
T+LYDP RKK+ +P + +E+E+C Y T
Sbjct: 23 TMLYDPVRKKDSSPTYQTERELCFQYFT 50
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 1304 (464.1 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 242/271 (89%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+LVAALDPRAP TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552
Score = 346 (126.9 bits), Expect = 2.9e-70, Sum P(4) = 2.9e-70
Identities = 78/248 (31%), Positives = 138/248 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 346 VLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 406 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 462
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 522
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 523 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 582
Query: 465 VAALDPRA 472
+ DP A
Sbjct: 583 LN--DPAA 588
Score = 325 (119.5 bits), Expect = 3.7e-51, Sum P(3) = 3.7e-51
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 492
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 493 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL- 551
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 552 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 321 (118.1 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC---LQYDERVIITGS 360
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 361 SDSTVRV-------WDVNAG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 411
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 472 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 528
Query: 380 KVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 529 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 253 (94.1 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 121 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 179
Query: 107 FISLLP 112
FI+ LP
Sbjct: 180 FITALP 185
Score = 149 (57.5 bits), Expect = 2.9e-70, Sum P(4) = 2.9e-70
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ ++ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 369
Score = 144 (55.7 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 41/81 (50%), Positives = 46/81 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR- 171
FD K IVS + D IKVW + V L+ G CL R +V S R +
Sbjct: 514 FDNKRIVSGAYDGKIKVW-----DLVAALDPRAPAGTLCL----RTLVEHSG-RVFRLQF 563
Query: 172 DEFQIVSSSHDDTILIWDFLN 192
DEFQIVSSSHDDTILIWDFLN
Sbjct: 564 DEFQIVSSSHDDTILIWDFLN 584
Score = 99 (39.9 bits), Expect = 2.9e-25, Sum P(3) = 2.9e-25
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 409
Score = 92 (37.4 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 391 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 449
Score = 62 (26.9 bits), Expect = 2.2e-137, Sum P(2) = 2.2e-137
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 27 LTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMC 64
L + SS + +P + LY+P PA Q +SE+E C
Sbjct: 23 LWLGCSSLADSMPSLRCLYNPGTGALPAFQNSSEREDC 60
Score = 44 (20.5 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 4 LYDPNRKKEPAPQFASEKEMC 24
LY+P PA Q +SE+E C
Sbjct: 40 LYNPGTGALPAFQNSSEREDC 60
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 1309 (465.8 bits), Expect = 2.3e-160, Sum P(3) = 2.3e-160
Identities = 243/271 (89%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 241 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 300
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 301 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 360
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 361 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 420
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 421 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 480
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+LVAALDPRAP TLCLRTLV
Sbjct: 481 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 511
Score = 350 (128.3 bits), Expect = 1.5e-72, Sum P(4) = 1.5e-72
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 305 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 364
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 365 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 421
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 422 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 481
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 482 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 541
Query: 465 V-----AALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 542 LNDPAAQAEPPRSPSRT 558
Score = 325 (119.5 bits), Expect = 8.6e-51, Sum P(3) = 8.6e-51
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 392 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 451
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 452 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL- 510
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 511 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 540
Score = 321 (118.1 bits), Expect = 3.9e-50, Sum P(3) = 3.9e-50
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 263 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC---LQYDERVIITGS 319
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 320 SDSTVRV-------WDVNTG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 370
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 371 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 430
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 431 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 487
Query: 380 KVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 488 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 540
Score = 253 (94.1 bits), Expect = 2.3e-160, Sum P(3) = 2.3e-160
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 80 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 138
Query: 107 FISLLP 112
FI+ LP
Sbjct: 139 FITALP 144
Score = 149 (57.5 bits), Expect = 1.5e-72, Sum P(4) = 1.5e-72
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ ++ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 270 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 328
Score = 144 (55.7 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 41/81 (50%), Positives = 46/81 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR- 171
FD K IVS + D IKVW + V L+ G CL R +V S R +
Sbjct: 473 FDNKRIVSGAYDGKIKVW-----DLVAALDPRAPAGTLCL----RTLVEHSG-RVFRLQF 522
Query: 172 DEFQIVSSSHDDTILIWDFLN 192
DEFQIVSSSHDDTILIWDFLN
Sbjct: 523 DEFQIVSSSHDDTILIWDFLN 543
Score = 99 (39.9 bits), Expect = 9.2e-25, Sum P(3) = 9.2e-25
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 310 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 368
Score = 92 (37.4 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 350 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 408
Score = 37 (18.1 bits), Expect = 2.3e-160, Sum P(3) = 2.3e-160
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 27 LTISVSSASPQLPPMTILYDP 47
L + SS + +P + LY+P
Sbjct: 8 LWLGCSSLADSMPSLRCLYNP 28
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 1310 (466.2 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
Identities = 243/271 (89%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+LVAALDPRAP TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552
Score = 350 (128.3 bits), Expect = 7.9e-70, Sum P(3) = 7.9e-70
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 346 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 406 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 462
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 522
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 523 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 582
Query: 465 V-----AALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 583 LNDPAAQAEPPRSPSRT 599
Score = 325 (119.5 bits), Expect = 6.8e-50, Sum P(2) = 6.8e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 492
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 493 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL- 551
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 552 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 321 (118.1 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLC---LQYDERVIITGS 360
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 361 SDSTVRV-------WDVNTG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 411
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 472 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 528
Query: 380 KVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 529 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 253 (94.1 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 121 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 179
Query: 107 FISLLP 112
FI+ LP
Sbjct: 180 FITALP 185
Score = 152 (58.6 bits), Expect = 7.9e-70, Sum P(3) = 7.9e-70
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ S+ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 369
Score = 144 (55.7 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 41/81 (50%), Positives = 46/81 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR- 171
FD K IVS + D IKVW + V L+ G CL R +V S R +
Sbjct: 514 FDNKRIVSGAYDGKIKVW-----DLVAALDPRAPAGTLCL----RTLVEHSG-RVFRLQF 563
Query: 172 DEFQIVSSSHDDTILIWDFLN 192
DEFQIVSSSHDDTILIWDFLN
Sbjct: 564 DEFQIVSSSHDDTILIWDFLN 584
Score = 99 (39.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 351 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 409
Score = 92 (37.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 391 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 449
Score = 58 (25.5 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 12 EPAPQFASEKE---MCPY---LTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMC 64
+PA EK MC L + SS + +P + LY+P A Q +SE+E C
Sbjct: 2 DPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC 60
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 1310 (466.2 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
Identities = 243/271 (89%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 246 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 305
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 306 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 365
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 366 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 425
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 426 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 485
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+LVAALDPRAP TLCLRTLV
Sbjct: 486 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 516
Score = 350 (128.3 bits), Expect = 3.0e-70, Sum P(3) = 3.0e-70
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 310 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 369
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 370 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 426
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 427 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 486
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 487 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 546
Query: 465 V-----AALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 547 LNDPAAQAEPPRSPSRT 563
Score = 325 (119.5 bits), Expect = 4.1e-50, Sum P(2) = 4.1e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 397 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 456
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 457 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL- 515
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 516 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 545
Score = 321 (118.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 268 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLC---LQYDERVIITGS 324
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 325 SDSTVRV-------WDVNTG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 375
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 376 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 435
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 436 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 492
Query: 380 KVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 493 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 545
Score = 253 (94.1 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 85 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 143
Query: 107 FISLLP 112
FI+ LP
Sbjct: 144 FITALP 149
Score = 152 (58.6 bits), Expect = 3.0e-70, Sum P(3) = 3.0e-70
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ S+ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 275 YDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 333
Score = 144 (55.7 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 41/81 (50%), Positives = 46/81 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR- 171
FD K IVS + D IKVW + V L+ G CL R +V S R +
Sbjct: 478 FDNKRIVSGAYDGKIKVW-----DLVAALDPRAPAGTLCL----RTLVEHSG-RVFRLQF 527
Query: 172 DEFQIVSSSHDDTILIWDFLN 192
DEFQIVSSSHDDTILIWDFLN
Sbjct: 528 DEFQIVSSSHDDTILIWDFLN 548
Score = 99 (39.9 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 315 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 373
Score = 92 (37.4 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 355 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 413
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 1309 (465.8 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 243/271 (89%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+LVAALDPRAP TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552
Score = 350 (128.3 bits), Expect = 1.6e-69, Sum P(3) = 1.6e-69
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 346 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 406 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 462
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 522
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 523 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 582
Query: 465 V-----AALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 583 LNDPAAQAEPPRSPSRT 599
Score = 325 (119.5 bits), Expect = 6.8e-50, Sum P(2) = 6.8e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 492
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 493 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL- 551
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 552 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 321 (118.1 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC---LQYDERVIITGS 360
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 361 SDSTVRV-------WDVNTG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 411
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 472 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 528
Query: 380 KVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 529 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 253 (94.1 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 121 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 179
Query: 107 FISLLP 112
FI+ LP
Sbjct: 180 FITALP 185
Score = 149 (57.5 bits), Expect = 1.6e-69, Sum P(3) = 1.6e-69
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ ++ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 369
Score = 144 (55.7 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 41/81 (50%), Positives = 46/81 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR- 171
FD K IVS + D IKVW + V L+ G CL R +V S R +
Sbjct: 514 FDNKRIVSGAYDGKIKVW-----DLVAALDPRAPAGTLCL----RTLVEHSG-RVFRLQF 563
Query: 172 DEFQIVSSSHDDTILIWDFLN 192
DEFQIVSSSHDDTILIWDFLN
Sbjct: 564 DEFQIVSSSHDDTILIWDFLN 584
Score = 99 (39.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 351 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 409
Score = 92 (37.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 391 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 449
Score = 58 (25.5 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 12 EPAPQFASEKE---MCPY---LTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMC 64
+PA EK MC L + SS + +P + LY+P A Q +SE+E C
Sbjct: 2 DPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC 60
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 1309 (465.8 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 242/271 (89%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 183 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 242
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 243 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 302
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 303 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 362
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 363 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 422
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L+AALDPRAP TLCLRTLV
Sbjct: 423 GAYDGKIKVWDLIAALDPRAPAGTLCLRTLV 453
Score = 350 (128.3 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 247 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 306
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 307 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 363
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 364 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 423
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 424 AYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 483
Query: 465 V-----AALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 484 LNDPAAQAEPPRSPSRT 500
Score = 325 (119.5 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 334 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 393
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 394 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTL- 452
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 453 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 321 (118.1 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 205 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLC---LQYDERVIITGS 261
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 262 SDSTVRV-------WDVNTG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 312
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 313 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 372
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 373 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 429
Query: 380 KVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 430 KVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 253 (94.1 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 22 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 80
Query: 107 FISLLP 112
FI+ LP
Sbjct: 81 FITALP 86
Score = 152 (58.6 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ S+ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 212 YDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 270
Score = 143 (55.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 40/80 (50%), Positives = 45/80 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R G CL R +V S R + D
Sbjct: 415 FDNKRIVSGAYDGKIKVWDLIAALDPRA----PAGTLCL----RTLVEHSG-RVFRLQFD 465
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQIVSSSHDDTILIWDFLN
Sbjct: 466 EFQIVSSSHDDTILIWDFLN 485
Score = 99 (39.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 252 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 310
Score = 92 (37.4 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 292 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 350
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 1298 (462.0 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 240/271 (88%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 192 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 251
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 252 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 311
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 312 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 371
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 372 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 431
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 432 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 462
Score = 357 (130.7 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 80/268 (29%), Positives = 145/268 (54%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 240 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 299
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 300 RFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 359
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 360 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 416
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 417 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 476
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P AP T
Sbjct: 477 QIISSSHDDTILIWDFLN-VPPSAPNET 503
Score = 318 (117.0 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 212 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 268
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 269 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 319
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 320 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 379
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 380 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 436
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 437 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 491
Score = 285 (105.4 bits), Expect = 6.8e-46, Sum P(2) = 6.8e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 343 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 402
Score = 261 (96.9 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 33 SRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 92
Query: 108 ISLLP 112
I+ LP
Sbjct: 93 ITALP 97
Score = 151 (58.2 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 29/83 (34%), Positives = 54/83 (65%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 221 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 280
Query: 173 -EFQIVSS--SHDDTILIWDFLN 192
+++++ H++ +L F N
Sbjct: 281 NTGEVLNTLIHHNEAVLHLRFSN 303
Score = 138 (53.6 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 424 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 474
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 475 EFQIISSSHDDTILIWDFLN 494
Score = 107 (42.7 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG+ D I+ D
Sbjct: 384 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 442
Score = 103 (41.3 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ IV+ S D T++VW+ ++ E + TL H + L++ + L+V+ S D +I D
Sbjct: 261 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 319
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 1302 (463.4 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 241/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L+AALDPRAP TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552
Score = 349 (127.9 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 346 VLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 406 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 462
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 522
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 523 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 582
Query: 465 VA-----ALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 583 LNDPAAHAEPPRSPSRT 599
Score = 325 (119.5 bits), Expect = 6.8e-50, Sum P(2) = 6.8e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 492
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 493 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTL- 551
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 552 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 321 (118.1 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLC---LQYDERVIITGS 360
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 361 SDSTVRV-------WDVNAG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 411
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 472 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 528
Query: 380 KVWNTSSCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 529 KVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 253 (94.1 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 121 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 179
Query: 107 FISLLP 112
FI+ LP
Sbjct: 180 FITALP 185
Score = 152 (58.6 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ S+ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 369
Score = 144 (55.7 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 40/80 (50%), Positives = 45/80 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R G CL R +V S R + D
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLMAALDPRA----PAGTLCL----RTLVEHSG-RVFRLQFD 564
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQIVSSSHDDTILIWDFLN
Sbjct: 565 EFQIVSSSHDDTILIWDFLN 584
Score = 99 (39.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 409
Score = 92 (37.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 391 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 449
Score = 58 (25.5 bits), Expect = 9.4e-137, Sum P(2) = 9.4e-137
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 12 EPAPQFASEKE---MCPY---LTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMC 64
+PA EK MC L + SS + +P + LY+P A Q +SE+E C
Sbjct: 2 DPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC 60
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 1302 (463.4 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 241/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L+AALDPRAP TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552
Score = 349 (127.9 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 346 VLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 406 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 462
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 463 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 522
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 523 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 582
Query: 465 VA-----ALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 583 LNDPATHAEPPRSPSRT 599
Score = 325 (119.5 bits), Expect = 6.8e-50, Sum P(2) = 6.8e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 492
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 493 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTL- 551
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 552 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 321 (118.1 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 304 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLC---LQYDERVIITGS 360
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 361 SDSTVRV-------WDVNAG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 411
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 472 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 528
Query: 380 KVWNTSSCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 529 KVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 253 (94.1 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 121 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 179
Query: 107 FISLLP 112
FI+ LP
Sbjct: 180 FITALP 185
Score = 152 (58.6 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ S+ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 369
Score = 144 (55.7 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 40/80 (50%), Positives = 45/80 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R G CL R +V S R + D
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLMAALDPRA----PAGTLCL----RTLVEHSG-RVFRLQFD 564
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQIVSSSHDDTILIWDFLN
Sbjct: 565 EFQIVSSSHDDTILIWDFLN 584
Score = 99 (39.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 409
Score = 92 (37.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 391 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 449
Score = 54 (24.1 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 27 LTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMC 64
L + SS + +P + LY+P A Q +SE+E C
Sbjct: 23 LWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC 60
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 1302 (463.4 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 241/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 183 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 242
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 243 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 302
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 303 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 362
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 363 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 422
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L+AALDPRAP TLCLRTLV
Sbjct: 423 GAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 453
Score = 349 (127.9 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 80/257 (31%), Positives = 142/257 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V CLQYD+ I++G D+T++VWD + + + L H +VL L+++ ++++ S D ++
Sbjct: 247 VLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 306
Query: 297 RVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWD+ + + L+ H AV + F + +V+ S DR+I VW+ S E R L
Sbjct: 307 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN-TSTCEFV--RTL 363
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
GH+ + + + ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG
Sbjct: 364 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 423
Query: 414 SSDNTIRLWDI--------ECGA-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ D I++WD+ G CLR L H V ++FD +IVS ++D I +W+
Sbjct: 424 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 483
Query: 465 VA-----ALDPRAPTTT 476
+ A PR+P+ T
Sbjct: 484 LNDPATHAEPPRSPSRT 500
Score = 325 (119.5 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 76/152 (50%), Positives = 93/152 (61%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 334 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 393
Query: 173 -EFQI---VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E V H++ + F N ++ G L+ +
Sbjct: 394 IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTL- 452
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
E+S V+ LQ+D+ +IVS D+TI +WD
Sbjct: 453 --VEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 321 (118.1 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXX 202
+G+ CLQY D+ +VSG DNTI+ D E + + + H ++L L Y E I
Sbjct: 205 KGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLC---LQYDERVIITGS 261
Query: 203 XXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
W + + +N + + V L++++ +V+ +D +I VWD
Sbjct: 262 SDSTVRV-------WDVNAG--EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 312
Query: 263 SLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL H +
Sbjct: 313 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 372
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D I
Sbjct: 373 LQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 429
Query: 380 KVWNTSSCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
KVW+ + +RTL H + LQ+ + +VS S D+TI +WD
Sbjct: 430 KVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 253 (94.1 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 22 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 80
Query: 107 FISLLP 112
FI+ LP
Sbjct: 81 FITALP 86
Score = 152 (58.6 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D++ IVS D TIK+W+ S+ E R L GH + CLQY +R++++GSSD+T+R D
Sbjct: 212 YDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 270
Score = 144 (55.7 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 40/80 (50%), Positives = 45/80 (56%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R G CL R +V S R + D
Sbjct: 415 FDNKRIVSGAYDGKIKVWDLMAALDPRA----PAGTLCL----RTLVEHSG-RVFRLQFD 465
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQIVSSSHDDTILIWDFLN
Sbjct: 466 EFQIVSSSHDDTILIWDFLN 485
Score = 99 (39.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ I++ S D T++VW+ ++ E + TL H + L++ + ++V+ S D +I D
Sbjct: 252 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 310
Score = 92 (37.4 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F+ +V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 292 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 350
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 1290 (459.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 207 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 266
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 267 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 326
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 327 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 386
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 387 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 446
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 447 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 477
Score = 386 (140.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 90/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 236 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 295
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 296 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 348
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 349 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 406
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 407 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 466
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 467 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 506
Score = 351 (128.6 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 255 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 314
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 315 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 374
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 375 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 431
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 432 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 491
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 492 QIISSSHDDTILIWDFLN-VPPSAQNET 518
Score = 320 (117.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 227 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 283
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 284 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 334
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 335 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 394
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 395 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 451
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 452 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 506
Score = 285 (105.4 bits), Expect = 8.5e-46, Sum P(2) = 8.5e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 358 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 417
Score = 261 (96.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 48 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 107
Query: 108 ISLLP 112
I+ LP
Sbjct: 108 ITALP 112
Score = 138 (53.6 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 439 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 489
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 490 EFQIISSSHDDTILIWDFLN 509
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 1290 (459.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 206 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 265
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 266 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 325
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 326 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 385
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 386 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 445
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 446 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 476
Score = 386 (140.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 90/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 235 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 294
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 295 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 347
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 348 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 405
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 406 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 465
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 466 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 505
Score = 351 (128.6 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 254 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 313
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 314 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 373
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 374 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 430
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 431 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 490
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 491 QIISSSHDDTILIWDFLN-VPPSAQNET 517
Score = 320 (117.7 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 226 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 282
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 283 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 333
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 334 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 393
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 394 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 450
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 451 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 505
Score = 285 (105.4 bits), Expect = 8.4e-46, Sum P(2) = 8.4e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 357 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 416
Score = 261 (96.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 47 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 106
Query: 108 ISLLP 112
I+ LP
Sbjct: 107 ITALP 111
Score = 138 (53.6 bits), Expect = 6.4e-30, Sum P(2) = 6.4e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 438 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 488
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 489 EFQIISSSHDDTILIWDFLN 508
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 1290 (459.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 219 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 278
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 338
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 339 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 399 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 458
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 459 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 489
Score = 386 (140.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 90/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 248 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 307
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 308 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 360
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 361 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 418
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 478
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 479 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 351 (128.6 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 267 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 326
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 327 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 386
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 387 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 444 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 503
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 504 QIISSSHDDTILIWDFLN-VPPSAQNET 530
Score = 320 (117.7 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 239 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 295
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 296 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 346
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 406
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 407 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 463
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 464 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 285 (105.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 429
Score = 261 (96.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 60 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 119
Query: 108 ISLLP 112
I+ LP
Sbjct: 120 ITALP 124
Score = 138 (53.6 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 451 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 501
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 502 EFQIISSSHDDTILIWDFLN 521
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 1290 (459.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 187 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 246
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 247 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 306
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 307 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 366
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 367 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 426
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 427 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 457
Score = 386 (140.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 90/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 216 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 275
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 276 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 328
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 329 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 386
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 387 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 446
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 447 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 351 (128.6 bits), Expect = 8.1e-58, Sum P(2) = 8.1e-58
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 235 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 294
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 295 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 354
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 355 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 412 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 471
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 472 QIISSSHDDTILIWDFLN-VPPSAQNET 498
Score = 320 (117.7 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 207 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 263
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 264 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 314
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 374
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 375 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 431
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 432 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 285 (105.4 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 397
Score = 261 (96.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 28 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 87
Query: 108 ISLLP 112
I+ LP
Sbjct: 88 ITALP 92
Score = 138 (53.6 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 419 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 469
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 470 EFQIISSSHDDTILIWDFLN 489
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 1290 (459.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 187 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 246
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 247 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 306
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 307 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 366
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 367 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 426
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 427 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 457
Score = 386 (140.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 90/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 216 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 275
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 276 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 328
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 329 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 386
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 387 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 446
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 447 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 351 (128.6 bits), Expect = 8.1e-58, Sum P(2) = 8.1e-58
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 235 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 294
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 295 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 354
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 355 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 412 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 471
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 472 QIISSSHDDTILIWDFLN-VPPSAQNET 498
Score = 320 (117.7 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 207 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 263
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 264 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 314
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 374
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 375 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 431
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 432 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 285 (105.4 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 397
Score = 261 (96.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 28 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 87
Query: 108 ISLLP 112
I+ LP
Sbjct: 88 ITALP 92
Score = 138 (53.6 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 419 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 469
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 470 EFQIISSSHDDTILIWDFLN 489
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 1290 (459.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 219 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 278
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 338
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 339 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 399 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 458
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 459 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 489
Score = 386 (140.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 90/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 248 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 307
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 308 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 360
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 361 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 418
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 478
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 479 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 351 (128.6 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 267 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 326
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 327 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 386
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 387 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 444 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 503
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 504 QIISSSHDDTILIWDFLN-VPPSAQNET 530
Score = 320 (117.7 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 239 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVIVT 295
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 296 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 346
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 406
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 407 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 463
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 464 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 285 (105.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 429
Score = 261 (96.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 60 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 119
Query: 108 ISLLP 112
I+ LP
Sbjct: 120 ITALP 124
Score = 138 (53.6 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 451 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 501
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 502 EFQIISSSHDDTILIWDFLN 521
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 1289 (458.8 bits), Expect = 7.9e-157, Sum P(2) = 7.9e-157
Identities = 240/272 (88%), Positives = 259/272 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 199 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 258
Query: 273 HTGSVLCLQYDERVIISGSSDSTV-RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
HTGSVLCLQYDERVI++GSSDSTV RVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCS
Sbjct: 259 HTGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCS 318
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
KDRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVR
Sbjct: 319 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVR 378
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV 451
TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIV
Sbjct: 379 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIV 438
Query: 452 SGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
SGAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 439 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 470
Score = 348 (127.6 bits), Expect = 3.7e-57, Sum P(2) = 3.7e-57
Identities = 80/269 (29%), Positives = 145/269 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLC 279
K L+ + + ++ V CLQYD+ IV+G D+T+ +VWD + + + L H +VL
Sbjct: 247 KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLH 306
Query: 280 LQYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSI 336
L++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 307 LRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 366
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH
Sbjct: 367 KVWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 423
Query: 397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDA 447
+ + C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 424 EELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE 483
Query: 448 KRIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P AP T
Sbjct: 484 FQIISSSHDDTILIWDFLN-VPPSAPNET 511
Score = 324 (119.1 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 88/295 (29%), Positives = 146/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 219 NSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLC---LQYDERVI-- 273
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
+ W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 274 ----VTGSSDSTVSRVWDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 327
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 328 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 387
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 388 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 444
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 445 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 499
Score = 285 (105.4 bits), Expect = 7.7e-46, Sum P(2) = 7.7e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 351 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 410
Score = 261 (96.9 bits), Expect = 7.9e-157, Sum P(2) = 7.9e-157
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 40 SRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 99
Query: 108 ISLLP 112
I+ LP
Sbjct: 100 ITALP 104
Score = 142 (55.0 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 23/55 (41%), Positives = 40/55 (72%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 168
+D++ I+S D +IK+W+ +S E ++ L GH + CLQY +R++V+GSSD+T+
Sbjct: 228 YDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTV 282
Score = 138 (53.6 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 432 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 482
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 483 EFQIISSSHDDTILIWDFLN 502
Score = 107 (42.7 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG+ D I+ D
Sbjct: 392 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 450
Score = 94 (38.1 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 114 FDEKYIVSASGDRTI-KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ IV+ S D T+ +VW+ ++ E + TL H + L++ + L+V+ S D +I D
Sbjct: 268 YDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 327
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 1287 (458.1 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 219 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG 278
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 338
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 339 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 399 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 458
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 459 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 489
Score = 387 (141.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 91/280 (32%), Positives = 145/280 (51%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D+ I+S D +IK+W+ SS E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 248 YDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 307
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 308 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 360
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 361 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 418
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 478
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 479 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 351 (128.6 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 267 KSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 326
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 327 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 386
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 387 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 444 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 503
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 504 QIISSSHDDTILIWDFLN-VPPSAQNET 530
Score = 318 (117.0 bits), Expect = 3.9e-50, Sum P(2) = 3.9e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 239 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLC---LQYDERVIVT 295
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 296 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 346
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 406
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 407 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 463
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 464 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 285 (105.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 429
Score = 261 (96.9 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 60 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 119
Query: 108 ISLLP 112
I+ LP
Sbjct: 120 ITALP 124
Score = 138 (53.6 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 451 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 501
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 502 EFQIISSSHDDTILIWDFLN 521
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 1287 (458.1 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 170 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG 229
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 230 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 289
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 290 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 349
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 350 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 409
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 410 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 440
Score = 387 (141.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 91/280 (32%), Positives = 145/280 (51%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D+ I+S D +IK+W+ SS E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 199 YDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 258
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 259 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 311
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 312 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 369
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 370 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 429
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 430 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 469
Score = 351 (128.6 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 218 KSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 277
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 278 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 337
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 338 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 394
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 395 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 454
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 455 QIISSSHDDTILIWDFLN-VPPSAQNET 481
Score = 318 (117.0 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 190 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLC---LQYDERVIVT 246
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 247 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 297
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 298 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 357
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 358 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 414
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 415 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 469
Score = 285 (105.4 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 321 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 380
Score = 261 (96.9 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 11 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 70
Query: 108 ISLLP 112
I+ LP
Sbjct: 71 ITALP 75
Score = 138 (53.6 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 402 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 452
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 453 EFQIISSSHDDTILIWDFLN 472
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 1287 (458.1 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 204 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG 263
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct: 264 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 323
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 324 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 383
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 384 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 443
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 444 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 474
Score = 387 (141.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 91/280 (32%), Positives = 145/280 (51%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D+ I+S D +IK+W+ SS E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 233 YDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 292
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + L+R+
Sbjct: 293 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD-------ITLRRVLV 345
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 346 GHRAAVNV--VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 403
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 463
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 351 (128.6 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 79/268 (29%), Positives = 144/268 (53%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD + + + L H +VL L
Sbjct: 252 KSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL 311
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + + L+ H AV + F + +V+ S DR+I
Sbjct: 312 RFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 371
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 372 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 429 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 488
Query: 449 RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+I+S ++D I +W+ + + P A T
Sbjct: 489 QIISSSHDDTILIWDFLN-VPPSAQNET 515
Score = 318 (117.0 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 224 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLC---LQYDERVIVT 280
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 281 GSSDSTVRV-------WDVNTG--EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWD 331
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 332 MASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 391
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 392 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 448
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 449 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 285 (105.4 bits), Expect = 8.1e-46, Sum P(2) = 8.1e-46
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 414
Score = 261 (96.9 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 45 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 104
Query: 108 ISLLP 112
I+ LP
Sbjct: 105 ITALP 109
Score = 138 (53.6 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
Identities = 38/80 (47%), Positives = 44/80 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 436 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 486
Query: 173 EFQIVSSSHDDTILIWDFLN 192
EFQI+SSSHDDTILIWDFLN
Sbjct: 487 EFQIISSSHDDTILIWDFLN 506
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 1276 (454.2 bits), Expect = 2.7e-154, Sum P(2) = 2.7e-154
Identities = 235/271 (86%), Positives = 257/271 (94%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ +L+C+K+LTG
Sbjct: 204 IEANWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTG 263
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDVN+GE++NTLIHH EAVLHLRF NG+MVTCSK
Sbjct: 264 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGLMVTCSK 323
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM SP +I+LRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 324 DRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 383
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 384 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 443
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 444 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 474
Score = 348 (127.6 bits), Expect = 6.3e-56, Sum P(2) = 6.3e-56
Identities = 77/257 (29%), Positives = 141/257 (54%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
K L+ + + ++ V CLQYD+ IV+G D+T++VWD S + + L H +VL L
Sbjct: 252 KQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHL 311
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIA 337
++ ++++ S D ++ VWD+ + ++ L+ H AV + F + +V+ S DR+I
Sbjct: 312 RFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 371
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
VW S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+
Sbjct: 372 VWS-TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAK 448
+ C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD
Sbjct: 429 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF 488
Query: 449 RIVSGAYDGKIKVWNLV 465
+I+S ++D I +W+ +
Sbjct: 489 QIISSSHDDTILIWDFL 505
Score = 314 (115.6 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 86/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + + + H ++L L Y E I
Sbjct: 224 NSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLC---LQYDERVIVT 280
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 281 GSSDSTVRV-------WDVNSG--EVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWD 331
Query: 261 RVS---LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S + +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 332 MASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 391
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 392 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 448
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 449 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 285 (105.4 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 414
Score = 250 (93.1 bits), Expect = 2.7e-154, Sum P(2) = 2.7e-154
Identities = 51/101 (50%), Positives = 69/101 (68%)
Query: 15 PQFASEKEMCPYLTISVSS-ASPQLP--PMTILYDPNRKKEPAPQFASEKEMCFKYFDKW 71
PQ A P +T+ S+ PQ+ P+T +RK+ + EK++C + FD+W
Sbjct: 16 PQTADRS---PKITLIKSTFICPQVSNGPLT----GSRKRPSEGNYEKEKDVCIQLFDQW 68
Query: 72 SEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
SE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDFI+ LP
Sbjct: 69 SEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALP 109
Score = 217 (81.4 bits), Expect = 2.1e-48, Sum P(3) = 2.1e-48
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS 292
+ +G+ CLQY D +VSG DNTI++WD C++VL GH V C+++D + I+SG+
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY 446
Query: 293 DSTVRVWDVNTGE---------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS 343
D ++VWD+ + TL+ H V L+F +++ S D +I +WD ++
Sbjct: 447 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN 506
Score = 148 (57.2 bits), Expect = 2.1e-48, Sum P(3) = 2.1e-48
Identities = 28/83 (33%), Positives = 53/83 (63%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D++ I+S D +IK+W+ + E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 233 YDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 292
Query: 173 -EFQIVSS--SHDDTILIWDFLN 192
+++++ H++ +L F N
Sbjct: 293 NSGEVLNTLIHHNEAVLHLRFCN 315
Score = 141 (54.7 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 39/82 (47%), Positives = 45/82 (54%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 436 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 486
Query: 173 EFQIVSSSHDDTILIWDFLNYS 194
EFQI+SSSHDDTILIWDFLN S
Sbjct: 487 EFQIISSSHDDTILIWDFLNVS 508
Score = 107 (42.7 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ ++ +VS S D TI++W+ +R L GH+ + C+++ ++ +VSG+ D I+ D
Sbjct: 396 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 454
Score = 104 (41.7 bits), Expect = 8.1e-44, Sum P(3) = 8.1e-44
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+DE+ IV+ S D T++VW+ +S E + TL H + L++ + L+V+ S D +I D
Sbjct: 273 YDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWD 331
Score = 88 (36.0 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 119 IVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
+V+ S DR+I VW+ +S + R L GH+ + + + D+ +VS S D TI+
Sbjct: 318 MVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 371
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 1266 (450.7 bits), Expect = 5.0e-153, Sum P(2) = 5.0e-153
Identities = 235/271 (86%), Positives = 256/271 (94%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE NWR G+ LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct: 204 IEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTG 263
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTGSVLCLQYDERVI++GSSDSTVRVWDV++GE++NTLIHH EAVLHLRF NG+MVTCSK
Sbjct: 264 HTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSK 323
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
DRSIAVWDM S +I+LRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct: 324 DRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 383
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 384 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 443
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 444 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 474
Score = 385 (140.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 91/280 (32%), Positives = 146/280 (52%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD- 172
+D+ I+S D +IK+W+ S E ++ L GH + CLQY +R++V+GSSD+T+R D
Sbjct: 233 YDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDV 292
Query: 173 -EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+++++ H++ +L F N + + R + L +
Sbjct: 293 SSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLR--RVL---VGH 347
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
R+ V + +DD IVS D TIKVW + + ++ L GH + CLQY +R+++S
Sbjct: 348 RA----AVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVS 403
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------ 343
GSSD+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+ +
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 463
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
P R LV H V + FDE I+S+S D TI +W+
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 352 (129.0 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 80/270 (29%), Positives = 146/270 (54%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
L+ + + ++ V CLQYD+ IV+G D+T++VWD S + + L H +VL L++
Sbjct: 255 LECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC 314
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVN---TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
++++ S D ++ VWD+ + ++ L+ H AV + F + +V+ S DR+I VW
Sbjct: 315 NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 374
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
S E R L GH+ + + + ++ +VS S D TI++W+ +R L GH+ +
Sbjct: 375 -TSTCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 401 ACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAKRIV 451
C+++ ++ +VSG+ D I++WD++ CLR L H V ++FD +I+
Sbjct: 432 RCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 491
Query: 452 SGAYDGKIKVWNLV-----AALDPRAPTTT 476
S ++D I +W+ + D R+P+ T
Sbjct: 492 SSSHDDTILIWDFLNVSSNGQSDGRSPSRT 521
Score = 315 (115.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 88/295 (29%), Positives = 145/295 (49%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI----VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D ++SG DN+I+ D+ + V + H ++L L Y E I
Sbjct: 224 NSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLC---LQYDERVIVT 280
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
W + + +N +++ V L++ + +V+ +D +I VWD
Sbjct: 281 GSSDSTVRV-------WDVSSG--EVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWD 331
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
S I +VL GH +V + +D++ I+S S D T++VW +T E V TL H +
Sbjct: 332 MASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 391
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ + ++V+ S D +I +WD+ RVL GH V + FD K IVS + D
Sbjct: 392 ACLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 448
Query: 378 TIKVWNT---------SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ +S +RTL H + LQ+ + ++S S D+TI +WD
Sbjct: 449 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 285 (105.4 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR D
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 414
Score = 248 (92.4 bits), Expect = 5.0e-153, Sum P(2) = 5.0e-153
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ F EK++C + FD+WSE DQ++FVE+L++RMCHYQHGHIN+YLKPMLQRDF
Sbjct: 45 SRKRPSQGSFDKEKDLCIQLFDQWSESDQVEFVEHLIARMCHYQHGHINSYLKPMLQRDF 104
Query: 108 ISLLP 112
I+ LP
Sbjct: 105 ITALP 109
Score = 141 (54.7 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 39/82 (47%), Positives = 45/82 (54%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-D 172
FD K IVS + D IKVW+ + R CL R +V S R + D
Sbjct: 436 FDNKRIVSGAYDGKIKVWDLQAALDPRA----PASTLCL----RTLVEHSG-RVFRLQFD 486
Query: 173 EFQIVSSSHDDTILIWDFLNYS 194
EFQI+SSSHDDTILIWDFLN S
Sbjct: 487 EFQIISSSHDDTILIWDFLNVS 508
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 264/471 (56%), Positives = 329/471 (69%)
Query: 32 SSASPQLPPMTILYDPNRKKEPAP-QFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHY 90
+S + QL +++ + + +P + E + KWSE +Q+DF++ ++ R+ HY
Sbjct: 7 ASTTQQLADLSLTEGEHDEGKPLSIDYLQGHEGLIEEVLKWSEHEQLDFMDKIVHRLSHY 66
Query: 91 QHGHINTYLKPMLQRDFISLLP-NFDEKYIVSASGD--RTIKVWNTS-SCEFVRTLNGHK 146
Q G ++ +++PMLQRDFIS LP + E + + + D ++ + +TS C R H
Sbjct: 67 QLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLKSCEEVSTSWRCALAR--GQHW 124
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTIL-IWDFLNYSET--------- 196
+ + R + G S+ R D+F ++ S D ++ I + NY
Sbjct: 125 KKLIEKNVRSDSLWWGLSEK--RQWDKF--LNISRDMSVRRICEKFNYDVNIKRDKLDQL 180
Query: 197 ----PIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR 252
I+NNW+ G + + RINC+SENSKGVYCLQYDD KIVSGLR
Sbjct: 181 ILMHVFYSKLYPKIIRDIHNIDNNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLR 240
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
DNTIK+WDR C ++L+GHTGSVLCLQYD RVIISGSSD+TVRVWDV TGE + TLIH
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIH 300
Query: 313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVS 372
HCEAVLHLRF+NG+MVTCSKDRSIAVWDMVSP +IT+RRVLVGHRAAVNVVDFD++YIVS
Sbjct: 301 HCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVS 360
Query: 373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV 432
ASGDRTIKVW+ + EFVRTL GH+RGIACLQYR RLVVSGSSDNTIRLWDI G CLRV
Sbjct: 361 ASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRV 420
Query: 433 LEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
LEGHEELVRCIRFD KRIVSGAYDGKIKVW+L AALDPRA ++ +CL +LV
Sbjct: 421 LEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLV 471
Score = 372 (136.0 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 86/272 (31%), Positives = 147/272 (54%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS 276
W + RI S ++ V CLQYD+ I+SG D T++VWD + +CIK L H +
Sbjct: 247 WDRKDYSCSRI--LSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEA 304
Query: 277 VLCLQYDERVIISGSSDSTVRVWD-VNTGEMV--NTLIHHCEAVLHLRFSNGMMVTCSKD 333
VL L++ ++++ S D ++ VWD V+ ++ L+ H AV + F + +V+ S D
Sbjct: 305 VLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGD 364
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
R+I VW M + + R L GHR + + + + +VS S D TI++W+ S +R L
Sbjct: 365 RTIKVWSM---DTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVL 421
Query: 394 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIR 444
GH+ + C+++ ++ +VSG+ D I++WD++ CL L H V ++
Sbjct: 422 EGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 445 FDAKRIVSGAYDGKIKVWNLVAALDPRAPTTT 476
FD +IVS ++D I +W+ + A P++T
Sbjct: 482 FDDFQIVSSSHDDTILIWDFLDAPPSGLPSST 513
Score = 327 (120.2 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 96/295 (32%), Positives = 149/295 (50%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI--VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D +VSG DNTI+ R ++ + S H ++L L Y I
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLC---LQYDNRVI-I 276
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
+E + K L+ +C + V L++ + +V+ +D +I VWD
Sbjct: 277 SGSSDATVRVWDVETGECI-KTLIH--HCEA-----VLHLRFANGIMVTCSKDRSIAVWD 328
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
VS + I +VL GH +V + +D+R I+S S D T++VW ++T E V TL H +
Sbjct: 329 MVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI 388
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ ++V+ S D +I +WD+ S + LR VL GH V + FDEK IVS + D
Sbjct: 389 ACLQYRGRLVVSGSSDNTIRLWDIHSG--VCLR-VLEGHEELVRCIRFDEKRIVSGAYDG 445
Query: 378 TIKVWNTSSCEFVRTLNG---------HKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ + R L+ H + LQ+ D +VS S D+TI +WD
Sbjct: 446 KIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
FDEK IVS + D IKVW+ + R L+ + +Q+ R+ +++ D+
Sbjct: 433 FDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVF-------RLQF-DD 484
Query: 174 FQIVSSSHDDTILIWDFLN 192
FQIVSSSHDDTILIWDFL+
Sbjct: 485 FQIVSSSHDDTILIWDFLD 503
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 264/471 (56%), Positives = 329/471 (69%)
Query: 32 SSASPQLPPMTILYDPNRKKEPAP-QFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHY 90
+S + QL +++ + + +P + E + KWSE +Q+DF++ ++ R+ HY
Sbjct: 7 ASTTQQLADLSLTEGEHDEGKPLSIDYLQGHEGLIEEVLKWSEHEQLDFMDKIVHRLSHY 66
Query: 91 QHGHINTYLKPMLQRDFISLLP-NFDEKYIVSASGD--RTIKVWNTS-SCEFVRTLNGHK 146
Q G ++ +++PMLQRDFIS LP + E + + + D ++ + +TS C R H
Sbjct: 67 QLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLKSCEEVSTSWRCALAR--GQHW 124
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTIL-IWDFLNYSET--------- 196
+ + R + G S+ R D+F ++ S D ++ I + NY
Sbjct: 125 KKLIEKNVRSDSLWWGLSEK--RQWDKF--LNISRDMSVRRICEKFNYDVNIKRDKLDQL 180
Query: 197 ----PIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR 252
I+NNW+ G + + RINC+SENSKGVYCLQYDD KIVSGLR
Sbjct: 181 ILMHVFYSKLYPKIIRDIHNIDNNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLR 240
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
DNTIK+WDR C ++L+GHTGSVLCLQYD RVIISGSSD+TVRVWDV TGE + TLIH
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIH 300
Query: 313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVS 372
HCEAVLHLRF+NG+MVTCSKDRSIAVWDMVSP +IT+RRVLVGHRAAVNVVDFD++YIVS
Sbjct: 301 HCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVS 360
Query: 373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV 432
ASGDRTIKVW+ + EFVRTL GH+RGIACLQYR RLVVSGSSDNTIRLWDI G CLRV
Sbjct: 361 ASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRV 420
Query: 433 LEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
LEGHEELVRCIRFD KRIVSGAYDGKIKVW+L AALDPRA ++ +CL +LV
Sbjct: 421 LEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLV 471
Score = 372 (136.0 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 86/272 (31%), Positives = 147/272 (54%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS 276
W + RI S ++ V CLQYD+ I+SG D T++VWD + +CIK L H +
Sbjct: 247 WDRKDYSCSRI--LSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEA 304
Query: 277 VLCLQYDERVIISGSSDSTVRVWD-VNTGEMV--NTLIHHCEAVLHLRFSNGMMVTCSKD 333
VL L++ ++++ S D ++ VWD V+ ++ L+ H AV + F + +V+ S D
Sbjct: 305 VLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGD 364
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
R+I VW M + + R L GHR + + + + +VS S D TI++W+ S +R L
Sbjct: 365 RTIKVWSM---DTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVL 421
Query: 394 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIR 444
GH+ + C+++ ++ +VSG+ D I++WD++ CL L H V ++
Sbjct: 422 EGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 445 FDAKRIVSGAYDGKIKVWNLVAALDPRAPTTT 476
FD +IVS ++D I +W+ + A P++T
Sbjct: 482 FDDFQIVSSSHDDTILIWDFLDAPPSGLPSST 513
Score = 327 (120.2 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 96/295 (32%), Positives = 149/295 (50%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI--VSSSHDDTILIWDFLNYSETPIQX 200
+ +G+ CLQY D +VSG DNTI+ R ++ + S H ++L L Y I
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLC---LQYDNRVI-I 276
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
+E + K L+ +C + V L++ + +V+ +D +I VWD
Sbjct: 277 SGSSDATVRVWDVETGECI-KTLIH--HCEA-----VLHLRFANGIMVTCSKDRSIAVWD 328
Query: 261 RVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
VS + I +VL GH +V + +D+R I+S S D T++VW ++T E V TL H +
Sbjct: 329 MVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI 388
Query: 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR 377
L++ ++V+ S D +I +WD+ S + LR VL GH V + FDEK IVS + D
Sbjct: 389 ACLQYRGRLVVSGSSDNTIRLWDIHSG--VCLR-VLEGHEELVRCIRFDEKRIVSGAYDG 445
Query: 378 TIKVWNTSSCEFVRTLNG---------HKRGIACLQYRDRLVVSGSSDNTIRLWD 423
IKVW+ + R L+ H + LQ+ D +VS S D+TI +WD
Sbjct: 446 KIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
FDEK IVS + D IKVW+ + R L+ + +Q+ R+ +++ D+
Sbjct: 433 FDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVF-------RLQF-DD 484
Query: 174 FQIVSSSHDDTILIWDFLN 192
FQIVSSSHDDTILIWDFL+
Sbjct: 485 FQIVSSSHDDTILIWDFLD 503
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 541 (195.5 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 110/267 (41%), Positives = 164/267 (61%)
Query: 213 IENNWRMGKFLLQRINCRS----------ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
+++NWR G+FL+ N S VYC+QYDD +VSG +D T+ VWD
Sbjct: 190 LDSNWRHGRFLVSTFNNPSIRFPADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVN 249
Query: 263 SLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL 320
S + L GH+GSVLCL + R +++SGSSDST+ +WD + H + VL +
Sbjct: 250 SRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV 309
Query: 321 RFSNGMMVTCSKDRSIAVW--DMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGD 376
S +++ S+D + VW D SP E + VL GH A+VN V + K IV+AS D
Sbjct: 310 VVSENYIISSSRDHTARVWRLDATSPAEACMH-VLRGHLASVNSVQYSSKTGLIVTASSD 368
Query: 377 RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
RT++ W+ ++ +R ++ H+RGIAC QY + +VSGSSD TIR+++ G LR+L+GH
Sbjct: 369 RTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGH 428
Query: 437 EELVRCIRFDAKRIVSGAYDGKIKVWN 463
E+L+R +RF+ ++IVSG YDG +++WN
Sbjct: 429 EDLIRTVRFNDEKIVSGGYDGTVRIWN 455
Score = 350 (128.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 84/263 (31%), Positives = 142/263 (53%)
Query: 217 WRMG-KFLLQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGH 273
W + +F+L ++ +S V CL + + +VSG D+TI +WD + + +KV GH
Sbjct: 246 WDVNSRFILYKLY---GHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGH 302
Query: 274 TGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIH----HCEAVLHLRFSN--GMM 327
T +VL + E IIS S D T RVW ++ +H H +V +++S+ G++
Sbjct: 303 TDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLI 362
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC 387
VT S DR++ WD+ + + I R++ H+ + ++ K+IVS S D TI+++ SS
Sbjct: 363 VTASSDRTLRTWDITTGHCI---RIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSG 419
Query: 388 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRFD 446
+ +R L GH+ I +++ D +VSG D T+R+W+ G VL V ++FD
Sbjct: 420 KLLRMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFD 479
Query: 447 AKRIVSGAYDGKIKVWNLVAALD 469
+RI++ + +I VWN LD
Sbjct: 480 HRRIIACTHSSEILVWNFDDGLD 502
Score = 277 (102.6 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 84/315 (26%), Positives = 156/315 (49%)
Query: 89 HYQHGH--INTYLKPMLQ----RDFISLLPN-----FDEKYIVSASGDRTIKVWNTSSCE 137
+++HG ++T+ P ++ +DF + L + +D++ +VS S DRT+ VW+ +S
Sbjct: 193 NWRHGRFLVSTFNNPSIRFPADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRF 252
Query: 138 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI---RYRDEFQI-VSSSHDDTILIWDFL 191
+ L GH + CL + R L+VSGSSD+TI +++ + V H D +L +
Sbjct: 253 ILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVL---GV 309
Query: 192 NYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVS 249
SE I + + R + S NS +QY IV+
Sbjct: 310 VVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNS-----VQYSSKTGLIVT 364
Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNT 309
D T++ WD + CI+++ H + C QY+ + I+SGSSD T+R+++ ++G+++
Sbjct: 365 ASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRM 424
Query: 310 LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR-AAVNVVDFDEK 368
L H + + +RF++ +V+ D ++ +W+ + + VL R + V + FD +
Sbjct: 425 LQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQ---HCVLHNSRNSRVFGLQFDHR 481
Query: 369 YIVSASGDRTIKVWN 383
I++ + I VWN
Sbjct: 482 RIIACTHSSEILVWN 496
Score = 43 (20.2 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 73 EQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
E ++ID + +LL+ + + +++ +L DF + P
Sbjct: 38 ENNRIDLIRDLLASLSKEGVVAVYNHVRSLLFTDFTEVFP 77
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 471 (170.9 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 93/252 (36%), Positives = 146/252 (57%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 414 IDTNWRRGDLKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 472
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 473 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 532
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 533 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 589
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 590 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 649
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 650 GNADSTVKIWDI 661
Score = 448 (162.8 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 476 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 535
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 536 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 592
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 593 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 652
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 653 DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 704
Score = 376 (137.4 bits), Expect = 4.4e-46, Sum P(3) = 4.4e-46
Identities = 73/200 (36%), Positives = 118/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 517 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 576
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 577 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 633
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 634 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITS 693
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD+ G +R L
Sbjct: 694 SDDGTVKLWDLRTGEFIRNL 713
Score = 370 (135.3 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 506
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 507 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 556
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 557 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 616
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 617 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKH 676
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 677 QSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNL 713
Score = 336 (123.3 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 432 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 488
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 489 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 548
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 549 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 590
Score = 170 (64.9 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 640 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTV 699
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 700 KLWDLRTGEFIRNLV 714
Score = 132 (51.5 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 484 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 540
Score = 112 (44.5 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 524 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 580
Score = 97 (39.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 562 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 620
Score = 86 (35.3 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 36/146 (24%), Positives = 65/146 (44%)
Query: 4 LYDPNRKK---EPAPQ---FASEKEMCPYLTISVSSAS-PQLPPMTILYDPNRKKEPAPQ 56
L PNR K + P+ F + K+ CP T A+ L + P R++ + Q
Sbjct: 224 LRSPNRMKRKLDHGPEVRSFTTGKKPCPSPTGQQYPATFGDLRAVNGQV-PQRRRITSIQ 282
Query: 57 FASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE 116
+ + + F WS +++ ++ L+ Q H+ ++P QRDFISLLP
Sbjct: 283 PPTGLQEWLRTFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPRELA 342
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTL 142
+++S + + + +C + R L
Sbjct: 343 LHVLSFLEPKDL-LQAAQTCRYWRIL 367
Score = 74 (31.1 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + + L GH I CLQ+ +VSGS DNT++
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 457
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 473 (171.6 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 93/252 (36%), Positives = 147/252 (58%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G+ ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 241 IDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 299
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 300 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 359
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 360 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 416
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 417 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 476
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 477 GNADSTVKIWDI 488
Score = 448 (162.8 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 303 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 362
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 363 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 419
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 420 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 479
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 531
Score = 377 (137.8 bits), Expect = 6.9e-42, Sum P(2) = 6.9e-42
Identities = 73/200 (36%), Positives = 119/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 344 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 403
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 404 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 460
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 461 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 520
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD++ G +R L
Sbjct: 521 SDDGTVKLWDLKTGEFIRNL 540
Score = 371 (135.7 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 333
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 334 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 383
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 384 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 443
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 444 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 503
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 504 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 540
Score = 336 (123.3 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 259 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 315
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 316 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 375
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 376 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 417
Score = 170 (64.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 467 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 526
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 527 KLWDLKTGEFIRNLV 541
Score = 132 (51.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 311 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 367
Score = 112 (44.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 351 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 407
Score = 97 (39.2 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 389 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 447
Score = 90 (36.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 66 KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
K F WS +++ ++ L+ Q H+ ++P QRDFISLLP Y++S
Sbjct: 119 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 178
Query: 126 RTIKVWNTSSCEFVRTL 142
R + + +C + R L
Sbjct: 179 RDL-LQAAQTCRYWRIL 194
Score = 74 (31.1 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + + L GH I CLQ+ +VSGS DNT++
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 284
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 473 (171.6 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 93/252 (36%), Positives = 147/252 (58%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G+ ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 283 IDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 342 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 402 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 458
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 459 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 518
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 519 GNADSTVKIWDI 530
Score = 448 (162.8 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 345 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 404
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 461
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 462 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 521
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Score = 377 (137.8 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 73/200 (36%), Positives = 119/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 386 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 445
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 446 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 502
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 503 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITS 562
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD++ G +R L
Sbjct: 563 SDDGTVKLWDLKTGEFIRNL 582
Score = 372 (136.0 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 375
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 376 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 425
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 426 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 485
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 486 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 336 (123.3 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 301 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 357
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 358 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 417
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 418 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 459
Score = 170 (64.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 509 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTV 568
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 569 KLWDLKTGEFIRNLV 583
Score = 132 (51.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 409
Score = 112 (44.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 449
Score = 97 (39.2 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 431 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 489
Score = 87 (35.7 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 66 KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
K F WS +++ ++ L+ Q H+ ++P QRDFISLLP Y++S
Sbjct: 161 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 220
Query: 126 RTIKVWNTSSCEFVRTL 142
+ + + +C + R L
Sbjct: 221 KDL-LQAAQTCRYWRIL 236
Score = 74 (31.1 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + + L GH I CLQ+ +VSGS DNT++
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 326
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 473 (171.6 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 93/252 (36%), Positives = 147/252 (58%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G+ ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 283 IDTNWRRGELRSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 341
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 342 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 401
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 402 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 458
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 459 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 518
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 519 GNADSTVKIWDI 530
Score = 448 (162.8 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 345 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 404
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 461
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 462 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 521
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Score = 377 (137.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 73/200 (36%), Positives = 119/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 386 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 445
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 446 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 502
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 503 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITS 562
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD++ G +R L
Sbjct: 563 SDDGTVKLWDLKTGEFIRNL 582
Score = 372 (136.0 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 375
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 376 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 425
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 426 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 485
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 486 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 336 (123.3 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 301 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 357
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 358 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 417
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 418 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 459
Score = 170 (64.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 509 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTV 568
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 569 KLWDLKTGEFIRNLV 583
Score = 132 (51.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 409
Score = 112 (44.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 449
Score = 97 (39.2 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 431 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 489
Score = 87 (35.7 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 66 KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
K F WS +++ ++ L+ Q H+ ++P QRDFISLLP Y++S
Sbjct: 161 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 220
Query: 126 RTIKVWNTSSCEFVRTL 142
+ + + +C + R L
Sbjct: 221 KDL-LQAAQTCRYWRIL 236
Score = 73 (30.8 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + L GH I CLQ+ +VSGS DNT++
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 326
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 473 (171.6 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 93/252 (36%), Positives = 147/252 (58%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G+ ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 281 IDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 339
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 340 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 399
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 400 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 456
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 457 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 516
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 517 GNADSTVKIWDI 528
Score = 448 (162.8 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 343 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 402
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 403 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 459
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 460 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 519
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 571
Score = 377 (137.8 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 73/200 (36%), Positives = 119/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 384 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 443
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 444 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 500
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 501 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 560
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD++ G +R L
Sbjct: 561 SDDGTVKLWDLKTGEFIRNL 580
Score = 371 (135.7 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 373
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 374 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 423
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 424 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 483
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 484 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 543
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 544 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 580
Score = 336 (123.3 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 299 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 355
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 356 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 415
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 416 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 457
Score = 170 (64.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 507 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 566
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 567 KLWDLKTGEFIRNLV 581
Score = 132 (51.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 351 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 407
Score = 112 (44.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 391 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 447
Score = 97 (39.2 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 429 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 487
Score = 87 (35.7 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 66 KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
K F WS +++ ++ L+ Q H+ ++P QRDFISLLP Y++S
Sbjct: 159 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 218
Query: 126 RTIKVWNTSSCEFVRTL 142
+ + + +C + R L
Sbjct: 219 KDL-LQAAQTCRYWRIL 234
Score = 74 (31.1 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + + L GH I CLQ+ +VSGS DNT++
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 324
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 473 (171.6 bits), Expect = 8.7e-52, Sum P(2) = 8.7e-52
Identities = 93/252 (36%), Positives = 147/252 (58%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G+ ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 361 IDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 419
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 420 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 479
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 480 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 536
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 537 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 596
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 597 GNADSTVKIWDI 608
Score = 448 (162.8 bits), Expect = 8.5e-49, Sum P(2) = 8.5e-49
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 423 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 482
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 483 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 539
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 540 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 599
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 651
Score = 377 (137.8 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 73/200 (36%), Positives = 119/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 464 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 523
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 524 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 580
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 581 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 640
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD++ G +R L
Sbjct: 641 SDDGTVKLWDLKTGEFIRNL 660
Score = 371 (135.7 bits), Expect = 4.4e-40, Sum P(2) = 4.4e-40
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 453
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 454 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 503
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 504 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 563
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 564 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 623
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 624 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 660
Score = 336 (123.3 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 379 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 435
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 436 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 495
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 496 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 537
Score = 170 (64.9 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 587 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 646
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 647 KLWDLKTGEFIRNLV 661
Score = 132 (51.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 431 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 487
Score = 112 (44.5 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 471 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 527
Score = 97 (39.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 509 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 567
Score = 87 (35.7 bits), Expect = 8.7e-52, Sum P(2) = 8.7e-52
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 66 KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
K F WS +++ ++ L+ Q H+ ++P QRDFISLLP Y++S
Sbjct: 239 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 298
Query: 126 RTIKVWNTSSCEFVRTL 142
+ + + +C + R L
Sbjct: 299 KDL-LQAAQTCRYWRIL 314
Score = 74 (31.1 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + + L GH I CLQ+ +VSGS DNT++
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 404
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 473 (171.6 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 93/252 (36%), Positives = 147/252 (58%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I+ NWR G+ ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 366 IDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 424
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q + +IISGS+D T++VW+ TGE ++TL H V + +V+ S+
Sbjct: 425 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 484
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VL+GH AAV V +D + +VS + D +KVW+ + + T
Sbjct: 485 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 541
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C+ L GH+ L + +VS
Sbjct: 542 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 601
Query: 453 GAYDGKIKVWNL 464
G D +K+W++
Sbjct: 602 GNADSTVKIWDI 613
Score = 448 (162.8 bits), Expect = 9.4e-49, Sum P(2) = 9.4e-49
Identities = 83/232 (35%), Positives = 144/232 (62%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q D+ I+SG D T+KVW+ + +CI L GHT +V C+ E+ ++SGS D+T
Sbjct: 428 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 487
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ TG+ ++ L+ H AV +++ +V+ + D + VWD P T L G
Sbjct: 488 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---PETETCLHTLQG 544
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + + TL GH+ + ++ +D ++VSG++
Sbjct: 545 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 604
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI+ G CL+ L+G H+ V C++F+ +++ + DG +K+W+L
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 656
Score = 377 (137.8 bits), Expect = 9.9e-41, Sum P(2) = 9.9e-41
Identities = 73/200 (36%), Positives = 119/200 (59%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+ + ++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V
Sbjct: 469 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 528
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD T ++TL H V L+F +V+ S D SI VWD+ + N I L GH
Sbjct: 529 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 585
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSG 413
++ + ++ + +VS + D T+K+W+ + + ++TL G H+ + CLQ+ V++
Sbjct: 586 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 645
Query: 414 SSDNTIRLWDIECGACLRVL 433
S D T++LWD++ G +R L
Sbjct: 646 SDDGTVKLWDLKTGEFIRNL 665
Score = 371 (135.7 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 81/277 (29%), Positives = 147/277 (53%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY--RDEFQI 176
IVS S D T+KVW+ + + +RTL GH G+ Q RD +++SGS+D T++ + +
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 458
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + + T + ++ E + IE Q ++ +
Sbjct: 459 IHTLYGHTSTV-RCMHLHEKRV-VSGSRDATLRVWDIETG--------QCLHVLMGHVAA 508
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D+++
Sbjct: 509 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 568
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + + H
Sbjct: 569 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 628
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
++AV + F++ +++++S D T+K+W+ + EF+R L
Sbjct: 629 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 665
Score = 336 (123.3 bits), Expect = 8.9e-34, Sum P(2) = 8.9e-34
Identities = 70/171 (40%), Positives = 96/171 (56%)
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L+F +V+ S D ++ VW V+ + R LVGH V + I+
Sbjct: 384 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQMRDNIII 440
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R+WDIE G CL
Sbjct: 441 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 500
Query: 432 VLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
VL GH VRC+++D +R+VSGAYD +KVW+ P T CL TL
Sbjct: 501 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD---------PETETCLHTL 542
Score = 170 (64.9 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYDERVIISGSSDSTV 296
++ D+ +VSG D+T+K+WD + QC++ L G H +V CLQ+++ +I+ S D TV
Sbjct: 592 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 651
Query: 297 RVWDVNTGEMVNTLI 311
++WD+ TGE + L+
Sbjct: 652 KLWDLKTGEFIRNLV 666
Score = 132 (51.5 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ I+S S DRT+KVWN + E + TL GH + C+ ++ VVSGS D T+R D
Sbjct: 436 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 492
Score = 112 (44.5 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
EK +VS S D T++VW+ + + + L GH + C+QY R VVSG+ D ++ D
Sbjct: 476 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 532
Score = 97 (39.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+D + +VS + D +KVW+ + + TL GH + LQ+ VVSGS D +IR D
Sbjct: 514 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD 572
Score = 87 (35.7 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 66 KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
K F WS +++ ++ L+ Q H+ ++P QRDFISLLP Y++S
Sbjct: 244 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 303
Query: 126 RTIKVWNTSSCEFVRTL 142
+ + + +C + R L
Sbjct: 304 KDL-LQAAQTCRYWRIL 319
Score = 74 (31.1 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIR 169
W + + L GH I CLQ+ +VSGS DNT++
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 409
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 478 (173.3 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 103/270 (38%), Positives = 151/270 (55%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE NWR ++ + + + CLQ+ ++IVSG DNT+KVW V+ +C++ L G
Sbjct: 975 IEMNWRSRPVRKPKV-LKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVG 1033
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HTG V Q +IISGS+D T++VWD+++G V+TL H V + +V+ S+
Sbjct: 1034 HTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSR 1093
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
D ++ VWD+ + + VLVGH AAV V +D K IVS + D +K+W+ E + T
Sbjct: 1094 DATLRVWDI---EQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHT 1150
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
L GH + LQ+ VVSGS D +IR+WD+E G C L GH+ L + +VS
Sbjct: 1151 LQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVS 1210
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
G D +KVW++ TT CL+TL
Sbjct: 1211 GNADSTVKVWDI---------TTGQCLQTL 1231
Score = 409 (149.0 bits), Expect = 4.4e-48, Sum P(3) = 4.4e-48
Identities = 78/232 (33%), Positives = 134/232 (57%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
GV+ Q + I+SG D T+KVWD S C+ L GHT +V C+ ++SGS D+T
Sbjct: 1037 GVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDAT 1096
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+RVWD+ G ++ L+ H AV +++ ++V+ + D + +W P L G
Sbjct: 1097 LRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWH---PERQECLHTLQG 1153
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H V + FD ++VS S D +I+VW+ + TL GH+ + ++ R ++VSG++
Sbjct: 1154 HTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNA 1213
Query: 416 DNTIRLWDIECGACLRVLEG---HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D+T+++WDI G CL+ L G H V C++F+++ +V+ + DG +K+W++
Sbjct: 1214 DSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDV 1265
Score = 399 (145.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 94/307 (30%), Positives = 155/307 (50%)
Query: 131 WNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWD 189
W + + L GH I CLQ+ +VSGS DNT++ + V+ T++
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKV---WSAVNGKCLRTLVGHT 1035
Query: 190 FLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS 249
+S Q W M ++ ++ V C+ K+VS
Sbjct: 1036 GGVWSS---QMSGNIIISGSTDRTLKVWDMDSGAC--VHTLQGHTSTVRCMHLHGSKVVS 1090
Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNT 309
G RD T++VWD C+ VL GH +V C+QYD ++I+SG+ D V++W E ++T
Sbjct: 1091 GSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHT 1150
Query: 310 LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY 369
L H V L+F +V+ S D SI VWD+ + N + L+GH++ + ++ +
Sbjct: 1151 LQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGN---CKHTLMGHQSLTSGMELRQNI 1207
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426
+VS + D T+KVW+ ++ + ++TL+G H + CLQ+ R VV+ S D T++LWD++
Sbjct: 1208 LVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKT 1267
Query: 427 GACLRVL 433
G +R L
Sbjct: 1268 GDFIRNL 1274
Score = 292 (107.8 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 66/208 (31%), Positives = 116/208 (55%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V C+QYD IVSG D +K+W +C+ L GHT V LQ+D ++SGS D+++
Sbjct: 1118 VRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSI 1177
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWDV TG +TL+ H + ++V+ + D ++ VWD+ + + H
Sbjct: 1178 RVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKH 1237
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL----NGHKRGIAC-LQYRD-RLV 410
+AV + F+ +++V++S D T+K+W+ + +F+R L +G G+ ++ D +L+
Sbjct: 1238 HSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLI 1297
Query: 411 VS-GSSDNT--IRL----WDIECGACLR 431
+ GS + T +L +D+E GAC++
Sbjct: 1298 CAVGSRNGTEETKLMVLDFDVE-GACVK 1324
Score = 139 (54.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
+D K IVS + D +K+W+ E + TL GH + LQ+ VVSGS D +IR D
Sbjct: 1123 YDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWD- 1181
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM--GKFLLQRINCRS 231
+ + H T++ L Q + W + G+ LQ ++ +
Sbjct: 1182 VETGNCKH--TLMGHQSLTSGMELRQNILVSGNADSTVKV---WDITTGQ-CLQTLSGPN 1235
Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
++ V CLQ++ +V+ D T+K+WD
Sbjct: 1236 KHHSAVTCLQFNSRFVVTSSDDGTVKLWD 1264
Score = 119 (46.9 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
I+S S DRT+KVW+ S V TL GH + C+ VVSGS D T+R D
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWD 1101
Score = 115 (45.5 bits), Expect = 4.4e-48, Sum P(3) = 4.4e-48
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 165
D + F IVS S D T+KVW+ + + +RTL GH G+ Q +++SGS+D
Sbjct: 995 DHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTD 1054
Query: 166 NTIRYRD 172
T++ D
Sbjct: 1055 RTLKVWD 1061
Score = 101 (40.6 bits), Expect = 8.2e-33, Sum P(3) = 8.2e-33
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
+VS S D T++VW+ + L GH + C+QY +L+VSG+ D ++
Sbjct: 1088 VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVK 1138
Score = 85 (35.0 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 26 YLTISV-SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLL 84
+LT S SA + P ++ P+R P P E + F +WS +++ ++ L+
Sbjct: 817 HLTSSTPGSALGRRTPRSV---PSRDNPP-P----ELQHWLAQFQRWSHVERLLALDRLI 868
Query: 85 SRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVS 121
Q H+ ++P QRDFISLLP +++S
Sbjct: 869 DHCDPSQVRHMMKVIEPQFQRDFISLLPRELALFVLS 905
Score = 45 (20.9 bits), Expect = 4.4e-48, Sum P(3) = 4.4e-48
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 39 PPMTILY-DPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLS 85
PP+ L D + +EP P+ E+E+ D+ ++D +D V +S
Sbjct: 158 PPVVCLINDDDDDEEPEPEEDDEEELIE---DE--DEDAVDIVTGAIS 200
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 360 (131.8 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 80/232 (34%), Positives = 129/232 (55%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDS 294
GV+ + D+ +VSG D ++VW+ + + I +L GHT +V CL+ D+ ISGS D+
Sbjct: 294 GVWAMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDT 353
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
T+R+WD+ TG + L+ H +V L ++V+ S D + VW + +E R L
Sbjct: 354 TLRIWDLRTGTCRSVLVGHQASVRCLAVHGDIVVSGSYDTTARVWSI---SEGRFLRALS 410
Query: 355 GHRAAVNVVDFDEKYIVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH + + + FD + I + S D ++++W NT C + L GH + LQ +V+
Sbjct: 411 GHFSQIYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAI--LQGHTSLVGQLQMSGDTLVT 468
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
G SD ++R+W + A + L H+ V ++FD RIVSG DG++KVW L
Sbjct: 469 GGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCL 520
Score = 347 (127.2 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 83/253 (32%), Positives = 132/253 (52%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
IE+ W G QR S + V L IV+ L + I V+D + + K L G
Sbjct: 234 IESAWSKGGRCTQRHI--SPDQGVVTSLHLTPKYIVASLDNAKIHVYD-TNGENQKTLEG 290
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCS 331
H V + + +++SG D VRVW++ TGE + L H V L+ S+ ++ S
Sbjct: 291 HVMGVWAMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGS 350
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
+D ++ +WD+ + T R VLVGH+A+V + +VS S D T +VW+ S F+R
Sbjct: 351 RDTTLRIWDLRTG---TCRSVLVGHQASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLR 407
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV 451
L+GH I + + R + +GS D ++R+WD G C +L+GH LV ++ +V
Sbjct: 408 ALSGHFSQIYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDTLV 467
Query: 452 SGAYDGKIKVWNL 464
+G DG ++VW+L
Sbjct: 468 TGGSDGSVRVWSL 480
Score = 330 (121.2 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 68/231 (29%), Positives = 116/231 (50%)
Query: 237 VYCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
V CL+ D + +SG RD T+++WD + C VL GH SV CL +++SGS D+T
Sbjct: 335 VRCLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDIVVSGSYDTT 394
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
RVW ++ G + L H + + F + T S D S+ +WD PN +L G
Sbjct: 395 ARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGSLDTSVRIWD---PNTGQCHAILQG 451
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H + V + +V+ D +++VW+ + + L H + LQ+ + +VSG S
Sbjct: 452 HTSLVGQLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGS 511
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDGK--IKVWN 463
D +++W + G LR L + V + F+ K ++ + G+ ++VW+
Sbjct: 512 DGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVWS 562
Score = 148 (57.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 52/189 (27%), Positives = 88/189 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD----EF 174
+VS S D T +VW+ S F+R L+GH I + + R + +GS D ++R D +
Sbjct: 386 VVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGSLDTSVRIWDPNTGQC 445
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFL-LQRINCRSEN 233
+ H T L+ +T + W + + + R+ +N
Sbjct: 446 HAILQGH--TSLVGQLQMSGDTLVTGGSDGSVRV--------WSLTRMAPIHRLAAH-DN 494
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGS 291
S V LQ+D+++IVSG D +KVW + Q ++ L+ + +V + ++E VI+S
Sbjct: 495 S--VTSLQFDNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSR 552
Query: 292 SDSTV-RVW 299
S TV VW
Sbjct: 553 SGRTVMEVW 561
Score = 147 (56.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 36/112 (32%), Positives = 53/112 (47%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVW 299
LQ +V+G D +++VW + I L H SV LQ+D I+SG SD V+VW
Sbjct: 459 LQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVW 518
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK--DRSIA-VWDMVSPNEIT 348
+ TG+++ L + V + F V S R++ VW P E T
Sbjct: 519 CLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVWSFSPPPEDT 570
Score = 107 (42.7 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRYRD 172
+ +VS DR ++VWN ++ E + L GH + CL+ D+ +SGS D T+R D
Sbjct: 302 DNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWD 359
Score = 99 (39.9 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 115 DEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
D+ +S S D T+++W+ T +C V L GH+ + CL +VVSGS D T R
Sbjct: 342 DKNTAISGSRDTTLRIWDLRTGTCRSV--LVGHQASVRCLAVHGDIVVSGSYDTTAR 396
Score = 82 (33.9 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
KYIV++ + I V++T+ E +TL GH G+ + D ++VSG D +R
Sbjct: 264 KYIVASLDNAKIHVYDTNG-ENQKTLEGHVMGVWAMVPWDNILVSGGCDREVR 315
Score = 61 (26.5 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 20/98 (20%), Positives = 45/98 (45%)
Query: 19 SEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCF----KYFDKWSEQ 74
S+K C + ++ ++P PP ++ P+ + ++E K+F+ S
Sbjct: 11 SDKP-CTSIPPNLLPSAPASPPTPAPSPTPHQRLPSWRAPEQEEDALLLNTKFFESLSGP 69
Query: 75 DQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
+ ++E +LS Q +++Y+ P L++D + P
Sbjct: 70 RRQQYLEAILSLCSSQQLSFVSSYVAPRLRKDPFRVFP 107
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 421 (153.3 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 95/252 (37%), Positives = 139/252 (55%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
+E NWR G+ R S +S GV CLQ + + SG D TI++W+ + Q + +L G
Sbjct: 255 VECNWRHGRC---RQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEG 311
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
H+ V CLQ+D+ +ISGS D T+R+W+ T E ++ L H ++VL L F + ++V+ S
Sbjct: 312 HSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSA 371
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV 390
D ++ +W ITLR GH VN V D ++S S D TIK+W+ + +
Sbjct: 372 DCTVKLWHFSGGKRITLR----GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCL 427
Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI 450
T + H + L D + S S D TI+ WDIE C+ L GH E V I D R+
Sbjct: 428 HTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRL 487
Query: 451 VSGAYDGKIKVW 462
+SGA+DG +KVW
Sbjct: 488 ISGAHDGVVKVW 499
Score = 373 (136.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 82/248 (33%), Positives = 134/248 (54%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS 276
W + F Q++ +S GV CLQ+D K++SG D TI++W+ + +CI +L GHT S
Sbjct: 298 WNLATF--QQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDS 355
Query: 277 VLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDR 334
VLCL +D +++SGS+D TV++W + G+ + TL H V +R G++++ S D
Sbjct: 356 VLCLTFDSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDS 414
Query: 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
+I +W + + N T H V + + + S S D TIK W+ + V TL
Sbjct: 415 TIKIWSLET-N--TCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLF 471
Query: 395 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA 454
GH G+ + ++SG+ D +++W+ C C+ L+ H E V + +VSG+
Sbjct: 472 GHIEGVWEIAADHLRLISGAHDGVVKVWEA-C-ECVHTLKNHSEPVTSVALGDCEVVSGS 529
Query: 455 YDGKIKVW 462
DGKI +W
Sbjct: 530 EDGKIYLW 537
Score = 316 (116.3 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 69/198 (34%), Positives = 113/198 (57%)
Query: 269 VLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMV 328
VL+GH+ V+CLQ ++ SGS D+T+R+W++ T + V L H V L+F ++
Sbjct: 268 VLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI 327
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE 388
+ S D++I +W+ + I+ +L GH +V + FD +VS S D T+K+W+ S +
Sbjct: 328 SGSMDKTIRIWNYRTSECIS---ILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGK 384
Query: 389 FVRTLNGHKRGIACLQY-RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 446
+ TL GH + ++ RDR LV+SGS D+TI++W +E CL H V+ +
Sbjct: 385 RI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA 443
Query: 447 AKRIVSGAYDGKIKVWNL 464
R+ S + DG IK W++
Sbjct: 444 DSRLFSCSLDGTIKQWDI 461
Score = 254 (94.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 89/336 (26%), Positives = 144/336 (42%)
Query: 51 KEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISL 110
K P+P S+ + FK W E + E C+++HG + D +
Sbjct: 226 KPPSPNSDSKFFLPFKT-RPWKEV----YAERCRVE-CNWRHGRCRQVVLSG-HSDGVMC 278
Query: 111 LPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR- 169
L + S S D TI++WN ++ + V L GH G+ CLQ+ ++SGS D TIR
Sbjct: 279 L-QLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRI 337
Query: 170 --YR-DEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR 226
YR E + H D++L L + T + ++ GK + R
Sbjct: 338 WNYRTSECISILHGHTDSVLC---LTFDSTLLVSGSADCTVKLW-----HFSGGKRITLR 389
Query: 227 INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV 286
+ NS V ++ D ++SG D+TIK+W + C+ + H G V L +
Sbjct: 390 GHTGPVNS--VRIIR-DRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSR 446
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE 346
+ S S D T++ WD+ + V+TL H E V + + +++ + D + VW+ E
Sbjct: 447 LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEAC---E 503
Query: 347 ITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
L H V V + +VS S D I +W
Sbjct: 504 CV--HTLKNHSEPVTSVALGDCEVVSGSEDGKIYLW 537
Score = 166 (63.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 49/192 (25%), Positives = 91/192 (47%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDR-LVVSGSSDNTIRYR 171
FD +VS S D T+K+W+ S + + TL GH + ++ RDR LV+SGS D+TI+
Sbjct: 361 FDSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIK-- 417
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR-INCR 230
+ S +T L + P+Q ++ + ++ ++
Sbjct: 418 -----IWSLETNTCL--HTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTL 470
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
+ +GV+ + D +++SG D +KVW+ + +C+ L H+ V + + ++SG
Sbjct: 471 FGHIEGVWEIAADHLRLISGAHDGVVKVWE--ACECVHTLKNHSEPVTSVALGDCEVVSG 528
Query: 291 SSDSTVRVWDVN 302
S D + +W N
Sbjct: 529 SEDGKIYLWLFN 540
Score = 37 (18.1 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 99 LKPMLQRDFISLLP 112
L +++ DF+SLLP
Sbjct: 101 LDSLVRLDFLSLLP 114
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 358 (131.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 80/239 (33%), Positives = 133/239 (55%)
Query: 237 VYCLQYDDHKIV--SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD---ERVIISGS 291
+ CL ++ V +G D T K+WD S + + LTGH ++ L +D +R II+GS
Sbjct: 180 IVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR-IITGS 238
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITL 349
D TV VWD +TG V+TLI HC + FS +++T S D++ +WD S +
Sbjct: 239 FDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA- 297
Query: 350 RRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
L GH + + D+ K I +AS D T +V+N ++ + + L GH+ I+ + +
Sbjct: 298 --TLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 408 R--LVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRC-IRFDAKRIVSGAYDGKIKVW 462
+ +++GSSD T R+WD++ G CL+VLEGH +E+ C + +++G+ D ++W
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 341 (125.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 73/233 (31%), Positives = 130/233 (55%)
Query: 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVW 299
Y D KI +G D T K+W + +C GHT ++CL ++ + V+ +GS D+T ++W
Sbjct: 146 YGD-KIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLW 204
Query: 300 DVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D+ +GE V TL H ++ L F S ++T S D ++ VWD + ++ L+GH
Sbjct: 205 DIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV---HTLIGHC 261
Query: 358 AAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSG 413
A ++ + +D I++ S D+T +W+ +S + V TL GH I +C Y +L+ +
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVWNL 464
S+D T R+++ C+ LEGHE + I F+ + R+++G+ D ++W++
Sbjct: 322 SADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Score = 293 (108.2 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 72/227 (31%), Positives = 113/227 (49%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTG 304
++G D T KVWD S + + L GH V + ++ I +GS D T ++W TG
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ +T H ++ L F+ + ++ T S D + +WD+ S E+ L GH A +
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVV---TLTGHLAEIIS 224
Query: 363 VDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNT 418
+ FD I++ S D T+ VW+ S+ V TL GH I A + L+++GS D T
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKT 284
Query: 419 IRLWDIECGACLRVLEGHEE--LVRCIRFDAKRIVSGAYDGKIKVWN 463
LWD G C+ L GH++ L C + K I + + DG +V+N
Sbjct: 285 CMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYN 331
Score = 210 (79.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 64/208 (30%), Positives = 100/208 (48%)
Query: 268 KVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN- 324
KVL H + + L I+GS D T +VWD +GE ++TL H V + F+N
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 325 --GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIK 380
+ T S D++ +W S GH A + + F+ + V A+G D T K
Sbjct: 146 YGDKIATGSFDKTCKLW---SAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAK 202
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGH- 436
+W+ S E V TL GH I L + DR +++GS D+T+ +WD G + L GH
Sbjct: 203 LWDIQSGEEVVTLTGHLAEIISLSFDTSGDR-IITGSFDHTVVVWDASTGRKVHTLIGHC 261
Query: 437 EELVRCI-RFDAKRIVSGAYDGKIKVWN 463
E+ + +D I++G+ D +W+
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLWD 289
Score = 170 (64.9 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 62/272 (22%), Positives = 108/272 (39%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRYRDEFQIV 177
I + S D+T K+W+ + + T GH I CL + + VV+ S +T + Q
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ-- 207
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRINCRSENSK 235
S + L W G+ + I +E S
Sbjct: 208 -SGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISS 266
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSD 293
++ +D I++G D T +WD S +C+ LTGH +L C Y ++I + S+D
Sbjct: 267 ALF--SWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
T RV++ T + + L H + + F+ G + A V + +V
Sbjct: 325 GTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCL--QV 382
Query: 353 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
L GH + F+ K +++ S D + ++W
Sbjct: 383 LEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/202 (28%), Positives = 94/202 (46%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGS 163
+ ISL + I++ S D T+ VW+ S+ V TL GH I A + L+++GS
Sbjct: 221 EIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGS 280
Query: 164 SDNTIRYRDEF--QIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM 219
D T D + V++ HDD IL F +Y+ I N
Sbjct: 281 MDKTCMLWDATSGKCVATLTGHDDEILDSCF-DYTGKLIATASADGTARVY-----NATT 334
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL- 278
K + + E SK + Q +++++G D T ++WD + QC++VL GHT +
Sbjct: 335 RKCITKLEGHEGEISKISFNPQ--GNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFS 392
Query: 279 C-LQYDERVIISGSSDSTVRVW 299
C Y ++I+GS D++ R+W
Sbjct: 393 CAFNYKGNIVITGSKDNSCRIW 414
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIRLWDIEC 426
++ S DRT KVW+T+S E + TL GH+ + + Y D+ + +GS D T +LW E
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWSAET 166
Query: 427 GACLRVLEGHEELVRCIRFDAKRIV--SGAYDGKIKVWNL 464
G C GH + C+ F+ + V +G+ D K+W++
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI 206
Score = 95 (38.5 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 91 QHGHINTYLKPMLQRDFISLLP---NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
QH N YL +L+ + L N ++ S DRT KVW+T+S E + TL GH+
Sbjct: 76 QHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRN 135
Query: 148 GIACLQ----YRDRLVVSGSSDNTIR 169
+ + Y D+ + +GS D T +
Sbjct: 136 VVYAIAFNNPYGDK-IATGSFDKTCK 160
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 433 (157.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 113/364 (31%), Positives = 189/364 (51%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D K +VS S D T+K+W+ ++ E ++TL+GH + L + +L+ SGS DNTI D
Sbjct: 761 DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD 820
Query: 173 EF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR-INC 229
+++ + IW + + P I W + LQ+ ++
Sbjct: 821 SATGELLQTFEGHPHSIW---SVAFAPDGKELASASDDSTIKI---WDLATGELQQTLDS 874
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVI 287
S++ + V D + S D+TIKVW+ + + + L G +G V + + D + +
Sbjct: 875 HSQSVRSV-AFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKL 933
Query: 288 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPN 345
SGS +TV++W+ TGE++ TL H ++V + FS +G + + S D +I +W+ +
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE 993
Query: 346 EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
L++ GH + V F D K++VS S D TIK+W+ ++ E ++L H R + +
Sbjct: 994 ---LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAV 1050
Query: 404 QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKI 459
+ D+ + S S D+TI+LWD G R LEGH + VR + F D K + S +YDG I
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTI 1110
Query: 460 KVWN 463
K+WN
Sbjct: 1111 KLWN 1114
Score = 403 (146.9 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 111/365 (30%), Positives = 186/365 (50%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D K + S S D TI +W++++ E ++T GH I + + + + S S D+TI+ D
Sbjct: 803 DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Query: 173 ----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E Q SH ++ F +P + N G+ L Q +
Sbjct: 863 LATGELQQTLDSHSQSVRSVAF-----SPDGKLLASSSLDSTIKVWNP-ATGE-LQQSLE 915
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
RS K V D K+ SG NT+K+W+ + + ++ L GH+ SV + + D +
Sbjct: 916 GRSGWVKSV-AFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ 974
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSP 344
+ S SSD+T+++W+ TGE+ T H + + FS +G +V+ S D +I +WD+ +
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
L++ L H +V+ V F D+K + S+S D TIK+W++++ E RTL GH +G+
Sbjct: 1035 E---LQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRS 1091
Query: 403 LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGK 458
+ + +L+ S S D TI+LW+ G + L G + V + F D K++ SG YD
Sbjct: 1092 VTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDST 1151
Query: 459 IKVWN 463
IK+W+
Sbjct: 1152 IKLWD 1156
Score = 347 (127.2 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 82/255 (32%), Positives = 138/255 (54%)
Query: 223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
LLQ ++ S + + D + SG DNTI +WD + + ++ GH S+ + +
Sbjct: 784 LLQTLDGHSGTVESL-AFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAF 842
Query: 283 --DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAV 338
D + + S S DST+++WD+ TGE+ TL H ++V + FS +G ++ + S D +I V
Sbjct: 843 APDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV 902
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
W+ P L++ L G V V F D K + S S T+K+WN ++ E ++TL GH
Sbjct: 903 WN---PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGH 959
Query: 397 KRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ + + + + + S SSD TI+LW+ G + +GH+ +R + F D K +VS
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVS 1019
Query: 453 GAYDGKIKVWNLVAA 467
G+ D IK+W+L +
Sbjct: 1020 GSDDNTIKLWDLATS 1034
Score = 334 (122.6 bits), Expect = 2.6e-30, Sum P(3) = 2.6e-30
Identities = 81/233 (34%), Positives = 131/233 (56%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +VSG DNTIK+WD + + + L H+ SV + + D++ + S S DST+++WD
Sbjct: 1013 DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Query: 301 VNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
TGE+ TL H + V + FS +G ++ + S D +I +W+ ++ L++ L G
Sbjct: 1073 SATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE---LQQTLTGRSD 1129
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGS 414
V+ V F D K + S D TIK+W++++ E ++TL GH I + + +L+ SGS
Sbjct: 1130 WVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGS 1189
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
D T +LWD G L++ EGH + V + F D K + S +Y IK+W+ V
Sbjct: 1190 YDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPV 1242
Score = 326 (119.8 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 99/368 (26%), Positives = 174/368 (47%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D K + S S T+K+WN ++ E ++TL GH + + + + + + S SSD TI+ +
Sbjct: 929 DGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN 988
Query: 173 ----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E Q HD +W + +P + W + LQ+
Sbjct: 989 STTGELQQTFKGHD----LW-IRAVAFSPDGKHLVSGSDDNTIKL---WDLATSELQQ-- 1038
Query: 229 CRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE 284
++S+ V+ + + DD ++ S D+TIK+WD + + + L GH+ V + + D
Sbjct: 1039 SLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDG 1098
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMV 342
+++ S S D T+++W+ TGE+ TL + V + FS +G + D +I +WD
Sbjct: 1099 KLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSA 1158
Query: 343 SPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
+ L + L GH + V F D K + S S D+T K+W+ ++ E ++ GH + +
Sbjct: 1159 TGE---LLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWV 1215
Query: 401 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS-GAY 455
+ + +L+ S S TI+LWD G L+ L +E + F D R+ S +
Sbjct: 1216 ESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIF 1275
Query: 456 DGKIKVWN 463
D KI W+
Sbjct: 1276 DTKI--WD 1281
Score = 299 (110.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 99/343 (28%), Positives = 164/343 (47%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D K + S+S D TIK+WN+++ E +T GH I + + + +VSGS DNTI+ D
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Query: 173 ----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E Q H ++ F +P + W LQR
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAF-----SPDDKQLASSSLDSTIKL---WDSATGELQRT- 1081
Query: 229 CRSENSKGVYCLQYD-DHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE 284
+S+GV + + D K++ S D TIK+W+ ++ + + LTG + V + + D
Sbjct: 1082 -LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDG 1140
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMV 342
+ + SG DST+++WD TGE++ TL H + + + FS +G ++ + S D++ +WD
Sbjct: 1141 KQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWD-- 1198
Query: 343 SPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
P L ++ GH V V F D K + S+S TIK+W+ + E ++TLN
Sbjct: 1199 -PATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESA 1257
Query: 401 ACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
+ + +RL D ++WD G L+ L+GH + V
Sbjct: 1258 GSVAFSPDGNRLASVDIFDT--KIWDPATGELLQALKGHSKWV 1298
Score = 280 (103.6 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 68/206 (33%), Positives = 113/206 (54%)
Query: 268 KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-N 324
+ L H G V + + D + ++SGS D TV++WD TGE++ TL H V L FS +
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 325 G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV 381
G ++ + S D +I +WD + L + GH ++ V F D K + SAS D TIK+
Sbjct: 804 GKLLASGSYDNTIDLWDSATGE---LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKI 860
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ ++ E +TL+ H + + + + +L+ S S D+TI++W+ G + LEG
Sbjct: 861 WDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 440 VRCIRF--DAKRIVSGAYDGKIKVWN 463
V+ + F D K++ SG+ +K+WN
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWN 946
Score = 63 (27.2 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 162 GSSDNTIRYRDEFQIVSSSHDDTILIWD 189
G ++ + D Q+VS S+DDT+ IWD
Sbjct: 751 GPVESVVFSPDGKQLVSGSYDDTVKIWD 778
Score = 40 (19.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 55 PQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQR 105
P F S MC ++ S D D ++ +L+ Y TYL P+L +
Sbjct: 416 PLFISAATMC-RFIS--STYDPQDRLQKVLNDKTSYVSEMARTYL-PVLNQ 462
Score = 37 (18.1 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 258 VWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+ ++S QC++V+ +C+ D+
Sbjct: 566 IHQKLSDQCLRVMESKLKKNICMLSDD 592
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 339 (124.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 76/238 (31%), Positives = 131/238 (55%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSS 292
+ CL ++ + +G D T K+WD S + + LTGH+ ++ L ++ II+GS
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSF 239
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLR 350
D TV VW+ +TG V TLI HC + F+ +++T S D++ +WD V+ +
Sbjct: 240 DHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA-- 297
Query: 351 RVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR 408
L GH + + D+ K I +AS D T ++++ ++ E V L GH+ I+ + + +
Sbjct: 298 -TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ 356
Query: 409 --LVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRC-IRFDAKRIVSGAYDGKIKVW 462
+++GSSD T R+WD + G CL+VLEGH +E+ C + I++G+ D ++W
Sbjct: 357 GNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 331 (121.6 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 72/232 (31%), Positives = 129/232 (55%)
Query: 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVW 299
Y D KI +G D T K+W + +C GHT ++CL ++ + ++ +GS D+T ++W
Sbjct: 146 YGD-KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
Query: 300 DVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D+ +GE V TL H ++ L F S ++T S D ++ VW+ + ++ L+GH
Sbjct: 205 DIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY---TLIGHC 261
Query: 358 AAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSG 413
A ++ V ++D I++ S D+T K+W+ + + V TL GH I +C Y +L+ +
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVWN 463
S+D T R++ C+ LEGHE + I F+ + R+++G+ D ++W+
Sbjct: 322 SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 276 (102.2 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 68/227 (29%), Positives = 113/227 (49%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTG 304
++G D T K+WD S + + L GH V + ++ I +GS D T ++W V TG
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ +T H ++ L F+ + ++ T S D + +WD+ S E+ L GH A +
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVF---TLTGHSAEIIS 224
Query: 363 VDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNT 418
+ F+ I++ S D T+ VW + V TL GH I A + L+++GS D T
Sbjct: 225 LSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKT 284
Query: 419 IRLWDIECGACLRVLEGHEE--LVRCIRFDAKRIVSGAYDGKIKVWN 463
+LWD G C+ L GH++ L C + K I + + DG ++++
Sbjct: 285 CKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Score = 241 (89.9 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 76/278 (27%), Positives = 123/278 (44%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRD---- 172
I + S D+T K+W+ + + T GH I CL + + LV +GS D T + D
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM--GKFLLQRINCR 230
E + H I+ F N S I W G+ + I
Sbjct: 210 EEVFTLTGHSAEIISLSF-NTSGNRIITGSFDHTVTV-------WEADTGRKVYTLIGHC 261
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQYDERVII 288
+E S V+ +D I++G D T K+WD V+ +C+ LTGH +L C Y ++I
Sbjct: 262 AEISSAVF--NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIA 319
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNE 346
+ S+D T R++ T E V L H + + F+ ++T S D++ +WD +
Sbjct: 320 TASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQC 379
Query: 347 ITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
+ +VL GH + F+ K I++ S D T ++W
Sbjct: 380 L---QVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 217 (81.4 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 61/209 (29%), Positives = 103/209 (49%)
Query: 268 KVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN- 324
KVL H + + L I+GS D T ++WD +GE ++TL H V + F+N
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 325 --GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIK 380
+ T S D++ +W + + R GH A + + F+ + + A+G D T K
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFR---GHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGH-E 437
+W+ S E V TL GH I L + +++GS D+T+ +W+ + G + L GH
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCA 262
Query: 438 ELVRCI-RFDAKRIVSGAYDGKIKVWNLV 465
E+ + +D I++G+ D K+W+ V
Sbjct: 263 EISSAVFNWDCSLILTGSMDKTCKLWDAV 291
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 58/202 (28%), Positives = 92/202 (45%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGS 163
+ ISL N I++ S D T+ VW + V TL GH I A + L+++GS
Sbjct: 221 EIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGS 280
Query: 164 SDNTIRYRDEF--QIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM 219
D T + D + V++ HDD IL F +Y+ I
Sbjct: 281 MDKTCKLWDAVNGKCVATLTGHDDEILDSCF-DYTGKLIATASADGTARIFSAATR---- 335
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL- 278
+ + + E SK + Q +++++G D T ++WD + QC++VL GHT +
Sbjct: 336 -ECVTKLEGHEGEISKISFNPQ--GNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS 392
Query: 279 C-LQYDERVIISGSSDSTVRVW 299
C Y +II+GS D+T R+W
Sbjct: 393 CAFNYKGDIIITGSKDNTCRIW 414
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 343 SPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
S ++ L +VL H + V ++ ++ S DRT K+W+T+S E + TL GH+ +
Sbjct: 78 SNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVV 137
Query: 401 ACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGA 454
+ Y D+ + +GS D T +LW +E G C GH + C+ F+ + + +G+
Sbjct: 138 YAIAFNNPYGDK-IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGS 196
Query: 455 YDGKIKVWNL 464
D K+W++
Sbjct: 197 MDTTAKLWDI 206
Score = 99 (39.9 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 72 SEQDQIDF-VENLLSRMCHYQHGHINTYLKPMLQRDFISLLP---NFDEKYIVSASGDRT 127
S DQ+ ++ L +++ QH + YL +L+ + L N ++ S DRT
Sbjct: 58 SRSDQVKLLIQRLQNKLG--QHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRT 115
Query: 128 IKVWNTSSCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIR 169
K+W+T+S E + TL GH+ + + Y D+ + +GS D T +
Sbjct: 116 CKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK-IATGSFDKTCK 160
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 369 (135.0 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 93/316 (29%), Positives = 151/316 (47%)
Query: 125 DRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR--DEFQIVSSSH 181
D+ K WN + L GH+ I C+Q D ++V+GS DNT++ D+ +++ +
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 182 DDTILIWDF-LNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCL 240
T +W ++ I ++ + LL + + V C+
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS------LLHTLQGHTST---VRCM 344
Query: 241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWD 300
+V+G RD T++VWD S + + L GH +V C+Q+D ++SG D TV++W+
Sbjct: 345 AMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRA 358
+TG + TL H V L F + + CS D SI VWD P +L GH +
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS 464
Query: 359 AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDN 417
+ + +VS + D ++VW+ V L+GH+ I LQ+ R +V + S D
Sbjct: 465 LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDG 524
Query: 418 TIRLWDIECGACLRVL 433
T++LWDIE GA +R L
Sbjct: 525 TVKLWDIERGALIRDL 540
Score = 337 (123.7 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 72/216 (33%), Positives = 119/216 (55%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVL-CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
D K W+ + VL GH V+ C+Q + V+++GS D+T++VW ++ GE++ TL+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 312 HHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY 369
H V + S G +V+ S DR++ VW V + L L GH + V +
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS---LLHTLQGHTSTVRCMAMAGSI 350
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 429
+V+ S D T++VW+ S + TL+GH + C+Q+ VVSG D T+++W+ G C
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC 410
Query: 430 LRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
+R L GH V + F+++R + SG+ D I+VW+
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 330 (121.2 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 75/224 (33%), Positives = 124/224 (55%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM 306
IVSG D T+KVW V + L GHT +V C+ ++++GS D+T+RVWDV +G
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRH 370
Query: 307 VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD 366
+ TL H AV ++F +V+ D ++ +W+ + I R L GH V + F+
Sbjct: 371 LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCI---RTLTGHNNRVYSLLFE 427
Query: 367 -EKYIV-SASGDRTIKVWNTS---SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 421
E+ IV S S D +I+VW+ + E V L GH + +Q R ++VS ++D+ +R+
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRV 487
Query: 422 WDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAYDGKIKVWNL 464
WDI G C+ +L GH + ++ F + + + DG +K+W++
Sbjct: 488 WDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDI 531
Score = 299 (110.3 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 61/176 (34%), Positives = 95/176 (53%)
Query: 292 SDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL 349
+D + W+ N M + ++ H + ++ + ++VT S D ++ VW + E+
Sbjct: 233 ADKIEKNWNANP-IMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKGEVMY 290
Query: 350 RRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
LVGH V + +YIVS S DRT+KVW+T + TL GH + C+
Sbjct: 291 --TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG 348
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
++V+GS D T+R+WD+E G L L GH VRC++FD +VSG YD +K+WN
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Score = 188 (71.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 345 NEITLRRVLVGHRA-AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
N I VL GH + + + +V+ S D T+KVW E + TL GH G+
Sbjct: 243 NPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTS 302
Query: 404 QYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKV 461
Q R +VSGS+D T+++W G+ L L+GH VRC+ +V+G+ D ++V
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRV 362
Query: 462 WNL 464
W++
Sbjct: 363 WDV 365
Score = 178 (67.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 48/196 (24%), Positives = 92/196 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF--QI 176
+V+ S D T++VW+ S + TL+GH + C+Q+ VVSG D T++ + +
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC 410
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + ++ L SE I G+ + + + + G
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP--EGQECVALLQGHTSLTSG 468
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS-T 295
+Q + +VS D+ ++VWD C+ +L+GH ++ LQ+ R +++ SSD T
Sbjct: 469 ---MQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGT 525
Query: 296 VRVWDVNTGEMVNTLI 311
V++WD+ G ++ L+
Sbjct: 526 VKLWDIERGALIRDLV 541
Score = 143 (55.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 376 DRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
D+ K WN + L GH+ I C+Q D ++V+GS DNT+++W I+ G + L
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 435 GH------EELVRCIRFDAKRIVSGAYDGKIKVWNLV 465
GH ++ +C R+ IVSG+ D +KVW+ V
Sbjct: 294 GHTGGVWTSQISQCGRY----IVSGSTDRTVKVWSTV 326
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+YIVS S DRT+KVW+T + TL GH + C+ ++V+GS D T+R D
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 364
Score = 94 (38.1 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGS 163
D + + +V+ S D T+KVW E + TL GH G+ Q R +VSGS
Sbjct: 256 DHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGS 315
Query: 164 SDNTIR 169
+D T++
Sbjct: 316 TDRTVK 321
Score = 72 (30.4 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 27/110 (24%), Positives = 44/110 (40%)
Query: 26 YLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLS 85
Y +SS+ P + + P+R + P+ E F S +Q+D LL
Sbjct: 46 YNADKLSSSRPLQHKLDLSASPSRNNDLNPRV----EHLIALFKDLSSAEQMDAFTRLLQ 101
Query: 86 RMCHYQHGHINTYLKPMLQRDFISLLP-NFDEKYIVSASGDRTIKVWNTS 134
+ ++P QRDF+S LP K + + +G +KV S
Sbjct: 102 ESNMTNIRQLRAIIEPHFQRDFLSCLPVELGMKILHNLTGYDLLKVAQVS 151
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 369 (135.0 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 93/316 (29%), Positives = 151/316 (47%)
Query: 125 DRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYR--DEFQIVSSSH 181
D+ K WN + L GH+ I C+Q D ++V+GS DNT++ D+ +++ +
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 182 DDTILIWDF-LNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCL 240
T +W ++ I ++ + LL + + V C+
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS------LLHTLQGHTST---VRCM 344
Query: 241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWD 300
+V+G RD T++VWD S + + L GH +V C+Q+D ++SG D TV++W+
Sbjct: 345 AMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRA 358
+TG + TL H V L F + + CS D SI VWD P +L GH +
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS 464
Query: 359 AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDN 417
+ + +VS + D ++VW+ V L+GH+ I LQ+ R +V + S D
Sbjct: 465 LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDG 524
Query: 418 TIRLWDIECGACLRVL 433
T++LWDIE GA +R L
Sbjct: 525 TVKLWDIERGALIRDL 540
Score = 337 (123.7 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 72/216 (33%), Positives = 119/216 (55%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVL-CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
D K W+ + VL GH V+ C+Q + V+++GS D+T++VW ++ GE++ TL+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 312 HHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY 369
H V + S G +V+ S DR++ VW V + L L GH + V +
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS---LLHTLQGHTSTVRCMAMAGSI 350
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 429
+V+ S D T++VW+ S + TL+GH + C+Q+ VVSG D T+++W+ G C
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC 410
Query: 430 LRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
+R L GH V + F+++R + SG+ D I+VW+
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 330 (121.2 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 75/224 (33%), Positives = 124/224 (55%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM 306
IVSG D T+KVW V + L GHT +V C+ ++++GS D+T+RVWDV +G
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRH 370
Query: 307 VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD 366
+ TL H AV ++F +V+ D ++ +W+ + I R L GH V + F+
Sbjct: 371 LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCI---RTLTGHNNRVYSLLFE 427
Query: 367 -EKYIV-SASGDRTIKVWNTS---SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 421
E+ IV S S D +I+VW+ + E V L GH + +Q R ++VS ++D+ +R+
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRV 487
Query: 422 WDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAYDGKIKVWNL 464
WDI G C+ +L GH + ++ F + + + DG +K+W++
Sbjct: 488 WDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDI 531
Score = 299 (110.3 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 61/176 (34%), Positives = 95/176 (53%)
Query: 292 SDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL 349
+D + W+ N M + ++ H + ++ + ++VT S D ++ VW + E+
Sbjct: 233 ADKIEKNWNANP-IMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKGEVMY 290
Query: 350 RRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
LVGH V + +YIVS S DRT+KVW+T + TL GH + C+
Sbjct: 291 --TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG 348
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
++V+GS D T+R+WD+E G L L GH VRC++FD +VSG YD +K+WN
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Score = 188 (71.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 345 NEITLRRVLVGHRA-AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
N I VL GH + + + +V+ S D T+KVW E + TL GH G+
Sbjct: 243 NPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTS 302
Query: 404 QYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKV 461
Q R +VSGS+D T+++W G+ L L+GH VRC+ +V+G+ D ++V
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRV 362
Query: 462 WNL 464
W++
Sbjct: 363 WDV 365
Score = 178 (67.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 48/196 (24%), Positives = 92/196 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF--QI 176
+V+ S D T++VW+ S + TL+GH + C+Q+ VVSG D T++ + +
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC 410
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
+ + ++ L SE I G+ + + + + G
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP--EGQECVALLQGHTSLTSG 468
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS-T 295
+Q + +VS D+ ++VWD C+ +L+GH ++ LQ+ R +++ SSD T
Sbjct: 469 ---MQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGT 525
Query: 296 VRVWDVNTGEMVNTLI 311
V++WD+ G ++ L+
Sbjct: 526 VKLWDIERGALIRDLV 541
Score = 143 (55.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 376 DRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
D+ K WN + L GH+ I C+Q D ++V+GS DNT+++W I+ G + L
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 435 GH------EELVRCIRFDAKRIVSGAYDGKIKVWNLV 465
GH ++ +C R+ IVSG+ D +KVW+ V
Sbjct: 294 GHTGGVWTSQISQCGRY----IVSGSTDRTVKVWSTV 326
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+YIVS S DRT+KVW+T + TL GH + C+ ++V+GS D T+R D
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 364
Score = 94 (38.1 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGS 163
D + + +V+ S D T+KVW E + TL GH G+ Q R +VSGS
Sbjct: 256 DHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGS 315
Query: 164 SDNTIR 169
+D T++
Sbjct: 316 TDRTVK 321
Score = 72 (30.4 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 27/110 (24%), Positives = 44/110 (40%)
Query: 26 YLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLS 85
Y +SS+ P + + P+R + P+ E F S +Q+D LL
Sbjct: 46 YNADKLSSSRPLQHKLDLSASPSRNNDLNPRV----EHLIALFKDLSSAEQMDAFTRLLQ 101
Query: 86 RMCHYQHGHINTYLKPMLQRDFISLLP-NFDEKYIVSASGDRTIKVWNTS 134
+ ++P QRDF+S LP K + + +G +KV S
Sbjct: 102 ESNMTNIRQLRAIIEPHFQRDFLSCLPVELGMKILHNLTGYDLLKVAQVS 151
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 317 (116.6 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 77/216 (35%), Positives = 119/216 (55%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
+E NWR G ++ S+ GV CLQ++ +++G D TIK+W S +C+K LTG
Sbjct: 365 LEKNWRKGTHTIKTFTGHSD---GVTCLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTG 421
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
HT V L +D + +ISG DST++VW+ +TG+ + T H +AV+ + F+N +V+ S
Sbjct: 422 HTKGVRALVFDNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSA 481
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFV 390
D ++ VW + S TLR GH VN V I SAS D TI++W+ +S E +
Sbjct: 482 DHTVRVWHVDSRTCYTLR----GHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECI 537
Query: 391 RTL-----NGHKRGIACL---QYRDRLVVSGS-SDN 417
+ NGH + C+ Y++ L+ S SD+
Sbjct: 538 KVFGGMENNGHIGQVQCIIPFTYKEELIEDESESDS 573
Score = 284 (105.0 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 92/370 (24%), Positives = 160/370 (43%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 165
D ++ L F+ KY+++ S D TIK+W S E V+TL GH +G+ L + ++ ++SG D
Sbjct: 384 DGVTCL-QFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLISGGLD 442
Query: 166 NTIRYRDEF--QIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
+TI+ + Q +++ H+D ++ DF N S W +
Sbjct: 443 STIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS----------IVSGSADHTVRVWHVDS 492
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL-----TGHTGS 276
+ ++ V + + I S D TI++WD S +CIKV GH G
Sbjct: 493 RTCYTLRGHTDWVNHVK-IHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQ 551
Query: 277 VLCL---QYDERVIISGS-SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
V C+ Y E +I S SDS + N T A + M T
Sbjct: 552 VQCIIPFTYKEELIEDESESDS-----ENNQNSTTTTTTTSAAATAT---ATAMGATLGT 603
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
+ D + N T + + ++++ D TIK+W+ ++ + +RT
Sbjct: 604 NNISLPNDTATINRSTFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATGKCIRT 663
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
GH G+ + ++SG+ D I++WD++ G CL + V C+ R V+
Sbjct: 664 QFGHIEGVWSIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSS-VSCVGLSDSRFVA 722
Query: 453 GAYDGKIKVW 462
G +G++K++
Sbjct: 723 GLENGEVKMY 732
Score = 243 (90.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 42/114 (36%), Positives = 69/114 (60%)
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV 410
+ GH V + F+ KY+++ S D TIK+W S E V+TL GH +G+ L + ++ +
Sbjct: 377 KTFTGHSDGVTCLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKL 436
Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+SG D+TI++W+ G C+ GHE+ V + F K IVSG+ D ++VW++
Sbjct: 437 ISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHV 490
Score = 198 (74.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
K W + ++T GH G+ CLQ+ + +++GS D TI++W I+ G C++ L GH +
Sbjct: 367 KNWRKGT-HTIKTFTGHSDGVTCLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKG 425
Query: 440 VRCIRFDAKRIVSGAYDGKIKVWN 463
VR + FD ++++SG D IKVWN
Sbjct: 426 VRALVFDNQKLISGGLDSTIKVWN 449
Score = 137 (53.3 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
++ + DNTI+LWD+ G C+R GH E V I D RI+SGA+D IKVW+L
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTFRIISGAHDRLIKVWDL 695
Score = 81 (33.6 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 129 KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
K W + ++T GH G+ CLQ+ + +++GS D TI+
Sbjct: 367 KNWRKGT-HTIKTFTGHSDGVTCLQFNRKYLMTGSYDTTIK 406
Score = 55 (24.4 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 80 VENLLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
++ LLS+ C Q I+ + +++ DFIS LP
Sbjct: 189 LQGLLSQCCFPQLSFISQEVSSLIKIDFISTLP 221
>ASPGD|ASPL0000034848 [details] [associations]
symbol:AN2861 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 SUPFAM:SSF81383 EMBL:AACD01000051 KO:K03362
RefSeq:XP_660465.1 ProteinModelPortal:Q5B9B9
EnsemblFungi:CADANIAT00010229 GeneID:2874563 KEGG:ani:AN2861.2
HOGENOM:HOG000198049 OMA:YHSASIL OrthoDB:EOG4X6GHM Uniprot:Q5B9B9
Length = 656
Score = 362 (132.5 bits), Expect = 7.5e-38, Sum P(2) = 7.5e-38
Identities = 78/199 (39%), Positives = 118/199 (59%)
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDV-NTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
H+ S+LCLQ+D+ ++++GSSD T +WD+ N + + L H VL + F + +V+CS
Sbjct: 410 HSASILCLQFDDEIMVTGSSDHTCIIWDIKNDYKPIRRLEGHTAGVLDVCFDHRYIVSCS 469
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
KD +I VWD S L + L GHR VN V IVSASGD K+WN +S V+
Sbjct: 470 KDNTICVWDRRSG---ALVKKLYGHRGPVNAVQLRGDLIVSASGDGVAKLWNITSGLCVK 526
Query: 392 TLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-- 447
+ RG+AC+++ + R V++G +D I +D G ++ +EGH LVR + D
Sbjct: 527 EFSSRDRGLACVEFSNDARTVLTGGNDRAIYQFDANTGQLVKEIEGHTGLVRSLHLDDVN 586
Query: 448 KRIVSGAYDGKIKVWNLVA 466
+RIVSG+YD +KV++ A
Sbjct: 587 QRIVSGSYDTSVKVFDAQA 605
Score = 349 (127.9 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 88/257 (34%), Positives = 137/257 (53%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD-RVSLQCIKVLT 271
+E+ W+ GK + +++ VYC Q+D+ KI++G RD TI+VWD R C K++
Sbjct: 305 LESRWKEGKAAAIYLQGHTDS---VYCAQFDEDKIITGSRDRTIRVWDARYPWACRKIIG 361
Query: 272 GHTGSVLCLQ--YDERVIISGSSDS-TVRVWDVNTGEMVNT----LIHHCEAVLHLRFSN 324
G VL +D GSS T+R + E+V+ +H ++L L+F +
Sbjct: 362 PAPGGVLNNGPFHDPEQQALGSSPLLTIRPPPASPAEIVSLHEKPSNYHSASILCLQFDD 421
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNT 384
+MVT S D + +WD+ + + +RR L GH A V V FD +YIVS S D TI VW+
Sbjct: 422 EIMVTGSSDHTCIIWDIKNDYK-PIRR-LEGHTAGVLDVCFDHRYIVSCSKDNTICVWDR 479
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 444
S V+ L GH+ + +Q R L+VS S D +LW+I G C++ + + C+
Sbjct: 480 RSGALVKKLYGHRGPVNAVQLRGDLIVSASGDGVAKLWNITSGLCVKEFSSRDRGLACVE 539
Query: 445 F--DAKRIVSGAYDGKI 459
F DA+ +++G D I
Sbjct: 540 FSNDARTVLTGGNDRAI 556
Score = 259 (96.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 68/205 (33%), Positives = 102/205 (49%)
Query: 270 LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA-VLHLR-FSNGMM 327
L GHT SV C Q+DE II+GS D T+RVWD +I VL+ F +
Sbjct: 319 LQGHTDSVYCAQFDEDKIITGSRDRTIRVWDARYPWACRKIIGPAPGGVLNNGPFHDPEQ 378
Query: 328 VTCSKDRSIAVWDM-VSPNEI-TLRRVLVG-HRAAVNVVDFDEKYIVSASGDRTIKVWNT 384
+ + SP EI +L H A++ + FD++ +V+ S D T +W+
Sbjct: 379 QALGSSPLLTIRPPPASPAEIVSLHEKPSNYHSASILCLQFDDEIMVTGSSDHTCIIWDI 438
Query: 385 SS-CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+ + +R L GH G+ + + R +VS S DNTI +WD GA ++ L GH V +
Sbjct: 439 KNDYKPIRRLEGHTAGVLDVCFDHRYIVSCSKDNTICVWDRRSGALVKKLYGHRGPVNAV 498
Query: 444 RFDAKRIVSGAYDGKIKVWNLVAAL 468
+ IVS + DG K+WN+ + L
Sbjct: 499 QLRGDLIVSASGDGVAKLWNITSGL 523
Score = 188 (71.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 62/209 (29%), Positives = 98/209 (46%)
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS 292
++ GV + +D IVS +DNTI VWDR S +K L GH G V +Q +I+S S
Sbjct: 451 HTAGVLDVCFDHRYIVSCSKDNTICVWDRRSGALVKKLYGHRGPVNAVQLRGDLIVSASG 510
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDMVSPNEITLR 350
D ++W++ +G V + + FSN ++T DR+I +D N L
Sbjct: 511 DGVAKLWNITSGLCVKEFSSRDRGLACVEFSNDARTVLTGGNDRAIYQFDA---NTGQLV 567
Query: 351 RVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD- 407
+ + GH V + D+ + IVS S D ++KV++ + E G D
Sbjct: 568 KEIEGHTGLVRSLHLDDVNQRIVSGSYDTSVKVFDAQAGELSIDFPGWTTSWMLSVKSDY 627
Query: 408 RLVVSGSSDNTIRLWDIECGAC-LRVLEG 435
R +V+ S D+ + D G + +LEG
Sbjct: 628 RRIVATSQDSRAVIMDFGYGLDGIDLLEG 656
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/219 (25%), Positives = 98/219 (44%)
Query: 95 INTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQ 153
++ + KP L FD++ +V+ S D T +W+ + + +R L GH G+ +
Sbjct: 400 VSLHEKPSNYHSASILCLQFDDEIMVTGSSDHTCIIWDIKNDYKPIRRLEGHTAGVLDVC 459
Query: 154 YRDRLVVSGSSDNTIRYRDEFQ--IVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXX 211
+ R +VS S DNTI D +V + + +Q
Sbjct: 460 FDHRYIVSCSKDNTICVWDRRSGALVKKLYGHRGPV--------NAVQLRGDLIVSASGD 511
Query: 212 XIENNWRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKV 269
+ W + L + S +G+ C+++ D +++G D I +D + Q +K
Sbjct: 512 GVAKLWNITSGLC--VKEFSSRDRGLACVEFSNDARTVLTGGNDRAIYQFDANTGQLVKE 569
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEM 306
+ GHTG V L D+ + I+SGS D++V+V+D GE+
Sbjct: 570 IEGHTGLVRSLHLDDVNQRIVSGSYDTSVKVFDAQAGEL 608
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 62/202 (30%), Positives = 91/202 (45%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
FD +YIVS S D TI VW+ S V+ L GH+ + +Q R L+VS S D +
Sbjct: 460 FDHRYIVSCSKDNTICVWDRRSGALVKKLYGHRGPVNAVQLRGDLIVSASGDGVAKL--- 516
Query: 174 FQIVS-------SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR 226
+ I S SS D + +F N + T + + N G+ L++
Sbjct: 517 WNITSGLCVKEFSSRDRGLACVEFSNDARTVL----TGGNDRAIYQFDAN--TGQ-LVKE 569
Query: 227 INCRSENSKG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQY 282
I E G V L DD +IVSG D ++KV+D + + G T S +L ++
Sbjct: 570 I----EGHTGLVRSLHLDDVNQRIVSGSYDTSVKVFDAQAGELSIDFPGWTTSWMLSVKS 625
Query: 283 DERVIISGSSDSTVRVWDVNTG 304
D R I++ S DS + D G
Sbjct: 626 DYRRIVATSQDSRAVIMDFGYG 647
Score = 73 (30.8 bits), Expect = 7.5e-38, Sum P(2) = 7.5e-38
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFV----RTLNGHKRGIACLQYRDRLVVSGSSDNT 167
E+ + +S TI+ S E V + N H I CLQ+ D ++V+GSSD+T
Sbjct: 377 EQQALGSSPLLTIRPPPASPAEIVSLHEKPSNYHSASILCLQFDDEIMVTGSSDHT 432
Score = 71 (30.1 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 71 WSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKV 130
WSEQ V + R + + H + +P + ++ Y++ RT++
Sbjct: 252 WSEQVSSQHVWRNVFRSYYGKRCHPGSGKQPAAGLGKNTFQQDWKRLYLIR----RTLES 307
Query: 131 -WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
W + L GH + C Q+ + +++GS D TIR D
Sbjct: 308 RWKEGKAAAIY-LQGHTDSVYCAQFDEDKIITGSRDRTIRVWD 349
Score = 55 (24.4 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 140 RTLNGH-KRGIACLQYRDRLVVSGSSDNTIRYR-DEFQIVSSSHDDTILIWD 189
RTL K G A Y + G +D+ + DE +I++ S D TI +WD
Sbjct: 303 RTLESRWKEGKAAAIY-----LQGHTDSVYCAQFDEDKIITGSRDRTIRVWD 349
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 332 (121.9 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 75/231 (32%), Positives = 126/231 (54%)
Query: 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVW 299
Y D K+ +G D T K+W + +C GHT ++CL ++ + ++ +GS D+T ++W
Sbjct: 146 YGD-KVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN-G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
DV +GE V+TL H ++ L F+ G +VT S D + +WD+ S ++ VL GHR
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKV---HVLSGHR 261
Query: 358 AAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSG 413
++ V F D I +AS D++ KVW+ + + TL GH + C Y +L+ +
Sbjct: 262 GEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATA 321
Query: 414 SSDNTIRLWDIECGACLRVLEGHE-ELVR-CIRFDAKRIVSGAYDGKIKVW 462
S+D T R++ + CL LEGH+ E+ + C R+++ + D +VW
Sbjct: 322 SADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 296 (109.3 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 73/239 (30%), Positives = 124/239 (51%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSS 292
+ CL ++ + +G D T K+WD S + + L GH + LC +++GS
Sbjct: 180 IVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSF 239
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLR 350
D T +WDV +G V+ L H + ++F+ ++ T S D+S VWD +
Sbjct: 240 DHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLA-- 297
Query: 351 RVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYR 406
L+GH V V F+ + I +AS D T +V++T + + + L GHK I+ C +
Sbjct: 298 -TLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQ 356
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRC-IRFDAKRIVSGAYDGKIKVWN 463
V++ S D T R+W ++ GACL+VLEGH +E+ C ++ I++G+ D ++W+
Sbjct: 357 GSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 271 (100.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 66/227 (29%), Positives = 115/227 (50%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTG 304
++G D T K+WD S + + L GH V + ++ + +GS D T ++W TG
Sbjct: 108 ITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETG 167
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ T H ++ L F+ + ++ T S D + +WD+ S E++ L GH A +
Sbjct: 168 KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVS---TLAGHFAEIIS 224
Query: 363 VDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDNT 418
+ F+ +V+ S D T +W+ S V L+GH+ I+C+Q+ D L+ + S D +
Sbjct: 225 LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKS 284
Query: 419 IRLWDIECGACLRVLEGHEELVR--CIRFDAKRIVSGAYDGKIKVWN 463
++WD E G CL L GH + V C + + I + + DG +V++
Sbjct: 285 CKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS 331
Score = 215 (80.7 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 48/149 (32%), Positives = 76/149 (51%)
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTI 379
S +T S DR+ +WD S E+ L GHR V + F+ Y + + S D+T
Sbjct: 103 SGSCFITGSYDRTCKIWDTASGEEL---HTLEGHRNVVYAIAFNNPYGDKVATGSFDKTC 159
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGH- 436
K+W+ + + T GH I CL + + LV +GS D T +LWD+E G + L GH
Sbjct: 160 KLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHF 219
Query: 437 EELVR-CIRFDAKRIVSGAYDGKIKVWNL 464
E++ C R+V+G++D +W++
Sbjct: 220 AEIISLCFNTTGDRLVTGSFDHTAILWDV 248
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 68/275 (24%), Positives = 118/275 (42%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDEFQI 176
+ + S D+T K+W+ + + T GH I CL + + LV +GS D T + D
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD---- 205
Query: 177 VSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKG 236
V S + + L F W + ++++ S +
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG--RKVHVLSGHRGE 263
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSS 292
+ C+Q+ D I + D + KVWD QC+ L GH VL C Y ++I + S+
Sbjct: 264 ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASA 323
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLR 350
D T RV+ +T + + L H + + F+ G V T S D++ VW + +
Sbjct: 324 DGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG---ACL 380
Query: 351 RVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWN 383
+VL GH + +++ I++ S D T ++W+
Sbjct: 381 QVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 39/124 (31%), Positives = 64/124 (51%)
Query: 349 LRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-- 404
L R L H + V F++ ++ S DRT K+W+T+S E + TL GH+ + +
Sbjct: 84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 405 --YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIK 460
Y D+ V +GS D T +LW E G C GH + C+ F+ + + +G+ D K
Sbjct: 144 NPYGDK-VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAK 202
Query: 461 VWNL 464
+W++
Sbjct: 203 LWDV 206
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/202 (27%), Positives = 93/202 (46%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGS 163
+ ISL N +V+ S D T +W+ S V L+GH+ I+C+Q+ D L+ + S
Sbjct: 221 EIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATAS 280
Query: 164 SDNTIRYRDEF--QIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM 219
D + + D Q +++ H+D +L F NY+ I + ++
Sbjct: 281 LDKSCKVWDAEGGQCLATLLGHNDEVLDVCF-NYTGQLIATASADGTSRVFST--DTFQC 337
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL- 278
L Q + E SK C ++++ D T +VW + C++VL GH+ +
Sbjct: 338 ---LCQLEGHKGEISK--VCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFS 392
Query: 279 C-LQYDERVIISGSSDSTVRVW 299
C Y+ II+GS D+T R+W
Sbjct: 393 CAFNYEGDTIITGSKDNTCRIW 414
Score = 88 (36.0 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIR 169
++ S DRT K+W+T+S E + TL GH+ + + Y D+ V +GS D T +
Sbjct: 108 ITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK-VATGSFDKTCK 160
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 317 (116.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 189
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 190 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 249
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 250 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 34 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 93
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 94 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 150
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 151 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 210
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ CI F K IVSG+ D + +WNL
Sbjct: 211 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 70
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 131 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Score = 241 (89.9 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 5 VKPN-YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 63
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 124 DESVRIWDV 132
Score = 228 (85.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 79/309 (25%), Positives = 141/309 (45%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 71
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 72 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 124 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF 365
I V ++FS NG + + D ++ +WD S + + GH+ + +F
Sbjct: 184 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCL--KTYTGHKNEKYCIFANF 240
Query: 366 DE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDN 417
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D
Sbjct: 241 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 299
Query: 418 TIRLWDIEC 426
TI+LW +C
Sbjct: 300 TIKLWKSDC 308
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 171
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + W K +
Sbjct: 172 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKL---WDYSKGKCLKTY 226
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
+N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 227 TGHKNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 284
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 285 PTENIIASAALENDKTIKLW 304
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Score = 104 (41.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 25 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 82
Query: 166 NTIRYRD 172
T++ D
Sbjct: 83 KTLKIWD 89
Score = 102 (41.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 32 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 76
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 77 VSASDDKTLKIWD 89
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 317 (116.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 176
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ CI F K IVSG+ D + +WNL
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 241 (89.9 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 31 VKPN-YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 150 DESVRIWDV 158
Score = 228 (85.3 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 79/309 (25%), Positives = 141/309 (45%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 97
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 98 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF 365
I V ++FS NG + + D ++ +WD S + + GH+ + +F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCL--KTYTGHKNEKYCIFANF 266
Query: 366 DE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDN 417
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Query: 418 TIRLWDIEC 426
TI+LW +C
Sbjct: 326 TIKLWKSDC 334
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + W K +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKL---WDYSKGKCLKTY 252
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
+N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 253 TGHKNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Score = 104 (41.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 51 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 108
Query: 166 NTIRYRD 172
T++ D
Sbjct: 109 KTLKIWD 115
Score = 102 (41.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 102
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 103 VSASDDKTLKIWD 115
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 317 (116.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 176
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ CI F K IVSG+ D + +WNL
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 241 (89.9 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 31 VKPN-YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 150 DESVRIWDV 158
Score = 228 (85.3 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 79/309 (25%), Positives = 141/309 (45%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 97
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 98 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF 365
I V ++FS NG + + D ++ +WD S + + GH+ + +F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCL--KTYTGHKNEKYCIFANF 266
Query: 366 DE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDN 417
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Query: 418 TIRLWDIEC 426
TI+LW +C
Sbjct: 326 TIKLWKSDC 334
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + W K +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKL---WDYSKGKCLKTY 252
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
+N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 253 TGHKNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Score = 104 (41.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 51 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 108
Query: 166 NTIRYRD 172
T++ D
Sbjct: 109 KTLKIWD 115
Score = 102 (41.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 102
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 103 VSASDDKTLKIWD 115
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 317 (116.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 176
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ CI F K IVSG+ D + +WNL
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 241 (89.9 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 31 VKPN-YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 150 DESVRIWDV 158
Score = 228 (85.3 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 79/309 (25%), Positives = 141/309 (45%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 97
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 98 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF 365
I V ++FS NG + + D ++ +WD S + + GH+ + +F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCL--KTYTGHKNEKYCIFANF 266
Query: 366 DE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDN 417
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Query: 418 TIRLWDIEC 426
TI+LW +C
Sbjct: 326 TIKLWKSDC 334
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + W K +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKL---WDYSKGKCLKTY 252
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
+N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 253 TGHKNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Score = 104 (41.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 51 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 108
Query: 166 NTIRYRD 172
T++ D
Sbjct: 109 KTLKIWD 115
Score = 102 (41.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 102
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 103 VSASDDKTLKIWD 115
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 317 (116.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 176
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ CI F K IVSG+ D + +WNL
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 241 (89.9 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 31 VKPN-YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 150 DESVRIWDV 158
Score = 228 (85.3 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 79/309 (25%), Positives = 141/309 (45%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 97
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 98 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF 365
I V ++FS NG + + D ++ +WD S + + GH+ + +F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCL--KTYTGHKNEKYCIFANF 266
Query: 366 DE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDN 417
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Query: 418 TIRLWDIEC 426
TI+LW +C
Sbjct: 326 TIKLWKSDC 334
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + W K +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKL---WDYSKGKCLKTY 252
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
+N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 253 TGHKNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Score = 104 (41.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 51 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 108
Query: 166 NTIRYRD 172
T++ D
Sbjct: 109 KTLKIWD 115
Score = 102 (41.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 102
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 103 VSASDDKTLKIWD 115
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 317 (116.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 176
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ CI F K IVSG+ D + +WNL
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 241 (89.9 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 31 VKPN-YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 150 DESVRIWDV 158
Score = 228 (85.3 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 79/309 (25%), Positives = 141/309 (45%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 97
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 98 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF 365
I V ++FS NG + + D ++ +WD S + + GH+ + +F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCL--KTYTGHKNEKYCIFANF 266
Query: 366 DE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDN 417
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Query: 418 TIRLWDIEC 426
TI+LW +C
Sbjct: 326 TIKLWKSDC 334
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + W K +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKL---WDYSKGKCLKTY 252
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
+N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 253 TGHKNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Score = 104 (41.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 51 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 108
Query: 166 NTIRYRD 172
T++ D
Sbjct: 109 KTLKIWD 115
Score = 102 (41.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 102
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 103 VSASDDKTLKIWD 115
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 382 (139.5 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 92/266 (34%), Positives = 145/266 (54%)
Query: 213 IENNWRMGKF----LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCI- 267
+E NW G+F L + + + VY +Q+ +VSG RD T++VWD + +
Sbjct: 302 LEENWTKGRFTNFQLPHPAHMEEAHQECVYAIQFIGKWLVSGSRDKTVRVWDLNTKRLWH 361
Query: 268 KVLTGHTGSVLCLQYD----ERVIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRF 322
+ L GHT SVLCLQ++ E +IISGSSD V VW +TGE ++ + H ++VL+LRF
Sbjct: 362 RPLIGHTKSVLCLQFNPSPSEDIIISGSSDKNVIVWRFSTGEKIHEIAPAHDDSVLNLRF 421
Query: 323 SNGMMVTCSKDRSIAVWDM--VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIK 380
+ +VTCSKD+ I +W+ +SP + V G + D I S + I
Sbjct: 422 DHRYLVTCSKDKLIKIWNRKNLSPADKDYPSVHQGSGVSYPSYIVDTSVIPSPVLEAEIA 481
Query: 381 VWNTSSCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
+ + E + TL GH + +Q +VS S D I++W+I GAC + GHE
Sbjct: 482 KNHIRTLEPFSLLMTLVGHTAAVNAIQIHGDEIVSASGDRLIKIWNIRNGACKKTFVGHE 541
Query: 438 ELVRCIRFDAKRIVSGAYDGKIKVWN 463
+ + C++FD +R+VSG+ D I++++
Sbjct: 542 KGIACVQFDNQRVVSGSNDNTIRIFD 567
Score = 304 (112.1 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 75/222 (33%), Positives = 122/222 (54%)
Query: 233 NSKGVYCLQYD----DHKIVSGLRDNTIKVWDRVSLQCI-KVLTGHTGSVLCLQYDERVI 287
++K V CLQ++ + I+SG D + VW + + I ++ H SVL L++D R +
Sbjct: 367 HTKSVLCLQFNPSPSEDIIISGSSDKNVIVWRFSTGEKIHEIAPAHDDSVLNLRFDHRYL 426
Query: 288 ISGSSDSTVRVWD---VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK--DRSIAVWDMV 342
++ S D +++W+ ++ + +H V + + V S + IA +
Sbjct: 427 VTCSKDKLIKIWNRKNLSPADKDYPSVHQGSGVSYPSYIVDTSVIPSPVLEAEIAKNHIR 486
Query: 343 SPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
+ +L LVGH AAVN + IVSASGDR IK+WN + +T GH++GIAC
Sbjct: 487 TLEPFSLLMTLVGHTAAVNAIQIHGDEIVSASGDRLIKIWNIRNGACKKTFVGHEKGIAC 546
Query: 403 LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 444
+Q+ ++ VVSGS+DNTIR++D A + L GH +LVR ++
Sbjct: 547 VQFDNQRVVSGSNDNTIRIFDHASRAEVACLRGHADLVRTVQ 588
Score = 211 (79.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 63/207 (30%), Positives = 104/207 (50%)
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNT-LIHHCEAVLHLRF----SNGMM 327
H V +Q+ + ++SGS D TVRVWD+NT + + LI H ++VL L+F S ++
Sbjct: 326 HQECVYAIQFIGKWLVSGSRDKTVRVWDLNTKRLWHRPLIGHTKSVLCLQFNPSPSEDII 385
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC 387
++ S D+++ VW + +I + H +V + FD +Y+V+ S D+ IK+WN +
Sbjct: 386 ISGSSDKNVIVWRFSTGEKI--HEIAPAHDDSVLNLRFDHRYLVTCSKDKLIKIWNRKNL 443
Query: 388 EFVRT--LNGHK-RGIACLQYR-DRLVVSGS------SDNTIRLWDIECGACLRVLEGHE 437
+ H+ G++ Y D V+ + N IR +E + L L GH
Sbjct: 444 SPADKDYPSVHQGSGVSYPSYIVDTSVIPSPVLEAEIAKNHIRT--LEPFSLLMTLVGHT 501
Query: 438 ELVRCIRFDAKRIVSGAYDGKIKVWNL 464
V I+ IVS + D IK+WN+
Sbjct: 502 AAVNAIQIHGDEIVSASGDRLIKIWNI 528
Score = 174 (66.3 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 67/266 (25%), Positives = 119/266 (44%)
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRDE-----FQIVSSSHDDTILIWDFLNYSETPIQ 199
H+ + +Q+ + +VSGS D T+R D + H ++L L ++ +P +
Sbjct: 326 HQECVYAIQFIGKWLVSGSRDKTVRVWDLNTKRLWHRPLIGHTKSVLC---LQFNPSPSE 382
Query: 200 XXXXXXXXXXXXXIENNWRMGKFLLQRIN-CRSENSKGVYCLQYDDHKIVSGLRDNTIKV 258
+ WR ++I+ + V L++D +V+ +D IK+
Sbjct: 383 DIIISGSSDKNVIV---WRFSTG--EKIHEIAPAHDDSVLNLRFDHRYLVTCSKDKLIKI 437
Query: 259 WDRVSLQ-CIKVLTG-HTGS-VLCLQY--DERVIISGSSDSTVRVWDVNTGE---MVNTL 310
W+R +L K H GS V Y D VI S ++ + + T E ++ TL
Sbjct: 438 WNRKNLSPADKDYPSVHQGSGVSYPSYIVDTSVIPSPVLEAEIAKNHIRTLEPFSLLMTL 497
Query: 311 IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI 370
+ H AV ++ +V+ S DR I +W++ + ++ VGH + V FD + +
Sbjct: 498 VGHTAAVNAIQIHGDEIVSASGDRLIKIWNIRNG---ACKKTFVGHEKGIACVQFDNQRV 554
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGH 396
VS S D TI++++ +S V L GH
Sbjct: 555 VSGSNDNTIRIFDHASRAEVACLRGH 580
Score = 172 (65.6 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 50/209 (23%), Positives = 95/209 (45%)
Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRY 170
P+ E I+S S D+ + VW S+ E + + H + L++ R +V+ S D I+
Sbjct: 378 PSPSEDIIISGSSDKNVIVWRFSTGEKIHEIAPAHDDSVLNLRFDHRYLVTCSKDKLIKI 437
Query: 171 RDEFQIVSSSHD-DTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWR-MGKFLLQRIN 228
+ + + D ++ ++Y + +N+ R + F L +
Sbjct: 438 WNRKNLSPADKDYPSVHQGSGVSYPSYIVDTSVIPSPVLEAEIAKNHIRTLEPFSL--LM 495
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVII 288
++ V +Q +IVS D IK+W+ + C K GH + C+Q+D + ++
Sbjct: 496 TLVGHTAAVNAIQIHGDEIVSASGDRLIKIWNIRNGACKKTFVGHEKGIACVQFDNQRVV 555
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
SGS+D+T+R++D + V L H + V
Sbjct: 556 SGSNDNTIRIFDHASRAEVACLRGHADLV 584
Score = 123 (48.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 28/83 (33%), Positives = 52/83 (62%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCE-FVRTLNGHKRGIACLQYR----DRLVVSGSSD-NT 167
F K++VS S D+T++VW+ ++ + R L GH + + CLQ+ + +++SGSSD N
Sbjct: 335 FIGKWLVSGSRDKTVRVWDLNTKRLWHRPLIGHTKSVLCLQFNPSPSEDIIISGSSDKNV 394
Query: 168 IRYR----DEFQIVSSSHDDTIL 186
I +R ++ ++ +HDD++L
Sbjct: 395 IVWRFSTGEKIHEIAPAHDDSVL 417
Score = 52 (23.4 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 443 IRFDAKRIVSGAYDGKIKVWNLV 465
I+FDA++I+ + D +I W+ V
Sbjct: 816 IQFDARKIICASQDPRIVGWDFV 838
Score = 51 (23.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 274 TGSVLCLQYDERVIISGSSDSTVRVWD 300
T + +Q+D R II S D + WD
Sbjct: 810 TSRIFKIQFDARKIICASQDPRIVGWD 836
Score = 50 (22.7 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 449 RIVSGAYDGKIKVW 462
RIVSG+YD I +W
Sbjct: 665 RIVSGSYDESIIIW 678
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRV 262
++ +Q+D KI+ +D I WD V
Sbjct: 813 IFKIQFDARKIICASQDPRIVGWDFV 838
Score = 44 (20.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNE 346
+ ++F ++ S+D I WD V +E
Sbjct: 813 IFKIQFDARKIICASQDPRIVGWDFVGDDE 842
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 287 IISGSSDSTVRVWDVNT-GE-MVNTLIHHCEAVLHLRF 322
I+SGS D ++ +W + G+ +V+ + EA + +
Sbjct: 666 IVSGSYDESIIIWKKDRKGQWVVSQNLRQAEAAANAAY 703
Score = 40 (19.1 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 410 VVSGSSDNTIRLW 422
+VSGS D +I +W
Sbjct: 666 IVSGSYDESIIIW 678
Score = 40 (19.1 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 363 VDFDEKYIVSASGDRTIKVWN 383
+ FD + I+ AS D I W+
Sbjct: 816 IQFDARKIICASQDPRIVGWD 836
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 246 KIVSGLRDNTIKVWDR 261
+IVSG D +I +W +
Sbjct: 665 RIVSGSYDESIIIWKK 680
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 73/252 (28%), Positives = 135/252 (53%)
Query: 225 QRINCRSENSKGVYCLQYDD---HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
+ +N + VY + +++ KI +G D T K+W + +C GHT ++CL
Sbjct: 125 EELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 282 YDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIA 337
++ + ++ +GS D+T ++WD+ GE V TL H ++ L F S ++T S D ++
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV 244
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG 395
VWD + ++ +L+GH A ++ F D I++ S D+T K+W+ ++ + V TL G
Sbjct: 245 VWDADTGRKVN---ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG 301
Query: 396 HKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIV 451
H I +C Y +L+ + S+D T R++ C+ LEGHE + I F+ + ++
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 452 SGAYDGKIKVWN 463
+G+ D ++W+
Sbjct: 362 TGSSDKTARIWD 373
Score = 327 (120.2 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 72/239 (30%), Positives = 131/239 (54%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD---ERVIISGS 291
+ CL ++ + +G D T K+WD + + + L GH+ ++ L ++ +R II+GS
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR-IITGS 238
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITL 349
D TV VWD +TG VN LI HC + F+ +++T S D++ +WD + +
Sbjct: 239 FDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVA- 297
Query: 350 RRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
L GH + + D+ K I +AS D T ++++ ++ + + L GH+ I+ + +
Sbjct: 298 --TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 408 R--LVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRC-IRFDAKRIVSGAYDGKIKVW 462
+ +++GSSD T R+WD + G CL+VLEGH +E+ C + +++G+ D ++W
Sbjct: 356 QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 273 (101.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 68/228 (29%), Positives = 116/228 (50%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTG 304
++G D T K+WD S + + L GH V + ++ I +GS D T ++W V TG
Sbjct: 108 ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRAAVN 361
+ +T H ++ L F+ + ++ T S D + +WD+ + E+ TLR GH A +
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR----GHSAEII 223
Query: 362 VVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDN 417
+ F+ I++ S D T+ VW+ + V L GH I+ + D L+++GS D
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDK 283
Query: 418 TIRLWDIECGACLRVLEGHEE--LVRCIRFDAKRIVSGAYDGKIKVWN 463
T +LWD G C+ L GH++ L C + K I + + DG ++++
Sbjct: 284 TCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Score = 224 (83.9 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 63/208 (30%), Positives = 103/208 (49%)
Query: 268 KVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN- 324
KVL H + + L I+GS D T ++WD +GE +NTL H V + F+N
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 325 --GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIK 380
+ T S D++ +W + + R GH A + + F+ + + A+G D T K
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFR---GHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
+W+ + E V TL GH I L + DR +++GS D+T+ +WD + G + +L GH
Sbjct: 203 LWDIQNGEEVYTLRGHSAEIISLSFNTSGDR-IITGSFDHTVVVWDADTGRKVNILIGHC 261
Query: 438 ELVRCIRF--DAKRIVSGAYDGKIKVWN 463
+ F D I++G+ D K+W+
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLWD 289
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 58/202 (28%), Positives = 93/202 (46%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGS 163
+ ISL N I++ S D T+ VW+ + V L GH I+ + D L+++GS
Sbjct: 221 EIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGS 280
Query: 164 SDNTIRYRDEF--QIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM 219
D T + D + V++ HDD IL F +Y+ I
Sbjct: 281 MDKTCKLWDATNGKCVATLTGHDDEILDSCF-DYTGKLIATASADGTARIFSAATR---- 335
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL- 278
K + + E SK + Q +H +++G D T ++WD + QC++VL GHT +
Sbjct: 336 -KCIAKLEGHEGEISKISFNPQ-GNH-LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS 392
Query: 279 C-LQYDERVIISGSSDSTVRVW 299
C Y ++I+GS D+T R+W
Sbjct: 393 CAFNYKGNIVITGSKDNTCRIW 414
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 349 LRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-- 404
L +VL H + V ++ ++ S DRT K+W+T+S E + TL GH+ + +
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 405 --YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIK 460
Y D+ + +GS D T +LW +E G C GH + C+ F+ + + +G+ D K
Sbjct: 144 NPYGDK-IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 461 VWNL 464
+W++
Sbjct: 203 LWDI 206
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 61/282 (21%), Positives = 112/282 (39%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178
I + S D+T K+W+ + + T GH I CL + + +T+ + +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ--------STL-------VAT 194
Query: 179 SSHDDTILIWDFLNYSET-PIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGV 237
S D T +WD N E ++ + G F + ++ + V
Sbjct: 195 GSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Query: 238 -----YCLQ-------YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQYD 283
+C + +D I++G D T K+WD + +C+ LTGH +L C Y
Sbjct: 255 NILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYT 314
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMV 342
++I + S+D T R++ T + + L H + + F+ G + A
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA 374
Query: 343 SPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
+ +VL GH + F+ K +++ S D T ++W
Sbjct: 375 QTGQCL--QVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 87 (35.7 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 72 SEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLP---NFDEKYIVSASGDRTI 128
S +Q+ + L H YL +L+ + L N ++ S DRT
Sbjct: 58 SRTEQVKLLIQRLQEKLGQNSNH-TFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTC 116
Query: 129 KVWNTSSCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIR 169
K+W+T+S E + TL GH+ + + Y D+ + +GS D T +
Sbjct: 117 KLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK-IATGSFDKTCK 160
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 308 (113.5 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 73/235 (31%), Positives = 125/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + +VS D T+K+WD S +C+K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T HK C+ + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH ++V + I++ A D IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 56/163 (34%), Positives = 93/163 (57%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D++ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 271 (100.5 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 68/232 (29%), Positives = 122/232 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D IK+W + K ++GH G S + D +++S S D T+++WDV++G
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H V F+ + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSA 176
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 417
V F D IVS+S D ++W+T+S + ++TL + ++ +++ + +++ + DN
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ H+ CI F K IVSG+ D + +WNL
Sbjct: 237 TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 246 (91.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 48/129 (37%), Positives = 79/129 (61%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN TL+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 31 VKPN-YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + L+VS S D T+++WD+ G CL+ L+GH V C F+ + IVSG++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 150 DESVRIWDV 158
Score = 222 (83.2 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 76/306 (24%), Positives = 136/306 (44%)
Query: 141 TLNGHKRGIACLQY--RDRLVVSGSSDNTIR----YRDEFQIVSSSHDDTILIWDFLNYS 194
TL GH + ++ +++ + S S+D I+ Y +F+ S H + I D S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS 97
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLR 252
++ + + + GK L +S V+C ++ IVSG
Sbjct: 98 DSNLLVSASDDKTLKIWDVSS----GKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310
D ++++WD + +C+K L H+ V + + D +I+S S D R+WD +G+ + TL
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 311 IHHCEA-VLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAV--NVVDF 365
I V ++FS NG + + D ++ +WD + + + N
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVT 269
Query: 366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGS--SDNTIR 420
K+IVS S D + +WN + E V+ L GH + AC + ++ S + +D TI+
Sbjct: 270 GGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIK 328
Query: 421 LWDIEC 426
LW +C
Sbjct: 329 LWKSDC 334
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D ++++W+ + + ++TL H ++ + + RD L+VS S D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q + + DD F+ +S P + + + GK L+
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKLWD-YSKGK-CLKTYT 253
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
C +N K YC+ K IVSG DN + +W+ + + ++ L GHT V+
Sbjct: 254 CH-KNEK--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACH 310
Query: 282 YDERVIISGS--SDSTVRVW 299
E +I S + +D T+++W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D +VSAS D+T+K+W+ SS + ++TL GH + C + + L+VSGS D ++R D
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Score = 104 (41.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + L+VS S D
Sbjct: 51 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 108
Query: 166 NTIRYRD 172
T++ D
Sbjct: 109 KTLKIWD 115
Score = 102 (41.0 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S+S D+ IK+W +F +T++GHK GI+ D V+ SSD+ + +
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----D---VAWSSDSNL-------L 102
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ IWD
Sbjct: 103 VSASDDKTLKIWD 115
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 394 (143.8 bits), Expect = 7.7e-36, P = 7.7e-36
Identities = 91/255 (35%), Positives = 136/255 (53%)
Query: 214 ENNWRMGKFLLQRINCRSENSKG----VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV 269
+N+ R+ + Q + C + KG V + Y+D + SG D++IKVWD L+CI
Sbjct: 479 DNSIRVYDYKSQNMEC-VQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFT 537
Query: 270 LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVT 329
L GH V + +++ + SGSSD T++VWD+ T E TL H AV L S + +
Sbjct: 538 LEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFS 597
Query: 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF 389
S D++I VWD+ + L GH V + + S S D+TI+VWN S E
Sbjct: 598 GSNDKTIKVWDLKT---FRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLEC 654
Query: 390 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DA 447
TL GH R + + D+L+ + S DNTI++WD+E C LEGH V+C+ D
Sbjct: 655 SATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDK 714
Query: 448 KRIVSGAYDGKIKVW 462
K ++S ++D I+VW
Sbjct: 715 KCVISCSHDQSIRVW 729
Score = 326 (119.8 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 78/257 (30%), Positives = 135/257 (52%)
Query: 215 NNWRMGKFLLQRINCRSENSKGVYCLQY---DDHKIVSGLRDNTIKVWDRVS--LQCIKV 269
NN + L+ I E KG + + D+ + +G DN+I+V+D S ++C++
Sbjct: 439 NNKKKESINLETIKL-IETIKGYHVTSHLCICDNLLFTGCSDNSIRVYDYKSQNMECVQT 497
Query: 270 LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVT 329
L GH G V + Y+++ + SGSSD +++VWD+ + TL H + V + ++ + +
Sbjct: 498 LKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFS 557
Query: 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN--TSSC 387
S D++I VWD+ + + + L H AV + +Y+ S S D+TIKVW+ T C
Sbjct: 558 GSSDKTIKVWDLKT---LECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRC 614
Query: 388 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA 447
+ TL GH + + + + SGS D TIR+W+++ C L GH+ V +
Sbjct: 615 NY--TLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICD 672
Query: 448 KRIVSGAYDGKIKVWNL 464
K + + + D IK+W+L
Sbjct: 673 KLLFTASDDNTIKIWDL 689
Score = 251 (93.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 74/274 (27%), Positives = 129/274 (47%)
Query: 116 EKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
+ + + D +I+V++ S E V+TL GH+ + + Y D+ + SGSSD++I+ D
Sbjct: 470 DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDL 529
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR--- 230
++ I+ L + P+ + ++ L+ + C+
Sbjct: 530 KKLRC--------IFT-LEGHDKPVHTVLLNDKYLFSGSSDKTIKVWD--LKTLECKYTL 578
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
+++ V L + SG D TIKVWD + +C L GHT V + + SG
Sbjct: 579 ESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSG 638
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR 350
S D T+RVW++ + E TL H V H+ + ++ T S D +I +WD+ + +
Sbjct: 639 SYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLET---LRCN 695
Query: 351 RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW 382
L GH A V + D+K ++S S D++I+VW
Sbjct: 696 TTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 187 (70.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 58/192 (30%), Positives = 86/192 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD-- 172
++KY+ S S D+TIKVW+ + E TL H R + L + + SGS+D TI+ D
Sbjct: 551 NDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLK 610
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSE 232
F+ + T W T I W + K L R
Sbjct: 611 TFRCNYTLKGHTK--W------VTTICILGTNLYSGSYDKTIRVWNL-KSLECSATLRGH 661
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG 290
+ + V + D + + DNTIK+WD +L+C L GH +V CL D++ +IS
Sbjct: 662 D-RWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISC 720
Query: 291 SSDSTVRVWDVN 302
S D ++RVW N
Sbjct: 721 SHDQSIRVWGWN 732
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 320 (117.7 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 76/244 (31%), Positives = 122/244 (50%)
Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIIS 289
EN D IVS D T+K+WD + IK L GHT C+ ++ + +I+S
Sbjct: 71 ENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVS 130
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEI 347
GS D TVR+WDV TG+ + L H + V + F+ ++V+ S D +WD S
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD--SGTGH 188
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
++ ++ V+ V F K+I+ + D T+++WN SS +F++T GH C+
Sbjct: 189 CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS 248
Query: 406 -----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGK 458
+ +VSGS DN + +W++ L+ LEGH E V + I SG+ D
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKT 308
Query: 459 IKVW 462
+++W
Sbjct: 309 VRIW 312
Score = 279 (103.3 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 72/242 (29%), Positives = 124/242 (51%)
Query: 243 DDHKIVSGLRDNTIKVW------DRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDS 294
D + S D TI+ + D ++ + ++ TGH + + D R I+S S D
Sbjct: 35 DGRLLASASADKTIRTYTINTINDPIA-EPVQEFTGHENGISDVAFSSDARFIVSASDDK 93
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
T+++WDV TG ++ TLI H + F+ + M+V+ S D ++ +WD+ + + +V
Sbjct: 94 TLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCL---KV 150
Query: 353 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RD 407
L H V VDF D IVS+S D ++W++ + V+TL + ++ +++
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--F---DAKRIVSGAYDGKIKVW 462
+ ++ G+ DNT+RLW+I L+ GH CI F + KRIVSG+ D + +W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 463 NL 464
L
Sbjct: 271 EL 272
Score = 264 (98.0 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 56/165 (33%), Positives = 94/165 (56%)
Query: 309 TLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRV--LVGHRAAVNVVD 364
TL H AV ++FS+ ++ + S D++I + + + N+ V GH ++ V
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 365 F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR 420
F D ++IVSAS D+T+K+W+ + ++TL GH C+ + + ++VSGS D T+R
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 421 LWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
+WD+ G CL+VL H + V + F D IVS +YDG ++W+
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 151 (58.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 53/215 (24%), Positives = 94/215 (43%)
Query: 99 LKPMLQRDFISLLPNFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-R 155
+K ++ + NF+ + IVS S D T+++W+ ++ + ++ L H + + + R
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 156 D-RLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXX--XXXXXXXX 212
D L+VS S D R D + H LI D P+
Sbjct: 166 DGSLIVSSSYDGLCRIWDS----GTGHCVKTLIDD----ENPPVSFVRFSPNGKFILVGT 217
Query: 213 IENNWRMGKFLLQR-INCRSENSKGVYCLQY-----DDHKIVSGLRDNTIKVWDRVSLQC 266
++N R+ + + + + YC+ + +IVSG DN + +W+ S +
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Query: 267 IKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVW 299
++ L GHT +V+ E +I SGS D TVR+W
Sbjct: 278 LQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D ++IVSAS D+T+K+W+ + ++TL GH C+ + + ++VSGS D T+R D
Sbjct: 82 DARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWD 141
Query: 173 ----EFQIVSSSHDDTILIWDF 190
+ V +H D + DF
Sbjct: 142 VTTGKCLKVLPAHSDPVTAVDF 163
Score = 82 (33.9 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 115 DEKYIVSASGDRTIKVW--NTSS---CEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT 167
D + + SAS D+TI+ + NT + E V+ GH+ GI+ + + R +VS S D T
Sbjct: 35 DGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKT 94
Query: 168 IRYRD 172
++ D
Sbjct: 95 LKLWD 99
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 320 (117.7 bits), Expect = 4.7e-34, Sum P(2) = 4.7e-34
Identities = 79/236 (33%), Positives = 128/236 (54%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWD 300
D ++VS D T+KVWD S +C+K L GH+ V C ++ +I+SGS D +V++W+
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 301 VNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + + + F+ NG ++V+ S D +WD S LR +
Sbjct: 152 VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ--CLRTLADEGNP 209
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL--QYR---DRLVV 411
V+ V F KYI++A+ D T+K+W+ S ++T GHK CL + + VV
Sbjct: 210 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVV 269
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAY---DGKIKVWN 463
SGS DN + +W+++ ++ L+GH ++V K I++ A D IKVW+
Sbjct: 270 SGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS 325
Score = 257 (95.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 63/232 (27%), Positives = 119/232 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ S D I +W C K L GH+ + + + D ++S S D T++VWD+ +G
Sbjct: 54 LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSG 113
Query: 305 EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + TL H + V F+ + ++V+ S D S+ +W++ + + + L H ++
Sbjct: 114 KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCL---KTLSAHSDPISA 170
Query: 363 VDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-IACLQY--RDRLVVSGSSDN 417
V+F+ IVS S D ++W+ +S + +RTL ++ +++ + +++ + DN
Sbjct: 171 VNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDN 230
Query: 418 TIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
T++LWD G CL+ GH+ C+ F K +VSG+ D + +WNL
Sbjct: 231 TLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Score = 219 (82.2 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 58/213 (27%), Positives = 110/213 (51%)
Query: 233 NSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVII 288
+S V+C ++ + IVSG D ++K+W+ + +C+K L+ H+ + + ++ +I+
Sbjct: 122 HSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIV 181
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEA-VLHLRFS-NGMMV-TCSKDRSIAVWDMVSPN 345
SGS D R+WD +G+ + TL V ++FS NG + T + D ++ +WD
Sbjct: 182 SGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGR 241
Query: 346 EITLRRVLVGHR-------AAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ + GH+ A+ +V K++VS S D + +WN + E V+ L GH
Sbjct: 242 CL---KTYTGHKNEKYCLFASFSVTG--RKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296
Query: 399 GI---ACLQYRDRLVVSGS--SDNTIRLWDIEC 426
+ AC ++ ++ S + +D TI++W +C
Sbjct: 297 VVISAACHPTKN-IIASAALENDKTIKVWSSDC 328
Score = 202 (76.2 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 53/158 (33%), Positives = 81/158 (51%)
Query: 344 PNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 401
PN LR L GH AA++ V F +++ S++ D I +W +TL GH I+
Sbjct: 27 PN-YALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEIS 85
Query: 402 CLQYRD---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYD 456
+ + RLV S S D T+++WD+ G CL+ L+GH + V C F+ + IVSG++D
Sbjct: 86 DVAWSSDSSRLV-SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 457 GKIKVWN---------LVAALDPRAPTTTLCLRTLVVS 485
+K+W L A DP + C +L+VS
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/208 (24%), Positives = 88/208 (42%)
Query: 106 DFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSG 162
DF+ N IVS S D ++K+W + + ++TL+ H I+ + + L+VSG
Sbjct: 124 DFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSG 183
Query: 163 SSDNTIRYRDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
S D R D Q + + D+ F+ +S P + W
Sbjct: 184 SYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFS--PNGKYILTATLDNTLKL---WDYS 238
Query: 221 KFLLQRINCRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275
+ + +N K YCL K +VSG DN + +W+ + + ++ L GHT
Sbjct: 239 RGRCLKTYTGHKNEK--YCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296
Query: 276 SVL--CLQYDERVIISGS--SDSTVRVW 299
V+ + +I S + +D T++VW
Sbjct: 297 VVISAACHPTKNIIASAALENDKTIKVW 324
Score = 67 (28.6 bits), Expect = 4.7e-34, Sum P(2) = 4.7e-34
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176
+++ S++ D I +W +TL GH L+ D V+ SSD++ ++
Sbjct: 52 EWLASSAADALIIIWGAYDGNCKKTLYGHS-----LEISD---VAWSSDSS-------RL 96
Query: 177 VSSSHDDTILIWD 189
VS+S D T+ +WD
Sbjct: 97 VSASDDKTLKVWD 109
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 315 (115.9 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 78/249 (31%), Positives = 130/249 (52%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYD--ERVI 287
+S G+ L + D H S D T+++WD R +C+KVL GHT V C+ ++ +I
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLI 143
Query: 288 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPN 345
+SGS D T+R+W+V TG+ V + H + +H ++V+ S D S +WD
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA---K 200
Query: 346 EITLRRVLVGHRA-AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
E T + L+ ++ AV+ F K+I+ A+ D T+K+ N ++ +F++ GH + C
Sbjct: 201 EGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC 260
Query: 403 LQY-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV---RCIRFDAKRIVSGA 454
+ + +VSGS DN + LWD++ L+ LEGH + V C + SG
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGN 320
Query: 455 Y-DGKIKVW 462
+ D I++W
Sbjct: 321 HLDKTIRIW 329
Score = 247 (92.0 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 63/208 (30%), Positives = 105/208 (50%)
Query: 267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN 324
+K L GHT ++ C+++ D ++ S S D T+ +W +++ H + L +S+
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 325 GMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIK 380
TCS D ++ +WD SP E +VL GH V V+F+ IVS S D TI+
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECL--KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 437
+W + + VR + H I+ + + RD L+VS S D + ++WD + G CL+ L +
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Query: 438 ELVRCIRF--DAKRIVSGAYDGKIKVWN 463
V +F + K I+ D +K+ N
Sbjct: 214 PAVSFAKFSPNGKFILVATLDSTLKLSN 241
Score = 241 (89.9 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 57/186 (30%), Positives = 101/186 (54%)
Query: 307 VNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
+ TL H A+ ++FSN ++ + S D+++ +W + N + R GH + ++ +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWS--ATNYSLIHRY-EGHSSGISDLA 92
Query: 365 F--DEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 419
+ D Y SAS D T+++W+ S E ++ L GH + C+ + L+VSGS D TI
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETI 152
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTL 477
R+W+++ G C+R+++ H + + F D IVS ++DG K+W D + T
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW------DAKEGT--- 203
Query: 478 CLRTLV 483
CL+TL+
Sbjct: 204 CLKTLI 209
Score = 219 (82.2 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 65/251 (25%), Positives = 122/251 (48%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII 288
++ + C+++ D + + S D T+ +W + I GH+ + L + D
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTC 101
Query: 289 SGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPN 345
S S D T+R+WD + E + L H V + F+ + ++V+ S D +I +W++ +
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 346 EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIAC 402
+ R++ H ++ V F D IVSAS D + K+W+ ++TL K ++
Sbjct: 162 CV---RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSF 218
Query: 403 LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--F---DAKRIVSGAY 455
++ + ++ + D+T++L + G L+V GH V CI F + K IVSG+
Sbjct: 219 AKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSE 278
Query: 456 DGKIKVWNLVA 466
D + +W+L A
Sbjct: 279 DNCVYLWDLQA 289
Score = 171 (65.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 72/287 (25%), Positives = 127/287 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRY-- 170
D + SAS D+T+ +W+ ++ + GH GI+ L + S S D T+R
Sbjct: 54 DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD 113
Query: 171 -RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM--GKFLLQRI 227
R ++ + T ++ +N++ P I W + GK ++ I
Sbjct: 114 ARSPYECLKVLRGHTNFVF-CVNFN--PPSNLIVSGSFDETIRI---WEVKTGK-CVRMI 166
Query: 228 NCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQYDE-- 284
S V+ D IVS D + K+WD C+K L +V ++
Sbjct: 167 KAHSMPISSVH-FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNG 225
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR--FS--NGM-MVTCSKDRSIAVW 339
+ I+ + DST+++ + TG+ + H V + FS NG +V+ S+D + +W
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Query: 340 DMVSPNEITLRRVLVGHR-AAVNVVDFDEKYIVSASG---DRTIKVW 382
D+ + N L+R L GH A ++V + +S+SG D+TI++W
Sbjct: 286 DLQARN--ILQR-LEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 60 (26.2 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194
++TL GH I+C+++ S+D + + S+S D T+++W NYS
Sbjct: 36 LKTLEGHTAAISCVKF--------SNDGNL-------LASASVDKTMILWSATNYS 76
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 276 (102.2 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 66/225 (29%), Positives = 109/225 (48%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTV 296
C D I S D++I++WD +C+ VL GH SV + + D + + SG D
Sbjct: 75 CFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRA 134
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
VW+V +G V+ L+ HC+++ FS + + T S D ++ +WD+ + + L
Sbjct: 135 IVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE 194
Query: 355 GHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRL-VV 411
GH ++ + + + S S D+TI VW ++ L GH + L + D L +
Sbjct: 195 GHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLA 254
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
S T+++WD G CL L+G ++ F D K +VSGA
Sbjct: 255 SAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 245 (91.3 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 73/252 (28%), Positives = 116/252 (46%)
Query: 226 RINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
R+ ++ V C + D +++ D + VW S + + L GH G V C
Sbjct: 18 RVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFS 77
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVW 339
D R+I S SSD ++R+WDV + ++ L H +V + FS + + + D+ VW
Sbjct: 78 PDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNT-SSCEFV--RTLN 394
++ S + L LVGH ++ DF + + S D T+ +W+ +S V L
Sbjct: 138 EVQSGRRVHL---LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE 194
Query: 395 GHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV 451
GH I+CL Y L+ SGS D TI +W L+GH V + F D ++
Sbjct: 195 GHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLA 254
Query: 452 SGAYDGKIKVWN 463
S Y +KVW+
Sbjct: 255 SAGYSRTVKVWD 266
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 46/130 (35%), Positives = 70/130 (53%)
Query: 343 SPNEITLRRV-LVG-HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+P + + RV G H VN F D + +++AS D + VW T S + L GH+
Sbjct: 10 APTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRG 69
Query: 399 GI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ C RL+ S SSD++IRLWD+ CL VL+GH+ V + F D+K++ SG
Sbjct: 70 PVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGG 129
Query: 455 YDGKIKVWNL 464
+D + VW +
Sbjct: 130 WDKRAIVWEV 139
Score = 177 (67.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 57/183 (31%), Positives = 93/183 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVWD 300
D ++ SG D VW+ S + + +L GH S+ + + +GS DSTV +WD
Sbjct: 121 DSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWD 180
Query: 301 VNTGEMV---NTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+ V + L H + L +S +G++ + S D++I VW + N + L+ L GH
Sbjct: 181 LRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTT-NNLPLQ--LKGH 237
Query: 357 RAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRD-RLVVS 412
VN + F DE + SA RT+KVW+ + + + TL G AC+ D +L+VS
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVS 297
Query: 413 GSS 415
G++
Sbjct: 298 GAA 300
Score = 168 (64.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 42/163 (25%), Positives = 80/163 (49%)
Query: 312 HHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK 368
HH E +G ++T S D + VW S + R L GHR V F D +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKS-GRLLWR--LAGHRGPVKSCCFSPDGR 81
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC 426
I S+S D +I++W+ + + + L GH+R + + + + + SG D +W+++
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVWNLVAA 467
G + +L GH + ++ F + + +G++D + +W+L A+
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAS 184
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 49/203 (24%), Positives = 80/203 (39%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
D + I S+S D +I++W+ + + + L GH+R + + + + + SG D R
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK----RA 134
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRINCR 230
V S +L+ + + + W R ++ N
Sbjct: 135 IVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE 194
Query: 231 SENSKGVYCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVI 287
+ CL Y ++ SG D TI VW + L GHT V L + DE +
Sbjct: 195 GHTGN-ISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKL 253
Query: 288 ISGSSDSTVRVWDVNTGEMVNTL 310
S TV+VWD TG+ + TL
Sbjct: 254 ASAGYSRTVKVWDCLTGKCLETL 276
Score = 89 (36.4 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRYRD 172
D + +++AS D + VW T S + L GH+ + C RL+ S SSD++IR D
Sbjct: 37 DGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWD 96
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 348 (127.6 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 112/395 (28%), Positives = 181/395 (45%)
Query: 72 SEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVW 131
SE +Q V LL + N + L+RD +S +P I+S +T+
Sbjct: 263 SEANQNHLVFKLLQKTTRPTLSTFNNLINNSLKRDILSNVPFEVTMKILSYLDYKTLLSV 322
Query: 132 NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFL 191
++ +N I L+ RD+L+ + D I+Y E Q + D +L
Sbjct: 323 AQVCKKWFDIINNPDTWIKLLK-RDKLI---TDDAVIKY--ELQ-----YPDQLL----R 367
Query: 192 NYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL 251
+S P + I N W KF RI+ +K V CLQ+DD K+V+G+
Sbjct: 368 EWSTLP-EINSAQVLYKKRKIIVNRWMDPKFKPHRISVSGHGNKVVTCLQHDDEKVVTGV 426
Query: 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
D I ++ + Q +KVL GH G V L+Y +++GS+D TVRVW++ TG+ +
Sbjct: 427 DDKCILIYSTQTGQLMKVLEGHEGGVWALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFR 486
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L + ++ ++D V+ P IT R H + VVD + YI
Sbjct: 487 GHTSTIRCLDIIHPAVIGKNQDGEDIVFPEY-PLLITGSRDHNIHVWKLPVVDDSQDYIE 545
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI-ECGACL 430
+ G+ + + L+GH + + + +++SGS D+T+R+WD+ + G C
Sbjct: 546 TFEGE-------FDNPYLIAVLSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCT 598
Query: 431 RVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWN 463
VL+GH + V I F +K SG+ D I VWN
Sbjct: 599 HVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWN 633
Score = 272 (100.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 68/190 (35%), Positives = 105/190 (55%)
Query: 267 IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV-NTGEMVNTLIHHCEAVLH--LRFS 323
I VL+GHT SV + +IISGS DSTVRVWD+ + G + L H + V + F
Sbjct: 557 IAVLSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFH 616
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
+ + S D +I VW+ + L++VLVGH + V ++D + +VSA+ D T+++W+
Sbjct: 617 SKTCFSGSMDSNINVWNFETGE---LKKVLVGHASLVGLLDLVDDVLVSAAADATLRIWD 673
Query: 384 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRC 442
+ E L GH I C ++ VVSGS + ++LW++E G R +L +
Sbjct: 674 AKTGELRSKLKGHGAAITCFEHDGLRVVSGS-EKMLKLWNVEKGTFARDLLSDVTGGIWQ 732
Query: 443 IRFDAKRIVS 452
+RFD KR V+
Sbjct: 733 VRFDYKRCVA 742
Score = 228 (85.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/161 (31%), Positives = 82/161 (50%)
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVV 363
++ L H ++V + ++++ S D ++ VWD++ T VL GH R +
Sbjct: 556 LIAVLSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCT--HVLQGHLDRVYSTAI 613
Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
DF K S S D I VWN + E + L GH + L D ++VS ++D T+R+WD
Sbjct: 614 DFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLVGLLDLVDDVLVSAAADATLRIWD 673
Query: 424 IECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ G L+GH + C D R+VSG+ + +K+WN+
Sbjct: 674 AKTGELRSKLKGHGAAITCFEHDGLRVVSGS-EKMLKLWNV 713
Score = 186 (70.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 51/199 (25%), Positives = 98/199 (49%)
Query: 270 LTGHTGSVL-CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMV 328
++GH V+ CLQ+D+ +++G D + ++ TG+++ L H V L+++ +V
Sbjct: 404 VSGHGNKVVTCLQHDDEKVVTGVDDKCILIYSTQTGQLMKVLEGHEGGVWALKYTGNTLV 463
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE 388
T S DR++ VW+M + + T + GH + + +D ++ + D V+ E
Sbjct: 464 TGSTDRTVRVWNMKT-GQCT--HIFRGHTSTIRCLDIIHPAVIGKNQDGEDIVFP----E 516
Query: 389 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFD 446
+ + G + + +L V S + I ++ E + VL GH + VR I
Sbjct: 517 YPLLITGSRDHNIHVW---KLPVVDDSQDYIETFEGEFDNPYLIAVLSGHTQSVRSISGY 573
Query: 447 AKRIVSGAYDGKIKVWNLV 465
I+SG+YD ++VW+L+
Sbjct: 574 GNIIISGSYDSTVRVWDLL 592
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
VY D H SG D+ I VW+ + + KVL GH V L + V++S ++D+
Sbjct: 608 VYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLVGLLDLVDDVLVSAAADA 667
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
T+R+WD TGE+ + L H A+ +G+ V ++ + +W++ + T R L+
Sbjct: 668 TLRIWDAKTGELRSKLKGHGAAITCFEH-DGLRVVSGSEKMLKLWNV---EKGTFARDLL 723
Query: 355 GH-RAAVNVVDFDEKYIVSA 373
+ V FD K V+A
Sbjct: 724 SDVTGGIWQVRFDYKRCVAA 743
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 25/74 (33%), Positives = 46/74 (62%)
Query: 392 TLNGH-KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI 450
+++GH + + CLQ+ D VV+G D I ++ + G ++VLEGHE V +++ +
Sbjct: 403 SVSGHGNKVVTCLQHDDEKVVTGVDDKCILIYSTQTGQLMKVLEGHEGGVWALKYTGNTL 462
Query: 451 VSGAYDGKIKVWNL 464
V+G+ D ++VWN+
Sbjct: 463 VTGSTDRTVRVWNM 476
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 348 (127.6 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 112/395 (28%), Positives = 181/395 (45%)
Query: 72 SEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVW 131
SE +Q V LL + N + L+RD +S +P I+S +T+
Sbjct: 263 SEANQNHLVFKLLQKTTRPTLSTFNNLINNSLKRDILSNVPFEVTMKILSYLDYKTLLSV 322
Query: 132 NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFL 191
++ +N I L+ RD+L+ + D I+Y E Q + D +L
Sbjct: 323 AQVCKKWFDIINNPDTWIKLLK-RDKLI---TDDAVIKY--ELQ-----YPDQLL----R 367
Query: 192 NYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL 251
+S P + I N W KF RI+ +K V CLQ+DD K+V+G+
Sbjct: 368 EWSTLP-EINSAQVLYKKRKIIVNRWMDPKFKPHRISVSGHGNKVVTCLQHDDEKVVTGV 426
Query: 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
D I ++ + Q +KVL GH G V L+Y +++GS+D TVRVW++ TG+ +
Sbjct: 427 DDKCILIYSTQTGQLMKVLEGHEGGVWALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFR 486
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L + ++ ++D V+ P IT R H + VVD + YI
Sbjct: 487 GHTSTIRCLDIIHPAVIGKNQDGEDIVFPEY-PLLITGSRDHNIHVWKLPVVDDSQDYIE 545
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI-ECGACL 430
+ G+ + + L+GH + + + +++SGS D+T+R+WD+ + G C
Sbjct: 546 TFEGE-------FDNPYLIAVLSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCT 598
Query: 431 RVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWN 463
VL+GH + V I F +K SG+ D I VWN
Sbjct: 599 HVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWN 633
Score = 272 (100.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 68/190 (35%), Positives = 105/190 (55%)
Query: 267 IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV-NTGEMVNTLIHHCEAVLH--LRFS 323
I VL+GHT SV + +IISGS DSTVRVWD+ + G + L H + V + F
Sbjct: 557 IAVLSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFH 616
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
+ + S D +I VW+ + L++VLVGH + V ++D + +VSA+ D T+++W+
Sbjct: 617 SKTCFSGSMDSNINVWNFETGE---LKKVLVGHASLVGLLDLVDDVLVSAAADATLRIWD 673
Query: 384 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRC 442
+ E L GH I C ++ VVSGS + ++LW++E G R +L +
Sbjct: 674 AKTGELRSKLKGHGAAITCFEHDGLRVVSGS-EKMLKLWNVEKGTFARDLLSDVTGGIWQ 732
Query: 443 IRFDAKRIVS 452
+RFD KR V+
Sbjct: 733 VRFDYKRCVA 742
Score = 228 (85.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/161 (31%), Positives = 82/161 (50%)
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVV 363
++ L H ++V + ++++ S D ++ VWD++ T VL GH R +
Sbjct: 556 LIAVLSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCT--HVLQGHLDRVYSTAI 613
Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
DF K S S D I VWN + E + L GH + L D ++VS ++D T+R+WD
Sbjct: 614 DFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLVGLLDLVDDVLVSAAADATLRIWD 673
Query: 424 IECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ G L+GH + C D R+VSG+ + +K+WN+
Sbjct: 674 AKTGELRSKLKGHGAAITCFEHDGLRVVSGS-EKMLKLWNV 713
Score = 186 (70.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 51/199 (25%), Positives = 98/199 (49%)
Query: 270 LTGHTGSVL-CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMV 328
++GH V+ CLQ+D+ +++G D + ++ TG+++ L H V L+++ +V
Sbjct: 404 VSGHGNKVVTCLQHDDEKVVTGVDDKCILIYSTQTGQLMKVLEGHEGGVWALKYTGNTLV 463
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE 388
T S DR++ VW+M + + T + GH + + +D ++ + D V+ E
Sbjct: 464 TGSTDRTVRVWNMKT-GQCT--HIFRGHTSTIRCLDIIHPAVIGKNQDGEDIVFP----E 516
Query: 389 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFD 446
+ + G + + +L V S + I ++ E + VL GH + VR I
Sbjct: 517 YPLLITGSRDHNIHVW---KLPVVDDSQDYIETFEGEFDNPYLIAVLSGHTQSVRSISGY 573
Query: 447 AKRIVSGAYDGKIKVWNLV 465
I+SG+YD ++VW+L+
Sbjct: 574 GNIIISGSYDSTVRVWDLL 592
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
VY D H SG D+ I VW+ + + KVL GH V L + V++S ++D+
Sbjct: 608 VYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLVGLLDLVDDVLVSAAADA 667
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
T+R+WD TGE+ + L H A+ +G+ V ++ + +W++ + T R L+
Sbjct: 668 TLRIWDAKTGELRSKLKGHGAAITCFEH-DGLRVVSGSEKMLKLWNV---EKGTFARDLL 723
Query: 355 GH-RAAVNVVDFDEKYIVSA 373
+ V FD K V+A
Sbjct: 724 SDVTGGIWQVRFDYKRCVAA 743
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 25/74 (33%), Positives = 46/74 (62%)
Query: 392 TLNGH-KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI 450
+++GH + + CLQ+ D VV+G D I ++ + G ++VLEGHE V +++ +
Sbjct: 403 SVSGHGNKVVTCLQHDDEKVVTGVDDKCILIYSTQTGQLMKVLEGHEGGVWALKYTGNTL 462
Query: 451 VSGAYDGKIKVWNL 464
V+G+ D ++VWN+
Sbjct: 463 VTGSTDRTVRVWNM 476
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 353 (129.3 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 96/366 (26%), Positives = 164/366 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
D + + SASGD T+K+W+T++ TL GH + + + RL+ S S D T++ D
Sbjct: 274 DSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWD 333
Query: 173 E----FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
Q + H+D++ F + S I W LL+
Sbjct: 334 TATGTLQRMLKGHNDSVRSVVFSHDSRL-----IASGSNDRTVRI---WETTTGLLRHTF 385
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
E+S +D ++ S +K+WD + VL GH V + + D R+
Sbjct: 386 EDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRL 445
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
+ S S D TV++W TG + TL H + V + FS+ ++ + S D ++ +WD +
Sbjct: 446 LASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT- 504
Query: 345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
+ L+ L H V V F D + + SAS D T+K+W+T++ TL GH +
Sbjct: 505 --VPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNS 562
Query: 403 LQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGK 458
+ + RL+ S S D T+++W G +G + + F + + S DG
Sbjct: 563 VSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGT 622
Query: 459 IKVWNL 464
+K+W++
Sbjct: 623 VKIWDM 628
Score = 340 (124.7 bits), Expect = 3.5e-28, P = 3.5e-28
Identities = 90/335 (26%), Positives = 150/335 (44%)
Query: 144 GHKRGIACLQYR--DRLVVSGSSDNTIRYRDE----FQIVSSSHDDTILIWDFLNYSETP 197
GH R + + + RL+ S S D T++ D Q H++ + F + S
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL- 319
Query: 198 IQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257
I W LQR+ +S +D I SG D T++
Sbjct: 320 ----LASASDDGTVKI---WDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVR 372
Query: 258 VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+W+ + H SV+ + + D R + S S V++WD TG + N L H +
Sbjct: 373 IWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDD 432
Query: 316 AVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
V + FS + ++ + S DR++ +W + + L+R L GH V V F D + I
Sbjct: 433 CVNSVSFSPDSRLLASASDDRTVKIWHAATGS---LQRTLEGHNDWVRSVVFSHDSRLIA 489
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC 429
SAS D T+K+W+T++ L H + + + RL+ S S D T+++WD G+
Sbjct: 490 SASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSL 549
Query: 430 LRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
LEGH++ V + F D++ + S + DG +K+W
Sbjct: 550 ENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 329 (120.9 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 94/352 (26%), Positives = 159/352 (45%)
Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDN 166
S++ + D + + SAS D T+K+W+T++ R L GH + + + RL+ SGS+D
Sbjct: 310 SVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDR 369
Query: 167 TIRYRDE----FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKF 222
T+R + + H+D+++ F + S I + R G
Sbjct: 370 TVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRR-----LASASDGGNVKIWDT-RTGS- 422
Query: 223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCL 280
LQ + ++ D + S D T+K+W + + L GH V +
Sbjct: 423 -LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVF 481
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAV 338
+D R+I S S D TV++WD T + N L H V + FS+ ++ + S D ++ +
Sbjct: 482 SHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKI 541
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
WD + + L L GH VN V F D + + SAS D T+K+W ++ T +G
Sbjct: 542 WDTATGS---LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGS 598
Query: 397 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 446
R L + L+ S D T+++WD+E + + E+ R I+FD
Sbjct: 599 GRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHEIQR-IQFD 649
Score = 298 (110.0 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 67/226 (29%), Positives = 118/226 (52%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGE 305
+SG++ ++V+ L GH +V + +D R++ S S D TV++WD T
Sbjct: 237 ISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSF 296
Query: 306 MVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ NTL H E V + FS+ ++ + S D ++ +WD + TL+R+L GH +V V
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATG---TLQRMLKGHNDSVRSV 353
Query: 364 DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 419
F D + I S S DRT+++W T++ T H+ + + + R + S S +
Sbjct: 354 VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNV 413
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
++WD G+ VLEGH++ V + F D++ + S + D +K+W+
Sbjct: 414 KIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH 459
Score = 214 (80.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 355 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV 410
GH AV V F D + + SASGD T+K+W+T++ TL GH + + + RL+
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468
S S D T+++WD G R+L+GH + VR + F D++ I SG+ D +++W L
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Score = 44 (20.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
Y + DD K+V TI W L + ++ ++ +Q ER I SSD
Sbjct: 168 YRIDPDDGKLVGSFLRRTILYW----LGALGLIQETASALSSMQRLERFIRKRSSD 219
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 323 (118.8 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 96/311 (30%), Positives = 153/311 (49%)
Query: 170 YRDEFQIVSSSHDDTILIWDFLNYSE--TPIQXXXXXXXXXXXXXIENNWRM--GKFLLQ 225
YR+ F++ S+ I +F + + +Q W + GK L++
Sbjct: 278 YRERFKVESNWRKGHCRIQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGK-LIR 336
Query: 226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
R+ S +S GV L +DD K+++G D TI+VW+ ++ +CI GH+ SVL + ++
Sbjct: 337 RL---SGHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQK 393
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVS 343
VI+SGS+D TV+VW V + TL H E V + L + +CS D +I +WD +
Sbjct: 394 VIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWD-IR 451
Query: 344 PNEITLRRVLVGHRAAVN-VVDFDEKYIVSASGDRTIKVWN-------TSSCEFVRTLNG 395
N +V GH V ++ K + + + D T + T + T +
Sbjct: 452 TNSCL--KVFRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSN 509
Query: 396 HKRGIAC--LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSG 453
+ + + Y L+ G DNTI+LWD++ G C+R GH E V I D RI+SG
Sbjct: 510 EQETVLDENIPYPTHLLSCGL-DNTIKLWDVKTGKCIRTQFGHVEGVWDIAADNFRIISG 568
Query: 454 AYDGKIKVWNL 464
++DG IKVW+L
Sbjct: 569 SHDGSIKVWDL 579
Score = 226 (84.6 bits), Expect = 9.2e-18, Sum P(3) = 9.2e-18
Identities = 75/298 (25%), Positives = 135/298 (45%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
F+ + + + S D TI +W+ + + +R L+GH G+ L + DR +++GS D TIR +
Sbjct: 310 FNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRKLITGSLDKTIRVWNY 369
Query: 174 F--QIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+ +S+ H D++L D +Y + + + + + + +NC
Sbjct: 370 ITGECISTYRGHSDSVLSVD--SYQKVIVSGSADKTVKVWHVESRTCYTL-RGHTEWVNC 426
Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV-----LCLQYDE 284
+ K C D D TI++WD + C+KV GH G V L ++ E
Sbjct: 427 VKLHPKSFSCFSCSD--------DTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVE 478
Query: 285 RVIISGSSDSTVRVWD---VNTGEMVNTLIHHCEAVL--HLRFSNGMMVTCSKDRSIAVW 339
+ +SD + D + + +T + E VL ++ + ++ +C D +I +W
Sbjct: 479 NLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTHLL-SCGLDNTIKLW 537
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + I R GH V + D I+S S D +IKVW+ S + + T NG +
Sbjct: 538 DVKTGKCI---RTQFGHVEGVWDIAADNFRIISGSHDGSIKVWDLQSGKCMHTFNGRR 592
Score = 175 (66.7 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
W C ++ GH G+ LQ+ RL+ +GS D+TI +WD+ G +R L GH + V+
Sbjct: 288 WRKGHCR-IQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVK 346
Query: 442 CIRFDAKRIVSGAYDGKIKVWNLV 465
+ FD +++++G+ D I+VWN +
Sbjct: 347 TLYFDDRKLITGSLDKTIRVWNYI 370
Score = 126 (49.4 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
+++S D TIK+W+ + + +RT GH G+ + + ++SGS D +I++WD++ G
Sbjct: 524 HLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAADNFRIISGSHDGSIKVWDLQSGK 583
Query: 429 CLRVLEG 435
C+ G
Sbjct: 584 CMHTFNG 590
Score = 78 (32.5 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 131 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF--QIVS--SSHDDTI 185
W C ++ GH G+ LQ+ RL+ +GS D+TI D F +++ S H D +
Sbjct: 288 WRKGHCR-IQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGV 345
Score = 61 (26.5 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 80 VENLLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
++ +LS C Q +I++ + M++ DFIS+LP
Sbjct: 156 LDGILSTSCFPQLSYISSLVTHMIKIDFISILP 188
Score = 42 (19.8 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 29 ISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKY 67
+++++ SP P D + +P P++ K C+++
Sbjct: 61 MTMATRSPSSSPDLATNDSGTRVQPLPEYNFTK-FCYRH 98
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 345 (126.5 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 77/235 (32%), Positives = 128/235 (54%)
Query: 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVW 299
+D + S D T+K+WD + L GH+ V + +D R++ S +SDSTV++W
Sbjct: 306 HDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLAS-ASDSTVKIW 364
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D TG + +TL H + V + FS+ ++ + S D ++ +WD + + L+ L GHR
Sbjct: 365 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS---LQHTLEGHR 421
Query: 358 AAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSG 413
V V F D + + SAS D T+K+W+T + TL GH+ + + + RL+ S
Sbjct: 422 DWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASA 481
Query: 414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
S D T+R+WD E G+ LEGH LV + F D++ + S + D +++W++ A
Sbjct: 482 SDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEA 536
Score = 232 (86.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 71/274 (25%), Positives = 120/274 (43%)
Query: 134 SSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILI 187
S C ++ L GH+ + + Y RL+ S S D T++ D Q H D +
Sbjct: 286 SPC--LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRS 343
Query: 188 WDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR-INCRSENSKGVYCLQYDDHK 246
F + S I W G LQ + + + V +D
Sbjct: 344 VIFSHDSRL------LASASDSTVKI---WDTGTGSLQHTLEGHRDWVRSVI-FSHDSQL 393
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTG 304
+ S D+T+K+WD + L GH V + +D +++ S S DSTV++WD TG
Sbjct: 394 LASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG 453
Query: 305 EMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ +TL H + V + FS+ ++ + S DR++ +WD + + L GH + V
Sbjct: 454 SLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSH---KHTLEGHSSLVTS 510
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
V F D + + SAS D+T+++W+ + T +
Sbjct: 511 VSFSHDSRLLASASNDQTVRIWDIEARSLQHTFD 544
Score = 166 (63.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 52/210 (24%), Positives = 91/210 (43%)
Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDN 166
S++ + D + + SAS D T+K+W+T + TL GH+ + + + +L+ S S D+
Sbjct: 343 SVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 167 TIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKF 222
T++ D Q H D + F + S+ I W G
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQL-----LASASDDSTVKI---WDTGTG 453
Query: 223 LLQR-INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
LQ + + + V +D + S D T+++WD L GH+ V +
Sbjct: 454 SLQHTLEGHRDWVRSVI-FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 282 Y--DERVIISGSSDSTVRVWDVNTGEMVNT 309
+ D R++ S S+D TVR+WD+ + +T
Sbjct: 513 FSHDSRLLASASNDQTVRIWDIEARSLQHT 542
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 385 SSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 442
S C ++ L GH+ + + Y RL+ S S D T+++WD E G+ LEGH +LVR
Sbjct: 286 SPC--LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRS 343
Query: 443 IRFDA-KRIVSGAYDGKIKVWN 463
+ F R+++ A D +K+W+
Sbjct: 344 VIFSHDSRLLASASDSTVKIWD 365
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 316 (116.3 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 74/235 (31%), Positives = 125/235 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D +VSG D T+KVW+ + + +K L GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V TG+ + TL H + V +H ++V+ S D +WD S L+ ++
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 242
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
V+ V F KYI++A+ D T+K+W+ S + ++T GHK C+ + +V
Sbjct: 243 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 302
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
SGS DN + +W+++ ++ L+GH + V C + I++ A D IK+W
Sbjct: 303 SGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 290 (107.1 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 73/248 (29%), Positives = 133/248 (53%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHT-G-SVLCLQYDERVII 288
++K V +++ + + S D IK+W + K ++GH G S + D R+++
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNE 346
SGS D T++VW+++TG+ + TL H V F+ + ++V+ S D S+ +WD+ +
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 190
Query: 347 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACL 403
+ + L H V+ V F D IVS+S D ++W+T+S + ++TL + ++ +
Sbjct: 191 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 404 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYD 456
++ + +++ + DNT++LWD G CL+ GH+ CI F K IVSG+ D
Sbjct: 248 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 307
Query: 457 GKIKVWNL 464
+ +WNL
Sbjct: 308 NMVYIWNL 315
Score = 264 (98.0 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 55/163 (33%), Positives = 91/163 (55%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
TL H +AV ++FS NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 123
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
D + +VS S D+T+KVW S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
D+ G CL+ L H + V + F D IVS +YDG ++W+
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 243 (90.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 48/129 (37%), Positives = 80/129 (62%)
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
V PN TL+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK G
Sbjct: 58 VKPN-YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 116
Query: 400 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY 455
I+ + + RL+VSGS D T+++W++ G L+ L+GH V C F+ + IVSG++
Sbjct: 117 ISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSF 176
Query: 456 DGKIKVWNL 464
D +++W++
Sbjct: 177 DESVRIWDV 185
Score = 212 (79.7 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 78/299 (26%), Positives = 134/299 (44%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+ PN + ++ S+S D+ IK+W +F +T++GHK GI+ + + RL+VSGS D
Sbjct: 78 VKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD 135
Query: 166 NTIRYRDEFQIVS----SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RM 219
T++ + S H + + +F P I W R
Sbjct: 136 KTLKVWELSTGKSLKTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESVRI---WDVRT 187
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG---S 276
GK L+ + S+ V+ D IVS D ++WD S QC+K L S
Sbjct: 188 GK-CLKTLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 245
Query: 277 VLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA--VLHLRFS--NGM-MVTCS 331
+ + + I++ + D+T+++WD + G+ + T H + FS G +V+ S
Sbjct: 246 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 305
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAV--NVVDFDEKYIVSAS--GDRTIKVWNTSS 386
+D + +W++ S E+ + L GH V E I SA+ D+TIK+W + +
Sbjct: 306 EDNMVYIWNLQS-KEVVQK--LQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 278 (102.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 79/260 (30%), Positives = 122/260 (46%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I NW GK + + + CLQ+D+ KI++G D I V+D + + + L G
Sbjct: 633 IRQNWTSGKVKPGHVAFAAHPRHVITCLQFDEDKIITGSDDQLIHVYDTNTGKLRQKLEG 692
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMV-TCS 331
H G V LQY+ ++SGS+D +VRVWD+ G H V L+ V + +
Sbjct: 693 HEGGVWALQYEGNTLVSGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDT 752
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHR-AAVNVVDFDEKYIVSASGDRTIKVW---NTSSC 387
+ R I M P + ++ G R + + V E A R I+ N + C
Sbjct: 753 EGRPI----MSPPKPL----IITGSRDSQLRVWRLPE-----AGSRRYIQTGPPANDAEC 799
Query: 388 E-FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 446
F+R L GH + + +VSGS D ++R+W I G L L+GH + V + D
Sbjct: 800 PYFLRILQGHTHSVRAISAHADTLVSGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVLD 859
Query: 447 AKR--IVSGAYDGKIKVWNL 464
KR +SG+ D +K+W+L
Sbjct: 860 HKRNRCISGSMDSLVKIWDL 879
Score = 270 (100.1 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 69/232 (29%), Positives = 116/232 (50%)
Query: 247 IVSGLRDNTIKVW------DRVSLQ---------C---IKVLTGHTGSVLCLQYDERVII 288
I++G RD+ ++VW R +Q C +++L GHT SV + ++
Sbjct: 765 IITGSRDSQLRVWRLPEAGSRRYIQTGPPANDAECPYFLRILQGHTHSVRAISAHADTLV 824
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH--LRFSNGMMVTCSKDRSIAVWDMVSPNE 346
SGS D +VRVW ++TGE ++ L H + V L ++ S D + +WD+ +
Sbjct: 825 SGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETG-- 882
Query: 347 ITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
L GH V ++D ++ +VSA+ D T+++W+ + + L H I C Q+
Sbjct: 883 -ACLYTLEGHSLLVGLLDLRDERLVSAAADSTLRIWDPENGKCKSILTAHTAAITCFQHD 941
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAY-DG 457
R V+SGS + T+++WDI G C+ L V ++FD +R V+ DG
Sbjct: 942 SRKVISGS-EKTVKMWDIATGECIEDLLTDLSGVWQVKFDGRRCVAAVQRDG 992
Score = 208 (78.3 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 45/154 (29%), Positives = 81/154 (52%)
Query: 313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--I 370
H +V + +V+ S D S+ VW + + ++ L GH V V D K
Sbjct: 809 HTHSVRAISAHADTLVSGSYDCSVRVWRISTGEQL---HWLQGHSQKVYSVVLDHKRNRC 865
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 430
+S S D +K+W+ + + TL GH + L RD +VS ++D+T+R+WD E G C
Sbjct: 866 ISGSMDSLVKIWDLETGACLYTLEGHSLLVGLLDLRDERLVSAAADSTLRIWDPENGKCK 925
Query: 431 RVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+L H + C + D+++++SG+ + +K+W++
Sbjct: 926 SILTAHTAAITCFQHDSRKVISGS-EKTVKMWDI 958
Score = 201 (75.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 57/208 (27%), Positives = 106/208 (50%)
Query: 247 IVSGLRDNTIKVWDRVSL-QCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNT 303
+VSG D +++VW R+S + + L GH+ V + L + ISGS DS V++WD+ T
Sbjct: 823 LVSGSYDCSVRVW-RISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLET 881
Query: 304 GEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
G + TL H V L + +V+ + D ++ +WD P + +L H AA+
Sbjct: 882 GACLYTLEGHSLLVGLLDLRDERLVSAAADSTLRIWD---PENGKCKSILTAHTAAITCF 938
Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG-SSDNTIRLW 422
D + ++S S ++T+K+W+ ++ E + L G+ +++ R V+ D +
Sbjct: 939 QHDSRKVISGS-EKTVKMWDIATGECIEDLLTDLSGVWQVKFDGRRCVAAVQRDGLTYIE 997
Query: 423 DIECGACLRVLEGHEELVRCIRFDAKRI 450
++ GA +R + EEL + I ++ +
Sbjct: 998 ILDFGA-VRDGKPREELGKRIVLNSSEV 1024
Score = 155 (59.6 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 43/160 (26%), Positives = 85/160 (53%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
WR+ ++++ +S+ VY + D ++ +SG D+ +K+WD + C+ L GH+
Sbjct: 835 WRISTG--EQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEGHS 892
Query: 275 GSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKD 333
V L DER ++S ++DST+R+WD G+ + L H A+ + + +++ S +
Sbjct: 893 LLVGLLDLRDER-LVSAAADSTLRIWDPENGKCKSILTAHTAAITCFQHDSRKVISGS-E 950
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSA 373
+++ +WD+ + I L+ + V V FD + V+A
Sbjct: 951 KTVKMWDIATGECI---EDLLTDLSGVWQVKFDGRRCVAA 987
Score = 132 (51.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 396 HKRG-IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA 454
H R I CLQ+ + +++GS D I ++D G + LEGHE V ++++ +VSG+
Sbjct: 652 HPRHVITCLQFDEDKIITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWALQYEGNTLVSGS 711
Query: 455 YDGKIKVWNLVAALDPRA---PTTTL-CLRTLV 483
D ++VW++ L + T+T+ CL+ L+
Sbjct: 712 TDRSVRVWDIEKGLCTQVFYGHTSTVRCLQILM 744
Score = 122 (48.0 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 93 GHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 152
GH+ P R I+ L FDE I++ S D+ I V++T++ + + L GH+ G+ L
Sbjct: 645 GHVAFAAHP---RHVITCL-QFDEDKIITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWAL 700
Query: 153 QYRDRLVVSGSSDNTIRYRD 172
QY +VSGS+D ++R D
Sbjct: 701 QYEGNTLVSGSTDRSVRVWD 720
Score = 77 (32.2 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRD 172
++ +VS S DR+++VW+ + GH + CLQ V S + I
Sbjct: 702 YEGNTLVSGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPP 761
Query: 173 EFQIVSSSHDDTILIW 188
+ I++ S D + +W
Sbjct: 762 KPLIITGSRDSQLRVW 777
Score = 59 (25.8 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 132 NTSSCE-FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
N + C F+R L GH + + +VSGS D ++R
Sbjct: 795 NDAECPYFLRILQGHTHSVRAISAHADTLVSGSYDCSVR 833
Score = 38 (18.4 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 84 LSRMCHYQHGH-INTYLKPMLQRDFISLLP 112
L R C + H + + P L+ DFI LP
Sbjct: 421 LLRRCPRKTLHMVADVVNPALKCDFIKQLP 450
Score = 38 (18.4 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 176 IVSSSHDDTILIWD 189
+VS S D ++ +WD
Sbjct: 707 LVSGSTDRSVRVWD 720
Score = 37 (18.1 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 172 DEFQIVSSSHDDTILIWD 189
DE +I++ S D I ++D
Sbjct: 663 DEDKIITGSDDQLIHVYD 680
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 331 (121.6 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 77/254 (30%), Positives = 134/254 (52%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS--LQCIKVL 270
+ +NW+ L +N ++ + + C + + I + DNTIKV S +CI+ L
Sbjct: 898 VNDNWKC----LYTVNGHRKSIESIAC---NSNYIFTSSPDNTIKVHIIRSGNTKCIETL 950
Query: 271 TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFSNGMMVT 329
GHTG V C+ +E+ + S S D T++VWD++T + + + H + + L S + +
Sbjct: 951 VGHTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFS 1010
Query: 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF 389
D+ I VWD + +++ + GH V + Y+ S S D IK+W+ S+
Sbjct: 1011 GGNDQIIYVWDTET---LSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSC 1067
Query: 390 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRFDAK 448
+ TL GH ++ +DR + SGS DN+I++WD++ C+ + + H V+C+
Sbjct: 1068 IDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNN 1127
Query: 449 RIVSGAYDGKIKVW 462
+I+S A+DG IKVW
Sbjct: 1128 QIISAAFDGSIKVW 1141
Score = 274 (101.5 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 64/229 (27%), Positives = 119/229 (51%)
Query: 242 YDDHKIV-SGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVW 299
+D+ K++ +G D T +V+D + +C+ + GH S+ + + I + S D+T++V
Sbjct: 878 FDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACNSNYIFTSSPDNTIKVH 937
Query: 300 DVNTG--EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG-H 356
+ +G + + TL+ H V + + + +CS D++I VWD+ + EI + G H
Sbjct: 938 IIRSGNTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEI---KSFEGVH 994
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 416
+ + +Y+ S D+ I VW+T + + + GH+ + L + S S D
Sbjct: 995 TKYIKTLALSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKD 1054
Query: 417 NTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNL 464
N I++WD+ +C+ L+GH V C+ D + + SG+ D IKVW+L
Sbjct: 1055 NVIKIWDLSNFSCIDTLKGHWNSVSSCVVKD-RYLYSGSEDNSIKVWDL 1102
Score = 249 (92.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 58/189 (30%), Positives = 96/189 (50%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYDERVIISGSSDST 295
V C+ ++ + S D TIKVWD + + IK G HT + L R + SG +D
Sbjct: 957 VNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQI 1016
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+ VWD T M+ + H + VL L + + + SKD I +WD+ + + L G
Sbjct: 1017 IYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDL---SNFSCIDTLKG 1073
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGS 414
H +V+ ++Y+ S S D +IKVW+ + E V T+ H G+ CL + ++S +
Sbjct: 1074 HWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQIISAA 1133
Query: 415 SDNTIRLWD 423
D +I++W+
Sbjct: 1134 FDGSIKVWE 1142
Score = 202 (76.2 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 67/286 (23%), Positives = 126/286 (44%)
Query: 105 RDFISLLPNFD-EKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACLQYRDRLVVSG 162
R+ ++ + FD +K + + GD T +V++ + + + + T+NGH++ I + + +
Sbjct: 869 RERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACNSNYIFTS 928
Query: 163 SSDNTIRYRDEFQIVSSSHDDTI-LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
S DNTI+ I+ S + I + + I+ W +
Sbjct: 929 SPDNTIKVH----IIRSGNTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKV-WDLST 983
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
F + + ++K + L + SG D I VWD +L + + GH VL L
Sbjct: 984 FKEIK-SFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLH 1042
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM 341
+ S S D+ +++WD++ ++TL H +V + + + S+D SI VWD+
Sbjct: 1043 CTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDL 1102
Query: 342 VSPNEI-TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS 386
+ + T+ + H V + I+SA+ D +IKVW S
Sbjct: 1103 DTLECVYTIPK---SHSLGVKCLMVFNNQIISAAFDGSIKVWEWQS 1145
Score = 83 (34.3 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 37/158 (23%), Positives = 65/158 (41%)
Query: 28 TISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQ-DQIDFVENLLSR 86
T+ + P+L P K+ P +F+ + C + E+ + I F +N
Sbjct: 825 TMVMPDILPELMPSDNTIKVGAKQLPKAEFSKKDLKCVSTIQSFRERVNSIAFFDNQKLL 884
Query: 87 MCHYQHG-----HINTYLKPML-----QRDFISLLPNFDEKYIVSASGDRTIKVW--NTS 134
Y G +N K + ++ S+ N YI ++S D TIKV +
Sbjct: 885 CAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACN--SNYIFTSSPDNTIKVHIIRSG 942
Query: 135 SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ + + TL GH + C+ ++ + S S D TI+ D
Sbjct: 943 NTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVWD 980
Score = 40 (19.1 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 14/73 (19%), Positives = 32/73 (43%)
Query: 39 PPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQD---QIDFVENLLSRMCHYQHGHI 95
PP+ ++ ++ E Q + + K + K +EQ ++ F + + +C G+
Sbjct: 618 PPIEMISPISKNNEAMTQLKNGTKFVLKLYKKEAEQQASRELYFEDVKMQMVCR-DWGNK 676
Query: 96 NTYLKPMLQRDFI 108
KP + +F+
Sbjct: 677 FNQKKPPKKIEFL 689
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 289 (106.8 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 72/226 (31%), Positives = 120/226 (53%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
D T+K+W+ L C + LTGH V D + I++ S D T+++++V T +M TL
Sbjct: 100 DKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTL 159
Query: 311 IHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D 366
H V F+ + ++V+ S D S+ +WD+ + + + L H V+ V F D
Sbjct: 160 KGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV---KTLPAHSDPVSAVSFNRD 216
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
I S S D +++W+T++ + V+TL + +A +++ + ++S + DNT++LWD
Sbjct: 217 GSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Query: 424 IECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
G L+ +GHE CI F K I+SG+ D KI VWNL
Sbjct: 277 FGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNL 322
Score = 281 (104.0 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 56/169 (33%), Positives = 101/169 (59%)
Query: 305 EMVNTLIHHCEAVLHLRFSN-GMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
++++T+ H +++ ++FS G + T S D+++ +W+M ++++ R L GH+ VN
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNM---SDLSCERTLTGHKLGVN- 125
Query: 363 VDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSD 416
DF D K IV+AS D+T+K++ + + +TL GH + C + + LVVSGS D
Sbjct: 126 -DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFD 184
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
++R+WD+ G C++ L H + V + F D I SG+YDG +++W+
Sbjct: 185 ESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 279 (103.3 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 74/263 (28%), Positives = 129/263 (49%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS 276
W M +R + + D IV+ D T+K+++ +++ K L GHT
Sbjct: 106 WNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNY 165
Query: 277 VLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTC-SK 332
V C ++ + +++SGS D +VR+WDV TG V TL H + V + F+ +G ++T S
Sbjct: 166 VFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSY 225
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFV 390
D + +WD + N ++ ++ V V F KYI+S++ D T+K+W+ + +
Sbjct: 226 DGLVRIWD--TANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTL 283
Query: 391 RTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445
+ GH+ C+ + ++SGS D I +W+++ ++ LEGH + V I
Sbjct: 284 KQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAV--IAS 341
Query: 446 DA----KRIVSGAY--DGKIKVW 462
D I SGA D I++W
Sbjct: 342 DCHPMQNMIASGALEPDNTIRIW 364
Score = 220 (82.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 56/208 (26%), Positives = 110/208 (52%)
Query: 267 IKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
I + GHT S+ +++ + + + S+D TV++W+++ TL H V +S
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 324 -NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIK 380
+ +VT S D+++ ++++ P + + + L GH V +F+ + +VS S D +++
Sbjct: 132 DSKSIVTASDDKTLKIYEV--PT-VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438
+W+ + V+TL H ++ + + RD L+ SGS D +R+WD G C++ L E
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDEN 248
Query: 439 L-VRCIRF--DAKRIVSGAYDGKIKVWN 463
V ++F + K I+S D +K+W+
Sbjct: 249 PPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 141 (54.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 54/200 (27%), Positives = 89/200 (44%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N +VS S D ++++W+ + V+TL H ++ + + RD L+ SGS D +R
Sbjct: 172 NPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRI 231
Query: 171 RDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D Q V + DD F+ +S P + W GK +
Sbjct: 232 WDTANGQCVKTLVDDENPPVAFVKFS--PNGKYILSSNLDNTLKL---WDFGKGKTLKQY 286
Query: 229 CRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
EN+K YC+ K I+SG D I VW+ + + ++ L GHT +V+
Sbjct: 287 QGHENNK--YCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCH 344
Query: 284 --ERVIISGS--SDSTVRVW 299
+ +I SG+ D+T+R+W
Sbjct: 345 PMQNMIASGALEPDNTIRIW 364
Score = 137 (53.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQYDE--RVIISGSSDSTVRVW 299
D I SG D +++WD + QC+K L V +++ + I+S + D+T+++W
Sbjct: 216 DGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN-----GM-MVTCSKDRSIAVWDMVSPNEITLRRVL 353
D G+ + H E + F+N G +++ S+D I VW++ + E+ + L
Sbjct: 276 DFGKGKTLKQYQGH-ENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQT-KEVV--QSL 331
Query: 354 VGHRAAVNVVDFDEKYIVSASG----DRTIKVWNTSS 386
GH AV D + ASG D TI++W + S
Sbjct: 332 EGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRSDS 368
Score = 113 (44.8 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRD 172
D K IV+AS D+T+K++ + + +TL GH + C + + LVVSGS D ++R D
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD 191
Score = 104 (41.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 117 KYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
K++ ++S D+T+K+WN S SCE RTL GHK G+ + + +V+ S D T++
Sbjct: 92 KFLGTSSADKTVKIWNMSDLSCE--RTLTGHKLGVNDFAWSADSKSIVTASDDKTLK 146
Score = 37 (18.1 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 30 SVSSASPQLPPMT 42
++SS SP PP+T
Sbjct: 36 ALSSVSPANPPIT 48
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 280 (103.6 bits), Expect = 8.1e-27, Sum P(2) = 8.1e-27
Identities = 77/234 (32%), Positives = 119/234 (50%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVW 299
IVS RD +I +W D+ + LTGH+ V + L D + +SGS D +R+W
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D+ G + H + VL + FS N +V+ S+DR+I +W+ + + T+ GHR
Sbjct: 91 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHR 150
Query: 358 AAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVV 411
V+ V F + IVSAS D+T+KVWN S+C+ TL GH ++ + L
Sbjct: 151 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA 210
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNL 464
SG D + LWD+ G L LE + ++ + F R + A + IK+W+L
Sbjct: 211 SGGKDGVVLLWDLAEGKKLYSLEANS-VIHALCFSPNRYWLCAATEHGIKIWDL 263
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/153 (30%), Positives = 81/153 (52%)
Query: 326 MMVTCSKDRSIAVWDMVSPNEI--TLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
++V+ S+D+SI +W + ++ +R L GH V V+ D ++ +S S D +++
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL----EG 435
W+ ++ R GH + + + + +R +VS S D TI+LW+ G C + EG
Sbjct: 90 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGECKYTISEGGEG 148
Query: 436 HEELVRCIRFDAKR----IVSGAYDGKIKVWNL 464
H + V C+RF IVS ++D +KVWNL
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Score = 169 (64.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/198 (26%), Positives = 97/198 (48%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
L D +SG D +++WD + + GHT VL + + D R I+S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 298 VWDVNTGEMVNTLIH----HCEAVLHLRFS-NGM---MVTCSKDRSIAVWDMVSPNEITL 349
+W+ GE T+ H + V +RFS N + +V+ S D+++ VW++ + L
Sbjct: 131 LWNT-LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL---SNCKL 186
Query: 350 RRVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
R L GH V+ V + ASG D + +W+ + + + +L + A +
Sbjct: 187 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 246
Query: 408 RLVVSGSSDNTIRLWDIE 425
R + ++++ I++WD+E
Sbjct: 247 RYWLCAATEHGIKIWDLE 264
Score = 146 (56.5 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 43/162 (26%), Positives = 79/162 (48%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT----GHTGSVLCLQYD----ERVIISGSSDS 294
D+ +IVS RD TIK+W+ + +C ++ GH V C+++ + I+S S D
Sbjct: 116 DNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEI-TLRR 351
TV+VW+++ ++ +TL H V + S + + KD + +WD+ ++ +L
Sbjct: 175 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 234
Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
V H + +Y + A+ + IK+W+ S V L
Sbjct: 235 NSVIHALCFS----PNRYWLCAATEHGIKIWDLESKSIVEDL 272
Score = 141 (54.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 63/247 (25%), Positives = 104/247 (42%)
Query: 119 IVSASGDRTIKVWNTSSCEFV-----RTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRYR 171
IVSAS D++I +W + + R L GH + L + +SGS D +R
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR- 230
D VS+ F+ +++ + + R K C+
Sbjct: 91 DLAAGVSTRR--------FVGHTKDVLSVAFSLDNRQIVSASRD--RTIKLWNTLGECKY 140
Query: 231 --SENSKG----VYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVL 278
SE +G V C+++ + IVS D T+KVW+ + + L GHTG S +
Sbjct: 141 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTV 200
Query: 279 CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-LRFS-NGMMVTCSKDRSI 336
+ D + SG D V +WD+ G+ + +L +V+H L FS N + + + I
Sbjct: 201 AVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--EANSVIHALCFSPNRYWLCAATEHGI 258
Query: 337 AVWDMVS 343
+WD+ S
Sbjct: 259 KIWDLES 265
Score = 119 (46.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNT-SSCEFVRTLNG--HKRGIACLQYRDRLVVS 161
+D +S+ + D + IVSAS DRTIK+WNT C++ + G H+ ++C+++
Sbjct: 106 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRF------- 158
Query: 162 GSSDNTIRYRDEFQIVSSSHDDTILIWDFLN 192
S NT++ IVS+S D T+ +W+ N
Sbjct: 159 --SPNTLQPT----IVSASWDKTVKVWNLSN 183
Score = 45 (20.9 bits), Expect = 8.1e-27, Sum P(2) = 8.1e-27
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 446 DAKRIVSGAYDGKIKVWNL 464
D + SG DG I+VW +
Sbjct: 306 DGSTLFSGYTDGVIRVWGI 324
Score = 45 (20.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 283 DERVIISGSSDSTVRVWDV 301
D + SG +D +RVW +
Sbjct: 306 DGSTLFSGYTDGVIRVWGI 324
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 235 KGVYC--LQY--DDHKIVSGLRDNTIKVW 259
K +YC L + D + SG D I+VW
Sbjct: 294 KVIYCTSLNWSADGSTLFSGYTDGVIRVW 322
Score = 39 (18.8 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 412 SGSSDNTIRLWDI 424
SG +D IR+W I
Sbjct: 312 SGYTDGVIRVWGI 324
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 246 (91.7 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 67/253 (26%), Positives = 120/253 (47%)
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENS 234
QI+S S D T+ +W+ I+ +++N F + + +
Sbjct: 327 QIISGSSDSTVKVWNIAEIINDSIEIPDTEEEEEEA--LQDNVMNDPFAV------NNSF 378
Query: 235 KGVYCLQYDDH---KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS 291
+ + DH IVS + D T + +L H V CLQ +++SG
Sbjct: 379 TSLPDINEPDHVHTNIVS-VNDKTSTRYRNHNLSSTHTFK-HQSCVTCLQVYGNILMSGG 436
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE--ITL 349
SD VRVWD+NT + + L H E + L+F+ ++VT S D ++ VWD+ S N TL
Sbjct: 437 SDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNVLVTGSDDTTVRVWDLRSKNSNISTL 496
Query: 350 RRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACLQYRDR 408
R GH +V + +D +++ S D++++ WN + + + L I+CLQ+ +
Sbjct: 497 R----GHNGSVRCLQWDGTTLITGSNDQSVRWWNLNYDSDQSKELFSFNSSISCLQFTNS 552
Query: 409 LVVSGSSDNTIRL 421
+++ G SD+ +++
Sbjct: 553 ILMCGLSDSKVQI 565
Score = 209 (78.6 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 34/110 (30%), Positives = 66/110 (60%)
Query: 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 415
H++ V + ++S DR ++VW+ ++ + ++ L+GH GI LQ+ ++V+GS
Sbjct: 418 HQSCVTCLQVYGNILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNVLVTGSD 477
Query: 416 DNTIRLWDIEC-GACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
D T+R+WD+ + + L GH VRC+++D +++G+ D ++ WNL
Sbjct: 478 DTTVRVWDLRSKNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSVRWWNL 527
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 43/121 (35%), Positives = 69/121 (57%)
Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLV 410
L+GH V + D++ + + S D+T KVW+T + C F TL GH I CL + ++
Sbjct: 229 LIGHTGTVWALHLDDERVYTGSFDKTAKVWDTKTKKCRF--TLAGHYYPIQCLDVNNNIM 286
Query: 411 VSGSSDNTIRLWDIECGACLRVL--EGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAAL 468
+GS DN+IR+WD+E G +L H V C++ +I+SG+ D +KVWN+ +
Sbjct: 287 ATGSLDNSIRIWDLEKGKSKGILTTRAHNFDVFCLQQIGDQIISGSSDSTVKVWNIAEII 346
Query: 469 D 469
+
Sbjct: 347 N 347
Score = 190 (71.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 43/177 (24%), Positives = 88/177 (49%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE 346
I+S + ++ R + N +T H V L+ ++++ DR + VWD+ +
Sbjct: 394 IVSVNDKTSTRYRNHNLSS-THTFKHQ-SCVTCLQVYGNILMSGGSDRVVRVWDLNTSQP 451
Query: 347 ITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQY 405
I ++L GH + + F+ +V+ S D T++VW+ S + TL GH + CLQ+
Sbjct: 452 I---QILSGHNEGIRALQFNGNVLVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRCLQW 508
Query: 406 RDRLVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFDAKRIVSGAYDGKIKV 461
+++GS+D ++R W++ + + L + C++F ++ G D K+++
Sbjct: 509 DGTTLITGSNDQSVRWWNLNYDSDQSKELFSFNSSISCLQFTNSILMCGLSDSKVQI 565
Score = 179 (68.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 51/204 (25%), Positives = 99/204 (48%)
Query: 120 VSASG--DRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ 175
+ A+G D +I++W+ + + T H + CLQ ++SGSSD+T++ + +
Sbjct: 285 IMATGSLDNSIRIWDLEKGKSKGILTTRAHNFDVFCLQQIGDQIISGSSDSTVKVWNIAE 344
Query: 176 IVSSSHD-------------DTILIWDF-LNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
I++ S + D ++ F +N S T + N+ +
Sbjct: 345 IINDSIEIPDTEEEEEEALQDNVMNDPFAVNNSFTSLPDINEPDHVHTNIVSVNDKTSTR 404
Query: 222 FLLQRINCRS--ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC 279
+ ++ ++ V CLQ + ++SG D ++VWD + Q I++L+GH +
Sbjct: 405 YRNHNLSSTHTFKHQSCVTCLQVYGNILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRA 464
Query: 280 LQYDERVIISGSSDSTVRVWDVNT 303
LQ++ V+++GS D+TVRVWD+ +
Sbjct: 465 LQFNGNVLVTGSDDTTVRVWDLRS 488
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 270 LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVT 329
L GHTG+V L D+ + +GS D T +VWD T + TL H + L +N +M T
Sbjct: 229 LIGHTGTVWALHLDDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNIMAT 288
Query: 330 CSKDRSIAVWDMV---SPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
S D SI +WD+ S +T R H V + I+S S D T+KVWN
Sbjct: 289 GSLDNSIRIWDLEKGKSKGILTTR----AHNFDVFCLQQIGDQIISGSSDSTVKVWN 341
Score = 166 (63.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 32/108 (29%), Positives = 61/108 (56%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V+ L DD ++ +G D T KVWD + +C L GH + CL + ++ +GS D+++
Sbjct: 236 VWALHLDDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNIMATGSLDNSI 295
Query: 297 RVWDVNTGE---MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM 341
R+WD+ G+ ++ T H+ + V L+ +++ S D ++ VW++
Sbjct: 296 RIWDLEKGKSKGILTTRAHNFD-VFCLQQIGDQIISGSSDSTVKVWNI 342
Score = 158 (60.7 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 31/105 (29%), Positives = 57/105 (54%)
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 419
+N D IVS + D+T + + T H+ + CLQ +++SG SD +
Sbjct: 384 INEPDHVHTNIVSVN-DKTSTRYRNHNLSSTHTFK-HQSCVTCLQVYGNILMSGGSDRVV 441
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
R+WD+ +++L GH E +R ++F+ +V+G+ D ++VW+L
Sbjct: 442 RVWDLNTSQPIQILSGHNEGIRALQFNGNVLVTGSDDTTVRVWDL 486
Score = 125 (49.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178
++S DR ++VW+ ++ + ++ L+GH GI LQ+ ++V+GS D T+R D
Sbjct: 432 LMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNVLVTGSDDTTVRVWD-----L 486
Query: 179 SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVY 238
S + I N S +Q W + Q S NS +
Sbjct: 487 RSKNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSVRWWNLNYDSDQSKELFSFNSS-IS 545
Query: 239 CLQYDDHKIVSGLRDNTIKV 258
CLQ+ + ++ GL D+ +++
Sbjct: 546 CLQFTNSILMCGLSDSKVQI 565
Score = 111 (44.1 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY 170
+ D++ + + S D+T KVW+T + C F TL GH I CL + ++ +GS DN+IR
Sbjct: 240 HLDDERVYTGSFDKTAKVWDTKTKKCRF--TLAGHYYPIQCLDVNNNIMATGSLDNSIRI 297
Query: 171 RD 172
D
Sbjct: 298 WD 299
Score = 83 (34.3 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 172 DEFQIVSSSHDDTILIWD-------F-LNYSETPIQXXXXXXXXXXXXXIENN---WRMG 220
D+ ++ + S D T +WD F L PIQ ++N+ W +
Sbjct: 242 DDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNIMATGSLDNSIRIWDLE 301
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
K + I ++ V+CLQ +I+SG D+T+KVW+
Sbjct: 302 KGKSKGILTTRAHNFDVFCLQQIGDQIISGSSDSTVKVWN 341
Score = 54 (24.1 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 119 IVSASGDRTIKVWN 132
I+S S D T+KVWN
Sbjct: 328 IISGSSDSTVKVWN 341
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 311 (114.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 60/186 (32%), Positives = 106/186 (56%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
+ NW+ G+ ++ ++ GV CLQ++D+ + +G D TIK+WD + + ++ L G
Sbjct: 331 VGTNWKYGRCSIKTFK---GHTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTLRG 387
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
H + CLQ+D+ +ISGS D T++VW+ TGE ++T H V+ L F ++ + S
Sbjct: 388 HESGIRCLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSV 447
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DFDEKYIVSASGDRTIKVWNTSSCEFV 390
D+++ +W+ + +LR GH VN V D + + SAS D T+++W+ + +
Sbjct: 448 DKTVKIWNFEDKSTFSLR----GHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCI 503
Query: 391 RTLNGH 396
RT +GH
Sbjct: 504 RTFHGH 509
Score = 306 (112.8 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 96/356 (26%), Positives = 154/356 (43%)
Query: 131 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTI 185
W C ++T GH G+ CLQ+ D ++ +GS D TI+ D E + + H+ I
Sbjct: 335 WKYGRCS-IKTFKGHTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTLRG-HESGI 392
Query: 186 LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH 245
L + +T + NWR G+ I+ + + GV L +D
Sbjct: 393 RC---LQFDDTKLISGSMDRTIKVW-----NWRTGEC----ISTYTGHRGGVIGLHFDAS 440
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNT 303
+ SG D T+K+W+ L GHT V ++ D R + S S D TVR+WD++T
Sbjct: 441 ILASGSVDKTVKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDT 499
Query: 304 GEMVNTLIHHCEAV-----LHLRFS-NGMMVTCSKDR-SIAVWDMVSPN---EITLRRVL 353
+ T H V L F C D S D P+ + L
Sbjct: 500 KTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNA 559
Query: 354 VGHRAAVNVVDFDE------KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
+++ FD +Y+V+++ D TI++W T++ +RT GH G+ L
Sbjct: 560 AYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADT 619
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
+VSG+ D I++WD G C R GH V CI R +G+ D ++++++
Sbjct: 620 LRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDSRFATGSEDCEVRMYS 675
Score = 255 (94.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 51/160 (31%), Positives = 89/160 (55%)
Query: 307 VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD 366
+ T H V+ L+F + ++ T S D +I +WD + E+ R L GH + + + FD
Sbjct: 342 IKTFKGHTNGVMCLQFEDNILATGSYDTTIKIWDTETGEEL---RTLRGHESGIRCLQFD 398
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426
+ ++S S DRTIKVWN + E + T GH+ G+ L + ++ SGS D T+++W+ E
Sbjct: 399 DTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNFED 458
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVWNL 464
+ L GH + V +R D ++ + S + D +++W+L
Sbjct: 459 KSTFS-LRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDL 497
Score = 150 (57.9 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 49/200 (24%), Positives = 84/200 (42%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL-------QYDERVIISGSSDSTVRVW 299
+ S D T+++WD + CI+ GH G V + +++E + D +
Sbjct: 483 VFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSG 542
Query: 300 DVNTGEMVNTL------IHHCEAVLHLRFSNGM------MVTCSKDRSIAVWDMVSPNEI 347
D + + ++ + + F NG MVT + D +I +W+ + +
Sbjct: 543 DADPPSIQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCL 602
Query: 348 TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQY 405
R GH V + D IVS + DR IK+W+ T CE RT GH + C+
Sbjct: 603 ---RTFFGHLEGVWALGADTLRIVSGAEDRMIKIWDPRTGKCE--RTFTGHSGPVTCIGL 657
Query: 406 RDRLVVSGSSDNTIRLWDIE 425
D +GS D +R++ +
Sbjct: 658 GDSRFATGSEDCEVRMYSFQ 677
Score = 146 (56.5 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
F++ + + S D TIK+W+T + E +RTL GH+ GI CLQ+ D ++SGS D TI+
Sbjct: 357 FEDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLISGSMDRTIK 412
Score = 133 (51.9 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM 306
+V+ D+TI++W+ + +C++ GH V L D I+SG+ D +++WD TG+
Sbjct: 582 MVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLRIVSGAEDRMIKIWDPRTGKC 641
Query: 307 VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS 343
T H V + + T S+D + ++ S
Sbjct: 642 ERTFTGHSGPVTCIGLGDSRFATGSEDCEVRMYSFQS 678
Score = 128 (50.1 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP 344
R +++ + DST+R+W+ TG + T H E V L +V+ ++DR I +WD P
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLRIVSGAEDRMIKIWD---P 636
Query: 345 NEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS 386
R GH V + + + S D +++++ S
Sbjct: 637 RTGKCERTFTGHSGPVTCIGLGDSRFATGSEDCEVRMYSFQS 678
Score = 126 (49.4 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR---Y 170
FD+ ++S S DRTIKVWN + E + T GH+ G+ L + ++ SGS D T++ +
Sbjct: 397 FDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNF 456
Query: 171 RDEFQIVSSSHDDTI 185
D+ H D +
Sbjct: 457 EDKSTFSLRGHTDWV 471
Score = 81 (33.6 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRY 170
+FD + S S D+T+K+WN + +L GH + ++ R V S S D T+R
Sbjct: 436 HFDASILASGSVDKTVKIWNFED-KSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRL 494
Query: 171 RD 172
D
Sbjct: 495 WD 496
Score = 61 (26.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGH 145
+ SAS D T+++W+ + +RT +GH
Sbjct: 483 VFSASDDCTVRLWDLDTKTCIRTFHGH 509
Score = 51 (23.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 8/33 (24%), Positives = 22/33 (66%)
Query: 80 VENLLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
++ ++++ C Q +I+ ++ +++ DFI+ LP
Sbjct: 153 LQGIMAQCCFPQLSYISATVRDLIRIDFITALP 185
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 313 (115.2 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 102/364 (28%), Positives = 169/364 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD--EF 174
+V+ +GD T ++W+ + + TL GH + C+ + ++ +GS DNTIR D
Sbjct: 159 MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSG 218
Query: 175 QIVSSS---HDD--TILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
Q + + H T L W+ ++ + + I W + Q
Sbjct: 219 QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKI---WDTVSRVCQYTMS 275
Query: 230 RSENSKGVYCLQYDDHKIV-SGLRDNTIKVWDRVSL-QCIKVLTGHTGSV--LCLQYDER 285
NS V C+++ ++ SG D T++VWD S +CI +L H V L L D
Sbjct: 276 GHTNS--VSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYA 333
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSP 344
+ I G+ D T + E + + E + S MMVT S D ++ +W+ +
Sbjct: 334 LRI-GAFDHTGKK-PSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKS 391
Query: 345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
+ R + GH+ VN V F D +YIVSAS D +IK+W+ +F+ T GH +
Sbjct: 392 TKPIAR--MTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQ 449
Query: 403 LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGK 458
+ + RL+VS S D T+++WD+ L GH++ V + + D KR+ SG D
Sbjct: 450 VAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKM 509
Query: 459 IKVW 462
+++W
Sbjct: 510 VRLW 513
Score = 277 (102.6 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 71/227 (31%), Positives = 116/227 (51%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT- 303
++ S +D TIK+WD VS C ++GHT SV C+++ + ++ SGS D TVRVWD+N+
Sbjct: 250 RLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQ 309
Query: 304 GEMVNTLIHHCEAVLHLRFSNGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
G +N L H V HL S + D + S E ++ L +
Sbjct: 310 GRCINILKSHAHWVNHLSLSTDYALRIGAFDHT---GKKPSTPEEAQKKALENYEKICKK 366
Query: 363 VDFDEKYIVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 419
E+ +V+AS D T+ +WN S + + + GH++ + + + R +VS S DN+I
Sbjct: 367 NGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSI 426
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
+LWD G + GH V + + D + +VS + D +KVW++
Sbjct: 427 KLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 67/257 (26%), Positives = 123/257 (47%)
Query: 237 VYCLQYDDH---KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
+ C + H ++V+G DNT ++WD + + L GH VLC+ + D VI +GS
Sbjct: 146 ILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGS 205
Query: 292 SDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRF---------SNGMMVTCSKDRSIAVWDM 341
D+T+R+WD +G+ + + H + + L + S + + SKD +I +WD
Sbjct: 206 MDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDT 265
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRG 399
VS + + GH +V+ V + + + S S DRT++VW+ +S + L H
Sbjct: 266 VSR---VCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHW 322
Query: 400 IACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGK 458
+ L D + G+ D+T + A + LE +E++ + + +V+ + D
Sbjct: 323 VNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYT 382
Query: 459 IKVWNLVAALDPRAPTT 475
+ +WN + + P A T
Sbjct: 383 MFLWNPLKSTKPIARMT 399
Score = 83 (34.3 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQYRD-RLVVSGSSDNTIRYRD 172
D + I + S D TI++W+ S + + L GH + I L + LV GS
Sbjct: 197 DGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKP------- 249
Query: 173 EFQIVSSSHDDTILIWD 189
++ SSS D TI IWD
Sbjct: 250 --RLASSSKDGTIKIWD 264
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 313 (115.2 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 97/360 (26%), Positives = 166/360 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRD--EF 174
+VS SGD T ++W+ + + TL GH + + Y ++ +GS DNT+R D +
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKG 223
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENS 234
Q + + + W + + P ++ R+ + +R +
Sbjct: 224 QALGAPLKGHVK-W-ITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGH 281
Query: 235 KG-VYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISG 290
KG V C+++ KI + D TIKVW+ + I+ L+ H V L L D ++ +
Sbjct: 282 KGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDF-ILRTA 340
Query: 291 SSDSTVRV--WDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEIT 348
D T +V D + M A ++ + +V+ S D ++ +WD S ++
Sbjct: 341 YHDHTGKVPESDADKVAMAKKRFEKA-ATINNKIVE-KLVSASDDFTMYLWDPESSSKPV 398
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQ 404
R L+GH+ VN V F D YI SA D +K+WN +F+ TL GH + C
Sbjct: 399 AR--LLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFS 456
Query: 405 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
RL+VS S D T+++W++ G L GH++ V + + D +++ SG D I++W
Sbjct: 457 ADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 276 (102.2 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 72/235 (30%), Positives = 123/235 (52%)
Query: 238 YCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISGSSDST 295
Y LQ H ++ S +D+T+++WD +S + VL+GH GSV C+++ I + S D T
Sbjct: 245 YHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRT 304
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLV 354
++VW+ TG ++ TL H V HL S ++ T D + V + +++ + +
Sbjct: 305 IKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPES-DADKVAMAKKRF 363
Query: 355 GHRAAVNVVDFDEKYIVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRL--VV 411
A +N EK +VSAS D T+ +W+ SS + V L GH++ + + + + +
Sbjct: 364 EKAATINN-KIVEK-LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIA 421
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDAKRIVSGAYDGKIKVWNL 464
S DN ++LW+ G + L GH V C D++ +VS + D +KVWN+
Sbjct: 422 SAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNV 476
Score = 227 (85.0 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 57/205 (27%), Positives = 99/205 (48%)
Query: 265 QCIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR 321
+C + GH ++L + ++SGS DST R+WD +TG ++TL H VL +
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 322 FS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI--------V 371
+S NG M+ T S D ++ +WD L L GH + + ++ ++
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDAKKGQ--ALGAPLKGHVKWITSLAWEPYHLQQSGHPRLA 256
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACL 430
SAS D T+++W+ S L+GHK + C+++ + + S D TI++W+ + G +
Sbjct: 257 SASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLI 316
Query: 431 RVLEGHEELVRCIRFDAKRIVSGAY 455
+ L H V + I+ AY
Sbjct: 317 QTLSAHAHRVNHLALSTDFILRTAY 341
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/128 (25%), Positives = 64/128 (50%)
Query: 353 LVGHRAAVNVVDFD---EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR- 408
+ GH A+ F +VS SGD T ++W+ + + TL GH + + Y
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNG 203
Query: 409 -LVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFDA--------KRIVSGAYDGK 458
++ +GS DNT+R+WD + G L L+GH + + + ++ R+ S + D
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 459 IKVWNLVA 466
+++W++++
Sbjct: 264 VRIWDVIS 271
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 272 (100.8 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 75/234 (32%), Positives = 117/234 (50%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVW 299
IV+ RD +I +W D+ + +TGH+ V + L D + +SGS D +R+W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D+ TGE + H + VL + FS N +V+ S+DR+I +W+ + + T+ GH+
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEA-DGHK 149
Query: 358 AAVNVVDFDEKY----IVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVV 411
V+ V F IVSAS D+T+KVWN +C+ TL GH + + L
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCA 209
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNL 464
SG D I LWD+ G L LE ++ + F R + A + I++W+L
Sbjct: 210 SGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPNRYWLCAATENSIRIWDL 262
Score = 210 (79.0 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 48/154 (31%), Positives = 85/154 (55%)
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEI--TLRRVLVGHRAAVN--VVDFDEKYIVSASGDRT 378
++ ++VT S+D+SI +W + ++ +R + GH V V+ D ++ +S S D
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGE 86
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI--ECGACLRVLE 434
+++W+ ++ E R GH + + + + +R +VS S D TI+LW+ EC + +
Sbjct: 87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEAD 146
Query: 435 GHEELVRCIRFDAKR----IVSGAYDGKIKVWNL 464
GH+E V C+RF IVS ++D +KVWNL
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Score = 208 (78.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 60/196 (30%), Positives = 97/196 (49%)
Query: 286 VIISGSSDSTVRVW-----DVNTGEMVNTLIHHCEAVLHLRFSN-GMM-VTCSKDRSIAV 338
VI++ S D ++ +W D + G + H V + S+ G ++ S D + +
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT-SSCEF-VRTLN 394
WD+ + E T R VGH V V F D + IVSAS DRTIK+WNT C++ + +
Sbjct: 90 WDLAT-GESTRR--FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEAD 146
Query: 395 GHKRGIACLQYRDRL----VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK 448
GHK ++C+++ +VS S D T+++W+++ L GH + + D
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 449 RIVSGAYDGKIKVWNL 464
SG DG I +W+L
Sbjct: 207 LCASGGKDGVILLWDL 222
Score = 189 (71.6 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 58/198 (29%), Positives = 98/198 (49%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
L D +SG D +++WD + + + GHT VL + + D R I+S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 298 VWDVNTGEMVNTLIH---HCEAVLHLRFS-NGMM---VTCSKDRSIAVWDMVSPNEITLR 350
+W+ GE T+ H E V +RFS N ++ V+ S D+++ VW++ LR
Sbjct: 131 LWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL---QNCKLR 186
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRD 407
L GH +N V + ASG D I +W+ + + + +L G C +
Sbjct: 187 NTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFS-PN 245
Query: 408 RLVVSGSSDNTIRLWDIE 425
R + +++N+IR+WD+E
Sbjct: 246 RYWLCAATENSIRIWDLE 263
Score = 147 (56.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 43/161 (26%), Positives = 77/161 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQC---IKVLTGHTGSVLCLQYDERV----IISGSSDST 295
D+ +IVS RD TIK+W+ + +C I GH V C+++ I+S S D T
Sbjct: 116 DNRQIVSASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEI-TLRRV 352
V+VW++ ++ NTL H + + S + + KD I +WD+ ++ +L
Sbjct: 175 VKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
+ H + +Y + A+ + +I++W+ S V L
Sbjct: 235 SIIHSLCFS----PNRYWLCAATENSIRIWDLESKSVVEDL 271
Score = 131 (51.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 54/244 (22%), Positives = 103/244 (42%)
Query: 119 IVSASGDRTIKVWNTSSCE-----FVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRYR 171
IV++S D++I +W + + R + GH + L + +SGS D +R
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRS 231
D S+ D L+ + + + N K+ + +
Sbjct: 91 D-LATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHK 149
Query: 232 ENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLCLQYDER 285
E V C+++ + IVS D T+KVW+ + + L GH+G + + + D
Sbjct: 150 E---WVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-LRFS-NGMMVTCSKDRSIAVWDMVS 343
+ SG D + +WD+ G+ + +L +++H L FS N + + + SI +WD+ S
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLCFSPNRYWLCAATENSIRIWDLES 264
Query: 344 PNEI 347
+ +
Sbjct: 265 KSVV 268
Score = 126 (49.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNT-SSCEF-VRTLNGHKRGIACLQYRDRLVVSG 162
+D +S+ + D + IVSAS DRTIK+WNT C++ + +GHK ++C+++
Sbjct: 106 KDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRF-------- 157
Query: 163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLN 192
S NT+ IVS+S D T+ +W+ N
Sbjct: 158 -SPNTLVPT----IVSASWDKTVKVWNLQN 182
Score = 47 (21.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 234 SKGVYC--LQY--DDHKIVSGLRDNTIKVW 259
+K +YC L + D + + SG D I+VW
Sbjct: 292 TKVIYCTSLNWSADGNTLFSGYTDGVIRVW 321
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 283 DERVIISGSSDSTVRVWDV 301
D + SG +D +RVW +
Sbjct: 305 DGNTLFSGYTDGVIRVWGI 323
Score = 45 (20.9 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 446 DAKRIVSGAYDGKIKVWNL 464
D + SG DG I+VW +
Sbjct: 305 DGNTLFSGYTDGVIRVWGI 323
Score = 39 (18.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 412 SGSSDNTIRLWDI 424
SG +D IR+W I
Sbjct: 311 SGYTDGVIRVWGI 323
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 255 (94.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 74/242 (30%), Positives = 115/242 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSL---------QCIKVLTGHTGSV--LCLQYDERVIISGS 291
D ++S RD TI VWD S+ + ++ LTGH V + + D + +SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITL 349
D T+R+WD+N G I H + VL + FS N +V+ S+D+SI +W+ ++ + T+
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTI 148
Query: 350 RRVLVGHRAAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
H V+ V F + IVSA D+ +KVWN +C GH + +
Sbjct: 149 TDDC--HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTV 206
Query: 406 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVW 462
L SG D LWD+ G L L G++ ++ + F R + A IK+W
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND-VINAMSFSPNRYWLCAAVGSSIKIW 265
Query: 463 NL 464
+L
Sbjct: 266 DL 267
Score = 157 (60.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 49/194 (25%), Positives = 92/194 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + HT VL + + D R I+SGS D ++++W+
Sbjct: 80 DGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWN 139
Query: 301 VNTGEMVNTLIHHCEA--VLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
+ T+ C V +RFS + ++V+ D+ + VW++ L+ +
Sbjct: 140 T-LAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL---GNCRLKTNHI 195
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVV 411
GH VN V + ASG D +W+ + + + TL G+ I + + +R +
Sbjct: 196 GHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWL 254
Query: 412 SGSSDNTIRLWDIE 425
+ ++I++WD+E
Sbjct: 255 CAAVGSSIKIWDLE 268
Score = 150 (57.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/114 (34%), Positives = 60/114 (52%)
Query: 366 DEKYIVSASGDRTIKVWNTSSC---------EFVRTLNGHKRGIA--CLQYRDRLVVSGS 414
D+ ++S+S D+TI VW+ S VR+L GH ++ + + +SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWNLVA 466
D T+RLWD+ G R H + V + F A ++IVSG+ D IK+WN +A
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA 142
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 62/248 (25%), Positives = 105/248 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSC---------EFVRTLNGHKRGIA--CLQYRDRLVVSGS 163
D+ ++S+S D+TI VW+ S VR+L GH ++ + + +SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 164 SDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFL 223
D T+R D Q VS+ + D L+ + + + N K+
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTK-DVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYT 147
Query: 224 LQRINCRSENSKGV-YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCL 280
+ +C ++ V + D IVS D +KVW+ + + GHTG V + +
Sbjct: 148 ITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTV 206
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK-DRSIAVW 339
D + SG D +WD+N G+ + TL + + + + FS C+ SI +W
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSSIKIW 265
Query: 340 DMVSPNEI 347
D+ EI
Sbjct: 266 DLEDKKEI 273
Score = 133 (51.9 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 52/206 (25%), Positives = 96/206 (46%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYD----ERVIISGSSDSTVR 297
D+ +IVSG RD +IK+W+ ++ + HT V +++ + VI+S D V+
Sbjct: 122 DNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVK 181
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVG 355
VW++ + I H V + S +G + KD +WD+ NE L G
Sbjct: 182 VWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLPG 238
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTL------NGHKRGIA--CLQY- 405
+ +N + F +Y + A+ +IK+W+ + + L +G RG + C+
Sbjct: 239 NDV-INAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLA 297
Query: 406 --RD-RLVVSGSSDNTIRLWDIECGA 428
+D + + +G +DN IR++ + A
Sbjct: 298 WSQDGQTLFAGYTDNIIRVYQVSIRA 323
Score = 59 (25.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 167 TIRYRDEFQIVSSSHDDTILIWD 189
T D+ ++SSS D TIL+WD
Sbjct: 24 TYTRNDKTTVLSSSRDKTILVWD 46
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 255 (94.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 74/242 (30%), Positives = 115/242 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSL---------QCIKVLTGHTGSV--LCLQYDERVIISGS 291
D ++S RD TI VWD S+ + ++ LTGH V + + D + +SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITL 349
D T+R+WD+N G I H + VL + FS N +V+ S+D+SI +W+ ++ + T+
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTI 148
Query: 350 RRVLVGHRAAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
H V+ V F + IVSA D+ +KVWN +C GH + +
Sbjct: 149 TDDC--HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTV 206
Query: 406 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVW 462
L SG D LWD+ G L L G++ ++ + F R + A IK+W
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND-VINAMSFSPNRYWLCAAVGSSIKIW 265
Query: 463 NL 464
+L
Sbjct: 266 DL 267
Score = 157 (60.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 49/194 (25%), Positives = 92/194 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + HT VL + + D R I+SGS D ++++W+
Sbjct: 80 DGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWN 139
Query: 301 VNTGEMVNTLIHHCEA--VLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
+ T+ C V +RFS + ++V+ D+ + VW++ L+ +
Sbjct: 140 T-LAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL---GNCRLKTNHI 195
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVV 411
GH VN V + ASG D +W+ + + + TL G+ I + + +R +
Sbjct: 196 GHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWL 254
Query: 412 SGSSDNTIRLWDIE 425
+ ++I++WD+E
Sbjct: 255 CAAVGSSIKIWDLE 268
Score = 150 (57.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/114 (34%), Positives = 60/114 (52%)
Query: 366 DEKYIVSASGDRTIKVWNTSSC---------EFVRTLNGHKRGIA--CLQYRDRLVVSGS 414
D+ ++S+S D+TI VW+ S VR+L GH ++ + + +SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWNLVA 466
D T+RLWD+ G R H + V + F A ++IVSG+ D IK+WN +A
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA 142
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 62/248 (25%), Positives = 105/248 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSC---------EFVRTLNGHKRGIA--CLQYRDRLVVSGS 163
D+ ++S+S D+TI VW+ S VR+L GH ++ + + +SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 164 SDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFL 223
D T+R D Q VS+ + D L+ + + + N K+
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTK-DVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYT 147
Query: 224 LQRINCRSENSKGV-YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCL 280
+ +C ++ V + D IVS D +KVW+ + + GHTG V + +
Sbjct: 148 ITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTV 206
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK-DRSIAVW 339
D + SG D +WD+N G+ + TL + + + + FS C+ SI +W
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSSIKIW 265
Query: 340 DMVSPNEI 347
D+ EI
Sbjct: 266 DLEDKKEI 273
Score = 133 (51.9 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 52/206 (25%), Positives = 96/206 (46%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYD----ERVIISGSSDSTVR 297
D+ +IVSG RD +IK+W+ ++ + HT V +++ + VI+S D V+
Sbjct: 122 DNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVK 181
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVG 355
VW++ + I H V + S +G + KD +WD+ NE L G
Sbjct: 182 VWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLPG 238
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTL------NGHKRGIA--CLQY- 405
+ +N + F +Y + A+ +IK+W+ + + L +G RG + C+
Sbjct: 239 NDV-INAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLA 297
Query: 406 --RD-RLVVSGSSDNTIRLWDIECGA 428
+D + + +G +DN IR++ + A
Sbjct: 298 WSQDGQTLFAGYTDNIIRVYQVSIRA 323
Score = 59 (25.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 167 TIRYRDEFQIVSSSHDDTILIWD 189
T D+ ++SSS D TIL+WD
Sbjct: 24 TYTRNDKTTVLSSSRDKTILVWD 46
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 266 (98.7 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 75/234 (32%), Positives = 117/234 (50%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVW 299
IV+ RD +I +W D+ + LTGH+ V + L D + +SGS D +R+W
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D+ TGE + H + VL + FS N +V+ S+DR+I +W+ + + T+ GH+
Sbjct: 91 DLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG-DGHK 149
Query: 358 AAVNVVDFDEKY----IVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVV 411
V+ V F IVSAS D+T+KVWN +C+ +L GH + + L
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCA 209
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNL 464
SG D I LWD+ G L LE ++ + F R + A + I++W+L
Sbjct: 210 SGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPNRYWLCAATENSIRIWDL 262
Score = 210 (79.0 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 49/154 (31%), Positives = 85/154 (55%)
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEI--TLRRVLVGHRAAVN--VVDFDEKYIVSASGDRT 378
++ ++VT S+D+SI +W + ++ +R L GH V V+ D ++ +S S D
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI--ECGACLRVLE 434
+++W+ ++ E R GH + + + + +R +VS S D TI+LW+ EC + +
Sbjct: 87 LRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGD 146
Query: 435 GHEELVRCIRFDAKR----IVSGAYDGKIKVWNL 464
GH+E V C+RF IVS ++D +KVWNL
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Score = 191 (72.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 59/198 (29%), Positives = 99/198 (50%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
L D +SG D +++WD + + + GHT VL + + D R I+S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 298 VWDVNTGEMVNTLIH---HCEAVLHLRFS-NGMM---VTCSKDRSIAVWDMVSPNEITLR 350
+W+ GE T+ H E V +RFS N ++ V+ S D+++ VW++ LR
Sbjct: 131 LWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL---QNCKLR 186
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRD 407
LVGH +N V + ASG D I +W+ + + + +L G C +
Sbjct: 187 NSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFS-PN 245
Query: 408 RLVVSGSSDNTIRLWDIE 425
R + +++N+IR+WD+E
Sbjct: 246 RYWLCAATENSIRIWDLE 263
Score = 145 (56.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 41/161 (25%), Positives = 79/161 (49%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT---GHTGSVLCLQYDERV----IISGSSDST 295
D+ +IVS RD TIK+W+ + +C ++ GH V C+++ I+S S D T
Sbjct: 116 DNRQIVSASRDRTIKLWNTLG-ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEI-TLRRV 352
V+VW++ ++ N+L+ H + + S + + KD I +WD+ ++ +L
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
+ H + +Y + A+ + +I++W+ S V L
Sbjct: 235 SIIHSLCFS----PNRYWLCAATENSIRIWDLESKSVVEDL 271
Score = 129 (50.5 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 55/244 (22%), Positives = 103/244 (42%)
Query: 119 IVSASGDRTIKVWNTSSCE-----FVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRYR 171
IV+AS D++I +W + + R L GH + L + +SGS D +R
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRS 231
D ++ D L+ + + + N K+ + +
Sbjct: 91 D-LATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHK 149
Query: 232 ENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLCLQYDER 285
E V C+++ + IVS D T+KVW+ + + L GH+G + + + D
Sbjct: 150 E---WVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-LRFS-NGMMVTCSKDRSIAVWDMVS 343
+ SG D + +WD+ G+ + +L +++H L FS N + + + SI +WD+ S
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLCFSPNRYWLCAATENSIRIWDLES 264
Query: 344 PNEI 347
+ +
Sbjct: 265 KSVV 268
Score = 123 (48.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNT-SSCEF-VRTLNGHKRGIACLQYRDRLVVSG 162
+D +S+ + D + IVSAS DRTIK+WNT C++ + +GHK ++C+++
Sbjct: 106 KDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRF-------- 157
Query: 163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLN 192
S NT+ IVS+S D T+ +W+ N
Sbjct: 158 -SPNTLVPT----IVSASWDKTVKVWNLQN 182
Score = 46 (21.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 283 DERVIISGSSDSTVRVWDV 301
D + SG +D VRVW +
Sbjct: 305 DGSTLFSGYTDGVVRVWGI 323
Score = 44 (20.5 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 446 DAKRIVSGAYDGKIKVWNL 464
D + SG DG ++VW +
Sbjct: 305 DGSTLFSGYTDGVVRVWGI 323
Score = 38 (18.4 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 412 SGSSDNTIRLWDI 424
SG +D +R+W I
Sbjct: 311 SGYTDGVVRVWGI 323
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 309 (113.8 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 83/257 (32%), Positives = 132/257 (51%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D +IKVWD + +C K L
Sbjct: 346 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLE 405
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ T + VNT+ H V L S+ M+ + S
Sbjct: 406 GHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGS 465
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + ++ S S +TIK+W+ S E V
Sbjct: 466 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVASQNHLYSGSY-QTIKIWDIRSLECVH 522
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 523 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQ 582
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 583 TKVFSASYDRSLRVWSM 599
Score = 217 (81.4 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 68/233 (29%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q +K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 415 CIQ--GNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 471
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ S + + S ++I +WD+ S + VL
Sbjct: 472 WDIVGTELKLKKELTGLNHWVRALVA---SQNHLYSGSY-QTIKIWDIRS---LECVHVL 524
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 525 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 584
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 585 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
Score = 211 (79.3 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 74/272 (27%), Positives = 119/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D++IKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 380 LFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWD---IQ 436
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 437 TLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 490
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + + SG TIK+WD SL+C+ VL GSV + I+ G+ ++
Sbjct: 491 -WVRALVASQNHLYSGSYQ-TIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYEN 548
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 549 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 605
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 606 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
Score = 47 (21.6 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 141 TLNGHKRGIACL-QYRDR-LVVSGSSDNTIRYRD-----EFQIVSSSHDDTIL 186
T GH+ + CL Y L+ SGSSD +I+ D + Q HD +L
Sbjct: 360 TFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVL 412
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 305 (112.4 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 98/363 (26%), Positives = 167/363 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD--EF 174
+V+ SGD T ++W+ + + T+ GH ++C+ + ++ +GS DNTIR+ D +
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
Query: 175 QIVSSS---HDDTI--LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC 229
+ + H I L W L+ + I W + L +
Sbjct: 210 SPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI---WNVK--LRTLLFT 264
Query: 230 RSENSKGVYCLQYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVI 287
S ++ + C+++ I S D TI++WD +C+ +L GH V L E V+
Sbjct: 265 LSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVL 324
Query: 288 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD-MVSPNE 346
SG+ D T + E + EA L + S +V+ S D + +WD S
Sbjct: 325 RSGAYDHTDFKPKSFSDERRKAKERY-EACL--KQSGERLVSASDDLQLILWDPQKSTKP 381
Query: 347 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI-ACL 403
IT GH+ VN F D + I +AS D ++++W+ + +F+ TL GH + C
Sbjct: 382 ITKMH---GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCA 438
Query: 404 QYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK 460
D RL+VS S D T+++WD+ L GHE+ V + + D +R+ SG D ++
Sbjct: 439 WSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVR 498
Query: 461 VWN 463
+W+
Sbjct: 499 IWS 501
Score = 242 (90.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 61/210 (29%), Positives = 105/210 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
R +C + GH G+++ Q+ +++GS D T R+WD +T + T+ H V
Sbjct: 121 RAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWV 180
Query: 318 LHLRFSN--GMMVTCSKDRSIAVWDMV--SPNEITLRR----VLVGHRAAVNVVDFDEKY 369
+ ++ ++ T S D +I WD SP LRR ++ +++ Y
Sbjct: 181 SCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPY 240
Query: 370 IV-SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECG 427
++ S S D T+++WN + TL+GH I C+++ + + S S D TIR+WD + G
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDG 300
Query: 428 ACLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
CL +L+GH V + + ++ SGAYD
Sbjct: 301 KCLHILKGHAARVNHLSLSTEHVLRSGAYD 330
Score = 240 (89.5 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIK-VLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTG 304
+ SG +DNT+++W+ V L+ + L+GHT + C+++ + I S S D T+R+WD G
Sbjct: 242 LASGSKDNTVRIWN-VKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDG 300
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS--PNEITLRRVLVGHRAAVNV 362
+ ++ L H V HL S ++ RS A +D P + R R +
Sbjct: 301 KCLHILKGHAARVNHLSLSTEHVL-----RSGA-YDHTDFKPKSFSDERRKAKERYEACL 354
Query: 363 VDFDEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTI 419
E+ +VSAS D + +W+ S + + ++GH++ + A R + + S D+++
Sbjct: 355 KQSGER-LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 420 RLWDIECGACLRVLEGHEELV-RCI-RFDAKRIVSGAYDGKIKVWNL 464
RLWD + G L L GH V +C D++ +VS + D +KVW++
Sbjct: 414 RLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDV 460
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 81/305 (26%), Positives = 135/305 (44%)
Query: 95 INTYLKPMLQRDF--ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 152
+ + KP++ + + L P+ + S S D T+++WN + TL+GH I C
Sbjct: 216 LRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITC- 274
Query: 153 QYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXX 212
+R+ + I SSS+D TI IWD + I
Sbjct: 275 ---------------VRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLS 319
Query: 213 IENNWRMGK-----FLLQRINCRSENSKGVY--CLQYDDHKIVSGLRDNTIKVWD-RVSL 264
E+ R G F + + +K Y CL+ ++VS D + +WD + S
Sbjct: 320 TEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKST 379
Query: 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
+ I + GH V + D R I + S DS+VR+WD TG+ + TL H AV +
Sbjct: 380 KPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAW 439
Query: 323 SNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT 378
S ++V+ S+D ++ VWD+ S ++ L GH V VD+ D + + S D+
Sbjct: 440 STDSRLLVSSSQDTTLKVWDVRSKK---MKFDLPGHEDQVFAVDWSPDGQRVASGGADKA 496
Query: 379 IKVWN 383
+++W+
Sbjct: 497 VRIWS 501
Score = 213 (80.0 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 64/233 (27%), Positives = 115/233 (49%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT 303
++V+G D T ++WD + I + GHT V C+ + D +I +GS D+T+R WD
Sbjct: 149 RLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKK 208
Query: 304 GEMV-NTLIHH-------CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVL 353
G + + L H C LHL +G ++ + SKD ++ +W++ TL L
Sbjct: 209 GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLR---TLLFTL 265
Query: 354 VGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVV- 411
GH A + V + + +I S+S D+TI++W+ + + L GH + L V+
Sbjct: 266 SGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLR 325
Query: 412 SGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
SG+ D+T D + + + E C++ +R+VS + D ++ +W+
Sbjct: 326 SGAYDHT----DFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWD 374
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/167 (28%), Positives = 79/167 (47%)
Query: 313 HCEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE 367
H ++ +FS + +VT S D + +WD + I + GH V+ V + D
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMK---GHTNWVSCVAWAPDA 189
Query: 368 KYIVSASGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQYR------DR---LVVSGSSDN 417
I + S D TI+ W+ + L H + I L ++ D L+ SGS DN
Sbjct: 190 SIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 418 TIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWN 463
T+R+W+++ L L GH + C+R+ + I S +YD I++W+
Sbjct: 250 TVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWD 296
Score = 55 (24.4 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQYR------DR---LVVSGSS 164
D I + S D TI+ W+ + L H + I L ++ D L+ SGS
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSK 247
Query: 165 DNTIR 169
DNT+R
Sbjct: 248 DNTVR 252
Score = 37 (18.1 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 175 QIVSSSHDDTILIWDFLNYSETPI 198
++V+ S D T +WD ++TPI
Sbjct: 149 RLVTGSGDFTARLWDC--DTQTPI 170
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 308 (113.5 bits), Expect = 6.8e-25, P = 6.8e-25
Identities = 83/257 (32%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 367 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 426
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ M+ + S
Sbjct: 427 GHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGS 486
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + E V
Sbjct: 487 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVASQNYLYSGSY-QTIKIWDIRNLECVH 543
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 544 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQ 603
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 604 TKVFSASYDRSLRVWSM 620
Score = 204 (76.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 74/271 (27%), Positives = 118/271 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 401 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWD---IQ 457
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 458 NLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 511
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + + SG TIK+WD +L+C+ VL GSV + I+ G+ ++
Sbjct: 512 -WVRALVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYEN 569
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ T E V TL H V L + + S DRS+ VW M + +
Sbjct: 570 LIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 626
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKV 381
+ L+ H+ +V + + S + D T+KV
Sbjct: 627 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
Score = 203 (76.5 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 65/232 (28%), Positives = 108/232 (46%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q +K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 436 CIQ--GNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 492
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ S + + S ++I +WD+ + VL
Sbjct: 493 WDIVGTELKLKKELTGLNHWVRALVA---SQNYLYSGSY-QTIKIWDI---RNLECVHVL 545
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ + E VRTL GH +A + D+
Sbjct: 546 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQTK 605
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKV 461
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KV
Sbjct: 606 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 83/295 (28%), Positives = 130/295 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 381 TFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 434
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 435 --LCIQGNKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNMLFSGSL 487
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ E V+ L
Sbjct: 488 KAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQ 546
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ + ++ R L GH A+ V+ D+
Sbjct: 547 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQV---RTLTGHVGTVYALAVISTPDQ 603
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRL 421
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++
Sbjct: 604 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKV 657
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 308 (113.5 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 83/257 (32%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 377 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 436
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ M+ + S
Sbjct: 437 GHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGS 496
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + E V
Sbjct: 497 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVASQNYLYSGSY-QTIKIWDIRNLECVH 553
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 554 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQ 613
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 614 TKVFSASYDRSLRVWSM 630
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 75/272 (27%), Positives = 119/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 411 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWD---IQ 467
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 468 NLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 521
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + + SG TIK+WD +L+C+ VL GSV + I+ G+ ++
Sbjct: 522 -WVRALVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYEN 579
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ T E V TL H V L + + S DRS+ VW M + +
Sbjct: 580 LIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 636
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 637 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 214 (80.4 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 66/233 (28%), Positives = 109/233 (46%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q +K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 446 CIQ--GNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 502
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ S + + S ++I +WD+ + VL
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVA---SQNYLYSGSY-QTIKIWDI---RNLECVHVL 555
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ + E VRTL GH +A + D+
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQTK 615
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 616 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 208 (78.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 84/296 (28%), Positives = 131/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 391 TFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 444
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 445 --LCIQGNKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNMLFSGSL 497
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ E V+ L
Sbjct: 498 KAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQ 556
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ + ++ R L GH A+ V+ D+
Sbjct: 557 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQV---RTLTGHVGTVYALAVISTPDQ 613
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 614 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 668
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 287 (106.1 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 72/237 (30%), Positives = 126/237 (53%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWD 300
D + S D TIK+W + + L GH + + D ++I S S D T+++WD
Sbjct: 57 DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWD 116
Query: 301 VNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
V +G+MV TL H E V + F+ + ++V+ S D ++ +WD V+ E T +++ H
Sbjct: 117 VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD-VNTGECT--KMISAHSD 173
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQY--RDRLVVSG 413
V V F D +VS S D T+++W+T++ + + T++ + ++ +++ + V++G
Sbjct: 174 PVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG 233
Query: 414 SSDNTIRLWDIECGA-CLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
+ DNT+RLW CL+ GH+ CI F K IV+G+ D I ++NL
Sbjct: 234 TLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNL 290
Score = 272 (100.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 71/238 (29%), Positives = 123/238 (51%)
Query: 244 DHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D K++ S D TIK+WD S + +K L GH V + ++ + +I+SGS D VR+WD
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 301 VNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
VNTGE + H + V + F+ +G ++V+ S D ++ +WD + L +
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ--LLNTISTEDGK 216
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVW---NTSSCEFVRTLNGHKRGIACLQYR-----DR 408
V+ V F K++++ + D T+++W N C ++T GHK C+ +
Sbjct: 217 EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC--LKTYTGHKNEKYCIFSTFSVTCGK 274
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAY--DGKIKVW 462
+V+GS DN I +++++ ++ L GHE++V + I SGA D +K+W
Sbjct: 275 WIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 251 (93.4 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 51/128 (39%), Positives = 84/128 (65%)
Query: 343 SPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
+PN I L+ L GH +++ V F D K++ SAS D+TIK+W +F RTL GHK GI
Sbjct: 33 TPNYI-LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGI 91
Query: 401 ACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYD 456
+ + + +D +L+ S S D TI++WD+E G ++ L+GH+E V + F+ + IVSG++D
Sbjct: 92 SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFD 151
Query: 457 GKIKVWNL 464
+++W++
Sbjct: 152 ENVRIWDV 159
Score = 220 (82.5 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 69/243 (28%), Positives = 115/243 (47%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D K I SAS D+TIK+W+ S + V+TL GHK + + + + L+VSGS D +R D
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 173 ----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
E + S+H D + F N T + LL I+
Sbjct: 159 VNTGECTKMISAHSDPVTGVHF-NRDGTLVVSGSYDGTVRIWDTTTGQ------LLNTIS 211
Query: 229 CRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYDER 285
+E+ K V +++ + +++G DNT+++W + +C+K TGH C+
Sbjct: 212 --TEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFS 269
Query: 286 V-----IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS----KDRSI 336
V I++GS D+ + ++++ T E+V TL H + VL + + S KDRS+
Sbjct: 270 VTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSV 329
Query: 337 AVW 339
+W
Sbjct: 330 KIW 332
Score = 162 (62.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 61/235 (25%), Positives = 102/235 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D K++ SAS D+TIK+W +F RTL GHK GI+ D ++ S D+ +
Sbjct: 57 DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGIS-----D---IAWSQDSKL------ 102
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM-GKF----------- 222
I S+S D TI IWD + ++N + G F
Sbjct: 103 -ICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 223 --LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLC 279
+ I+ S+ GV+ D +VSG D T+++WD + Q + ++ G V
Sbjct: 162 GECTKMISAHSDPVTGVH-FNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSF 220
Query: 280 LQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
+++ + +++G+ D+T+R+W N + + + FS VTC K
Sbjct: 221 VKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFST-FSVTCGK 274
Score = 124 (48.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 53/201 (26%), Positives = 91/201 (45%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRY 170
N IVS S D +++W+ ++ E + ++ H + + + RD LVVSGS D T+R
Sbjct: 139 NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Query: 171 RDEF--QIVSS-SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
D Q++++ S +D + F+ +S NN K L+
Sbjct: 199 WDTTTGQLLNTISTEDGKEV-SFVKFSPNGKFVLAGTLDNTLRLWSYNN---NKKCLKTY 254
Query: 228 NCRSENSKGVYCL----QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
+N K YC+ K IV+G DN I +++ + + ++ L GH VL +
Sbjct: 255 TGH-KNEK--YCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVAC 311
Query: 283 D--ERVIISGS--SDSTVRVW 299
E +I SG+ D +V++W
Sbjct: 312 HPTENIIASGALEKDRSVKIW 332
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 307 (113.1 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 72/227 (31%), Positives = 122/227 (53%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
++C+ + ++SG D +K+WD V+L+C +VL+GH G V L + SGSSD T+
Sbjct: 435 IWCMTVTNGMLISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTLAVIGNRLFSGSSDQTI 494
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
RVWD+ T E ++ L V L + G + + S I VWD+ + + + L G+
Sbjct: 495 RVWDLETFECLSVL-RDDNTVCALVIAAGYLFSGSFQH-IKVWDLETFECV---QTLKGN 549
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 416
V + Y+ S + + ++VW+ ++ E V+T+ G I L +R +++G+ +
Sbjct: 550 SHWVRALTVSGGYLYSGAYN-VVRVWDLANFECVQTIPGGSGSIYSLAVSNRRLLAGTYE 608
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
NTI +W+++ + LEGH V + K+ SG+YD IKVWN
Sbjct: 609 NTIVVWNLDTFEIINKLEGHIGAVYTLAVSDKKFYSGSYDSTIKVWN 655
Score = 252 (93.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 64/226 (28%), Positives = 111/226 (49%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTV 296
V+ L +++ SG D TI+VWD + +C+ VL +V L + SGS +
Sbjct: 475 VHTLAVIGNRLFSGSSDQTIRVWDLETFECLSVLRDDN-TVCALVIAAGYLFSGSFQH-I 532
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+VWD+ T E V TL + V L S G + + + + + VWD+ + + + + G
Sbjct: 533 KVWDLETFECVQTLKGNSHWVRALTVSGGYLYSGAYN-VVRVWDLANFECV---QTIPGG 588
Query: 357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 416
++ + + +++ + + TI VWN + E + L GH + L D+ SGS D
Sbjct: 589 SGSIYSLAVSNRRLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVSDKKFYSGSYD 648
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
+TI++W+ + C++ L H V I + + SG+ D IKVW
Sbjct: 649 STIKVWN-DSLVCVQTLNRHTSSVESIVVSSGCVFSGSADNSIKVW 693
Score = 238 (88.8 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 58/202 (28%), Positives = 100/202 (49%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-LRF 322
L+C GH G + C+ ++ISGSSD V++WD+ T + L H E ++H L
Sbjct: 422 LKCKGTFVGHNGPIWCMTVTNGMLISGSSDMKVKIWDLVTLKCKQVLSGH-EGIVHTLAV 480
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ + S D++I VWD+ + +++ R V + Y+ S S IKVW
Sbjct: 481 IGNRLFSGSSDQTIRVWDLETFECLSVLR----DDNTVCALVIAAGYLFSGSFQH-IKVW 535
Query: 383 NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 442
+ + E V+TL G+ + L + SG+ N +R+WD+ C++ + G +
Sbjct: 536 DLETFECVQTLKGNSHWVRALTVSGGYLYSGAY-NVVRVWDLANFECVQTIPGGSGSIYS 594
Query: 443 IRFDAKRIVSGAYDGKIKVWNL 464
+ +R+++G Y+ I VWNL
Sbjct: 595 LAVSNRRLLAGTYENTIVVWNL 616
Score = 234 (87.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 79/283 (27%), Positives = 130/283 (45%)
Query: 141 TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQX 200
T GH I C+ + +++SGSSD ++ D +V+ + + + ++ I
Sbjct: 427 TFVGHNGPIWCMTVTNGMLISGSSDMKVKIWD---LVTLKCKQVLSGHEGIVHTLAVIGN 483
Query: 201 XXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260
+ W + F + R +N+ V L + SG + IKVWD
Sbjct: 484 RLFSGSSDQTIRV---WDLETFECLSV-LRDDNT--VCALVIAAGYLFSGSFQH-IKVWD 536
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL 320
+ +C++ L G++ V L + SG+ + VRVWD+ E V T+ ++ L
Sbjct: 537 LETFECVQTLKGNSHWVRALTVSGGYLYSGAYN-VVRVWDLANFECVQTIPGGSGSIYSL 595
Query: 321 RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIK 380
SN ++ + + +I VW++ EI + L GH AV + +K S S D TIK
Sbjct: 596 AVSNRRLLAGTYENTIVVWNL-DTFEIINK--LEGHIGAVYTLAVSDKKFYSGSYDSTIK 652
Query: 381 VWNTSS-CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 422
VWN S C V+TLN H + + V SGS+DN+I++W
Sbjct: 653 VWNDSLVC--VQTLNRHTSSVESIVVSSGCVFSGSADNSIKVW 693
Score = 165 (63.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 39/130 (30%), Positives = 67/130 (51%)
Query: 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
S+ + D+ P ++ + VGH + + ++S S D +K+W+ + + + L+
Sbjct: 411 SVDIVDLKIP-QLKCKGTFVGHNGPIWCMTVTNGMLISGSSDMKVKIWDLVTLKCKQVLS 469
Query: 395 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA 454
GH+ + L + SGSSD TIR+WD+E CL VL + V + A + SG+
Sbjct: 470 GHEGIVHTLAVIGNRLFSGSSDQTIRVWDLETFECLSVLRD-DNTVCALVIAAGYLFSGS 528
Query: 455 YDGKIKVWNL 464
+ IKVW+L
Sbjct: 529 FQ-HIKVWDL 537
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/184 (29%), Positives = 82/184 (44%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD--EFQ 175
Y+ S S IKVW+ + E V+TL G+ + L + SG+ N +R D F+
Sbjct: 523 YLFSGSFQH-IKVWDLETFECVQTLKGNSHWVRALTVSGGYLYSGAY-NVVRVWDLANFE 580
Query: 176 IVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSK 235
V + + I+ L S + W + F + IN +
Sbjct: 581 CVQTIPGGSGSIYS-LAVSNRRLLAGTYENTIVV-------WNLDTFEI--INKLEGHIG 630
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
VY L D K SG D+TIKVW+ SL C++ L HT SV + + SGS+D++
Sbjct: 631 AVYTLAVSDKKFYSGSYDSTIKVWND-SLVCVQTLNRHTSSVESIVVSSGCVFSGSADNS 689
Query: 296 VRVW 299
++VW
Sbjct: 690 IKVW 693
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 297 (109.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 81/260 (31%), Positives = 134/260 (51%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
+E+NW G L Q + S+ + V D + SG D TIK+WD S + L G
Sbjct: 26 VEDNW--GPEL-QTLEGHSDWIETV-TFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEG 81
Query: 273 HTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVT 329
H+ SV + + +++ SGSSD+T+++W+ + + +T+ H + V + FS NG +
Sbjct: 82 HSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL-- 139
Query: 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC 387
W+ P +L+ + GH V V F D + + S S ++TIK+W++++C
Sbjct: 140 ---------WN---PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATC 187
Query: 388 EFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445
TL GH + L + RL+ SGS+D TI+LWD G+ LEGH + + F
Sbjct: 188 GLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAF 247
Query: 446 --DAKRIVSGAYDGKIKVWN 463
+ + + SG+ D IK+W+
Sbjct: 248 SPNGQLLASGSSDATIKLWD 267
Score = 268 (99.4 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 76/248 (30%), Positives = 124/248 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM 306
+ SG D TIK+W+ S + GH+ V E V S + ++W+ G +
Sbjct: 98 LASGSSDTTIKLWNSASDSLKHTMEGHSDRV------ESVAFSPNG----QLWNPAIGSL 147
Query: 307 VNTLIHHCEAVLHLRFS-NGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
+T+ H + VL + FS +G ++ S +++I +WD + L+ L GH V +
Sbjct: 148 KHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCG---LKHTLGGHSNWVLPLV 204
Query: 365 F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR 420
F D + + S S D TIK+W+ S TL GH I L + +L+ SGSSD TI+
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIK 264
Query: 421 LWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLC 478
LWD G+ L+GH ++V + F D++ + SG+ D IK+W+ + + T
Sbjct: 265 LWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTPGI 324
Query: 479 LRTLVVSI 486
+R++ SI
Sbjct: 325 VRSIEFSI 332
Score = 109 (43.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
D + + S S D TIK+W+ S TL GH I L + +L+ SGSSD TI+ D
Sbjct: 208 DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Query: 173 ----EFQIVSSSHDDTIL 186
F+ H D +L
Sbjct: 268 TATGSFRHTLKGHSDMVL 285
Score = 107 (42.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D + + S S ++TIK+W++++C TL GH + L + RL+ SGS+D TI+ D
Sbjct: 166 DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWD 225
Score = 55 (24.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVWD 300
D + SG DNTIK+WD + +K G V +++ + +I+ +++ W
Sbjct: 292 DSQLLESGSGDNTIKLWDPAT-GILKHSMRTPGIVRSIEFSIELPQLITNLGTFSIQAW- 349
Query: 301 VNTG 304
+TG
Sbjct: 350 -HTG 352
Score = 48 (22.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 160 VSGSSD--NTIRYRDEFQIVSS-SHDDTILIWD 189
+ G SD T+ + + ++++S S+D TI +WD
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD 69
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 299 (110.3 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 81/257 (31%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 377 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 436
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ M+ + S
Sbjct: 437 GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGS 496
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + + +
Sbjct: 497 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIH 553
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 554 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQ 613
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 614 TKVFSASYDRSLRVWSM 630
Score = 209 (78.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 67/233 (28%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 446 CIQ--GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 502
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + + S ++I +WD+ + + I VL
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVA---AQSYLYSGSY-QTIKIWDIRTLDCI---HVL 555
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 615
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 616 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 208 (78.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 391 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 444
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 445 --LCIQGCKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNMLFSGSL 497
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 498 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQ 556
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 557 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 613
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 614 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 668
Score = 203 (76.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 411 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWD---IQ 467
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 468 NLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 521
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 522 -WVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 579
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 580 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 636
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 637 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 43 (20.2 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 13/61 (21%), Positives = 28/61 (45%)
Query: 2 TILYDPNRKKEPAPQFASEKEMCPYLTI-SVSSASPQLPPMTILYDPNRKKEPAPQFASE 60
T+ Y P +++ P ++ + +++ S+ S S T P ++EP P +E
Sbjct: 65 TLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSL-PEEEEEPEPLVFAE 123
Query: 61 K 61
+
Sbjct: 124 Q 124
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 279 (103.3 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 68/226 (30%), Positives = 119/226 (52%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
D T+K+W+ + C + LTGH V + D R ++S S D T++++++ T M TL
Sbjct: 108 DKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
Query: 311 IHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D 366
H V F+ + ++V+ S D S+ +WD+ + I + L H V+ V F D
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI---KTLPAHSDPVSAVSFNRD 224
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
I S S D +++W+T++ + ++TL + +A +++ + +++ + D+T++LWD
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Query: 424 IECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
G L+ GHE CI F K I+SG+ D KI +WNL
Sbjct: 285 FSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 272 (100.8 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 73/263 (27%), Positives = 132/263 (50%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
W M + +R + + GV + + D +VS D T+K+++ V+ + K L GH
Sbjct: 114 WNMDHMICERT--LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHN 171
Query: 275 GSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTC- 330
V C ++ + +++SGS D +VR+WDV TG + TL H + V + F+ +G ++
Sbjct: 172 NYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCE 388
S D + +WD + N ++ ++ V V F KYI++++ D T+K+W+ S +
Sbjct: 232 SYDGLVRIWD--TANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK 289
Query: 389 FVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
++ GH+ C+ + ++SGS D I +W+++ ++ LEGH + V
Sbjct: 290 TLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLAS 349
Query: 444 RFDAKR--IVSGAY--DGKIKVW 462
+ I SGA D KI +W
Sbjct: 350 DCHPVQNIIASGALEPDNKIHIW 372
Score = 270 (100.1 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 54/167 (32%), Positives = 97/167 (58%)
Query: 305 EMVNTLIHHCEAVLHLRFSN-GMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+++ TL H +++ +FS G + T S D+++ +W+M + + R L GH+ VN
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGVND 134
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 418
+ + D + +VSAS D+T+K++ + +TL GH + C + + LVVSGS D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
+R+WD++ G C++ L H + V + F D I SG+YDG +++W+
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 213 (80.0 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 55/211 (26%), Positives = 111/211 (52%)
Query: 264 LQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR 321
L C L GHT S+ ++ + + + S+D TV++W+++ TL H V +
Sbjct: 79 LMC--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 322 FSNGM--MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDR 377
+S+ +V+ S D+++ ++++V+ + + L GH V +F+ + +VS S D
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 378 TIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVLEG 435
++++W+ + ++TL H ++ + + RD L+ SGS D +R+WD G C++ L
Sbjct: 194 SVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 436 HEEL-VRCIRF--DAKRIVSGAYDGKIKVWN 463
E V ++F + K I++ D +K+W+
Sbjct: 254 DENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 62/241 (25%), Positives = 102/241 (42%)
Query: 72 SEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVW 131
S+ + E + SRM GH N Y+ F N +VS S D ++++W
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGH-NNYV-------FCCNF-NPQSSLVVSGSFDESVRIW 198
Query: 132 NTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRYRDEF--QIVSSSHDDTILI 187
+ + ++TL H ++ + + RD L+ SGS D +R D Q + + DD
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 188 WDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCL----QYD 243
F+ +S P + + + GK L Q ENSK YC+
Sbjct: 259 VAFVKFS--PNGKYILASNLDSTLKLWD-FSKGKTLKQYTG--HENSK--YCIFANFSVT 311
Query: 244 DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS--SDSTVRV 298
K I+SG D I +W+ + + ++ L GHT VL + +I SG+ D+ + +
Sbjct: 312 GGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371
Query: 299 W 299
W
Sbjct: 372 W 372
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ ++S D+T+K+WN RTL GHK G+ + + R VVS S D T++ F
Sbjct: 100 KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKI---F 156
Query: 175 QIVSSSHDDTI 185
+IV+S T+
Sbjct: 157 EIVTSRMTKTL 167
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 279 (103.3 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 68/226 (30%), Positives = 119/226 (52%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
D T+K+W+ + C + LTGH V + D R ++S S D T++++++ T M TL
Sbjct: 108 DKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
Query: 311 IHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D 366
H V F+ + ++V+ S D S+ +WD+ + I + L H V+ V F D
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI---KTLPAHSDPVSAVSFNRD 224
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
I S S D +++W+T++ + ++TL + +A +++ + +++ + D+T++LWD
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Query: 424 IECGACLRVLEGHEELVRCI--RFDA---KRIVSGAYDGKIKVWNL 464
G L+ GHE CI F K I+SG+ D KI +WNL
Sbjct: 285 FSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 272 (100.8 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 73/263 (27%), Positives = 132/263 (50%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
W M + +R + + GV + + D +VS D T+K+++ V+ + K L GH
Sbjct: 114 WNMDHMICERT--LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHN 171
Query: 275 GSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTC- 330
V C ++ + +++SGS D +VR+WDV TG + TL H + V + F+ +G ++
Sbjct: 172 NYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCE 388
S D + +WD + N ++ ++ V V F KYI++++ D T+K+W+ S +
Sbjct: 232 SYDGLVRIWD--TANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK 289
Query: 389 FVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
++ GH+ C+ + ++SGS D I +W+++ ++ LEGH + V
Sbjct: 290 TLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLAS 349
Query: 444 RFDAKR--IVSGAY--DGKIKVW 462
+ I SGA D KI +W
Sbjct: 350 DCHPVQNIIASGALEPDNKIHIW 372
Score = 270 (100.1 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 54/167 (32%), Positives = 97/167 (58%)
Query: 305 EMVNTLIHHCEAVLHLRFSN-GMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+++ TL H +++ +FS G + T S D+++ +W+M + + R L GH+ VN
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGVND 134
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 418
+ + D + +VSAS D+T+K++ + +TL GH + C + + LVVSGS D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
+R+WD++ G C++ L H + V + F D I SG+YDG +++W+
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 213 (80.0 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 55/211 (26%), Positives = 111/211 (52%)
Query: 264 LQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR 321
L C L GHT S+ ++ + + + S+D TV++W+++ TL H V +
Sbjct: 79 LMC--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 322 FSNGM--MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDR 377
+S+ +V+ S D+++ ++++V+ + + L GH V +F+ + +VS S D
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 378 TIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVLEG 435
++++W+ + ++TL H ++ + + RD L+ SGS D +R+WD G C++ L
Sbjct: 194 SVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 436 HEEL-VRCIRF--DAKRIVSGAYDGKIKVWN 463
E V ++F + K I++ D +K+W+
Sbjct: 254 DENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 62/241 (25%), Positives = 102/241 (42%)
Query: 72 SEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVW 131
S+ + E + SRM GH N Y+ F N +VS S D ++++W
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGH-NNYV-------FCCNF-NPQSSLVVSGSFDESVRIW 198
Query: 132 NTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRYRDEF--QIVSSSHDDTILI 187
+ + ++TL H ++ + + RD L+ SGS D +R D Q + + DD
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 188 WDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCL----QYD 243
F+ +S P + + + GK L Q ENSK YC+
Sbjct: 259 VAFVKFS--PNGKYILASNLDSTLKLWD-FSKGKTLKQYTG--HENSK--YCIFANFSVT 311
Query: 244 DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS--SDSTVRV 298
K I+SG D I +W+ + + ++ L GHT VL + +I SG+ D+ + +
Sbjct: 312 GGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371
Query: 299 W 299
W
Sbjct: 372 W 372
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ ++S D+T+K+WN RTL GHK G+ + + R VVS S D T++ F
Sbjct: 100 KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKI---F 156
Query: 175 QIVSSSHDDTI 185
+IV+S T+
Sbjct: 157 EIVTSRMTKTL 167
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 299 (110.3 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 81/257 (31%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 301 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 360
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ M+ + S
Sbjct: 361 GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGS 420
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + + +
Sbjct: 421 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIH 477
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 478 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQ 537
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 538 TKVFSASYDRSLRVWSM 554
Score = 209 (78.6 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 67/233 (28%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 370 CIQ--GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 426
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + + S ++I +WD+ + + I VL
Sbjct: 427 WDIVGTELKLKKELTGLNHWVRALVA---AQSYLYSGSY-QTIKIWDIRTLDCI---HVL 479
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 480 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 539
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 540 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
Score = 208 (78.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 315 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 368
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 369 --LCIQGCKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNMLFSGSL 421
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 422 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQ 480
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 481 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 537
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 538 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 592
Score = 203 (76.5 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 335 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWD---IQ 391
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 392 NLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 445
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 446 -WVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 503
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 504 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 560
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 561 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 299 (110.3 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/257 (31%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 336 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 395
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ M+ + S
Sbjct: 396 GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGS 455
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + + +
Sbjct: 456 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIH 512
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 513 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQ 572
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 573 TKVFSASYDRSLRVWSM 589
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 67/233 (28%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 405 CIQ--GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 461
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + + S ++I +WD+ + + I VL
Sbjct: 462 WDIVGTELKLKKELTGLNHWVRALVA---AQSYLYSGSY-QTIKIWDIRTLDCI---HVL 514
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 515 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 574
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 575 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 350 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 403
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 404 --LCIQGCKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNMLFSGSL 456
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 457 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQ 515
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 516 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 572
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 573 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 627
Score = 203 (76.5 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 370 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWD---IQ 426
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 427 NLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 480
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 481 -WVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 538
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 539 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 595
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 596 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 296 (109.3 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 81/261 (31%), Positives = 132/261 (50%)
Query: 215 NNWRMGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCI 267
N +G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C
Sbjct: 215 NTGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQ 274
Query: 268 KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM 327
K L GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ ++
Sbjct: 275 KTLEGHDGIVLALCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLL 334
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC 387
+ S ++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ +
Sbjct: 335 FSGSL-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTL 391
Query: 388 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445
+ + L + + + +V G+ +N I +WDIE +R L GH V +
Sbjct: 392 DCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVIS 451
Query: 446 --DAKRIVSGAYDGKIKVWNL 464
D ++ S +YD ++VW++
Sbjct: 452 TPDQTKVFSASYDRSLRVWSM 472
Score = 209 (78.6 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 233 TFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 286
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 287 --LCIQGCRLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNLLFSGSL 339
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 340 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQ 398
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 399 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 455
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 456 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 510
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 66/233 (28%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q ++ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 288 CIQ--GCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKA-IKV 344
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + + S ++I +WD+ + + I VL
Sbjct: 345 WDIVGTELKLKKELTGLNHWVRALVA---AQSYLYSGSY-QTIKIWDIRTLDCI---HVL 397
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 398 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 457
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 458 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
Score = 203 (76.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 253 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCRLYSGSADCTIIVWD---IQ 309
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 310 NLQKVNTIRAHD------NPVCTLVSSHNLLFSGSLKAIKVWDIVGTELKLKKELTGLNH 363
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 364 -WVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 421
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 422 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 478
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 479 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 295 (108.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 80/257 (31%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 377 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 436
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ ++ + S
Sbjct: 437 GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGS 496
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + + +
Sbjct: 497 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIH 553
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 554 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQ 613
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 614 TKVFSASYDRSLRVWSM 630
Score = 212 (79.7 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 68/233 (29%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q K+ SG D TI VWD +LQ + + H V L V+ SGS + ++V
Sbjct: 446 CIQ--GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKA-IKV 502
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + + S ++I +WD+ + + I VL
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVA---AQSYLYSGSY-QTIKIWDIRTLDCI---HVL 555
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 615
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 616 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 210 (79.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 391 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 444
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 445 --LCIQGCKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNVLFSGSL 497
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 498 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQ 556
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 557 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 613
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 614 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 668
Score = 203 (76.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 411 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWD---IQ 467
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 468 NLQKVNTIRAHD------NPVCTLVSSHNVLFSGSLKAIKVWDIVGTELKLKKELTGLNH 521
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 522 -WVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 579
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 580 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 636
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 637 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 43 (20.2 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 13/61 (21%), Positives = 28/61 (45%)
Query: 2 TILYDPNRKKEPAPQFASEKEMCPYLTI-SVSSASPQLPPMTILYDPNRKKEPAPQFASE 60
T+ Y P +++ P ++ + +++ S+ S S T P ++EP P +E
Sbjct: 65 TLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSL-PEEEEEPEPLVFAE 123
Query: 61 K 61
+
Sbjct: 124 Q 124
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 298 (110.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 81/257 (31%), Positives = 131/257 (50%)
Query: 219 MGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCIKVLT 271
+G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C K L
Sbjct: 376 LGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLE 435
Query: 272 GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS 331
GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ M+ + S
Sbjct: 436 GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGS 495
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR 391
++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ + + +
Sbjct: 496 L-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQTYLYSGSY-QTIKIWDIRTLDCIH 552
Query: 392 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DA 447
L + + + +V G+ +N I +WDIE +R L GH V + D
Sbjct: 553 VLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQ 612
Query: 448 KRIVSGAYDGKIKVWNL 464
++ S +YD ++VW++
Sbjct: 613 TKVFSASYDRSLRVWSM 629
Score = 208 (78.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 66/233 (28%), Positives = 108/233 (46%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q K+ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 445 CIQ--GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKV 501
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + ++I +WD+ + + I VL
Sbjct: 502 WDIVGTELKLKKELTGLNHWVRALVAAQ----TYLYSGSYQTIKIWDIRTLDCI---HVL 554
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 555 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 614
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 615 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
Score = 208 (78.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 390 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 443
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 444 --LCIQGCKLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNMLFSGSL 496
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 497 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQTYLYSGSYQ-TIKIWDIRTLDCIHVLQ 555
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 556 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 612
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 613 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 667
Score = 202 (76.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 410 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWD---IQ 466
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 467 NLQKVNTIRAHD------NPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNH 520
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 521 -WVRALVAAQTYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 578
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 579 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 635
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 636 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
Score = 39 (18.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 12/61 (19%), Positives = 28/61 (45%)
Query: 2 TILYDPNRKKEPAPQFASEKEMCPYLTI-SVSSASPQLPPMTILYDPNRKKEPAPQFASE 60
++ Y P +++ P ++ + +++ S+ S S T P ++EP P +E
Sbjct: 64 SLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSL-PEEEEEPEPLVFAE 122
Query: 61 K 61
+
Sbjct: 123 Q 123
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 269 (99.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 70/243 (28%), Positives = 118/243 (48%)
Query: 227 INCRSENSK-GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--D 283
+ R E K GV+ ++ ++ +VSG D T++VW+ +C + GH + CL+
Sbjct: 383 LEARLEGHKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVP 442
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS 343
R+I G V + + + +V+ H V L + SI W+ +
Sbjct: 443 SRLIRHG-----VEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEK-N 496
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
P + L+GH +V + +VS S D +I++W S+ E + L GH I +
Sbjct: 497 PYFV---HTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSV 553
Query: 404 QYR-DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKV 461
Y +R + +SGS D +IR+WD+ G C VLEGH+ V + R++SG+ D I++
Sbjct: 554 LYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRI 613
Query: 462 WNL 464
W+L
Sbjct: 614 WDL 616
Score = 250 (93.1 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 77/283 (27%), Positives = 134/283 (47%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRDE 173
E +VS S D+T++VWN + GH I CL+ RL+ G I D+
Sbjct: 401 ENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVE---IVEPDQ 457
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSEN 233
IVS S D T+ +W ++ P + W + + + +++
Sbjct: 458 PYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSI--------DRWEKNPYFVHTLIGHTDS 509
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL-QCIKVLTGHTGSVLCLQYD-ER-VIISG 290
+ + Y D +VSG D++I++W RVS +C+ L GH+ + + Y+ ER + ISG
Sbjct: 510 VRTIS--GYGDI-LVSGSYDSSIRIW-RVSTGECLYHLRGHSLRIYSVLYEPERNICISG 565
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR 350
S D ++RVWD++TG L H V L +++ S D +I +WD+ + +
Sbjct: 566 SMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLM-- 623
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
VL + ++ DE I+S + D ++K+W+ + + +R L
Sbjct: 624 -VLPSNSGYISSFVSDEHKIISGN-DGSVKLWDVRTGKLLRFL 664
Score = 248 (92.4 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 61/206 (29%), Positives = 111/206 (53%)
Query: 251 LRDNTIKV--WDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVN 308
L DNT + W++ + + L GHT SV + +++SGS DS++R+W V+TGE +
Sbjct: 483 LPDNTNSIDRWEK-NPYFVHTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLY 541
Query: 309 TLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD 366
L H + + + + ++ S D+SI VWD+ + T + VL GH A V +++
Sbjct: 542 HLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG---TCKYVLEGHDAFVTLLNVF 598
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426
+ ++S S D TI++W+ ++ + + L + I+ + ++SG+ D +++LWD+
Sbjct: 599 QNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKIISGN-DGSVKLWDVRT 657
Query: 427 GACLRVLEGHEELVRCIRFDAKRIVS 452
G LR L + + FDA R V+
Sbjct: 658 GKLLRFLLTDLTKIWHVDFDAMRCVA 683
Score = 220 (82.5 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 59/171 (34%), Positives = 97/171 (56%)
Query: 299 WDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
W+ N V+TLI H ++V + ++V+ S D SI +W VS E L GH
Sbjct: 493 WEKNP-YFVHTLIGHTDSVRTISGYGDILVSGSYDSSIRIW-RVSTGECLYH--LRGHSL 548
Query: 359 AVNVVDFD-EKYI-VSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQ-YRDRLVVSG 413
+ V ++ E+ I +S S D++I+VW+ T +C++V L GH + L +++RL+ SG
Sbjct: 549 RIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYV--LEGHDAFVTLLNVFQNRLI-SG 605
Query: 414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
S+D+TIR+WD+ G L VL + + D +I+SG DG +K+W++
Sbjct: 606 SADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKIISGN-DGSVKLWDV 655
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 60/224 (26%), Positives = 106/224 (47%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE 305
+I++ TI++ + ++ L GH V ++ E ++SGS D TVRVW++ +
Sbjct: 363 RIITTSGSGTIQIHNAITGVLEARLEGHKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAK 422
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV-- 363
+ H + L ++V R V ++V P++ + H V +
Sbjct: 423 CTHIFRGHISIIRCLE----ILVPSRLIRH-GV-EIVEPDQPYIVSGSRDHTLRVWKLPK 476
Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRDRLVVSGSSDNTIRLW 422
+ D Y+ +I W + FV TL GH + + Y D ++VSGS D++IR+W
Sbjct: 477 NTDPPYL--PDNTNSIDRWEKNPY-FVHTLIGHTDSVRTISGYGD-ILVSGSYDSSIRIW 532
Query: 423 DIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
+ G CL L GH + + ++ +R +SG+ D I+VW+L
Sbjct: 533 RVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDL 576
Score = 172 (65.6 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 45/143 (31%), Positives = 73/143 (51%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
+S +Y + Y+ + +SG D +I+VWD + C VL GH V L + +ISG
Sbjct: 546 HSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISG 605
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR 350
S+DST+R+WD+NTG+ + L + + S+ + D S+ +WD+ + L
Sbjct: 606 SADSTIRIWDLNTGKPLMVLPSNSGYISSF-VSDEHKIISGNDGSVKLWDVRTGK---LL 661
Query: 351 RVLVGHRAAVNVVDFDEKYIVSA 373
R L+ + VDFD V+A
Sbjct: 662 RFLLTDLTKIWHVDFDAMRCVAA 684
Score = 164 (62.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 429
I++ SG TI++ N + L GHK G+ ++ + +VSGS D T+R+W+IE C
Sbjct: 364 IITTSGSGTIQIHNAITGVLEARLEGHKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKC 423
Query: 430 LRVLEGHEELVRCIRF----------------DAKRIVSGAYDGKIKVWNLVAALDP 470
+ GH ++RC+ D IVSG+ D ++VW L DP
Sbjct: 424 THIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDP 480
Score = 92 (37.4 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 168
SLL + D I++ SG TI++ N + L GHK G+ ++ + +VSGS D T+
Sbjct: 356 SLLLHKDR--IITTSGSGTIQIHNAITGVLEARLEGHKEGVWAVKIHENTLVSGSIDKTV 413
Query: 169 R 169
R
Sbjct: 414 R 414
Score = 76 (31.8 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 38/121 (31%), Positives = 51/121 (42%)
Query: 80 VENLLSRMC-HYQHGHINTY-----LKPM-LQRDFISLLPNFDEKYIVSASGDRTIKVW- 131
V N+ C H GHI+ L P L R + ++ D+ YIVS S D T++VW
Sbjct: 415 VWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEP-DQPYIVSGSRDHTLRVWK 473
Query: 132 ---NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR-YRDEFQIVSSSHDDTILI 187
NT N R + L+ S TI Y D +VS S+D +I I
Sbjct: 474 LPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDI--LVSGSYDSSIRI 531
Query: 188 W 188
W
Sbjct: 532 W 532
Score = 43 (20.2 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 24/90 (26%), Positives = 38/90 (42%)
Query: 30 SVSSASPQLPPMTILYDPNRKKEPAPQFASEK------EMCFKYFDKWSEQDQIDFVENL 83
S+SS S PP + D + P + SE + + F+ E Q L
Sbjct: 156 SISSNSDNFPPSPKV-DTSNTVSPGSKPISEDLEDLNLQSIVQTFEDLPEGIQSYAFFQL 214
Query: 84 LSRMCHYQHGHIN-TYLKPMLQRDFISLLP 112
L R C+ Q + +P+L++D +S LP
Sbjct: 215 L-RSCNRQSMRLLLNECEPLLKKDILSNLP 243
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 294 (108.6 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 79/260 (30%), Positives = 127/260 (48%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
I NW KF+ QR R + + CLQ++D+ +++G D I+V+D ++ + + L+G
Sbjct: 361 ILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG 420
Query: 273 HTGSVLCLQYDER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL---RFSN-GMM 327
H G V L+Y +++SGS+D TVRVWD+ G + H V L + N +
Sbjct: 421 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNIKYI 480
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC 387
VT S+D ++ VW + P E + V D E++ D +
Sbjct: 481 VTGSRDNTLHVWKL--PKESS-------------VPDHGEEH------DYPLVFHTPEEN 519
Query: 388 E-FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 446
FV L GH + + +VVSGS DNT+ +WD+ CL +L GH + + +D
Sbjct: 520 PYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD 579
Query: 447 --AKRIVSGAYDGKIKVWNL 464
KR +S + D I++W+L
Sbjct: 580 HERKRCISASMDTTIRIWDL 599
Score = 204 (76.9 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 79/296 (26%), Positives = 125/296 (42%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178
+VS S DRT++VW+ GH + CL + + Y++ IV+
Sbjct: 436 LVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCL-------------DIVEYKNIKYIVT 482
Query: 179 SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVY 238
S D+T+ +W S P EN + +G + R+ + G
Sbjct: 483 GSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG-- 540
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERV-IISGSSDSTV 296
+ +VSG DNT+ VWD ++C+ +L+GHT + YD ER IS S D+T+
Sbjct: 541 ------NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI 594
Query: 297 RVWDV----NTGEM---VN-------------TLIHHCEAVLHLRFSNGMMVTCSKDRSI 336
R+WD+ N GE N TL H V LR S+ +V+ + D SI
Sbjct: 595 RIWDLENIWNNGECSYATNSASPCAKILGAMYTLQGHTALVGLLRLSDKFLVSAAADGSI 654
Query: 337 AVWDMVSPNEITLRRVLVGHR--AAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFV 390
WD N+ + R+ H +A+ + +VS S + ++N S + V
Sbjct: 655 RGWDA---NDYS-RKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 705
Score = 129 (50.5 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 37/135 (27%), Positives = 72/135 (53%)
Query: 68 FDKWSEQDQI--DFVENLLSRMCHYQHGHI--NTYLKPMLQRDFISLLPNFDEKYIVSAS 123
+ K S+QD++ F+EN+ Y + T L+ + I+ L F++ Y+++ +
Sbjct: 342 YPKLSQQDRLRLSFLENIFILKNWYNPKFVPQRTTLRGHMT-SVITCL-QFEDNYVITGA 399
Query: 124 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDEFQ----IVS 178
D+ I+V+++ + +F+ L+GH G+ L+Y ++VSGS+D T+R D + V
Sbjct: 400 DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVF 459
Query: 179 SSHDDTILIWDFLNY 193
H+ T+ D + Y
Sbjct: 460 KGHNSTVRCLDIVEY 474
Score = 104 (41.7 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 46/214 (21%), Positives = 102/214 (47%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD-STVRVWDVNTGEMVNTLIHH----C- 314
R + ++ ++GH V+ YD +I+ + + + +T + +T+ H C
Sbjct: 527 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI 586
Query: 315 EAVLH--LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV--LVGHRAAVNVVDFDEKYI 370
A + +R + + + + S A + SP L + L GH A V ++ +K++
Sbjct: 587 SASMDTTIRIWDLENIWNNGECSYAT-NSASPCAKILGAMYTLQGHTALVGLLRLSDKFL 645
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ--Y-RDRLVVSGSSDNTIRLWDIECG 427
VSA+ D +I+ W+ + ++ R + H ++ + Y D ++VSGS +N ++++ G
Sbjct: 646 VSAAADGSIRGWDAN--DYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 702
Query: 428 ACLR--VLEGHEELVRCIRFDAKRIVSGAY-DGK 458
+ +L+ ++ + + F K +V+ DG+
Sbjct: 703 KLVHANILKDADQ-IWSVNFKGKTLVAAVEKDGQ 735
Score = 70 (29.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 427 GACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
GA + L+GH LV +R K +VS A DG I+ W+
Sbjct: 623 GA-MYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWD 658
Score = 44 (20.5 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 83 LLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
L++ M + + T +K L+RD I+ LP
Sbjct: 250 LVANMDRSELSDLGTLIKDNLKRDLITSLP 279
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 267 (99.0 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 68/242 (28%), Positives = 127/242 (52%)
Query: 231 SENSKGVYCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVII 288
S ++ V CL++ ++ SG +D T++V++ + ++VL GH V L + + V+
Sbjct: 269 SGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLR 328
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEIT 348
+GS D T + +D E + V ++++ S D ++ +W+ S + +
Sbjct: 329 TGSYDHTGKEYDT-LEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNP-SVTKTS 386
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQ 404
+ R L GH+ +N+V F D +Y SAS D++IK+W+ S +F+ GH + C
Sbjct: 387 ISR-LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWS 445
Query: 405 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
R +VSGS D+T+++WDI+ + L GH + V + + D R+ SG+ D +++W
Sbjct: 446 SDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Query: 463 NL 464
+
Sbjct: 506 TV 507
Score = 258 (95.9 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 70/226 (30%), Positives = 115/226 (50%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTG 304
++ S +D+TI++WD S + + L+GHT SV CL++ E +I SGS D TVRV++ G
Sbjct: 244 RLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDG 303
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+V L H V L + ++ T S D + +D + + RV + V
Sbjct: 304 RLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQ----RVALERYNDVKAK 359
Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYRD--RLVVSGSSDNTIR 420
+ ++S S D T+ +WN S + + L GH++ I + + R S S D +I+
Sbjct: 360 SKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIK 419
Query: 421 LWDIECGACLRVLEGHEELVR--CIRFDAKRIVSGAYDGKIKVWNL 464
LWD + G L GH V C D++ +VSG+ D +K+W++
Sbjct: 420 LWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDI 465
Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 60/205 (29%), Positives = 109/205 (53%)
Query: 265 QCIKVLTGHTGSVL-C-LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
+C ++GHT +VL C D + +S D+TVR+WD+ T +TL H VL + +
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAW 190
Query: 323 S--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI-------VSA 373
S + + T + I +W + + L L GH + + ++ ++ S+
Sbjct: 191 SPDSKKIATAGMEGDIRIWCPQTGKQ--LGSTLKGHTKFITGLSWEPFHLNPKCVRLASS 248
Query: 374 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRV 432
S D TI++W+T SC+ + +L+GH + CL++ + L+ SGS D T+R+++ G +RV
Sbjct: 249 SKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRV 308
Query: 433 LEGHEELVRCIRFDAKRIV-SGAYD 456
L+GH V + + ++ +G+YD
Sbjct: 309 LDGHAHWVNTLALNTDYVLRTGSYD 333
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 66/233 (28%), Positives = 111/233 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D VS D T+++WD + L GHT VL + + D + I + + +R+W
Sbjct: 151 DGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWC 210
Query: 301 VNTGEMV-NTLIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
TG+ + +TL H + + HL + + SKD +I +WD S +
Sbjct: 211 PQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMS--- 267
Query: 353 LVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLV 410
L GH +V + + E I S S DRT++V+NT+ VR L+GH + L D ++
Sbjct: 268 LSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVL 327
Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
+GS D+T + +D A LE + + V+ + ++SG+ D + +WN
Sbjct: 328 RTGSYDHTGKEYDTLEEAQRVALERYND-VKAKSKGMEILISGSDDFTVIMWN 379
Score = 199 (75.1 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 63/229 (27%), Positives = 106/229 (46%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRYRDEF 174
E I S S DRT++V+NT+ VR L+GH + L D ++ +GS D+T + E+
Sbjct: 283 EGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGK---EY 339
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENS 234
+ + + ++ + ++ I N + K + R+ +
Sbjct: 340 DTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTV--IMWNPSVTKTSISRLTGHQQLI 397
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSS 292
V D S D +IK+WD S + + GH G+V +C D R ++SGS
Sbjct: 398 NLV-SFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSK 456
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTC-SKDRSIAVW 339
DST+++WD+ T +M L H + V + +S +G V SKDR + +W
Sbjct: 457 DSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIR 169
+ S+S D TI++W+T SC+ + +L+GH + CL++ + L+ SGS D T+R
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVR 296
Score = 65 (27.9 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 145
D K VS GD T+++W+ + TL GH
Sbjct: 151 DGKGFVSVGGDTTVRIWDIYTSTPTHTLKGH 181
Score = 60 (26.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 115 DEKYIVSASGDRTIKVW-NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
D K I +A + I++W + + TL GH + I L + + + +R
Sbjct: 193 DSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHL----NPKCVR---- 244
Query: 174 FQIVSSSHDDTILIWD 189
+ SSS D TI IWD
Sbjct: 245 --LASSSKDSTIRIWD 258
Score = 45 (20.9 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 177 VSSSHDDTILIWDFLNYSETP 197
VS D T+ IWD Y+ TP
Sbjct: 156 VSVGGDTTVRIWDI--YTSTP 174
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 296 (109.3 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 81/261 (31%), Positives = 132/261 (50%)
Query: 215 NNWRMGKFLLQRI-NCRSE--NSKG-VYCL-QYDDHKIV-SGLRDNTIKVWDR-VSLQCI 267
N +G + Q+I C+ +G V+CL Y ++ SG D TIKVWD + +C
Sbjct: 373 NTGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQ 432
Query: 268 KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM 327
K L GH G VL L + SGS+D T+ VWD+ + VNT+ H V L S+ ++
Sbjct: 433 KTLEGHDGIVLALCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLL 492
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC 387
+ S ++I VWD+V E+ L++ L G V + + Y+ S S +TIK+W+ +
Sbjct: 493 FSGSL-KAIKVWDIVG-TELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTL 549
Query: 388 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445
+ + L + + + +V G+ +N I +WDIE +R L GH V +
Sbjct: 550 DCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVIS 609
Query: 446 --DAKRIVSGAYDGKIKVWNL 464
D ++ S +YD ++VW++
Sbjct: 610 TPDQTKVFSASYDRSLRVWSM 630
Score = 209 (78.6 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 84/296 (28%), Positives = 132/296 (44%)
Query: 141 TLNGHKRGIACL-QYR-DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFLNY 193
T GH+ + CL Y L+ SGSSD TI+ D + Q HD +L
Sbjct: 391 TFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLA------ 444
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
IQ I W + LQ++N + V C H ++
Sbjct: 445 --LCIQGCRLYSGSADCTIIV--WDIQN--LQKVNTIRAHDNPV-CTLVSSHNLLFSGSL 497
Query: 254 NTIKVWDRVS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
IKVWD V L+ K LTG V L + + SGS T+++WD+ T + ++ L
Sbjct: 498 KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQ 556
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DE 367
+V + +N +V + + I VWD+ S ++ R L GH A+ V+ D+
Sbjct: 557 TSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQV---RTLTGHVGTVYALAVISTPDQ 613
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 422
+ SAS DR+++VW+ + +TL H+ + L R RL SG+ D+T+++W
Sbjct: 614 TKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF-SGAVDSTVKVW 668
Score = 206 (77.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 66/233 (28%), Positives = 110/233 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
C+Q ++ SG D TI VWD +LQ + + H V L ++ SGS + ++V
Sbjct: 446 CIQ--GCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKA-IKV 502
Query: 299 WDVNTGEM-----VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
WD+ E+ + L H A++ + + + S ++I +WD+ + + I VL
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVA---AQSYLYSGSY-QTIKIWDIRTLDCI---HVL 555
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRL- 409
+V + +IV + + I VW+ S E VRTL GH +A + D+
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTK 615
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
V S S D ++R+W ++ C + L H+ V + R+ SGA D +KVW
Sbjct: 616 VFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 203 (76.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 75/272 (27%), Positives = 117/272 (43%)
Query: 119 IVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ S S D+TIKVW+T ++ + +TL GH + L + + SGS+D TI D I
Sbjct: 411 LFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCRLYSGSADCTIIVWD---IQ 467
Query: 178 SSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIE--NNWRM-GKFLLQRINCRSENS 234
+ +TI D P+ ++ W + G L + N
Sbjct: 468 NLQKVNTIRAHD------NPVCTLVSSHNLLFSGSLKAIKVWDIVGTELKLKKELTGLNH 521
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
V L + SG TIK+WD +L CI VL GSV + I+ G+ ++
Sbjct: 522 -WVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYEN 579
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ VWD+ + E V TL H V L + + S DRS+ VW M + +
Sbjct: 580 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM---DNMICT 636
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ L+ H+ +V + + S + D T+KVW
Sbjct: 637 QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 37 (18.1 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 2 TILYDPNRKKEPAPQFASEKEMCPYLTI-SVSSASPQLPPMTILYDPNRKKEPAPQFASE 60
++ Y P +++ P ++ + +++ S+ S S T P +EP P +E
Sbjct: 65 SLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSL-PEEDEEPEPLVFAE 123
Query: 61 K 61
+
Sbjct: 124 Q 124
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 278 (102.9 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 85/320 (26%), Positives = 143/320 (44%)
Query: 166 NTIRYRDEFQI-VSSSHDDTILIWDFLN--YSET------PIQXXXXXXXXXXXXXIENN 216
N++++ F + VS+S D TI +WDF + + T +Q +
Sbjct: 110 NSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSAD 169
Query: 217 WRMGKFLLQRINCRSE---NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLT 271
+ + Q +C + V C+++ +++S RD TIKVW+ + CIK L
Sbjct: 170 LTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLV 229
Query: 272 GHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVT 329
GH V + + D I S S+D T++ W++ GE + T H V L FS ++
Sbjct: 230 GHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIID 289
Query: 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF 389
++S E +V G N+V Y+ + S D+TIK+W ++
Sbjct: 290 IPGS-------LLSTPE-GKSKVKQGPGG--NLVG-QCGYLATGSRDKTIKIWELATGRC 338
Query: 390 VRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF- 445
+ T GH + +++ + ++S D TIR+WDI G C++ + E H + C+ F
Sbjct: 339 LATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFC 398
Query: 446 -DAKRIVSGAYDGKIKVWNL 464
I +G D IKVW L
Sbjct: 399 LHNPHIATGGVDDVIKVWKL 418
Score = 259 (96.2 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 61/165 (36%), Positives = 92/165 (55%)
Query: 310 LIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE 367
L H + ++F S +MV+ S+D +I VWD S R L GH AV +DFD+
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGE---FERTLKGHTNAVQDIDFDK 158
Query: 368 --KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLW 422
+ S S D TIK+W+ + + V+TL+GH ++C+++ D+L+ S S D TI++W
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLI-SSSRDKTIKVW 217
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
+ G C++ L GHE+ VR I D I S + D IK WN+V
Sbjct: 218 EAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIV 262
Score = 259 (96.2 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 58/191 (30%), Positives = 101/191 (52%)
Query: 269 VLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SN 324
+LTGH + +++ +++S S D+T++VWD +GE TL H AV + F +
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
++ +CS D +I +WD + + + + L GH V+ V F ++S+S D+TIKVW
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCV---KTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 383 NTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
++ ++TL GH+ + + + + S S+D TI+ W+I G CL H +V
Sbjct: 218 EAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVV 277
Query: 441 RCIRFDAKRIV 451
C+ F I+
Sbjct: 278 ECLAFSTANII 288
Score = 236 (88.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 88/328 (26%), Positives = 140/328 (42%)
Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR 169
P+F +VSAS D TIKVW+ S EF RTL GH + + + L+ S S+D TI+
Sbjct: 116 PSFS--LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIK 173
Query: 170 YRD--EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQ 225
D + V + HD + F TP + W
Sbjct: 174 LWDFQTYDCVKTLHGHDHNVSCVRF-----TPSGDQLISSSRDKTIKV---WEAATGYCI 225
Query: 226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
+ E+ + D I S D TIK W+ V +C+ H+ V CL +
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTA 285
Query: 286 VIIS--GSSDSTVRVWD-VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342
II GS ST V G N L+ C G + T S+D++I +W++
Sbjct: 286 NIIDIPGSLLSTPEGKSKVKQGPGGN-LVGQC----------GYLATGSRDKTIKIWELA 334
Query: 343 SPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRG 399
+ + +GH V V F K+++S D+TI+VW+ + ++T+N H
Sbjct: 335 TGRCLA---TYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHF 391
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIE 425
I+CL + + + +G D+ I++W ++
Sbjct: 392 ISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 233 (87.1 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 55/140 (39%), Positives = 78/140 (55%)
Query: 350 RRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-- 405
+ +L GHR +N V F + +VSAS D TIKVW+ S EF RTL GH + + +
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDK 158
Query: 406 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
L+ S S+D TI+LWD + C++ L GH+ V C+RF +++S + D IKVW
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Query: 464 LVAALDPRAPTTTLCLRTLV 483
AA T C++TLV
Sbjct: 219 --AA-------TGYCIKTLV 229
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 248 (92.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 99 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 215
Query: 442 CI 443
CI
Sbjct: 216 CI 217
Score = 236 (88.1 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 50 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 104
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 105 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 163
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 164 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 205
Score = 202 (76.2 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 117
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 118 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 174
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 175 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 232
Score = 162 (62.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 303
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 304 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 157 (60.3 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 143 (55.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 246 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 344
Score = 140 (54.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 306 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 120 (47.3 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 301
Score = 120 (47.3 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 117
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 118 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 171
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 172 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 230
Query: 294 ST 295
+T
Sbjct: 231 AT 232
Score = 107 (42.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 133 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 190
Query: 166 NTIR 169
T+R
Sbjct: 191 QTVR 194
Score = 96 (38.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 63 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 119
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 152
Score = 95 (38.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 152 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 208
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 209 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 259
Score = 44 (20.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 246 LLSGSRDKTIKMWDV---------STGMCLMTLV 270
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 260 (96.6 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 65/244 (26%), Positives = 124/244 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER---VIISGSSDSTVRVWDVN- 302
IV+G +D T+++W+ S CI V TGH G +L + + ++ +SGS D T++VW ++
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDG 478
Query: 303 ----TGEMVN-----TLIHHCEAVLHLRFSNGMMVTC--SKDRSIAVWDMVSPNEITLRR 351
+ E +N + H + + + + + C S+DR+ ++W + P+ + +
Sbjct: 479 ISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL--PDLVHVV- 535
Query: 352 VLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDR 408
L GH+ + V+F ++ +++ASGD+T+K+W S ++T GH + + D
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 409 L-VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWNLV 465
VS +D ++LW++ C+ + HE+ V + K I +G D I +W+
Sbjct: 596 TQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDS 655
Query: 466 AALD 469
A D
Sbjct: 656 TASD 659
Score = 249 (92.7 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 60/195 (30%), Positives = 96/195 (49%)
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVW--- 339
+I++GS D TVR+W+ + + H +L + F+ V+ S DR++ VW
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
Query: 340 ----DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL 393
D P + R V+ H +N V ++ + + S DRT +W V TL
Sbjct: 478 GISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTL 537
Query: 394 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKR 449
GHKR I +++ D+ V++ S D T+++W I G+CL+ EGH V F D +
Sbjct: 538 KGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQ 597
Query: 450 IVSGAYDGKIKVWNL 464
VS DG +K+WN+
Sbjct: 598 FVSCGADGLLKLWNV 612
Score = 181 (68.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 67/252 (26%), Positives = 116/252 (46%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD 293
G+ C+ D + +N + L K L G+ + +++ DE ++ +++
Sbjct: 324 GLLCVTADQQFFFYSVVENV----EETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATN 379
Query: 294 -STVRVWDVNTGEMVNTLIHHCEAVLHLRF---SNG--MMVTCSKDRSIAVWDMVSPNEI 347
VRV+DV T L H E VL L S+G ++VT SKD+++ +W+ S + I
Sbjct: 380 LEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI 439
Query: 348 TLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTS--SCEFVRTLN-------- 394
V GH + V F +K + VS SGDRT+KVW+ S + +N
Sbjct: 440 G---VGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVA 496
Query: 395 GHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRI 450
H + I + D LV +GS D T +W + + L+GH+ + + F + +
Sbjct: 497 AHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCV 556
Query: 451 VSGAYDGKIKVW 462
++ + D +K+W
Sbjct: 557 MTASGDKTVKIW 568
Score = 168 (64.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 52/237 (21%), Positives = 99/237 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRY----- 170
IV+ S D+T+++WN +S + GH I + + + VSGS D T++
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDG 478
Query: 171 --RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
D + ++ + D + + + + WR+ L+ +
Sbjct: 479 ISEDSEEPINLKTRSVVAAHD-KDINSVAVARNDSLVCTGSEDRTASIWRLPD-LVHVVT 536
Query: 229 CRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE 284
+ + ++ +++ D +++ D T+K+W C+K GHT SVL + D
Sbjct: 537 LKGHKRR-IFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVW 339
+S +D +++W+VNT E + T H + V L M+ T D I +W
Sbjct: 596 TQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/153 (26%), Positives = 78/153 (50%)
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIK 380
S+G + C+ I ++V + +++ + G + + D+K + SA R I+
Sbjct: 29 SDGSFIACACGDVI---NIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIR 85
Query: 381 VWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
VW+ + + +R+ GH+ G+AC L +G+ D + +WD++ G C GH+
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGA-DRKVLVWDVDGGFCTHYFRGHK 144
Query: 438 ELVRCIRF--DAKR--IVSGAYDGKIKVWNLVA 466
+V I F D+ + ++SG+ D ++VW+L A
Sbjct: 145 GVVSSILFHPDSNKNILISGSDDATVRVWDLNA 177
Score = 157 (60.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 46/162 (28%), Positives = 80/162 (49%)
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWN--TSSCEFVR 391
+V + V E+ L + LVG+ + + F +E+++ A+ ++V++ T SC +V
Sbjct: 338 SVVENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYV- 396
Query: 392 TLNGHKRGI----ACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 446
L GHK + C+ L+V+GS D T+RLW+ +C+ V GH + + F
Sbjct: 397 -LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 447 AKRI---VSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVS 485
K VSG+ D +KVW+L + L R++V +
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAA 497
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSD 293
G + + D I D I + D + G + ++ L L D++++ S
Sbjct: 23 GPFIVSSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHS 81
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHL--RFSNGMMVTCSKDRSIAVWDMVSPNEITLRR 351
+RVWD+ T + + + H V+ + S G++ T DR + VWD V T
Sbjct: 82 RQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWD-VDGGFCT--H 138
Query: 352 VLVGHRAAVNVV----DFDEKYIVSASGDRTIKVW--NTSSCE--FVRTLNGHKRGIACL 403
GH+ V+ + D ++ ++S S D T++VW N + E + + H + +
Sbjct: 139 YFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSI 198
Query: 404 QY-RDRLVV-SGSSDNTIRLWDIECGACLRVLEGHEEL 439
D L + S D + LWD+ +C + +E L
Sbjct: 199 ALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVL 236
Score = 73 (30.8 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGS 163
++L P D+K + SA R I+VW+ + + +R+ GH+ G+AC L +G+
Sbjct: 66 LALSP--DDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGA 122
Score = 69 (29.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 115 DEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGI----ACLQYRDR-LVVSGSSDNT 167
+E+++ A+ ++V++ T SC +V L GHK + C+ L+V+GS D T
Sbjct: 370 EEQFLAVATNLEEVRVYDVATMSCSYV--LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKT 427
Query: 168 IR 169
+R
Sbjct: 428 VR 429
Score = 69 (29.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 89 HYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 148
HY GH K ++ I P+ ++ ++S S D T++VW+ ++ N K+
Sbjct: 138 HYFRGH-----KGVVSS--ILFHPDSNKNILISGSDDATVRVWDLNA------KNTEKKC 184
Query: 149 IACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194
+A ++ V S + D + S+ D + +WD +YS
Sbjct: 185 LAIMEKHFSAVTSIALSE-----DGLTLFSAGRDKVVNLWDLHDYS 225
Score = 67 (28.6 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRYRD 172
+ +A DR + VW+ GHK ++ + + +++SGS D T+R D
Sbjct: 117 LATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Score = 37 (18.1 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 160 VSGSSDNTIRYR---DEFQIVSSSHDDTILIWD 189
+ G SD D+ + S+ H I +WD
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWD 88
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 279 (103.3 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 99/367 (26%), Positives = 176/367 (47%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+S P D K + S SGD T+++W+ + + T GHK + + + + +VSGS
Sbjct: 115 VSFSP--DGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKS 172
Query: 166 NTIR-YRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLL 224
I + + + S W S P+ + + R+ L
Sbjct: 173 GEICCWNPKKGELEGSPLTGHKKW-ITGISWEPVHLSSPCRRFVTSSK-DGDARIWDITL 230
Query: 225 QR-INCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
++ I C S ++ V C+++ D I +G +D TIK+W+ + I+ L GH + L
Sbjct: 231 KKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLAL 290
Query: 283 D-ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM 341
E V+ +G+ D T R + N E L + + S +V+ S D ++ +W+
Sbjct: 291 STEYVLRTGAFDHTGRQYPPNE-EKQKALERYNKTKGD---SPERLVSGSDDFTMFLWEP 346
Query: 342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
S ++ +R L GH+ VN V F D K+I SAS D+++++WN + +FV GH
Sbjct: 347 -SVSKQPKKR-LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGP 404
Query: 400 IACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455
+ + + RL++SGS D+T+++W+I + L GH + V + + D +++VSG
Sbjct: 405 VYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGK 464
Query: 456 DGKIKVW 462
D +K+W
Sbjct: 465 DRVLKLW 471
Score = 224 (83.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 56/206 (27%), Positives = 110/206 (53%)
Query: 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
+C + + GH +VLC+ + D + + SGS D+TVR+WD+ T + T H VL + +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 323 S-NGM-MVTCSKDRSIAVWDMVSPNEITLR-RVLVGHRAAVNVVDFDEKYI-------VS 372
S +G +V+ SK I W+ P + L L GH+ + + ++ ++ V+
Sbjct: 160 SPDGKHLVSGSKSGEICCWN---PKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVT 216
Query: 373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLR 431
+S D ++W+ + + + L+GH + C+++ D ++ +GS D TI++W+ G +R
Sbjct: 217 SSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIR 276
Query: 432 VLEGHEELVRCIRFDAKRIV-SGAYD 456
L+GH + + + ++ +GA+D
Sbjct: 277 ELKGHGHWINSLALSTEYVLRTGAFD 302
Score = 203 (76.5 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 58/226 (25%), Positives = 115/226 (50%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTG 304
+ V+ +D ++WD + I L+GHT +V C+++ + +I +GS D T+++W+ G
Sbjct: 213 RFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQG 272
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+++ L H + L S ++ T + D + + PNE ++ L +
Sbjct: 273 KLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYP---PNE-EKQKALERYNKTKG-- 326
Query: 364 DFDEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIR 420
D E+ +VS S D T+ +W S S + + L GH++ + + + + + S S D ++R
Sbjct: 327 DSPER-LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Query: 421 LWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
LW+ G + V GH V + + D++ ++SG+ D +K+W +
Sbjct: 386 LWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
Score = 195 (73.7 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 68/258 (26%), Positives = 118/258 (45%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII 288
+++ V C+ + D ++ SG D T+++WD + + GH VL + + D + ++
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLV 167
Query: 289 SGSSDSTVRVWDVNTGEMVNT-LIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWD 340
SGS + W+ GE+ + L H + + +HL VT SKD +WD
Sbjct: 168 SGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWD 227
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
+ I L GH AV V + + I + S D TIK+W T+ + +R L GH
Sbjct: 228 ITLKKSIIC---LSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHW 284
Query: 400 IACLQYRDRLVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDG 457
I L V+ +G+ D+T R + + LE + + + D+ +R+VSG+ D
Sbjct: 285 INSLALSTEYVLRTGAFDHTGRQYPPN-EEKQKALERYNKT----KGDSPERLVSGSDDF 339
Query: 458 KIKVWNLVAALDPRAPTT 475
+ +W + P+ T
Sbjct: 340 TMFLWEPSVSKQPKKRLT 357
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RL 409
V VG N V ++ + ++ + C +T+ GH + C+ + +
Sbjct: 66 VPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCS--QTIAGHAEAVLCVSFSPDGKQ 123
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
+ SGS D T+RLWD+ L +GH+ V + + D K +VSG+ G+I WN
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 351 RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD- 407
+ + GH AV V F D K + S SGD T+++W+ + + T GHK + + +
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 408 -RLVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGK 458
+ +VSGS I W+ + G L GH++ + I ++ +R V+ + DG
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 459 IKVWNL 464
++W++
Sbjct: 223 ARIWDI 228
Score = 57 (25.1 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 140 RTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
+T+ GH + C+ + + + SGS D T+R D
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 261 (96.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 73/239 (30%), Positives = 116/239 (48%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCI------KVLTGHTGSV--LCLQYDERVIISGSSDS 294
D I+S RD T+ VW + K L GH+ + + L D +SGS D
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQ 86
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
T+R+WD+ G+ H + VL + FS N +V+ S+D++I +W+ ++ + T++
Sbjct: 87 TLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQED 146
Query: 353 LVGHRAAVNVVDFDEKY----IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD- 407
GH V+ V F + IVS DRT+KVWN ++C+ +GH + +
Sbjct: 147 --GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPD 204
Query: 408 -RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNL 464
L SG D+ LWD+ G L LE H +++ + F R + AY IK+W+L
Sbjct: 205 GSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGPSIKIWDL 262
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 48/133 (36%), Positives = 68/133 (51%)
Query: 347 ITLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFV------RTLNGHK 397
+ LR L+GH V + + K I+SAS D+T+ VW + E + L GH
Sbjct: 5 LQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHS 64
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSG 453
I+ L +SGS D T+RLWD+ G R EGH + V + F A ++IVSG
Sbjct: 65 HFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSG 124
Query: 454 AYDGKIKVWNLVA 466
+ D IK+WN +A
Sbjct: 125 SRDKTIKLWNTLA 137
Score = 155 (59.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQYDER----VIISGSSDSTV 296
D+ +IVSG RD TIK+W+ ++ +C + GHT V C+++ +I+S D TV
Sbjct: 117 DNRQIVSGSRDKTIKLWNTLA-ECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTV 175
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVS-PNEITLRRVL 353
+VW++ ++ N H + + S +G + T KD +WD+ N TL
Sbjct: 176 KVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE--- 232
Query: 354 VGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQY 405
H +N + F +Y + + +IK+W+ + + V L CL
Sbjct: 233 --HNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSL 290
Query: 406 R---D-RLVVSGSSDNTIRLWDIECGA 428
D + + +G SDNTIR+W + A
Sbjct: 291 AWSTDGQTLFAGYSDNTIRVWQVSVSA 317
Score = 137 (53.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 50/202 (24%), Positives = 92/202 (45%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSI 336
D R I+SGS D T+++W+ E T+ H + V +RFS N ++V+C DR++
Sbjct: 117 DNRQIVSGSRDKTIKLWNT-LAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTV 175
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIK--VWNTSSCEFVRTLN 394
VW++ + L+ GH +N V + SG + K +W+ + + + TL
Sbjct: 176 KVWNLAN---CKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE 232
Query: 395 GHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLE-------GHEELVRCIRF- 445
H I L + +R + + +I++WD+ C + L + +C+
Sbjct: 233 -HNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLA 291
Query: 446 ---DAKRIVSGAYDGKIKVWNL 464
D + + +G D I+VW +
Sbjct: 292 WSTDGQTLFAGYSDNTIRVWQV 313
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFV------RTLNGHKRGIA--CLQYRDRLVVSGSSDN 166
D I+SAS D+T+ VW + E + L GH I+ L +SGS D
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQ 86
Query: 167 TIRYRD 172
T+R D
Sbjct: 87 TLRLWD 92
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSET 196
+D I+S+S D T+++W +T
Sbjct: 26 KDPDTIISASRDKTLIVWKLTRDEDT 51
>UNIPROTKB|E5RGC1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR001810 InterPro:IPR021977
Pfam:PF12125 PROSITE:PS50181 SMART:SM00256 SMART:SM01028
SUPFAM:SSF81383 EMBL:AC011410 HGNC:HGNC:13607 EMBL:AC011387
EMBL:AC113342 IPI:IPI00973949 ProteinModelPortal:E5RGC1 SMR:E5RGC1
Ensembl:ENST00000517395 ArrayExpress:E5RGC1 Bgee:E5RGC1
Uniprot:E5RGC1
Length = 197
Score = 261 (96.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 81 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 140
Query: 108 ISLLP 112
I+ LP
Sbjct: 141 ITALP 145
>UNIPROTKB|I3LGM0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR001810
InterPro:IPR021977 Pfam:PF12125 PROSITE:PS50181 SMART:SM00256
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 SUPFAM:SSF81383
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0000209
GO:GO:0031648 GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 EMBL:CU571054
Ensembl:ENSSSCT00000032458 OMA:IELMXIS Uniprot:I3LGM0
Length = 188
Score = 261 (96.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 48 NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
+RK+ + EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 28 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 87
Query: 108 ISLLP 112
I+ LP
Sbjct: 88 ITALP 92
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 259 (96.2 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 63/226 (27%), Positives = 110/226 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ S RD T+++W V HT SV + + D + +++ S D +V+VW V
Sbjct: 75 VASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERK 134
Query: 305 EMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ + +L H V RFS +G ++ +C DR++ +WD S I + + +
Sbjct: 135 KFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCIN---IFTDYGGSATF 191
Query: 363 VDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT 418
VDF+ I S+ D TIK+W+ + + ++ H G+ C + ++SGSSD+T
Sbjct: 192 VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDST 251
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
I++ D+ G + L GH+ V + F D SG D ++ +W
Sbjct: 252 IKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 229 (85.7 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 51/203 (25%), Positives = 98/203 (48%)
Query: 272 GHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMM 327
GH + C ++ + + +GS D ++ +W++ + H + + + F S ++
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+D+++ +W E T V H A+V V F D + +V+AS D+++KVW
Sbjct: 76 ASSSRDQTVRLWTPSIKGEST---VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE 132
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+F+ +LN H + C ++ RL+ S D T+RLWD C+ + + +
Sbjct: 133 RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFV 192
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F++ I S D IK+W++
Sbjct: 193 DFNSSGTCIASSGADNTIKIWDI 215
Score = 210 (79.0 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 62/244 (25%), Positives = 114/244 (46%)
Query: 237 VYCLQYDDH--KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS 292
+ C ++ + ++ +G D ++ +W+ GHT + + + ++ S S
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSR 80
Query: 293 DSTVRVWDVNT-GEMVNTLIH-HCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEI- 347
D TVR+W + GE +T+ H +V + FS +G +VT S D+S+ VW + +
Sbjct: 81 DQTVRLWTPSIKGE--STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLY 138
Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+L R H V F D + I S DRT+++W+TSS + + + + +
Sbjct: 139 SLNR----HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDF 194
Query: 406 RDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV 461
+ S +DNTI++WDI ++ + H V C F ++SG+ D IK+
Sbjct: 195 NSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKI 254
Query: 462 WNLV 465
+L+
Sbjct: 255 LDLL 258
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D + +V+AS D+++KVW +F+ +LN H + C ++ RL+ S D T+R D
Sbjct: 113 DGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR-INCRS 231
+SSH + D+ S T + +N ++ + I
Sbjct: 173 -----TSSHQCINIFTDY-GGSATFVDFNSSGTCIASSGA-DNTIKIWDIRTNKLIQHYK 225
Query: 232 ENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVI 287
++ GV C + + ++SG D+TIK+ D + + I L GH G VL + + D +
Sbjct: 226 VHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLF 285
Query: 288 ISGSSDSTVRVWDVN 302
SG +DS V +W N
Sbjct: 286 ASGGADSQVLMWKTN 300
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 348 TLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
TL R GH+ ++ DF+ K + + S D+++ +WN + GH I + +
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 406 RDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV 461
LV S S D T+RLW V + H VR + F D +R+V+ + D +KV
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 462 WNL 464
W +
Sbjct: 129 WGV 131
Score = 140 (54.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 39/161 (24%), Positives = 74/161 (45%)
Query: 231 SENSKGVYCLQYD-DHKIVSGLRDN-TIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--V 286
+ ++ V C ++ D ++++ D+ T+++WD S QCI + T + GS + ++
Sbjct: 141 NRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTC 200
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE 346
I S +D+T+++WD+ T +++ H V F S + ++ E
Sbjct: 201 IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTI-KILDLLE 259
Query: 347 ITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTS 385
L L GH+ V V F + ASG D + +W T+
Sbjct: 260 GRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTN 300
Score = 135 (52.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
I S DNTIK+WD + + I+ H V C + +ISGSSDST+++ D+ G
Sbjct: 201 IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
++ TL H VL + FS +G + + D + +W + + + R +L H V
Sbjct: 261 RLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK-TNFDSLNYRELLSKHSKRV 317
Score = 62 (26.9 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 105 RDFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVS 161
+D IS N + K + + S D+++ +WN + GH I + + LV S
Sbjct: 18 KDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVAS 77
Query: 162 GSSDNTIR 169
S D T+R
Sbjct: 78 SSRDQTVR 85
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIR 169
+ S+S D+T+++W S H + + + RD + +V+ S D +++
Sbjct: 75 VASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVK 127
Score = 43 (20.2 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 140 RTLNGHKRGIACLQYR--DRLVVSGSSDNTI 168
R GHK I+C + ++ + +GS D ++
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSL 42
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 283 (104.7 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 72/257 (28%), Positives = 128/257 (49%)
Query: 216 NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275
N + + LQ I S N + + + +G D + +W CI LTGHT
Sbjct: 5 NTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTS 64
Query: 276 SVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCS 331
+V C+Q++ E +++GS ++R+WD+ +++ TL+ H ++ L F + + S
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGS 124
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389
D +I +WD V R GH AV + F D K++ SAS D T+K+W+ + +
Sbjct: 125 VDSNIKLWD-VRRKGCVFR--YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM 181
Query: 390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445
+ H + +Q+ + L+ SGS+D T++LWD+E + EG +VR + F
Sbjct: 182 ITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP 241
Query: 446 DAKRIVSGAYDGKIKVW 462
D + SG+ + ++V+
Sbjct: 242 DGSCLYSGS-ENTLRVY 257
Score = 246 (91.7 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 65/260 (25%), Positives = 127/260 (48%)
Query: 218 RMGKFLLQRINC---RSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
R+ + + + NC + ++ V C+Q++ + ++V+G ++++WD + + ++ L G
Sbjct: 44 RVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMG 103
Query: 273 HTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-MV 328
H S+ L + + SGS DS +++WDV V H +AV L FS +G +
Sbjct: 104 HKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLA 163
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS 386
+ S D ++ +WD+++ IT H +AVNVV F +E + S S DRT+K+W+
Sbjct: 164 SASDDSTVKLWDLIAGKMIT---EFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEK 220
Query: 387 CEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445
+ + G + + + D + S+NT+R++ E C V+ V +
Sbjct: 221 FNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAI 280
Query: 446 DAKRIVSGAYDGKIKVWNLV 465
++++ +Y W +V
Sbjct: 281 SNNQMIAVSYSHTNVSWYVV 300
Score = 245 (91.3 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 60/222 (27%), Positives = 110/222 (49%)
Query: 251 LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
L + TI W LQ I + + S++ + R++ +G D V +W V+ + +L
Sbjct: 3 LTNTTITSW---KLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSL 59
Query: 311 IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE- 367
H AV ++F++ +V S S+ +WD+ + + R L+GH+A+++ +DF
Sbjct: 60 TGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAK---ILRTLMGHKASISSLDFHPM 116
Query: 368 -KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 424
+Y+ S S D IK+W+ V GH + + CL + + + S S D+T++LWD+
Sbjct: 117 GEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Query: 425 ECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
G + H V ++F + SG+ D +K+W+L
Sbjct: 177 IAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 231 (86.4 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 54/181 (29%), Positives = 98/181 (54%)
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR 351
+++T+ W + E+V + VL + S ++ T +D + +W + PN I
Sbjct: 4 TNTTITSWKLQ--EIVAHSSNVSSLVLG-KSSGRLLATGGEDCRVNIWAVSKPNCIMS-- 58
Query: 352 VLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-- 407
L GH +AV + F+ E+ +V+ S ++++W+ + + +RTL GHK I+ L +
Sbjct: 59 -LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG 117
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
+ SGS D+ I+LWD+ C+ +GH + VRC+ F D K + S + D +K+W+L+
Sbjct: 118 EYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 466 A 466
A
Sbjct: 178 A 178
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 55/237 (23%), Positives = 112/237 (47%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W S + +L GH + C+Q+ + VV+GS ++R D
Sbjct: 34 RLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC- 229
+I+ + H +I DF E +++N ++ ++R C
Sbjct: 94 AAKILRTLMGHKASISSLDFHPMGE-----------YLASGSVDSNIKLWD--VRRKGCV 140
Query: 230 -RSE-NSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--D 283
R + +++ V CL + D K + S D+T+K+WD ++ + I T HT +V +Q+ +
Sbjct: 141 FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPN 200
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVW 339
E ++ SGS+D TV++WD+ M+ + V + F+ +G + + ++ V+
Sbjct: 201 EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 55/247 (22%), Positives = 102/247 (41%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRY 170
N E+ +V+ S ++++W+ + + +RTL GHK I+ L + + SGS D+ I+
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 171 RDEFQ----IVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRM--GKFLL 224
D + H + F +P + W + GK +
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLAF-----SPDGKWLASASDDSTVKL---WDLIAGKMIT 183
Query: 225 QRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
+ + ++ V +Q+ +++ + SG D T+K+WD I G TG V + +
Sbjct: 184 EF----TSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLF 239
Query: 283 --DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
D + SGS ++T+RV+ + + V L SN M+ S + W
Sbjct: 240 NPDGSCLYSGS-ENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWY 298
Query: 341 MVSPNEI 347
+V N +
Sbjct: 299 VVDLNRV 305
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 251 (93.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 62/182 (34%), Positives = 99/182 (54%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G- 325
L+GH V + + VI+S S D+T++VWD TG+ TL H ++V + F + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
++ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/163 (34%), Positives = 88/163 (53%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS ++V+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VIVSASEDATIKVWDHETGD---FERTLKGHTDSVQDISFDHTGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVATGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW-VVATKECKA 270
Score = 206 (77.6 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 51/165 (30%), Positives = 88/165 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
IVS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
V + D I S+S D+T++VW ++ E L H+ + C+ +
Sbjct: 240 VRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 152 (58.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRLWDIE 425
+++S S D+TIK+W+ S + TL GH RG+ + + +VS + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVL-VHPGGKYIVSCADDKTLRIWDYK 368
Query: 426 CGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C + L HE V + F A +V+G+ D +KVW
Sbjct: 369 NKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 147 (56.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 32/100 (32%), Positives = 56/100 (56%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+ G + TL+ H V + G +V+C+ D+++ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
+ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 371 R---CTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 145 (56.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 52/181 (28%), Positives = 81/181 (44%)
Query: 142 LNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSE 195
L+GH+ + + + ++VS S D TI+ D +F+ H D++ D +++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQ--D-ISFDH 160
Query: 196 TPIQXXXXXXXXXXXXXIENNWRMGKF-LLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254
T I+ W F ++ ++ N V + DH IVS RD
Sbjct: 161 T----GKLLASCSADMTIKL-WDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDK 214
Query: 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQ--YDERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
TIK+W+ + C+K TGH V ++ D +I S S+D TVRVW V T E L
Sbjct: 215 TIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE 274
Query: 313 H 313
H
Sbjct: 275 H 275
Score = 139 (54.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 247 IVSGLRDNTIKVWDRVSL-QCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNT 303
++SG RD TIK+WD VS+ C+ L GH V + + + I+S + D T+R+WD
Sbjct: 311 LLSGSRDKTIKMWD-VSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 304 GEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
TL H V L F +VT S D+++ VW+
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 136 (52.9 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 34/104 (32%), Positives = 59/104 (56%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V +V KYIVS + D+T+++W+
Sbjct: 311 LLSGSRDKTIKMWD-VSIGMCLM--TLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ +TL+ H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 122 (48.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 46/169 (27%), Positives = 70/169 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
IVSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
+ V Q D I S D T++VW + +C L H V C+ +
Sbjct: 237 VRMVRPNQ-DGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 116 (45.9 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDAKRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + K IVS A D +++W+
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Score = 111 (44.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W ++ V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 97 (39.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 105 RDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR------ 157
R+++ ++ PN D I S+S D+T++VW ++ E L H+ + C+ +
Sbjct: 234 REWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 158 LVVSGSSDNTIRYRDEFQIVSSSHDDTILIWD 189
L +GS F ++S S D TI +WD
Sbjct: 294 LEATGSETKKSGKPGPF-LLSGSRDKTIKMWD 324
Score = 94 (38.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 113 NFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNT 167
+FD K + S S D TIK+W+ E +RT++GH + A + D +VS S D T
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKT 215
Query: 168 IR 169
I+
Sbjct: 216 IK 217
Score = 38 (18.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 450 IVSGAYDGKIKVWNL 464
++SG+ D IK+W++
Sbjct: 311 LLSGSRDKTIKMWDV 325
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 248 (92.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 202 (76.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 247 (92.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 61/182 (33%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVEDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 201 (75.8 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVEDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 44 (20.5 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 246 (91.7 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 61/182 (33%), Positives = 98/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G- 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 236 (88.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHTGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 200 (75.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEAT 297
Score = 162 (62.1 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 34/100 (34%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WD++TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 142 (55.0 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 34/104 (32%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD +S + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-ISTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 121 (47.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WDI G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 118 (46.6 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 107 (42.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 96 (38.9 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHTGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIK 217
Score = 93 (37.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 45 (20.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDI---------STGMCLMTLV 335
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 245 (91.3 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 60/182 (32%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNG 325
L+GH V + + V++S S D+T++VWD TG+ TL H ++V + F S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSA+ D+TIK+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 233 (87.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 56/163 (34%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD K + S S
Sbjct: 115 IFHPVFS--VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS + D TI++W+++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSAARDKTIKMWEVQTGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 270
Score = 199 (75.1 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 52/178 (29%), Positives = 91/178 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ ++D++I +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418
V + D I S S D+T++VW ++ E L H+ + C+ + S S+ T
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Score = 162 (62.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WDV+TG + TL+ H V + F +G +++C+ D+++ VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 157 (60.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 143 (55.4 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD VS + LVGH V V F K+I+S + D+T++VW+
Sbjct: 311 LLSGSRDKTIKMWD-VSTGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
+ ++TLN H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 409
Score = 140 (54.3 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + + I+S + D T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
+ TL H V L F +VT S D+++ VW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWN 463
++SGS D TI++WD+ G CL L GH+ VR + F + K I+S A D ++VW+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 120 (47.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 48/182 (26%), Positives = 75/182 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V Q D I S D T++VW + +C L H V C+ + S S+
Sbjct: 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 294 ST 295
+T
Sbjct: 296 AT 297
Score = 104 (41.7 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSA+ D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 95 (38.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 86 RMCHYQHGH-INTYLKPMLQRDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143
+M Q G+ + T+ R+++ ++ PN D I S S D+T++VW ++ E L
Sbjct: 217 KMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ-----IVSSSHDDTILIWD 189
H+ + C+ + S S+ T + ++S S D TI +WD
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 93 (37.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYETGDFERTLKG--HTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS + D TI+
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSAARDKTIK 217
Score = 44 (20.5 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDV---------STGMCLMTLV 335
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 276 (102.2 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 75/250 (30%), Positives = 122/250 (48%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +++ + L+ SGSSD TIR WD+E + +EG VR I F D + SG
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSG 249
Query: 454 AYDG-KIKVW 462
D ++ W
Sbjct: 250 CQDSLRVYGW 259
Score = 232 (86.7 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 232 (86.7 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 155 (59.6 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL 310
+ SGSSD T+R WD+ ++V+ +
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
>UNIPROTKB|Q5T1W7 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0071407 "cellular
response to organic cyclic compound" evidence=IEA]
InterPro:IPR001810 InterPro:IPR021977 Pfam:PF12125 SMART:SM01028
GO:GO:0045893 GO:GO:0006470 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0030163 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0043122 GO:GO:0060444 GO:GO:0033598 GO:GO:0042753
EMBL:AL627424 EMBL:AL133387 EMBL:AL445463 UniGene:Hs.643802
UniGene:Hs.713753 HGNC:HGNC:1144 ChiTaRS:BTRC IPI:IPI00641852
SMR:Q5T1W7 Ensembl:ENST00000370183 Uniprot:Q5T1W7
Length = 191
Score = 253 (94.1 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 47 PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
P ++K A + EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRD
Sbjct: 103 PKQRKLSA-SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRD 161
Query: 107 FISLLP 112
FI+ LP
Sbjct: 162 FITALP 167
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 275 (101.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 74/250 (29%), Positives = 122/250 (48%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +++ + L+ SGSSD TIR WD+E + +EG VR + F D + SG
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 454 AYDG-KIKVW 462
D ++ W
Sbjct: 250 CQDSLRVYGW 259
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL 310
+ SGSSD T+R WD+ ++V+ +
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 275 (101.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 74/250 (29%), Positives = 122/250 (48%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +++ + L+ SGSSD TIR WD+E + +EG VR + F D + SG
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 454 AYDG-KIKVW 462
D ++ W
Sbjct: 250 CQDSLRVYGW 259
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL 310
+ SGSSD T+R WD+ ++V+ +
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 275 (101.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 74/250 (29%), Positives = 122/250 (48%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +++ + L+ SGSSD TIR WD+E + +EG VR + F D + SG
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 454 AYDG-KIKVW 462
D ++ W
Sbjct: 250 CQDSLRVYGW 259
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL 310
+ SGSSD T+R WD+ ++V+ +
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 233 (87.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 58/182 (31%), Positives = 97/182 (53%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G- 325
L+GH V + + +++S S D+T++VWD G+ TL H ++V + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
++ +CS D +I +WD I R + GH V+ V + +IVSAS D+T+K+W
Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 384 TSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
++ V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 442 CI 443
CI
Sbjct: 281 CI 282
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 55/163 (33%), Positives = 89/163 (54%)
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSAS 374
+ H FS +MV+ S+D +I VWD + + R L GH +V + FD+ K + S S
Sbjct: 115 IFHPVFS--LMVSASEDATIKVWDYEAGD---FERTLKGHTDSVQDISFDQTGKLLASCS 169
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
D TIK+W+ E +RT++GH + A + D +VS S D T+++W++ G C++
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTMKMWEVATGYCVK 228
Query: 432 VLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D + S + D ++VW +VA + +A
Sbjct: 229 TFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW-VVATKECKA 270
Score = 197 (74.4 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 48/165 (29%), Positives = 88/165 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TIKVWD + + L GHT SV + +D+ +++ S S+D T+++WD
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E + T+ H V + NG +V+ S+D+++ +W++ + + + GHR V +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
V + D + S S D+T++VW ++ E L H+ + C+ +
Sbjct: 240 VRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 161 (61.7 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 34/100 (34%), Positives = 60/100 (60%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
++SGS D T+++WD++TG + TL+ H V + F G +V+C+ D+++ +WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY--K 368
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H V +DF + Y+V+ S D+T+KVW
Sbjct: 369 NKRCMK-TLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 160 (61.4 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+++S S D+TIK+W+ S+ + TL GH + + + R VVS + D T+R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 427 GACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F + +V+G+ D +KVW
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 145 (56.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
++SG RD TIK+WD + C+ L GH V + + R ++S + D T+R+WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 305 EMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
+ TL H V L F ++ +VT S D+++ VW+
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 140 (54.3 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 142 LNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSE 195
L+GH+ + + + L+VS S D TI+ D +F+ H D++ D +++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQ--D-ISFDQ 160
Query: 196 TPIQXXXXXXXXXXXXXIENNWRMGKF-LLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254
T I+ W F ++ ++ N V + DH IVS RD
Sbjct: 161 T----GKLLASCSADMTIKL-WDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDK 214
Query: 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQ--YDERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
T+K+W+ + C+K TGH V ++ D ++ S S+D TVRVW V T E L
Sbjct: 215 TMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELRE 274
Query: 313 H 313
H
Sbjct: 275 H 275
Score = 134 (52.2 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 31/104 (29%), Positives = 60/104 (57%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNT 384
+++ S+D++I +WD +S + LVGH V V F +++VS + D+T+++W+
Sbjct: 311 LLSGSRDKTIKMWD-ISTGMCLM--TLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 385 SSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIEC 426
+ ++TL+ H+ + L + VV+GS D T+++W EC
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW--EC 409
Score = 118 (46.6 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVWN 463
++SGS D TI++WDI G CL L GH+ VR + F + +VS A D +++W+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 393 LNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AK 448
L+GH+ + + + L+VS S D TI++WD E G R L+GH + V+ I FD K
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 449 RIVSGAYDGKIKVWN 463
+ S + D IK+W+
Sbjct: 164 LLASCSADMTIKLWD 178
Score = 115 (45.5 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 44/169 (26%), Positives = 70/169 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD--EF 174
+VSAS D TIKVW+ + +F RTL GH + + + +L+ S S+D TI+ D F
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSEN 233
+ + + H D N S I W + + ++ E
Sbjct: 183 ECIRTMHGH-----DH-NVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREW 236
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
+ V Q D + S D T++VW + +C L H V C+ +
Sbjct: 237 VRMVRPNQ-DGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 103 (41.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+T+K+W ++ V+T GH+ + ++ +D L+ S S+D
Sbjct: 198 VAIMPNGD--HIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSND 255
Query: 166 NTIR 169
T+R
Sbjct: 256 QTVR 259
Score = 95 (38.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 81 ENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEF 138
E+ ++ Y+ G LK D + + +FD+ K + S S D TIK+W+ E
Sbjct: 128 EDATIKVWDYEAGDFERTLKG--HTDSVQDI-SFDQTGKLLASCSADMTIKLWDFQGFEC 184
Query: 139 VRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIR 169
+RT++GH + A + D +VS S D T++
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTMK 217
Score = 92 (37.4 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 105 RDFISLL-PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV---- 159
R+++ ++ PN D + S S D+T++VW ++ E L H+ + C+ +
Sbjct: 234 REWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 160 --VSGSSDNTIRYRDEFQIVSSSHDDTILIWD 189
+GS + F ++S S D TI +WD
Sbjct: 294 SEATGSENKKSGKPGPF-LLSGSRDKTIKMWD 324
Score = 45 (20.9 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 450 IVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
++SG+ D IK+W++ +T +CL TLV
Sbjct: 311 LLSGSRDKTIKMWDI---------STGMCLMTLV 335
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 265 (98.3 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 69/240 (28%), Positives = 117/240 (48%)
Query: 241 QYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
Q D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR
Sbjct: 269 QAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVR 328
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+W + T + H V +FS G V+ DR +W + + R+ G
Sbjct: 329 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAG 385
Query: 356 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV 411
H A VN F + Y+ + S DRT+++W+ + VR GHK I L + R +
Sbjct: 386 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 445
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+G++D + LWDI G + L+GH + V +RF D + + SG+ D +++W+ V A +
Sbjct: 446 TGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 505
Score = 220 (82.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 65/248 (26%), Positives = 114/248 (45%)
Query: 243 DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
DD +++G D+T++VW S+ K+ + + L L I S D R+ D
Sbjct: 240 DDSSLIAGGFADSTVRVW---SVTPKKLRSVKQAADLSL------IDKESDDVLERIMDE 290
Query: 302 NTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + L H V FS +++ S+D ++ +W + + T GH
Sbjct: 291 KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHNYP 347
Query: 360 VNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 415
V F Y VS DR ++W T + +R GH + C ++ V +GS+
Sbjct: 348 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA 407
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL---DP 470
D T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++ L +
Sbjct: 408 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 467
Query: 471 RAPTTTLC 478
+ T T+C
Sbjct: 468 KGHTDTVC 475
Score = 182 (69.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 56/242 (23%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 272 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 331
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 332 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 383
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C ++ + + + +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 443
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + V LRFS +G ++ + S D ++ +WD V
Sbjct: 444 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 503
Query: 345 NE 346
E
Sbjct: 504 FE 505
Score = 47 (21.6 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 46 DPN---RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
DPN + + P P+ + + K + ++ + L +C Y +N Y + +
Sbjct: 177 DPNAPPQNRIPLPEL-KDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTF--LNAYQQGL 233
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
D D I D T++VW+ +
Sbjct: 234 TAVDVTD-----DSSLIAGGFADSTVRVWSVT 260
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 241 (89.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 71/225 (31%), Positives = 108/225 (48%)
Query: 270 LTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NG 325
LTGH+ V + L D + +SGS D +R+WD++TG + H + VL + FS N
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVL---VGHRAAVNVVDFD----EKYIVSASGDRT 378
+V+ S+DR+I +W+ + + T+ L GH V+ V F + IVS S DRT
Sbjct: 131 QIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRT 190
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGH 436
+KVWN ++C+ L GH + + L SG D LWD+ G L L+
Sbjct: 191 VKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDAG 250
Query: 437 EELVRCIRFDAKRI-VSGAYDGKIKVWNL-----VAALDPRAPTT 475
++ + F R + A IK+W+L V L P P +
Sbjct: 251 S-IIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLKPEIPVS 294
Score = 162 (62.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 77/314 (24%), Positives = 135/314 (42%)
Query: 176 IVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSK 235
IVSSS D ++L+WD N P+Q F +R+ S +
Sbjct: 34 IVSSSRDKSLLVWDLTN----PVQNVGEGAGASEYGV--------PF--RRLTGHSHFVQ 79
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD 293
V L D +SG D +++WD + + GH VL + + D R I+S S D
Sbjct: 80 DVV-LSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRD 138
Query: 294 STVRVWDVNTGEMVNTL-------IHHCEAVLHLRFSNGM----MVTCSKDRSIAVWDMV 342
T+++W+ GE T+ H V +RFS +V+ S DR++ VW++
Sbjct: 139 RTIKLWNT-LGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLT 197
Query: 343 SPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLN-GHKRG 399
+ LR L GH VN V + ASG D +W+ + + + +L+ G
Sbjct: 198 N---CKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDAGSIIH 254
Query: 400 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE-----GHEELVRCIRF----DAKRI 450
C +R + ++ ++I++WD+E ++ L+ +++ C D +
Sbjct: 255 SLCFS-PNRYWLCAATQDSIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTL 313
Query: 451 VSGAYDGKIKVWNL 464
+G DG I+++ +
Sbjct: 314 YAGYTDGTIRIYKI 327
Score = 45 (20.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 112 PNFDEKYIVSASGDRTIKVWNTSS 135
P + +IVS+S D+++ VW+ ++
Sbjct: 27 PIDNSPFIVSSSRDKSLLVWDLTN 50
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 275 (101.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 74/250 (29%), Positives = 122/250 (48%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +++ + L+ SGSSD TIR WD+E + +EG VR + F D + SG
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 454 AYDG-KIKVW 462
D ++ W
Sbjct: 250 CQDSLRVYGW 259
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 232 (86.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 155 (59.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL 310
+ SGSSD T+R WD+ ++V+ +
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 447 AKRIV--SGAYDGKIKVWNLVAALDPRAPTTT 476
AK + S A D + V NL L P A T+T
Sbjct: 414 AKEVAKPSPATDSQFPVPNLEVLLRPPAVTST 445
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 272 (100.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 69/221 (31%), Positives = 114/221 (51%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVL-CLQYDE-RVIISGSSDSTVRVWDVNTGEMVNTL 310
D +++ D S + + L GHTG V C E +++S S DST+R+W + T V T
Sbjct: 429 DINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY 488
Query: 311 IHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D 366
H V +RF+ +G V+CS D++ +W S + RV VGH + V+ V F +
Sbjct: 489 RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQAL---RVFVGHLSDVDCVQFHPN 545
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 424
Y+ + S DRT+++W+ + + VR + GHK ++ L + R + SGS D+ I +WD+
Sbjct: 546 SNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDL 605
Query: 425 ECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
G+ + L H V I F D + + D + +W+
Sbjct: 606 SNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 266 (98.7 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 75/243 (30%), Positives = 123/243 (50%)
Query: 233 NS-KGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
NS +GV C + D + G D+++++W SL K+ T L R +
Sbjct: 375 NSHQGVTCAEISDDSTMLACGFGDSSVRIW---SLTPAKLRTLKDADSL------RELDK 425
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDMVSPNEI 347
S+D VR+ D +GE+ +L+ H V F+ M +++CS+D +I +W +++ + +
Sbjct: 426 ESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCV 485
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
R GH V V F Y VS S D+T ++W T S + +R GH + C+Q+
Sbjct: 486 VTYR---GHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQF 542
Query: 406 R--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKV 461
V +GSSD T+RLWD G +R++ GH+ V + F A + + SG+ D I +
Sbjct: 543 HPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIII 602
Query: 462 WNL 464
W+L
Sbjct: 603 WDL 605
Score = 195 (73.7 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 62/253 (24%), Positives = 113/253 (44%)
Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRD-RLVVSGSSDNTIRYRD--EFQIVS 178
S D +++ + S E R+L GH + C + L++S S D+TIR + V
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 179 SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVY 238
+ +WD + ++ P + W Q + + V
Sbjct: 487 TYRGHVYPVWD-VRFA--PHGYYFVSCSYDKTARL---WATDSN--QALRVFVGHLSDVD 538
Query: 239 CLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDS 294
C+Q+ + + + +G D T+++WD ++ Q ++++TGH GSV L + R + SGS D
Sbjct: 539 CVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDH 598
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITL-RR 351
+ +WD++ G +V TL+ H V + FS +G ++ D ++ +WD E +
Sbjct: 599 NIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNH 658
Query: 352 VLVGHRAAVNVVD 364
+ V H N D
Sbjct: 659 ITVSHHQDENDED 671
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 72/248 (29%), Positives = 119/248 (47%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
LQ I S N + + + +G D + VW C+ LTGHT + LQ
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 284 --ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S D I +W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ I + H AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DVRRKGCIFKYK---SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHS 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGA 454
+ +++ + L+ SGSSD TIR WD+E + +E VRCI F+ + G
Sbjct: 190 GPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 249
Query: 455 YDGKIKVW 462
+ ++V+
Sbjct: 250 FQDSLRVY 257
Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 57/209 (27%), Positives = 100/209 (47%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + + S++ + R++ +G D V VW VN V +L H + L+ S
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 324 --NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF ++ S S D I
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAK---ILRTLLGHKANICSLDFHPYGSFVASGSLDTDI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ + H + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHS 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 56/173 (32%), Positives = 85/173 (49%)
Query: 303 TGEMVNTLIHHCEAV--LHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L L S G ++ T D + VW + PN + L GH
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS---LTGHTTP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
+ + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWD+ C+ + H + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 159 (61.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 54/220 (24%), Positives = 101/220 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD-- 172
+ + + D + VW+ + V +L GH I LQ ++ L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC- 229
+I+ + H I DF Y ++ + ++ ++R C
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGS-----------FVASGSLDTDIKLWD--VRRKGCI 140
Query: 230 --RSENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--D 283
+++ V CL++ D K + S D+T+K+WD + + + TGH+G V +++
Sbjct: 141 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPS 200
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
E ++ SGSSD T+R WD+ +V+ + V + F+
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFN 240
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 242 (90.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 63/238 (26%), Positives = 114/238 (47%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS 292
V +Q+ H + S RD T+++W HT V + + D + + + S
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLR 350
D +++VW + + +L H V +FS +G ++V+CS+D++I +WD + +
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 351 RVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-- 406
VG N VDF+ I SA D+T+KVW+ + ++ H G+ C+ +
Sbjct: 183 SDSVGF---ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
D +V+ SSD T+++ D+ G + L+GH V + F + SG D ++ +W
Sbjct: 240 DNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 194 (73.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 53/203 (26%), Positives = 98/203 (48%)
Query: 272 GHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MM 327
GH ++ L L + + + + S D+ + +W+ + H + V ++FS +G ++
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+DR++ +W P++ H A V VDF D +++ +AS D++IKVW+
Sbjct: 76 ASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 132
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
F+ +L H + C ++ RL+VS S D TI++WD C+ +
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV 192
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F+ I S D +KVW++
Sbjct: 193 DFNPSGTCIASAGSDQTVKVWDV 215
Score = 189 (71.6 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 272 GHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-M 327
GH V +Q+ ++ S S D TVR+W + + H V + FS +G +
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 117
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
T S+D+SI VW M + L H V F D + IVS S D+TIK+W+T+
Sbjct: 118 ATASEDKSIKVWSMYRQRFLYS---LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 386 SCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+ + V + + + + S SD T+++WD+ L+ + H V CI
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 234
Query: 444 RFDAKR--IVSGAYDGKIKVWNLV 465
F +V+ + DG +K+ +L+
Sbjct: 235 SFHPSDNYLVTASSDGTLKILDLL 258
Score = 180 (68.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 56/202 (27%), Positives = 99/202 (49%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D +++ +AS D++IKVW+ F+ +L H + C ++ RL+VS S D TI+ D
Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 173 EF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRIN 228
Q V++ D++ +F++++ P + W R+ K LLQ
Sbjct: 173 TTNKQCVNN-FSDSVGFANFVDFN--PSGTCIASAGSDQTVKV---WDVRVNK-LLQHYQ 225
Query: 229 CRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE-- 284
+S GV C+ + D+ +V+ D T+K+ D + + I L GHTG V + + +
Sbjct: 226 V---HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 282
Query: 285 RVIISGSSDSTVRVWDVNTGEM 306
+ SG +D+ V +W N E+
Sbjct: 283 ELFASGGADTQVLLWRTNFDEL 304
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 341 MVSPNEI-TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
M S E L R GH+AA+ +D K + +AS D + +WN GHK
Sbjct: 1 MASATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHK 60
Query: 398 RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +Q+ L+ S S D T+RLW + + H VR + F D + + +
Sbjct: 61 DVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 454 AYDGKIKVWNL 464
+ D IKVW++
Sbjct: 121 SEDKSIKVWSM 131
Score = 129 (50.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/175 (26%), Positives = 73/175 (41%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSS 292
V C ++ D IVS D TIK+WD + QC+ + G + ++ I S S
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 206
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
D TV+VWDV +++ H V + F + S ++ E L
Sbjct: 207 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTAS-SDGTLKILDLLEGRLIYT 265
Query: 353 LVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
L GH V V F + + ASG D + +W T+ E + +KR + L +
Sbjct: 266 LQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDE-LHCKGLNKRNLKRLHF 319
Score = 66 (28.3 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 165
+ L PN K + +AS D + +WN GHK + +Q+ L+ S S D
Sbjct: 24 LDLSPN--GKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRD 81
Query: 166 NTIR 169
T+R
Sbjct: 82 RTVR 85
Score = 49 (22.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDNTIR----YRD 172
+ SAS DRT+++W H + + + D + + + S D +I+ YR
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 134
Query: 173 EF 174
F
Sbjct: 135 RF 136
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 275 (101.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 74/248 (29%), Positives = 124/248 (50%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL--CLQ 281
LQ+I + D ++V+G D T+++W+ + K GHTG+VL +
Sbjct: 766 LQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS 825
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM 341
D R I+SGS ++ V++WD TG+++ TL + + + KD I +WD
Sbjct: 826 SDGRQIVSGSIEA-VKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDA 884
Query: 342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
TL++ L H A+ + F D K +V+ S D TIK W+ + V+ GH +
Sbjct: 885 AG----TLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDIT-IGGVQEAVGHSKH 939
Query: 400 IAC--LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455
+ L +++ SGS+D TI+LWD G + L GH + V + F D ++IVS +
Sbjct: 940 VTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSS 999
Query: 456 DGKIKVWN 463
+ +K+W+
Sbjct: 1000 EA-VKIWD 1006
Score = 273 (101.2 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 76/232 (32%), Positives = 119/232 (51%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
D +IVSG + +K+WD + +K L +G GSV D R I +G D + +WD
Sbjct: 827 DGRQIVSGSIE-AVKLWDAATGDLLKTLASGFAGSV-AFSPDSRQIAAGFKDGKIFIWDA 884
Query: 302 NTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDMVSPNEITLRRV--LVGHR 357
G + TL H A++ + FS + +VTCS D +I WD IT+ V VGH
Sbjct: 885 -AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD------ITIGGVQEAVGHS 937
Query: 358 AAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSG 413
V V+ D K I S S D+TIK+W+ ++ + +TL GH + + + +R +VS
Sbjct: 938 KHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSC 997
Query: 414 SSDNTIRLWDIECGACLRVLEGHEEL-VRCIRFDAKRIVSGAYDGKIKVWNL 464
SS+ +++WD G E + + + D K I SG +G+IK+W++
Sbjct: 998 SSE-AVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDM 1048
Score = 252 (93.8 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 87/362 (24%), Positives = 162/362 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
D K I S S IK+W+T++ +TL+G H + +Q ++ D+ +
Sbjct: 631 DGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKL----- 685
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSEN 233
I+S +D ++++WD I +++ + K + +
Sbjct: 686 --IISGYYDGSVMLWD---------------TTTGDRQEIADHFGISKVNYTYLQPPEQG 728
Query: 234 SKGVYCLQYD-DHKIVSGL---RDNT-IKVWDRVSLQCIKVLTGHTG--SVLCLQYDERV 286
G++ + D K ++ RD+T I ++D + K+L GH+ S + D R
Sbjct: 729 GYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQ 788
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPN 345
+++GS D TVR+W+ TG++ T + H VL + S+ G + ++ +WD + +
Sbjct: 789 LVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAATGD 848
Query: 346 EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
L+ + G +V D + I + D I +W+ + +TL H I + +
Sbjct: 849 --LLKTLASGFAGSV-AFSPDSRQIAAGFKDGKIFIWDAAGT-LQKTLERHPGAIMSIAF 904
Query: 406 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV 461
+ +V+ S+D+TI+ WDI G + GH + V + D K I SG+ D IK+
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKL 963
Query: 462 WN 463
W+
Sbjct: 964 WD 965
Score = 230 (86.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 89/367 (24%), Positives = 166/367 (45%)
Query: 89 HYQHGHIN-TYLKPMLQRDFISLLPNF--DEKYIVSA--SGDRT-IKVWNTSSCEFVRTL 142
H+ +N TYL+P Q + F D K I + S D T I +++T++ + + L
Sbjct: 711 HFGISKVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKIL 770
Query: 143 NGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQX 200
GH + + + R +V+GS D T+R + + + T F+ ++ T +
Sbjct: 771 KGHSHECSTMAFSSDSRQLVTGSVDCTVRL---WNTTTGDLEKT-----FVGHTGTVLSV 822
Query: 201 XXXXXXXXXXX-XIE--NNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257
IE W L + + G D +I +G +D I
Sbjct: 823 AISSDGRQIVSGSIEAVKLWDAATGDL--LKTLASGFAGSVAFSPDSRQIAAGFKDGKIF 880
Query: 258 VWDRV-SLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC 314
+WD +LQ K L H G+++ + + D + +++ S+DST++ WD+ G V + H
Sbjct: 881 IWDAAGTLQ--KTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGHS 937
Query: 315 EAVLHLRFS-NGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI 370
+ V + S +G ++ S D++I +WD + + L++ L GH V V F D + I
Sbjct: 938 KHVTTMVLSPDGKVIASGSADKTIKLWDAATGD---LQKTLTGHLDTVEKVVFSLDNRQI 994
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRLWDIECGAC 429
VS S + +K+W+ ++ + + I + + + SG + I+LWD+ G+
Sbjct: 995 VSCSSE-AVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSL 1053
Query: 430 LRVLEGH 436
L+ + G+
Sbjct: 1054 LKTMAGY 1060
Score = 211 (79.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 79/300 (26%), Positives = 140/300 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D + +V+ S D T+++WNT++ + +T GH + L V+ SSD
Sbjct: 785 DSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTV--------LSVAISSDGR------- 829
Query: 175 QIVSSSHDDTILIWDFL--NYSETPIQXXXXXXXXX-XXXXIENNWRMGK-FL------L 224
QIVS S + + +WD + +T I ++ GK F+ L
Sbjct: 830 QIVSGSIE-AVKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTL 888
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQY 282
Q+ R + D ++V+ D+TIK WD +++ ++ GH+ V + L
Sbjct: 889 QKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD-ITIGGVQEAVGHSKHVTTMVLSP 947
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWD 340
D +VI SGS+D T+++WD TG++ TL H + V + FS N +V+CS + ++ +WD
Sbjct: 948 DGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWD 1006
Query: 341 MVS---PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ N V + V D K+I S + IK+W+ ++ ++T+ G++
Sbjct: 1007 AATGKVQNSFESDDVFT-----IVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYR 1061
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/202 (27%), Positives = 97/202 (48%)
Query: 291 SSDST-VRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI 347
S DST + ++D TG++ L H + FS+ +VT S D ++ +W+ + +
Sbjct: 750 SRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGD-- 807
Query: 348 TLRRVLVGHRAAV-NV-VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
L + VGH V +V + D + IVS S + +K+W+ ++ + ++TL G
Sbjct: 808 -LEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLASGFAGSVAFSP 865
Query: 406 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
R + +G D I +WD G + LE H + I F D K++V+ + D IK W+
Sbjct: 866 DSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD 924
Query: 464 LVAALDPRAPTTTLCLRTLVVS 485
+ A + + T+V+S
Sbjct: 925 ITIGGVQEAVGHSKHVTTMVLS 946
Score = 58 (25.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
+L++S S+D I+LWD G + L H + +
Sbjct: 1096 KLILSTSTDRAIKLWDAATGDLQKRLPCHSDSI 1128
Score = 58 (25.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 425
D K+I S + IK+W+ ++ ++T+ G++ D LV T ++DI+
Sbjct: 1030 DGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKF------DSLV-------TTEVFDIQ 1076
Query: 426 CGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAA-LDPRAP 473
L+ + ++ + DAK I+S + D IK+W+ L R P
Sbjct: 1077 ----LQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLP 1122
Score = 50 (22.7 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 410 VVSGSSDNTIRLWDIE 425
+ + S+D TIR+W IE
Sbjct: 1155 IAAASADKTIRVWSIE 1170
Score = 41 (19.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 435 GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468
G+ + + F D + I + + D I+VW++ +L
Sbjct: 1138 GYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKSL 1173
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 241 (89.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 64/239 (26%), Positives = 123/239 (51%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D+ ++SG ++ +K+W+R +LQCI+ + LC + +R +I G+ ++++D
Sbjct: 421 DNIAVLSGAAES-VKIWNRSTLQCIRTMDCEYA--LCSLFVPGDRQVIVGTKTGKLQLYD 477
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDM-VSPNEITLRRVLVGHR 357
+ +G ++ TL H AV + S VT D+ + WD + +E ++++ L +
Sbjct: 478 LASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQKRLSMKQ 537
Query: 358 AAVNVVDFD---------EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ--YR 406
+ +D D +K + + D T+KV+ T + +F +L GHK + C+ Y
Sbjct: 538 VRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYD 597
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
L+ +GS+D +++W ++ G C R L H++ V ++F AK + D KIK W+
Sbjct: 598 GALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWD 656
Score = 200 (75.5 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 59/240 (24%), Positives = 113/240 (47%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWD- 300
D +++ G + ++++D S ++ L H G+V + L D+R ++G +D V+ WD
Sbjct: 461 DRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDF 520
Query: 301 --VNTGEMVNT--------LIHHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEIT 348
V + ++ E VL +R+S N ++ S D ++ V+ + +
Sbjct: 521 ELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVF---YTDTLK 577
Query: 349 LRRVLVGHRAAVNVVD--FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY- 405
L GH+ V +D +D I + S DR +K+W + R+L H + LQ+
Sbjct: 578 FFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFV 637
Query: 406 -RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
+ L + DN I+ WD + ++ LEGH + V C+ + +VS ++D +++W
Sbjct: 638 AKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLW 697
Score = 178 (67.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 55/190 (28%), Positives = 97/190 (51%)
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVL 353
V VWD GE V ++ + LR S +G+ + +D SI ++ ++S E ++
Sbjct: 47 VFVWDARKGEKV-LILKGSKHESCLRPSPDGLHLAVGYEDGSIRIFSLLS-GEASV--AF 102
Query: 354 VGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA---CLQYRDR 408
GH+AAV + +D+ +VS S D + VW+ + + L GHK + L+ ++
Sbjct: 103 NGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNL 162
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWNL-- 464
LV SG D ++ WD++ C + L GH V + + KR+++G D +++VW++
Sbjct: 163 LVTSGK-DTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDITY 221
Query: 465 VAAL-DPRAP 473
+ L DP P
Sbjct: 222 IQELEDPDEP 231
Score = 174 (66.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 57/221 (25%), Positives = 104/221 (47%)
Query: 223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD------------RVSLQCIKVL 270
L++ +N + + L D V+G D +K WD R+S++ +++L
Sbjct: 483 LMETLNAH-DGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQKRLSMKQVRIL 541
Query: 271 TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL--HLRFSNGM 326
VLC++Y +++++ D TV+V+ +T + +L H VL + + +
Sbjct: 542 QLDE-DVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGAL 600
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNT 384
+ T S DR++ +W + + R L H +V + F K ++ +G D IK W+
Sbjct: 601 IATGSADRNVKIWGLDFGD---CHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDA 657
Query: 385 SSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWD 423
E ++TL GH + + CL VVS S D ++RLW+
Sbjct: 658 DKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 232 ENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--I 287
+ SK CL+ D + G D +I+++ +S + GH +V LQYD+ +
Sbjct: 62 KGSKHESCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRL 121
Query: 288 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPN 345
+SGS D+ V VWDV + L H +AV + F ++VT KD + WD+ + +
Sbjct: 122 VSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQH 181
Query: 346 EITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWN 383
+ LVGHR V + +EK +++ + D ++VW+
Sbjct: 182 CF---KTLVGHRTEVWGMALVSEEKRLITGTADSELRVWD 218
Score = 140 (54.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 344 PNEITLRRVLVG-HRAAVNVVDFDEKYIVSASGD-RTIKVWNTSSCEFVRTLNGHKRGIA 401
P + R+ +G HR+ V + F I SG ++K+WN S+ + +RT++ +
Sbjct: 396 PQAVRASRITIGGHRSDVRTLAFSSDNIAVLSGAAESVKIWNRSTLQCIRTMDCEYALCS 455
Query: 402 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKI 459
DR V+ G+ ++L+D+ G + L H+ V I D + V+G D +
Sbjct: 456 LFVPGDRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCV 515
Query: 460 KVWNLVAALD 469
K W+ D
Sbjct: 516 KFWDFELVKD 525
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/251 (24%), Positives = 104/251 (41%)
Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDN 166
SL D + IV + +++++ +S + TLN H + L R V+G +D
Sbjct: 455 SLFVPGDRQVIVGTKTGK-LQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADK 513
Query: 167 TIRYRDEFQIVS--SSHDDTI---------LIWDFLNYSETPIQXXXXXXXXXXXXXIEN 215
+++ D F++V SS + L D L +P Q +
Sbjct: 514 CVKFWD-FELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFY 572
Query: 216 NWRMGKFLLQRINCRSENSKGVYCLQ--YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH 273
+ KF L + V C+ YD I +G D +K+W C + L H
Sbjct: 573 TDTL-KFFLSLYG----HKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAH 627
Query: 274 TGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVT 329
SV+ LQ+ + + D+ ++ WD + E + TL H + V L S NG +V+
Sbjct: 628 DDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVS 687
Query: 330 CSKDRSIAVWD 340
S D+S+ +W+
Sbjct: 688 ASHDKSLRLWE 698
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG--HRAAVNVVDFDEKYIVSA 373
A + LR G V + VWD ++ +L G H + + D ++
Sbjct: 27 AFVTLRGERGRCVAVPACEHVFVWDARKGEKVL---ILKGSKHESCLRPSP-DGLHLAVG 82
Query: 374 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL---VVSGSSDNTIRLWDIECGACL 430
D +I++++ S E NGHK + LQY D+L +VSGS D + +WD+ + L
Sbjct: 83 YEDGSIRIFSLLSGEASVAFNGHKAAVTALQY-DQLGGRLVSGSKDTDVIVWDVINESGL 141
Query: 431 RVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
L+GH++ V + F + +V+ D +K W+L
Sbjct: 142 YRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDL 177
Score = 122 (48.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 48/213 (22%), Positives = 96/213 (45%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH V L + D ++SG+++S V++W+ +T + + T+ CE L F G +
Sbjct: 408 GHRSDVRTLAFSSDNIAVLSGAAES-VKIWNRSTLQCIRTM--DCEYALCSLFVPGDRQV 464
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS-- 385
+ +K + ++D+ S + G ++ + D++ V+ D+ +K W+
Sbjct: 465 IVGTKTGKLQLYDLASGTLMETLNAHDGAVWSI-ALSPDQRGFVTGGADKCVKFWDFELV 523
Query: 386 ----------SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL 433
S + VR L + + C++Y +L+ D T++++ + L
Sbjct: 524 KDESSIQKRLSMKQVRILQLDE-DVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSL 582
Query: 434 EGHEELVRC--IRFDAKRIVSGAYDGKIKVWNL 464
GH+ V C I +D I +G+ D +K+W L
Sbjct: 583 YGHKLPVLCMDISYDGALIATGSADRNVKIWGL 615
Score = 112 (44.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
L R+ + V L+ + + SG +D +K WD + C K L GH V + L
Sbjct: 141 LYRLKGHKDAVTQVLFLKEKNLLVTSG-KDTLVKWWDLDTQHCFKTLVGHRTEVWGMALV 199
Query: 282 YDERVIISGSSDSTVRVWDV 301
+E+ +I+G++DS +RVWD+
Sbjct: 200 SEEKRLITGTADSELRVWDI 219
Score = 79 (32.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 110 LLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
L P+ D ++ D +I++++ S E NGHK + LQY D+L G
Sbjct: 70 LRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQY-DQL---GG------ 119
Query: 170 YRDEFQIVSSSHDDTILIWDFLNYS 194
++VS S D +++WD +N S
Sbjct: 120 -----RLVSGSKDTDVIVWDVINES 139
Score = 72 (30.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 105 RDFISLLPNFDEKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVV 160
+D ++ + EK ++ SG D +K W+ + +TL GH+ G+A + RL+
Sbjct: 148 KDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLI- 206
Query: 161 SGSSDNTIRYRD 172
+G++D+ +R D
Sbjct: 207 TGTADSELRVWD 218
Score = 59 (25.8 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA---CLQYRDRLVVSGSSDNTIRYRD 172
+VS S D + VW+ + + L GHK + L+ ++ LV SG D +++ D
Sbjct: 121 LVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGK-DTLVKWWD 176
Score = 59 (25.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 165
D +L + D ++S + + ++K+WN S+ + +RT++ + DR V+ G+
Sbjct: 412 DVRTLAFSSDNIAVLSGAAE-SVKIWNRSTLQCIRTMDCEYALCSLFVPGDRQVIVGTKT 470
Query: 166 NTIRYRD 172
++ D
Sbjct: 471 GKLQLYD 477
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 252 (93.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + +G D ++W + L H G + L+++++ I+
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + SN +CS D I V + I
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 343 ---KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 406 R-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ ++ S S D+T+RLWD++ G C+ L H+E V + F D + + S
Sbjct: 400 SPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 459
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 460 GSFDKCVHIWN 470
Score = 146 (56.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 50/250 (20%), Positives = 105/250 (42%)
Query: 235 KG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISG 290
KG ++ L+++ + I+S D T +WD + + ++ H+ L + + S
Sbjct: 266 KGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASC 325
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
S+D + V + + T H V +++ + ++ +CS D ++ +W M N +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV- 384
Query: 349 LRRVLVGHRAAVNVVDFDEK-----------YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
L H + + + + SAS D T+++W+ + TL H+
Sbjct: 385 --HDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGA 454
+ + + R + SGS D + +W+ + GA + G + C ++ + A
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASA 502
Query: 455 YDGKIKVWNL 464
DG + V +L
Sbjct: 503 SDGSVCVLDL 512
Score = 56 (24.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + +G + + C++ + V S ++ + E +
Sbjct: 184 LASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 239
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 240 LATGSYDGFARIW 252
Score = 48 (22.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 279
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 280 ---------F-ILSAGVDKTTIIWD 294
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTAR 194
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 252 (93.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + +G D ++W + L H G + L+++++ I+
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + SN +CS D I V + I
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 343 ---KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 406 R-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ ++ S S D+T+RLWD++ G C+ L H+E V + F D + + S
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 459
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 460 GSFDKCVHIWN 470
Score = 143 (55.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 50/250 (20%), Positives = 104/250 (41%)
Query: 235 KG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISG 290
KG ++ L+++ + I+S D T +WD + + + H+ L + + S
Sbjct: 266 KGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASC 325
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
S+D + V + + T H V +++ + ++ +CS D ++ +W M N +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV- 384
Query: 349 LRRVLVGHRAAVNVVDFDEK-----------YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
L H + + + + SAS D T+++W+ + TL H+
Sbjct: 385 --HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGA 454
+ + + R + SGS D + +W+ + GA + G + C ++ + A
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASA 502
Query: 455 YDGKIKVWNL 464
DG + V +L
Sbjct: 503 SDGSVCVLDL 512
Score = 56 (24.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + +G + + C++ + V S ++ + E +
Sbjct: 184 LASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 239
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 240 LATGSYDGFARIW 252
Score = 48 (22.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 279
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 280 ---------F-ILSAGVDKTTIIWD 294
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTAR 194
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 252 (93.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + +G D ++W + L H G + L+++++ I+
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + SN +CS D I V + I
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 343 ---KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 406 R-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ ++ S S D+T+RLWD++ G C+ L H+E V + F D + + S
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 459
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 460 GSFDKCVHIWN 470
Score = 143 (55.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 50/250 (20%), Positives = 104/250 (41%)
Query: 235 KG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISG 290
KG ++ L+++ + I+S D T +WD + + + H+ L + + S
Sbjct: 266 KGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASC 325
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
S+D + V + + T H V +++ + ++ +CS D ++ +W M N +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV- 384
Query: 349 LRRVLVGHRAAVNVVDFDEK-----------YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
L H + + + + SAS D T+++W+ + TL H+
Sbjct: 385 --HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGA 454
+ + + R + SGS D + +W+ + GA + G + C ++ + A
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASA 502
Query: 455 YDGKIKVWNL 464
DG + V +L
Sbjct: 503 SDGSVCVLDL 512
Score = 56 (24.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + +G + + C++ + V S ++ + E +
Sbjct: 184 LASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 239
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 240 LATGSYDGFARIW 252
Score = 48 (22.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 279
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 280 ---------F-ILSAGVDKTTIIWD 294
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTAR 194
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 246 (91.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 60/182 (32%), Positives = 95/182 (52%)
Query: 270 LTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNG- 325
LTGH S+ + + +++S S D+T+R+WD TGE +L H ++V + F + G
Sbjct: 104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK 163
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWN 383
++ +CS D SI +WD E + + GH V+ V F Y++SAS DRTIK+W
Sbjct: 164 LLASCSADLSIKLWDFQQSYECI--KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Query: 384 TSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
++ V+T GH+ + ++ + + S+D TIR+W C L HE V
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVE 281
Query: 442 CI 443
CI
Sbjct: 282 CI 283
Score = 206 (77.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 55/192 (28%), Positives = 92/192 (47%)
Query: 284 ERVIISGSSDSTVRV---WDVNTGEMVNTLIHHCE---AVLHLRFSNGMMVTCSKDRSIA 337
E+ +I G+ R W E + H + H F+ +MV+ S+D +I
Sbjct: 76 EKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFA--LMVSASEDATIR 133
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWN-TSSCEFVRTLN 394
+WD + R L GH +V V FD K + S S D +IK+W+ S E ++T++
Sbjct: 134 IWDFETGE---YERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMH 190
Query: 395 GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--FDAKRI 450
GH ++ + + V+S S D TI++W++ G C++ GH E VR +R +
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIF 250
Query: 451 VSGAYDGKIKVW 462
+ + D I+VW
Sbjct: 251 ATCSNDQTIRVW 262
Score = 182 (69.1 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 46/177 (25%), Positives = 90/177 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
+VS D TI++WD + + + L GHT SV + +D +++ S S+D ++++WD
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 305 -EMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
E + T+ H V + F + +++ S+DR+I +W++ + + + GHR V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCV---KTYTGHREWVR 239
Query: 362 VV--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 416
+V + + S D+TI+VW T+S + L H+ + C+ + S ++
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINE 296
Score = 158 (60.7 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
++ S S D+TI++W+ S + TL+GH + L + + +VS S D TIR+WD+
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 427 GACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
C++ L H+ I F ++SG+ D +KVW
Sbjct: 371 KRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 156 (60.0 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP 344
+ SGS D T+R+WDV+ G + TL H V L F G +V+ S D++I VWD+
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL--R 369
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
N+ ++ L H+ +DF + Y++S S D+T+KVW
Sbjct: 370 NKRCMK-TLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 142 (55.0 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-CIKVLTGHTGSVLCLQYDE--RVI 287
++N KG + + SG RD TI++WD VS+ C+ L+GH V L + + +
Sbjct: 300 ADNKKG----HHQGPFLASGSRDKTIRIWD-VSVGLCLLTLSGHDNWVRGLAFHPGGKYL 354
Query: 288 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
+S S D T+RVWD+ + TL H + F ++ +++ S D+++ VW+
Sbjct: 355 VSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 138 (53.6 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 36/100 (36%), Positives = 55/100 (55%)
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCE 388
S+D++I +WD VS L L GH V + F KY+VSAS D+TI+VW+ +
Sbjct: 316 SRDKTIRIWD-VSVGLCLL--TLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKR 372
Query: 389 FVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIEC 426
++TL H+ + + V+SGS D T+++W EC
Sbjct: 373 CMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW--EC 410
Score = 130 (50.8 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVWNL 464
+ SGS D TIR+WD+ G CL L GH+ VR + F K +VS + D I+VW+L
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 392 TLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-- 447
+L GH+ I + + L+VS S D TIR+WD E G R L+GH + V+ + FDA
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 448 KRIVSGAYDGKIKVWN 463
K + S + D IK+W+
Sbjct: 163 KLLASCSADLSIKLWD 178
Score = 116 (45.9 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 42/181 (23%), Positives = 78/181 (43%)
Query: 141 TLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYS 194
+L GH+ I + + L+VS S D TIR D E++ H D++ D +
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQ--DVAFDA 160
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254
+ + + ++ ++ ++ N V + D+ ++S RD
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYEC----IKTMHGHDHNVSSVAFVPAGDY-VLSASRDR 215
Query: 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
TIK+W+ + C+K TGH V ++ + + + S+D T+RVW N+ + L
Sbjct: 216 TIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD 275
Query: 313 H 313
H
Sbjct: 276 H 276
Score = 92 (37.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD 165
++ +P D Y++SAS DRTIK+W ++ V+T GH+ + ++ + + S+D
Sbjct: 199 VAFVPAGD--YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSND 256
Query: 166 NTIR 169
TIR
Sbjct: 257 QTIR 260
Score = 90 (36.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 37/182 (20%), Positives = 74/182 (40%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR---YRDE 173
+VSAS D TI++W+ + E+ R+L GH + + + + +L+ S S+D +I+ ++
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK-FLLQRINCRSE 232
++ + + H D N S W + + ++ E
Sbjct: 183 YECIKTMHGH-----DH-NVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHRE 236
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS 292
+ V + + + D TI+VW S C L H +V C+ + S +
Sbjct: 237 WVRMVR-VHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAIN 295
Query: 293 DS 294
++
Sbjct: 296 EA 297
Score = 89 (36.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 105 RDFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG- 162
R+++ ++ + + + S D+TI+VW T+S + L H+ + C+ + S
Sbjct: 235 REWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAI 294
Query: 163 ----SSDNTIRYRDEFQIVSSSHDDTILIWD 189
+DN + + S S D TI IWD
Sbjct: 295 NEAAGADNKKGHHQGPFLASGSRDKTIRIWD 325
Score = 81 (33.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 117 KYIVSASGDRTIKVWN-TSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR 169
K + S S D +IK+W+ S E ++T++GH ++ + + V+S S D TI+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIK 218
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 450 IVSGAYDGKIKVWNLVAAL 468
+ SG+ D I++W++ L
Sbjct: 312 LASGSRDKTIRIWDVSVGL 330
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 246 (91.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 65/239 (27%), Positives = 116/239 (48%)
Query: 237 VYCLQYDD--HKIVSGLRDNTIKVW-DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
V C+ + H + SG RD T+++W V + V HT +V + + D +++++ S
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQLLVTAS 122
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITL 349
D TV+VW + + +L H V +FS +G ++V+ S D+++ +WD S +
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV-- 180
Query: 350 RRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V VDF ++A+G D T+KVW+T + V+ H + L +
Sbjct: 181 -HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP 239
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
+++ SSD+T+++ D+ G L L GH+ + F + SG D ++ VW
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 242 (90.2 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MM 327
GH +V C+ + + + + SGS DST+ +W + H +AV + FS +G ++
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+D+++ +W E T+ R H A V V F D + +V+AS D+T+KVW+T
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRA---HTATVRSVHFCSDGQLLVTASDDKTVKVWSTH 133
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
F+ +L H + C ++ RL+VS S D T++LWD C+ H V +
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 193
Query: 444 RFDAKR--IVSGAYDGKIKVWN 463
F I + D +KVW+
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWD 215
Score = 227 (85.0 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 76/297 (25%), Positives = 123/297 (41%)
Query: 105 RDFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVS 161
RD ++ + + + K++ S S D T+ +W+ GHK + C+ + L+ S
Sbjct: 19 RDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLAS 78
Query: 162 GSSDNTIRY-----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN 216
GS D T+R + E V +H T+ F + + + +
Sbjct: 79 GSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST---HR 134
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
R L Q IN V C ++ D IVS D T+K+WD+ S +C+ H
Sbjct: 135 QRFLFSLTQHINW-------VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 275 GSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTC 330
G V + + I + D+TV+VWD T +V H AV L F S ++T
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITA 247
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTS 385
S D ++ + D++ E L L GH+ V F +Y S D + VW ++
Sbjct: 248 SSDSTLKILDLM---EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 221 (82.9 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 72/297 (24%), Positives = 129/297 (43%)
Query: 140 RTLNGHKRGIACLQY--RDRLVVSGSSDNTI---RYRDEFQIVS-SSHDDTILIWDFLNY 193
R GH+ + C+ + + + SGS D+T+ + + + + H D + +N+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC---VNF 69
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
S + + N G+ + R + + S +C D +V+ D
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNV--KGESTVFRAHTATVRSVH-FCS--DGQLLVTASDD 124
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
T+KVW + + LT H V C ++ D R+I+S S D TV++WD + E V++
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 184
Query: 312 HHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK- 368
H V ++ F S + D ++ VWD + + L H AAVN + F
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-TRTHRLVQHYQL--HSAAVNALSFHPSG 241
Query: 369 -YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLW 422
Y+++AS D T+K+ + + TL+GH+ + + SG SD + +W
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 171 (65.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 343 SPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
S + +L R GHR AV VDF + K++ S S D T+ +W+ GHK +
Sbjct: 5 SQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAV 64
Query: 401 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD 456
C+ + L+ SGS D T+R+W V H VR + F D + +V+ + D
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDD 124
Query: 457 GKIKVWN 463
+KVW+
Sbjct: 125 KTVKVWS 131
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 252 (93.8 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + +G D ++W + L H G + L+++++ I+
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + SN +CS D I V + I
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 343 ---KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 406 R-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ ++ S S D+T+RLWD++ G C+ L H+E V + F D + + S
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 459
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 460 GSFDKCVHIWN 470
Score = 143 (55.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 50/250 (20%), Positives = 104/250 (41%)
Query: 235 KG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISG 290
KG ++ L+++ + I+S D T +WD + + + H+ L + + S
Sbjct: 266 KGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASC 325
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
S+D + V + + T H V +++ + ++ +CS D ++ +W M N +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV- 384
Query: 349 LRRVLVGHRAAVNVVDFDEK-----------YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
L H + + + + SAS D T+++W+ + TL H+
Sbjct: 385 --HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGA 454
+ + + R + SGS D + +W+ + GA + G + C ++ + A
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASA 502
Query: 455 YDGKIKVWNL 464
DG + V +L
Sbjct: 503 SDGSVCVLDL 512
Score = 55 (24.4 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + +G + + C++ + V S ++ + E +
Sbjct: 184 LASGSGDSTARIWNLSE----NSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 239
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 240 LATGSYDGFARIW 252
Score = 48 (22.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 279
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 280 ---------F-ILSAGVDKTTIIWD 294
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTAR 194
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 252 (93.8 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + +G D ++W + L H G + L+++++ I+
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + SN +CS D I V + I
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 343 ---KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 406 R-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ ++ S S D+T+RLWD++ G C+ L H+E V + F D + + S
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 459
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 460 GSFDKCVHIWN 470
Score = 143 (55.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 50/250 (20%), Positives = 104/250 (41%)
Query: 235 KG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISG 290
KG ++ L+++ + I+S D T +WD + + + H+ L + + S
Sbjct: 266 KGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASC 325
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
S+D + V + + T H V +++ + ++ +CS D ++ +W M N +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV- 384
Query: 349 LRRVLVGHRAAVNVVDFDEK-----------YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
L H + + + + SAS D T+++W+ + TL H+
Sbjct: 385 --HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGA 454
+ + + R + SGS D + +W+ + GA + G + C ++ + A
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASA 502
Query: 455 YDGKIKVWNL 464
DG + V +L
Sbjct: 503 SDGSVCVLDL 512
Score = 55 (24.4 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + +G + + C++ + V S ++ + E +
Sbjct: 184 LASGSGDSTARIWNLSE----NSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 239
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 240 LATGSYDGFARIW 252
Score = 48 (22.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 279
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 280 ---------F-ILSAGVDKTTIIWD 294
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTAR 194
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 263 (97.6 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 93/368 (25%), Positives = 167/368 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDE- 173
KY+ S SGD T++ W+ S+ T GH+ + + + + + SG + + D
Sbjct: 127 KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPS 186
Query: 174 --FQI--VSSSHDDTI--LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
Q+ + H I L W+ L+ + P + W +RI
Sbjct: 187 TGLQVGRTLTGHSKWITGLSWEPLHMN--PECRYVASSSKDGSVRV---WDTTAGRCERI 241
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV----LCLQY 282
+ +++ V CL++ D + S +D TIKVW + L GH V L Y
Sbjct: 242 --LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 299
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD 340
R +++TV D+ G + L + +L G +V+ S D ++ +W
Sbjct: 300 ALRTGAFEPAEATVNAQDLQ-GSL-KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWS 357
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ R + GH+A +N V F D + + SAS D++IK+W+ + +++ +L GH
Sbjct: 358 PAEDKKPLAR--MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ + + RL+VSGSSD+T+++WD++ L GH + V + + D +R+ SG
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 455 YDGKIKVW 462
D +++W
Sbjct: 476 KDKCLRIW 483
Score = 237 (88.5 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 64/227 (28%), Positives = 113/227 (49%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D +++VWD + +C ++LTGHT SV CL++ + ++ S S D T++VW + G
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 278
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
+ TL H V + S + + +L+ + + N+V
Sbjct: 279 LCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRG 338
Query: 366 D-EKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL 421
+ +VS S D T+ +W+ + + + + GH+ I + + R+V S S D +I+L
Sbjct: 339 QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKL 398
Query: 422 WDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
WD G L L GH V I + D++ +VSG+ D +KVW++ A
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 227 (85.0 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 59/210 (28%), Positives = 106/210 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GH+ +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVL 160
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNE-ITLRRVLVGHRAAVNVVDFDE-------K 368
+ +S +G + K+ + +WD P+ + + R L GH + + ++ +
Sbjct: 161 SISWSPDGKKLASGCKNGQVLLWD---PSTGLQVGRTLTGHSKWITGLSWEPLHMNPECR 217
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECG 427
Y+ S+S D +++VW+T++ R L GH + + CL++ D L+ S S D TI++W G
Sbjct: 218 YVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
Query: 428 ACLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + + +GA++
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYALRTGAFE 307
Score = 198 (74.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 67/245 (27%), Positives = 110/245 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ SG D T++ WD + GH VL + + D + + SG + V +WD +TG
Sbjct: 129 LASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTG 188
Query: 305 EMVN-TLIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
V TL H + + LH+ + + SKD S+ VWD + R+L GH
Sbjct: 189 LQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGR---CERILTGH 245
Query: 357 RAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGS 414
+V + + + + SAS DRTIKVW RTL GH + + D + +G+
Sbjct: 246 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 305
Query: 415 ---SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP 470
++ T+ D++ G+ + E +R +R+VSG+ D + +W+ P
Sbjct: 306 FEPAEATVNAQDLQ-GSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 364
Query: 471 RAPTT 475
A T
Sbjct: 365 LARMT 369
Score = 184 (69.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++L H EAV+ + FS G + + S D ++ WD+ + T GHR V + +
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW 164
Query: 366 --DEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYRD-------RLVVSGSS 415
D K + S + + +W+ S+ + RTL GH + I L + R V S S
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 224
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D ++R+WD G C R+L GH + V C+R+ ++ S + D IKVW
Sbjct: 225 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 272
Score = 136 (52.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG + + LWD G + R L GH + + + ++ + + S + DG ++
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 461 VWNLVAALDPRAPT----TTLCLR 480
VW+ A R T + CLR
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLR 253
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 258 (95.9 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 63/226 (27%), Positives = 110/226 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVWDVNTG 304
I++ L +++W+ + +K + S ++ R I + S D +R++D T
Sbjct: 122 ILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFDAETF 181
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDMVSPNEITLRRVLVGHR---AA 359
++N H + + L + +++ S DR I VWD NE + + H
Sbjct: 182 SLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDW--ENEWRMEQEFQEHAHYIMQ 239
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNT 418
+ V D + VS S D+T+KVW E + TL GH++G+ C+++ +VSGS D +
Sbjct: 240 IAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGRIVSGSDDCS 299
Query: 419 IRLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWN 463
I +WDI+ C+ L+ H+ V + I+SGA D +K+WN
Sbjct: 300 ICVWDIQTQKCIETLKNAHKNNVTFVTPFKTWIISGAEDSTVKIWN 345
Score = 192 (72.6 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 56/224 (25%), Positives = 100/224 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVWD-VNT 303
I + D I+++D + I T H+ + L + +IS S D +RVWD N
Sbjct: 164 IATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENE 223
Query: 304 GEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
M H ++ + + M V+ S D+++ VW + I L GH V
Sbjct: 224 WRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESIC---TLEGHEKGV 280
Query: 361 NVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNT 418
N V+F IVS S D +I VW+ + + + TL N HK + + ++SG+ D+T
Sbjct: 281 NCVEFLTGGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFKTWIISGAEDST 340
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYD-GKIKV 461
+++W+ + + + L + C+ ++ +D G + V
Sbjct: 341 VKIWNSQTFSLEKELNFEKGRAWCVAAGKSDAIAVGFDSGAVTV 384
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/234 (22%), Positives = 99/234 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
++ +I++A +++WN + V+ + ++ ++ R + + S D IR D
Sbjct: 118 EKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFD 177
Query: 173 E--FQIVS--SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
F +++ ++H D I + P EN WRM Q
Sbjct: 178 AETFSLINEFTAHSD--FIRSLTVHPTLPYLISASDDRKIRVWDWENEWRME----QEFQ 231
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVI 287
+ + D VSG D T+KVW + I L GH V C+++ I
Sbjct: 232 EHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGRI 291
Query: 288 ISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
+SGS D ++ VWD+ T + + TL + H V + +++ ++D ++ +W+
Sbjct: 292 VSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFKTWIISGAEDSTVKIWN 345
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/187 (26%), Positives = 87/187 (46%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSP 344
I++ V++W+ +T +V + ++ +F + + T S D+ I ++D +
Sbjct: 122 ILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFDAET- 180
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWN-TSSCEFVRTLNGHKRGIA 401
+L H + + Y++SAS DR I+VW+ + + H I
Sbjct: 181 --FSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIM 238
Query: 402 --CLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDG 457
+ D + VSGS D T+++W + + LEGHE+ V C+ F RIVSG+ D
Sbjct: 239 QIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGRIVSGSDDC 298
Query: 458 KIKVWNL 464
I VW++
Sbjct: 299 SICVWDI 305
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 229 (85.7 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 66/243 (27%), Positives = 112/243 (46%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYDE-------RV 286
V C+ + D ++ SG + +I +WD Q + L+GH + CL ++ R
Sbjct: 164 VLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRK 223
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPN 345
+ S S D R+WDV G+ + + H AV +R+ G++ T SKDR++ +W
Sbjct: 224 LASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADG- 282
Query: 346 EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS----SCEFVRTLNGHKRGIA 401
L R GH VN + Y++ +K + S S E ++ + KR A
Sbjct: 283 --ILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQE-SALKRYQA 339
Query: 402 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKI 459
+VS S DNT+ LW C+ + GH+ +V +++ D K I S ++D +
Sbjct: 340 VCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSV 399
Query: 460 KVW 462
++W
Sbjct: 400 RLW 402
Score = 227 (85.0 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 67/252 (26%), Positives = 121/252 (48%)
Query: 231 SENSKGVYCLQYDDH-------KIVSGLRDNTIKVWDRVSL-QCIKVLTGHTGSVLCLQY 282
S + K + CL ++ + K+ S D ++WD V L QC+ + GHT +V +++
Sbjct: 201 SGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWD-VKLGQCLMNIAGHTNAVTAVRW 259
Query: 283 DER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS-----KDRSI 336
+I + S D TV++W G + T H V ++ S ++ KDRS
Sbjct: 260 GGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSK 319
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
+ + S E+ L ++A V + + +VS S D T+ +W + + V + GH
Sbjct: 320 SHLSL-STEELQ-ESALKRYQA---VCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGH 374
Query: 397 KRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
+ + ++Y +L+ S S D ++RLW G + GH + V + + D++ IVS
Sbjct: 375 QNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVS 434
Query: 453 GAYDGKIKVWNL 464
G+ D +KVW++
Sbjct: 435 GSKDSTLKVWSV 446
Score = 225 (84.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 62/228 (27%), Positives = 114/228 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGS----SDSTVRVWD 300
I + +D T+K+W + +GH V + L D V+ +G D +
Sbjct: 265 IYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDY-VLRTGPFHPVKDRSKSHLS 323
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
++T E+ + + +AV + +V+CS D ++ +W + N+ R + GH+ V
Sbjct: 324 LSTEELQESALKRYQAVCPDEVES--LVSCSDDNTLYLWRN-NQNKCVER--MTGHQNVV 378
Query: 361 NVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD 416
N V + D K I SAS D+++++W S +++ T GH + + + + RL+VSGS D
Sbjct: 379 NDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKD 438
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
+T+++W ++ + L GH + V + + D R+ SG D IK+W
Sbjct: 439 STLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 189 (71.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 51/191 (26%), Positives = 91/191 (47%)
Query: 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
+C + GH +V+ L + D + SGS D+TVR+WD+NT T H + VL + +
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSW 169
Query: 323 S-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY-------IVSA 373
+ +G + K SI +WD + + R L GH+ +N + ++ + + SA
Sbjct: 170 APDGKRLASGCKAGSIIIWDPETGQQ--KGRPLSGHKKHINCLAWEPYHRDPECRKLASA 227
Query: 374 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRV 432
SGD ++W+ + + + GH + +++ L+ + S D T+++W G R
Sbjct: 228 SGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRT 287
Query: 433 LEGHEELVRCI 443
GH V I
Sbjct: 288 FSGHAHWVNNI 298
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 313 HCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK 368
H EAV+ L FS +G + + S D ++ +WD+ N T GH+ V V + D K
Sbjct: 118 HAEAVVSLNFSPDGAHLASGSGDTTVRLWDL---NTETPHFTCTGHKQWVLCVSWAPDGK 174
Query: 369 YIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQY----RD---RLVVSGSSDNTIR 420
+ S +I +W+ + + R L+GHK+ I CL + RD R + S S D R
Sbjct: 175 RLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCR 234
Query: 421 LWDIECGACLRVLEGHEELVRCIRFD-AKRIVSGAYDGKIKVW 462
+WD++ G CL + GH V +R+ A I + + D +K+W
Sbjct: 235 IWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMW 277
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/177 (26%), Positives = 80/177 (45%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII 288
+++ V L + D + SG D T+++WD + TGH VLC+ + D + +
Sbjct: 118 HAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLA 177
Query: 289 SGSSDSTVRVWDVNTGEMVNTLI--H--H--CEA--VLHLRFSNGMMVTCSKDRSIAVWD 340
SG ++ +WD TG+ + H H C A H + + S D +WD
Sbjct: 178 SGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWD 237
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIV-SASGDRTIKVWNTSSCEFVRTLNGH 396
V + + + GH AV V + ++ ++S DRT+K+W + RT +GH
Sbjct: 238 -VKLGQCLMN--IAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGH 291
Score = 94 (38.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 235 KGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG 290
+ VY + + D IVSG +D+T+KVW + + + L GH V + + D + SG
Sbjct: 418 QAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASG 477
Query: 291 SSDSTVRVW 299
D +++W
Sbjct: 478 GKDKVIKLW 486
Score = 78 (32.5 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 113 NF--DEKYIVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACLQY 154
NF D ++ S SGD T+++W NT + F T GHK+ + C+ +
Sbjct: 126 NFSPDGAHLASGSGDTTVRLWDLNTETPHF--TCTGHKQWVLCVSW 169
Score = 68 (29.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIR 169
+ SASGD ++W+ + + + GH + +++ L+ + S D T++
Sbjct: 224 LASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVK 275
Score = 58 (25.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQY----RD---RLVVSGSSDN 166
D K + S +I +W+ + + R L+GHK+ I CL + RD R + S S D
Sbjct: 172 DGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDG 231
Query: 167 TIRYRD 172
R D
Sbjct: 232 DCRIWD 237
Score = 50 (22.7 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETP 197
D + S S D T+ +WD LN +ETP
Sbjct: 130 DGAHLASGSGDTTVRLWD-LN-TETP 153
Score = 44 (20.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 129 KVWNTSSCEFVRTLNGHKRGIACLQYR-DRL-VVSGSSDNTIRYRD 172
KV + C ++ GH + L + D + SGS D T+R D
Sbjct: 104 KVRPVTRC--TSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWD 147
Score = 41 (19.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 172 DEFQ-IVSSSHDDTILIW 188
DE + +VS S D+T+ +W
Sbjct: 343 DEVESLVSCSDDNTLYLW 360
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 262 (97.3 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 94/368 (25%), Positives = 167/368 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ S SGD T++ W+ S+ T GH+ + + + + + SG + I D
Sbjct: 129 KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPS 188
Query: 175 ---QI--VSSSHDDTI--LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
Q+ + H I L W+ L+ + P + W +RI
Sbjct: 189 TGTQVGRTLTGHSKWITGLSWEPLHMN--PECRYVASSSKDGSVRV---WDTTAGRCERI 243
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV----LCLQY 282
+ +++ V CL++ D + S +D TIKVW + L GH V L Y
Sbjct: 244 --LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 301
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD 340
R +++TV D+ G + L + +L G +V+ S D ++ +W
Sbjct: 302 ALRTGAFEPAEATVNAQDLQ-GSL-KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWS 359
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ R + GH+A +N V F D + + SAS D++IK+W+ + +++ +L GH
Sbjct: 360 PAEDKKPLAR--MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 417
Query: 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ + + RL+VSGSSD+T+++WD++ L GH + V + + D +R+ SG
Sbjct: 418 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGG 477
Query: 455 YDGKIKVW 462
D +++W
Sbjct: 478 KDKCLRIW 485
Score = 237 (88.5 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 64/227 (28%), Positives = 113/227 (49%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D +++VWD + +C ++LTGHT SV CL++ + ++ S S D T++VW + G
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 280
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
+ TL H V + S + + +L+ + + N+V
Sbjct: 281 LCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRG 340
Query: 366 D-EKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL 421
+ +VS S D T+ +W+ + + + + GH+ I + + R+V S S D +I+L
Sbjct: 341 QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKL 400
Query: 422 WDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
WD G L L GH V I + D++ +VSG+ D +KVW++ A
Sbjct: 401 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 447
Score = 230 (86.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 59/209 (28%), Positives = 105/209 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GH+ +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 103 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVL 162
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-------KY 369
+ +S +G + K+ I +WD + ++ R L GH + + ++ +Y
Sbjct: 163 SISWSPDGKKLASGCKNGQILLWDPSTGTQVG--RTLTGHSKWITGLSWEPLHMNPECRY 220
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA 428
+ S+S D +++VW+T++ R L GH + + CL++ D L+ S S D TI++W G
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 280
Query: 429 CLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + + +GA++
Sbjct: 281 LCRTLQGHGHWVNTMALSTDYALRTGAFE 309
Score = 199 (75.1 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 66/245 (26%), Positives = 110/245 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ SG D T++ WD + GH VL + + D + + SG + + +WD +TG
Sbjct: 131 LASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTG 190
Query: 305 EMVN-TLIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
V TL H + + LH+ + + SKD S+ VWD + R+L GH
Sbjct: 191 TQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGR---CERILTGH 247
Query: 357 RAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGS 414
+V + + + + SAS DRTIKVW RTL GH + + D + +G+
Sbjct: 248 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 307
Query: 415 ---SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP 470
++ T+ D++ G+ + E +R +R+VSG+ D + +W+ P
Sbjct: 308 FEPAEATVNAQDLQ-GSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 366
Query: 471 RAPTT 475
A T
Sbjct: 367 LARMT 371
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 54/168 (32%), Positives = 83/168 (49%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++L H EAV+ + FS G + + S D ++ WD+ + T GHR V + +
Sbjct: 110 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW 166
Query: 366 --DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSS 415
D K + S + I +W+ S+ V RTL GH + I L + R V S S
Sbjct: 167 SPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 226
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D ++R+WD G C R+L GH + V C+R+ ++ S + D IKVW
Sbjct: 227 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 274
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + +
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG + I LWD G + R L GH + + + ++ + + S + DG ++
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 461 VWNLVAALDPRAPT----TTLCLR 480
VW+ A R T + CLR
Sbjct: 232 VWDTTAGRCERILTGHTQSVTCLR 255
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 237 (88.5 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 62/239 (25%), Positives = 122/239 (51%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D+ ++SG ++ IK+W+R +LQCI+ +T LC + +R ++ G+ ++++D
Sbjct: 426 DNIAVLSGAAES-IKIWNRSTLQCIRTMTCEYA--LCSFFVPGDRQVVIGTKTGKLQLYD 482
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD--MVSPNEITLRRVLVGH 356
+ +G ++ T+ H A+ L S VT D+S+ WD +V T +R+ V
Sbjct: 483 LASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQ 542
Query: 357 RAAVNV------VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ--YR 406
+ + V + ++K + + D T+K++ + +F +L GHK + C+ Y
Sbjct: 543 TRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYD 602
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
L+ +GS+D +++W ++ G C + L H++ V ++F K + D KIK W+
Sbjct: 603 GALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWD 661
Score = 198 (74.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 59/190 (31%), Positives = 96/190 (50%)
Query: 258 VWDRVSLQCIKVLTG--HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+WD + I +L G H + LC D + G D ++R++ + +GE T H
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
AV L++ G + + SKD I VWD++ NE L R L GH+ A+ F ++ +V
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDIIVWDVI--NESGLYR-LKGHKDAITQALFLREKNLLV 165
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
S+ D +K W+ + +T+ GH+ G+ + RL+ +G+SD+ +R WDI A
Sbjct: 166 SSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLI-TGASDSELRAWDI---A 221
Query: 429 CLRVLEGHEE 438
L +E EE
Sbjct: 222 YLEEIEDPEE 231
Score = 196 (74.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 69/287 (24%), Positives = 131/287 (45%)
Query: 113 NFDEKYIVSASGD-RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR 171
+F I SG +IK+WN S+ + +RT+ + DR VV G+ ++
Sbjct: 422 SFSSDNIAVLSGAAESIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQLY 481
Query: 172 DEFQIVSSSHDDTILIWD--FLNYSETPIQXXXXXXXXXXXXX------IENNWRMGKFL 223
D + S + +T+ D + S +P Q +++ K L
Sbjct: 482 D---LASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRL 538
Query: 224 LQRINCRSENSKGVYCLQYD-DHKIVS-GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
+ + + V C+ Y + K+++ L D T+K++ +L+ L GH V+C+
Sbjct: 539 SVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMD 598
Query: 282 --YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIA 337
YD +I +GS+D V++W ++ G+ +L H ++V++L+F + + T KDR I
Sbjct: 599 ISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIK 658
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
WD + + L GH + + Y+VS+S D+++++W
Sbjct: 659 QWDADKFEHV---QTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 180 (68.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 55/240 (22%), Positives = 112/240 (46%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDV 301
D ++V G + ++++D S ++ + H G++ L L D+R ++G +D +V+ WD
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 302 NTGEMVNTL-----------IHHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEIT 348
+ N+ + E VL + +S N ++ S D ++ ++ V +
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIF-YVDTLKFF 584
Query: 349 LRRVLVGHRAAVNVVD--FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY- 405
L L GH+ V +D +D I + S DR +K+W + ++L H + L++
Sbjct: 585 LS--LYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFV 642
Query: 406 -RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
+ L + D I+ WD + ++ LEGH + + C+ +VS ++D +++W
Sbjct: 643 PKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/192 (28%), Positives = 94/192 (48%)
Query: 296 VRVWDVNTGEMVNTL--IHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVS-PNEITLRR 351
V +WD+ GE + L + H E +G+ + +D SI ++ ++S +T
Sbjct: 47 VFIWDLRKGEKILILQGLKH-EVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN- 104
Query: 352 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR 408
GH+AAV + +D+ + S S D I VW+ + + L GHK I L R++
Sbjct: 105 ---GHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREK 161
Query: 409 -LVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWNLV 465
L+VS D ++ WD++ C + + GH V + + KR+++GA D +++ W+ +
Sbjct: 162 NLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD-I 220
Query: 466 AAL----DPRAP 473
A L DP P
Sbjct: 221 AYLEEIEDPEEP 232
Score = 168 (64.2 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 56/204 (27%), Positives = 97/204 (47%)
Query: 240 LQYDDHKIVSGLRDNTIKVWD------------RVSLQCIKVLTGHTGSVLCLQY--DER 285
L D V+G D ++K WD R+S++ + L VLC+ Y +++
Sbjct: 504 LSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDE-EVLCVSYSPNQK 562
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL--HLRFSNGMMVTCSKDRSIAVWDMVS 343
++ D TV+++ V+T + +L H V+ + + ++ T S DR++ +W +
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDF 622
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIA 401
+ + L H +V + F K ++ +G DR IK W+ E V+TL GH + I
Sbjct: 623 GD---CHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIW 679
Query: 402 CLQYRDR--LVVSGSSDNTIRLWD 423
CL VVS S D ++RLW+
Sbjct: 680 CLAISPSGDYVVSSSHDKSLRLWE 703
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTV 296
C D + G D +I+++ +S + GH +V L+YD+ + SGS D+ +
Sbjct: 72 CPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDI 131
Query: 297 RVWDVNTGEMVNTLIHHCEAV---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWDV + L H +A+ L LR N ++V+ KD + WD+ + + + +
Sbjct: 132 IVWDVINESGLYRLKGHKDAITQALFLREKN-LLVSSGKDTMVKWWDLDTQHCF---KTV 187
Query: 354 VGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCE 388
VGHR V V+ +EK +++ + D ++ W+ + E
Sbjct: 188 VGHRTEVWGLVLVSEEKRLITGASDSELRAWDIAYLE 224
Score = 146 (56.5 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 293 DSTVRVWDVNTGEMVNT--LIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
D RV ++ T + + +IH + L F N ++ S S+ V + IT
Sbjct: 351 DEIQRVTNIKTSAKIKSFDVIHSPQGELKAVFLLQNNLVELYSVYPSVPASQPVRTSRIT 410
Query: 349 LRRVLVGHRAAVNVVDFDEKYIVSASGD-RTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
+ GHR+ V + F I SG +IK+WN S+ + +RT+ + D
Sbjct: 411 IG----GHRSDVRTLSFSSDNIAVLSGAAESIKIWNRSTLQCIRTMTCEYALCSFFVPGD 466
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
R VV G+ ++L+D+ G L ++ H+ + + D + V+G D +K W+
Sbjct: 467 RQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFE 526
Query: 466 AALDPRAPTTTLCLR 480
D + L ++
Sbjct: 527 LVKDENSTQKRLSVK 541
Score = 136 (52.9 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 50/213 (23%), Positives = 101/213 (47%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH V L + D ++SG+++S +++W+ +T + + T+ CE L F G +
Sbjct: 413 GHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQV 469
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW----- 382
V +K + ++D+ S N + G ++++ D++ V+ D+++K W
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSP-DQRGFVTGGADKSVKFWDFELV 528
Query: 383 ---NTS----SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL 433
N++ S + RTL + + C+ Y +L+ D T++++ ++ L
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEE-VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 434 EGHEELVRC--IRFDAKRIVSGAYDGKIKVWNL 464
GH+ V C I +D I +G+ D +K+W L
Sbjct: 588 YGHKLPVICMDISYDGALIATGSADRNVKIWGL 620
Score = 79 (32.9 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 162
L+ + L P+ D ++ D +I++++ S E T NGHK + L+Y D+L G
Sbjct: 64 LKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKY-DQL---G 119
Query: 163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194
++ S S D I++WD +N S
Sbjct: 120 G-----------RLASGSKDTDIIVWDVINES 140
Score = 67 (28.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 116 EKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYR 171
EK ++ +SG D +K W+ + +T+ GH+ G+ + RL+ +G+SD+ +R
Sbjct: 160 EKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLI-TGASDSELRAW 218
Query: 172 D 172
D
Sbjct: 219 D 219
Score = 63 (27.2 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR-LVVSGSSDNTIRYRD 172
+ S S D I VW+ + + L GHK I L R++ L+VS D +++ D
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWD 177
Score = 44 (20.5 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 6/26 (23%), Positives = 17/26 (65%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIK 268
++ ++++G D+ ++ WD L+ I+
Sbjct: 202 EEKRLITGASDSELRAWDIAYLEEIE 227
Score = 42 (19.8 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 130 VWNTSSCEFVRTLNGHKRGIACL-QYRDRLVVS-GSSDNTIR 169
+W+ E + L G K + CL D L ++ G D +IR
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIR 90
Score = 39 (18.8 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 5/23 (21%), Positives = 14/23 (60%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCE 137
+EK +++ + D ++ W+ + E
Sbjct: 202 EEKRLITGASDSELRAWDIAYLE 224
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 262 (97.3 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 69/224 (30%), Positives = 112/224 (50%)
Query: 249 SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEM 306
SG D IK+WD S Q LTGH SV ++ R + SG D V+ WD+ ++
Sbjct: 201 SGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKV 260
Query: 307 VNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV-NVV 363
+ H AV L + S ++VTC++D + VWDM + ++ GH V +VV
Sbjct: 261 IRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQV---HCFAGHTNTVADVV 317
Query: 364 -DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 420
+ +++AS D T+++W+ ++ + TL HK+ + L RL S S DN I+
Sbjct: 318 CQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDN-IK 376
Query: 421 LWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWN 463
W + G ++ L GH ++ + D +VSGA +G + W+
Sbjct: 377 QWKLPKGEFMQNLSGHNAIINTLSSNDDGVVVSGADNGSLCFWD 420
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V +GHTG V + + + SG +D +++WD+ +G++ +L H +V ++ S
Sbjct: 178 RVASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPR 237
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + + +D+ + WD+ N++ R GH +AV + +V+ + D T +V
Sbjct: 238 HPFLFSGGEDKQVKCWDL-EYNKVI--RHYHGHLSAVQALSVHPSLDVLVTCARDSTARV 294
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V GH +A + Q D V++ S D T+RLWD+ G + L H++
Sbjct: 295 WDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKS 354
Query: 440 VRCIRFDAK-RIVSGAYDGKIKVWNL 464
VR + + + + A IK W L
Sbjct: 355 VRALTIHPRLNMFASASPDNIKQWKL 380
Score = 204 (76.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/195 (27%), Positives = 91/195 (46%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTG 304
+ SG D +K WD + I+ GH +V L V+++ + DST RVWD+ T
Sbjct: 241 LFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTK 300
Query: 305 EMVNTLIHHCEAVLHL--RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
V+ H V + + + ++T S D ++ +WD+ + + L H+ +V
Sbjct: 301 AQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMC---TLTHHKKSVRA 357
Query: 363 VDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTI 419
+ + SAS D IK W EF++ L+GH I L D +VVSG+ + ++
Sbjct: 358 LTIHPRLNMFASASPDN-IKQWKLPKGEFMQNLSGHNAIINTLSSNDDGVVVSGADNGSL 416
Query: 420 RLWDIECGACLRVLE 434
WD G C + ++
Sbjct: 417 CFWDWRSGFCFQKIQ 431
Score = 166 (63.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 55/194 (28%), Positives = 99/194 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV---LCLQYDERVIISGSSDSTVRVWDVNT 303
+V+ RD+T +VWD + + GHT +V +C D +VI + S D+TVR+WD+
Sbjct: 283 LVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVI-TASHDATVRLWDLAA 341
Query: 304 GEMVNTLIHHCEAV----LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
G + TL HH ++V +H R + M + S D +I W + P ++ L GH A
Sbjct: 342 GRSMCTLTHHKKSVRALTIHPRLN--MFASASPD-NIKQWKL--PKGEFMQN-LSGHNAI 395
Query: 360 VNVVDF-DEKYIVSASGDRTIKVWNTSS--C-EFVRTLN--GH---KRGI--ACLQYRDR 408
+N + D+ +VS + + ++ W+ S C + ++T G + GI +C
Sbjct: 396 INTLSSNDDGVVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGL 455
Query: 409 LVVSGSSDNTIRLW 422
+++ +D TI+++
Sbjct: 456 RLITAEADKTIKMY 469
Score = 156 (60.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFV 390
DR I +WD+ S L+ L GH ++V V + ++ S D+ +K W+ + +
Sbjct: 205 DRIIKIWDLASGQ---LKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVI 261
Query: 391 RTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR---CIRF 445
R +GH + L L +V+ + D+T R+WD+ A + GH V C
Sbjct: 262 RHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSV 321
Query: 446 DAKRIVSGAYDGKIKVWNLVA 466
D + +++ ++D +++W+L A
Sbjct: 322 DPQ-VITASHDATVRLWDLAA 341
Score = 154 (59.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 62/282 (21%), Positives = 123/282 (43%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRD-E 173
++ S DR IK+W+ +S + +L GH + ++ R + SG D ++ D E
Sbjct: 197 QWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLE 256
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSEN 233
+ V + + L S P + W M +++C + +
Sbjct: 257 YNKVIRHYHGHLSAVQAL--SVHPSLDVLVTCARDSTARV---WDMRT--KAQVHCFAGH 309
Query: 234 SK---GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV-IIS 289
+ V C Q D ++++ D T+++WD + + + LT H SV L R+ + +
Sbjct: 310 TNTVADVVC-QSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFA 368
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSP--- 344
+S ++ W + GE + L H A+++ SN G++V+ + + S+ WD S
Sbjct: 369 SASPDNIKQWKLPKGEFMQNLSGH-NAIINTLSSNDDGVVVSGADNGSLCFWDWRSGFCF 427
Query: 345 NEITLRRV--LVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
+I + + A + FD+ +++A D+TIK++
Sbjct: 428 QKIQTKPQPGSIESEAGIYASCFDKTGLRLITAEADKTIKMY 469
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 349 LRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
L RV GH V VD + ++ S DR IK+W+ +S + +L GH + ++
Sbjct: 176 LYRVASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVS 235
Query: 407 DR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
R + SG D ++ WD+E +R GH V+ + +V+ A D +VW
Sbjct: 236 PRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVW 295
Query: 463 NL 464
++
Sbjct: 296 DM 297
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 250 (93.1 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 68/252 (26%), Positives = 112/252 (44%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + +G D ++W + L H G + L+++++ I+
Sbjct: 220 SNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFIL 278
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + SN +CS D I V + I
Sbjct: 279 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQERPI 338
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 339 ---KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKW 395
Query: 406 RDR------------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV 451
L S S D+T+RLWD E GAC+ L H+E V + F D + +
Sbjct: 396 SPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLA 455
Query: 452 SGAYDGKIKVWN 463
SG++D + +WN
Sbjct: 456 SGSFDKCVHIWN 467
Score = 129 (50.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 47/236 (19%), Positives = 97/236 (41%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISGSSDSTVRVWDVNTGE 305
I+S D T +WD + + + H+ L + + S S+D + V +
Sbjct: 277 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQER 336
Query: 306 MVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ T H V +++ + ++ +CS D ++ +W M + T L H + +
Sbjct: 337 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSM---KQDTCVHDLQAHSKEIYTI 393
Query: 364 DF----------DEKYIV--SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RL 409
+ + ++ SAS D T+++W+ + TL H+ + + + R
Sbjct: 394 KWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRH 453
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNL 464
+ SGS D + +W+ + GA + G + C ++ + A DG + V +L
Sbjct: 454 LASGSFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSVCVLDL 509
Score = 54 (24.1 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + G + + C++ + V S ++ + E +
Sbjct: 180 LASGSGDSTARIWNLSES----STGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 235
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 236 LATGSYDGFARIW 248
Score = 48 (22.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 222 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 275
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 276 ---------F-ILSAGVDKTTIIWD 290
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
+I+SA D+T +W+ + E
Sbjct: 276 FILSAGVDKTTIIWDAHTGE 295
Score = 38 (18.4 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 161 LRGHESEVFICAWNPVSDLLASGSGDSTAR 190
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 267 (99.0 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 68/252 (26%), Positives = 128/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C+ F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 232 (86.7 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 60/231 (25%), Positives = 112/231 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTG 304
+V+G D I+V++ +L+ + + H+ + C+ + I++ S D +++WD +
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 305 EMVNTLIH-HCEAVLHLRFS---NGMMVTCSKDRSIAVWDM--VSPNEITLRRVLVGHRA 358
+ + H V+ + + N + S DR+I VW + SPN TL GH
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN-FTLE----GHEK 186
Query: 359 AVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVS 412
VN +D+ D+ Y++S + DR +K+W+ + V+TL GH + ++C+ + L +++
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIIT 246
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV 461
GS D T+R+W L E V C+ + + G +G I V
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 297
Score = 177 (67.4 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 57/226 (25%), Positives = 100/226 (44%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C+ +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
Score = 122 (48.0 bits), Expect = 0.00060, P = 0.00060
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR--Y 170
D+ Y++S + DR +K+W+ + V+TL GH + ++C+ + L +++GS D T+R +
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWH 257
Query: 171 RDEFQIVSSSHDDTILIW 188
+++ S+ + +W
Sbjct: 258 SSTYRLESTLNYGMERVW 275
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 242 (90.2 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 68/256 (26%), Positives = 117/256 (45%)
Query: 226 RINCRSENSKGVYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY- 282
R C + V C+Q+ H + SG RD T+ +W V HT +V + +
Sbjct: 54 RAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFS 113
Query: 283 -DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDRSIAVW 339
D + +++ S D T++VW V+ + + +L H V RFS +G ++ + S D+++ +W
Sbjct: 114 SDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW 173
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D S I H N V+F I +A D+T+KVW+ ++ H
Sbjct: 174 DKTSRECI---HSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHT 230
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSG 453
+ L + +++ S+D+T+++ D+ G L L GH+ C+ F SG
Sbjct: 231 AAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASG 290
Query: 454 AYDGKIKVW--NLVAA 467
D ++ VW N AA
Sbjct: 291 GSDEQVMVWKTNFSAA 306
Score = 233 (87.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 79/310 (25%), Positives = 125/310 (40%)
Query: 105 RDFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVS 161
RD I+ + + ++K + S S D +K+W+ L GHK + C+Q+ LV S
Sbjct: 20 RDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVAS 79
Query: 162 GSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG- 220
GS D T+ + S + T+ W +
Sbjct: 80 GSRDKTVC----LWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR 135
Query: 221 -KFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV 277
KFL S++ V C ++ D I S D T+K+WD+ S +CI H G
Sbjct: 136 QKFLFSL----SQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA 191
Query: 278 LCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKD 333
+++ I + +D TV+VWDV ++ H AV L F S ++T S D
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASND 251
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNT--SSCEF 389
++ + D++ E L L GH+ V F + S D + VW T S+ ++
Sbjct: 252 STLKILDLL---EGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAADY 308
Query: 390 VRTLNGHKRG 399
L HK G
Sbjct: 309 DGVLKTHKSG 318
Score = 232 (86.7 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 58/203 (28%), Positives = 102/203 (50%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV 328
GH ++ + + +++ + SGS DS +++W + L+ H +AV+ ++FS +G +V
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 329 TC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
S+D+++ +W E T V H A V V F D + +V+AS D+TIKVW
Sbjct: 78 ASGSRDKTVCLWVPSVKGEST---VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVH 134
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+F+ +L+ H + C ++ RL+ S S D T++LWD C+ H +
Sbjct: 135 RQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHV 194
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F I + D +KVW++
Sbjct: 195 EFHPSGTCIAAAGTDKTVKVWDV 217
Score = 209 (78.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/232 (26%), Positives = 111/232 (47%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNT 303
++ SG D+ +K+W L GH +V+C+Q+ ++ SGS D TV +W +
Sbjct: 34 QLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSV 93
Query: 304 -GEMVNTLIH-HCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
GE +T+ H V + FS+ G +VT S D++I VW V + L H
Sbjct: 94 KGE--STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWT-VHRQKFLFS--LSQHINW 148
Query: 360 VNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSS 415
V F D + I SAS D+T+K+W+ +S E + + H +++ + + +
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGT 208
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
D T+++WD+ L+ + H V + F +++ + D +K+ +L+
Sbjct: 209 DKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLL 260
Score = 168 (64.2 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+L R GHR A+ VDF ++K + S S D +K+W+ L GHK + C+Q+
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQF 70
Query: 406 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV 461
LV SGS D T+ LW V + H VR + F D + +V+ + D IKV
Sbjct: 71 SPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKV 130
Query: 462 WNL 464
W +
Sbjct: 131 WTV 133
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 235 (87.8 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 63/239 (26%), Positives = 120/239 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D+ I+S D+ IK+W+R +LQCI+ + LC + +R ++ G+ ++++D
Sbjct: 426 DNIAILSAAADS-IKIWNRSTLQCIRTMACEYA--LCSFFVPGDRQVVIGTKTGKLQLYD 482
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD--MVSPNEITLRRVLVGH 356
+ +G ++ T+ H A+ L S VT D+S+ WD +V T +R+ V
Sbjct: 483 LASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQ 542
Query: 357 RAAVNV------VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ--YR 406
+ + V + ++K + + D T+K++ + +F +L GHK + C+ Y
Sbjct: 543 TRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYD 602
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
L+ +GS+D +++W ++ G C + L H++ V +RF K + D KIK W+
Sbjct: 603 GALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWD 661
Score = 208 (78.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 74/284 (26%), Positives = 133/284 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D I+SA+ D +IK+WN S+ + +RT+ + DR VV G+ ++ D
Sbjct: 426 DNIAILSAAAD-SIKIWNRSTLQCIRTMACEYALCSFFVPGDRQVVIGTKTGKLQLYD-- 482
Query: 175 QIVSSSHDDTILIWD--FLNYSETPIQXXXXXXXXXXXXX------IENNWRMGKFLLQR 226
+ S + +TI D + S +P Q +++ K L +
Sbjct: 483 -LASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVK 541
Query: 227 INCRSENSKGVYCLQYD-DHKIVS-GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--Y 282
+ + V C+ Y + K+++ L D T+K++ +L+ L GH V+C+ Y
Sbjct: 542 QTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISY 601
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
D +I +GS+D V++W ++ G+ +L H ++V++LRF + + T KDR I WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWD 661
Query: 341 MVSPNEITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVW 382
I + L GH + V Y+VS+S D+++++W
Sbjct: 662 ADKFEHI---QTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 195 (73.7 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 59/190 (31%), Positives = 97/190 (51%)
Query: 258 VWDRVSLQCIKVLTG--HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+WD + I +L G H + LC D + G D ++R++ + +GE T H
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVS 372
A+ L++ G + + SKD I VWD++ NE L R L GH+ A+ F EK ++
Sbjct: 109 AITSLKYDQLGGRLASGSKDTDIIVWDVI--NESGLYR-LKGHKDAITQALFLREKNLLV 165
Query: 373 ASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
SG D +K W+ + +T+ GH+ G+ + RL+ +G+SD+ +R WDI +
Sbjct: 166 TSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLI-TGASDSELRAWDI---S 221
Query: 429 CLRVLEGHEE 438
L+ +E EE
Sbjct: 222 YLQEIEDPEE 231
Score = 181 (68.8 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 55/240 (22%), Positives = 112/240 (46%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDV 301
D ++V G + ++++D S ++ + H G++ L L D+R ++G +D +V+ WD
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 302 NTGEMVNTL-----------IHHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEIT 348
+ N+ + E VL + +S N ++ S D ++ ++ V +
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIF-YVDTLKFF 584
Query: 349 LRRVLVGHRAAVNVVD--FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY- 405
L L GH+ V +D +D I + S DR +K+W + ++L H + L++
Sbjct: 585 LS--LYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFV 642
Query: 406 -RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
+ L + D I+ WD + ++ LEGH + + C+ +VS ++D +++W
Sbjct: 643 PKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 171 (65.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 51/191 (26%), Positives = 92/191 (48%)
Query: 296 VRVWDVNTGEMVNTL--IHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVS-PNEITLRR 351
V +WD+ GE + L + H E +G+ + +D SI ++ ++S +T
Sbjct: 47 VFIWDLRKGEKILILQGLKH-EVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN- 104
Query: 352 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR 408
GH+AA+ + +D+ + S S D I VW+ + + L GHK I L R++
Sbjct: 105 ---GHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREK 161
Query: 409 -LVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWN-- 463
L+V+ D ++ WD++ C + + GH V + + KR+++GA D +++ W+
Sbjct: 162 NLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDIS 221
Query: 464 -LVAALDPRAP 473
L DP P
Sbjct: 222 YLQEIEDPEEP 232
Score = 166 (63.5 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 240 LQYDDHKIVSGLRDNTIKVWD------------RVSLQCIKVLTGHTGSVLCLQY--DER 285
L D V+G D ++K WD R+S++ + L VLC+ Y +++
Sbjct: 504 LSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDE-EVLCVSYSPNQK 562
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL--HLRFSNGMMVTCSKDRSIAVWDMVS 343
++ D TV+++ V+T + +L H V+ + + ++ T S DR++ +W +
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDF 622
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIA 401
+ + L H +V + F K ++ +G DR IK W+ E ++TL GH + I
Sbjct: 623 GD---CHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 402 CLQYRDR--LVVSGSSDNTIRLWD 423
CL VVS S D ++RLW+
Sbjct: 680 CLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/154 (27%), Positives = 77/154 (50%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTV 296
C D + G D +I+++ +S + GH ++ L+YD+ + SGS D+ +
Sbjct: 72 CPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDI 131
Query: 297 RVWDVNTGEMVNTLIHHCEAV---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWDV + L H +A+ L LR N ++VT KD + WD+ + + + +
Sbjct: 132 IVWDVINESGLYRLKGHKDAITQALFLREKN-LLVTSGKDTMVKWWDLDTQHCF---KTM 187
Query: 354 VGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTS 385
VGHR V V+ +EK +++ + D ++ W+ S
Sbjct: 188 VGHRTEVWGLVLVSEEKRLITGASDSELRAWDIS 221
Score = 152 (58.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 51/196 (26%), Positives = 88/196 (44%)
Query: 293 DSTVRVWDVNTGEMVNT--LIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
D RV ++ T + + LIH + L F N ++ S + S V N IT
Sbjct: 351 DEIQRVANIKTSAKIKSFDLIHTPQGELKAVFLLQNNLVELYSLNASTPGPQPVRTNRIT 410
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
+ GHR+ V + F D I+SA+ D +IK+WN S+ + +RT+ +
Sbjct: 411 IG----GHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTMACEYALCSFFVPG 465
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
DR VV G+ ++L+D+ G L ++ H+ + + D + V+G D +K W+
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 465 VAALDPRAPTTTLCLR 480
D + L ++
Sbjct: 526 ELVKDENSTQKRLSVK 541
Score = 135 (52.6 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 51/213 (23%), Positives = 100/213 (46%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH V L + D I+S ++DS +++W+ +T + + T+ CE L F G +
Sbjct: 413 GHRSDVRTLSFSSDNIAILSAAADS-IKIWNRSTLQCIRTMA--CEYALCSFFVPGDRQV 469
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW----- 382
V +K + ++D+ S N + G ++++ D++ V+ D+++K W
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSP-DQRGFVTGGADKSVKFWDFELV 528
Query: 383 ---NTS----SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL 433
N++ S + RTL + + C+ Y +L+ D T++++ ++ L
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEE-VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 434 EGHEELVRC--IRFDAKRIVSGAYDGKIKVWNL 464
GH+ V C I +D I +G+ D +K+W L
Sbjct: 588 YGHKLPVICMDISYDGALIATGSADRNVKIWGL 620
Score = 80 (33.2 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 162
L+ + L P+ D ++ D +I++++ S E T NGHK I L+Y D+L G
Sbjct: 64 LKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKY-DQL---G 119
Query: 163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194
++ S S D I++WD +N S
Sbjct: 120 G-----------RLASGSKDTDIIVWDVINES 140
Score = 67 (28.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 116 EKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYR 171
EK ++ SG D +K W+ + +T+ GH+ G+ + RL+ +G+SD+ +R
Sbjct: 160 EKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLI-TGASDSELRAW 218
Query: 172 D 172
D
Sbjct: 219 D 219
Score = 60 (26.2 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR-LVVSGSSDNTIRYRD 172
+ S S D I VW+ + + L GHK I L R++ L+V+ D +++ D
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWD 177
Score = 42 (19.8 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 130 VWNTSSCEFVRTLNGHKRGIACL-QYRDRLVVS-GSSDNTIR 169
+W+ E + L G K + CL D L ++ G D +IR
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIR 90
Score = 40 (19.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 115 DEKYIVSASGDRTIKVWNTS 134
+EK +++ + D ++ W+ S
Sbjct: 202 EEKRLITGASDSELRAWDIS 221
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 218 (81.8 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 58/206 (28%), Positives = 102/206 (49%)
Query: 270 LTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM- 326
L GHTG + C ++ D+ II+ S D+T +WD+ TG+ H V+ L + +G
Sbjct: 95 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 154
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKY-IVSASGDRTIKVWNT 384
V+ + D SI +WD+ + R+ +GH + +N V F Y + S D T ++++
Sbjct: 155 FVSGACDASIKLWDV---RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 211
Query: 385 SSCEFVRTLNGHKR---GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
+ + + + H GI + + RL+++G D +WD G VL GH+
Sbjct: 212 RADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 270
Query: 440 VRCIRF--DAKRIVSGAYDGKIKVWN 463
V C+ D + +G++D +K+WN
Sbjct: 271 VSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 196 (74.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 268 KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-N 324
+ L GH + + + D R+++S S D + +WD T V+ + V+ ++ +
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 64
Query: 325 GMMVTCSK-DRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKV 381
G V C D +++ + + + + R L GH ++ F D+ I+++SGD T +
Sbjct: 65 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 124
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + + GH + L R VSG+ D +I+LWD+ C + GHE
Sbjct: 125 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 184
Query: 440 VRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
+ + F + +G+ D ++++L A
Sbjct: 185 INAVAFFPNGYAFTTGSDDATCRLFDLRA 213
Score = 178 (67.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 69/300 (23%), Positives = 126/300 (42%)
Query: 140 RTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETP 197
RTL GH I + + RL+VS S D + D + + H + + + P
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAP 63
Query: 198 IQXXXXXXXXXXXXXIEN-NWRMGKFLLQRINCRSENSKG-VYCLQY-DDHKIVSGLRDN 254
I + R G R++ G + C ++ DD++I++ D
Sbjct: 64 SGNFVACGGLDNICSIYSLKTREGNV---RVSRELPGHTGYLSCCRFLDDNQIITSSGDT 120
Query: 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
T +WD + Q GH+G V+ L D R +SG+ D+++++WDV T I
Sbjct: 121 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 180
Query: 313 HCEAVLHLRF-SNGMMVTC-SKDRSIAVWDMVSPNEITLR---RVLVGHRAAVNVVDFDE 367
H + + F NG T S D + ++D+ + E+ + ++ G + V F
Sbjct: 181 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG----ITSVAFSR 236
Query: 368 --KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 423
+ +++ D +W+ + L GH ++CL D V +GS D+ +++W+
Sbjct: 237 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 45 (20.9 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDN 166
D + +VSAS D + +W++ + V + + Y V G DN
Sbjct: 22 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDN 75
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 260 (96.6 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 70/225 (31%), Positives = 114/225 (50%)
Query: 249 SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEM 306
+G D TIK+WD S LTGH +V L R + S D V+ WD+ T ++
Sbjct: 180 TGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKV 239
Query: 307 VNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR---AAVN 361
+ H V L+ + ++VT +D VWDM + + VL GH+ A++
Sbjct: 240 IRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNV---HVLSGHKSTVASLA 296
Query: 362 VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRDRLV-VSGSSDNTI 419
V +FD + +V+ S D TI++W+ ++ + + TL HK+ + L + D SGSSDN I
Sbjct: 297 VQEFDPQ-VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDN-I 354
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVWN 463
+ W GA + EGH +V + ++ ++ SGA +G + W+
Sbjct: 355 KHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGADNGSMCFWD 399
Score = 252 (93.8 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 65/206 (31%), Positives = 107/206 (51%)
Query: 267 IKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
++V++GH G V C+ + + +G+ D T+++WD+ +G + TL H V L S
Sbjct: 156 MRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSP 215
Query: 324 -NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIK 380
+ + +C +D+ + WD+ + N++ R GH + V + +V+A D +
Sbjct: 216 RHPYLFSCGEDKMVKCWDLET-NKVI--RHYHGHLSGVYALKLHPTLDVLVTAGRDAVAR 272
Query: 381 VWNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438
VW+ + + V L+GHK +A L Q D VV+GS D+TIRLWD+ G L L H++
Sbjct: 273 VWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKK 332
Query: 439 LVRCIRF--DAKRIVSGAYDGKIKVW 462
VR + D SG+ D IK W
Sbjct: 333 TVRALSLHPDEFTFASGSSDN-IKHW 357
Score = 182 (69.1 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 45/150 (30%), Positives = 74/150 (49%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N T + DR+I +WD+ S L+ L GH A V V Y+ S D+ +K
Sbjct: 175 NQWFCTGAGDRTIKIWDLASG---VLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKC 231
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + + +R +GH G+ L+ L +V+ D R+WD+ + VL GH+
Sbjct: 232 WDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKST 291
Query: 440 VRCI---RFDAKRIVSGAYDGKIKVWNLVA 466
V + FD + +V+G+ D I++W+L A
Sbjct: 292 VASLAVQEFDPQ-VVTGSMDSTIRLWDLAA 320
Score = 180 (68.4 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 50/182 (27%), Positives = 80/182 (43%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + + I+ GH V L+ V+++ D+ RVWD+ T + V+ L
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVL 285
Query: 311 IHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D 366
H V L + +VT S D +I +WD+ + +T L H+ V + D
Sbjct: 286 SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLT---TLTHHKKTVRALSLHPD 342
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE 425
E S S D IK W F+ GH + L D ++ SG+ + ++ WD +
Sbjct: 343 EFTFASGSSDN-IKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGADNGSMCFWDWK 401
Query: 426 CG 427
G
Sbjct: 402 SG 403
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 54/170 (31%), Positives = 82/170 (48%)
Query: 236 GVYCLQYD---DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL---QYDERVIIS 289
GVY L+ D + +G RD +VWD + Q + VL+GH +V L ++D +V+ +
Sbjct: 249 GVYALKLHPTLDVLVTAG-RDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVV-T 306
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEI 347
GS DST+R+WD+ G+ + TL HH + V L L + S D +I W P
Sbjct: 307 GSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSD-NIKHWKF--PEGA 363
Query: 348 TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ GH A VN + + ++ + D N S C F +GHK
Sbjct: 364 FMGN-FEGHNAIVNTLSINSDNVMFSGAD------NGSMC-FWDWKSGHK 405
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 85/380 (22%), Positives = 159/380 (41%)
Query: 27 LTISVSSASPQLPPMTILYDPNRKKEPAPQFAS-EK-EMCFKYFDKWSEQDQIDFVENLL 84
LT+ S +P +T DPN+K S EK + + + + + Q V+ L
Sbjct: 82 LTVRADSENPSSQVITKFSDPNKKIAGQVSMQSLEKIKGVPEAAHRIAGESQASLVKRTL 141
Query: 85 SRMCHYQHGHINTYLKPMLQRDF-----ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV 139
+ + H L ++ + + P ++ + +GDRTIK+W+ +S
Sbjct: 142 AEQIRPEW-HAPWTLMRVISGHLGWVRCVDVEPG--NQWFCTGAGDRTIKIWDLASGVLK 198
Query: 140 RTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD-EF-QIVSSSHDDTILIWDFLNYS 194
TL GH RG+A + R + S D ++ D E +++ H ++ +
Sbjct: 199 LTLTGHIATVRGLA-VSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHP 257
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCL--QYDDHKIVSGLR 252
+ + W M Q ++ S + V L Q D ++V+G
Sbjct: 258 TLDV------LVTAGRDAVARVWDMRT--RQNVHVLSGHKSTVASLAVQEFDPQVVTGSM 309
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
D+TI++WD + + + LT H +V L L DE SGSSD+ ++ W G +
Sbjct: 310 DSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGNF 368
Query: 311 IHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEIT-LRRVL----VGHRAAVNVVD 364
H V L S+ +M + + + S+ WD S ++ L+ V+ + A +
Sbjct: 369 EGHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASS 428
Query: 365 FDEK--YIVSASGDRTIKVW 382
FD+ +++ D+++K++
Sbjct: 429 FDKTGLRLITCEADKSVKIY 448
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 266 (98.7 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 69/252 (27%), Positives = 127/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +I+G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH
Sbjct: 128 W--EKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHD 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C+ F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 228 (85.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 60/229 (26%), Positives = 110/229 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTG 304
+++G D I+V++ +L+ + + H+ + C+ + I++ S D +++WD
Sbjct: 72 VITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKK 131
Query: 305 EMVNTLIH-HCEAVLHLRFS---NGMMVTCSKDRSIAVWDM--VSPNEITLRRVLVGHRA 358
+ + H V+ + + N + S DR+I VW + SPN TL GH
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN-FTLE----GHDK 186
Query: 359 AVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVS 412
VN +D+ D+ Y++S + DR +K+W+ + V+TL GH + ++C+ + L +++
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIIT 246
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAYD-GKI 459
GS D T+R+W L E V C+ V+ YD G I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSI 295
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 56/226 (24%), Positives = 100/226 (44%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++++ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 EKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C+ +
Sbjct: 181 LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSV 286
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKV 381
S M+ + S+ VW+ + + V + RA+ V + ++++ + D I+V
Sbjct: 26 SEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVAR--KNWVITGADDMQIRV 83
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEE 438
+N ++ E V H I C+ +++ S D I+LWD E +C +V EGH
Sbjct: 84 FNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTH 143
Query: 439 LVRCIRFDAK---RIVSGAYDGKIKVWNL 464
V I + K + S + D IKVW L
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQL 172
Score = 122 (48.0 bits), Expect = 0.00062, P = 0.00062
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR--Y 170
D+ Y++S + DR +K+W+ + V+TL GH + ++C+ + L +++GS D T+R +
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWH 257
Query: 171 RDEFQIVSSSHDDTILIW 188
+++ S+ + +W
Sbjct: 258 SSTYRLESTLNYGMERVW 275
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 260 (96.6 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 94/368 (25%), Positives = 168/368 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ S SGD T++ W+ S+ T GH+ + + + + + SG + I D
Sbjct: 127 KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPS 186
Query: 175 ---QI--VSSSHDD--TILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
Q+ + H T L W+ L+ + P + W +RI
Sbjct: 187 TGKQVGRALAGHSKWITALSWEPLHAN--PECRYVASSSKDGSVRV---WDTTAGRCERI 241
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV----LCLQY 282
+ +++ V CL++ D + S +D TIKVW + L GH V L Y
Sbjct: 242 --LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 299
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD 340
R ++++V D+ G + L + +L G+ +V+ S D ++ +W
Sbjct: 300 ALRTGAFEPAEASVNAQDLR-GSL-QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWS 357
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ R + GH+A +N V F D + I SAS D++IK+W+ + +++ +L GH
Sbjct: 358 PAEDKKPLAR--MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ + + RL+VSGSSD+T+++WD++ L GH + V + + D +R+ SG
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGG 475
Query: 455 YDGKIKVW 462
D +++W
Sbjct: 476 KDKCLRIW 483
Score = 234 (87.4 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 66/231 (28%), Positives = 116/231 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D +++VWD + +C ++LTGHT SV CL++ + ++ S S D T++VW + G
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 278
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
+ TL H V + S + + S+ D+ + R L + N
Sbjct: 279 LCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERAL----SRYN 334
Query: 362 VV-DFDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDN 417
+V + +VS S D T+ +W+ + + + + GH+ I + + R++ S S D
Sbjct: 335 LVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDK 394
Query: 418 TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
+I+LWD G L L GH V I + D++ +VSG+ D +KVW++ A
Sbjct: 395 SIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 233 (87.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 59/209 (28%), Positives = 105/209 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GH+ +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVL 160
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-------KY 369
+ +S +G + K+ I +WD + ++ R L GH + + ++ +Y
Sbjct: 161 SISWSPDGKKLASGCKNGQILLWDPSTGKQVG--RALAGHSKWITALSWEPLHANPECRY 218
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA 428
+ S+S D +++VW+T++ R L GH + + CL++ D L+ S S D TI++W G
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 278
Query: 429 CLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + + +GA++
Sbjct: 279 LCRTLQGHGHWVNTMALSTDYALRTGAFE 307
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 53/168 (31%), Positives = 83/168 (49%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++L H EAV+ + FS G + + S D ++ WD+ + T GHR V + +
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCQGHRHWVLSISW 164
Query: 366 --DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSS 415
D K + S + I +W+ S+ + V R L GH + I L + R V S S
Sbjct: 165 SPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSK 224
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D ++R+WD G C R+L GH + V C+R+ ++ S + D IKVW
Sbjct: 225 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 272
Score = 182 (69.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ SG D T++ WD + GH VL + + D + + SG + + +WD +TG
Sbjct: 129 LASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTG 188
Query: 305 EMVN-TLIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+ V L H + + LH + + SKD S+ VWD + R+L GH
Sbjct: 189 KQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGR---CERILTGH 245
Query: 357 RAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGS 414
+V + + + + SAS DRTIKVW RTL GH + + D + +G+
Sbjct: 246 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 305
Query: 415 ---SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP 470
++ ++ D+ G+ + E +R +R+VSG+ D + +W+ P
Sbjct: 306 FEPAEASVNAQDLR-GSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKP 364
Query: 471 RAPTT 475
A T
Sbjct: 365 LARMT 369
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG + I LWD G + R L GH + + + ++ + + S + DG ++
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 461 VWNLVAALDPRAPT----TTLCLR 480
VW+ A R T + CLR
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLR 253
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 258 (95.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 70/207 (33%), Positives = 105/207 (50%)
Query: 268 KVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN 324
+V+ GH G V C+ D I+GS+D+T++VWD+ TG++ TL H V + S+
Sbjct: 133 RVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSD 192
Query: 325 G--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIK 380
+ + S+D+++ WD+ N+I R GH + V V I +A D IK
Sbjct: 193 RHPYLFSVSEDKTVKCWDL-EKNQII--RDYYGHLSGVRTVSIHPTLDLIATAGRDSVIK 249
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438
+W+ + V TL GHK I +Q D VVS S+D T+RLWD+ G ++VL H+
Sbjct: 250 LWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKR 309
Query: 439 LVRCIRFDAKRI-VSGAYDGKIKVWNL 464
VR K V+ A I+ W L
Sbjct: 310 SVRATALHPKEFSVASACTDDIRSWGL 336
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/150 (28%), Positives = 74/150 (49%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKV 381
N +T S D ++ VWD+ + L+ L GH V V ++ Y+ S S D+T+K
Sbjct: 152 NEWFITGSNDTTMKVWDLATGK---LKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKC 208
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHE-- 437
W+ + +R GH G+ + L + + D+ I+LWD+ + L GH+
Sbjct: 209 WDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGP 268
Query: 438 -ELVRCIRFDAKRIVSGAYDGKIKVWNLVA 466
V+C D + +VS + D +++W++VA
Sbjct: 269 INQVQCTPVDPQ-VVSSSTDATVRLWDVVA 297
Score = 176 (67.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 60/239 (25%), Positives = 107/239 (44%)
Query: 243 DDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVW 299
D H + S D T+K WD Q I+ GH V + + I + DS +++W
Sbjct: 192 DRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLW 251
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
D+ T V TL+ H + ++ + + +V+ S D ++ +WD+V+ + +VL H+
Sbjct: 252 DMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTM---KVLTHHK 308
Query: 358 AAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQY-RDRLVVSGS 414
+V K + V+++ I+ W + + K GI L +D ++ +G
Sbjct: 309 RSVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQDDVLFAGG 368
Query: 415 SDNTIRLWDIECG------ACLRV---LEGHEELVRCIRFDAK--RIVSGAYDGKIKVW 462
+ + +D + G A + LEG E V C FD R+++G D IK+W
Sbjct: 369 DNGVLSFYDYKSGHKYQSLATREMVGSLEG-ERSVLCSTFDKTGLRLITGEADKSIKIW 426
Score = 171 (65.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 95/409 (23%), Positives = 175/409 (42%)
Query: 45 YDPNRKKEPAPQFASE-KEMCFKYFDK-WSEQDQIDFVENLLSRMCHYQHGH--INTYLK 100
YD RK+ + F+ E K++ ++ +SE Q ++S+ H H +N +
Sbjct: 51 YDTYRKESSS--FSGEGKKVTLQHVPTDFSEASQA-----VISKKDHDTHASAFVNKIFQ 103
Query: 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DR 157
P + + L+ N EK ++S + W+ + + R +NGH + C+ +
Sbjct: 104 PEVAEE---LIVNRYEK-LLSQRPE-----WH-APWKLSRVINGHLGWVRCVAIDPVDNE 153
Query: 158 LVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW 217
++GS+D T++ D +++ T L + + + W
Sbjct: 154 WFITGSNDTTMKVWD----LATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCW 209
Query: 218 RMGKFLLQRINCRSENSKGVYCLQYDD--HKIVSGLRDNTIKVWD-RVSLQCIKVLTGHT 274
+ K Q I + GV + I + RD+ IK+WD R + I L GH
Sbjct: 210 DLEKN--QIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVI-TLVGHK 266
Query: 275 G---SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV----LHLR-FSNGM 326
G V C D +V+ S S+D+TVR+WDV G+ + L HH +V LH + FS +
Sbjct: 267 GPINQVQCTPVDPQVV-SSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFS--V 323
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI------- 379
C+ D I W + + +T +N + ++ ++ A GD +
Sbjct: 324 ASACTDD--IRSWGLAEGSLLT--NFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYK 379
Query: 380 ---KVWNTSSCEFVRTLNGHKRGIACLQYRDRL---VVSGSSDNTIRLW 422
K + ++ E V +L G +R + C + D+ +++G +D +I++W
Sbjct: 380 SGHKYQSLATREMVGSLEG-ERSVLCSTF-DKTGLRLITGEADKSIKIW 426
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 228 (85.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 60/239 (25%), Positives = 121/239 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D+ ++S D+ IK+W+R +LQCI+ +T LC + +R ++ G+ ++++D
Sbjct: 426 DNIAVLSAAADS-IKIWNRSTLQCIRTMTCEYA--LCSFFVPGDRQVVIGTKTGKLQLYD 482
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD--MVSPNEITLRRVLVGH 356
+ +G ++ T+ H A+ + S VT D+S+ WD +V T +R+ V
Sbjct: 483 LASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQ 542
Query: 357 RAAVNV------VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ--YR 406
+ + V + ++K + + D T+K++ + +F +L GHK + C+ +
Sbjct: 543 TRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHD 602
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
L+ +GS+D +++W ++ G C + L H++ V ++F K + D KIK W+
Sbjct: 603 GALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWD 661
Score = 198 (74.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 61/190 (32%), Positives = 97/190 (51%)
Query: 258 VWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+WD + I +L G V CL D + G D ++R++ + +GE T H
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVS 372
A+ L++ G + + SKD I VWD++ NE L R L GH+ A+ F EK ++
Sbjct: 109 AITTLKYDQLGGRLASGSKDTDIIVWDVI--NESGLYR-LKGHKDAITQALFLREKNLLV 165
Query: 373 ASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
SG D +K W+ + +T+ GH+ G+ L RL+ +G+SD+ +R+WDI A
Sbjct: 166 TSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLI-TGASDSELRVWDI---A 221
Query: 429 CLRVLEGHEE 438
L+ +E EE
Sbjct: 222 YLQEIEDPEE 231
Score = 196 (74.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 70/284 (24%), Positives = 132/284 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D ++SA+ D +IK+WN S+ + +RT+ + DR VV G+ ++ D
Sbjct: 426 DNIAVLSAAAD-SIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQLYD-- 482
Query: 175 QIVSSSHDDTILIWD--FLNYSETPIQXXXXXXXXXXXXX------IENNWRMGKFLLQR 226
+ S + +TI D + S +P Q +++ K L +
Sbjct: 483 -LASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVK 541
Query: 227 INCRSENSKGVYCLQYD-DHKIVS-GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--Y 282
+ + V C+ Y + K+++ L D T+K++ +L+ L GH V+C+ +
Sbjct: 542 QTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH 601
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
D +I +GS+D V++W ++ G+ +L H ++V++L+F + + T KD I WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWD 661
Query: 341 MVSPNEITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVW 382
I + L GH + V Y+VS+S D+++++W
Sbjct: 662 ADKFEHI---QTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 180 (68.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 55/240 (22%), Positives = 112/240 (46%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDV 301
D ++V G + ++++D S ++ + H G++ + L D+R ++G +D +V+ WD
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDF 525
Query: 302 NTGEMVNTL-----------IHHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEIT 348
+ N+ + E VL + +S N ++ S D ++ ++ V +
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIF-YVDTLKFF 584
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY- 405
L L GH+ V +D D I + S DR +K+W + ++L H + LQ+
Sbjct: 585 LS--LYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFV 642
Query: 406 -RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
+ L + D+ I+ WD + ++ LEGH + + C+ +VS ++D +++W
Sbjct: 643 PKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 177 (67.4 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 54/191 (28%), Positives = 96/191 (50%)
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVS-PNEITLRRV 352
V +WD+ GE + L + V L S +G+ + +D SI ++ ++S +T
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN-- 104
Query: 353 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR- 408
GH+AA+ + +D+ + S S D I VW+ + + L GHK I L R++
Sbjct: 105 --GHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKN 162
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWNLVA 466
L+V+ D ++ WD++ C + + GH V + + KR+++GA D +++VW+ +A
Sbjct: 163 LLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD-IA 221
Query: 467 AL----DPRAP 473
L DP P
Sbjct: 222 YLQEIEDPEEP 232
Score = 162 (62.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 240 LQYDDHKIVSGLRDNTIKVWD------------RVSLQCIKVLTGHTGSVLCLQY--DER 285
L D V+G D ++K WD R+S++ + L VLC+ Y +++
Sbjct: 504 LSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDE-DVLCVSYSPNQK 562
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVS 343
++ D TV+++ V+T + +L H V+ + S+ ++ T S DR++ +W +
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDF 622
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIA 401
+ + L H +V + F K ++ +G D IK W+ E ++TL GH + I
Sbjct: 623 GD---CHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 402 CLQYRDR--LVVSGSSDNTIRLWD 423
CL VVS S D ++RLW+
Sbjct: 680 CLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/152 (28%), Positives = 77/152 (50%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTV 296
C D + G D +I+++ +S + GH ++ L+YD+ + SGS D+ +
Sbjct: 72 CPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDI 131
Query: 297 RVWDVNTGEMVNTLIHHCEAV---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
VWDV + L H +A+ L LR N ++VT KD + WD+ + + + +
Sbjct: 132 IVWDVINESGLYRLKGHKDAITQALFLREKN-LLVTSGKDTMVKWWDLDTQHCF---KTM 187
Query: 354 VGHRAAV--NVVDFDEKYIVSASGDRTIKVWN 383
VGHR V V+ +EK +++ + D ++VW+
Sbjct: 188 VGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
Score = 155 (59.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 283 DERVIISGS-SDSTVRVWDVNTGEMVNT--LIH--HCEAVLHLRFSNGMMVTCSKDRSIA 337
D V + S D RV ++ T + + LIH H E N ++ S + S+
Sbjct: 340 DPEVNVEMSLQDEIQRVTNIKTSAKIKSFDLIHSPHGELKAVFLLQNNLVELYSLNPSLP 399
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG 395
V + IT+ GHR+ V + F D ++SA+ D +IK+WN S+ + +RT+
Sbjct: 400 TPQPVRTSRITIG----GHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMTC 454
Query: 396 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ DR VV G+ ++L+D+ G L ++ H+ + + D + V+G
Sbjct: 455 EYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTG 514
Query: 454 AYDGKIKVWNLVAALDPRAPTTTLCLR 480
D +K W+ D + L ++
Sbjct: 515 GADKSVKFWDFELVKDENSTQKRLSVK 541
Score = 129 (50.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 50/213 (23%), Positives = 99/213 (46%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH V L + D ++S ++DS +++W+ +T + + T+ CE L F G +
Sbjct: 413 GHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQV 469
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW----- 382
V +K + ++D+ S N + G ++++ D++ V+ D+++K W
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSP-DQRGFVTGGADKSVKFWDFELV 528
Query: 383 ---NTS----SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL 433
N++ S + RTL + + C+ Y +L+ D T++++ ++ L
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDE-DVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 434 EGHEELVRC--IRFDAKRIVSGAYDGKIKVWNL 464
GH+ V C I D I +G+ D +K+W L
Sbjct: 588 YGHKLPVICMDISHDGALIATGSADRNVKIWGL 620
Score = 85 (35.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 42/173 (24%), Positives = 75/173 (43%)
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL---V 159
L+++ L P+ D ++ D +I++++ S E T NGHK I L+Y D+L +
Sbjct: 64 LKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKY-DQLGGRL 122
Query: 160 VSGSSDNTIRYRD---EFQIVS-SSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIEN 215
SGS D I D E + H D I FL + ++
Sbjct: 123 ASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQH 182
Query: 216 NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK 268
++ + R+E G+ L ++ ++++G D+ ++VWD LQ I+
Sbjct: 183 CFKT------MVGHRTE-VWGLVLLS-EEKRLITGASDSELRVWDIAYLQEIE 227
Score = 43 (20.2 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 130 VWNTSSCEFVRTLNGHKRGIACL-QYRDRLVVS-GSSDNTIR 169
+W+ E + L G K+ + CL D L ++ G D +IR
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIR 90
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 239 (89.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 70/240 (29%), Positives = 114/240 (47%)
Query: 247 IVSGLRDNTIKVW------DRVSLQCIKV-LTGHTGSV--LCLQYDERVIISGSSDSTVR 297
IVS RD + VW D + K LTGH+ ++ + + D +SGS D +VR
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+WD++ GE + + I H V + FS N +V+ S+D++I +W+ ++ + T+
Sbjct: 98 LWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQ-- 155
Query: 356 HRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDR 408
H + V F ++ IVS D+ +KVWN +C+ + L GH G+ +
Sbjct: 156 HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHT-GVLNTVTISPDGS 214
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAAL 468
L SG D +LWD++ G L LE + + A D I++WNL + L
Sbjct: 215 LCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRFIRIWNLESKL 274
Score = 222 (83.2 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 62/198 (31%), Positives = 106/198 (53%)
Query: 285 RVIISGSSDSTVRVWDVNT----GEM---VNTLIHHCEAVLHLRFSN-GMM-VTCSKDRS 335
+ I+S S D + VW++NT GE+ +L H +A+ + S+ G+ ++ S D S
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT-SSCEFVRT 392
+ +WD+ S E T+R +GH + V V F D + IVSAS D+TIK+WNT + C++ T
Sbjct: 96 VRLWDL-SLGE-TIRS-FIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTIT 152
Query: 393 LNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--D 446
H I C+++ ++VS D +++W+++ + LEGH ++ + D
Sbjct: 153 DQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPD 212
Query: 447 AKRIVSGAYDGKIKVWNL 464
SG DG K+W++
Sbjct: 213 GSLCASGGKDGVAKLWDV 230
Score = 134 (52.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 63/245 (25%), Positives = 105/245 (42%)
Query: 117 KYIVSASGDRTIKVWNTS----SCEF---VRTLNGHKRGIACLQYR-DRL-VVSGSSDNT 167
K IVSAS D+ + VWN + S E ++L GH + I + D L +SGS D++
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 168 IRYRDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQ 225
+R D + + S T D + S +P + N K+ +
Sbjct: 96 VRLWDLSLGETIRSFIGHTS---DVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTIT 152
Query: 226 RINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLC 279
+++ + C+++ IVS D +KVW+ + K L GHTG + +
Sbjct: 153 D----QQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVT 208
Query: 280 LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK-DRSIAV 338
+ D + SG D ++WDV G+ + +L + L FS C+ DR I +
Sbjct: 209 ISPDGSLCASGGKDGVAKLWDVKEGKHLYSL-ETGSTINSLCFSPCDYWLCAATDRFIRI 267
Query: 339 WDMVS 343
W++ S
Sbjct: 268 WNLES 272
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 54/246 (21%), Positives = 107/246 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
D + +S S D ++++W+ S E +R+ GH + + + +R +VS S D TI+ +
Sbjct: 83 DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWN 142
Query: 173 -----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
++ I H D I + +S +P Q + W + L
Sbjct: 143 TLAQCKYTITDQQHTDWITC---VRFSPSPNQAIIVSCGWDKLVKV---WNLKNCDL--- 193
Query: 228 NCRSENSKGVY---CLQYDDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYD 283
N E GV + D SG +D K+WD + + TG T + LC
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPC 253
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL------HLRFS-NGMMVTC-SKDRS 335
+ + + ++D +R+W++ + +++ + ++ + L +S NG ++ C S D +
Sbjct: 254 DYWLCA-ATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGN 312
Query: 336 IAVWDM 341
I V+++
Sbjct: 313 IYVYEV 318
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 239 (89.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 70/240 (29%), Positives = 114/240 (47%)
Query: 247 IVSGLRDNTIKVW------DRVSLQCIKV-LTGHTGSV--LCLQYDERVIISGSSDSTVR 297
IVS RD + VW D + K LTGH+ ++ + + D +SGS D +VR
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+WD++ GE + + I H V + FS N +V+ S+D++I +W+ ++ + T+
Sbjct: 98 LWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQ-- 155
Query: 356 HRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDR 408
H + V F ++ IVS D+ +KVWN +C+ + L GH G+ +
Sbjct: 156 HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHT-GVLNTVTISPDGS 214
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAAL 468
L SG D +LWD++ G L LE + + A D I++WNL + L
Sbjct: 215 LCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRFIRIWNLESKL 274
Score = 222 (83.2 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 62/198 (31%), Positives = 106/198 (53%)
Query: 285 RVIISGSSDSTVRVWDVNT----GEM---VNTLIHHCEAVLHLRFSN-GMM-VTCSKDRS 335
+ I+S S D + VW++NT GE+ +L H +A+ + S+ G+ ++ S D S
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT-SSCEFVRT 392
+ +WD+ S E T+R +GH + V V F D + IVSAS D+TIK+WNT + C++ T
Sbjct: 96 VRLWDL-SLGE-TIRS-FIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTIT 152
Query: 393 LNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--D 446
H I C+++ ++VS D +++W+++ + LEGH ++ + D
Sbjct: 153 DQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPD 212
Query: 447 AKRIVSGAYDGKIKVWNL 464
SG DG K+W++
Sbjct: 213 GSLCASGGKDGVAKLWDV 230
Score = 134 (52.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 63/245 (25%), Positives = 105/245 (42%)
Query: 117 KYIVSASGDRTIKVWNTS----SCEF---VRTLNGHKRGIACLQYR-DRL-VVSGSSDNT 167
K IVSAS D+ + VWN + S E ++L GH + I + D L +SGS D++
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 168 IRYRDEF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQ 225
+R D + + S T D + S +P + N K+ +
Sbjct: 96 VRLWDLSLGETIRSFIGHTS---DVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTIT 152
Query: 226 RINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLC 279
+++ + C+++ IVS D +KVW+ + K L GHTG + +
Sbjct: 153 D----QQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVT 208
Query: 280 LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK-DRSIAV 338
+ D + SG D ++WDV G+ + +L + L FS C+ DR I +
Sbjct: 209 ISPDGSLCASGGKDGVAKLWDVKEGKHLYSL-ETGSTINSLCFSPCDYWLCAATDRFIRI 267
Query: 339 WDMVS 343
W++ S
Sbjct: 268 WNLES 272
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 54/246 (21%), Positives = 107/246 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
D + +S S D ++++W+ S E +R+ GH + + + +R +VS S D TI+ +
Sbjct: 83 DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWN 142
Query: 173 -----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
++ I H D I + +S +P Q + W + L
Sbjct: 143 TLAQCKYTITDQQHTDWITC---VRFSPSPNQAIIVSCGWDKLVKV---WNLKNCDL--- 193
Query: 228 NCRSENSKGVY---CLQYDDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYD 283
N E GV + D SG +D K+WD + + TG T + LC
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPC 253
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL------HLRFS-NGMMVTC-SKDRS 335
+ + + ++D +R+W++ + +++ + ++ + L +S NG ++ C S D +
Sbjct: 254 DYWLCA-ATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGN 312
Query: 336 IAVWDM 341
I V+++
Sbjct: 313 IYVYEV 318
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 257 (95.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 74/253 (29%), Positives = 122/253 (48%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIK-VLTGHTGSVLCLQYDE--RVIISGSSDSTVRVW 299
D +V+G D IK+WD +S Q ++ V +GH + L + R I+SGS D T R+W
Sbjct: 371 DGKYLVTGTEDRQIKLWD-LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW 429
Query: 300 DVNTGEMVNTL-IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
DV TG+ + L I + + + ++ + S D+ I VW + TL L GH+
Sbjct: 430 DVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSG----TLVERLEGHKE 485
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV------------RTLNGHKRGIACLQ 404
+V + F D ++S S D+TIKVW + V T GH + +
Sbjct: 486 SVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVA 545
Query: 405 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK 460
R +SGS D +++ WD++ G +GH+ V + F D ++ SG+ D + +
Sbjct: 546 VSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRAR 605
Query: 461 VWNLVAALDPRAP 473
+W++ DP +P
Sbjct: 606 IWSI----DPASP 614
Score = 232 (86.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 71/212 (33%), Positives = 112/212 (52%)
Query: 273 HTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV-----LHLR---F 322
H V C+++ + + +G + + V+DV TG+ + TL H E+ L++R F
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAA-NVFDVQTGKKLFTL--HEESPDPSRDLYVRTIAF 368
Query: 323 S-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRT 378
S +G +VT ++DR I +WD+ S ++ R V GH + +DF ++IVS SGDRT
Sbjct: 369 SPDGKYLVTGTEDRQIKLWDL-STQKV--RYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 379 IKVWN--TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
++W+ T C + IA + D+ + GS D IR+W + G + LEGH
Sbjct: 426 ARLWDVETGQCILKLEIENGVTAIA-ISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGH 483
Query: 437 EELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
+E V I F D+ ++SG+ D IKVW L A
Sbjct: 484 KESVYSIAFSPDSSILLSGSLDKTIKVWELQA 515
Score = 188 (71.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 57/184 (30%), Positives = 95/184 (51%)
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLV 354
RV+++N +V+TL H V ++FSN G + +++ V+D+ + ++ TL
Sbjct: 300 RVFNIN---LVHTL-EHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESP 355
Query: 355 --GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDR 408
V + F D KY+V+ + DR IK+W+ S+ + +GH++ I L + R
Sbjct: 356 DPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGR 415
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNLVAA 467
+VSGS D T RLWD+E G C+ LE + I + + I G+ D I+VW++
Sbjct: 416 FIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT 475
Query: 468 LDPR 471
L R
Sbjct: 476 LVER 479
Score = 148 (57.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 63/250 (25%), Positives = 106/250 (42%)
Query: 157 RLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXX 212
+ +V+G+ D I+ D + + V S H+ I DF + +
Sbjct: 373 KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD-- 430
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
+E G+ +L+ EN + +D I G D I+VW VS ++ L G
Sbjct: 431 VET----GQCILK---LEIENGVTAIAISPNDQFIAVGSLDQIIRVWS-VSGTLVERLEG 482
Query: 273 HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN------------TLIHHCEAVL 318
H SV + + D +++SGS D T++VW++ V T H + VL
Sbjct: 483 HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVL 542
Query: 319 HLRFSNGMM--VTCSKDRSIAVWDM-VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA 373
+ S ++ SKDRS+ WD+ + +T + GH+ +V V F D + S
Sbjct: 543 SVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQ----GHKNSVISVCFSPDGRQFASG 598
Query: 374 SGDRTIKVWN 383
SGD ++W+
Sbjct: 599 SGDLRARIWS 608
Score = 46 (21.3 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 35 SPQLPPMTILYDPNRKKEPA 54
+PQLP ++ Y+P+ +PA
Sbjct: 210 NPQLPGVSNYYNPSATSKPA 229
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 266 (98.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 68/240 (28%), Positives = 117/240 (48%)
Query: 241 QYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
Q D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR
Sbjct: 507 QASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVR 566
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+W + T + H V +FS G V+ DR +W + + R+ G
Sbjct: 567 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAG 623
Query: 356 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV 411
H A VN F + Y+ + S DRT+++W+ + VR GHK I L + R +
Sbjct: 624 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 683
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+G++D + LWDI G + L+GH + V +RF D + + SG+ D +++W+ + A +
Sbjct: 684 TGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 743
Score = 223 (83.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 66/248 (26%), Positives = 114/248 (45%)
Query: 243 DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
DD +++G D+T++VW S+ K+ + S L L I S D R+ D
Sbjct: 478 DDSSLIAGGFADSTVRVW---SVTPKKLRSVKQASDLSL------IDKESDDVLERIMDE 528
Query: 302 NTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + L H V FS +++ S+D ++ +W + + T GH
Sbjct: 529 KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHNYP 585
Query: 360 VNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 415
V F Y VS DR ++W T + +R GH + C ++ V +GS+
Sbjct: 586 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA 645
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL---DP 470
D T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++ L +
Sbjct: 646 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 705
Query: 471 RAPTTTLC 478
+ T T+C
Sbjct: 706 KGHTDTVC 713
Score = 181 (68.8 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 55/242 (22%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 510 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 569
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 570 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 621
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C ++ + + + +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 681
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + V LRFS +G ++ + S D ++ +WD +
Sbjct: 682 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA 741
Query: 345 NE 346
E
Sbjct: 742 FE 743
Score = 40 (19.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 46 DPN---RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
DPN + + P P+ + + K + ++ + L +C Y +N Y + +
Sbjct: 416 DPNAPPQNRIPLPEL-KDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTF--LNAY-QGL 471
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
D D I D T++VW+ +
Sbjct: 472 TAVDVTD-----DSSLIAGGFADSTVRVWSVT 498
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 256 (95.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 94/368 (25%), Positives = 167/368 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ S SGD T++ W+ S+ T GH+ + + + + + SG + I D
Sbjct: 78 KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPS 137
Query: 175 ---QI--VSSSHDDTI--LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
Q+ V + H I L W+ L+ + P + W +RI
Sbjct: 138 TGKQVGRVLAGHSKWITGLSWEPLHAN--PECRYMASSSKDGSVRV---WDTTAGRCERI 192
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV----LCLQY 282
+ +++ V CL++ D + S +D TIKVW + L GH V L Y
Sbjct: 193 --LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 250
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD 340
R +++++ D+ G + L +L G +V+ S D ++ +W
Sbjct: 251 ALRTGAFEPAEASINAQDLQ-GSL-QELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWS 308
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ R + GH+A +N V F D + I SAS D++IK+W+ + +++ +L GH
Sbjct: 309 PAEDKKPLAR--MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 366
Query: 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ + + RL+VSGSSD+T+++WD++ L GH + V + + D +R+ SG
Sbjct: 367 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGG 426
Query: 455 YDGKIKVW 462
D +++W
Sbjct: 427 KDKCLRIW 434
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 60/209 (28%), Positives = 106/209 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GH+ +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 52 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVL 111
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-------KY 369
+ +S +G + K+ I +WD + ++ RVL GH + + ++ +Y
Sbjct: 112 SISWSPDGKTLASGCKNGQILLWDPSTGKQVG--RVLAGHSKWITGLSWEPLHANPECRY 169
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA 428
+ S+S D +++VW+T++ R L GH + + CL++ D L+ S S D TI++W G
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 229
Query: 429 CLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + + +GA++
Sbjct: 230 LCRTLQGHGHWVNTMALSTDYALRTGAFE 258
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 66/230 (28%), Positives = 114/230 (49%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D +++VWD + +C ++LTGHT SV CL++ + ++ S S D T++VW + G
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 229
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
+ TL H V + S + + SI D+ + R L +
Sbjct: 230 LCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNL--- 286
Query: 362 VVDFDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDNT 418
V + +VS S D T+ +W+ + + + + GH+ I + + R++ S S D +
Sbjct: 287 VRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKS 346
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
I+LWD G L L GH V I + D++ +VSG+ D +KVW++ A
Sbjct: 347 IKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 396
Score = 190 (71.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 65/245 (26%), Positives = 109/245 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ SG D T++ WD + GH VL + + D + + SG + + +WD +TG
Sbjct: 80 LASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTG 139
Query: 305 EMVN-TLIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+ V L H + + LH M + SKD S+ VWD + R+L GH
Sbjct: 140 KQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGR---CERILTGH 196
Query: 357 RAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGS 414
+V + + + + SAS DRTIKVW RTL GH + + D + +G+
Sbjct: 197 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 256
Query: 415 ---SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP 470
++ +I D++ G+ + + +R +R+VSG+ D + +W+ P
Sbjct: 257 FEPAEASINAQDLQ-GSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKP 315
Query: 471 RAPTT 475
A T
Sbjct: 316 LARMT 320
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++L H EAV+ + FS G + + S D ++ WD+ + T GHR V + +
Sbjct: 59 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCQGHRHWVLSISW 115
Query: 366 --DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSS 415
D K + S + I +W+ S+ + V R L GH + I L + R + S S
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D ++R+WD G C R+L GH + V C+R+ ++ S + D IKVW
Sbjct: 176 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 223
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + +
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG + I LWD G + RVL GH + + + ++ + + S + DG ++
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 461 VWNLVAALDPRAPT----TTLCLR 480
VW+ A R T + CLR
Sbjct: 181 VWDTTAGRCERILTGHTQSVTCLR 204
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 266 (98.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 68/240 (28%), Positives = 117/240 (48%)
Query: 241 QYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
Q D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR
Sbjct: 509 QASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVR 568
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+W + T + H V +FS G V+ DR +W + + R+ G
Sbjct: 569 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAG 625
Query: 356 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV 411
H A VN F + Y+ + S DRT+++W+ + VR GHK I L + R +
Sbjct: 626 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 685
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+G++D + LWDI G + L+GH + V +RF D + + SG+ D +++W+ + A +
Sbjct: 686 TGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 745
Score = 223 (83.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 66/248 (26%), Positives = 114/248 (45%)
Query: 243 DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
DD +++G D+T++VW S+ K+ + S L L I S D R+ D
Sbjct: 480 DDSSLIAGGFADSTVRVW---SVTPKKLRSVKQASDLSL------IDKESDDVLERIMDE 530
Query: 302 NTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + L H V FS +++ S+D ++ +W + + T GH
Sbjct: 531 KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHNYP 587
Query: 360 VNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 415
V F Y VS DR ++W T + +R GH + C ++ V +GS+
Sbjct: 588 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA 647
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL---DP 470
D T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++ L +
Sbjct: 648 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 707
Query: 471 RAPTTTLC 478
+ T T+C
Sbjct: 708 KGHTDTVC 715
Score = 181 (68.8 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 55/242 (22%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 571
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 572 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 623
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C ++ + + + +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + V LRFS +G ++ + S D ++ +WD +
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA 743
Query: 345 NE 346
E
Sbjct: 744 FE 745
Score = 40 (19.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 46 DPN---RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
DPN + + P P+ + + K + ++ + L +C Y +N Y + +
Sbjct: 418 DPNAPPQNRIPLPEL-KDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTF--LNAY-QGL 473
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
D D I D T++VW+ +
Sbjct: 474 TAVDVTD-----DSSLIAGGFADSTVRVWSVT 500
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 263 (97.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/252 (26%), Positives = 127/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 175 (66.7 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 148
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 208
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 209 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 265
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 266 TLNYGMERVWCV 277
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR--Y 170
D+ Y++S + DR +K+W+ + V+TL GH + ++C + L +++GS D T+R +
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 171 RDEFQIVSSSHDDTILIW 188
+++ S+ + +W
Sbjct: 258 SSTYRLESTLNYGMERVW 275
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 263 (97.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/252 (26%), Positives = 127/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 175 (66.7 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 148
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 208
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 209 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 265
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 266 TLNYGMERVWCV 277
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR--Y 170
D+ Y++S + DR +K+W+ + V+TL GH + ++C + L +++GS D T+R +
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 171 RDEFQIVSSSHDDTILIW 188
+++ S+ + +W
Sbjct: 258 SSTYRLESTLNYGMERVW 275
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 263 (97.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/252 (26%), Positives = 127/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 175 (66.7 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 148
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 208
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 209 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 265
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 266 TLNYGMERVWCV 277
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 263 (97.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/252 (26%), Positives = 127/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 175 (66.7 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 148
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 208
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 209 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 265
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 266 TLNYGMERVWCV 277
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 263 (97.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/252 (26%), Positives = 127/252 (50%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ RS+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ LEGH + V C F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 175 (66.7 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 148
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 208
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 209 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 265
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 266 TLNYGMERVWCV 277
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 252 (93.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 67/251 (26%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + +G D ++W L H G + L+++++ I+
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKKGNYIL 296
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +CS D I V + +
Sbjct: 297 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 356
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 357 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKW 413
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD+E G CL L H+E V + F D K + S
Sbjct: 414 SPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLAS 473
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 474 GSFDKCVHIWN 484
Score = 151 (58.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 47/175 (26%), Positives = 82/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 356 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 415
Query: 324 --------NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD+ + L L H+ V V F D KY+
Sbjct: 416 TGPATSNPNSSIMLASASFDSTVRLWDV--ERGVCLH-TLTKHQEPVYSVAFSPDGKYLA 472
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 473 SGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 526
Score = 132 (51.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 41/198 (20%), Positives = 85/198 (42%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ +GS D R+W G + +TL H + L+++ +++ D++ +WD
Sbjct: 250 DGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 308
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
E ++ H A VD+ S S D I V V+T GH
Sbjct: 309 -AHTGEA--KQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 365
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--------- 448
+ +++ L+ S S D T+++W ++ C+ L+ H + + I++
Sbjct: 366 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNS 425
Query: 449 --RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 426 SIMLASASFDSTVRLWDV 443
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 178 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 315 --EAVLHLRF-SNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ T S D +W + L L H+ + + +++K
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIWT----EDGNLASTLGQHKGPIFALKWNKKGN 293
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S S+D I + + C
Sbjct: 294 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCD 353
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 354 RPVKTFQGHTNEVNAIKWD 372
Score = 53 (23.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + + S D ++W T TL HK I L++ + G+
Sbjct: 240 KDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKK----GN- 293
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 294 -----Y-----ILSAGVDKTTIIWD 308
Score = 48 (22.0 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 16/74 (21%), Positives = 32/74 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA---CLQYRDRLVVSGSSDNTIRYRDEFQ 175
+ S SGD T ++WN + NG + C++ V S ++ + +
Sbjct: 198 LASGSGDSTARIWNLNE-----NSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 252
Query: 176 IVSS-SHDDTILIW 188
++++ S+D IW
Sbjct: 253 LLATGSYDGFARIW 266
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 294 YILSAGVDKTTIIWDAHTGE 313
Score = 38 (18.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 179 LRGHESEVFICAWNPVSDLLASGSGDSTAR 208
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 234 (87.4 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 61/238 (25%), Positives = 113/238 (47%)
Query: 237 VYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS 292
V +Q+ H + S RD T+++W HT V + + D + + + S
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLR 350
D +++VW + + +L H V +FS +G ++V+CS+D++I +WD + +
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 351 RVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD- 407
VG N VDF+ I SA D+T+KVW+ + ++ H G+ C+ +
Sbjct: 183 SDSVGF---ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 408 -RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
+++ SSD T+++ D+ G + L+GH V + F + SG D ++ +W
Sbjct: 240 GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 194 (73.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 53/203 (26%), Positives = 98/203 (48%)
Query: 272 GHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MM 327
GH ++ L L + + + + S D+ + +W+ + H + V ++FS +G ++
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+DR++ +W P++ H A V VDF D +++ +AS D++IKVW+
Sbjct: 76 ASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 132
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
F+ +L H + C ++ RL+VS S D TI++WD C+ +
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV 192
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F+ I S D +KVW++
Sbjct: 193 DFNPSGTCIASAGSDQTVKVWDV 215
Score = 190 (71.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 56/204 (27%), Positives = 94/204 (46%)
Query: 272 GHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-M 327
GH V +Q+ ++ S S D TVR+W + + H V + FS +G +
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 117
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
T S+D+SI VW M + L H V F D + IVS S D+TIK+W+T+
Sbjct: 118 ATASEDKSIKVWSMYRQRFLYS---LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 386 SCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+ + V + + + + S SD T+++WD+ L+ + H V CI
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 234
Query: 444 RF--DAKRIVSGAYDGKIKVWNLV 465
F +++ + DG +K+ +L+
Sbjct: 235 SFHPSGNYLITASSDGTLKILDLL 258
Score = 172 (65.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 54/202 (26%), Positives = 98/202 (48%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D +++ +AS D++IKVW+ F+ +L H + C ++ RL+VS S D TI+ D
Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 173 EF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRIN 228
Q V++ D++ +F++++ P + W R+ K LLQ
Sbjct: 173 TTNKQCVNN-FSDSVGFANFVDFN--PSGTCIASAGSDQTVKV---WDVRVNK-LLQHYQ 225
Query: 229 CRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE-- 284
+S GV C+ + + +++ D T+K+ D + + I L GHTG V + + +
Sbjct: 226 V---HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 282
Query: 285 RVIISGSSDSTVRVWDVNTGEM 306
+ SG +D+ V +W N E+
Sbjct: 283 ELFASGGADTQVLLWRTNFDEL 304
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 341 MVSPNEI-TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
M S E L R GH+AA+ +D K + +AS D + +WN GHK
Sbjct: 1 MASATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHK 60
Query: 398 RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ +Q+ L+ S S D T+RLW + + H VR + F D + + +
Sbjct: 61 DVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 454 AYDGKIKVWNL 464
+ D IKVW++
Sbjct: 121 SEDKSIKVWSM 131
Score = 131 (51.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 44/156 (28%), Positives = 68/156 (43%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSS 292
V C ++ D IVS D TIK+WD + QC+ + G + ++ I S S
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 206
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
D TV+VWDV +++ H V + F +G + + S ++ E L
Sbjct: 207 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITAS--SDGTLKILDLLEGRLIY 264
Query: 352 VLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTS 385
L GH V V F + + ASG D + +W T+
Sbjct: 265 TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTN 300
Score = 66 (28.3 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 165
+ L PN K + +AS D + +WN GHK + +Q+ L+ S S D
Sbjct: 24 LDLSPN--GKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRD 81
Query: 166 NTIR 169
T+R
Sbjct: 82 RTVR 85
Score = 49 (22.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDNTIR----YRD 172
+ SAS DRT+++W H + + + D + + + S D +I+ YR
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 134
Query: 173 EF 174
F
Sbjct: 135 RF 136
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 230 (86.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 90/367 (24%), Positives = 157/367 (42%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEFQIV 177
V A +++WN SC V GH + C + ++ S D TIR + ++
Sbjct: 856 VVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWETKKVC 915
Query: 178 SSSHDDTILIWDFLN--YSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSK 235
+S I++ ++ + E + N + G+ I+ +E
Sbjct: 916 KNS---AIVLNKKIDVVFQENEVMVLAVDNIRRLQVI---NGKTGQ-----IDYLTEAQV 964
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD 293
CL + G D I+V + ++ + + T H +V +Q+ D + +IS S D
Sbjct: 965 SCCCLSPHLQYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDD 1024
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
S ++VW+ + E V+ H E V R N +++ S D ++ VW++++ + +
Sbjct: 1025 SAIQVWNWQSEETVSLQAHQ-ETVKDFRLLKNSRLLSWSFDGTVKVWNIITGR---IEKD 1080
Query: 353 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR 408
V H+ V D D S S D+T K+W+ + L GHK + C +
Sbjct: 1081 FVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDST 1140
Query: 409 LVVSGSSDNTIRLWDIECG----ACLRVL-EG----HEELVRCIRF--DAKRIVSGAYDG 457
L+ +G + IR+W++ G +C VL EG H V +RF D K +VS G
Sbjct: 1141 LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAG--G 1198
Query: 458 KIKVWNL 464
+K WN+
Sbjct: 1199 YLKWWNV 1205
Score = 196 (74.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 53/181 (29%), Positives = 90/181 (49%)
Query: 224 LQRINCRSENSKGVY--CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
L R+ R ++ VY C D +I S D T++V+ + + + + H VLC
Sbjct: 606 LSRLVVRP-HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 282 Y--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRS 335
+ D+R I + S D V++W+ TGE+V + H E V F+N ++ T S D
Sbjct: 665 FSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYF 724
Query: 336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL 393
+ +WD+ N+ R + GH +V+ F D+K + S S D T+K+W+ S +++
Sbjct: 725 LKLWDL---NQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSI 781
Query: 394 N 394
N
Sbjct: 782 N 782
Score = 191 (72.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 48/165 (29%), Positives = 85/165 (51%)
Query: 313 HCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK 368
H +AV H FS +G + +C D+++ V+ E L + H V F D++
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFK-AETGEKLLE--IKAHEDEVLCCAFSADDR 670
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRLWDI 424
+I + S D+ +K+WN+ + E V++ + H + C + + L+ +GSSD ++LWD+
Sbjct: 671 FIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDL 730
Query: 425 ECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467
C + GH V RF D K + S + DG +K+W++ +A
Sbjct: 731 NQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSA 775
Score = 187 (70.9 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 60/233 (25%), Positives = 110/233 (47%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER----VIISG 290
V C + DD I + D +K+W+ V+ + ++ H+ V C + ++ +G
Sbjct: 660 VLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATG 719
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNE-- 346
SSD +++WD+N E NT+ H +V H RFS + ++ +CS D ++ +WD+ S NE
Sbjct: 720 SSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERK 779
Query: 347 -ITLRRVLVGHRAAVNVVDFDEKYIV-SASGDRTI-----KV--WNTSSCEFVRTLN-GH 396
I +++ + + ++ K SA G + KV +N + + ++ GH
Sbjct: 780 SINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGH 839
Query: 397 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE--GHEELVRCIRF 445
I + + L V S + LW+++ +CL+V + GH V C F
Sbjct: 840 HSTIQYCDFSPSNHLAVVALSQYCVELWNMD--SCLKVADCRGHLSWVHCAMF 890
Score = 177 (67.4 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 48/167 (28%), Positives = 88/167 (52%)
Query: 269 VLTGHTGSVL--CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--N 324
V+ HT +V C D + I S +D T++V+ TGE + + H + VL FS +
Sbjct: 610 VVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADD 669
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG--DRTIK 380
+ TCS D+ + +W+ V+ E+ + H VN F + +++ A+G D +K
Sbjct: 670 RFIATCSVDKKVKIWNSVT-GELV--QSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLK 726
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425
+W+ + E T+ GH ++ ++ D+L+ S S+D T++LWD++
Sbjct: 727 LWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVK 773
Score = 121 (47.7 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIE 425
+Y+ S D I+V + ++ HK + +Q+ + V+S S D+ I++W+ +
Sbjct: 974 QYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQ 1033
Query: 426 CGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVV 484
+ L+ H+E V+ R R++S ++DG +KVWN++ R +C + V+
Sbjct: 1034 SEETVS-LQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITG---RIEKDFVCHQDTVL 1089
Query: 485 S 485
S
Sbjct: 1090 S 1090
Score = 91 (37.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 17/62 (27%), Positives = 36/62 (58%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRY 170
D+++I + S D+ +K+WN+ + E V++ + H + C + + L+ +GSSD ++
Sbjct: 668 DDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKL 727
Query: 171 RD 172
D
Sbjct: 728 WD 729
Score = 77 (32.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRY 170
N + + + S D +K+W+ + E T+ GH ++ ++ D+L+ S S+D T++
Sbjct: 710 NSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKL 769
Query: 171 RDEFQIVSSSHDDTILIWDF-LNYSET 196
D + S++ +I + F LN E+
Sbjct: 770 WD---VKSANERKSINVKQFFLNSEES 793
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 262 (97.3 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 68/226 (30%), Positives = 112/226 (49%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
+ +++ + L+ SGSSD TIR WD+E + +EG VR
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
Score = 232 (86.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 232 (86.7 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
V + F + SG+ D I+ W+L
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 155 (59.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL 310
+ SGSSD T+R WD+ ++V+ +
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
Score = 38 (18.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 447 AKRIV--SGAYDGKIKVWNLVAALDPRAPTTT 476
AK + S A D + V NL L P A T+T
Sbjct: 470 AKEVAKPSPATDSQFPVPNLEVLLRPPAVTST 501
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 265 (98.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 69/240 (28%), Positives = 117/240 (48%)
Query: 241 QYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
Q D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR
Sbjct: 509 QAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVR 568
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+W + T + H V +FS G V+ DR +W + + R+ G
Sbjct: 569 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAG 625
Query: 356 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV 411
H A VN F + Y+ + S DRT+++W+ + VR GHK I L + R +
Sbjct: 626 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 685
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+G++D + LWDI G + L+GH + V +RF D + + SG+ D +++W+ V A +
Sbjct: 686 TGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 745
Score = 220 (82.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 65/248 (26%), Positives = 114/248 (45%)
Query: 243 DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
DD +++G D+T++VW S+ K+ + + L L I S D R+ D
Sbjct: 480 DDSSLIAGGFADSTVRVW---SVTPKKLRSVKQAADLSL------IDKESDDVLERIMDE 530
Query: 302 NTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + L H V FS +++ S+D ++ +W + + T GH
Sbjct: 531 KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHNYP 587
Query: 360 VNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 415
V F Y VS DR ++W T + +R GH + C ++ V +GS+
Sbjct: 588 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA 647
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL---DP 470
D T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++ L +
Sbjct: 648 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 707
Query: 471 RAPTTTLC 478
+ T T+C
Sbjct: 708 KGHTDTVC 715
Score = 182 (69.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 56/242 (23%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 571
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 572 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 623
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C ++ + + + +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + V LRFS +G ++ + S D ++ +WD V
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 743
Query: 345 NE 346
E
Sbjct: 744 FE 745
Score = 40 (19.1 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 46 DPN---RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
DPN + + P P+ + + K + ++ + L +C Y +N Y + +
Sbjct: 418 DPNAPPQNRIPLPEL-KDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTF--LNAY-QGL 473
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
D D I D T++VW+ +
Sbjct: 474 TAVDVTD-----DSSLIAGGFADSTVRVWSVT 500
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 265 (98.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 69/240 (28%), Positives = 117/240 (48%)
Query: 241 QYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
Q D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR
Sbjct: 510 QAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVR 569
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+W + T + H V +FS G V+ DR +W + + R+ G
Sbjct: 570 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAG 626
Query: 356 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV 411
H A VN F + Y+ + S DRT+++W+ + VR GHK I L + R +
Sbjct: 627 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 686
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+G++D + LWDI G + L+GH + V +RF D + + SG+ D +++W+ V A +
Sbjct: 687 TGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Score = 220 (82.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 65/248 (26%), Positives = 114/248 (45%)
Query: 243 DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
DD +++G D+T++VW S+ K+ + + L L I S D R+ D
Sbjct: 481 DDSSLIAGGFADSTVRVW---SVTPKKLRSVKQAADLSL------IDKESDDVLERIMDE 531
Query: 302 NTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + L H V FS +++ S+D ++ +W + + T GH
Sbjct: 532 KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHNYP 588
Query: 360 VNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 415
V F Y VS DR ++W T + +R GH + C ++ V +GS+
Sbjct: 589 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA 648
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL---DP 470
D T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++ L +
Sbjct: 649 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 708
Query: 471 RAPTTTLC 478
+ T T+C
Sbjct: 709 KGHTDTVC 716
Score = 182 (69.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 56/242 (23%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 513 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 572
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 573 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 624
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C ++ + + + +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + V LRFS +G ++ + S D ++ +WD V
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
Query: 345 NE 346
E
Sbjct: 745 FE 746
Score = 40 (19.1 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 46 DPN---RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
DPN + + P P+ + + K + ++ + L +C Y +N Y + +
Sbjct: 419 DPNAPPQNRIPLPEL-KDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTF--LNAY-QGL 474
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
D D I D T++VW+ +
Sbjct: 475 TAVDVTD-----DSSLIAGGFADSTVRVWSVT 501
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 251 (93.4 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 75/239 (31%), Positives = 113/239 (47%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVW 299
LQ+DD KI+ I ++D + I+ L H G V +Y +++GS+D TVRVW
Sbjct: 412 LQFDDDKIIVSTCSPRINIYDTKTGVLIRSLEEHEGDVWTFEYVGDTLVTGSTDRTVRVW 471
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS-----KDRSIAVWDMVS--PNEITLRRV 352
D+ TGE H + ++ G T K+ A D S P I+ R
Sbjct: 472 DLRTGECKQVFYGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDANSMPPYIISSSRD 531
Query: 353 LVGHRAAVNVVDFDEKYI-VSASGDRTIKVWNTSSCEF-VRTLNGHK---RGIACLQYRD 407
++ +D D ++ V+ + D+ + ++ F +RTL GH R +ACL D
Sbjct: 532 CTIRLWSLPCLD-DPPFVNVNENPDQNNDFTSATTNPFYIRTLRGHTDSVREVACLG--D 588
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
L+VS S D T+R+W G CL VL GH V + + R +S D KI++WNL
Sbjct: 589 -LIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNL 646
Score = 250 (93.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 93/334 (27%), Positives = 153/334 (45%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD-- 172
D+K IVS R I +++T + +R+L H+ + +Y +V+GS+D T+R D
Sbjct: 416 DDKIIVSTCSPR-INIYDTKTGVLIRSLEEHEGDVWTFEYVGDTLVTGSTDRTVRVWDLR 474
Query: 173 --EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
E + V H TI + +++ N+ M +++
Sbjct: 475 TGECKQVFYGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDANS--MPPYIISSSRDC 532
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC----IKVLTGHTGSVLCLQYDERV 286
+ + CL DD V+ + +N + D S I+ L GHT SV + +
Sbjct: 533 TIRLWSLPCL--DDPPFVN-VNENPDQNNDFTSATTNPFYIRTLRGHTDSVREVACLGDL 589
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSP 344
I+S S D T+RVW +TG ++ L H V + S ++ D I +W++ S
Sbjct: 590 IVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESG 649
Query: 345 NEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVW--NTSSC-EFVRTLNGHKRG 399
L + L GH V+ V F++ +VSAS D +++VW NT SC + ++ GH
Sbjct: 650 E---LLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTGSCRDILKCPLGH--- 703
Query: 400 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL 433
Q+ + VVSGS +T++LWDI G +R L
Sbjct: 704 -IFFQHDESKVVSGSH-STLQLWDIRSGKLVRDL 735
Score = 202 (76.2 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 71/264 (26%), Positives = 118/264 (44%)
Query: 227 INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV 286
I E+ V+ +Y +V+G D T++VWD + +C +V GHT ++ C++
Sbjct: 439 IRSLEEHEGDVWTFEYVGDTLVTGSTDRTVRVWDLRTGECKQVFYGHTSTIRCIK----- 493
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM----- 341
I+ G+ +T D + E N A +++ S+D +I +W +
Sbjct: 494 IVQGNQSTT----DTDDVEKENR-----PASNDANSMPPYIISSSRDCTIRLWSLPCLDD 544
Query: 342 ---VSPNE----------ITLR----RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNT 384
V+ NE T R L GH +V V IVSAS D T++VW
Sbjct: 545 PPFVNVNENPDQNNDFTSATTNPFYIRTLRGHTDSVREVACLGDLIVSASYDGTLRVWKA 604
Query: 385 SSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 442
S+ + L GH + + + +S +D IR+W++E G L+ L GH LV
Sbjct: 605 STGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQ 664
Query: 443 IRFDAKRIVSGAY--DGKIKVWNL 464
+ F+ +VS + D ++VW+L
Sbjct: 665 VTFNQNILVSASAPPDTSLRVWDL 688
Score = 183 (69.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 58/226 (25%), Positives = 108/226 (47%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM 306
I+S RD TI++W S+ CL V ++ + D T
Sbjct: 525 IISSSRDCTIRLW----------------SLPCLDDPPFVNVNENPDQNNDFTSATTNPF 568
Query: 307 -VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
+ TL H ++V + ++V+ S D ++ VW + + L VL GH V V
Sbjct: 569 YIRTLRGHTDSVREVACLGDLIVSASYDGTLRVWK--ASTGVCLH-VLRGHVGRVYSVTI 625
Query: 366 D--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS--DNTIRL 421
+ + +SA D I++WN S E ++TL+GH ++ + + ++VS S+ D ++R+
Sbjct: 626 NPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRV 685
Query: 422 WDIECGACLRVLE---GHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
WD+ G+C +L+ GH + D ++VSG++ +++W++
Sbjct: 686 WDLNTGSCRDILKCPLGHI----FFQHDESKVVSGSHS-TLQLWDI 726
Score = 128 (50.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 133 TSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIR-YRDEFQI---VSSSHDDTI 185
T++ ++RTL GH R +ACL D L+VS S D T+R ++ + V H +
Sbjct: 564 TTNPFYIRTLRGHTDSVREVACLG--D-LIVSASYDGTLRVWKASTGVCLHVLRGHVGRV 620
Query: 186 LIWDFLNYSET--PIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYD 243
YS T P + I N G+ LLQ ++ +S V + ++
Sbjct: 621 -------YSVTINPSRQQCISAGTDAKIRIWN-LESGE-LLQTLH---GHSNLVSQVTFN 668
Query: 244 DHKIVSGLR--DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
+ +VS D +++VWD + C +L G + Q+DE ++SGS ST+++WD+
Sbjct: 669 QNILVSASAPPDTSLRVWDLNTGSCRDILKCPLGHIF-FQHDESKVVSGSH-STLQLWDI 726
Query: 302 NTGEMVNTLIHHCEAVLHLRFSNGMMV 328
+G++V L+ + + + ++ + V
Sbjct: 727 RSGKLVRDLLTDLDIIWQVAYNENVCV 753
Score = 55 (24.4 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 32 SSASPQLPPMTILYD---PNRKKEPAPQFASEKEMCFKY------FDKWSEQDQIDFVEN 82
SS+S ++YD N P+ +S+K K F+K E + + +
Sbjct: 216 SSSSHNSLHEPVIYDFSSENPSIHPSNHLSSQKNAVLKLAQLISSFEKLPESVRQYLLFH 275
Query: 83 LLSRMCHYQHGHINTYLKPMLQRDFISLLP 112
LLSR + +I+ L P+ Q++F++ P
Sbjct: 276 LLSRCGKHAVQNIHKILLPIFQKNFLTGFP 305
Score = 43 (20.2 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 59 SEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
S++ M F S+++ ++ ++NLL C H++ L P R+
Sbjct: 76 SQQSMIFTNNRCLSDKENLENLQNLLYLHCDLNRPHLSCEL-PSEHRE 122
Score = 37 (18.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 10 KKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDP 47
+KE P M PY+ S + +L + L DP
Sbjct: 508 EKENRPASNDANSMPPYIISSSRDCTIRLWSLPCLDDP 545
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 256 (95.2 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 95/368 (25%), Positives = 167/368 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ S SGD T++ W+ S+ T GH+ + + + R + SG + I D
Sbjct: 127 KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPS 186
Query: 175 ---QI--VSSSHDDTI--LIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
Q+ + H I L W+ L+ + P I W +RI
Sbjct: 187 TGKQVGRTLAGHSKWITGLSWEPLHAN--PECRYVASSSKDGSVRI---WDTTAGRCERI 241
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV----LCLQY 282
+ +++ V CL++ D + S +D TIKVW + L GH V L Y
Sbjct: 242 --LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 299
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD 340
R ++++V D+ G + L + +L G +V+ S D ++ +W
Sbjct: 300 ALRTGAFEPAEASVNPQDLQ-GSL-QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWS 357
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ R + GH+A +N V F D + + SAS D++IK+W+ + +++ +L GH
Sbjct: 358 PAEDKKPLTR--MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ + + RL+VSGSSD+T+++WD++ L GH + V + + D +R+ SG
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 455 YDGKIKVW 462
D +++W
Sbjct: 476 KDKCLRIW 483
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 66/229 (28%), Positives = 117/229 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D ++++WD + +C ++LTGHT SV CL++ + ++ S S D T++VW + G
Sbjct: 219 VASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 278
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEI--TLRRVLVGHRAAVNVV 363
+ TL H V + S + V+P ++ +L+ + + N+V
Sbjct: 279 LCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA--SVNPQDLQGSLQELKERALSRYNLV 336
Query: 364 DFD-EKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYR--DRLVVSGSSDNTI 419
+ +VS S D T+ +W+ + + T + GH+ I + + R+V S S D +I
Sbjct: 337 RGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSI 396
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
+LWD G L L GH V I + D++ +VSG+ D +KVW++ A
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 229 (85.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GH+ +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVL 160
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-------KY 369
+ +S +G + K+ I +WD + ++ R L GH + + ++ +Y
Sbjct: 161 SISWSPDGRKLASGCKNGQILLWDPSTGKQVG--RTLAGHSKWITGLSWEPLHANPECRY 218
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA 428
+ S+S D ++++W+T++ R L GH + + CL++ D L+ S S D TI++W G
Sbjct: 219 VASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 278
Query: 429 CLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + + +GA++
Sbjct: 279 LCRTLQGHGHWVNTMALSTDYALRTGAFE 307
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 53/168 (31%), Positives = 84/168 (50%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++L H EAV+ + FS G + + S D ++ WD+ + T GHR V + +
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW 164
Query: 366 --DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSS 415
D + + S + I +W+ S+ + V RTL GH + I L + R V S S
Sbjct: 165 SPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D ++R+WD G C R+L GH + V C+R+ ++ S + D IKVW
Sbjct: 225 DGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 272
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + R
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG + I LWD G + R L GH + + + ++ + + S + DG ++
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 461 VWNLVAALDPRAPT----TTLCLR 480
+W+ A R T + CLR
Sbjct: 230 IWDTTAGRCERILTGHTQSVTCLR 253
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 221 (82.9 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 60/214 (28%), Positives = 100/214 (46%)
Query: 241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQYDERVIISGSSDSTVRVW 299
Q D + SG D T+K+WD + C K + + L ++ +ISG + +RVW
Sbjct: 87 QCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVW 146
Query: 300 DVNTGEMVNTLIHHCE-AVLHLRFS-NGMMVTCSKDRSIA-VWDMV----SPNEITLRRV 352
D+ L+ + AV L +G MV + +R VW ++ + E
Sbjct: 147 DLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHK 206
Query: 353 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRD-R 408
L H + ++ KY+ +AS D+T+K+WN + + L GH+R + C+ D
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 442
+V+ SSD T RLW + G ++V +GH + C
Sbjct: 267 FLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 65/306 (21%), Positives = 128/306 (41%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRYRDEFQIV 177
+ +AS D TI+ W + RT+ + L+ D+ ++ + + IR D V
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFD----V 63
Query: 178 SSSHDDTILIWDFL--NYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSK 235
+S+ ++ +D N Q W + Q+ S +
Sbjct: 64 NSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQK-EYESVAAV 122
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV---LCLQYDERVIISGSS 292
L + +++SG ++ I+VWD + C L + L + +D ++++ ++
Sbjct: 123 NTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANN 182
Query: 293 DSTVRVWDVNTGEMVNTL---IHHCEA----VLHLRFS--NGMMVTCSKDRSIAVWDMVS 343
T VW + G+ T +H +A +L S N + T S D+++ +W++
Sbjct: 183 RGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV-- 240
Query: 344 PNEITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 401
+ L +VL GH+ V V D +++V+AS D T ++W+ + + V+ GH +
Sbjct: 241 -DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATV 299
Query: 402 CLQYRD 407
C D
Sbjct: 300 CCALHD 305
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/233 (23%), Positives = 109/233 (46%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTG--EMVNT 309
D+TI+ W+ + +C + + V L+ ++ ++ + + +R++DVN+ + V T
Sbjct: 14 DHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVNSNSPQPVMT 73
Query: 310 LIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDMVSPN-EITLRRVLVGHRAAVNVVDFD 366
H V+ + F M + S+D ++ +WD+ +P + V AAVN V
Sbjct: 74 YDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESV-----AAVNTVVLH 128
Query: 367 EKYIVSASGDRT--IKVW----NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 420
SGD+ I+VW N+ SCE V ++ R + + + +VV+ ++ T
Sbjct: 129 PNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVM-WDGTMVVAANNRGTCY 187
Query: 421 LWDIECGAC-------LRVLEGHE-ELVRCIRFDA-KRIVSGAYDGKIKVWNL 464
+W + G L L+ H +++C+ A K + + + D +K+WN+
Sbjct: 188 VWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV 240
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 46/192 (23%), Positives = 82/192 (42%)
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSP 344
++ + S D T+R W+ TG T+ + V L + + + + + I ++D V+
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFD-VNS 65
Query: 345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS--C----EFVRTLNGH 396
N H V V F D K++ S S D T+K+W+ + C E V +N
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVN-- 123
Query: 397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRC--IRFDAKRIVSG 453
L ++SG + IR+WD+ +C ++ + VR + +D +V+
Sbjct: 124 ---TVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAA 180
Query: 454 AYDGKIKVWNLV 465
G VW L+
Sbjct: 181 NNRGTCYVWRLL 192
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 34/147 (23%), Positives = 75/147 (51%)
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRTIKVW-- 382
++ T S D +I W+ + R + + VN ++ +K+ ++A+ + I+++
Sbjct: 7 ILATASYDHTIRFWEAETGR---CYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDV 63
Query: 383 NTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
N++S + V T + H + + ++ D + + SGS D T+++WD+ C + E +
Sbjct: 64 NSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVN 123
Query: 441 RCIRF-DAKRIVSGAYDGKIKVWNLVA 466
+ + ++SG +G I+VW+L A
Sbjct: 124 TVVLHPNQTELISGDQNGNIRVWDLRA 150
Score = 50 (22.7 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 115 DEKYIVSASGDRTIKVWN 132
D K++ S S D T+K+W+
Sbjct: 89 DAKWMYSGSEDGTVKIWD 106
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 259 (96.2 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 71/249 (28%), Positives = 118/249 (47%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
LQ I S N + + + +G D + VW C+ LTGHT + LQ
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 284 --ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S D I +W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ I + H AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DVRRKGCIFKYK---SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
Query: 398 RGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSG 453
+ +++ + L+ SGSS TIR WD+E + +E VRCI F+ + G
Sbjct: 190 GPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYG 249
Query: 454 AYDGKIKVW 462
+ ++V+
Sbjct: 250 GFQDSLRVY 258
Score = 219 (82.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 56/173 (32%), Positives = 85/173 (49%)
Query: 303 TGEMVNTLIHHCEAV--LHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L L S G ++ T D + VW + PN + L GH
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS---LTGHTTP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
+ + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWD+ C+ + H + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 147 (56.8 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 53/221 (23%), Positives = 99/221 (44%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD-- 172
+ + + D + VW+ + V +L GH I LQ ++ L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINC- 229
+I+ + H I DF Y ++ + ++ ++R C
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGS-----------FVASGSLDTDIKLWD--VRRKGCI 140
Query: 230 --RSENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-- 283
+++ V CL++ D K + S D+T+K+WD + + + TGH G V +++
Sbjct: 141 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPS 200
Query: 284 -ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
E ++ SGSS T+R WD+ +V+ + V + F+
Sbjct: 201 IEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFN 241
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 260 (96.6 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 66/237 (27%), Positives = 116/237 (48%)
Query: 244 DHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D ++ D+ + ++ D + K+L GH+G V + + D ++S S D T+R+W
Sbjct: 468 DLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWS 527
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+ T + H V +FS G V+ DR +W + + R+ GH A
Sbjct: 528 LQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLA 584
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGS 414
V F + Y+ + S DRT+++W+ + VR GHK I L + + + SGS
Sbjct: 585 DVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGS 644
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+D + LWDI G + L+GH + ++F D + I SG+ D +++W+++ A+D
Sbjct: 645 TDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAID 701
Score = 228 (85.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 64/240 (26%), Positives = 110/240 (45%)
Query: 235 KGVYCLQY-DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS 292
+G+ + + DD +++G D+T++VW + KV + D +I S
Sbjct: 427 QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAA---------DLNLIDKESD 477
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLR 350
D R+ D T L H V + FS +++ S+D +I +W + + T
Sbjct: 478 DVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQT---FTCL 534
Query: 351 RVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-- 406
GH V F Y VS DR ++W T + +R GH + C ++
Sbjct: 535 VGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN 594
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
V +GSSD T+RLWD+ G C+R+ GH+ + + F + K + SG+ DG++ +W++
Sbjct: 595 SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 251 (93.4 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + G D ++W L H G + L+++++ ++
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKKGNYVL 292
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N M +CS D I V + + +
Sbjct: 293 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPV 352
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 353 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 409
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD+E G C L H+E V + F D K + S
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLAS 469
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 470 GSFDKYVHIWN 480
Score = 152 (58.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 411
Query: 324 --------NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD V T L+ H+ V V F D KY+
Sbjct: 412 TGPATSNPNSSIMLASASFDSTVRLWD-VEQGVCT--HTLMKHQEPVYSVAFSPDGKYLA 468
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 469 SGSFDKYVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 139 (54.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/198 (21%), Positives = 86/198 (43%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ GS D R+W N G + +TL H + L+++ +++ D++ +WD
Sbjct: 246 DGTLLAMGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWD 304
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
E ++ H A VD+ S S D I V V+T GH
Sbjct: 305 -AHTGEA--KQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNE 361
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--------- 448
+ +++ L+ S S D T+++W ++ AC+ L+ H + + I++
Sbjct: 362 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 421
Query: 449 --RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 422 SIMLASASFDSTVRLWDV 439
Score = 128 (50.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 47/199 (23%), Positives = 89/199 (44%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 174 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 233
Query: 315 --EAVLHLRF-SNGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ S D +W + N L L H+ + + +++K
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIW---TENG-NLASTLGQHKGPIFALKWNKKGN 289
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
Y++SA D+T +W+ + E + H + +++ + S S+D I + + C
Sbjct: 290 YVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCD 349
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 350 HPVKTFQGHTNEVNAIKWD 368
Score = 51 (23.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + S D ++W T + TL HK I L++ + G+
Sbjct: 236 KDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKK----GN- 289
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y ++S+ D T +IWD
Sbjct: 290 -----Y-----VLSAGVDKTTIIWD 304
Score = 47 (21.6 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 119 IVSASGDRTIKVWN 132
+ S SGD T ++WN
Sbjct: 194 LASGSGDSTARIWN 207
Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTI 168
Y++SA D+T +W+ + E + H + +++ + S S+D I
Sbjct: 290 YVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCI 341
Score = 38 (18.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 175 LRGHESEVFICAWNPVSDLLASGSGDSTAR 204
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 264 (98.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 68/240 (28%), Positives = 117/240 (48%)
Query: 241 QYDDHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
Q D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR
Sbjct: 510 QASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVR 569
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+W + T + H V +FS G V+ DR +W + + R+ G
Sbjct: 570 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAG 626
Query: 356 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV 411
H A VN + + Y+ + S DRT+++W+ + VR GHK I L + R +
Sbjct: 627 HLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 686
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+G++D + LWDI G + L+GH + V +RF D + + SG+ D +++W+ V A +
Sbjct: 687 TGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Score = 227 (85.0 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 67/248 (27%), Positives = 114/248 (45%)
Query: 243 DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
DD +++G D+T++VW S+ K+ + S L L I S D R+ D
Sbjct: 481 DDSSLIAGGFADSTVRVW---SVTPKKLRSVKQASDLSL------IDKESDDVLERIMDE 531
Query: 302 NTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + L H V FS +++ S+D ++ +W + + T GH
Sbjct: 532 KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHNYP 588
Query: 360 VNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 415
V F Y VS DR ++W T + +R GH + C +Y V +GS+
Sbjct: 589 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSA 648
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL---DP 470
D T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++ L +
Sbjct: 649 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 708
Query: 471 RAPTTTLC 478
+ T T+C
Sbjct: 709 KGHTDTVC 716
Score = 186 (70.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 57/242 (23%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 513 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 572
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 573 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 624
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C +Y + + + +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + V LRFS +G ++ + S D ++ +WD V
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
Query: 345 NE 346
E
Sbjct: 745 FE 746
Score = 40 (19.1 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 46 DPN---RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
DPN + + P P+ + + K + ++ + L +C Y +N Y + +
Sbjct: 419 DPNAPPQNRIPLPEL-KDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTF--LNAY-QGL 474
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
D D I D T++VW+ +
Sbjct: 475 TAVDVTD-----DSSLIAGGFADSTVRVWSVT 501
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 194 (73.4 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 58/197 (29%), Positives = 93/197 (47%)
Query: 270 LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNGMMV 328
L+ H V L + ++SGSSD T+R WD+ G V TL + A + G
Sbjct: 435 LSSHMDEVTALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTLDVMWAAAQASVSLGTG--- 491
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE 388
D W + ++ VG AV V FD + + D +++W+ S +
Sbjct: 492 ----D---GAWRQTARSQAE-DADFVG---AVQV--FDAA-LACGTADGMVRLWDLRSGQ 537
Query: 389 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK 448
R L GH + LQ+ + +V+GS D +IR+WD+ G+ ++ V + FDA+
Sbjct: 538 VHRNLVGHTGPVTALQFDNMHLVTGSHDRSIRIWDLRTGSIFDAF-AYDHPVTSMMFDAR 596
Query: 449 RIVSGAYDGKIKVWNLV 465
RIVS A + +KV++ V
Sbjct: 597 RIVSAAGEDVVKVYDKV 613
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 45/173 (26%), Positives = 85/173 (49%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN 324
I+ L H + + +D ++S + D +V+VWD+N G + +L H +V L+ +
Sbjct: 312 IRELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQVED 371
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSAS-GDRTIK--V 381
++ T S+D ++ +WD+ + H + N D D+ + + D+ +
Sbjct: 372 NILATGSRDATVRLWDLSKAHYDP-------HGSHYNGGDDDDDAMAFENPDDQPVDPPA 424
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
+ + C TL+ H + L ++ +VSGSSD TIR WD+ G C++ L+
Sbjct: 425 GSMADCPLF-TLSSHMDEVTALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTLD 476
Score = 180 (68.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 176 IVSSSHDDTILIWDFLNYS--ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSEN 233
+VS S D TI WD + +T + WR Q ++E+
Sbjct: 452 LVSGSSDKTIRQWDLVKGRCVQTLDVMWAAAQASVSLGTGDGAWR------QTARSQAED 505
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V +Q D + G D +++WD S Q + L GHTG V LQ+D +++GS D
Sbjct: 506 ADFVGAVQVFDAALACGTADGMVRLWDLRSGQVHRNLVGHTGPVTALQFDNMHLVTGSHD 565
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE------I 347
++R+WD+ TG + + + V + F +V+ + + + V+D V + I
Sbjct: 566 RSIRIWDLRTGSIFDAFAYD-HPVTSMMFDARRIVSAAGEDVVKVYDKVESRQWDCGAGI 624
Query: 348 TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
+ A V V + Y+V D + +W
Sbjct: 625 KAAEEMKNPPAIVERVRIRDGYMVEGRRDGIVGIW 659
Score = 146 (56.5 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVN----TLIHHCEAVLHLRFSNGMMVTCSKDRSIAV 338
D+ + D V D G M + TL H + V L F +V+ S D++I
Sbjct: 407 DDAMAFENPDDQPV---DPPAGSMADCPLFTLSSHMDEVTALHFKGDTLVSGSSDKTIRQ 463
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
WD+V + V+ AA V +GD W ++ R+
Sbjct: 464 WDLVKGRCVQTLDVMWA--AAQASVSL-------GTGDGA---WRQTA----RSQAEDAD 507
Query: 399 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGK 458
+ +Q D + G++D +RLWD+ G R L GH V ++FD +V+G++D
Sbjct: 508 FVGAVQVFDAALACGTADGMVRLWDLRSGQVHRNLVGHTGPVTALQFDNMHLVTGSHDRS 567
Query: 459 IKVWNL 464
I++W+L
Sbjct: 568 IRIWDL 573
Score = 143 (55.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 60/244 (24%), Positives = 102/244 (41%)
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
S + V L + +VSG D TI+ WD V +C++ L V+ V + G
Sbjct: 436 SSHMDEVTALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTL-----DVMWAAAQASVSL-G 489
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ D R + + + V ++ + + + D + +WD+ S +
Sbjct: 490 TGDGAWR-------QTARSQAEDADFVGAVQVFDAALACGTADGMVRLWDLRSGQ---VH 539
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQYRDR 408
R LVGH V + FD ++V+ S DR+I++W+ T S F H R R
Sbjct: 540 RNLVGHTGPVTALQFDNMHLVTGSHDRSIRIWDLRTGSI-FDAFAYDHPVTSMMFDAR-R 597
Query: 409 LVVSGSSD-----NTI--RLWDIECGACLRVLEGHEE---LVRCIRFDAKRIVSGAYDGK 458
+V + D + + R WD CGA ++ E + +V +R +V G DG
Sbjct: 598 IVSAAGEDVVKVYDKVESRQWD--CGAGIKAAEEMKNPPAIVERVRIRDGYMVEGRRDGI 655
Query: 459 IKVW 462
+ +W
Sbjct: 656 VGIW 659
Score = 142 (55.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN 302
+VS D+++KVWD + +CI L GHT SV LQ ++ ++ +GS D+TVR+WD++
Sbjct: 334 LVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQVEDNILATGSRDATVRLWDLS 389
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 390 VRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA 447
+R L H+ I + + +VS + D+++++WD+ G C+ LEGH VR ++ +
Sbjct: 312 IRELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQVED 371
Query: 448 KRIVSGAYDGKIKVWNLVAA-LDP 470
+ +G+ D +++W+L A DP
Sbjct: 372 NILATGSRDATVRLWDLSKAHYDP 395
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/168 (25%), Positives = 72/168 (42%)
Query: 304 GEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
G + L H + + + F G +V+ + D S+ VWD+ + I L GH A+V
Sbjct: 309 GTSIRELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGS---LEGHTASVR 365
Query: 362 VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 421
+ ++ + + S D T+++W+ S + H G D + D +
Sbjct: 366 ALQVEDNILATGSRDATVRLWDLSKAHY-DPHGSHYNGGD--DDDDAMAFENPDDQPV-- 420
Query: 422 WDIECGA---C-LRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLV 465
D G+ C L L H + V + F +VSG+ D I+ W+LV
Sbjct: 421 -DPPAGSMADCPLFTLSSHMDEVTALHFKGDTLVSGSSDKTIRQWDLV 467
Score = 114 (45.2 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 90 YQHGHINTYLKPM-LQRDFISLLPNFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHK 146
++H T ++ + +D I+ + +FD + +VSA+ D ++KVW+ ++ + +L GH
Sbjct: 303 HEHFEPGTSIRELRAHQDCITAM-DFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHT 361
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD 183
+ LQ D ++ +GS D T+R D +S +H D
Sbjct: 362 ASVRALQVEDNILATGSRDATVRLWD----LSKAHYD 394
Score = 66 (28.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 141 TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
TL+ H + L ++ +VSGSSD TIR D
Sbjct: 434 TLSSHMDEVTALHFKGDTLVSGSSDKTIRQWD 465
Score = 37 (18.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 163 SSDNTIRYRDEFQIVSSSHDDTILIWD 189
+S ++ D + + S D T+ +WD
Sbjct: 362 ASVRALQVEDNI-LATGSRDATVRLWD 387
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 250 (93.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + +G D ++W L H G + L+++++ I+
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKKGNYIL 295
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +CS D I V + +
Sbjct: 296 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 356 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 412
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD+E G C+ L H+E V + F D K + S
Sbjct: 413 SPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLAS 472
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 473 GSFDKCVHIWN 483
Score = 152 (58.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/175 (26%), Positives = 82/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 324 ----------NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD+ + + L H+ V V F D KY+
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDV--ERGVCIH-TLTKHQEPVYSVAFSPDGKYLA 471
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 472 SGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 136 (52.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 42/198 (21%), Positives = 86/198 (43%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ +GS D R+W G + +TL H + L+++ +++ D++ +WD
Sbjct: 249 DGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 307
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
E ++ H A VD+ S S D I V V+T GH
Sbjct: 308 -AHTGEA--KQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 364
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--------- 448
+ +++ L+ S S D T+++W ++ AC+ L+ H + + I++
Sbjct: 365 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 424
Query: 449 --RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 425 NIMLASASFDSTVRLWDV 442
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 177 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 315 --EAVLHLRF-SNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ T S D +W + L L H+ + + +++K
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWT----EDGNLASTLGQHKGPIFALKWNKKGN 292
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S S+D I + + C
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCD 352
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 353 RPVKTFQGHTNEVNAIKWD 371
Score = 53 (23.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + + S D ++W T TL HK I L++ + G+
Sbjct: 239 KDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKK----GN- 292
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 293 -----Y-----ILSAGVDKTTIIWD 307
Score = 48 (22.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 16/74 (21%), Positives = 32/74 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA---CLQYRDRLVVSGSSDNTIRYRDEFQ 175
+ S SGD T ++WN + NG + C++ V S ++ + +
Sbjct: 197 LASGSGDSTARIWNLNE-----NSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 251
Query: 176 IVSS-SHDDTILIW 188
++++ S+D IW
Sbjct: 252 LLATGSYDGFARIW 265
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 293 YILSAGVDKTTIIWDAHTGE 312
Score = 38 (18.4 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTAR 207
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 250 (93.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + +G D ++W L H G + L+++++ I+
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKKGNYIL 295
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +CS D I V + +
Sbjct: 296 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 356 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 412
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD+E G C+ L H+E V + F D K + S
Sbjct: 413 SPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLAS 472
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 473 GSFDKCVHIWN 483
Score = 152 (58.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/175 (26%), Positives = 82/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 324 ----------NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD+ + + L H+ V V F D KY+
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDV--ERGVCIH-TLTKHQEPVYSVAFSPDGKYLA 471
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 472 SGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 136 (52.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 42/198 (21%), Positives = 86/198 (43%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ +GS D R+W G + +TL H + L+++ +++ D++ +WD
Sbjct: 249 DGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 307
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
E ++ H A VD+ S S D I V V+T GH
Sbjct: 308 -AHTGEA--KQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 364
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--------- 448
+ +++ L+ S S D T+++W ++ AC+ L+ H + + I++
Sbjct: 365 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 424
Query: 449 --RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 425 NIMLASASFDSTVRLWDV 442
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 177 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 315 --EAVLHLRF-SNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ T S D +W + L L H+ + + +++K
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWT----EDGNLASTLGQHKGPIFALKWNKKGN 292
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S S+D I + + C
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCD 352
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 353 RPVKTFQGHTNEVNAIKWD 371
Score = 53 (23.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + + S D ++W T TL HK I L++ + G+
Sbjct: 239 KDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKK----GN- 292
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 293 -----Y-----ILSAGVDKTTIIWD 307
Score = 48 (22.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 16/74 (21%), Positives = 32/74 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA---CLQYRDRLVVSGSSDNTIRYRDEFQ 175
+ S SGD T ++WN + NG + C++ V S ++ + +
Sbjct: 197 LASGSGDSTARIWNLNE-----NSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 251
Query: 176 IVSS-SHDDTILIW 188
++++ S+D IW
Sbjct: 252 LLATGSYDGFARIW 265
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 293 YILSAGVDKTTIIWDAHTGE 312
Score = 38 (18.4 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTAR 207
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 241 (89.9 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 63/238 (26%), Positives = 107/238 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTG 304
+ +G D ++W + L H G + L+++++ I+S D T +WD +TG
Sbjct: 240 LATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG 298
Query: 305 EMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
E H L + + SN +CS D I V + I + GH VN +
Sbjct: 299 EAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI---KTFQGHTNEVNAI 355
Query: 364 DFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD----------RLVV 411
+D + S S D T+K+W+ V L H + I +++ L++
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 412 ----SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
S S D+T+RLWD++ G C+ L H+E V + F D + + SG++D + +WN
Sbjct: 416 ASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 473
Score = 129 (50.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 49/235 (20%), Positives = 98/235 (41%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISGSSDSTVRVWDVNTGE 305
I+S D T +WD + + + H+ L + + S S+D + V +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR 340
Query: 306 MVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVW---------DMVSPN-EI-TLRRV 352
+ T H V +++ + ++ +CS D ++ +W D+ + N EI T++
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWS 400
Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLV 410
G + + SAS D T+++W+ + TL H+ + + + R +
Sbjct: 401 PTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 460
Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNL 464
SGS D + +W+ + GA + G + C ++ + A DG + V +L
Sbjct: 461 ASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 515
Score = 56 (24.8 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRYRDEFQI 176
+ S SGD T ++WN S + +G + + C++ + V S ++ + E +
Sbjct: 184 LASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTL 239
Query: 177 VSS-SHDDTILIW 188
+++ S+D IW
Sbjct: 240 LATGSYDGFARIW 252
Score = 48 (22.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKK----GN- 279
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
F I+S+ D T +IWD
Sbjct: 280 ---------F-ILSAGVDKTTIIWD 294
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
+I+SA D+T +W+ + E
Sbjct: 280 FILSAGVDKTTIIWDAHTGE 299
Score = 38 (18.4 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTAR 194
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 249 (92.7 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + +G D ++W L H G + L+++++ I+
Sbjct: 230 SNKDVTSLDWNSDGTLLATGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKKGNYIL 288
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +CS D I V + +
Sbjct: 289 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 348
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H++ I +++
Sbjct: 349 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKW 405
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD+E G C L H+E V + F D K + S
Sbjct: 406 SPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLAS 465
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 466 GSFDKCVHIWN 476
Score = 147 (56.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 348 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSP 407
Query: 324 --------NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WDM + L H+ V V F D KY+
Sbjct: 408 TGPTTSNPNSSIMLASASFDSTVRLWDM---EQGVCTHTLRKHQEPVYSVAFSPDGKYLA 464
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C + V + +SD ++ + D+
Sbjct: 465 SGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNAQGDKVGASASDGSVCVLDL 518
Score = 141 (54.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 43/198 (21%), Positives = 87/198 (43%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ +GS D R+W N G + +TL H + L+++ +++ D++ +WD
Sbjct: 242 DGTLLATGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 300
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
E ++ H A VD+ S S D I V V+T GH
Sbjct: 301 -AHTGEA--KQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 357
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--------- 448
+ +++ L+ S S D T+++W ++ AC+ L+ H + + I++
Sbjct: 358 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNS 417
Query: 449 --RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 418 SIMLASASFDSTVRLWDM 435
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN-TGEMVNT--LIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G +T ++ HC
Sbjct: 170 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVP 229
Query: 315 --EAVLHLRF-SNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ T S D +W + N L L H+ + + +++K
Sbjct: 230 SNKDVTSLDWNSDGTLLATGSYDGFARIW---TENG-NLASTLGQHKGPIFALKWNKKGN 285
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S S+D I + + C
Sbjct: 286 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCD 345
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 346 RPVKTFQGHTNEVNAIKWD 364
Score = 54 (24.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + + S D ++W T + TL HK I L++ + G+
Sbjct: 232 KDVTSLDWNSDGTLLATGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKK----GN- 285
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 286 -----Y-----ILSAGVDKTTIIWD 300
Score = 47 (21.6 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 119 IVSASGDRTIKVWN 132
+ S SGD T ++WN
Sbjct: 190 LASGSGDSTARIWN 203
Score = 43 (20.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 286 YILSAGVDKTTIIWDAHTGE 305
Score = 38 (18.4 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 171 LRGHESEVFICAWNPVSDLLASGSGDSTAR 200
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 234 (87.4 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 58/169 (34%), Positives = 85/169 (50%)
Query: 307 VNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
V ++ H V L + S ++ T D + +W + PN I L GH + V V
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSPVESV 73
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 419
+ E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS D I
Sbjct: 74 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 133
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 134 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 182
Score = 210 (79.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/192 (25%), Positives = 93/192 (48%)
Query: 263 SLQCIKVLTGHTGSVLCLQYDE---RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
++ ++ + H +V L + R++ +G D V +W +N + +L H V
Sbjct: 13 AVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 72
Query: 320 LRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASG 375
+R + ++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S
Sbjct: 73 VRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQ 129
Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVL 433
D IK+W+ V GH + + CL++ + + S + D+T++LWD+ G +
Sbjct: 130 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 189
Query: 434 EGHEELVRCIRF 445
GH V + F
Sbjct: 190 PGHTGPVNVVEF 201
Score = 193 (73.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 48/165 (29%), Positives = 84/165 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTG 304
+ +G D + +W CI LTGHT V + L E +I++GS ++RVWD+
Sbjct: 40 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 99
Query: 305 EMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+++ TL+ H + L F G V S+D +I +WD+ + R GH AV
Sbjct: 100 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR---GHSQAVRC 156
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ F D K++ SA+ D T+K+W+ ++ + + GH + +++
Sbjct: 157 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
Score = 163 (62.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 38/137 (27%), Positives = 72/137 (52%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVR 297
L + IV+G + +I+VWD + + ++ L GH ++ L + + SGS D+ ++
Sbjct: 75 LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 134
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+WD+ V H +AV LRFS +G + + + D ++ +WD+ + ++ G
Sbjct: 135 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS---EFPG 191
Query: 356 HRAAVNVVDFD-EKYIV 371
H VNVV+F +Y++
Sbjct: 192 HTGPVNVVEFHPNEYLL 208
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 253 (94.1 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 98/369 (26%), Positives = 176/369 (47%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ S SGD T++ W+ S+ T GH+ + + + + + SG ++ I D
Sbjct: 140 KYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPA 199
Query: 175 ---QI--VSSSHDD--TILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
QI V + H T L W+ L+ + P I + MG+ +I
Sbjct: 200 TGNQIGRVLTGHSKWITCLCWEPLHIN--PECRYLASASKDGSIRIWDTL-MGR--CDKI 254
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVW-DRVSLQCIKVLTGHTGSV--LCLQYD 283
+ +++ V C+++ D + S +D TIKVW + + C + L GH V + L D
Sbjct: 255 --LTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILC-RTLQGHAHWVNTMALSTD 311
Query: 284 ERVIISGS---SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTCSKDRSIAVW 339
V+ +G+ +++T+ D++ G + + +R +V+ S D ++ +W
Sbjct: 312 Y-VLRTGAFEPAEATINPQDMS-GSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLW 369
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ L R + GH+A +N V F D + I SAS D++IK+W + +++ +L GH
Sbjct: 370 RPAEDKK-PLER-MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHV 427
Query: 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ + + RL+VSGSSD+T+++WD E L GH + V + D +R+ SG
Sbjct: 428 SAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASG 487
Query: 454 AYDGKIKVW 462
D +++W
Sbjct: 488 GKDKCLRIW 496
Score = 242 (90.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/209 (29%), Positives = 107/209 (51%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GHT +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 114 RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVL 173
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-------KY 369
+ +S +G + K+ I +WD + N+I RVL GH + + ++ +Y
Sbjct: 174 SIAWSPDGKKLASGCKNSQIFLWDPATGNQIG--RVLTGHSKWITCLCWEPLHINPECRY 231
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA 428
+ SAS D +I++W+T + L GH + + C+++ D L+ S S D TI++W + G
Sbjct: 232 LASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGI 291
Query: 429 CLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + ++ +GA++
Sbjct: 292 LCRTLQGHAHWVNTMALSTDYVLRTGAFE 320
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 63/227 (27%), Positives = 116/227 (51%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D +I++WD + +C K+LTGHT SV C+++ + ++ S S D T++VW G
Sbjct: 232 LASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGI 291
Query: 306 MVNTLIHHCEAVLHLRFSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--- 361
+ TL H V + S ++ T + + + A ++P +++ + +A
Sbjct: 292 LCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEAT---INPQDMSGSLAELKDKAQQRYDK 348
Query: 362 VVDFDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYRD--RLVVSGSSDNT 418
V + +VS S D T+ +W + + + + GH+ I + + R++ S S D +
Sbjct: 349 VRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKS 408
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
I+LW+ G L L GH V I + D++ +VSG+ D +KVW+
Sbjct: 409 IKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWD 455
Score = 175 (66.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 50/169 (29%), Positives = 85/169 (50%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPN-EITLRRVLVGHRAAVNVVD 364
++L H EAV+ + FS G + + S D ++ WD+ + + T + GHR V +
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAK----GHRHWVLSIA 176
Query: 365 F--DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQYRD-------RLVVSGS 414
+ D K + S + I +W+ ++ + R L GH + I CL + R + S S
Sbjct: 177 WSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASAS 236
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D +IR+WD G C ++L GH + V C+++ ++ S + D IKVW
Sbjct: 237 KDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVW 285
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/123 (30%), Positives = 62/123 (50%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + +
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGK 182
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG ++ I LWD G + RVL GH + + C+ ++ + + S + DG I+
Sbjct: 183 KLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIR 242
Query: 461 VWN 463
+W+
Sbjct: 243 IWD 245
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 261
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 124 SRDKTIKLWN 133
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 232
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 233 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 292 SADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 257 (95.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 67/237 (28%), Positives = 115/237 (48%)
Query: 244 DHKIVSGLRDNTI-KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D ++ D+ + ++ D + +K+L GH+G V + D ++S S D TVR+W
Sbjct: 492 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWS 551
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSN-GM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+ T + H V +FS G V+ DR +W + + R+ GH A
Sbjct: 552 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLA 608
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGS 414
V F + YI + S DRT+++W+ + VR GHK I L + R + +G+
Sbjct: 609 DVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGA 668
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469
+D + LWDI G + L+GH + + +RF D + + SG+ D +++W+ V A +
Sbjct: 669 TDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFE 725
Score = 232 (86.7 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 62/230 (26%), Positives = 107/230 (46%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN 302
D IV G D+T++VW V+ + ++ SV D +I S D R+ D
Sbjct: 461 DSSMIVGGFADSTVRVWS-VTPKKLR-------SVKAAA-DLSLIDKESDDVLERIMDEK 511
Query: 303 TGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
T + L H V FS +++CS+D ++ +W + + T GH V
Sbjct: 512 TASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQT---FTCLVGYKGHNYPV 568
Query: 361 NVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD 416
F Y VS DR ++W T + +R GH + C ++ + +GS+D
Sbjct: 569 WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSAD 628
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
T+RLWD+ G C+R+ GH+ + + F + + + +GA DG++ +W++
Sbjct: 629 RTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Score = 207 (77.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 50/189 (26%), Positives = 92/189 (48%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
D + ++S D T+++W + C+ GH V Q+ +SG D R+W
Sbjct: 534 DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA 593
Query: 301 VNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+ + + H V RF ++ + T S DR++ +WD+++ N + R+ GH+
Sbjct: 594 TDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCV---RIFTGHKG 650
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGS 414
++ + F +++ + + D + +W+ V L GH I L++ RD ++ SGS
Sbjct: 651 PIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGS 710
Query: 415 SDNTIRLWD 423
DNT+RLWD
Sbjct: 711 MDNTVRLWD 719
Score = 178 (67.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 56/242 (23%), Positives = 104/242 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DR-LVVSGSSDNTIRY-- 170
D I S D ++ + + ++ L GH + + DR ++S S D T+R
Sbjct: 492 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWS 551
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
F + +WD T + W + Q +
Sbjct: 552 LQTFTCLVGYKGHNYPVWD------TQFSPYGYYFVSGGHDRVARLWATDHY--QPLRIF 603
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RV 286
+ + V C ++ + + I +G D T+++WD ++ C+++ TGH G + L + R
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF 663
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSP 344
+ +G++D V +WD+ G MV L H + + LRFS +G ++ + S D ++ +WD V
Sbjct: 664 LATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKA 723
Query: 345 NE 346
E
Sbjct: 724 FE 725
Score = 44 (20.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 22/105 (20%), Positives = 39/105 (37%)
Query: 30 SVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCH 89
SV S S + P P + + P P+ + + K + ++ L +C
Sbjct: 389 SVGSKSKKQDPNA----PPQNRIPLPEL-KDSDKLDKVMNMKEAARRVRLGPECLPSICF 443
Query: 90 YQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
Y +N Y + + D D IV D T++VW+ +
Sbjct: 444 YTF--LNAY-QGLTAVDITD-----DSSMIVGGFADSTVRVWSVT 480
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 252 (93.8 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 93/368 (25%), Positives = 166/368 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEF 174
KY+ S SGD T++ W+ S+ T GH+ + + + + + SG + I D
Sbjct: 128 KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPS 187
Query: 175 ---QI--VSSSHDD--TILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRI 227
Q+ + H T L W+ L+ + P + W +R
Sbjct: 188 TGKQVGRALTGHSKWITALSWEPLHAN--PECRYVASSSKDGSVRV---WDTTAGRCERT 242
Query: 228 NCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV----LCLQY 282
+ +++ V CL++ D + S +D TIKVW + L GH V L Y
Sbjct: 243 --LTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 300
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD 340
R ++++V D+ G + L + +L G +V+ S D ++ +W
Sbjct: 301 ALRTGAFEPAEASVNAQDLR-GSL-QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWS 358
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
+ R + GH+A +N V F D + I SAS D++IK+W+ + +++ +L GH
Sbjct: 359 PAEDKKPLAR--MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA 416
Query: 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA 454
+ + + RL+VSGSSD+T+++WD++ L GH + V + + D +R+ SG
Sbjct: 417 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGG 476
Query: 455 YDGKIKVW 462
D +++W
Sbjct: 477 KDKCLRIW 484
Score = 239 (89.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 60/209 (28%), Positives = 106/209 (50%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R +C L GH+ +V+ + + + + SGS D+TVR WD++T T H VL
Sbjct: 102 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVL 161
Query: 319 HLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-------KY 369
+ +S +G + K+ I +WD + ++ R L GH + + ++ +Y
Sbjct: 162 SISWSPDGKKLASGCKNGQILLWDPSTGKQVG--RALTGHSKWITALSWEPLHANPECRY 219
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA 428
+ S+S D +++VW+T++ RTL GH + + CL++ D L+ S S D TI++W G
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 279
Query: 429 CLRVLEGHEELVRCIRFDAKRIV-SGAYD 456
R L+GH V + + +GA++
Sbjct: 280 LCRTLQGHGHWVNTMALSTDYALRTGAFE 308
Score = 227 (85.0 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 65/231 (28%), Positives = 114/231 (49%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGE 305
+ S +D +++VWD + +C + LTGH SV CL++ + ++ S S D T++VW + G
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGV 279
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
+ TL H V + S + + S+ D+ + R L + N
Sbjct: 280 LCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERAL----SRYN 335
Query: 362 VVDFD-EKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDN 417
+V + +VS S D T+ +W+ + + + + GH+ I + + R++ S S D
Sbjct: 336 LVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDK 395
Query: 418 TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
+I+LWD G L L GH V I + D++ +VSG+ D +KVW++ A
Sbjct: 396 SIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 446
Score = 225 (84.3 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 69/238 (28%), Positives = 114/238 (47%)
Query: 243 DDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYDE-------RVIISGSSDS 294
D K+ SG ++ I +WD Q + LTGH+ + L ++ R + S S D
Sbjct: 168 DGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDG 227
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
+VRVWD G TL H ++V LR+ +G++ + S+DR+I VW ++ L R L
Sbjct: 228 SVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVW---RAHDGVLCRTL 284
Query: 354 VGHRAAVNVVDFDEKYIVSASG----DRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDR 408
GH VN + Y + + ++ + S + ++ + + Q +R
Sbjct: 285 QGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPER 344
Query: 409 LVVSGSSDNTIRLWD-IECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
LV SGS D T+ LW E L + GH+ L+ + F D++ I S ++D IK+W+
Sbjct: 345 LV-SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD 401
Score = 182 (69.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 53/168 (31%), Positives = 82/168 (48%)
Query: 308 NTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++L H EAV+ + FS G + + S D ++ WD+ + T GHR V + +
Sbjct: 109 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCQGHRHWVLSISW 165
Query: 366 --DEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSS 415
D K + S + I +W+ S+ + V R L GH + I L + R V S S
Sbjct: 166 SPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSK 225
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIV-SGAYDGKIKVW 462
D ++R+WD G C R L GH + V C+R+ ++ S + D IKVW
Sbjct: 226 DGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVW 273
Score = 181 (68.8 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ SG D T++ WD + GH VL + + D + + SG + + +WD +TG
Sbjct: 130 LASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTG 189
Query: 305 EMVN-TLIHHCEAV-------LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
+ V L H + + LH + + SKD S+ VWD + R L GH
Sbjct: 190 KQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGR---CERTLTGH 246
Query: 357 RAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGS 414
+V + + + + SAS DRTIKVW RTL GH + + D + +G+
Sbjct: 247 AQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 306
Query: 415 ---SDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP 470
++ ++ D+ G+ + E +R +R+VSG+ D + +W+ P
Sbjct: 307 FEPAEASVNAQDLR-GSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 365
Query: 471 RAPTT 475
A T
Sbjct: 366 LARMT 370
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 353 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--R 408
L GH AV V F KY+ S SGD T++ W+ S+ T GH+ + + + +
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 409 LVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRFD-------AKRIVSGAYDGKIK 460
+ SG + I LWD G + R L GH + + + ++ + + S + DG ++
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 461 VWNLVAALDPRAPT----TTLCLR 480
VW+ A R T + CLR
Sbjct: 231 VWDTTAGRCERTLTGHAQSVTCLR 254
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 256 (95.2 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 69/250 (27%), Positives = 122/250 (48%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL----QYDERVIISGSSDS 294
C+ D ++ SG D I VWD V L+ + + H S+ + +D+ ++ +G+ DS
Sbjct: 516 CITGDSLRLYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAGA-DS 574
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
V+ WD+NT + + I V + + ++ T D+++ VWDM S + + L
Sbjct: 575 LVKEWDINTQQTIKE-IKESNEVNTIFIQDNLLYTGCNDKTVKVWDMRSYECV---KTLS 630
Query: 355 GHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS 414
GH A+ V + S S D+ I VWN ++ + GH+ + L + ++ SGS
Sbjct: 631 GHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNNMLYSGS 690
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYD-----GKIKVWNLVAALD 469
D TIR+WD++ C+ ++ + V + + I +G+ D K NL A+L+
Sbjct: 691 HDETIRIWDLKTTRCVNTIKCKDR-VETLHVTNQGIFAGSGDWLQVFSHDKYENL-ASLN 748
Query: 470 PRAPTTTLCL 479
R+ + LCL
Sbjct: 749 TRS--SILCL 756
Score = 246 (91.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 59/209 (28%), Positives = 102/209 (48%)
Query: 259 WDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWD-VNTGEMVNTLIH--HCE 315
WD S++ I + G C+ D + SGS+D + VWD V + N H
Sbjct: 498 WDLTSIKNIDTVRGLQSE--CITGDSLRLYSGSNDGQIGVWDAVELKHVTNIKAHGKSIR 555
Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
AV+ + ++T D + WD+ + T++ + + VN + + + +
Sbjct: 556 AVIKRPGFDQNILTAGADSLVKEWDINTQQ--TIKEIKESNE--VNTIFIQDNLLYTGCN 611
Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
D+T+KVW+ S E V+TL+GH R I + L+ SGS+D I +W++ G L +G
Sbjct: 612 DKTVKVWDMRSYECVKTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATGTILTNFQG 671
Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
HE V+ + + SG++D I++W+L
Sbjct: 672 HEGWVKTLYAHNNMLYSGSHDETIRIWDL 700
Score = 204 (76.9 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 50/191 (26%), Positives = 95/191 (49%)
Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS 291
+ S V + D+ + +G D T+KVWD S +C+K L+GHT ++ + ++ SGS
Sbjct: 591 KESNEVNTIFIQDNLLYTGCNDKTVKVWDMRSYECVKTLSGHTRAIKSVCAMGNLLFSGS 650
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR 351
+D + VW++ TG ++ H V L N M+ + S D +I +WD+ + + +
Sbjct: 651 NDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNNMLYSGSHDETIRIWDLKTTRCVNTIK 710
Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVV 411
+ V + + I + SGD ++V++ E + +LN + I CL +
Sbjct: 711 C----KDRVETLHVTNQGIFAGSGD-WLQVFSHDKYENLASLNT-RSSILCLWRNQNQLF 764
Query: 412 SGSSDNTIRLW 422
+GS + +++W
Sbjct: 765 TGSLASNLKVW 775
Score = 197 (74.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 52/220 (23%), Positives = 106/220 (48%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT 303
D I++ D+ +K WD + Q IK + + V + + ++ +G +D TV+VWD+ +
Sbjct: 564 DQNILTAGADSLVKEWDINTQQTIKEIK-ESNEVNTIFIQDNLLYTGCNDKTVKVWDMRS 622
Query: 304 GEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
E V TL H A+ + ++ + S D+ I VW++ + +T + GH V +
Sbjct: 623 YECVKTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATGTILTNFQ---GHEGWVKTL 679
Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
+ S S D TI++W+ + V T+ R + L ++ + +GS D ++++
Sbjct: 680 YAHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKDR-VETLHVTNQGIFAGSGD-WLQVFS 737
Query: 424 IECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
+ L L ++ C+ + ++ +G+ +KVW+
Sbjct: 738 HDKYENLASLNTRSSIL-CLWRNQNQLFTGSLASNLKVWS 776
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 61/279 (21%), Positives = 115/279 (41%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRYR 171
D + S S D I VW+ + V + H + I + R D+ +++ +D+ ++
Sbjct: 520 DSLRLYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAGADSLVKEW 579
Query: 172 DEF------QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQ 225
D +I S+ +TI I D L Y+ + W M + +
Sbjct: 580 DINTQQTIKEIKESNEVNTIFIQDNLLYTGCNDKTVKV-------------WDMRSY--E 624
Query: 226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
+ S +++ + + + + SG D I VW+ + + GH G V L
Sbjct: 625 CVKTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNN 684
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFSNGMMVTCSKDRSIAVWDMVSP 344
++ SGS D T+R+WD+ T VNT+ C + V L +N + S D W V
Sbjct: 685 MLYSGSHDETIRIWDLKTTRCVNTI--KCKDRVETLHVTNQGIFAGSGD-----WLQVFS 737
Query: 345 NEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
++ + R+++ + ++ + + S +KVW+
Sbjct: 738 HDKYENLASLNTRSSILCLWRNQNQLFTGSLASNLKVWS 776
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 232 (86.7 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 303 TGEMVNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
T + ++ H V L + S ++ T D + +W + PN I L GH +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS---LTGHTSP 65
Query: 360 VNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 415
V V + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWDI C+ GH + VRC+RF D K + S A D +K+W+L A
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 217 (81.4 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQ 281
LQ I + N + + + +G D + +W CI LTGHT V + L
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S+D +I +W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ + R GH AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 133 DIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 398 RGIACLQYR--DRLVVSGSSD 416
+ +++ + L+ SGSSD
Sbjct: 190 GPVNVVEFHPNEYLLASGSSD 210
Score = 214 (80.4 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 53/201 (26%), Positives = 96/201 (47%)
Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
LQ I + S++ + R++ +G D V +W +N + +L H V +R +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTI 379
++V S+ SI VWD+ + + R L+GH+A + +DF +++ S S D I
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
K+W+ V GH + + CL++ + + S + D+T++LWD+ G + GH
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 438 ELVRCIRFDAKR--IVSGAYD 456
V + F + SG+ D
Sbjct: 190 GPVNVVEFHPNEYLLASGSSD 210
Score = 121 (47.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 45/187 (24%), Positives = 83/187 (44%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-- 172
+ + + D + +W+ + + +L GH + ++ + L+V+GS +IR D
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+I+ + H I DF Y E + + R G R
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGE-----FVASGSQDTNIKLWDIRRKGCVFRYR---- 144
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV 286
+S+ V CL++ D K + S D+T+K+WD + + + GHTG V +++ +E +
Sbjct: 145 -GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 287 IISGSSD 293
+ SGSSD
Sbjct: 204 LASGSSD 210
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 247 (92.0 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 65/251 (25%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + +G D ++W L H G + L+++++ I+
Sbjct: 233 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKKGNYIL 291
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +CS D I V + +
Sbjct: 292 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 351
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 352 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKW 408
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD++ G C+ L H+E V + F D K + S
Sbjct: 409 SPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLAS 468
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 469 GSFDKCVHIWN 479
Score = 151 (58.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 46/175 (26%), Positives = 82/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 351 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 410
Query: 324 ----------NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD+ + + L H+ V V F D KY+
Sbjct: 411 TGPGTSNPNSNIMLASASFDSTVRLWDV--DRGVCIH-TLTKHQEPVYSVAFSPDGKYLA 467
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 468 SGSFDKCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 521
Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 41/198 (20%), Positives = 85/198 (42%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ +GS D R+W G + +TL H + L+++ +++ D++ +WD
Sbjct: 245 DGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 303
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
E ++ H A VD+ S S D I V V+T GH
Sbjct: 304 -AHTGEA--KQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 360
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--------- 448
+ +++ L+ S S D T+++W ++ C+ L+ H + + I++
Sbjct: 361 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNS 420
Query: 449 --RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 421 NIMLASASFDSTVRLWDV 438
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 47/199 (23%), Positives = 87/199 (43%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGE---MVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N ++ HC
Sbjct: 173 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 315 --EAVLHLRF-SNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ T S D +W + L L H+ + + +++K
Sbjct: 233 SNKDVTSLDWNSDGTLLATGSYDGFARIWT----EDGNLASTLGQHKGPIFALKWNKKGN 288
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S S+D I + + C
Sbjct: 289 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCD 348
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 349 RPVKTFQGHTNEVNAIKWD 367
Score = 53 (23.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + + S D ++W T TL HK I L++ + G+
Sbjct: 235 KDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNKK----GN- 288
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 289 -----Y-----ILSAGVDKTTIIWD 303
Score = 47 (21.6 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 119 IVSASGDRTIKVWN 132
+ S SGD T ++WN
Sbjct: 193 LASGSGDSTARIWN 206
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 289 YILSAGVDKTTIIWDAHTGE 308
Score = 38 (18.4 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTAR 203
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 249 (92.7 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 69/239 (28%), Positives = 120/239 (50%)
Query: 237 VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSV--LCLQYDERVIISGS 291
V C+Q+ H + S RD T+++W S++ VL HTGSV +C D + +++ S
Sbjct: 63 VTCVQFSPSAHLLASSSRDKTVRLWVP-SVKGESVLFRAHTGSVRSVCFSADGQSLLTAS 121
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITL 349
D ++++W V+ +++ TL H V RFS +G +MV+ S DR++ +WD S I
Sbjct: 122 DDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHT 181
Query: 350 RRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
G+ + VDF I +AS D T++VW+ + ++ H + L +
Sbjct: 182 FCEPGGYSS---YVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHP 238
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVW 462
+++ SSD+T+++ D+ G L L GH+ C+ F + S D ++ VW
Sbjct: 239 SGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 228 (85.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 69/232 (29%), Positives = 110/232 (47%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNT 303
+I SG D ++ VW+ TGH +V C+Q+ ++ S S D TVR+W +
Sbjct: 32 QIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSV 91
Query: 304 -GEMVNTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRAA 359
GE V H +V + FS +G ++T S D+SI +W + I TLR H
Sbjct: 92 KGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLRE----HNNW 146
Query: 360 VNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL--NGHKRGIACLQYRDRLVVSGSS 415
V F D + +VS S DRT+K+W+ SS + + T G + + SS
Sbjct: 147 VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASS 206
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
DNT+R+WDI L+ + H V + F +++ + D +K+ +L+
Sbjct: 207 DNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Score = 228 (85.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 86/309 (27%), Positives = 132/309 (42%)
Query: 105 RDFISLLPNFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVV 160
RD I+ L +F K I S S D ++ VWN GHK + C+Q+ L+
Sbjct: 18 RDAITSL-DFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLA 76
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
S S D T+R V S +++L S + + + ++
Sbjct: 77 SSSRDKTVRLW-----VPSVKGESVLFRAHTG-SVRSVCFSADGQSLLTASD-DQSIKLW 129
Query: 221 KFLLQRINCR-SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTG 275
Q+I C E++ V C ++ D +VS D T+K+WD S Q I G
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS 189
Query: 276 SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKD 333
S + I + SSD+TVRVWD+ T ++ H AV L F S ++T S D
Sbjct: 190 SYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSD 249
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTS--SCEF 389
++ + D++ E L L GH+ + + V F SA D+ + VW T+ S ++
Sbjct: 250 STLKILDLL---EGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDY 306
Query: 390 VRTLNGHKR 398
R L KR
Sbjct: 307 SRVLQ-QKR 314
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 348 TLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
TL R GHR A+ +DF K I S S D ++ VWN GHK + C+Q+
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQF 68
Query: 406 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDAKRIVSGAYDGKIKV 461
L+ S S D T+RLW + H VR C D + +++ + D IK+
Sbjct: 69 SPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 462 WNL 464
W++
Sbjct: 129 WSV 131
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 230 (86.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 61/239 (25%), Positives = 121/239 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D+ ++S D+ IK+W+R +LQCI+ + LC + +R ++ G+ ++++D
Sbjct: 425 DNIAVLSAAADS-IKIWNRSTLQCIRTMPCEYA--LCSFFVPGDRQVVIGTKTGNLQLYD 481
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD--MVSPNEITLRRVLVGH 356
+ +G ++ T+ H A+ + S VT D+++ WD +V+ T +R+ V
Sbjct: 482 LASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQ 541
Query: 357 RAAVNV------VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ--YR 406
+ + V + ++K + + D T+KV+ + +F +L GHK + C+ +
Sbjct: 542 TRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHD 601
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
L+ +GS+D +++W ++ G C R L H++ V +RF K + D KIK W+
Sbjct: 602 GALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660
Score = 208 (78.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 75/284 (26%), Positives = 133/284 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D ++SA+ D +IK+WN S+ + +RT+ + DR VV G+ ++ D
Sbjct: 425 DNIAVLSAAAD-SIKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNLQLYD-- 481
Query: 175 QIVSSSHDDTILIWD--FLNYSETPIQXXXXXXXXXXXXXI-ENNWRMGKFLLQ-RINCR 230
+ S + +TI D + S +P Q + K Q R++ +
Sbjct: 482 -LASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVK 540
Query: 231 SENS----KGVYCLQYD-DHKIVS-GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--Y 282
+ + V C+ Y + K+++ L D T+KV+ +L+ L GH VLC+ +
Sbjct: 541 QTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISH 600
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
D +I +GS+D V++W ++ G+ +L H ++V++LRF + + T KD I WD
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 341 MVSPNEITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVW 382
I + L GH + V Y+VSAS D+++++W
Sbjct: 661 ADKFEHI---QTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 187 (70.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 51/177 (28%), Positives = 89/177 (50%)
Query: 258 VWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+WD + I +L G+ V CL D + G D +R++ + +GE T H
Sbjct: 49 IWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKA 108
Query: 316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
AV L++ G + + SKD + +WD++ NE L R L GH+ AV F + +V
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDVIIWDVI--NESGLYR-LKGHKDAVTQALFLRERNLLV 165
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIE 425
++ D +K W+ + +T+ GH+ G+ + RL+ +G++D+ +R WDI+
Sbjct: 166 TSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLI-TGAADSELRAWDID 221
Score = 180 (68.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 56/240 (23%), Positives = 113/240 (47%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDV 301
D ++V G + ++++D S ++ + H G++ + L D+R ++G +D V+ WD
Sbjct: 465 DRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDF 524
Query: 302 -------NTGEMVNT----LIHHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVSPNEIT 348
+T + ++ + E VL + +S N ++ S D ++ V+ V +
Sbjct: 525 ELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVF-YVDTLKFF 583
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY- 405
L L GH+ V +D D I + S DR +K+W + R+L H + L++
Sbjct: 584 LS--LYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFV 641
Query: 406 -RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
+ L + D+ I+ WD + ++ LEGH + + C+ +VS ++D +++W
Sbjct: 642 PKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 169 (64.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 47/178 (26%), Positives = 91/178 (51%)
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVS-PNEITLRRV 352
V +WD+ GE + L + + V L S +G+ + +D +I ++ ++S IT
Sbjct: 47 VFIWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFN-- 104
Query: 353 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR- 408
GH+AAV + +D+ + S S D + +W+ + + L GHK + L R+R
Sbjct: 105 --GHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERN 162
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWNL 464
L+V+ D ++ WD++ C + + GH V + + KR+++GA D +++ W++
Sbjct: 163 LLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI 220
Score = 165 (63.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 58/204 (28%), Positives = 96/204 (47%)
Query: 240 LQYDDHKIVSGLRDNTIKVWD------------RVSLQCIKVLTGHTGSVLCLQY--DER 285
L D V+G D +K WD R+S++ + L VLC+ Y +++
Sbjct: 503 LSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDE-DVLCVSYSPNQK 561
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVS 343
++ D TV+V+ V+T + +L H VL + S+ ++ T S DR++ +W +
Sbjct: 562 LLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDF 621
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIA 401
+ R L H +V + F K ++ +G D IK W+ E ++TL GH + I
Sbjct: 622 GD---CHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 678
Query: 402 CLQYRDR--LVVSGSSDNTIRLWD 423
CL VVS S D ++RLW+
Sbjct: 679 CLAVSPSGDYVVSASHDKSLRLWE 702
Score = 157 (60.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 48/160 (30%), Positives = 79/160 (49%)
Query: 233 NSKGVYCL--QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--II 288
N + V CL D + G D I+++ +S + GH +V L+YD+ +
Sbjct: 64 NKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGGRLA 123
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAV---LHLRFSNGMMVTCSKDRSIAVWDMVSPN 345
SGS D+ V +WDV + L H +AV L LR N ++VT KD + WD+ N
Sbjct: 124 SGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERN-LLVTSGKDTMVKWWDL--DN 180
Query: 346 EITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWN 383
+ + +VGHR V V+ +EK +++ + D ++ W+
Sbjct: 181 QHCFK-TMVGHRTEVWGLVLVSEEKRLITGAADSELRAWD 219
Score = 153 (58.9 bits), Expect = 8.5e-17, Sum P(3) = 8.5e-17
Identities = 49/196 (25%), Positives = 88/196 (44%)
Query: 293 DSTVRVWDVNTGEMVNT--LIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
D +RV + T + + LIH + L F N ++ S + S+ V + IT
Sbjct: 350 DEILRVAKIKTSAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLNASLPAPQPVRTSRIT 409
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
+ GHR+ V + F D ++SA+ D +IK+WN S+ + +RT+ +
Sbjct: 410 IG----GHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMPCEYALCSFFVPG 464
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
DR VV G+ ++L+D+ G L + H+ + + D + V+G D +K W+
Sbjct: 465 DRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDF 524
Query: 465 VAALDPRAPTTTLCLR 480
D + L ++
Sbjct: 525 ELVTDKNSTQKRLSVK 540
Score = 123 (48.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 49/213 (23%), Positives = 98/213 (46%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH V L + D ++S ++DS +++W+ +T + + T+ CE L F G +
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQCIRTM--PCEYALCSFFVPGDRQV 468
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW----- 382
V +K ++ ++D+ S + G ++++ D++ V+ D+ +K W
Sbjct: 469 VIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSP-DQRGFVTGGADKAVKFWDFELV 527
Query: 383 ---NTS----SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL 433
N++ S + RTL + + C+ Y +L+ D T++++ ++ L
Sbjct: 528 TDKNSTQKRLSVKQTRTLQLDE-DVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSL 586
Query: 434 EGHEELVRC--IRFDAKRIVSGAYDGKIKVWNL 464
GH+ V C I D I +G+ D +K+W L
Sbjct: 587 YGHKLPVLCMDISHDGALIATGSADRNVKIWGL 619
Score = 107 (42.7 bits), Expect = 8.5e-17, Sum P(3) = 8.5e-17
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVN 302
+ SG +D +K WD + C K + GH V L L +E+ +I+G++DS +R WD++
Sbjct: 165 VTSG-KDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDID 221
Score = 75 (31.5 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS 163
+++ L P+ D ++ D I++++ S E T NGHK + L+Y D+L G
Sbjct: 65 KQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKY-DQL---GG 120
Query: 164 SDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194
++ S S D ++IWD +N S
Sbjct: 121 -----------RLASGSKDTDVIIWDVINES 140
Score = 61 (26.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 116 EKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYR 171
E+ ++ SG D +K W+ + +T+ GH+ G+ + RL+ +G++D+ +R
Sbjct: 160 ERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLI-TGAADSELRAW 218
Query: 172 D 172
D
Sbjct: 219 D 219
Score = 60 (26.2 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR-LVVSGSSDNTIRYRD 172
+ S S D + +W+ + + L GHK + L R+R L+V+ D +++ D
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWD 177
Score = 46 (21.3 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 130 VWNTSSCEFVRTLNGHKRGIACL-QYRDRLVVS-GSSDNTIR 169
+W+ E + L G+K+ + CL D L ++ G D IR
Sbjct: 49 IWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIR 90
Score = 37 (18.1 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 4/18 (22%), Positives = 12/18 (66%)
Query: 115 DEKYIVSASGDRTIKVWN 132
+EK +++ + D ++ W+
Sbjct: 202 EEKRLITGAADSELRAWD 219
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 255 (94.8 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 63/230 (27%), Positives = 117/230 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVWDVNTG 304
+++ L + ++ VW+ + +K V ++ R +++G+ D +RV++ NT
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 305 EMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E V+ H + + + + + ++T S D I +WD + + +V GH V
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW--DKKWSCSQVFEGHTHYVMQ 118
Query: 363 VDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DR-LVVSGSS 415
+ D SAS DRTIKVW S TL GH++G+ C+ Y D+ ++SG+
Sbjct: 119 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 178
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
D +++WD + C++ LEGH + V C F + I++G+ DG +++W+
Sbjct: 179 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Score = 175 (66.7 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 40 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 99
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 100 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 151
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 152 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 211
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 212 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 257
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 119
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 120 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 179
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 180 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 236
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 237 TLNYGMERVWCV 248
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 9 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 66
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 67 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 126
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 127 NQFASASLDRTIKVWQL 143
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00072
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR--Y 170
D+ Y++S + DR +K+W+ + V+TL GH + ++C + L +++GS D T+R +
Sbjct: 169 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Query: 171 RDEFQIVSSSHDDTILIW 188
+++ S+ + +W
Sbjct: 229 SSTYRLESTLNYGMERVW 246
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 231 (86.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 62/216 (28%), Positives = 108/216 (50%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
D TIK+WD +CI+ + GH +V + + + I+S S D T+++W+V TG V T
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 311 IHHCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H E V +R + +G ++ +CS D+++ VW +V+ E + L H V + + +
Sbjct: 63 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKEC--KAELREHEHVVECISWAPE 119
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
S+ + T +VR + H G + ++S + D T+R+WD +
Sbjct: 120 SSYSSISEATGS--EVGHDNWVRGVLFHSGG--------KFILSCADDKTLRVWDYKNKR 169
Query: 429 CLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
C++ L HE V + F A +V+G+ D +KVW
Sbjct: 170 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 69/217 (31%), Positives = 105/217 (48%)
Query: 217 WRMGKF-LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275
W F ++ ++ N V + DH IVS RD TIK+W+ + C+K TGH
Sbjct: 9 WDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHRE 67
Query: 276 SVLCLQ--YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKD 333
V ++ D +I S S+D TVRVW V T E C+A L + +V C
Sbjct: 68 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKE--------CKAELR---EHEHVVECISW 116
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVR 391
+ + +S E T V GH V V F K+I+S + D+T++VW+ + ++
Sbjct: 117 APESSYSSIS--EATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 172
Query: 392 TLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
TLN H+ + L + VV+GS D T+++W EC
Sbjct: 173 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 207
Score = 168 (64.2 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 37/104 (35%), Positives = 59/104 (56%)
Query: 374 SGDRTIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACL 430
S D TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C+
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 59
Query: 431 RVLEGHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
+ GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 102
Score = 160 (61.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 30 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 87
Query: 166 NTIRY----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
T+R E + H+ + + ++++ P +NW G
Sbjct: 88 QTVRVWVVATKECKAELREHEHVV---ECISWA--PESSYSSISEATGSEVGHDNWVRGV 142
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
+S G + L D D T++VWD + +C+K L H V L
Sbjct: 143 LF---------HSGGKFILSCAD--------DKTLRVWDYKNKRCMKTLNAHEHFVTSLD 185
Query: 282 YDERV--IISGSSDSTVRVWD 300
+ + +++GS D TV+VW+
Sbjct: 186 FHKTAPYVVTGSVDQTVKVWE 206
Score = 153 (58.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 40/117 (34%), Positives = 61/117 (52%)
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE 388
S D +I +WD I R + GH V+ V + +IVSAS D+TIK+W +
Sbjct: 1 SADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 57
Query: 389 FVRTLNGHKRGIACLQ-YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
V+T GH+ + ++ +D L+ S S+D T+R+W + C L HE +V CI
Sbjct: 58 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 114
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/225 (30%), Positives = 111/225 (49%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 219 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK 278
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + +WD+ + + L GH AV V
Sbjct: 279 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV---HTLSGHTNAVATV 335
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTI 419
E I++ S D TI++W+ + + TL HK+ + L R SGS DN I
Sbjct: 336 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-I 394
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
+ W G+ ++ L GH ++ + ++ + VSGA +G + +W+
Sbjct: 395 KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWD 439
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 60/205 (29%), Positives = 108/205 (52%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V++GH G V C+ + + ++GS+D T+++WD+ +G++ +L H V + S
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + +C +D+ + WD+ N++ R GH +AV +D +V+ S D T ++
Sbjct: 257 SPYLFSCGEDKQVKCWDL-EYNKVI--RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V TL+GH +A + Q + +++GS D TIRLWD+ G L H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 373
Query: 440 VRCIRFDAKR--IVSGAYDGKIKVW 462
VR + + SG+ D IK W
Sbjct: 374 VRAVVLHPRHYTFASGSPDN-IKQW 397
Score = 223 (83.6 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 59/181 (32%), Positives = 88/181 (48%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S DST R+WDV T V+TL
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 325
Query: 311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H AV +R + ++T S D +I +WD+V+ R L H+ +V V +
Sbjct: 326 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT---RVTLTNHKKSVRAVVLHPR 382
Query: 369 YIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
+ ASG IK W F++ L+GH I L D ++VSG+ + T+ LWD
Sbjct: 383 HYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRT 442
Query: 427 G 427
G
Sbjct: 443 G 443
Score = 201 (75.8 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V +V Y+ S D+ +K
Sbjct: 215 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKC 271
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L + +V+ S D+T R+WD+ A + L GH
Sbjct: 272 WDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 331
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVWNLVA 466
V +R A +I++G++D I++W+LVA
Sbjct: 332 VATVRCQAAEPQIITGSHDTTIRLWDLVA 360
Score = 144 (55.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTG 304
+V+ RD+T ++WD + + L+GHT +V + Q E II+GS D+T+R+WD+ G
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 361
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ TL +H ++V + S +I W P+ ++ L GH A +N +
Sbjct: 362 KTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKF--PDGSFIQN-LSGHNAIINTL 418
Query: 364 DFD-EKYIVSASGDRTIKVWN 383
+ + +VS + + T+ +W+
Sbjct: 419 TVNSDGVLVSGADNGTMHLWD 439
Score = 119 (46.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDS 294
V C Q + +I++G D TI++WD V+ + LT H SV + R SGS D+
Sbjct: 335 VRC-QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN 393
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
++ W G + L H + L S+G++V+ + + ++ +WD +
Sbjct: 394 -IKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAA 452
Query: 354 V-----GHRAAVNVVDFD--EKYIVSASGDRTIKVW 382
V + + FD E +++A D+TIKV+
Sbjct: 453 VQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 488
Score = 72 (30.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+ + R + S D ++ D
Sbjct: 216 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI-VSTRSPYLFSCGEDKQVKCWDL 274
Query: 173 EF-QIVSSSH 181
E+ +++ H
Sbjct: 275 EYNKVIRHYH 284
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/225 (30%), Positives = 111/225 (49%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 220 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK 279
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + +WD+ + + L GH AV V
Sbjct: 280 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV---HTLSGHTNAVATV 336
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTI 419
E I++ S D TI++W+ + + TL HK+ + L R SGS DN I
Sbjct: 337 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-I 395
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
+ W G+ ++ L GH ++ + ++ + VSGA +G + +W+
Sbjct: 396 KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWD 440
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 60/205 (29%), Positives = 108/205 (52%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V++GH G V C+ + + ++GS+D T+++WD+ +G++ +L H V + S
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 257
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + +C +D+ + WD+ N++ R GH +AV +D +V+ S D T ++
Sbjct: 258 SPYLFSCGEDKQVKCWDL-EYNKVI--RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V TL+GH +A + Q + +++GS D TIRLWD+ G L H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 374
Query: 440 VRCIRFDAKR--IVSGAYDGKIKVW 462
VR + + SG+ D IK W
Sbjct: 375 VRAVVLHPRHYTFASGSPDN-IKQW 398
Score = 223 (83.6 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 59/181 (32%), Positives = 88/181 (48%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S DST R+WDV T V+TL
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H AV +R + ++T S D +I +WD+V+ R L H+ +V V +
Sbjct: 327 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT---RVTLTNHKKSVRAVVLHPR 383
Query: 369 YIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
+ ASG IK W F++ L+GH I L D ++VSG+ + T+ LWD
Sbjct: 384 HYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRT 443
Query: 427 G 427
G
Sbjct: 444 G 444
Score = 201 (75.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V +V Y+ S D+ +K
Sbjct: 216 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKC 272
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L + +V+ S D+T R+WD+ A + L GH
Sbjct: 273 WDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 332
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVWNLVA 466
V +R A +I++G++D I++W+LVA
Sbjct: 333 VATVRCQAAEPQIITGSHDTTIRLWDLVA 361
Score = 144 (55.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTG 304
+V+ RD+T ++WD + + L+GHT +V + Q E II+GS D+T+R+WD+ G
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 362
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ TL +H ++V + S +I W P+ ++ L GH A +N +
Sbjct: 363 KTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKF--PDGSFIQN-LSGHNAIINTL 419
Query: 364 DFD-EKYIVSASGDRTIKVWN 383
+ + +VS + + T+ +W+
Sbjct: 420 TVNSDGVLVSGADNGTMHLWD 440
Score = 119 (46.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDS 294
V C Q + +I++G D TI++WD V+ + LT H SV + R SGS D+
Sbjct: 336 VRC-QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN 394
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
++ W G + L H + L S+G++V+ + + ++ +WD +
Sbjct: 395 -IKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAA 453
Query: 354 V-----GHRAAVNVVDFD--EKYIVSASGDRTIKVW 382
V + + FD E +++A D+TIKV+
Sbjct: 454 VQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 489
Score = 72 (30.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+ + R + S D ++ D
Sbjct: 217 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI-VSTRSPYLFSCGEDKQVKCWDL 275
Query: 173 EF-QIVSSSH 181
E+ +++ H
Sbjct: 276 EYNKVIRHYH 285
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/225 (30%), Positives = 111/225 (49%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 221 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK 280
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + +WD+ + + L GH AV V
Sbjct: 281 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV---HTLSGHTNAVATV 337
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTI 419
E I++ S D TI++W+ + + TL HK+ + L R SGS DN I
Sbjct: 338 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-I 396
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
+ W G+ ++ L GH ++ + ++ + VSGA +G + +W+
Sbjct: 397 KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWD 441
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 60/205 (29%), Positives = 108/205 (52%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V++GH G V C+ + + ++GS+D T+++WD+ +G++ +L H V + S
Sbjct: 199 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 258
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + +C +D+ + WD+ N++ R GH +AV +D +V+ S D T ++
Sbjct: 259 SPYLFSCGEDKQVKCWDL-EYNKVI--RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 315
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V TL+GH +A + Q + +++GS D TIRLWD+ G L H++
Sbjct: 316 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 375
Query: 440 VRCIRFDAKR--IVSGAYDGKIKVW 462
VR + + SG+ D IK W
Sbjct: 376 VRAVVLHPRHYTFASGSPDN-IKQW 399
Score = 223 (83.6 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 59/181 (32%), Positives = 88/181 (48%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S DST R+WDV T V+TL
Sbjct: 268 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 327
Query: 311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H AV +R + ++T S D +I +WD+V+ R L H+ +V V +
Sbjct: 328 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT---RVTLTNHKKSVRAVVLHPR 384
Query: 369 YIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
+ ASG IK W F++ L+GH I L D ++VSG+ + T+ LWD
Sbjct: 385 HYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRT 444
Query: 427 G 427
G
Sbjct: 445 G 445
Score = 201 (75.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V +V Y+ S D+ +K
Sbjct: 217 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKC 273
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L + +V+ S D+T R+WD+ A + L GH
Sbjct: 274 WDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 333
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVWNLVA 466
V +R A +I++G++D I++W+LVA
Sbjct: 334 VATVRCQAAEPQIITGSHDTTIRLWDLVA 362
Score = 144 (55.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTG 304
+V+ RD+T ++WD + + L+GHT +V + Q E II+GS D+T+R+WD+ G
Sbjct: 304 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 363
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ TL +H ++V + S +I W P+ ++ L GH A +N +
Sbjct: 364 KTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKF--PDGSFIQN-LSGHNAIINTL 420
Query: 364 DFD-EKYIVSASGDRTIKVWN 383
+ + +VS + + T+ +W+
Sbjct: 421 TVNSDGVLVSGADNGTMHLWD 441
Score = 119 (46.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDS 294
V C Q + +I++G D TI++WD V+ + LT H SV + R SGS D+
Sbjct: 337 VRC-QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN 395
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
++ W G + L H + L S+G++V+ + + ++ +WD +
Sbjct: 396 -IKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAA 454
Query: 354 V-----GHRAAVNVVDFD--EKYIVSASGDRTIKVW 382
V + + FD E +++A D+TIKV+
Sbjct: 455 VQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 490
Score = 72 (30.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+ + R + S D ++ D
Sbjct: 218 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI-VSTRSPYLFSCGEDKQVKCWDL 276
Query: 173 EF-QIVSSSH 181
E+ +++ H
Sbjct: 277 EYNKVIRHYH 286
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 255 (94.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 63/230 (27%), Positives = 117/230 (50%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTVRVWDVNTG 304
+++ L + ++ VW+ + +K V ++ R +++G+ D +RV++ NT
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 305 EMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
E V+ H + + + + + ++T S D I +WD + + +V GH V
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW--DKKWSCSQVFEGHTHYVMQ 118
Query: 363 VDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DR-LVVSGSS 415
+ D SAS DRTIKVW S TL GH++G+ C+ Y D+ ++SG+
Sbjct: 119 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 178
Query: 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
D +++WD + C++ LEGH + V C F + I++G+ DG +++W+
Sbjct: 179 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Score = 175 (66.7 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 57/226 (25%), Positives = 99/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 40 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 99
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 100 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 151
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ L GH +V C +
Sbjct: 152 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 211
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 212 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 257
Score = 158 (60.7 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 119
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 120 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 179
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + L GH V+ F + I++ S D T+++W++S+
Sbjct: 180 RLVKIWDY--QNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLES 236
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 237 TLNYGMERVWCV 248
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 9 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 66
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 67 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 126
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 127 NQFASASLDRTIKVWQL 143
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 249 (92.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 71/218 (32%), Positives = 106/218 (48%)
Query: 267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH-----------H 313
I+VL GH S+ CL D+ I S + D T+ W V TG ++ + H
Sbjct: 139 IRVLRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKGAQGQPAGH 198
Query: 314 CEAVLHLRFSNGMMVTCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KY 369
VL + S+ S DRS I +W+ S + GHR AV+ + F +
Sbjct: 199 SSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLY---TFTGHRDAVSGLAFRKGTHQ 255
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 427
+ S S DR++KVWN + +V TL GH+ +A L R+ V +G D T+R+W I
Sbjct: 256 LYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEE 315
Query: 428 ACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNL 464
+ L V GH+ + CI + + +VSGA DG + +W L
Sbjct: 316 SQL-VFYGHQGSIDCIHLINEEHMVSGADDGSVALWGL 352
Score = 181 (68.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 233 NSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVII 288
+S V C+ D K + SG R I +W+ S Q + TGH +V L + +
Sbjct: 198 HSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLY 257
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL-RFSNGMMVTCS-KDRSIAVWDMVSPNE 346
S S D +V+VW+ V TL H +AV L S VT +D ++ VW + P E
Sbjct: 258 STSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKI--PEE 315
Query: 347 ITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSS---CEFVRTLNG-HKR--- 398
L V GH+ +++ + +E+++VS + D ++ +W S R +G H
Sbjct: 316 SQL--VFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGEPGL 373
Query: 399 -------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
+A L D LV +GS + +RLW +CG R L+
Sbjct: 374 EQPFWVSSVAALLNTD-LVATGSHNARVRLW--QCGEGFRQLD 413
Score = 176 (67.0 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH+ VLC+ D + + SG + +W+ + + + T H +AV L F G +
Sbjct: 197 GHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQL 256
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD-FDEKYIVSASG-DRTIKVWNTS 385
+ S DRS+ VW+ + + L GH+ AV +D + V+A G D T++VW
Sbjct: 257 YSTSHDRSVKVWNAAENSYV---ETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIP 313
Query: 386 SCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRV------LEGHEE 438
E GH+ I C+ + +VSG+ D ++ LW + L + L G
Sbjct: 314 E-ESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGEPG 372
Query: 439 L-----VRCIR--FDAKRIVSGAYDGKIKVW 462
L V + + + +G+++ ++++W
Sbjct: 373 LEQPFWVSSVAALLNTDLVATGSHNARVRLW 403
Score = 49 (22.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 139 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 168
+R L GH+ I CL D + S + D TI
Sbjct: 139 IRVLRGHQLSITCLVITPDDLAIFSAAKDCTI 170
Score = 38 (18.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 148
D+ I SA+ D TI W+ + + + K+G
Sbjct: 157 DDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKG 190
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 66/206 (32%), Positives = 103/206 (50%)
Query: 267 IKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN 324
++V++GHTG V + D+ +GS+D+T++VWD+ +GE+ TL H A+ L S+
Sbjct: 200 MRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSS 259
Query: 325 G--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIK 380
+ + +D + WD+ S ++ R GHR V V V SG D ++
Sbjct: 260 RHPYLFSVGEDNKVLCWDLESNKQV---RNYYGHRQGVYSVALHPTLDVLFSGGRDNCVR 316
Query: 381 VWNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438
VW+ + + + GHK I L Q D V+SGS D T++LWD+ G L H++
Sbjct: 317 VWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKK 376
Query: 439 LVRCIRFDAKR--IVSGAYDGKIKVW 462
VR + K +GA D IK W
Sbjct: 377 GVRSMVIHEKEYSFATGAADN-IKQW 401
Score = 246 (91.7 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 61/224 (27%), Positives = 108/224 (48%)
Query: 249 SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEM 306
+G DNTIKVWD S + LTGH ++ L+ R + S D+ V WD+ + +
Sbjct: 224 TGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQ 283
Query: 307 VNTLIHHCEAVLHLRFSNGMMVTCS--KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
V H + V + + V S +D + VWDM + I + GH+ + +
Sbjct: 284 VRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMK---GHKGTILSLK 340
Query: 365 FD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIR 420
+ ++S S D T+K+W+ ++ TL HK+G+ + ++ +G++DN I+
Sbjct: 341 SQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADN-IK 399
Query: 421 LWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
W G+ ++ L GH ++ + +A + VSG +G I W+
Sbjct: 400 QWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWD 443
Score = 199 (75.1 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
DN + WD S + ++ GH V + L V+ SG D+ VRVWD+ T + +
Sbjct: 270 DNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEM 329
Query: 311 IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV-NVVDFDE 367
H +L L+ N +++ S D ++ +WD+ + T L H+ V ++V ++
Sbjct: 330 KGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATG---TSAATLTNHKKGVRSMVIHEK 386
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
+Y + IK W F++ L+GH I + D ++VSG + +I WD +
Sbjct: 387 EYSFATGAADNIKQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKT 446
Query: 427 GACLR 431
G C +
Sbjct: 447 GYCFQ 451
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIK 380
SN T S D +I VWD+ S L+ L GH +A+ ++ + Y+ S D +
Sbjct: 218 SNEWFATGSTDNTIKVWDLASGE---LKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVL 274
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQYRDRLVV--SGSSDNTIRLWDIECGACLRVLEGHEE 438
W+ S + VR GH++G+ + L V SG DN +R+WD+ A + ++GH+
Sbjct: 275 CWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKG 334
Query: 439 LVRCIRFDAK--RIVSGAYDGKIKVWNLVAALDPRAPTTT 476
+ ++ +++SG+ D +K+W+L A A T T
Sbjct: 335 TILSLKSQNADPQVISGSMDTTVKLWDL--ATGTSAATLT 372
Score = 176 (67.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 71/272 (26%), Positives = 123/272 (45%)
Query: 137 EFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWD 189
+ +R ++GH R IA + + +GS+DNTI+ D E ++ + H I +
Sbjct: 198 KLMRVISGHTGWVRAIA-VDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLE 256
Query: 190 FLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDD--HKI 247
S P +E+N ++ + R +GVY + +
Sbjct: 257 VS--SRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHR--------QGVYSVALHPTLDVL 306
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTGE 305
SG RDN ++VWD + I + GH G++L L Q + +ISGS D+TV++WD+ TG
Sbjct: 307 FSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGT 366
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
TL +H + V + + T + D +I W P+ ++ L GH + +N +
Sbjct: 367 SAATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQWKC--PDGSFIKN-LSGHNSIINAM 422
Query: 364 DFDEKYIVSASGDR-TIKVWN--TSSCEFVRT 392
+ ++ + GD +I W+ T C F +T
Sbjct: 423 ALNADNVLVSGGDNGSISFWDWKTGYC-FQKT 453
Score = 75 (31.5 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI 168
++ + S D TIKVW+ +S E TL GH I L+ R + S DN +
Sbjct: 220 EWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKV 273
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 62/205 (30%), Positives = 108/205 (52%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V++GH G V C+ + + ++GS+D T+++WD+ +G++ +L H V + S
Sbjct: 200 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSAR 259
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + +C +D+ + WD+ N++ R GH +AV +D +V+ S D T ++
Sbjct: 260 SPYLFSCGEDKQVKCWDL-EYNKVI--RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V TL+GH +A + Q + VV+GS D TIRLWD+ G L H++
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKS 376
Query: 440 VRCIRFDAKR--IVSGAYDGKIKVW 462
VR + + SG+ D IK W
Sbjct: 377 VRAVILHPRHYTFASGSPDN-IKQW 400
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 68/225 (30%), Positives = 110/225 (48%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 222 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNK 281
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + +WD+ + + L GH AV V
Sbjct: 282 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV---HTLSGHTNAVATV 338
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTI 419
E +V+ S D TI++W+ + + TL HK+ + L R SGS DN I
Sbjct: 339 KCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-I 397
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
+ W G ++ L GH ++ + ++ + VSGA +G + +W+
Sbjct: 398 KQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWD 442
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 70/227 (30%), Positives = 106/227 (46%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S DST R+WDV T V+TL
Sbjct: 269 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 328
Query: 311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H AV ++ + +VT S D +I +WD+V+ R L H+ +V V +
Sbjct: 329 SGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKT---RVTLTNHKKSVRAVILHPR 385
Query: 369 YIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
+ ASG IK W F++ L+GH I L D ++VSG+ + T+ LWD
Sbjct: 386 HYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRT 445
Query: 427 GACL-RV--------LEGHEELVRCIRFDAK--RIVSGAYDGKIKVW 462
G RV L+ + C+ FD R+++ D IKV+
Sbjct: 446 GYNFQRVHAAVQPGSLDSESGIFACV-FDQSESRLLTAEADKTIKVY 491
Score = 198 (74.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 46/149 (30%), Positives = 77/149 (51%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V +V Y+ S D+ +K
Sbjct: 218 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKC 274
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L + +V+ S D+T R+WD+ A + L GH
Sbjct: 275 WDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 334
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVWNLVA 466
V ++ A ++V+G++D I++W+LVA
Sbjct: 335 VATVKCQAAEPQVVTGSHDTTIRLWDLVA 363
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 63/281 (22%), Positives = 120/281 (42%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+ + R + S D ++ D
Sbjct: 219 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI-VSARSPYLFSCGEDKQVKCWDL 277
Query: 173 EF-QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRS 231
E+ +++ H ++ + + + K + ++ +
Sbjct: 278 EYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT-----KASVHTLSGHT 332
Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIIS 289
V C Q + ++V+G D TI++WD V+ + LT H SV + R S
Sbjct: 333 NAVATVKC-QAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFAS 391
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEIT 348
GS D+ ++ W G + L H + L S+G++V+ + + ++ +WD +
Sbjct: 392 GSPDN-IKQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQ 450
Query: 349 LRRVLV--GHRAAVN-----VVDFDEKYIVSASGDRTIKVW 382
V G + + V D E +++A D+TIKV+
Sbjct: 451 RVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTIKVY 491
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 249 (92.7 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 68/225 (30%), Positives = 110/225 (48%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 219 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK 278
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + +WD+ + + L GH AV V
Sbjct: 279 VIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASV---HTLSGHTNAVATV 335
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVV--SGSSDNTI 419
E I++ S D TI++W+ + + TL HK+ + + L SGS DN I
Sbjct: 336 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDN-I 394
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
+ W G ++ L GH ++ + +A + VSGA +G + +W+
Sbjct: 395 KQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWD 439
Score = 243 (90.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 60/205 (29%), Positives = 107/205 (52%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V++GH G V C+ + + ++GS+D T+++WD+ +G++ +L H V + S
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + +C +D+ + WD+ N++ R GH +AV +D +V+ S D T ++
Sbjct: 257 SPYLFSCGEDKQVKCWDL-EYNKVI--RHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V TL+GH +A + Q + +++GS D TIRLWD+ G L H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 373
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVW 462
VR + SG+ D IK W
Sbjct: 374 VRAVVLHPLLYTFASGSPDN-IKQW 397
Score = 214 (80.4 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 59/181 (32%), Positives = 86/181 (47%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S DST R+WDV T V+TL
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTL 325
Query: 311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H AV +R + ++T S D +I +WD+V+ R L H+ +V V
Sbjct: 326 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT---RVTLTNHKKSVRAVVLHPL 382
Query: 369 YIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
ASG IK W F++ L+GH I L D ++VSG+ + T+ LWD
Sbjct: 383 LYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDWRT 442
Query: 427 G 427
G
Sbjct: 443 G 443
Score = 203 (76.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 48/149 (32%), Positives = 77/149 (51%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V +V Y+ S D+ +K
Sbjct: 215 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKC 271
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L L +V+ S D+T R+WD+ A + L GH
Sbjct: 272 WDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 331
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVWNLVA 466
V +R A +I++G++D I++W+LVA
Sbjct: 332 VATVRCQAAEPQIITGSHDTTIRLWDLVA 360
Score = 143 (55.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTG 304
+V+ RD+T ++WD + + L+GHT +V + Q E II+GS D+T+R+WD+ G
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 361
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ TL +H ++V + + S +I W P+ ++ L GH A +N +
Sbjct: 362 KTRVTLTNHKKSVRAVVLHPLLYTFASGSPDNIKQWKF--PDGGFIQN-LSGHNAIINTL 418
Query: 364 DFD-EKYIVSASGDRTIKVWN 383
+ + +VS + + T+ +W+
Sbjct: 419 AVNADGVLVSGADNGTMHLWD 439
Score = 109 (43.4 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 40/157 (25%), Positives = 73/157 (46%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDS 294
V C Q + +I++G D TI++WD V+ + LT H SV + + SGS D+
Sbjct: 335 VRC-QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDN 393
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRV 352
++ W G + L H A+++ N G++V+ + + ++ +WD +
Sbjct: 394 -IKQWKFPDGGFIQNLSGH-NAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRVHA 451
Query: 353 LV-----GHRAAVNVVDFD--EKYIVSASGDRTIKVW 382
V + + FD E +++A D+TIKV+
Sbjct: 452 AVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 488
Score = 72 (30.4 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+ + R + S D ++ D
Sbjct: 216 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI-VSTRSPYLFSCGEDKQVKCWDL 274
Query: 173 EF-QIVSSSH 181
E+ +++ H
Sbjct: 275 EYNKVIRHYH 284
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 245 (91.3 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 65/251 (25%), Positives = 111/251 (44%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + + +G D ++W L H G + L+++ + I+
Sbjct: 279 SNKDVTSLDWNTNGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNRKGNYIL 337
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N M +CS D I V + +
Sbjct: 338 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRPV 397
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ + L H + I +++
Sbjct: 398 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKW 454
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWDIE G C L H+E V + F D + + S
Sbjct: 455 SPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLAS 514
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 515 GSFDKCVHIWN 525
Score = 145 (56.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 45/175 (25%), Positives = 81/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + ++ L H + + +++S
Sbjct: 397 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 456
Query: 324 ----------NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD + T L H+ V V F D +Y+
Sbjct: 457 TGPATSNPNSNIMLASASFDSTVRLWD-IERGVCT--HTLTKHQEPVYSVAFSPDGRYLA 513
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 514 SGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 567
Score = 136 (52.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 219 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 278
Query: 315 --EAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L ++ NG ++ T S D +W + L L H+ + + ++ K
Sbjct: 279 SNKDVTSLDWNTNGTLLATGSYDGFARIWT----EDGNLASTLGQHKGPIFALKWNRKGN 334
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ + S S+D I + + C
Sbjct: 335 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCD 394
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 395 RPVKTFQGHTNEVNAIKWD 413
Score = 131 (51.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 40/195 (20%), Positives = 84/195 (43%)
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVS 343
++ +GS D R+W G + +TL H + L+++ +++ D++ +WD
Sbjct: 294 LLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWD-AH 351
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
E ++ H A VD+ S S D I V V+T GH +
Sbjct: 352 TGEA--KQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNA 409
Query: 403 LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK-----------R 449
+++ L+ S S D T+++W ++ C+ L+ H + + I++
Sbjct: 410 IKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIM 469
Query: 450 IVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 470 LASASFDSTVRLWDI 484
Score = 47 (21.6 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 119 IVSASGDRTIKVWN 132
+ S SGD T ++WN
Sbjct: 239 LASGSGDSTARIWN 252
Score = 47 (21.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 281 KDVTSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNRK----GN- 334
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 335 -----Y-----ILSAGVDKTTIIWD 349
Score = 45 (20.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTI 168
YI+SA D+T +W+ + E + H + +++ + S S+D I
Sbjct: 335 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCI 386
Score = 38 (18.4 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 220 LRGHESEVFICAWNPVSDLLASGSGDSTAR 249
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 244 (91.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 67/235 (28%), Positives = 119/235 (50%)
Query: 252 RDNTIKVWDR-VS---LQCIKVLTGHT---GSVLCLQYDERVIISGSSDSTVRVWDV--N 302
+D +++VW VS + C+ TGH+ GS+ C + ++ ++SGS D TV+VWD+
Sbjct: 406 KDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPET 465
Query: 303 TG-EMVNTLIHHCEAVLHLRFSNGMMVTC--------SKDRSIAVWDMVSPNEITLRRVL 353
TG E V + H + N + V+ S+DR+ +W + +++ L V
Sbjct: 466 TGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWAL---SDLRLLGVC 522
Query: 354 VGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRL 409
GHR V V F ++ + SAS D ++++W+ ++T GH + + + R
Sbjct: 523 RGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQ 582
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
+VS SD ++LW I+ C+R L+ H++ V + + +V+G+ D I VW
Sbjct: 583 LVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 216 (81.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 62/229 (27%), Positives = 116/229 (50%)
Query: 217 WRMGKFLLQRINCRSE-----NSKG-VYCLQYDDHKIVSGLRDNTIKVWD------RVSL 264
WRM R++C ++ N+ G + C + +VSG +D T+KVWD +
Sbjct: 413 WRMD-VSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGV 471
Query: 265 QCIKVLT---GHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH 319
+K + H V +C+ +++++ SGS D T ++W ++ ++ H V
Sbjct: 472 MMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWS 531
Query: 320 LRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASG 375
++FS + ++ + S D S+ +W + + + + GH A+V + F + +VS+
Sbjct: 532 VQFSPVDQILGSASADGSVRIWSI---QDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGS 588
Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLW 422
D +K+W + E VRTL+ H+ + L RD L+V+GS+D+TI +W
Sbjct: 589 DGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 199 (75.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 54/182 (29%), Positives = 92/182 (50%)
Query: 300 DVNTGEM--VNTLIHHCEAVLHL---RFSNGMMVTCSKDRSIAVWDMVSPNE------IT 348
DV++G + V H AV + R +V+ S+D ++ VWD+ +
Sbjct: 416 DVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMK 475
Query: 349 LRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
R H VN V ++K + S S DRT K+W S + GH+RG+ +Q+
Sbjct: 476 ARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFS 535
Query: 407 --DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVW 462
D+++ S S+D ++R+W I+ +CL+ EGH+ V I F ++ ++VS DG +K+W
Sbjct: 536 PVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLW 595
Query: 463 NL 464
+
Sbjct: 596 TI 597
Score = 196 (74.1 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 59/221 (26%), Positives = 109/221 (49%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVN 302
++++ ++ I ++ +L + G+ VL +++ D+ I ++ S ++V++++
Sbjct: 316 RLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELS 375
Query: 303 TGEMVNTLIH-HCEAVLHLR-FSNG-MMVTCSKDRSIAVWDM-VSPNEITLRRVLVGHRA 358
T ++H H + +L + F G M TC+KD+S+ VW M VS + GH
Sbjct: 376 TNSC--QILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSN 433
Query: 359 AVNVVD---FDEKYIVSASGDRTIKVWN---TSSCEFVR------TLNGHKRGI--ACLQ 404
AV + ++++VS S D T+KVW+ T+ E V T H++ + C+
Sbjct: 434 AVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVS 493
Query: 405 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445
D+L+ SGS D T +LW + L V GH V ++F
Sbjct: 494 PNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQF 534
Score = 169 (64.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 54/191 (28%), Positives = 93/191 (48%)
Query: 226 RINCRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
R + R+ +S V + +D + +G D TIK+WD + C L G +G V +++
Sbjct: 98 RRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFH 157
Query: 284 ERV----IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIA 337
+ + S SSD +R+WD+ + V L H V L FS +G +V+ +D+ +
Sbjct: 158 PDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICS 217
Query: 338 VWDMVSPNEITLRRVLVGHRAAVNVV------DFDEK-------YIVSASGDRTIKVWNT 384
VWD+ E ++R + + A VV D+ E ++V+A ++VW++
Sbjct: 218 VWDL---QEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDS 274
Query: 385 SS--CEFVRTL 393
SS C F +TL
Sbjct: 275 SSSRCVFTQTL 285
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 296 VRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
+ + ++TG++++++ + L + M+V+ S+ + WD + R
Sbjct: 44 INILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDW--KQQQCRRSW 101
Query: 353 LVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---D 407
H V + FD + A+G D TIK+W+ L G + +++
Sbjct: 102 RAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDIS 161
Query: 408 RL-VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
RL + S SSD IR+WD+ C+ VLE H V + F D +VS D VW+L
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 56/236 (23%), Positives = 96/236 (40%)
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVL 278
GK ++ I + + L DD +VS R ++ WD QC + H+ V
Sbjct: 52 GK-IIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVA 110
Query: 279 CLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL-RF----SNGMMVTCS 331
+ +D ++ +G D T+++WDV + L V+HL F S + + S
Sbjct: 111 SMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNL-KGSSGVVHLVEFHPDISRLQLFSSS 169
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389
D +I +WD+ S + VL H + V + F D +VS+ D+ VW+ +
Sbjct: 170 SDCAIRIWDLRSSRCVC---VLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKV 226
Query: 390 VRTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
RT+ ++ G+ L G + + L LRV + RC+
Sbjct: 227 KRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSS--RCV 280
Score = 55 (24.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSS--CEFVRTL 142
D+ + D ++V+A ++VW++SS C F +TL
Sbjct: 247 DYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTL 285
Score = 55 (24.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 154
P+ + S+S D I++W+ S V L H + L +
Sbjct: 158 PDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAF 200
Score = 55 (24.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQY--RDRLVV 160
Q D + + D++ +VSAS ++ W+ + R+ H +A + + L+
Sbjct: 63 QEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLA 122
Query: 161 SGSSDNTIRYRD 172
+G D TI+ D
Sbjct: 123 TGGCDGTIKLWD 134
Score = 47 (21.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 16/77 (20%), Positives = 36/77 (46%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRYR-D 172
D +VS+ D+ VW+ + RT+ ++ +++SGS+D + + + D
Sbjct: 203 DGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEA------VEGVVLLSGSADYSEMGVKSD 256
Query: 173 EFQIVSSSHDDTILIWD 189
+V++ + +WD
Sbjct: 257 ALHLVTAGSKGVLRVWD 273
Score = 45 (20.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 20/79 (25%), Positives = 31/79 (39%)
Query: 113 NFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY 170
+FD + A+G D TIK+W+ L G + +++ +
Sbjct: 113 SFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDI------------ 160
Query: 171 RDEFQIVSSSHDDTILIWD 189
Q+ SSS D I IWD
Sbjct: 161 -SRLQLFSSSSDCAIRIWD 178
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 233 (87.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 29 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 87
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 88 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 147
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 148 E--SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 205
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + ++ + F R A G IK+W+L
Sbjct: 206 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDL 264
Score = 185 (70.2 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 77 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 136
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 137 T-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLKTNHI 192
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 193 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 252
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E +E++ +C D + + +G D +
Sbjct: 253 AATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 310
Query: 460 KVWNL 464
+VW +
Sbjct: 311 RVWQV 315
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 346 EITLRRVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEF-----VRTLNGHK 397
++TLR L GH V + ++ I+SAS D+TI +W + E R L GH
Sbjct: 7 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 66
Query: 398 RGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
++ + + +SGS D T+RLWD+ G R GH + V + F D ++IVSG
Sbjct: 67 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 126
Query: 454 AYDGKIKVWN 463
+ D IK+WN
Sbjct: 127 SRDKTIKLWN 136
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 24 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 82
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 83 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 141
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +S+ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 142 KYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 197
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 198 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATG 256
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 257 PSIKIWDL 264
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDER----VIISGSSDSTVR 297
D+ +IVSG RD TIK+W+ + + V H+ V C+++ +I+S D V+
Sbjct: 119 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 178
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
VW++ ++ I H + + S + + KD +WD+ NE L G
Sbjct: 179 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLDG 235
Query: 356 HRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-------CLQYR- 406
+N + F +Y + A+ +IK+W+ V L + C
Sbjct: 236 GDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 294
Query: 407 --D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN +R+W + G
Sbjct: 295 SADGQTLFAGYTDNLVRVWQVTIG 318
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 224 (83.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 59/240 (24%), Positives = 120/240 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D+ ++S ++ +K+W+R +LQCI+ + LC + +R ++ G+ ++++D
Sbjct: 425 DNIAVLSAAAES-VKIWNRSTLQCIRTMPCEYA--LCSFFVPGDRQVVIGTKTGNMQLYD 481
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWD--MVSPNEITLRRVLVGH 356
+ +G ++ T+ H A+ + S VT D+++ WD +V+ T +R+ V
Sbjct: 482 LASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSV-K 540
Query: 357 RAAVNVVDFDEKYIVSASGDR---------TIKVWNTSSCEFVRTLNGHKRGIACLQ--Y 405
+ + +D D Y+ + R T+K++ + +F +L GHK + C+ +
Sbjct: 541 QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH 600
Query: 406 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWN 463
L+ +GS+D +++W ++ G C R L H++ V +RF K + D KIK W+
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD 660
Score = 203 (76.5 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 69/284 (24%), Positives = 127/284 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D ++SA+ + ++K+WN S+ + +RT+ + DR VV G+ ++ D
Sbjct: 425 DNIAVLSAAAE-SVKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLYD-- 481
Query: 175 QIVSSSHDDTILIWD--FLNYSETPIQXXXXXXXXXXXXXI-------ENNWRMGKFLLQ 225
+ S + +TI D + S +P Q + N + ++
Sbjct: 482 -LASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVK 540
Query: 226 RINCRSENSKGVY-CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--Y 282
+ + +Y C D + L D T+K++ +L+ L GH V+C+ +
Sbjct: 541 QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH 600
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
D +I +GS+D V++W ++ G+ +L H ++V+HLRF + + T KD I WD
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 341 MVSPNEITLRRVLVGHRAAV--NVVDFDEKYIVSASGDRTIKVW 382
I + L GH + V Y+VSAS D+++++W
Sbjct: 661 ADKFEHI---QTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 185 (70.2 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 56/237 (23%), Positives = 108/237 (45%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDV 301
D ++V G + ++++D S ++ + H G++ + L D+R ++G +D V+ WD
Sbjct: 465 DRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDF 524
Query: 302 NTGEMVNTLIHHCEA--VLHLRFSNGMMVTC-SKD-RSIAVWDMVSPNEI----TLRRVL 353
N+ L+ ++ C S D R +AV + +I TL+ L
Sbjct: 525 ELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFL 584
Query: 354 --VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RD 407
GH+ V +D D I + S DR +K+W + R+L H + L++ +
Sbjct: 585 SLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKS 644
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW 462
L + D+ I+ WD + ++ LEGH + + C+ +VS ++D +++W
Sbjct: 645 HLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 185 (70.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 258 VWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+WD + I +L G V CL D + G D +RV+ + +GE T H
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRA 108
Query: 316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
AV L++ G + + SKD + +WD++ NE L R L GH+ AV F + +V
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDVIIWDVI--NESGLYR-LKGHKDAVTQALFLRERNLLV 165
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
++ D +K W+ + +T+ GH+ G+ + RL+ +G++D+ +R WDI A
Sbjct: 166 TSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLI-TGAADSELRAWDI---A 221
Query: 429 CLRVLEGHEE 438
L+ ++ EE
Sbjct: 222 YLQEIDDPEE 231
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/191 (27%), Positives = 94/191 (49%)
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVS-PNEITLRRV 352
V +WD+ GE + L + V L S +G+ + +D +I V+ ++S IT
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFN-- 104
Query: 353 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR- 408
GHRAAV + +D+ + S S D + +W+ + + L GHK + L R+R
Sbjct: 105 --GHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERN 162
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVWNLVA 466
L+V+ D ++ WD++ C + + GH V + + R+++GA D +++ W+ +A
Sbjct: 163 LLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWD-IA 221
Query: 467 AL----DPRAP 473
L DP P
Sbjct: 222 YLQEIDDPEEP 232
Score = 162 (62.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 61/221 (27%), Positives = 102/221 (46%)
Query: 240 LQYDDHKIVSGLRDNTIKVWD------------RVSLQCIKVLTGHTGSV-LCLQYDERV 286
L D V+G D +K WD R+S++ ++L + +C D+R+
Sbjct: 503 LSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRL 562
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSP 344
+ D TV+++ V+T + +L H V+ + S+ ++ T S DR++ +W +
Sbjct: 563 LAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFG 622
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIAC 402
+ R L H +V + F K ++ +G D IK W+ E ++TL GH + I C
Sbjct: 623 D---CHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWC 679
Query: 403 LQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441
L VVS S D ++RLW+ L +LE EL R
Sbjct: 680 LAVSPSGDYVVSASHDKSLRLWE-RTREPL-ILEEERELQR 718
Score = 149 (57.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTV 296
C D + G D I+V+ +S + GH +V L+YD+ + SGS D+ V
Sbjct: 72 CPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGGRLASGSKDTDV 131
Query: 297 RVWDVNTGEMVNTLIHHCEAV---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
+WDV + L H +AV L LR N ++VT KD + WD+ N+ + +
Sbjct: 132 IIWDVINESGLYRLKGHKDAVTQALFLRERN-LLVTSGKDTMVKWWDL--DNQHCFK-TM 187
Query: 354 VGHRAAV--NVVDFDEKYIVSASGDRTIKVWN 383
VGHR V V+ +E +++ + D ++ W+
Sbjct: 188 VGHRTEVWGLVLVSEETRLITGAADSELRAWD 219
Score = 145 (56.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 46/197 (23%), Positives = 88/197 (44%)
Query: 293 DSTVRVWDVNTGEMVNT--LIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT 348
D +RV + T + + LIH + L F N ++ S S+ +P +
Sbjct: 350 DEILRVTKIKTSAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLSTSLP-----NPQPVR 404
Query: 349 LRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
R+ +G HR+ V + F D ++SA+ + ++K+WN S+ + +RT+ +
Sbjct: 405 TSRITIGGHRSDVRTLSFSSDNIAVLSAAAE-SVKIWNRSTLQCIRTMPCEYALCSFFVP 463
Query: 406 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
DR VV G+ ++L+D+ G L + H+ + + D + V+G D +K W+
Sbjct: 464 GDRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWD 523
Query: 464 LVAALDPRAPTTTLCLR 480
D + L ++
Sbjct: 524 FELVTDKNSTQKRLSVK 540
Score = 115 (45.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 48/212 (22%), Positives = 94/212 (44%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327
GH V L + D ++S +++S V++W+ +T + + T+ CE L F G +
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAAES-VKIWNRSTLQCIRTM--PCEYALCSFFVPGDRQV 468
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN---- 383
V +K ++ ++D+ S N + G ++++ D++ V+ D+ +K W+
Sbjct: 469 VIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSP-DQRGFVTGGADKAVKFWDFELV 527
Query: 384 TSSCEFVRTLNGHKRGI---------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
T + L+ + I C RL+ D T++++ ++ L
Sbjct: 528 TDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLY 587
Query: 435 GHEELVRC--IRFDAKRIVSGAYDGKIKVWNL 464
GH+ V C I D I +G+ D +K+W L
Sbjct: 588 GHKLPVICMDISHDGALIATGSADRNVKIWGL 619
Score = 103 (41.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDV 301
+ SG +D +K WD + C K + GH V L L +E +I+G++DS +R WD+
Sbjct: 165 VTSG-KDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Score = 77 (32.2 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 162
L+++ L P+ D ++ D I+V++ S E T NGH+ + L+Y D+L G
Sbjct: 64 LKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKY-DQL---G 119
Query: 163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194
++ S S D ++IWD +N S
Sbjct: 120 G-----------RLASGSKDTDVIIWDVINES 140
Score = 61 (26.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 116 EKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYR 171
E+ ++ SG D +K W+ + +T+ GH+ G+ + RL+ +G++D+ +R
Sbjct: 160 ERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLI-TGAADSELRAW 218
Query: 172 D 172
D
Sbjct: 219 D 219
Score = 60 (26.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDR-LVVSGSSDNTIRYRD 172
+ S S D + +W+ + + L GHK + L R+R L+V+ D +++ D
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWD 177
Score = 42 (19.8 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 130 VWNTSSCEFVRTLNGHKRGIACL-QYRDRLVVS-GSSDNTIR 169
+W+ E + L G K+ + CL D L ++ G D IR
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIR 90
>RGD|1307881 [details] [associations]
symbol:Rrp9 "ribosomal RNA processing 9, small subunit (SSU)
processome component, homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307881 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH473954
GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732 KO:K14793
CTD:9136 HOVERGEN:HBG079296 OrthoDB:EOG4XKV6X EMBL:BC158778
IPI:IPI00869600 RefSeq:NP_001102248.1 UniGene:Rn.11840
STRING:B0BND5 Ensembl:ENSRNOT00000017469 GeneID:363134
KEGG:rno:363134 NextBio:682561 Genevestigator:B0BND5 Uniprot:B0BND5
Length = 478
Score = 247 (92.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 70/218 (32%), Positives = 105/218 (48%)
Query: 267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH-----------H 313
I+VL GH S+ CL D+ I S + D T+ W V TG ++ + H
Sbjct: 142 IRVLRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKGTQGQPSGH 201
Query: 314 CEAVLHLRFSNGMMVTCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KY 369
+L + S+ S DRS I +W+ S + GHR AV+ + F
Sbjct: 202 SSHILCMAISSDGKYLASGDRSKLILIWEAQSCQHLY---TFTGHRDAVSGLAFRRGTHQ 258
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 427
+ S S DR++KVWN + +V TL GH+ +A L R+ V +G D T+R+W I
Sbjct: 259 LYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEE 318
Query: 428 ACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNL 464
+ L V GH+ + CI + + +VSGA DG + +W L
Sbjct: 319 SQL-VFYGHQGSIDCIHLINEEHMVSGADDGSVALWGL 355
Score = 182 (69.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 65/225 (28%), Positives = 103/225 (45%)
Query: 231 SENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERV 286
S +S + C+ D K + SG R I +W+ S Q + TGH +V L +
Sbjct: 199 SGHSSHILCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQ 258
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL-RFSNGMMVTCS-KDRSIAVWDMVSP 344
+ S S D +V+VW+ V TL H +AV L S VT +D ++ VW + P
Sbjct: 259 LYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKI--P 316
Query: 345 NEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSS---CEFVRTLNG-HKR- 398
E L V GH+ +++ + +E+++VS + D ++ +W S R +G H
Sbjct: 317 EESQL--VFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGEP 374
Query: 399 ---------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
+A L D LV +GS + +RLW +CG R L+
Sbjct: 375 GLEQPFWISSVAALLNTD-LVATGSHNACVRLW--QCGEGFRQLD 416
Score = 49 (22.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 139 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 168
+R L GH+ I CL D + S + D TI
Sbjct: 142 IRVLRGHQLSITCLVITPDDLAIFSAAKDCTI 173
Score = 38 (18.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 148
D+ I SA+ D TI W+ + + + K+G
Sbjct: 160 DDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKG 193
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 241 (89.9 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 69/254 (27%), Positives = 115/254 (45%)
Query: 231 SENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--V 286
+E SK V L ++ + +G D ++W ++ + I L+ H G + L+++++
Sbjct: 321 NEKSKDVTTLDWNGEGTLLATGSCDGQARIWT-LNGELISTLSKHKGPIFSLKWNKKGDY 379
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPN 345
+++GS D T VWDV E H L + + N + T S D I + +
Sbjct: 380 LLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKI---G 436
Query: 346 EITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
E + GH+ VN V +D + S S D T K+WN FV L H + I +
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 404 QY-----------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI 450
++ + + S S D+T++LWD E G L GH E V + F + + I
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYI 556
Query: 451 VSGAYDGKIKVWNL 464
SG+ D I +W++
Sbjct: 557 ASGSLDKSIHIWSI 570
Score = 148 (57.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 45/173 (26%), Positives = 80/173 (46%)
Query: 268 KVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
K TGH G V C+++D ++ S S DST ++W++ V+ L H + + +R+S
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPT 501
Query: 324 ----NG-----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVS 372
N + + S D ++ +WD + GHR V + F +YI S
Sbjct: 502 GPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFN---GHREPVYSLAFSPNGEYIAS 558
Query: 373 ASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWD 423
S D++I +W+ + V+T G+ GI C + + +DN++ + D
Sbjct: 559 GSLDKSIHIWSIKEGKIVKTYTGNG-GIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 144 (55.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 52/255 (20%), Positives = 112/255 (43%)
Query: 227 INCRSENSKGVYCLQYD---DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
I+ S++ ++ L+++ D+ +++G D T VWD + + + H+G L + +
Sbjct: 358 ISTLSKHKGPIFSLKWNKKGDY-LLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR 416
Query: 284 ERVIISGSS-DSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWD 340
V + SS DS + + + T H V +++ + ++ +CS D + +W+
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFD-----------EKYIVSASGDRTIKVWNTSSCEF 389
+ + T L H + + + + + SAS D T+K+W+ +
Sbjct: 477 I---KQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM 533
Query: 390 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFD 446
+ + NGH+ + L + + SGS D +I +W I+ G ++ G+ + C +
Sbjct: 534 LCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKE 593
Query: 447 AKRIVSGAYDGKIKV 461
+I + D + V
Sbjct: 594 GNKIAACFADNSVCV 608
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTG 304
+ S D+T+K+WD + + GH V L + I SGS D ++ +W + G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 305 EMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
++V T + + + ++ + C D S+ V D
Sbjct: 574 KIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178
+ S S D T K+WN FV L H + I +++ S + T + + S
Sbjct: 463 LASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRW------SPTGPGTNNPNKQLTLAS 516
Query: 179 SSHDDTILIWD 189
+S D T+ +WD
Sbjct: 517 ASFDSTVKLWD 527
Score = 59 (25.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 168
SL N Y+++ S DRT VW+ + E+ + H + +R+ + + SS +++
Sbjct: 370 SLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSM 429
Query: 169 RY 170
Y
Sbjct: 430 IY 431
Score = 52 (23.4 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 17/72 (23%), Positives = 29/72 (40%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRYRDEFQIV 177
+ S SGD T ++W+ F G L++ S D T+ + E ++
Sbjct: 280 LASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLL 339
Query: 178 SS-SHDDTILIW 188
++ S D IW
Sbjct: 340 ATGSCDGQARIW 351
Score = 47 (21.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D +L N + + + S D ++W T + E + TL+ HK I L++ + G
Sbjct: 325 KDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKK----GD- 378
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y +++ S D T ++WD
Sbjct: 379 -----Y-----LLTGSVDRTAVVWD 393
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 227 (85.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 255 TIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIH 312
TIK+WD +CI+ + GH +V + + + I+S S D T+++W+V TG V T
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 313 HCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI 370
H E V +R + +G ++ +CS D+++ VW +V+ E + L H V + + +
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKEC--KAELREHEHVVECISWAPESS 118
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 430
S+ + T +VR + H G + ++S + D T+R+WD + C+
Sbjct: 119 YSSISEATGS--EVGHDNWVRGVLFHSGG--------KFILSCADDKTLRVWDYKNKRCM 168
Query: 431 RVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
+ L HE V + F A +V+G+ D +KVW
Sbjct: 169 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 69/217 (31%), Positives = 105/217 (48%)
Query: 217 WRMGKF-LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275
W F ++ ++ N V + DH IVS RD TIK+W+ + C+K TGH
Sbjct: 6 WDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHRE 64
Query: 276 SVLCLQ--YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKD 333
V ++ D +I S S+D TVRVW V T E C+A L + +V C
Sbjct: 65 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKE--------CKAELR---EHEHVVECISW 113
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVR 391
+ + +S E T V GH V V F K+I+S + D+T++VW+ + ++
Sbjct: 114 APESSYSSIS--EATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 169
Query: 392 TLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 426
TLN H+ + L + VV+GS D T+++W EC
Sbjct: 170 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW--EC 204
Score = 160 (61.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YRD-RLVVSGSSD 165
++++PN D +IVSAS D+TIK+W + V+T GH+ + ++ +D L+ S S+D
Sbjct: 27 VAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 84
Query: 166 NTIRY----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
T+R E + H+ + + ++++ P +NW G
Sbjct: 85 QTVRVWVVATKECKAELREHEHVV---ECISWA--PESSYSSISEATGSEVGHDNWVRGV 139
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
+S G + L D D T++VWD + +C+K L H V L
Sbjct: 140 LF---------HSGGKFILSCAD--------DKTLRVWDYKNKRCMKTLNAHEHFVTSLD 182
Query: 282 YDERV--IISGSSDSTVRVWD 300
+ + +++GS D TV+VW+
Sbjct: 183 FHKTAPYVVTGSVDQTVKVWE 203
Score = 159 (61.0 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 378 TIKVWNTSSCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
TIK+W+ E +RT++GH + A + D +VS S D TI++W+++ G C++
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVKTFT 60
Query: 435 GHEELVRCIR--FDAKRIVSGAYDGKIKVWNLVAALDPRA 472
GH E VR +R D I S + D ++VW +VA + +A
Sbjct: 61 GHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKA 99
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 211 (79.3 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 69/247 (27%), Positives = 118/247 (47%)
Query: 237 VYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD 293
V C+Q V G + +++KV + ++ + + T H +V +Q+ D + +IS S D
Sbjct: 710 VSCIQGTSECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDD 769
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
S ++VW+ + E V+ H E V R N +++ S D ++ VW++++ + +
Sbjct: 770 SAIQVWNWQSEETVSLQAHQ-ETVKDFRLLKNSRLLSWSFDGTVKVWNIITGR---IEKD 825
Query: 353 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR 408
V H+ V D D S S D+T K+W+ + L GHK + C +
Sbjct: 826 FVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDST 885
Query: 409 LVVSGSSDNTIRLWDIECG----ACLRVL-EG----HEELVRCIRF--DAKRIVSGAYDG 457
L+ +G + IR+W++ G +C VL EG H V +RF D K +VS G
Sbjct: 886 LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAG--G 943
Query: 458 KIKVWNL 464
+K WN+
Sbjct: 944 YLKWWNV 950
Score = 196 (74.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 53/181 (29%), Positives = 90/181 (49%)
Query: 224 LQRINCRSENSKGVY--CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
L R+ R ++ VY C D +I S D T++V+ + + + + H VLC
Sbjct: 342 LSRLVVRP-HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 400
Query: 282 Y--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRS 335
+ D+R I + S D V++W+ TGE+V + H E V F+N ++ T S D
Sbjct: 401 FSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYF 460
Query: 336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL 393
+ +WD+ N+ R + GH +V+ F D+K + S S D T+K+W+ S +++
Sbjct: 461 LKLWDL---NQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSI 517
Query: 394 N 394
N
Sbjct: 518 N 518
Score = 191 (72.3 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 48/165 (29%), Positives = 85/165 (51%)
Query: 313 HCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK 368
H +AV H FS +G + +C D+++ V+ E L + H V F D++
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFK-AETGEKLLE--IKAHEDEVLCCAFSADDR 406
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRLWDI 424
+I + S D+ +K+WN+ + E V++ + H + C + + L+ +GSSD ++LWD+
Sbjct: 407 FIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDL 466
Query: 425 ECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467
C + GH V RF D K + S + DG +K+W++ +A
Sbjct: 467 NQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSA 511
Score = 110 (43.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 29/122 (23%), Positives = 61/122 (50%)
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 424
E +++ ++KV + ++ HK + +Q+ + V+S S D+ I++W+
Sbjct: 718 ECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNW 777
Query: 425 ECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
+ + L+ H+E V+ R R++S ++DG +KVWN++ R +C + V
Sbjct: 778 QSEETVS-LQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITG---RIEKDFVCHQDTV 833
Query: 484 VS 485
+S
Sbjct: 834 LS 835
Score = 91 (37.1 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 17/62 (27%), Positives = 36/62 (58%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRY 170
D+++I + S D+ +K+WN+ + E V++ + H + C + + L+ +GSSD ++
Sbjct: 404 DDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKL 463
Query: 171 RD 172
D
Sbjct: 464 WD 465
Score = 77 (32.2 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRY 170
N + + + S D +K+W+ + E T+ GH ++ ++ D+L+ S S+D T++
Sbjct: 446 NSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKL 505
Query: 171 RDEFQIVSSSHDDTILIWDF-LNYSET 196
D + S++ +I + F LN E+
Sbjct: 506 WD---VKSANERKSINVKQFFLNSEES 529
Score = 53 (23.7 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 216 NW--RMG--KFLLQRINCRSENSKGVYCLQYDD-HK 246
NW R G KFL QR+NC S+ + + D HK
Sbjct: 159 NWSSRHGGXKFLAQRLNCCSDTTGSNVSFGFQDLHK 194
>DICTYBASE|DDB_G0283265 [details] [associations]
symbol:mkkA "octicosapeptide/Phox/Bem1p
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0005938
"cell cortex" evidence=IDA] [GO:0004709 "MAP kinase kinase kinase
activity" evidence=IEA;ISS] [GO:0000186 "activation of MAPKK
activity" evidence=IEA;ISS] [GO:0000165 "MAPK cascade"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] GenBank:AAFI02000052
Ncbi:EAL65773
Length = 1267
Score = 263 (97.6 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 79/330 (23%), Positives = 142/330 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNG------HKRGIACLQYRDRLVVSGSSDNTI 168
D+ ++S D+ +KVW+ S +G K G+ + + S SS N+
Sbjct: 945 DQGMVLSGGEDKKLKVWDISGNHHHNHHSGIVGSISKKSGLNIIN-NNNSNNSNSSSNSS 1003
Query: 169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRIN 228
+ H I D+ S + + + + K L N
Sbjct: 1004 SSNSRYLFSLKGHSGCIKSVDYQRQSGSDVSRVFTASADFTCKIF--SLKTKKTLFTYTN 1061
Query: 229 CRSENSKGVYCLQY--D-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE- 284
+ + V C+ Y D ++K ++ D TI++WD + C+ L GHTG + C++ D+
Sbjct: 1062 ----HQEAVTCINYLGDVENKCITSSLDKTIQLWDAETGSCLSTLRGHTGGIYCVKTDQV 1117
Query: 285 --------RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI 336
+++S S D T VWD + V + H E VL + +VT S D +I
Sbjct: 1118 ATHGNGYNHLVVSASVDKTSNVWDTRSSSKVRSFTQHTEDVLCCYVFDQKVVTGSCDGTI 1177
Query: 337 AVWDMVSPNEI-TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG 395
+WD+ + I T + V V FD+ I+S+ I++W+ + R++ G
Sbjct: 1178 KLWDIGTGKTISTFIPSETRQKNYVWTVQFDQSKIISSGKTGIIRIWDIYNERDSRSIGG 1237
Query: 396 HKRGIACLQYRDRLVVSGSSDNTIRLWDIE 425
H I LQ+ ++ +++GS D +++W I+
Sbjct: 1238 HHETIFSLQFNNQKLITGSLDKLVKIWSID 1267
Score = 253 (94.1 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 100/413 (24%), Positives = 179/413 (43%)
Query: 78 DFVENLLSRMC-HYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIK---VWNT 133
+FV N LSR+C H++ + L D + F+E ++ + K VW
Sbjct: 864 NFV-NTLSRVCKHWKQIIDDDELWNKYCSDRLINKSKFEESITWKSNYIKIYKQQKVWFH 922
Query: 134 SSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFL 191
+ TL GH +G+ C++ D +V+SG D ++ D +S +H
Sbjct: 923 NKLNH-STLKGHDKGVFCVKLIDDQGMVLSGGEDKKLKVWD----ISGNHHHNHHSGIVG 977
Query: 192 NYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGV-YCLQY--DDHKIV 248
+ S+ N+ L + S K V Y Q D ++
Sbjct: 978 SISKKSGLNIINNNNSNNSNSSSNSSSSNSRYLFSLKGHSGCIKSVDYQRQSGSDVSRVF 1037
Query: 249 SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--D-ERVIISGSSDSTVRVWDVNTGE 305
+ D T K++ + + + T H +V C+ Y D E I+ S D T+++WD TG
Sbjct: 1038 TASADFTCKIFSLKTKKTLFTYTNHQEAVTCINYLGDVENKCITSSLDKTIQLWDAETGS 1097
Query: 306 MVNTLIHH-----C----EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
++TL H C + H N ++V+ S D++ VWD S +++ R H
Sbjct: 1098 CLSTLRGHTGGIYCVKTDQVATHGNGYNHLVVSASVDKTSNVWDTRSSSKV---RSFTQH 1154
Query: 357 RAAVNVVD-FDEKYIVSASGDRTIKVWNTSSCEFVRTL----NGHKRGIACLQYRDRLVV 411
V FD+K +V+ S D TIK+W+ + + + T K + +Q+ ++
Sbjct: 1155 TEDVLCCYVFDQK-VVTGSCDGTIKLWDIGTGKTISTFIPSETRQKNYVWTVQFDQSKII 1213
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
S IR+WDI R + GH E + ++F+ +++++G+ D +K+W++
Sbjct: 1214 SSGKTGIIRIWDIYNERDSRSIGGHHETIFSLQFNNQKLITGSLDKLVKIWSI 1266
Score = 235 (87.8 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 65/225 (28%), Positives = 109/225 (48%)
Query: 270 LTGHTGSVLCLQY------DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
L GH+G + + Y D + + S+D T +++ + T + + T +H EAV + +
Sbjct: 1013 LKGHSGCIKSVDYQRQSGSDVSRVFTASADFTCKIFSLKTKKTLFTYTNHQEAVTCINYL 1072
Query: 324 NGM---MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK------Y---IV 371
+ +T S D++I +WD + + ++ R GH + V D+ Y +V
Sbjct: 1073 GDVENKCITSSLDKTIQLWDAETGSCLSTLR---GHTGGIYCVKTDQVATHGNGYNHLVV 1129
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
SAS D+T VW+T S VR+ H + C D+ VV+GS D TI+LWDI G +
Sbjct: 1130 SASVDKTSNVWDTRSSSKVRSFTQHTEDVLCCYVFDQKVVTGSCDGTIKLWDIGTGKTIS 1189
Query: 432 VLEGHE----ELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRA 472
E V ++FD +I+S G I++W++ D R+
Sbjct: 1190 TFIPSETRQKNYVWTVQFDQSKIISSGKTGIIRIWDIYNERDSRS 1234
Score = 175 (66.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 52/208 (25%), Positives = 98/208 (47%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 167
I+ L + + K I S S D+TI++W+ + + TL GH GI C++ D++ G+ N
Sbjct: 1069 INYLGDVENKCITS-SLDKTIQLWDAETGSCLSTLRGHTGGIYCVK-TDQVATHGNGYNH 1126
Query: 168 IRYRDEFQIVSSSHDDTILIWD---------FLNYSETPI--QXXXXXXXXXXXXXIENN 216
+ +VS+S D T +WD F ++E +
Sbjct: 1127 L-------VVSASVDKTSNVWDTRSSSKVRSFTQHTEDVLCCYVFDQKVVTGSCDGTIKL 1179
Query: 217 WRMG--KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
W +G K + I + V+ +Q+D KI+S + I++WD + + + + GH
Sbjct: 1180 WDIGTGKTISTFIPSETRQKNYVWTVQFDQSKIISSGKTGIIRIWDIYNERDSRSIGGHH 1239
Query: 275 GSVLCLQYDERVIISGSSDSTVRVWDVN 302
++ LQ++ + +I+GS D V++W ++
Sbjct: 1240 ETIFSLQFNNQKLITGSLDKLVKIWSID 1267
Score = 37 (18.1 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 7 PNRKKEPAPQFASEKEMCPYL 27
P R P+P +S K P+L
Sbjct: 172 PLRTPPPSPPSSSPKNSPPFL 192
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 243 (90.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 63/217 (29%), Positives = 107/217 (49%)
Query: 268 KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
K L GH+G+V + D + ++SGS D TVR+W ++T + + H V + FS
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKV 381
T S D++ +W S + I R+ GH V+ V F Y+ + S D+T ++
Sbjct: 579 GHYFATASHDQTARLW---SCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRM 635
Query: 382 WNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH-EE 438
W+ S+ + VR GH + + R + +GS D I +WDI G L+ + GH +
Sbjct: 636 WDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN 695
Query: 439 LVRCIRF--DAKRIVSGAYDGKIKVWNLV-AALDPRA 472
+ + + + ++SG D ++VW+L A +P A
Sbjct: 696 AIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSA 732
Score = 188 (71.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 53/204 (25%), Positives = 99/204 (48%)
Query: 233 NSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVII 288
+S VY + D+K ++SG D T+++W + + GH V + +
Sbjct: 524 HSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFA 583
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNE 346
+ S D T R+W + + H V + F NG V T S D++ +WD+ + +
Sbjct: 584 TASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDS 643
Query: 347 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH-KRGIACL 403
+ R+ +GH A V + D +++ + S D I VW+ + + ++ + GH K I L
Sbjct: 644 V---RLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSL 700
Query: 404 QY--RDRLVVSGSSDNTIRLWDIE 425
Y +++SG +D+T+R+WD++
Sbjct: 701 SYSKEGNVLISGGADHTVRVWDLK 724
Score = 53 (23.7 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 234 SKGVYCLQY-DDHKIVS-GLRDNTIKVW 259
+K + CL + DD +I + G +D+ IK+W
Sbjct: 466 NKDMSCLDFSDDCRIAAAGFQDSYIKIW 493
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 248 (92.4 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 65/211 (30%), Positives = 112/211 (53%)
Query: 273 HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE--AVLHLR---FS-N 324
H V C+ + D + + +G + S +++DV+TG+ V+ + E L++R FS +
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 325 G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV 381
G + T ++D+++ VWD+ + ++ GH + +D+ D ++IVS SGD+ K+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKK---IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 382 WNTSSCEFVRTLN----GHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEG 435
W+ + TL G K G+ + RLV +GS DN +RLWD + G L EG
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 436 HEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
H + V + F D K + SG+ D +K+W+L
Sbjct: 456 HLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Score = 231 (86.4 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 70/245 (28%), Positives = 113/245 (46%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTV 296
C D + + +G D T+KVWD + + GH + L Y D R I+SGS D
Sbjct: 334 CFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 297 RVWDVNTGEMVNTL----IHHCEAVLHLRFS-NGMMVTC-SKDRSIAVWDMVSPNEITLR 350
++WD+ G+ TL + V + S +G +V S D + +WD + L
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD--AQTGYFLE 451
Query: 351 RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS---SCEFVR-TLNGHKRGIACLQ 404
R GH +V V F D K + S S D+++K+W+ S S R T NGHK + +
Sbjct: 452 RY-EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVA 510
Query: 405 YRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-----IVSGAYDG 457
+ ++SGS D +++ WD G +L+GH+ V + K +G+ D
Sbjct: 511 FSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDF 570
Query: 458 KIKVW 462
+ ++W
Sbjct: 571 RSRLW 575
Score = 212 (79.7 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 55/216 (25%), Positives = 102/216 (47%)
Query: 278 LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRS 335
+C D + +G+ D TV+VWD++T ++ +T H + L +S+ +V+ S D+
Sbjct: 333 VCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKK 392
Query: 336 IAVWDMVSPN-EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392
+WD+ TL VG + V V D + + + S D +++W+ + F+
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLER 452
Query: 393 LNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF- 445
GH + + + + + SGS D +++LWD+ C GH++ V + F
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 446 -DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
D ++SG+ D ++ W DPR TT + L+
Sbjct: 513 PDGSWLISGSKDRSVQFW------DPRNGTTHMMLQ 542
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 248 (92.4 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 58/210 (27%), Positives = 103/210 (49%)
Query: 267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH--HCEAVLHLRF 322
+KVL GH G V ++ D ++S S D ++R WD+ G NT+++ H V L
Sbjct: 331 MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDI 388
Query: 323 SNGMM--VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT 378
S + + S DR+ +W + R+ GH A V+ V F + Y+ + S D+T
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPL---RIYAGHLADVDCVKFHPNSNYLATGSTDKT 445
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
+++W+T VR GH+ + L + + + S D ++LWD+ G + L GH
Sbjct: 446 VRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 505
Query: 437 EELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
+ + + F D+ + S + D ++VW++
Sbjct: 506 TDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Score = 213 (80.0 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 300 DVNTGEMVNTLIHHCEAVLHLRF---SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH 356
D N G + L HC V RF S+G++ +CS+D SI WD+ S L + GH
Sbjct: 324 DDNLGTEMKVLRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGSFTNTVLYQ---GH 379
Query: 357 RAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVS 412
V +D Y SAS DRT ++W+ +R GH + C+++ + +
Sbjct: 380 AYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 439
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
GS+D T+RLW + G +R+ GH V + F + K + S D ++K+W+L +
Sbjct: 440 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Score = 210 (79.0 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/215 (28%), Positives = 96/215 (44%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVII--SGSS 292
VY ++ D ++S D +I+ WD S + GH V L + S S
Sbjct: 341 VYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASH 400
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
D T R+W + + H V ++F ++ + T S D+++ +W N +
Sbjct: 401 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSV--- 457
Query: 351 RVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-- 406
R+ GHR V + F KY+ SA D+ +K+W+ +S + L GH I L +
Sbjct: 458 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 517
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELV 440
LV S S DN++R+WDI C +G ELV
Sbjct: 518 SSLVASASMDNSVRVWDIRSSHCSTPADGSSSELV 552
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 46/190 (24%), Positives = 84/190 (44%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV-LHLRFSNGMMVTCSKDRSIAVWDM 341
D +++ +G +S +++W + + ++ + H + +HL C + D
Sbjct: 275 DSKLLAAGFDNSCIKLWSLRSKKLKSEP-HQVDVSRIHL--------ACD---FLEEEDD 322
Query: 342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL--NGHK 397
N T +VL GH V F D ++S S D +I+ W+ S F T+ GH
Sbjct: 323 EDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS--FTNTVLYQGHA 380
Query: 398 RGIACLQYRDRLV--VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ L + S S D T RLW + LR+ GH V C++F ++ + +G
Sbjct: 381 YPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 440
Query: 454 AYDGKIKVWN 463
+ D +++W+
Sbjct: 441 STDKTVRLWS 450
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 249 (92.7 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 71/249 (28%), Positives = 119/249 (47%)
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
LQ I S N + + + +G D + VW L+ +LTGHT + LQ
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRH-DLLTGHTTPIESLQIS 71
Query: 284 --ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTC-SKDRSIAVW 339
E +I++GS ++RVWD+ +++ TL+ H + L F G V S D I +W
Sbjct: 72 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 131
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D+ I + H AV + F D K++ SA+ D T+K+W+ ++ + + GH
Sbjct: 132 DVRRKGCIFKYK---SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 188
Query: 398 RGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSG 453
+ +++ + L+ SGSS TIR WD+E + +E VRCI F+ + G
Sbjct: 189 GPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYG 248
Query: 454 AYDGKIKVW 462
+ ++V+
Sbjct: 249 GFQDSLRVY 257
Score = 210 (79.0 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 56/174 (32%), Positives = 85/174 (48%)
Query: 303 TGEMVNTLIHHCEAV--LHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRR-VLVGHRA 358
T + ++ H V L L S G ++ T D + VW + LR +L GH
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQ-----LRHDLLTGHTT 63
Query: 359 AVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGS 414
+ + E+ IV+ S +I+VW+ + + +RTL GHK I L + V SGS
Sbjct: 64 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGS 123
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
D I+LWD+ C+ + H + VRC+RF D K + S A D +K+W+L A
Sbjct: 124 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 177
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 248 (92.4 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 64/220 (29%), Positives = 107/220 (48%)
Query: 267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH--HCEAVLHLRF 322
IK L GH+G V + D ++S S DSTVR WD+ + NT+++ H V +
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS--FTNTVLYRGHAYPVWDVDV 404
Query: 323 SNGMMV--TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT 378
S + T S DR+ +W + R+ GH + V+ V F + YI + S D+T
Sbjct: 405 SPCSLYFSTASHDRTARLWSFARTYPL---RLYAGHLSDVDCVKFHPNSNYIATGSTDKT 461
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
+++W+T VR GH+ + L + + + S D ++LWD+ G + L GH
Sbjct: 462 VRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGH 521
Query: 437 EELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPT 474
+ + + F D+ + S + D ++VW++ A APT
Sbjct: 522 TDTISSLSFSQDSSLVASASMDNTVRVWDIRNA-HGSAPT 560
Score = 218 (81.8 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 67/248 (27%), Positives = 115/248 (46%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYDERVIISGSSDSTVRVWDV 301
D + +G ++ +K+W SL+ K+ G H V ++ V+ + D
Sbjct: 291 DSRLLAAGFDNSAVKLW---SLRARKLKAGPHKADVSKIRLACDVLEEEADDEDA----- 342
Query: 302 NTGEMVNTLIHHCEAVLHLRF---SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+G + TL H V F ++G++ +CS+D ++ WD+ S L R GH
Sbjct: 343 -SGSEIKTLRGHSGPVYRTAFLTDASGLL-SCSEDSTVRYWDLKSFTNTVLYR---GHAY 397
Query: 359 AVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGS 414
V VD Y +AS DRT ++W+ + +R GH + C+++ + +GS
Sbjct: 398 PVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGS 457
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA---LD 469
+D T+RLW GA +R+ GH V + F + K + S D ++K+W+L + D
Sbjct: 458 TDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKD 517
Query: 470 PRAPTTTL 477
R T T+
Sbjct: 518 LRGHTDTI 525
Score = 188 (71.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 54/190 (28%), Positives = 89/190 (46%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVII--SGSSDSTVRVWD 300
D ++S D+T++ WD S + GH V + + + S D T R+W
Sbjct: 365 DASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWS 424
Query: 301 VNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+ H V ++F ++ + T S D+++ +W S + R+ GHR
Sbjct: 425 FARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLW---STRQGASVRLFTGHRG 481
Query: 359 AVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDR-LVVSGS 414
V + F KY+ SA D+ +K+W+ +S + L GH I+ L + +D LV S S
Sbjct: 482 PVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASAS 541
Query: 415 SDNTIRLWDI 424
DNT+R+WDI
Sbjct: 542 MDNTVRVWDI 551
Score = 156 (60.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 47/213 (22%), Positives = 92/213 (43%)
Query: 139 VRTLNGHKRGIACLQY-RDRL-VVSGSSDNTIRYRD--EFQIVSSSHDDTILIWDFLNYS 194
++TL GH + + D ++S S D+T+RY D F +WD
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDV---D 403
Query: 195 ETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLR 252
+P + W + R+ + + V C+++ + + I +G
Sbjct: 404 VSPCSLYFSTASHDRTARL---WSFARTYPLRLY--AGHLSDVDCVKFHPNSNYIATGST 458
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTL 310
D T+++W +++ TGH G VL L + + + S D +++WD+ +G + L
Sbjct: 459 DKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDL 518
Query: 311 IHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDM 341
H + + L FS + ++ + S D ++ VWD+
Sbjct: 519 RGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 250 (93.1 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 69/247 (27%), Positives = 119/247 (48%)
Query: 243 DDHKIVSGLRDNTIKVW--DRVSLQCI------------KVLTGHTGSVLCLQY--DERV 286
D + +G +D+ IK+W D L+ + + L GH+G V + + D +
Sbjct: 472 DSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKY 531
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSP 344
++S S D TVR+W ++T + + H + V ++FS VT S D++ +W +
Sbjct: 532 LLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW---AT 588
Query: 345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
+ I R+ GH V+ V+F + Y+ + S D+T ++W+ + VR GH + C
Sbjct: 589 DHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNC 648
Query: 403 LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCIRF--DAKRIVSGAYDG 457
L R + SG D I +WDI G L+ + GH + + F D +VSG D
Sbjct: 649 LAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADN 708
Query: 458 KIKVWNL 464
++VW++
Sbjct: 709 SVRVWDV 715
Score = 195 (73.7 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 56/204 (27%), Positives = 103/204 (50%)
Query: 233 NSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVII 288
+S VY + + D+K ++S D T+++W + + GHT V +++ +
Sbjct: 516 HSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFV 575
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNE 346
+ S D T R+W + + H V + F ++ + T S D++ +WD+ + N
Sbjct: 576 TASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNC 635
Query: 347 ITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-IACL 403
+ RV +GH +VN V D +++ S D I VW+ S ++++ GH R + L
Sbjct: 636 V---RVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSL 692
Query: 404 QY-RDRLV-VSGSSDNTIRLWDIE 425
+ RD V VSG +DN++R+WD++
Sbjct: 693 AFSRDGTVLVSGCADNSVRVWDVK 716
Score = 108 (43.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT-GSVLCLQY--DERVIIS 289
NS + D + SG D I VWD S + +K + GH S+ L + D V++S
Sbjct: 644 NSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVS 703
Query: 290 GSSDSTVRVWDV--NTGE 305
G +D++VRVWDV NT +
Sbjct: 704 GCADNSVRVWDVKKNTND 721
Score = 74 (31.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 165
+S P D KY++S S D+T+++W+ + + + GH + + +++ V+ S D
Sbjct: 523 VSFSP--DNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHD 580
Query: 166 NTIR 169
T R
Sbjct: 581 QTAR 584
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 246 (91.7 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 69/226 (30%), Positives = 109/226 (48%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 224 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNK 283
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + VWD+ + + L GH V V
Sbjct: 284 VIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANV---HTLSGHTNTVATV 340
Query: 364 DFD--EKYIVSA-SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 418
E +V+ S D TI++W+ + + TL HK+ + L R SGS DN
Sbjct: 341 KCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDN- 399
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
I+ W G ++ L GH ++ + ++ + VSGA +G I +W+
Sbjct: 400 IKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWD 445
Score = 210 (79.0 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 66/228 (28%), Positives = 105/228 (46%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S D+T RVWD+ T V+TL
Sbjct: 271 DKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTL 330
Query: 311 IHHCEAVLHLRFSNG--MMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE 367
H V ++ + +VT S D +I +WD+V+ R L H+ +V +
Sbjct: 331 SGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKT---RATLTNHKKSVRALVLHP 387
Query: 368 KYIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE 425
+ ASG IK W F++ L+GH I L D ++VSG+ + TI +WD
Sbjct: 388 RQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDWR 447
Query: 426 CG-------ACLRV--LEGHEELVRCIRFDAK--RIVSGAYDGKIKVW 462
G A ++ L+ + C+ FD R+++ D IKV+
Sbjct: 448 TGYNFQRIHAAVQPGSLDSESGIFSCV-FDQSESRLITAEADKTIKVY 494
Score = 183 (69.5 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V V + Y+ S D+ +K
Sbjct: 220 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKC 276
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L + +V+ S D T R+WDI A + L GH
Sbjct: 277 WDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNT 336
Query: 440 V---RCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTT--LCLRTLVV 484
V +C + + + G++D I++W+LVA RA T +R LV+
Sbjct: 337 VATVKCQSAEPQVVTVGSHDTTIRLWDLVAG-KTRATLTNHKKSVRALVL 385
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 66/281 (23%), Positives = 118/281 (41%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+A + R + S D ++ D
Sbjct: 221 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVA-VSNRSPYLFSCGEDKQVKCWDL 279
Query: 173 EF-QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRS 231
E+ +++ H ++D + + I K + ++ +
Sbjct: 280 EYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRT-----KANVHTLSGHT 334
Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIIS 289
V C + + G D TI++WD V+ + LT H SV L R S
Sbjct: 335 NTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFAS 394
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEIT 348
GS D+ ++ W G + L H + L S+G++V+ + + +I +WD +
Sbjct: 395 GSPDN-IKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQ 453
Query: 349 LRRVLV--GHRAAVN-----VVDFDEKYIVSASGDRTIKVW 382
V G + + V D E +++A D+TIKV+
Sbjct: 454 RIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVY 494
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 349 LRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACL 403
L RV+ GH V V+ ++ V+ S DRTIK+W+ +S + +L GH RG+A +
Sbjct: 200 LYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVA-V 258
Query: 404 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKV 461
R + S D ++ WD+E +R GH V + +V+ + D +V
Sbjct: 259 SNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARV 318
Query: 462 WNL 464
W++
Sbjct: 319 WDI 321
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 259 (96.2 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 66/224 (29%), Positives = 121/224 (54%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKV---LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG 304
+SG D +K+WD SL+ ++ L GHTG+V + D I+SGS D +V VWD T
Sbjct: 871 ISGSTDCLVKIWDP-SLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIVWDKQTT 929
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGH-RAAVNV 362
+++ L H V ++ +G V T + D ++ +WD+ + + VG +A+
Sbjct: 930 QLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVAT----VGRCSSAILS 985
Query: 363 VDFDEKY-IVSASGDRTI-KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 420
+++D+ I++A+G T+ +W+ S + + L GH + I ++ + +++GS D T R
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLITGSDDWTAR 1045
Query: 421 LWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVW 462
+W + G+C VL H V+ + + K I++G+ DG ++ W
Sbjct: 1046 VWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFW 1089
Score = 253 (94.1 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 67/237 (28%), Positives = 119/237 (50%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS 294
V + D KIVSG D ++ VWD+ + Q ++ L GH V C++ ERV+ + + D
Sbjct: 902 VRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVL-TAAHDG 960
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
TV++WDV T V T+ A+L L + S G++ +D +WD+ S ++
Sbjct: 961 TVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQM---HK 1017
Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYR--DR 408
L GH + + E +++ S D T +VW+ S SC+ V L H + ++Y D+
Sbjct: 1018 LKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAV--LACHAGPVQSVEYSPFDK 1075
Query: 409 LVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
+++GS+D +R W+ + G C++ + H + I + GA D + +++
Sbjct: 1076 GIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSINAGENWLGIGAADNSMSLFH 1132
Score = 217 (81.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 61/217 (28%), Positives = 103/217 (47%)
Query: 267 IKVLTGHTGSVLCL--------------QYDERVIISGSSDSTVRVWD--VNTGEMVNTL 310
++VL GH G+V L + D ISGS+D V++WD + E+ TL
Sbjct: 836 VRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATL 895
Query: 311 IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKY 369
H V + G +V+ S D S+ VWD + L L GH + V+ V +
Sbjct: 896 KGHTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQ---LLEELKGHDSQVSCVKMLSGER 952
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG 427
+++A+ D T+K+W+ + V T+ I L+Y D ++ + D +WDI G
Sbjct: 953 VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSG 1012
Query: 428 ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
+ L+GH + +R IR +++G+ D +VW++
Sbjct: 1013 KQMHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSV 1049
Score = 213 (80.0 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 57/244 (23%), Positives = 115/244 (47%)
Query: 237 VYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSD 293
V C++ ++++ D T+K+WD + C+ + + ++L L+YD+ ++ + D
Sbjct: 942 VSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRD 1001
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
+ +WD+ +G+ ++ L H + + +R ++T S D + VW VS VL
Sbjct: 1002 TVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWS-VSRGSCDA--VL 1058
Query: 354 VGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRL 409
H V V++ +K I++ S D ++ W + V+ + H I + +
Sbjct: 1059 ACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSINAGENW 1118
Query: 410 VVSGSSDNTIRLWDIECGA--------CLRVLEGHEELVRCIRFDA--KRIVSGAYDGKI 459
+ G++DN++ L+ A RV + +VRC+ D KRI SG +G +
Sbjct: 1119 LGIGAADNSMSLFHRPSNAGTKVSGWQLYRVPQRTAAVVRCVASDLERKRICSGGRNGVL 1178
Query: 460 KVWN 463
++W+
Sbjct: 1179 RLWD 1182
Score = 180 (68.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 77/354 (21%), Positives = 146/354 (41%)
Query: 92 HGHINTYLKPMLQRDFISLLPNFDEK-YIVSASGDRTIKVWNTS--SCEFVRTLNGHKRG 148
HG T L + +R+ L+ + ++ + +S S D +K+W+ S E TL GH
Sbjct: 842 HGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGT 901
Query: 149 IACLQYRDRLVVSGSSDNTIRYRDE--FQIVSS--SHDDTILIWDFLNYSETPIQXXXXX 204
+ + +VSGS D ++ D+ Q++ HD + L+ E +
Sbjct: 902 VRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLS-GERVLTAAHDG 960
Query: 205 XXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRV 262
+ M + R C S + L+YDD + + RD +WD
Sbjct: 961 TVKMWDVRTD----MCVATVGR--C----SSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
Query: 263 SLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC---EAVLH 319
S + + L GHT + ++ E +I+GS D T RVW V+ G L H ++V +
Sbjct: 1011 SGKQMHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEY 1070
Query: 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 379
F G+ +T S D + W+ ++ + + H +++ ++ E ++ + D ++
Sbjct: 1071 SPFDKGI-ITGSADGLLRFWENDEGGIKCVKNITL-HSSSILSINAGENWLGIGAADNSM 1128
Query: 380 KVWN--------TSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWD 423
+++ S + R + C+ + + SG + +RLWD
Sbjct: 1129 SLFHRPSNAGTKVSGWQLYRVPQRTAAVVRCVASDLERKRICSGGRNGVLRLWD 1182
Score = 168 (64.2 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 61/288 (21%), Positives = 128/288 (44%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRY--- 170
D IVS S D ++ VW+ + + + L GH ++C++ V++ + D T++
Sbjct: 908 DRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDV 967
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRIN 228
R + + + + ++ L Y ++ + N W R GK +++
Sbjct: 968 RTDMCVATVGRCSSAIL--SLEYDDS-----TGILAAAGRDTVANIWDIRSGK----QMH 1016
Query: 229 CRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERV 286
++K + ++ + +++G D T +VW C VL H G V ++Y ++
Sbjct: 1017 KLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKG 1076
Query: 287 IISGSSDSTVRVWDVNTG--EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP 344
II+GS+D +R W+ + G + V + H ++L + + + D S++++ S
Sbjct: 1077 IITGSADGLLRFWENDEGGIKCVKNITLHSSSILSINAGENWLGIGAADNSMSLFHRPSN 1136
Query: 345 --NEIT---LRRVLVGHRAAVNVV--DFDEKYIVSASGDRTIKVWNTS 385
+++ L RV A V V D + K I S + +++W+ +
Sbjct: 1137 AGTKVSGWQLYRVPQRTAAVVRCVASDLERKRICSGGRNGVLRLWDAT 1184
Score = 39 (18.8 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 143 NGHKRGIACLQYRDRL 158
+G K ++C+ +RDR+
Sbjct: 92 DGSKIFVSCIAFRDRV 107
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 239 (89.2 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 66/257 (25%), Positives = 113/257 (43%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQY--DERVIISGSSDSTV 296
L DD G + + +WD QC+ + G + C++Y D + ISG+ +
Sbjct: 1172 LSNDDKYAACGTNNGIVALWDLEVCQCVFTTIQNKGDPITCIRYSVDSQYCISGNQAGCI 1231
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLR-FSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
+ D G +V L H VL + + M++C + +W++ ++ T V G
Sbjct: 1232 LILDAQNGGVVRELFMHSSEVLSIMSLVHNKMISCDIQGKMVIWELFGDDD-TPEMVATG 1290
Query: 356 HRAAVNVVDFDEKYIVSAS-GDRTIKVWN--TSSCEFVRTLNGHKRGIACLQYRDR---L 409
+ + V + S ++ +K+W R H I C +
Sbjct: 1291 VKPPIFVPPTGRIMVGHCSLSNKEMKIWAFPEEGPPVTRAKLSHSDEITCFATSPKGGNF 1350
Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDAKRIVSGAYDGKIKVWN---- 463
+ +GS D ++++W I+ G +VL GHE +V C I FD + +VSGA D KI VWN
Sbjct: 1351 IATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSG 1410
Query: 464 -LVAALDPRAPTTTLCL 479
+V ++ A T+L +
Sbjct: 1411 DMVCTVNTTAAITSLSM 1427
Score = 191 (72.3 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 80/367 (21%), Positives = 156/367 (42%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRY-- 170
D VS S D+T+ VW S +L H + C L D+ +++ S+D++ +
Sbjct: 922 DSSLFVSTSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITASADSSAKMIK 981
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
+ +++ S +D T + S + N GK + +
Sbjct: 982 LETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTN----GKCISRMGGLM 1037
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG---SVLCLQYDERVI 287
+ S + +D +V D T+KV+ V Q + L GH G S++C Q D ++
Sbjct: 1038 APVS--TLAITSNDAFVVVACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQDDCQLF 1095
Query: 288 ISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFS--NGMMVT-CSKDRSIAVWDMVS 343
++ S V +D++ G+M++ L + L+ S N +++ C + +W++
Sbjct: 1096 --AATKSKVFCYDIHNGQMIDVLDTAQPFPICSLKISSDNYFLISPCGP--KVTIWNVTK 1151
Query: 344 PNEIT--LRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-I 400
N + G AV + + D+KY + + + +W+ C+ V T +K I
Sbjct: 1152 RNHDAHDVHADKEGFLTAVALSN-DDKYAACGTNNGIVALWDLEVCQCVFTTIQNKGDPI 1210
Query: 401 ACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRFDAKRIVSGAYDG 457
C++Y + +SG+ I + D + G +R L H E++ + +++S G
Sbjct: 1211 TCIRYSVDSQYCISGNQAGCILILDAQNGGVVRELFMHSSEVLSIMSLVHNKMISCDIQG 1270
Query: 458 KIKVWNL 464
K+ +W L
Sbjct: 1271 KMVIWEL 1277
Score = 190 (71.9 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 60/236 (25%), Positives = 111/236 (47%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC--LQYDERVIISGSSDSTV 296
C D VS D T+ VW LT HT V C L D++ +I+ S+DS+
Sbjct: 918 CSSNDSSLFVSTSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITASADSSA 977
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
++ + TGE++ + H +V+ L+ + N ++T S D + +WD+ + I+ L+
Sbjct: 978 KMIKLETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLM 1037
Query: 355 GHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVV 411
+ + + D ++V A D T+KV++T + + L GH+ + C Q D +
Sbjct: 1038 APVSTLAITSNDA-FVVVACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQ--DDCQL 1094
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRC---IRFDAKRIVSGAYDGKIKVWNL 464
++ + + +DI G + VL+ + C I D ++S K+ +WN+
Sbjct: 1095 FAATKSKVFCYDIHNGQMIDVLDTAQPFPICSLKISSDNYFLISPC-GPKVTIWNV 1149
Score = 174 (66.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 52/201 (25%), Positives = 103/201 (51%)
Query: 276 SVLCLQYDER-VIISGS-SD-STVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC 330
+VL L + + ++ISG+ SD + + + + +++ T H AV L SN + V+
Sbjct: 870 TVLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVST 929
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCE 388
S D+++ VW + S + T+ L H A V ++ D++Y+++AS D + K+ + E
Sbjct: 930 SFDKTVNVW-VFSQSTPTMS--LTHHTAKVTCAILTSDDQYLITASADSSAKMIKLETGE 986
Query: 389 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 446
+R+ N H + LQ ++ +++GS D +++WD+ G C+ + G V +
Sbjct: 987 VMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAIT 1046
Query: 447 AKR--IVSGAYDGKIKVWNLV 465
+ +V D +KV++ V
Sbjct: 1047 SNDAFVVVACEDETLKVFSTV 1067
Score = 155 (59.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 72/369 (19%), Positives = 150/369 (40%)
Query: 115 DEKYIVSASGDRT----IKVWNTSSCEFVRTLNGHKRGIACL-QYRDR-LVVSGSSDNTI 168
+ +YI+ SG+++ I ++ +S + + T GH + CL D L VS S D T+
Sbjct: 877 NHQYIL-ISGNQSDPGVIYAYHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVSTSFDKTV 935
Query: 169 R---YRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQ 225
+ +S +H + L S+ +E M F
Sbjct: 936 NVWVFSQSTPTMSLTHHTAKVTCAILT-SDDQYLITASADSSAKMIKLETGEVMRSF--- 991
Query: 226 RINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLCLQ 281
++++ V LQ + +++G D +++WD + +CI + G S L +
Sbjct: 992 -----NDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAIT 1046
Query: 282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVW 339
++ ++ D T++V+ G+ ++ L+ H V L + + +K + + +
Sbjct: 1047 SNDAFVVVACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQDDCQLFAATKSK-VFCY 1105
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN-TSSCEFVRTLNGHKR 398
D+ + I + + D +++S G + + +WN T ++ K
Sbjct: 1106 DIHNGQMIDVLDTAQPFPICSLKISSDNYFLISPCGPK-VTIWNVTKRNHDAHDVHADKE 1164
Query: 399 GI---ACLQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRF--DAKRIVS 452
G L D+ G+++ + LWD+E C ++ + + CIR+ D++ +S
Sbjct: 1165 GFLTAVALSNDDKYAACGTNNGIVALWDLEVCQCVFTTIQNKGDPITCIRYSVDSQYCIS 1224
Query: 453 GAYDGKIKV 461
G G I +
Sbjct: 1225 GNQAGCILI 1233
Score = 136 (52.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC--LQYDERVIISGSSDSTVRVWDVNTG 304
I +G RD ++K+W +VL GH V C + +DER+++SG+ D + VW+V +G
Sbjct: 1351 IATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSG 1410
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS--KDRSIAVW 339
+MV T ++ A+ L + V S +D + W
Sbjct: 1411 DMVCT-VNTTAAITSLSMTGDSTVVFSTTEDGWVETW 1446
Score = 122 (48.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 32/156 (20%), Positives = 68/156 (43%)
Query: 251 LRDNTIKVW--DRVSLQCIKVLTGHTGSVLCLQYDER---VIISGSSDSTVRVWDVNTGE 305
L + +K+W + H+ + C + I +GS D ++++W ++ G
Sbjct: 1310 LSNKEMKIWAFPEEGPPVTRAKLSHSDEITCFATSPKGGNFIATGSRDMSLKIWQIDKGF 1369
Query: 306 MVNTLIHHCEAVLH--LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ L+ H V + F ++V+ ++D I VW++ S + + V AA+ +
Sbjct: 1370 LTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSGDMVCT----VNTTAAITSL 1425
Query: 364 DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
D + S + D ++ W+T+ + T N H+
Sbjct: 1426 SMTGDSTVVFSTTEDGWVETWSTTKGRLLSTFNAHR 1461
Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS--LQCIKVLTGHT 274
W++ K L ++ EN C+ +D+ +VSG RD I VW+ S + C T
Sbjct: 1363 WQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSGDMVCTVNTTAAI 1422
Query: 275 GSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHH 313
S L + D V+ S + D V W G +++T H
Sbjct: 1423 TS-LSMTGDSTVVFSTTEDGWVETWSTTKGRLLSTFNAH 1460
Score = 64 (27.6 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 13/64 (20%), Positives = 33/64 (51%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 165
+SL + +++++ SGD +++W+ ++ + + + G ++ L D VV D
Sbjct: 999 VSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAFVVVACED 1058
Query: 166 NTIR 169
T++
Sbjct: 1059 ETLK 1062
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 247 (92.0 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 77/249 (30%), Positives = 114/249 (45%)
Query: 216 NWRMGKF--LLQRINCRSENSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLT 271
N GK LLQ + + E V + + D K + +G+ D I++WD + ++LT
Sbjct: 326 NVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLT 385
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV 328
GH + L + D + ++SGS D TV +WDV GE ++H + V + FS +G +
Sbjct: 386 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ-KLILHTDDGVTTVMFSPDGQFI 444
Query: 329 TC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
S D+ I +W TL L GH +V V F D KY+VS S D TIK+W
Sbjct: 445 AAGSLDKVIRIWTSSG----TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
Query: 386 SCEFV------------RTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLR 431
V +T GHK I + + ++SGS D TI+ W +
Sbjct: 501 CVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQL 560
Query: 432 VLEGHEELV 440
L+GH V
Sbjct: 561 TLQGHNNSV 569
Score = 228 (85.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 59/201 (29%), Positives = 105/201 (52%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWD 340
D + + +G D +R+WD+ + L H + + L FS +G +V+ S DR++ +WD
Sbjct: 357 DGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
V E +++++ V V F D ++I + S D+ I++W TSS V L+GH+
Sbjct: 417 -VEAGE---QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEE 471
Query: 399 GIACLQYRD--RLVVSGSSDNTIRLWDIEC------------GACLRVLEGHEELVRCIR 444
+ + + + +VSGS DNTI+LW+++C G C + GH++ + +
Sbjct: 472 SVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVT 531
Query: 445 F--DAKRIVSGAYDGKIKVWN 463
D K I+SG+ D I+ W+
Sbjct: 532 VSPDGKWIISGSKDRTIQFWS 552
Score = 228 (85.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 69/220 (31%), Positives = 117/220 (53%)
Query: 262 VSLQCIKVLTGHTGSVLC-LQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC---E 315
+S+Q + L HT SV+C +++ D + + +G + + + V++V TG+++ L E
Sbjct: 288 ISVQLLHTLE-HT-SVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKRE 344
Query: 316 AVLHLR---FS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK 368
L++R FS +G + T +D+ I +WD+ + R+L GH + +DF D K
Sbjct: 345 GDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKR---VYRLLTGHEQEIYSLDFSKDGK 401
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 426
+VS SGDRT+ +W+ + E L+ G+ + + + + +GS D IR+W
Sbjct: 402 TLVSGSGDRTVCLWDVEAGEQKLILHTDD-GVTTVMFSPDGQFIAAGSLDKVIRIWT-SS 459
Query: 427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
G + L GHEE V + F D K +VSG+ D IK+W L
Sbjct: 460 GTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 499
Score = 195 (73.7 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 60/207 (28%), Positives = 100/207 (48%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+Y L + D +VSG D T+ +WD Q + + T + + D + I +GS D
Sbjct: 391 IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLD 450
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDM-----VSPNE 346
+R+W ++G +V L H E+V + FS +G +V+ S D +I +W++ V+P+
Sbjct: 451 KVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSM 509
Query: 347 IT----LRRVLVGHRAAV-NV-VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
++ GH+ + +V V D K+I+S S DRTI+ W+ S TL GH +
Sbjct: 510 YKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSV 569
Query: 401 --ACLQYRDRLVVSGSSDNTIRLWDIE 425
+ +GS D R+W E
Sbjct: 570 ISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRYRD 172
D KY+ + D+ I++W+ + R L GH++ I L + +D + +VSGS D T+ D
Sbjct: 357 DGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSE 232
V + IL D + + W L+++++ E
Sbjct: 417 ----VEAGEQKLILHTDD-GVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEE 471
Query: 233 NSKGVYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQ------------CIKVLTGHTGSVL 278
+ VY + + D K +VSG DNTIK+W+ + C + TGH +L
Sbjct: 472 S---VYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFIL 528
Query: 279 CLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDR 334
+ D + IISGS D T++ W ++ TL H +V+ + S NG T S D
Sbjct: 529 SVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDL 588
Query: 335 SIAVW 339
+W
Sbjct: 589 RARIW 593
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 250 (93.1 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 66/252 (26%), Positives = 125/252 (49%)
Query: 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE 284
+++ S+ K V L + +++ L + ++ VW+ + +K V ++
Sbjct: 9 RKLTAMSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 67
Query: 285 RV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWD 340
R +++G+ D +RV++ NT E V+ H + + + + + ++T S D I +WD
Sbjct: 68 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
+ + +V GH V + D SAS DRTIKVW S TL GH+
Sbjct: 128 W--DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 185
Query: 398 RGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IV 451
+G+ C+ Y D+ ++SG+ D +++WD + C++ EGH + V C F + I+
Sbjct: 186 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIII 245
Query: 452 SGAYDGKIKVWN 463
+G+ DG +++W+
Sbjct: 246 TGSEDGTVRIWH 257
Score = 167 (63.8 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 56/226 (24%), Positives = 98/226 (43%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRYRDE 173
+ ++V+ + D I+V+N ++ E V H I C+ +++ S D I+ D
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN---WRMGKFLLQRINCR 230
+ S S +++ + I ++ W++G N
Sbjct: 129 DKKWSCSQ-----VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS---SSPNFT 180
Query: 231 SE-NSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER 285
E + KGV C+ Y D ++SG D +K+WD + C++ GH +V C +
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPE 240
Query: 286 --VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGM 326
+II+GS D TVR+W +T + +TL + E V LR SN +
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 150 (57.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 48/192 (25%), Positives = 89/192 (46%)
Query: 224 LQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWD-RVSLQCIKVLTGHTGSVLCL 280
L+R++ +S + C+ + I++ D IK+WD C +V GHT V+ +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 148
Query: 281 QY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKD 333
D S S D T++VW + + TL H + V + + +G +++ + D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 208
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVR 391
R + +WD N+ T + GH V+ F + I++ S D T+++W++S+
Sbjct: 209 RLVKIWDY--QNK-TCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLES 265
Query: 392 TLNGHKRGIACL 403
TLN + C+
Sbjct: 266 TLNYGMERVWCV 277
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 335 SIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL 393
S+ VW+ + + V + RAA V + ++V+ + D I+V+N ++ E V
Sbjct: 38 SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR--KNWVVTGADDMQIRVFNYNTLERVHMF 95
Query: 394 NGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAK-- 448
H I C+ +++ S D I+LWD + +C +V EGH V I + K
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDN 155
Query: 449 -RIVSGAYDGKIKVWNL 464
+ S + D IKVW L
Sbjct: 156 NQFASASLDRTIKVWQL 172
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 242 (90.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MM 327
GH +V C+ + + + + SGS DST+ +W + H +AV + FS +G ++
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+D+++ +W E T+ R H A V V F D + +V+AS D+T+KVW+T
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRA---HTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
F+ +L H + C ++ RL+VS S D T++LWD C+ H V +
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYV 193
Query: 444 RFDAKR--IVSGAYDGKIKVWN 463
F I + D +KVW+
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWD 215
Score = 236 (88.1 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 64/239 (26%), Positives = 114/239 (47%)
Query: 237 VYCLQYDD--HKIVSGLRDNTIKVW-DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
V C+ + H + SG RD T+++W V + V HT +V + + D + +++ S
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTAS 122
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITL 349
D TV+VW + + +L H V +FS +G ++V+ S D+++ +WD S I
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECI-- 180
Query: 350 RRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V VDF ++A+G D T+KVW+ + ++ H + L +
Sbjct: 181 -HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP 239
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
+++ SSD+T+++ D+ G L L GH+ + F + SG D ++ VW
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 227 (85.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 76/297 (25%), Positives = 124/297 (41%)
Query: 105 RDFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVS 161
RD ++ + + + K++ S S D T+ +W+ GHK + C+ + L+ S
Sbjct: 19 RDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLAS 78
Query: 162 GSSDNTIRY-----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN 216
GS D T+R + E V +H T+ F + ++ + +
Sbjct: 79 GSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST---HR 134
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
R L Q IN V C ++ D IVS D T+K+WD+ S +CI H
Sbjct: 135 QRFLFSLTQHINW-------VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG 187
Query: 275 GSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTC 330
G V + + I + D+TV+VWD T ++ H AV L F S ++T
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITA 247
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTS 385
S D ++ + D++ E L L GH+ V F +Y S D + VW ++
Sbjct: 248 SSDSTLKILDLM---EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 221 (82.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 71/297 (23%), Positives = 130/297 (43%)
Query: 140 RTLNGHKRGIACLQY--RDRLVVSGSSDNTI---RYRDEFQIVS-SSHDDTILIWDFLNY 193
R GH+ + C+ + + + SGS D+T+ + + + + H D + +N+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC---VNF 69
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
S + + N G+ + R + + S +C D +V+ D
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNV--KGESTVFRAHTATVRSVH-FCS--DGQSLVTASDD 124
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
T+KVW + + LT H V C ++ D R+I+S S D TV++WD + E +++
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC 184
Query: 312 HHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK- 368
H V ++ F S + D ++ VWD + L+ + H AAVN + F
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD--ARTHRLLQHYQL-HSAAVNALSFHPSG 241
Query: 369 -YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLW 422
Y+++AS D T+K+ + + TL+GH+ + + SG SD + +W
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 172 (65.6 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 343 SPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
S + +L R GHR AV VDF + K++ S S D T+ +W+ GHK +
Sbjct: 5 SQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAV 64
Query: 401 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD 456
C+ + L+ SGS D T+R+W V H VR + F D + +V+ + D
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDD 124
Query: 457 GKIKVWN 463
+KVW+
Sbjct: 125 KTVKVWS 131
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 242 (90.2 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 65/251 (25%), Positives = 110/251 (43%)
Query: 233 NSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L ++ + + +G D ++W L H G + L+++ + I+
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNRKGNYIL 345
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +CS D I V + +
Sbjct: 346 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 405
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ + L H + I +++
Sbjct: 406 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKW 462
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWDIE G C L H+E V + F D K + S
Sbjct: 463 SPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLAS 522
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 523 GSFDKCVHIWN 533
Score = 148 (57.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + ++ L H + + +++S
Sbjct: 405 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 464
Query: 324 ----------NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD + T L H+ V V F D KY+
Sbjct: 465 TGPATSNPNSNIMLASASFDSTVRLWD-IERGVCT--HTLTKHQEPVYSVAFSPDGKYLA 521
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 522 SGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 575
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 48/199 (24%), Positives = 87/199 (43%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 227 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 315 --EAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L ++ NG ++ T S D +W + L L H+ + + ++ K
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWT----EDGNLASTLGQHKGPIFALKWNRKGN 342
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S S+D I + + C
Sbjct: 343 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCD 402
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 403 RPVKTFQGHTNEVNAIKWD 421
Score = 130 (50.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 40/195 (20%), Positives = 84/195 (43%)
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVS 343
++ +GS D R+W G + +TL H + L+++ +++ D++ +WD
Sbjct: 302 LLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWD-AH 359
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
E ++ H A VD+ S S D I V V+T GH +
Sbjct: 360 TGEA--KQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNA 417
Query: 403 LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK-----------R 449
+++ L+ S S D T+++W ++ C+ L+ H + + I++
Sbjct: 418 IKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIM 477
Query: 450 IVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 478 LASASFDSTVRLWDI 492
Score = 47 (21.6 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 119 IVSASGDRTIKVWN 132
+ S SGD T ++WN
Sbjct: 247 LASGSGDSTARIWN 260
Score = 47 (21.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N + + + S D ++W T TL HK I L++ + G+
Sbjct: 289 KDVTSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKWNRK----GN- 342
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 343 -----Y-----ILSAGVDKTTIIWD 357
Score = 43 (20.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 343 YILSAGVDKTTIIWDAHTGE 362
Score = 38 (18.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTAR 257
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 243 (90.6 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 65/260 (25%), Positives = 119/260 (45%)
Query: 224 LQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
+Q+ ++K V L + D + +G D ++W + + L H G + L+
Sbjct: 400 IQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIW-KTDGRLASTLGQHKGPIFALK 458
Query: 282 YDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAV 338
+++ I+S D T +WD +TG+ H L + + +N +CS D+ I V
Sbjct: 459 WNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHV 518
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
+ NE + GH VN + + + + S S D T+K+W+ + L H
Sbjct: 519 CRL-GVNEPI--KTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAH 575
Query: 397 KRGIACLQYR-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445
+ I +++ + ++ S S D+T+RLWD+E G+C+ L H E V + F
Sbjct: 576 SKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAF 635
Query: 446 --DAKRIVSGAYDGKIKVWN 463
D K + SG++D + +W+
Sbjct: 636 SPDGKHLASGSFDKCVHIWS 655
Score = 152 (58.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 52/250 (20%), Positives = 104/250 (41%)
Query: 235 KG-VYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISG 290
KG ++ L+++ + I+S D T +WD + QC + H+ L + + + S
Sbjct: 451 KGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASC 510
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEIT 348
S+D + V + E + T H V +++ G ++ +CS D ++ +W M N
Sbjct: 511 STDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSM---NRDR 567
Query: 349 LRRVLVGHRAAVNVVDFDEK-----------YIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
L H + + + + SAS D T+++W+ + TL H
Sbjct: 568 CCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHT 627
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGA 454
+ + + + + SGS D + +W + G + +G + C ++ + A
Sbjct: 628 EPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGASA 687
Query: 455 YDGKIKVWNL 464
DG + V +L
Sbjct: 688 SDGSVFVLDL 697
Score = 149 (57.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 51/219 (23%), Positives = 97/219 (44%)
Query: 247 IVSGLRDNTIKVWDR----------VSLQCIKVLTGHTGS---VLCLQY--DERVIISGS 291
+ SG D+T ++WD V CI+ S V L + D ++ +GS
Sbjct: 370 LASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGS 429
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITL 349
D R+W + G + +TL H + L+++ +++ D++ +WD S + T
Sbjct: 430 YDGYARIWKTD-GRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWD-ASTGQCTQ 487
Query: 350 RRVLVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--R 406
+ H A VD+ + S S D+ I V E ++T GH + +++ +
Sbjct: 488 QFAF--HSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQ 545
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445
+L+ S S D T+++W + C L+ H + + I++
Sbjct: 546 GQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKW 584
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 50/219 (22%), Positives = 98/219 (44%)
Query: 268 KVLTGHTGSV-LCLQYDER-VIISGSSDSTVRVWDVNTGEM-VNTLI-HHC--------- 314
+VL GH V +C R ++ SGS DST R+WD++ N L+ HC
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVP 408
Query: 315 --EAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--K 368
+ V L ++ ++ T S D +W + L L H+ + + +++
Sbjct: 409 SNKDVTSLDWNCDGSLLATGSYDGYARIWK----TDGRLASTLGQHKGPIFALKWNKCGN 464
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ S+ + + H + ++ ++ S S+D I + +
Sbjct: 465 YILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVN 524
Query: 428 ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
++ +GH V I++ + + S + D +K+W++
Sbjct: 525 EPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSM 563
Score = 54 (24.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 24/85 (28%), Positives = 35/85 (41%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + + S D ++W T TL HK I L++ G+
Sbjct: 411 KDVTSLDWNCDGSLLATGSYDGYARIWKTDG-RLASTLGQHKGPIFALKWNK----CGN- 464
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 465 -----Y-----ILSAGVDKTTIIWD 479
Score = 52 (23.4 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDRLVVSGSSDNTIRYR-DEFQI 176
+ S SGD T ++W+ S N ++ + C+Q V S ++ + D +
Sbjct: 370 LASGSGDSTARIWDMSDAN----TNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLL 425
Query: 177 VSSSHDDTILIW 188
+ S+D IW
Sbjct: 426 ATGSYDGYARIW 437
Score = 49 (22.3 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 140 RTLNGHKRGI-ACLQYRDR-LVVSGSSDNTIRYRD 172
R L GH+ + C R L+ SGS D+T R D
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWD 383
Score = 37 (18.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 176 IVSSSHDDTILIWD 189
+ S S D T IWD
Sbjct: 370 LASGSGDSTARIWD 383
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 245 (91.3 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 57/209 (27%), Positives = 101/209 (48%)
Query: 269 VLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--N 324
+L GH+G V + ++S S+D+T+R+W + H V +FS
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 382
+CS DR+ +W M + I R++ GH + V+ V + YI + S D+T+++W
Sbjct: 473 HYFASCSHDRTARIWSM---DRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLW 529
Query: 383 NTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
+ + E VR GH+ + L R + SG D TI +WD+ C+ L GH V
Sbjct: 530 DVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 589
Query: 441 RCIRF--DAKRIVSGAYDGKIKVWNLVAA 467
+ + + + SG+ D +K+W++ ++
Sbjct: 590 WSLSYSGEGSLLASGSADCTVKLWDVTSS 618
Score = 242 (90.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 69/243 (28%), Positives = 112/243 (46%)
Query: 236 GVYC--LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
G+ C + +D + G D++IKVWD + G GS LQ + + SSD
Sbjct: 354 GLNCSSISHDGSLVAGGFSDSSIKVWDMAKI-------GQAGSG-ALQAE-----NDSSD 400
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDM-VSPNEITLR 350
++ N L+ H V FS +++ S D +I +W ++ N + +
Sbjct: 401 QSI---GPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK 457
Query: 351 RVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR 408
GH V F Y S S DRT ++W+ + +R + GH + C+Q+
Sbjct: 458 ----GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPN 513
Query: 409 L--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
+ +GSSD T+RLWD++ G C+R+ GH +V + D + + SG DG I +W+L
Sbjct: 514 CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
Query: 465 VAA 467
A
Sbjct: 574 STA 576
Score = 179 (68.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 38/138 (27%), Positives = 72/138 (52%)
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDH--KIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
W M + +Q + + + V C+Q+ + I +G D T+++WD + +C+++ GH
Sbjct: 487 WSMDR--IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHR 544
Query: 275 GSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC 330
VL L D R + SG D T+ +WD++T + L+ H V L +S ++ +
Sbjct: 545 SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASG 604
Query: 331 SKDRSIAVWDMVSPNEIT 348
S D ++ +WD+ S ++T
Sbjct: 605 SADCTVKLWDVTSSTKLT 622
Score = 55 (24.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIR 169
+++S+S D TI++W+T + GH + Q+ S S D T R
Sbjct: 432 FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Score = 46 (21.3 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 135 SCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRYRDEFQI 176
S F +N H G+ C + + LV G SD++I+ D +I
Sbjct: 342 SVSFYTFVNTHN-GLNCSSISHDGSLVAGGFSDSSIKVWDMAKI 384
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 244 (91.0 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 60/205 (29%), Positives = 107/205 (52%)
Query: 268 KVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-- 323
+V++GH G V C+ + + ++GS+D T+++WD+ +G++ +L H V + S
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 257
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKV 381
+ + +C +D+ + WD+ N++ R GH +AV +D +V+ S D T ++
Sbjct: 258 SPYLFSCGEDKQVKCWDL-EYNKVI--RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 382 WNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + V TL+GH +A + Q + +++GS D TIRLWD+ G L H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 374
Query: 440 VRCIRFDAKR--IVSGAYDGKIKVW 462
VR + SG+ D IK W
Sbjct: 375 VRAVVLHPLHYTFASGSPDN-IKQW 398
Score = 241 (89.9 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 67/225 (29%), Positives = 108/225 (48%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGE 305
V+G D TIK+WD S + LTGH +V + R + S D V+ WD+ +
Sbjct: 220 VTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK 279
Query: 306 MVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
++ H AV L L + ++VTCS+D + +WD+ + + L GH AV V
Sbjct: 280 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASV---HTLSGHTNAVATV 336
Query: 364 DFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTI 419
E I++ S D TI++W+ + + TL HK+ + L SGS DN I
Sbjct: 337 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-I 395
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWN 463
+ W G ++ L GH ++ + + + VSGA +G + +W+
Sbjct: 396 KQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWD 440
Score = 217 (81.4 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 59/181 (32%), Positives = 87/181 (48%)
Query: 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
D +K WD + I+ GH +V L V+++ S DST R+WDV T V+TL
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK 368
H AV +R + ++T S D +I +WD+V+ R L H+ +V V
Sbjct: 327 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT---RVTLTNHKKSVRAVVLHPL 383
Query: 369 YIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIEC 426
+ ASG IK W F++ L+GH I L D ++VSG+ + T+ LWD
Sbjct: 384 HYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRT 443
Query: 427 G 427
G
Sbjct: 444 G 444
Score = 201 (75.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
N VT S DR+I +WD+ S L+ L GH + V +V Y+ S D+ +K
Sbjct: 216 NQWFVTGSADRTIKIWDLASGK---LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKC 272
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEEL 439
W+ + +R +GH + L + +V+ S D+T R+WD+ A + L GH
Sbjct: 273 WDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 332
Query: 440 VRCIRFDAK--RIVSGAYDGKIKVWNLVA 466
V +R A +I++G++D I++W+LVA
Sbjct: 333 VATVRCQAAEPQIITGSHDTTIRLWDLVA 361
Score = 139 (54.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTG 304
+V+ RD+T ++WD + + L+GHT +V + Q E II+GS D+T+R+WD+ G
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 362
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
+ TL +H ++V + S +I W P+ ++ L GH A +N +
Sbjct: 363 KTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNIKQWKF--PDGGFIQN-LSGHNAIINTL 419
Query: 364 DFD-EKYIVSASGDRTIKVWN 383
+ + +VS + + T+ +W+
Sbjct: 420 AVNTDGVLVSGADNGTMHLWD 440
Score = 111 (44.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 41/157 (26%), Positives = 73/157 (46%)
Query: 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDS 294
V C Q + +I++G D TI++WD V+ + LT H SV + L SGS D+
Sbjct: 336 VRC-QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN 394
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRV 352
++ W G + L H A+++ N G++V+ + + ++ +WD +
Sbjct: 395 -IKQWKFPDGGFIQNLSGH-NAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRVHA 452
Query: 353 LV-----GHRAAVNVVDFD--EKYIVSASGDRTIKVW 382
V + + FD E +++A D+TIKV+
Sbjct: 453 AVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 489
Score = 72 (30.4 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACLQYRDRLVVSGSSDNTIRYRD- 172
++ V+ S DRTIK+W+ +S + +L GH RG+ + R + S D ++ D
Sbjct: 217 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI-VSTRSPYLFSCGEDKQVKCWDL 275
Query: 173 EF-QIVSSSH 181
E+ +++ H
Sbjct: 276 EYNKVIRHYH 285
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 224 (83.9 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 62/222 (27%), Positives = 106/222 (47%)
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK--VLTGHTGSVLCLQYDERVIISG 290
N GV Q + + +G D T+K+WD + C + + +V+ L ++ +ISG
Sbjct: 78 NVTGVG-FQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNTVV-LHPNQAELISG 135
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEA-VLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEI 347
+ ++RVWD+ + L+ E + L S+ G++V + VW + +
Sbjct: 136 DQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKGKCFVWRLGEDDTS 195
Query: 348 TLRRV--LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI-AC 402
+ + H A + F D K + + S D T+K+WNT V+TLNGH+R + C
Sbjct: 196 RFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTLNGHQRWVWDC 255
Query: 403 LQYRDRL-VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
D +V+GSSD+ RLWD+ G ++ GH + V +
Sbjct: 256 AFSNDSAYLVTGSSDHLSRLWDLHQGDAVKTYSGHIKAVNAV 297
Score = 169 (64.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 68/305 (22%), Positives = 136/305 (44%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDEFQIV 177
+ +AS D TIK W+ S R+++ + I L+ D+L ++ + + R F+ V
Sbjct: 6 LATASYDHTIKFWDPPSGGCYRSIDCGEFHINRLEITHDKLYIAAAGNPQTRL---FE-V 61
Query: 178 SSSHDDTILIWDFLNYSETPI--QXXXXXXXXXXXXXIENNWRMGKFLLQR-INCRSENS 234
+++++ + +D + T + Q W + QR C + +
Sbjct: 62 NTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVN 121
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTG-SVLCLQYDERVIISGS 291
V L + +++SG ++ +I+VWD +S C + L G G + L + D ++++ +
Sbjct: 122 TVV--LHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASN 179
Query: 292 SDSTVRVW-----DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSP 344
+ VW D + E + + H +L FS ++ TCS D ++ +W+
Sbjct: 180 TKGKCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKF 239
Query: 345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402
N + + L GH+ V F D Y+V+ S D ++W+ + V+T +GH + +
Sbjct: 240 NVV---QTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQGDAVKTYSGHIKAVNA 296
Query: 403 LQYRD 407
+ D
Sbjct: 297 VALND 301
Score = 150 (57.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 49/208 (23%), Positives = 102/208 (49%)
Query: 272 GHTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH---LRFSNGM 326
GH G+V + Q + + + +GS D TV++WD+ + C A ++ L +
Sbjct: 74 GHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRD--YECSAPVNTVVLHPNQAE 131
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV-VDFDEKYIVSASGDRTIKVW--- 382
+++ ++ SI VWD++S N + V G ++ + D +V+++ VW
Sbjct: 132 LISGDQNGSIRVWDLIS-NTCSRELVPDGEVGITSLTISSDGGLVVASNTKGKCFVWRLG 190
Query: 383 --NTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438
+TS E ++ + H I + +L+ + S+D+T+++W+ + ++ L GH+
Sbjct: 191 EDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTLNGHQR 250
Query: 439 LVRCIRF--DAKRIVSGAYDGKIKVWNL 464
V F D+ +V+G+ D ++W+L
Sbjct: 251 WVWDCAFSNDSAYLVTGSSDHLSRLWDL 278
Score = 134 (52.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 39/168 (23%), Positives = 83/168 (49%)
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRTIKVW-- 382
++ T S D +I WD P+ R + G +N ++ +K ++A+G+ +++
Sbjct: 5 ILATASYDHTIKFWD--PPSGGCYRSIDCGE-FHINRLEITHDKLYIAAAGNPQTRLFEV 61
Query: 383 NTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
NT++ + +GHK + + Q + + +GS D T+++WD++ C R E +
Sbjct: 62 NTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVN 121
Query: 441 RCIRF-DAKRIVSGAYDGKIKVWNLVAALDPR--APTTTLCLRTLVVS 485
+ + ++SG +G I+VW+L++ R P + + +L +S
Sbjct: 122 TVVLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTIS 169
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/212 (23%), Positives = 94/212 (44%)
Query: 117 KYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
K++ + S D T+K+W+ + C+ + + L ++SG + +IR D
Sbjct: 89 KWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNTVV-LHPNQAELISGDQNGSIRVWD-- 145
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG-----KFL-LQRIN 228
++S++ ++ + + I WR+G +F LQ+I
Sbjct: 146 -LISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKGKCFVWRLGEDDTSRFEPLQKIE 204
Query: 229 CRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDRVSLQCIKVLTGHTGSVL-C-LQYDER 285
+ N+ + L D K+++ D+T+K+W+ ++ L GH V C D
Sbjct: 205 --AHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTLNGHQRWVWDCAFSNDSA 262
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317
+++GSSD R+WD++ G+ V T H +AV
Sbjct: 263 YLVTGSSDHLSRLWDLHQGDAVKTYSGHIKAV 294
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRL-VVSGSSDNTIRYRD 172
D K + + S D T+K+WNT V+TLNGH+R + C D +V+GSSD+ R D
Sbjct: 218 DTKLLATCSADHTVKIWNTKKFNVVQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWD 277
Query: 173 EFQ 175
Q
Sbjct: 278 LHQ 280
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 40/187 (21%), Positives = 82/187 (43%)
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM-VTCSKDRSIAVWDMVSP 344
++ + S D T++ WD +G ++ + L ++ + + + + +++ V+
Sbjct: 5 ILATASYDHTIKFWDPPSGGCYRSIDCGEFHINRLEITHDKLYIAAAGNPQTRLFE-VNT 63
Query: 345 NEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGI 400
N + GH+ V V F + K++ + S D T+K+W+ + C+ + +
Sbjct: 64 NNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNTV 123
Query: 401 ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVRC-IRFDAKRIVSGAYDG 457
L ++SG + +IR+WD+ C R L +G + I D +V+ G
Sbjct: 124 V-LHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKG 182
Query: 458 KIKVWNL 464
K VW L
Sbjct: 183 KCFVWRL 189
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 226 (84.6 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 62/200 (31%), Positives = 102/200 (51%)
Query: 283 DERVIISGSSDSTVRVW----DVNTGEMVNTLIHHCEAVLHLRFSNGM-----MVTCSKD 333
D + I + S D+ R+W ++ E H A+ + S +VT S D
Sbjct: 392 DGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTD 451
Query: 334 RSIAVWDMVS-PNEI--TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE 388
+I W + + PN I T H +N +D +++Y +AS D+ KVW T S E
Sbjct: 452 LTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGE 511
Query: 389 FVRTLNGHKRGIACLQ-YR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF- 445
+ L GHKRG+ + Y+ D+L+V+GS D TI++W + +C + LEGH V+ ++F
Sbjct: 512 TIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFF 571
Query: 446 --DAKRIVSGAYDGKIKVWN 463
+ +++S DG IK+W+
Sbjct: 572 NREHPQLLSCGADGLIKLWD 591
Score = 203 (76.5 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 59/212 (27%), Positives = 105/212 (49%)
Query: 272 GHTGSVLCL-----QYDERVIISGSSDSTVRVWDV-NT-GEMVNTLIH----HCEAVLHL 320
GH G++ + Q + + +++GS+D T++ W + NT +V T + H + + +
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 321 RFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA---VNVVDFDEKYIVSASG 375
S + T S D+ VW S I VL GH+ +N FD K IV+ SG
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGETIG---VLKGHKRGLWDINFYKFD-KLIVTGSG 540
Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRV 432
D+TIKVW+ +TL GH + +++ +R ++S +D I+LWD + G ++
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 433 LEGHEELVRC--IRFDAKRIVSGAYDGKIKVW 462
L+ H++ + ++ D + + DGK+ W
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 178 (67.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 74/329 (22%), Positives = 134/329 (40%)
Query: 115 DEKYIVSASGDRTIKVW--NTSSCEF--VRTLNGHKRGIACL-----QYRDRLVVSGSSD 165
D K+I +AS D ++W N +F GH I + Q + +V+GS+D
Sbjct: 392 DGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTD 451
Query: 166 NTIRY----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
TI+ IV +S + T D + + + + W+
Sbjct: 452 LTIKKWKIPNTPNSIVKTS-EYTRRAHD-KDINSIDVSPNDEYFATASYDKLGKVWQTDS 509
Query: 222 FLLQRINCRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC 279
+ I + +G++ + + D IV+G D TIKVW + C K L GHT SV
Sbjct: 510 G--ETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQR 567
Query: 280 LQYDERV---IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDR 334
+++ R ++S +D +++WD GE++ +L +H + + + L+ T D
Sbjct: 568 VKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADG 627
Query: 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
++ W + E+ + + + + YI + + T +R N
Sbjct: 628 KLSFWTDNTEEEVKFKELQAKEK--IEQEQSLSNYIKNKDWSNAFLLALTLD-HSMRLYN 684
Query: 395 GHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
K I + +D ++ S S +NTI L D
Sbjct: 685 VIKSSIETNEDKDSIIGSFSLENTISLLD 713
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHH----CEAVLHLRFSNGMMVTCSKDR--SIAVWDMVS 343
G SD + VWD+ G + ++L H C H ++ S D ++ +WD+V
Sbjct: 119 GGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVK 178
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKR--- 398
I L H AV V FD+ +S D + ++NT + + + T +++
Sbjct: 179 RRCI---HTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEA 235
Query: 399 -GIACLQYRDRLVVSGSSDNTIRLWDIECG 427
G L + +G S+N +++WDI+ G
Sbjct: 236 AGFVSLIDDRQYFYTGGSENVLKIWDIKSG 265
Score = 125 (49.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 327 MVTCSKDRSIAVWDMVSP-NEITLRRVLVGHRAAVNVVDFDE-----KYIVSASGDRTIK 380
+ T SKD +W + GH A+ + + K++V+ S D TIK
Sbjct: 396 IATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIK 455
Query: 381 VW---NTSSCEFVRTLN----GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR 431
W NT + V+T H + I + D + S D ++W + G +
Sbjct: 456 KWKIPNTPN-SIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIG 514
Query: 432 VLEGHEE-L--VRCIRFDAKRIVSGAYDGKIKVWNLV 465
VL+GH+ L + +FD K IV+G+ D IKVW+L+
Sbjct: 515 VLKGHKRGLWDINFYKFD-KLIVTGSGDKTIKVWSLL 550
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YR-DRLVVSGSSD 165
I + PN DE Y +AS D+ KVW T S E + L GHKRG+ + Y+ D+L+V+GS D
Sbjct: 484 IDVSPN-DE-YFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGD 541
Query: 166 NTIR 169
TI+
Sbjct: 542 KTIK 545
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 38/205 (18%), Positives = 86/205 (41%)
Query: 269 VLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGM 326
+ G T + + E ++ + ++ + + +++T E++ + E + +L +
Sbjct: 16 IYVGGTSASISTSNGELLLATPLNEDVI-ITNLDTNEIIYKIPGDGEVITNLTITPDGSY 74
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS 386
+ S+ + + ++D+ + I + + ++ VD D I VW+ +
Sbjct: 75 LAMISQSQLLRIFDLNKGSVI--KNFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIEN 132
Query: 387 CEFVRTLNGHKRGIACLQYRDRL------VVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
+L GH I L + L + SG + T+++WD+ C+ L+ H V
Sbjct: 133 GYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAV 192
Query: 441 RCIRFD--AKRIVSGAYDGKIKVWN 463
R + FD +SG D + ++N
Sbjct: 193 RGVGFDQDGDLFISGGRDNVVIIYN 217
Score = 115 (45.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLC-------LQYDERVIISGSSDSTVRVWDVN 302
G D I VWD + L GH G+ +C L + + SG + TV++WD+
Sbjct: 119 GGSDGVITVWDIENGYVTHSLKGH-GTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLV 177
Query: 303 TGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA- 359
++TL H AV + F +G + ++ +D + +++ + I + AA
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAG 237
Query: 360 -VNVVDFDEKYIVSASGDRTIKVWNTSSCEFV 390
V+++D D +Y + + +K+W+ S E +
Sbjct: 238 FVSLID-DRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 107 (42.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVR 297
L D ++ SG T+K+WD V +CI L H +V + +D+ + ISG D+ V
Sbjct: 155 LNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVI 214
Query: 298 VWDVNTGEMVNT--LIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVS 343
+++ + +NT + EA + L T + + +WD+ S
Sbjct: 215 IYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 97 (39.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW- 382
++ + ++ + D+ P E+ RV GH +N VD D K+I +AS D ++W
Sbjct: 353 LLAMATNSPALRIVDIEKPLEL---RVYEGHTDILNAVDVSTDGKWIATASKDNEARLWR 409
Query: 383 -NTSSCEF--VRTLNGHKRGIACL-----QYRDRLVVSGSSDNTIRLWDI 424
N +F GH I + Q + +V+GS+D TI+ W I
Sbjct: 410 WNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKI 459
Score = 79 (32.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH----TGSVLCLQYDERVIISGSSDSTVRV 298
D +SG RDN + +++ + + I + + L D + +G S++ +++
Sbjct: 200 DGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKI 259
Query: 299 WDVNTGEMV 307
WD+ +GEM+
Sbjct: 260 WDIKSGEMI 268
Score = 77 (32.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 390 VRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF- 445
V+ + G++ IA ++Y L+ ++ +R+ DIE LRV EGH +++ +
Sbjct: 331 VKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVS 390
Query: 446 -DAKRIVSGAYDGKIKVW 462
D K I + + D + ++W
Sbjct: 391 TDGKWIATASKDNEARLW 408
Score = 69 (29.3 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 122 ASGDR--TIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTI 168
ASGD T+K+W+ + TL H RG+ Q D L +SG DN +
Sbjct: 163 ASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGD-LFISGGRDNVV 213
Score = 56 (24.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 95 INTY-LKPMLQR-DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV 139
INT+ + ++ F+SL+ D +Y + + +K+W+ S E +
Sbjct: 224 INTFPINEQIEAAGFVSLID--DRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 49 (22.3 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 20/85 (23%), Positives = 33/85 (38%)
Query: 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN 166
+IS + + + S D I VW+ + +L GH I L + L S D
Sbjct: 105 YISSVDSTSSLFAFGGS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGEL---NSQD- 159
Query: 167 TIRYRDEFQIVSSSHDDTILIWDFL 191
+++ S T+ IWD +
Sbjct: 160 -------WRLASGDTMGTVKIWDLV 177
Score = 39 (18.8 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR----GIACLQYRDRLVVSGSSDNTIRY 170
D +S D + ++NT + + + T +++ G L + +G S+N ++
Sbjct: 200 DGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKI 259
Query: 171 RD 172
D
Sbjct: 260 WD 261
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 226 (84.6 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 62/200 (31%), Positives = 102/200 (51%)
Query: 283 DERVIISGSSDSTVRVW----DVNTGEMVNTLIHHCEAVLHLRFSNGM-----MVTCSKD 333
D + I + S D+ R+W ++ E H A+ + S +VT S D
Sbjct: 392 DGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTD 451
Query: 334 RSIAVWDMVS-PNEI--TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE 388
+I W + + PN I T H +N +D +++Y +AS D+ KVW T S E
Sbjct: 452 LTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGE 511
Query: 389 FVRTLNGHKRGIACLQ-YR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF- 445
+ L GHKRG+ + Y+ D+L+V+GS D TI++W + +C + LEGH V+ ++F
Sbjct: 512 TIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFF 571
Query: 446 --DAKRIVSGAYDGKIKVWN 463
+ +++S DG IK+W+
Sbjct: 572 NREHPQLLSCGADGLIKLWD 591
Score = 203 (76.5 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 59/212 (27%), Positives = 105/212 (49%)
Query: 272 GHTGSVLCL-----QYDERVIISGSSDSTVRVWDV-NT-GEMVNTLIH----HCEAVLHL 320
GH G++ + Q + + +++GS+D T++ W + NT +V T + H + + +
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 321 RFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA---VNVVDFDEKYIVSASG 375
S + T S D+ VW S I VL GH+ +N FD K IV+ SG
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGETIG---VLKGHKRGLWDINFYKFD-KLIVTGSG 540
Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRV 432
D+TIKVW+ +TL GH + +++ +R ++S +D I+LWD + G ++
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 433 LEGHEELVRC--IRFDAKRIVSGAYDGKIKVW 462
L+ H++ + ++ D + + DGK+ W
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 178 (67.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 74/329 (22%), Positives = 134/329 (40%)
Query: 115 DEKYIVSASGDRTIKVW--NTSSCEF--VRTLNGHKRGIACL-----QYRDRLVVSGSSD 165
D K+I +AS D ++W N +F GH I + Q + +V+GS+D
Sbjct: 392 DGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTD 451
Query: 166 NTIRY----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGK 221
TI+ IV +S + T D + + + + W+
Sbjct: 452 LTIKKWKIPNTPNSIVKTS-EYTRRAHD-KDINSIDVSPNDEYFATASYDKLGKVWQTDS 509
Query: 222 FLLQRINCRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC 279
+ I + +G++ + + D IV+G D TIKVW + C K L GHT SV
Sbjct: 510 G--ETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQR 567
Query: 280 LQYDERV---IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDR 334
+++ R ++S +D +++WD GE++ +L +H + + + L+ T D
Sbjct: 568 VKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADG 627
Query: 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
++ W + E+ + + + + YI + + T +R N
Sbjct: 628 KLSFWTDNTEEEVKFKELQAKEK--IEQEQSLSNYIKNKDWSNAFLLALTLD-HSMRLYN 684
Query: 395 GHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
K I + +D ++ S S +NTI L D
Sbjct: 685 VIKSSIETNEDKDSIIGSFSLENTISLLD 713
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHH----CEAVLHLRFSNGMMVTCSKDR--SIAVWDMVS 343
G SD + VWD+ G + ++L H C H ++ S D ++ +WD+V
Sbjct: 119 GGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVK 178
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKR--- 398
I L H AV V FD+ +S D + ++NT + + + T +++
Sbjct: 179 RRCI---HTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEA 235
Query: 399 -GIACLQYRDRLVVSGSSDNTIRLWDIECG 427
G L + +G S+N +++WDI+ G
Sbjct: 236 AGFVSLIDDRQYFYTGGSENVLKIWDIKSG 265
Score = 125 (49.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 327 MVTCSKDRSIAVWDMVSP-NEITLRRVLVGHRAAVNVVDFDE-----KYIVSASGDRTIK 380
+ T SKD +W + GH A+ + + K++V+ S D TIK
Sbjct: 396 IATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIK 455
Query: 381 VW---NTSSCEFVRTLN----GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR 431
W NT + V+T H + I + D + S D ++W + G +
Sbjct: 456 KWKIPNTPN-SIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIG 514
Query: 432 VLEGHEE-L--VRCIRFDAKRIVSGAYDGKIKVWNLV 465
VL+GH+ L + +FD K IV+G+ D IKVW+L+
Sbjct: 515 VLKGHKRGLWDINFYKFD-KLIVTGSGDKTIKVWSLL 550
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-YR-DRLVVSGSSD 165
I + PN DE Y +AS D+ KVW T S E + L GHKRG+ + Y+ D+L+V+GS D
Sbjct: 484 IDVSPN-DE-YFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGD 541
Query: 166 NTIR 169
TI+
Sbjct: 542 KTIK 545
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 38/205 (18%), Positives = 86/205 (41%)
Query: 269 VLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGM 326
+ G T + + E ++ + ++ + + +++T E++ + E + +L +
Sbjct: 16 IYVGGTSASISTSNGELLLATPLNEDVI-ITNLDTNEIIYKIPGDGEVITNLTITPDGSY 74
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS 386
+ S+ + + ++D+ + I + + ++ VD D I VW+ +
Sbjct: 75 LAMISQSQLLRIFDLNKGSVI--KNFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIEN 132
Query: 387 CEFVRTLNGHKRGIACLQYRDRL------VVSGSSDNTIRLWDIECGACLRVLEGHEELV 440
+L GH I L + L + SG + T+++WD+ C+ L+ H V
Sbjct: 133 GYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAV 192
Query: 441 RCIRFD--AKRIVSGAYDGKIKVWN 463
R + FD +SG D + ++N
Sbjct: 193 RGVGFDQDGDLFISGGRDNVVIIYN 217
Score = 115 (45.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLC-------LQYDERVIISGSSDSTVRVWDVN 302
G D I VWD + L GH G+ +C L + + SG + TV++WD+
Sbjct: 119 GGSDGVITVWDIENGYVTHSLKGH-GTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLV 177
Query: 303 TGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA- 359
++TL H AV + F +G + ++ +D + +++ + I + AA
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAG 237
Query: 360 -VNVVDFDEKYIVSASGDRTIKVWNTSSCEFV 390
V+++D D +Y + + +K+W+ S E +
Sbjct: 238 FVSLID-DRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 107 (42.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVR 297
L D ++ SG T+K+WD V +CI L H +V + +D+ + ISG D+ V
Sbjct: 155 LNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVI 214
Query: 298 VWDVNTGEMVNT--LIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVS 343
+++ + +NT + EA + L T + + +WD+ S
Sbjct: 215 IYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 97 (39.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW- 382
++ + ++ + D+ P E+ RV GH +N VD D K+I +AS D ++W
Sbjct: 353 LLAMATNSPALRIVDIEKPLEL---RVYEGHTDILNAVDVSTDGKWIATASKDNEARLWR 409
Query: 383 -NTSSCEF--VRTLNGHKRGIACL-----QYRDRLVVSGSSDNTIRLWDI 424
N +F GH I + Q + +V+GS+D TI+ W I
Sbjct: 410 WNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKI 459
Score = 79 (32.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH----TGSVLCLQYDERVIISGSSDSTVRV 298
D +SG RDN + +++ + + I + + L D + +G S++ +++
Sbjct: 200 DGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKI 259
Query: 299 WDVNTGEMV 307
WD+ +GEM+
Sbjct: 260 WDIKSGEMI 268
Score = 77 (32.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 390 VRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF- 445
V+ + G++ IA ++Y L+ ++ +R+ DIE LRV EGH +++ +
Sbjct: 331 VKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVS 390
Query: 446 -DAKRIVSGAYDGKIKVW 462
D K I + + D + ++W
Sbjct: 391 TDGKWIATASKDNEARLW 408
Score = 69 (29.3 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 122 ASGDR--TIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTI 168
ASGD T+K+W+ + TL H RG+ Q D L +SG DN +
Sbjct: 163 ASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGD-LFISGGRDNVV 213
Score = 56 (24.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 95 INTY-LKPMLQR-DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV 139
INT+ + ++ F+SL+ D +Y + + +K+W+ S E +
Sbjct: 224 INTFPINEQIEAAGFVSLID--DRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 49 (22.3 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 20/85 (23%), Positives = 33/85 (38%)
Query: 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN 166
+IS + + + S D I VW+ + +L GH I L + L S D
Sbjct: 105 YISSVDSTSSLFAFGGS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGEL---NSQD- 159
Query: 167 TIRYRDEFQIVSSSHDDTILIWDFL 191
+++ S T+ IWD +
Sbjct: 160 -------WRLASGDTMGTVKIWDLV 177
Score = 39 (18.8 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR----GIACLQYRDRLVVSGSSDNTIRY 170
D +S D + ++NT + + + T +++ G L + +G S+N ++
Sbjct: 200 DGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKI 259
Query: 171 RD 172
D
Sbjct: 260 WD 261
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 230 (86.0 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 71/240 (29%), Positives = 113/240 (47%)
Query: 241 QYDDHKIVSGLRDNTIKVW----DRVSLQCI-KVLTGHTGSV--LCLQYDERVIISGSSD 293
Q+ D I+S RD TI +W D + + L GH+ V + + D + +SGS D
Sbjct: 26 QFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
T+R+WD+ TG + H + VL + FS N +V+ S+D++I +W+ + + T++
Sbjct: 85 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQD 144
Query: 352 VLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V+ V F IVS D+ +KVWN ++C+ GH + +
Sbjct: 145 D--SHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG-KIKVWNL 464
L SG D LWD+ G L L+G + + + F R A G IK+W+L
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDT-INALCFSPNRYWLCAATGPSIKIWDL 261
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 64/245 (26%), Positives = 116/245 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D +SG D T+++WD + + GHT VL + + D R I+SGS D T+++W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 301 VNTGEMVNTLIH--HCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
G T+ H E V +RFS N ++V+C D+ + VW++ + L+ +
Sbjct: 134 T-LGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN---CKLKTNHI 189
Query: 355 GHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVS 412
GH +N V + ASG D +W+ + + + TL+G A +R +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALCFSPNRYWLC 249
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELV---------RCIRF----DAKRIVSGAYDGKI 459
++ +I++WD+E G + V E ++++ +C D + + +G D I
Sbjct: 250 AATGPSIKIWDLE-GKII-VDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLI 307
Query: 460 KVWNL 464
+VW +
Sbjct: 308 RVWQV 312
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 59/248 (23%), Positives = 106/248 (42%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIA--CLQYRDRLVV 160
I+ P F + I+SAS D+TI +W + E R L GH ++ + + +
Sbjct: 21 IATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMG 220
SGS D T+R D +++ D L+ + + + N +
Sbjct: 80 SGSWDGTLRLWD-LTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVC 138
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVSLQCIKVLTGHTG- 275
K+ +Q +++ V C+++ + IVS D +KVW+ + + GHTG
Sbjct: 139 KYTIQD----DSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGY 194
Query: 276 -SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKD 333
+ + + D + SG D +WD+N G+ + TL + + L FS N + +
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDTINALCFSPNRYWLCAATG 253
Query: 334 RSIAVWDM 341
SI +WD+
Sbjct: 254 PSIKIWDL 261
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/205 (25%), Positives = 91/205 (44%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQYDER----VIISGSSDSTV 296
D+ +IVSG RD TIK+W+ + + C + HT V C+++ +I+S D V
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGV-CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMV 174
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
+VW++ ++ I H + + S + + KD +WD+ NE L
Sbjct: 175 KVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYTLD 231
Query: 355 GHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSS---CEFVR----TLNGHKRGIACLQYR 406
G +N + F +Y + A+ +IK+W+ + +R T N C
Sbjct: 232 GGDT-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLA 290
Query: 407 ---D-RLVVSGSSDNTIRLWDIECG 427
D + + +G +DN IR+W + G
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQVTIG 315
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 225 (84.3 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 57/226 (25%), Positives = 108/226 (47%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
+ S RD T+++W HT V + + D + + + S D +++VW++
Sbjct: 75 LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQ 134
Query: 305 EMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ +L H V +FS +G ++V+CS+D++I +WD + + VG N
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF---ANF 191
Query: 363 VDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT 418
VDF+ I SA D T+K+W+ + ++ H G+ C+ + +++ SSD T
Sbjct: 192 VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGT 251
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
+++ D+ G + L+GH V + F + SG D ++ +W
Sbjct: 252 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 202 (76.2 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
D + + D +IKVW+ + + L HT V C ++ D R+I+S S D T+++WD
Sbjct: 113 DGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 301 VNTGEMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+ VN + F+ NG + + D ++ +WD + N++ L+ V H
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD-IRVNKL-LQHYQV-HSG 229
Query: 359 AVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGS 414
VN V F YI++AS D T+K+ + + TL GH + + + L SG
Sbjct: 230 GVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGG 289
Query: 415 SDNTIRLW 422
+D + LW
Sbjct: 290 ADTQVLLW 297
Score = 200 (75.5 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 50/203 (24%), Positives = 95/203 (46%)
Query: 272 GHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMM 327
GH ++ + + + + + S D+ + +W+ + H + V ++FS ++
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+DR++ +W P++ H A V VDF D +++ +AS D++IKVWN
Sbjct: 76 ASASRDRTVRLW---IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMY 132
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
F+ +L H + C ++ RL+VS S D TI++WD C+ +
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV 192
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F+ I S D +K+W++
Sbjct: 193 DFNPNGTCIASAGSDHTVKIWDI 215
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 253 DNTIKVWD-RVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNT 309
D + +W+ + + + + GH V +Q+ ++ S S D TVR+W + +
Sbjct: 39 DTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSE 97
Query: 310 LIHHCEAVLHLRFS-NGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-- 365
H V + FS +G + T S+D+SI VW+M + L H V F
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYS---LYRHTHWVRCAKFSP 154
Query: 366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWD 423
D + IVS S D+TIK+W+T++ + V + + + + S SD+T+++WD
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD 214
Query: 424 IECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465
I L+ + H V C+ F I++ + DG +K+ +L+
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLL 258
Score = 173 (66.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 56/198 (28%), Positives = 96/198 (48%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D +++ +AS D++IKVWN F+ +L H + C ++ RL+VS S D TI+ D
Sbjct: 113 DGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 173 EF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRIN 228
Q V++ D++ +F++++ P I W R+ K LLQ
Sbjct: 173 TTNKQCVNN-FSDSVGFANFVDFN--PNGTCIASAGSDHTVKI---WDIRVNK-LLQHYQ 225
Query: 229 CRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE-- 284
+S GV C+ + + I++ D T+K+ D + + I L GHTG V + + +
Sbjct: 226 V---HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 282
Query: 285 RVIISGSSDSTVRVWDVN 302
+ SG +D+ V +W N
Sbjct: 283 ELFSSGGADTQVLLWRTN 300
Score = 144 (55.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 349 LRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
L R GH+AA+ VDF K + +AS D + +WN GHK + +Q+
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 407 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
L+ S S D T+RLW + + H VR + F D + + + + D IKVW
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 463 NL 464
N+
Sbjct: 130 NM 131
Score = 129 (50.5 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSS 292
V C ++ D IVS D TIK+WD + QC+ + G + ++ I S S
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGS 206
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRR 351
D TV++WD+ +++ H V + F +G + + S ++ E L
Sbjct: 207 DHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITAS--SDGTLKILDLLEGRLIY 264
Query: 352 VLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
L GH V V F + + +SG D + +W T+ +++ + KR + L +
Sbjct: 265 TLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNF-DYLNCKDMIKRNLKRLHF 319
Score = 61 (26.5 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIR 169
K + +AS D + +WN GHK + +Q+ L+ S S D T+R
Sbjct: 31 KQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVR 85
Score = 48 (22.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDNTIR----YRD 172
+ SAS DRT+++W H + + + D + + + S D +I+ YR
Sbjct: 75 LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQ 134
Query: 173 EF 174
F
Sbjct: 135 RF 136
>UNIPROTKB|F1NIY8 [details] [associations]
symbol:F1NIY8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00550000075093 OMA:AAKDCTI EMBL:AADN02052957
EMBL:AADN02052958 IPI:IPI00601574 ProteinModelPortal:F1NIY8
Ensembl:ENSGALT00000002170 Uniprot:F1NIY8
Length = 364
Score = 238 (88.8 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 68/218 (31%), Positives = 110/218 (50%)
Query: 267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-----------IHH 313
I+VL GH SV CL D++ I S + D +V W+V +G+ + + + H
Sbjct: 82 IRVLRGHQHSVTCLVVSPDDKFIFSAAKDGSVIKWEVESGKKLCVVPGGKKSTEGQPMGH 141
Query: 314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-KY- 369
VL + S+ + T +++ I +W+ + + GHR AV+ + F + Y
Sbjct: 142 TAHVLCIAISSDGKYLATGDRNKLILIWEAATCKRLY---TFTGHRDAVSGLSFRKGTYQ 198
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 427
+ SAS DR++KVWN +V TL GH+ I + R+ V SG D T+R W I
Sbjct: 199 LYSASHDRSVKVWNVEENAYVETLFGHQDVITGMDSLSRECCVTSGGRDGTVRFWKIPEE 258
Query: 428 ACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNL 464
+ L + GH+ + CI+ + + +VSGA DG + +W L
Sbjct: 259 SQL-IFYGHQGSIDCIQLINEEHMVSGADDGSVALWGL 295
Score = 184 (69.8 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 59/208 (28%), Positives = 96/208 (46%)
Query: 237 VYCLQY--DDHKIVSGLRDNTIKVWDRVSLQ--CI----KVLT-----GHTGSVLCLQY- 282
V CL DD I S +D ++ W+ S + C+ K T GHT VLC+
Sbjct: 92 VTCLVVSPDDKFIFSAAKDGSVIKWEVESGKKLCVVPGGKKSTEGQPMGHTAHVLCIAIS 151
Query: 283 -DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVW 339
D + + +G + + +W+ T + + T H +AV L F G + + S DRS+ VW
Sbjct: 152 SDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKGTYQLYSASHDRSVKVW 211
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVD-FDEKYIVSASG-DRTIKVWNTSSCEFVRTLNGHK 397
+ V N L GH+ + +D + V++ G D T++ W E GH+
Sbjct: 212 N-VEENAYV--ETLFGHQDVITGMDSLSRECCVTSGGRDGTVRFWKIPE-ESQLIFYGHQ 267
Query: 398 RGIACLQY-RDRLVVSGSSDNTIRLWDI 424
I C+Q + +VSG+ D ++ LW +
Sbjct: 268 GSIDCIQLINEEHMVSGADDGSVALWGL 295
Score = 160 (61.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 55/219 (25%), Positives = 101/219 (46%)
Query: 237 VYCLQYD-DHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSS 292
V C+ D K + +G R+ I +W+ + + + TGH +V L + + + S S
Sbjct: 145 VLCIAISSDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKGTYQLYSASH 204
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHL-RFSNGMMVTCS-KDRSIAVWDMVSPNEITLR 350
D +V+VW+V V TL H + + + S VT +D ++ W + P E L
Sbjct: 205 DRSVKVWNVEENAYVETLFGHQDVITGMDSLSRECCVTSGGRDGTVRFWKI--PEESQL- 261
Query: 351 RVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE---FVRTLNGHKRGIACLQ-- 404
+ GH+ +++ + +E+++VS + D ++ +W + + VR +G + LQ
Sbjct: 262 -IFYGHQGSIDCIQLINEEHMVSGADDGSVALWGLAKKKPLALVRQSHGTQGSAQDLQQP 320
Query: 405 Y---------RDRLVVSGSSDNTIRLWDIECGACLRVLE 434
Y LV +GS ++LW +CG + LE
Sbjct: 321 YWVSAVAALLNSDLVATGSHSGCVKLW--KCGEGFQKLE 357
Score = 154 (59.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 271 TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMV 328
T H + + D + + +G + + +W+ T + + T H +AV L F G +
Sbjct: 142 TAHV-LCIAISSDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKGTYQLY 200
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD-FDEKYIVSASG-DRTIKVWNTSS 386
+ S DRS+ VW+ V N L GH+ + +D + V++ G D T++ W
Sbjct: 201 SASHDRSVKVWN-VEENAYV--ETLFGHQDVITGMDSLSRECCVTSGGRDGTVRFWKIPE 257
Query: 387 CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVL-EGH------EE 438
E GH+ I C+Q + +VSG+ D ++ LW + L ++ + H ++
Sbjct: 258 -ESQLIFYGHQGSIDCIQLINEEHMVSGADDGSVALWGLAKKKPLALVRQSHGTQGSAQD 316
Query: 439 L-----VRCIR--FDAKRIVSGAYDGKIKVW 462
L V + ++ + +G++ G +K+W
Sbjct: 317 LQQPYWVSAVAALLNSDLVATGSHSGCVKLW 347
Score = 53 (23.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 139 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 168
+R L GH+ + CL D+ + S + D ++
Sbjct: 82 IRVLRGHQHSVTCLVVSPDDKFIFSAAKDGSV 113
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 239 (89.2 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 66/251 (26%), Positives = 108/251 (43%)
Query: 233 NSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VII 288
++K V L + D + G D ++W L H G + L+++++ I+
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKKGNYIL 292
Query: 289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM-MVTCSKDRSIAVWDMVSPNEI 347
S D T +WD +TGE H L + + N +C D I V + +
Sbjct: 293 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCGTDMCIHVCRLGCDLPV 352
Query: 348 TLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GH VN + +D + S S D T+K+W+ V L H + I +++
Sbjct: 353 ---KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 409
Query: 406 RDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS 452
++ S S D+T+RLWD+E G C L H+E V I F D K + S
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLAS 469
Query: 453 GAYDGKIKVWN 463
G++D + +WN
Sbjct: 470 GSFDKCVHIWN 480
Score = 151 (58.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 267 IKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS- 323
+K GHT V +++D ++ S S D T+++W + V+ L H + + +++S
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 411
Query: 324 --------NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
N M+ + S D ++ +WD V T L H+ V + F D KY+
Sbjct: 412 TGPATSNPNSSIMLASASFDSTVRLWD-VEQGVCT--HTLTKHQEPVYSIAFSPDGKYLA 468
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDI 424
S S D+ + +WNT S V + G GI C R V + +SD ++ + D+
Sbjct: 469 SGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 138 (53.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 43/199 (21%), Positives = 89/199 (44%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
D ++ GS D R+W N G + +TL H + L+++ +++ D++ +WD
Sbjct: 246 DGTLLAMGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 304
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG-DRTIKVWNTSSCEF-VRTLNGHKR 398
E ++ H A VD+ ++ G D I V C+ V+T GH
Sbjct: 305 -AHTGEA--KQQFPFHSAPALDVDWQNNTTFASCGTDMCIHVCRLG-CDLPVKTFQGHTN 360
Query: 399 GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK-------- 448
+ +++ L+ S S D T+++W ++ AC+ L+ H + + I++
Sbjct: 361 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPN 420
Query: 449 ---RIVSGAYDGKIKVWNL 464
+ S ++D +++W++
Sbjct: 421 SSIMLASASFDSTVRLWDV 439
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 47/199 (23%), Positives = 87/199 (43%)
Query: 269 VLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVN---TGEMVNTLIHHC--------- 314
VL GH V ++ ++ SGS DST R+W++N G ++ HC
Sbjct: 174 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVP 233
Query: 315 --EAVLHLRF-SNGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-- 368
+ V L + S+G ++ S D +W + N L L H+ + + +++K
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIW---TENG-NLASTLGQHKGPIFALKWNKKGN 289
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLV-VSGSSDNTIRLWDIECG 427
YI+SA D+T +W+ + E + H + +++ S +D I + + C
Sbjct: 290 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCGTDMCIHVCRLGCD 349
Query: 428 ACLRVLEGHEELVRCIRFD 446
++ +GH V I++D
Sbjct: 350 LPVKTFQGHTNEVNAIKWD 368
Score = 52 (23.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
+D SL N D + S D ++W T + TL HK I L++ + G+
Sbjct: 236 KDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKK----GN- 289
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWD 189
Y I+S+ D T +IWD
Sbjct: 290 -----Y-----ILSAGVDKTTIIWD 304
Score = 47 (21.6 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 119 IVSASGDRTIKVWN 132
+ S SGD T ++WN
Sbjct: 194 LASGSGDSTARIWN 207
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 118 YIVSASGDRTIKVWNTSSCE 137
YI+SA D+T +W+ + E
Sbjct: 290 YILSAGVDKTTIIWDAHTGE 309
Score = 38 (18.4 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 142 LNGHKRGIACLQYR--DRLVVSGSSDNTIR 169
L GH+ + + L+ SGS D+T R
Sbjct: 175 LRGHESEVFICAWNPVSDLLASGSGDSTAR 204
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 235 (87.8 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 64/186 (34%), Positives = 91/186 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
I+S D TI+VW+ S C+ VLTGH V+C Q+ E +++S S D TVRVWD++
Sbjct: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGL 167
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
N S G + S R I D+ + ++ VL GH VN
Sbjct: 168 RKKN-------------LSPGAVE--SDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 212
Query: 365 FDEKY--IVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT 418
F IVS + DR +K+W N S V T GH ++C + R L++S S D +
Sbjct: 213 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKS 272
Query: 419 IRLWDI 424
IR+WD+
Sbjct: 273 IRVWDM 278
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 65/252 (25%), Positives = 112/252 (44%)
Query: 223 LLQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
+L + +S KG L + + I++ L + I++WD I H G V +
Sbjct: 1 MLTKFETKSARVKG---LSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 57
Query: 281 QYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSI 336
+ ++ + +SG D ++VW+ + TL+ H + + F + +++ S D++I
Sbjct: 58 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
VW+ S + VL GH V F E +VSAS D+T++VW+ S +R N
Sbjct: 118 RVWNWQSRTCVC---VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG---LRKKN 171
Query: 395 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVS 452
+ D ++G + L+ VLEGH+ V F IVS
Sbjct: 172 LSPGAVES----DVRGITG-----VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVS 222
Query: 453 GAYDGKIKVWNL 464
GA D ++K+W +
Sbjct: 223 GADDRQVKIWRM 234
Score = 115 (45.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
+I+SAS D+TI+VWN S V L GH + C Q+ + LVVS S D T+R D
Sbjct: 107 WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Score = 98 (39.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQYDER--VIISGSSDSTVRVWDVN 302
IVSG D +K+W + +V T GH +V C + R +I+S S D ++RVWD++
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Query: 303 TGEMVNT 309
V T
Sbjct: 280 KRTGVQT 286
Score = 62 (26.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 169
VS D IKVWN + TL GH I + ++S S D TIR
Sbjct: 67 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
Score = 47 (21.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIR 169
+I+++ + I++W+ C + + H + + + + L VSG D I+
Sbjct: 23 WILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIK 76
Score = 40 (19.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 176 IVSSSHDDTILIWDF 190
I++S H+ I +WD+
Sbjct: 24 ILTSLHNGVIQLWDY 38
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 247 (92.0 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 267 IKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF- 322
++ H+ +V CL+ RV+++G D V +W + + +L H + + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 323 -SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDFDEKYIVSASGDRT 378
S G++ + +I +WD+ E + R L GHR+ +VN F E + S S D
Sbjct: 69 ASEGLVAAGAASGTIKLWDL---EEAKVVRTLTGHRSNCVSVNFHPFGE-FFASGSLDTN 124
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGH 436
+K+W+ + T GH RG+ L++ R +VSG DN +++WD+ G L + H
Sbjct: 125 LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 184
Query: 437 EELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
E ++ + F + +G+ D +K W+L
Sbjct: 185 EGKIQSLDFHPHEFLLATGSADKTVKFWDL 214
Score = 228 (85.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 50/152 (32%), Positives = 78/152 (51%)
Query: 321 RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRT 378
R S+ ++VT +D + +W + PN I L GH + ++ V FD E + + + T
Sbjct: 26 RKSSRVLVTGGEDHKVNLWAIGKPNAILS---LYGHSSGIDSVTFDASEGLVAAGAASGT 82
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGH 436
IK+W+ + VRTL GH+ + + SGS D +++WDI C+ +GH
Sbjct: 83 IKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 437 EELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
V +RF D + IVSG D +KVW+L A
Sbjct: 143 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTA 174
Score = 203 (76.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 56/224 (25%), Positives = 104/224 (46%)
Query: 215 NNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTG 272
N W +GK I +S G+ + +D + + +G TIK+WD + ++ LTG
Sbjct: 42 NLWAIGK--PNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG 99
Query: 273 HTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGM-MV 328
H + + + + SGS D+ +++WD+ ++T H V LRF+ +G +V
Sbjct: 100 HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIV 159
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSS 386
+ +D + VWD+ + L H + +DF E + + S D+T+K W+ +
Sbjct: 160 SGGEDNVVKVWDLTAGK---LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 216
Query: 387 CEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 426
E + + G+ CL + + V+ G ++ I W+ I C
Sbjct: 217 FELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWEPIRC 260
Score = 168 (64.2 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 56/240 (23%), Positives = 108/240 (45%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD-- 172
+ +V+ D + +W + +L GH GI + + + LV +G++ TI+ D
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE 89
Query: 173 EFQIVSS--SHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQR-INC 229
E ++V + H + +F + E ++ N ++ + I+
Sbjct: 90 EAKVVRTLTGHRSNCVSVNFHPFGE-----------FFASGSLDTNLKIWDIRKKGCIHT 138
Query: 230 RSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ER 285
+++GV L++ D IVSG DN +KVWD + + + H G + L + E
Sbjct: 139 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEF 198
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAV--WDMV 342
++ +GS+D TV+ WD+ T E++ + V L F+ +G V C S+ + W+ +
Sbjct: 199 LLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWEPI 258
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 61/228 (26%), Positives = 112/228 (49%)
Query: 247 IVSGLRDNTIKVW--DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN 302
+ S RD T+++W DR HT V + + D +++++ S D +++VW +
Sbjct: 75 LASASRDRTVRLWVLDRKGKS--SEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 303 TGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
+ +L H V +FS +G ++V+CS+D++I +WD + + VG
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF---A 189
Query: 361 NVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSD 416
N VDF+ I SA D +K+W+ + ++ H G+ CL + +V+ SSD
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
T+++ D+ G + L+GH V + F D + + SG D ++ +W
Sbjct: 250 GTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 58/204 (28%), Positives = 98/204 (48%)
Query: 272 GHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MM 327
GH V LQ+ + ++ S S D TVR+W ++ + H V + FS +G ++
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLL 117
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
VT S+D+SI VW M + L H V F D + IVS S D+TIK+W+T+
Sbjct: 118 VTASEDKSIKVWSMFRQRFLYS---LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 386 SCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+ + V + + + + S SD+ +++WDI L+ + H V C+
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCL 234
Query: 444 RFD--AKRIVSGAYDGKIKVWNLV 465
F +V+ + DG +K+ +L+
Sbjct: 235 SFHPLGNSLVTASSDGTVKMLDLI 258
Score = 196 (74.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 272 GHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMM 327
GH ++ + + I + S D+ + +W + + H + V L+FS ++
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+DR++ +W + + + + H A V VDF D + +V+AS D++IKVW+
Sbjct: 76 ASASRDRTVRLWVLDRKGKSSEFKA---HTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
F+ +L H + C ++ RL+VS S D TI++WD C+ +
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV 192
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F+ I S D +K+W++
Sbjct: 193 DFNPNGTCIASAGSDHAVKIWDI 215
Score = 183 (69.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 59/198 (29%), Positives = 97/198 (48%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRD 172
D + +V+AS D++IKVW+ F+ +L H + C ++ RL+VS S D TI+ D
Sbjct: 113 DGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 173 EF--QIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNW--RMGKFLLQRIN 228
Q V++ D++ +F++++ P I W RM K LLQ
Sbjct: 173 TTNKQCVNN-FSDSVGFANFVDFN--PNGTCIASAGSDHAVKI---WDIRMNK-LLQHYQ 225
Query: 229 CRSENSKGVYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE 284
+S GV CL + + +V+ D T+K+ D + + I L GHTG V + + D
Sbjct: 226 V---HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDG 282
Query: 285 RVIISGSSDSTVRVWDVN 302
++ SG +D+ V +W N
Sbjct: 283 ELLTSGGADAQVLIWRTN 300
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 69/284 (24%), Positives = 113/284 (39%)
Query: 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRY---- 170
K I +AS D + +W+ GHK + LQ+ + L+ S S D T+R
Sbjct: 31 KQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLD 90
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCR 230
R +H + DF + + W M F + +
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV--------WSM--FRQRFLYSL 140
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--V 286
++ V C ++ D IVS D TIK+WD + QC+ + G + ++
Sbjct: 141 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTC 200
Query: 287 IISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVS 343
I S SD V++WD+ +++ +H C V L F +VT S D ++ + D++
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQVHSC-GVNCLSFHPLGNSLVTASSDGTVKMLDLI- 258
Query: 344 PNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
E L L GH V V F D + + S D + +W T+
Sbjct: 259 --EGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTN 300
Score = 147 (56.8 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 349 LRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY- 405
L R GH+AA+ DF K I +AS D + +W+ GHK + LQ+
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 406 -RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
+ L+ S S D T+RLW ++ + H VR + F D + +V+ + D IKVW
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 463 NL 464
++
Sbjct: 130 SM 131
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 235 (87.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 64/186 (34%), Positives = 91/186 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
I+S D TI+VW+ S C+ VLTGH V+C Q+ E +++S S D TVRVWD++
Sbjct: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGL 167
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
N S G + S R I D+ + ++ VL GH VN
Sbjct: 168 RKKN-------------LSPGAVE--SDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 212
Query: 365 FDEKY--IVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT 418
F IVS + DR +K+W N S V T GH ++C + R L++S S D +
Sbjct: 213 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKS 272
Query: 419 IRLWDI 424
IR+WD+
Sbjct: 273 IRVWDM 278
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 65/252 (25%), Positives = 112/252 (44%)
Query: 223 LLQRINCRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
+L + +S KG L + + I++ L + I++WD I H G V +
Sbjct: 1 MLTKFETKSARVKG---LSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 57
Query: 281 QYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSI 336
+ ++ + +SG D ++VW+ + TL+ H + + F + +++ S D++I
Sbjct: 58 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
VW+ S + VL GH V F E +VSAS D+T++VW+ S +R N
Sbjct: 118 RVWNWQSRTCVC---VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG---LRKKN 171
Query: 395 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVS 452
+ D ++G + L+ VLEGH+ V F IVS
Sbjct: 172 LSPGAVES----DVRGITG-----VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVS 222
Query: 453 GAYDGKIKVWNL 464
GA D ++K+W +
Sbjct: 223 GADDRQVKIWRM 234
Score = 115 (45.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
+I+SAS D+TI+VWN S V L GH + C Q+ + LVVS S D T+R D
Sbjct: 107 WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Score = 98 (39.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQYDER--VIISGSSDSTVRVWDVN 302
IVSG D +K+W + +V T GH +V C + R +I+S S D ++RVWD++
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Query: 303 TGEMVNT 309
V T
Sbjct: 280 KRTGVQT 286
Score = 62 (26.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 169
VS D IKVWN + TL GH I + ++S S D TIR
Sbjct: 67 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 118
Score = 47 (21.6 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIR 169
+I+++ + I++W+ C + + H + + + + L VSG D I+
Sbjct: 23 WILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIK 76
Score = 40 (19.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 176 IVSSSHDDTILIWDF 190
I++S H+ I +WD+
Sbjct: 24 ILTSLHNGVIQLWDY 38
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 237 (88.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 272 GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MM 327
GH +V C+ + + + + SGS DS + VW + H +AV + FS +G ++
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385
+ S+D+++ +W E T+ R H A V V F D + V+AS D+TIKVW+T
Sbjct: 108 ASGSRDKTVRIWVPNIKGESTVFRA---HTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+F+ +L+ H + C ++ RL+VS S D T++LWD C+ H V +
Sbjct: 165 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 224
Query: 444 RFDAKR--IVSGAYDGKIKVWNL 464
F + + D +KVW++
Sbjct: 225 DFHPSGTCVAAAGMDNTVKVWDV 247
Score = 233 (87.1 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 63/239 (26%), Positives = 114/239 (47%)
Query: 237 VYCLQYDD--HKIVSGLRDNTIKVW-DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
V C+ + H + SG RD T+++W + + V HT +V + + D + ++ S
Sbjct: 95 VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTAS 153
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITL 349
D T++VW + + + +L H V +FS +G ++V+ S D+++ +WD S +
Sbjct: 154 DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV-- 211
Query: 350 RRVLVGHRAAVNVVDFDEK-YIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD 407
H V VDF V+A+G D T+KVW+ + ++ H + L +
Sbjct: 212 -HSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP 270
Query: 408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVW 462
+V+ SSD+T+++ D+ G L L GH+ + F + SG D ++ VW
Sbjct: 271 SGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 232 (86.7 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 77/297 (25%), Positives = 127/297 (42%)
Query: 105 RDFISLLP-NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVS 161
RD ++ + +F+ K + S S D + VW+ GHK + C+ + L+ S
Sbjct: 50 RDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLAS 109
Query: 162 GSSDNTIRY-----RDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXXIENN 216
GS D T+R + E V +H T+ F + ++ + + +
Sbjct: 110 GSRDKTVRIWVPNIKGE-STVFRAHTATVRSVHFCSDGQSFV-----TASDDKTIKVWST 163
Query: 217 WRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
R KFL S++ V C ++ D IVS D T+K+WD+ S +C+ H
Sbjct: 164 HRQ-KFLFSL----SQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 218
Query: 275 GSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTC 330
G V + + + + D+TV+VWDV T ++ H AV L F S +VT
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 278
Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTS 385
S D ++ + D++ E L L GH+ V F +Y S D + VW ++
Sbjct: 279 SSDSTLKILDLM---EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 332
Score = 219 (82.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 79/312 (25%), Positives = 136/312 (43%)
Query: 140 RTLNGHKRGIACLQYRDRL--VVSGSSDNTI---RYRDEFQIVS-SSHDDTILIWDFLNY 193
R GH+ + C+ + + + SGS D+ + + + + + H D + +N+
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC---VNF 100
Query: 194 SETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253
S + + N G+ + R + + S +C D V+ D
Sbjct: 101 SPSGHLLASGSRDKTVRIWVPNI--KGESTVFRAHTATVRSVH-FCS--DGQSFVTASDD 155
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
TIKVW + + L+ H V C ++ D R+I+S S D TV++WD + E V++
Sbjct: 156 KTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 215
Query: 312 HHCEAVLHLRFS-NGMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK- 368
H V ++ F +G V + D ++ VWD V + + L H AAVN + F
Sbjct: 216 EHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD-VRTHRLLQHYQL--HSAAVNALSFHPSG 272
Query: 369 -YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD-- 423
Y+V+AS D T+K+ + + TL+GH+ + + SG SD + +W
Sbjct: 273 NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 332
Query: 424 ---IECGACLRV 432
I+ G LRV
Sbjct: 333 FDVIDYGEVLRV 344
Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 43/130 (33%), Positives = 59/130 (45%)
Query: 341 MVSPNEI-TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397
M P E +L R GHR AV VDF + K + S S D + VW+ GHK
Sbjct: 33 MALPQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 92
Query: 398 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG 453
+ C+ + L+ SGS D T+R+W V H VR + F D + V+
Sbjct: 93 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 152
Query: 454 AYDGKIKVWN 463
+ D IKVW+
Sbjct: 153 SDDKTIKVWS 162
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 236 (88.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 72/246 (29%), Positives = 116/246 (47%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
I+S D TI++W+ S CI +LTGH+ V+C + E +I+S S D TVRVWD++
Sbjct: 110 ILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGL 169
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
M N A + + + + SI+ D+ + ++ VL GH VN
Sbjct: 170 RMKNA------APVSMSLEDQL---AQAHNSISN-DLFGSTDAIVKFVLEGHDRGVNWCA 219
Query: 365 FDEKY--IVSASGDRTIKVWN-TSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDNT 418
F I+SA DR +K+W T+S + V T GH ++C + L++S S D T
Sbjct: 220 FHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKT 279
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRFDAK-RIVSGAYDGKIKVWNLVAALDPRAPTTTL 477
IR+WD+ ++ + I K + + A+D + V+ L + P L
Sbjct: 280 IRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFKL----ERERPAHAL 335
Query: 478 CLRTLV 483
+ TL+
Sbjct: 336 NINTLL 341
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 68/254 (26%), Positives = 117/254 (46%)
Query: 223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY 282
+L + RS +KGV I++ L + I++WD + GH G V + +
Sbjct: 3 MLTKFESRSSRAKGV-AFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAF 61
Query: 283 D--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAV 338
+ + +SG D V VW+ + +++ +L H + V F + +++CS D++I +
Sbjct: 62 HPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRI 121
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
W+ S N I +L GH V F E IVSAS D+T++VW+ S +R N
Sbjct: 122 WNWQSRNCIA---ILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISG---LRMKNAA 175
Query: 397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDAKR--IVSG 453
+ D+L + +S + + A ++ VLEGH+ V F I+S
Sbjct: 176 P---VSMSLEDQLAQAHNSISNDLFGSTD--AIVKFVLEGHDRGVNWCAFHPTLPLILSA 230
Query: 454 AYDGKIKVWNLVAA 467
D +K+W + A+
Sbjct: 231 GDDRLVKLWRMTAS 244
Score = 106 (42.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 106 DFISLLPNFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVS 161
D++ + F +Y I+S S D+TI++WN S + L GH + C + + L+VS
Sbjct: 96 DYVRVC-TFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVS 154
Query: 162 GSSDNTIRYRD 172
S D T+R D
Sbjct: 155 ASLDQTVRVWD 165
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 47/221 (21%), Positives = 92/221 (41%)
Query: 217 WRMGKFLLQRIN-CRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGH 273
WRM ++ CR + V C + H+ I+S D TI+VWD ++
Sbjct: 239 WRMTASKAWEVDTCRG-HFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRD 297
Query: 274 TGSVLCLQYDERV-IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
+ ++ + + + DS V V+ + + L + +L++ +K
Sbjct: 298 NDRFWFITVHPKLNLFAAAHDSGVMVFKLERERPAHAL--NINTLLYV----------NK 345
Query: 333 DRSIAVWDMVSPNEITLRRVL-VGHR-AAVNVVDFD--EKY-IVSASGDRTI-KVWNTSS 386
++SI +D++ T+ V +G + ++ EK ++++S D + ++ N SS
Sbjct: 346 EKSIVSYDLLRAQSTTVASVKHLGSAWLPPRSLSYNPAEKVALLTSSADNGVYELVNVSS 405
Query: 387 CEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDNTIRLWDI 424
L + +G A R+R V SD TI + D+
Sbjct: 406 RSNSLPLKDNIKGPGDDAIFVARNRFAVFSRSDQTIEIKDL 446
Score = 61 (26.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDR-LVVSGSSDNTIR 169
VS D + VWN S + + +L GH + C + + ++S S D TIR
Sbjct: 69 VSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Score = 39 (18.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 176 IVSSSHDDTILIWDF 190
I++S H+ I +WD+
Sbjct: 26 ILTSLHNGRIQLWDY 40
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 235 (87.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 64/186 (34%), Positives = 91/186 (48%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304
I+S D TI+VW+ S C+ VLTGH V+C Q+ E +++S S D TVRVWD++
Sbjct: 98 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGL 157
Query: 305 EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364
N S G + S R I D+ + ++ VL GH VN
Sbjct: 158 RKKN-------------LSPGAVE--SDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 202
Query: 365 FDEKY--IVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT 418
F IVS + DR +K+W N S V T GH ++C + R L++S S D +
Sbjct: 203 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKS 262
Query: 419 IRLWDI 424
IR+WD+
Sbjct: 263 IRVWDM 268
Score = 169 (64.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 60/226 (26%), Positives = 101/226 (44%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTG 304
I+S L + I++W I H G V + + ++ + +SG D ++VW+
Sbjct: 14 ILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLR 73
Query: 305 EMVNTLIHHCEAVLHLRFSNGM--MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
+ TL+ H + + F + +++ S D++I VW+ S + VL GH V
Sbjct: 74 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVC---VLTGHNHYVMC 130
Query: 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 420
F E +VSAS D+T++VW+ S +R N + D ++G +
Sbjct: 131 AQFHPSEDLVVSASLDQTVRVWDISG---LRKKNLSPGAVES----DVRGITG-----VD 178
Query: 421 LWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWNL 464
L+ VLEGH+ V F IVSGA D ++K+W +
Sbjct: 179 LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRM 224
Score = 115 (45.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD 172
+I+SAS D+TI+VWN S V L GH + C Q+ + LVVS S D T+R D
Sbjct: 97 WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 153
Score = 98 (39.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQYDER--VIISGSSDSTVRVWDVN 302
IVSG D +K+W + +V T GH +V C + R +I+S S D ++RVWD++
Sbjct: 210 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 269
Query: 303 TGEMVNT 309
V T
Sbjct: 270 KRTGVQT 276
Score = 62 (26.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 169
VS D IKVWN + TL GH I + ++S S D TIR
Sbjct: 57 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 108
Score = 57 (25.1 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LV 159
ML+R +S P +I+S+ + I++W T C + + H + + + + L
Sbjct: 1 MLKR--LSFHPK--RPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLF 56
Query: 160 VSGSSDNTIR 169
VSG D I+
Sbjct: 57 VSGGDDYKIK 66
WARNING: HSPs involving 1355 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 486 473 0.00099 118 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1605
No. of states in DFA: 620 (66 KB)
Total size of DFA: 327 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.17u 0.15s 45.32t Elapsed: 00:00:03
Total cpu time: 45.35u 0.16s 45.51t Elapsed: 00:00:03
Start: Thu Aug 15 11:08:51 2013 End: Thu Aug 15 11:08:54 2013
WARNINGS ISSUED: 2