RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9182
(486 letters)
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 179 bits (453), Expect = 3e-53
Identities = 237/263 (90%), Positives = 252/263 (95%)
Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC 279
G+ LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTGHTGSVLC
Sbjct: 1 GRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC 60
Query: 280 LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVW 339
LQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSKDRSIAVW
Sbjct: 61 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 120
Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
DM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRG
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180
Query: 400 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI 459
IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVSGAYDGKI
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 240
Query: 460 KVWNLVAALDPRAPTTTLCLRTL 482
KVW+LVAALDPRAP TLCLRTL
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTL 263
Score = 131 bits (328), Expect = 3e-35
Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
+D++ IVS D TIK+W+ ++ E R L GH + CLQY +R+++ + ++
Sbjct: 23 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII---TGSSDSTVRV 79
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+ + + +T++ G ++ + L+R+
Sbjct: 80 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 139
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ V SG D TIKVW+ + + ++ L GH + CLQY +R+++SGSSD
Sbjct: 140 AVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 197
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------PNEI 347
+T+R+WD+ G + L H E V +RF N +V+ + D I VWD+V+ P
Sbjct: 198 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGT 257
Query: 348 TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
R LV H V + FDE IVS+S D TI +W+
Sbjct: 258 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293
Score = 118 bits (295), Expect = 1e-30
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 31/301 (10%)
Query: 139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYS 194
+ + +G+ CLQY D+ +VSG DNTI+ D E + + + H ++L +
Sbjct: 8 IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 67
Query: 195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254
S + +N + + V L++++ +V+ +D
Sbjct: 68 IITGS------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 115
Query: 255 TIKVWDRVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
+I VWD S I +VL GH +V + +D++ I+S S D T++VW+ +T E V TL
Sbjct: 116 SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 175
Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
H + L++ + ++V+ S D +I +WD+ + RVL GH V + FD K IV
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL---RVLEGHEELVRCIRFDNKRIV 232
Query: 372 SASGDRTIKVWNTSSCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 422
S + D IKVW+ + +RTL H + LQ+ + +VS S D+TI +W
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292
Query: 423 D 423
D
Sbjct: 293 D 293
Score = 85.3 bits (209), Expect = 5e-19
Identities = 86/197 (43%), Positives = 106/197 (53%), Gaps = 57/197 (28%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR
Sbjct: 145 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR--- 201
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSE 232
+WD +
Sbjct: 202 --------------LWDIECG-------------------------------ACLRVLEG 216
Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS---------LQCIKVLTGHTGSVLCLQYD 283
+ + V C+++D+ +IVSG D IKVWD V+ C++ L H+G V LQ+D
Sbjct: 217 HEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 276
Query: 284 ERVIISGSSDSTVRVWD 300
E I+S S D T+ +WD
Sbjct: 277 EFQIVSSSHDDTILIWD 293
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 146 bits (368), Expect = 2e-40
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 19/321 (5%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
F IVS S D T+KVW+ + + +RTL GH G+ Q RD + I +
Sbjct: 25 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--------NIIISGSTD 76
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+ + + I ++ T SG Q ++ +
Sbjct: 77 RTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH 136
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
V C+QYD ++VSG D +KVWD + C+ L GHT V LQ+D ++SGS D
Sbjct: 137 VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLD 196
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
+++RVWDV TG ++TL H + + ++V+ + D ++ +WD+ + + +
Sbjct: 197 TSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP 256
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-----GHKRGIACLQYRD- 407
H++AV + F++ +++++S D T+K+W+ + EF+R L G + ++ +
Sbjct: 257 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 316
Query: 408 -RLVVSGSSDNT----IRLWD 423
+ GS + T + + D
Sbjct: 317 KLVCAVGSRNGTEETKLLVLD 337
Score = 144 bits (363), Expect = 1e-39
Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 34/353 (9%)
Query: 131 WNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTI 185
W + + L GH + CLQ+ +VSGS DNT++ + H +
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH 245
SG + + I+ ++ V C+ +
Sbjct: 61 WSSQM------------RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 108
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE 305
++VSG RD T++VWD + QC+ VL GH +V C+QYD R ++SG+ D V+VWD T
Sbjct: 109 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET 168
Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
++TL H V L+F +V+ S D SI VWD+ + N I L GH++ + ++
Sbjct: 169 CLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGHQSLTSGMEL 225
Query: 366 DEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 422
+ +VS + D T+K+W+ + + + + N H+ + CLQ+ V++ S D T++LW
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
Query: 423 DIECGACLRVL-----EGHEELVRCIRF--DAKRIVSGAYDG----KIKVWNL 464
D++ G +R L G +V IR G+ +G K+ V +
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
Score = 81.0 bits (198), Expect = 2e-17
Identities = 61/326 (18%), Positives = 108/326 (33%), Gaps = 62/326 (19%)
Query: 29 ISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMC 88
+ S + + + + V
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 89 HYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 148
L ++ +D + +VS + D +KVW+ + + TL GH
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179
Query: 149 IACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPP 208
+ LQ+ VVSGS D +IR +WD
Sbjct: 180 VYSLQFDGIHVVSGSLDTSIR-----------------VWDVETG--------------- 207
Query: 209 SGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD---RVSLQ 265
I+ + + ++ D+ +VSG D+T+K+WD LQ
Sbjct: 208 ----------------NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQ 251
Query: 266 CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI-----HHCEAVLHL 320
++ H +V CLQ+++ +I+ S D TV++WD+ TGE + L+ V +
Sbjct: 252 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 311
Query: 321 RFSNGMMVTCS------KDRSIAVWD 340
R SN +V ++ + V D
Sbjct: 312 RASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 70.2 bits (170), Expect = 7e-14
Identities = 50/251 (19%), Positives = 93/251 (37%), Gaps = 56/251 (22%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
M + + D V M T L + FD ++VS
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSG 193
Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD 182
S D +I+VW+ + + TL GH+ + ++ +D ++VSG++D+T++
Sbjct: 194 SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK------------- 240
Query: 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY 242
IWD LQ + +++ V CLQ+
Sbjct: 241 ----IWDIKTG----------------------------QCLQTLQGPNKHQSAVTCLQF 268
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-----GHTGSVLCLQY--DERVIISGSSDST 295
+ + +++ D T+K+WD + + I+ L G G V ++ + V GS + T
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328
Query: 296 ----VRVWDVN 302
+ V D +
Sbjct: 329 EETKLLVLDFD 339
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 141 bits (355), Expect = 9e-39
Identities = 83/346 (23%), Positives = 142/346 (41%), Gaps = 42/346 (12%)
Query: 129 KVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD----EFQIVSSSHD 182
K W E L+GH+ + + + ++VS S D TI+ D +F+ H
Sbjct: 1 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY 242
D++ F + + S W F R +++ +
Sbjct: 60 DSVQDISFDHSGKLLAS--------CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 111
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
+ IVS RD TIK+W+ + C+K TGH V ++ D +I S S+D TVRVW
Sbjct: 112 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
V T E L H V + ++ + + + +
Sbjct: 172 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK---------------- 215
Query: 361 NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT 418
+++S S D+TIK+W+ S+ + TL GH + + + + ++S + D T
Sbjct: 216 -----PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 270
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
+R+WD + C++ L HE V + F A +V+G+ D +KVW
Sbjct: 271 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 115 bits (287), Expect = 3e-29
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 234 SKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS 291
V + + +VS D TIKVWD + + L GHT SV + +D + S
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEI 347
+ + + + H + +V+ S+D++I +W++ + +
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136
Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
+ GHR V +V D I S S D+T++VW ++ E L H+ + C+ +
Sbjct: 137 ---KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193
Query: 406 R----------------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
++SGS D TI++WD+ G CL L GH+ VR +
Sbjct: 194 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253
Query: 444 RF--DAKRIVSGAYDGKIKVWNL 464
F K I+S A D ++VW+
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDY 276
Score = 108 bits (270), Expect = 5e-27
Identities = 61/304 (20%), Positives = 102/304 (33%), Gaps = 34/304 (11%)
Query: 43 ILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
++D + FD + + + I T
Sbjct: 42 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 101
Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVV 160
+S++P + +IVSAS D+TIK+W + V+T GH+ + ++ L+
Sbjct: 102 HNVSSVSIMP--NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA 159
Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMG 220
S S+D T+R +
Sbjct: 160 SCSNDQTVRVWV--------VATKECKAEL------------------REHRHVVECISW 193
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
+ ++SG RD TIK+WD + C+ L GH V +
Sbjct: 194 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253
Query: 281 QY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSI 336
+ + I+S + D T+RVWD + TL H V L F +VT S D+++
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 337 AVWD 340
VW+
Sbjct: 314 KVWE 317
Score = 40.9 bits (94), Expect = 2e-04
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 431 RVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
L GH V + F +VS + D IKVW+
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY 46
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 115 bits (287), Expect = 3e-29
Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 12/278 (4%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDE 173
D + +VSAS D + +W++ + V + + Y V+ + I
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+ + + + Y SG + W +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
L D VSG D + K+WD C + TGH + + + + +GS
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 292 SDSTVRV--WDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI 347
D+T R+ + M + + + + FS +++ D + VWD + +
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
VL GH V+ + D + + S D +K+WN
Sbjct: 306 ---GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 114 bits (285), Expect = 7e-29
Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 12/294 (4%)
Query: 140 RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYR--DEFQIVSSSHDDTILIWDFLNYSE 195
RTL GH I + + RL+VS S D + V + + + Y+
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT-CAYAP 107
Query: 196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
+ GG + + + + L + SG
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
+ + L L D R+ +SG+ D++ ++WDV G T H
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 316 AVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
+ + F T S D + ++D+ + E+ + V F + ++
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELM-TYSHDNIICGITSVSFSKSGRLLL 286
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
+ D VW+ + L GH ++CL V +GS D+ +++W+
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 94.0 bits (232), Expect = 1e-21
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 10/213 (4%)
Query: 261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
R+ ++ + L GH + + + D R+++S S D + +WD T V+ + V+
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 319 HLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSAS 374
++ SI N R + D+ IV++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRV 432
GD T +W+ + + T GH + L RL VSG+ D + +LWD+ G C +
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 433 LEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
GHE + I F + +G+ D ++++
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 90.6 bits (223), Expect = 1e-20
Identities = 40/244 (16%), Positives = 72/244 (29%), Gaps = 52/244 (21%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
+ ++ + +QI + T D +SL D + VS
Sbjct: 143 TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRDEFQIVSSS 180
+ D + K+W+ +T GH+ I + + +GS D T R
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL---------- 252
Query: 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL 240
+ + G+ +
Sbjct: 253 ------------------------------------FDLRADQELMTYSHDNIICGITSV 276
Query: 241 QY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTV 296
+ +++G D VWD + VL GH V CL D + +GS DS +
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 297 RVWD 300
++W+
Sbjct: 337 KIWN 340
Score = 50.1 bits (118), Expect = 3e-07
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
D V ++ RR L GH A + + + D + +VSAS D + +W++ + V +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 397 KRGIACLQY 405
+ Y
Sbjct: 97 SSWVMTCAY 105
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 104 bits (260), Expect = 2e-25
Identities = 58/353 (16%), Positives = 125/353 (35%), Gaps = 23/353 (6%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
F++ Y+++ + D+ I+V+++ + +F+ L+GH G+ L+Y +
Sbjct: 21 FEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY--------AHGGI------ 66
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+VS S D T+ +WD T + G N + +
Sbjct: 67 --LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ + L +T + + VL GH SV + +++SGS D
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENP----YFVGVLRGHMASVRTVSGHGNIVVSGSYD 180
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
+T+ VWDV + + L H + + + + S + N + +
Sbjct: 181 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240
Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
+ D+ + +A+ + + I D ++VSG
Sbjct: 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG 300
Query: 414 SSDNTIRLWDIECGACLRV-LEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNL 464
S+N ++++ G + + + + + F K + + DG+ + L
Sbjct: 301 -SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL 352
Score = 72.6 bits (176), Expect = 2e-14
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
F+ QR R + + CLQ++D+ +++G D I+V+D ++ + + L+GH G V L+
Sbjct: 1 FVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 60
Query: 282 Y-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM----VTCSKDRSI 336
Y +++SGS+D TVRVWD+ G + H V L VT S+D ++
Sbjct: 61 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
VW + + + + + FV L GH
Sbjct: 121 HVWKLPKESSVPDHG--------------------EEHDYPLVFHTPEENPYFVGVLRGH 160
Query: 397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
+ + +VVSGS DNT+ +WD+ CL +L GH
Sbjct: 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 200
Score = 59.1 bits (141), Expect = 3e-10
Identities = 31/274 (11%), Positives = 82/274 (29%), Gaps = 21/274 (7%)
Query: 87 MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 146
+ + + + ++ + KYIV+ S D T+ VW V
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138
Query: 147 RGIACL------QYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQG 200
Y ++ + +VS S+D+T+++WD I
Sbjct: 139 DYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 198
Query: 201 GGGGGPPPSGPSIENNWRMGKFLLQRI------------NCRSENSKGVYCLQYDDHKIV 248
G + E + + I + + D +
Sbjct: 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS 258
Query: 249 SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMV- 307
+ + + + ++ + +++SG S++ ++++ +G++V
Sbjct: 259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVH 317
Query: 308 NTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWD 340
++ + + + F ++ KD +
Sbjct: 318 ANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 351
Score = 50.7 bits (119), Expect = 2e-07
Identities = 12/130 (9%), Positives = 29/130 (22%), Gaps = 17/130 (13%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
V + + + ++ + I+ +
Sbjct: 240 QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVS 299
Query: 123 SGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDEFQIVSSS 180
+ ++N S + V + I + + LV + D
Sbjct: 300 GSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSF----------- 348
Query: 181 HDDTILIWDF 190
+ I DF
Sbjct: 349 ----LEILDF 354
Score = 38.7 bits (88), Expect = 0.001
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 432 VLEGHE-ELVRCIRFDAKRIVSGAYDGKIKVWNL 464
L GH ++ C++F+ +++GA D I+V++
Sbjct: 7 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDS 40
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 104 bits (260), Expect = 3e-25
Identities = 72/341 (21%), Positives = 124/341 (36%), Gaps = 57/341 (16%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
D +Y+ + ++T +V+ S V L+ + +
Sbjct: 73 DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSS--------------- 116
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
S S D I F + G + + W + + I E
Sbjct: 117 ---SPSSDLYIRSVCFSPDGKFLATG--------AEDRLIRIWDIENRKIVMILQGHEQD 165
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSS 292
K+VSG D T+++WD + QC L+ G + I +GS
Sbjct: 166 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 225
Query: 293 DSTVRVWDVNTGEMVNTLIH-------HCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVS 343
D VRVWD TG +V L H ++V + F+ +V+ S DRS+ +W++ +
Sbjct: 226 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 285
Query: 344 PNEI---------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392
N T +GH+ V V +++YI+S S DR + W+ S +
Sbjct: 286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345
Query: 393 LNGHKRGIACLQYRD--------RLVVSGSSDNTIRLWDIE 425
L GH+ + + + + +GS D R+W +
Sbjct: 346 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 104 bits (259), Expect = 5e-25
Identities = 75/385 (19%), Positives = 141/385 (36%), Gaps = 69/385 (17%)
Query: 119 IVSASGDRTIKVWNTSS-----CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
+ + ++N + E ++L H + C+++ S+D
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSL-DHTSVVCCVKF--------SNDG------- 74
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+ +++ + T ++ + S + +
Sbjct: 75 -EYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPEN-------------LNTSSSPSS 120
Query: 234 SKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS 289
+ + + D + +G D I++WD + + + +L GH + L Y ++S
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI 347
GS D TVR+WD+ TG+ TL + S DR++ VWD + +
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 348 ----TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS------------SCEF 389
+ GH+ +V V F D + +VS S DR++K+WN S
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 390 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445
T GHK + + D ++SGS D + WD + G L +L+GH V +
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 360
Query: 446 ------DAKRIVSGAYDGKIKVWNL 464
+ +G+ D K ++W
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWKY 385
Score = 74.8 bits (182), Expect = 3e-15
Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 25/240 (10%)
Query: 87 MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNT--SSCEFVRTLNG 144
+ ++D SL +VS SGDRT+++W+ C ++
Sbjct: 146 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED 205
Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRD-----------EFQIVSSSHDDTILIWDFLNY 193
+A + + +GS D +R D + H D++ F
Sbjct: 206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 265
Query: 194 SETPIQGGGGG----GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS 249
++ + G + + ++ + ++ +D I+S
Sbjct: 266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS 325
Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--------DERVIISGSSDSTVRVWDV 301
G +D + WD+ S + +L GH SV+ + + V +GS D R+W
Sbjct: 326 GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 62.1 bits (149), Expect = 5e-11
Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 9/113 (7%)
Query: 78 DFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE 137
+ + + +S+ +++YI+S S DR + W+ S
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF 190
+ L GH+ + + + + + + S D IW +
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLG---------PEYNVFATGSGDCKARIWKY 385
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 91.3 bits (225), Expect = 8e-21
Identities = 31/366 (8%), Positives = 84/366 (22%), Gaps = 68/366 (18%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK----RGIACLQYRDRLVVSGSSDNTIRY 170
+Y++ + + V + +S ++ V + I
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230
D + + + + + G G S +
Sbjct: 67 I-----------DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE------------- 102
Query: 231 SENSKGVYCLQYDDHKI--VSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLCLQYDE 284
VY ++ ++ ++V+ K + ++ D
Sbjct: 103 ------VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342
+ ++G DV TG+ L S ++ +
Sbjct: 157 SLYVAGPDI---YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 213
Query: 343 SPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG--I 400
+ D++ +A + + +
Sbjct: 214 AR------------------FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYF 255
Query: 401 ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGK 458
L+ N + +D++ ++ + C+ F ++ G
Sbjct: 256 TGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND 314
Query: 459 IKVWNL 464
+ V+N
Sbjct: 315 LAVFNP 320
Score = 57.8 bits (138), Expect = 1e-09
Identities = 18/216 (8%), Positives = 46/216 (21%), Gaps = 23/216 (10%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRG----IACLQYRDRLVVSGSSDNTIRYRDE 173
++V++T+ + + + L V+G + +
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTG 173
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGG------------------PPPSGPSIEN 215
V+ +
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233
Query: 216 NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL-TGHT 274
+ + L+ N + +D + IK HT
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT 293
Query: 275 GSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
+ + G + + + V++ +T E V +
Sbjct: 294 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 90.3 bits (222), Expect = 3e-20
Identities = 50/392 (12%), Positives = 114/392 (29%), Gaps = 67/392 (17%)
Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
+ VS SGD +KVW+ + + + V +
Sbjct: 22 ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH--FVHKSGLHHVDVLQAIERDAFEL 79
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+ ++S +L + ET S + W +
Sbjct: 80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL-------------- 125
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ------------------CIKVLTGHTG 275
G + H++V+ T +W ++ +
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 276 SVLCLQY-DERVIISGSSDSTVRV------WDVNTGEMVNTLIHHCEAVLHLRFSNG--M 326
+ + +I +G ++ TV++ + E +++I++ ++ ++FS +
Sbjct: 186 FATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 245
Query: 327 MVTCSKDRSIAVWDM-------------VSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
+ S + V + H + V + F + +
Sbjct: 246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 305
Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE-CGACL 430
SA D ++ W+ + E + TLN H I + + G S ++D++
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 365
Query: 431 RVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
R G + + + D I+ +
Sbjct: 366 RSGMGAD--------LNESLCCVCLDRSIRWF 389
Score = 74.9 bits (182), Expect = 4e-15
Identities = 32/318 (10%), Positives = 80/318 (25%), Gaps = 74/318 (23%)
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD------RVSLQCIKVLTGHT 274
K + N + ++ + + VS D +KVWD H
Sbjct: 1 KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK 60
Query: 275 GSVLCL---------QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG 325
+ + ++ ++ + S + + + + +I +L
Sbjct: 61 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH 120
Query: 326 -----------------MMVTCSKDRSIAVWDMVSPNEIT---------------LRRVL 353
+V + +W + +
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Query: 354 VGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-------- 404
+ VD + I + + T+++ S+ + I
Sbjct: 181 MTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240
Query: 405 YRDRLVVSGSSDNTI---RLWDIECGACLRVLEGHEELVRCIRF---------------D 446
+ L+ N+ L++ E G + L +
Sbjct: 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 300
Query: 447 AKRIVSGAYDGKIKVWNL 464
+ + S +DGK++ W++
Sbjct: 301 GETLCSAGWDGKLRFWDV 318
Score = 61.8 bits (148), Expect = 6e-11
Identities = 36/273 (13%), Positives = 78/273 (28%), Gaps = 21/273 (7%)
Query: 117 KYIVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRYRDEF 174
+V+ T +W + +L + LQ ++ S ++ +
Sbjct: 137 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG 196
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
I + ++ T+ I + S + +++
Sbjct: 197 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS---IRSVKFSPQGSLLAIAHDSN 253
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS 292
Y+ S Q H+ V+ L + + S
Sbjct: 254 SFGCITLYETEFG----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 309
Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
D +R WDV T E + TL HC+ + + V+D ++ +
Sbjct: 310 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD--------VKFL 361
Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS 385
G R+ + + + DR+I+ + +
Sbjct: 362 KKGWRSGMG--ADLNESLCCVCLDRSIRWFREA 392
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 89.5 bits (220), Expect = 4e-20
Identities = 35/347 (10%), Positives = 92/347 (26%), Gaps = 37/347 (10%)
Query: 113 NFDEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 168
N D I + + ++ + V L H + + + +V+ +D
Sbjct: 16 NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 75
Query: 169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRIN 228
+ I S + +
Sbjct: 76 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 135
Query: 229 CRSENSKGVYCLQYDDHKIVSGL--RDNTIKVWDRVSLQ------------------CIK 268
+ V L + + ++ D +++ + +
Sbjct: 136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMF 195
Query: 269 VLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG 325
+ G V + + + S DSTV + D + V TL +L + F
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255
Query: 326 MMVTCSKDRSIAVWDM-VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNT 384
+V D ++ + +++ L + + + + D+ +
Sbjct: 256 SLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF--QNLDKKASSEGS 313
Query: 385 SSCEFVRTLNGHKRGIACL------QYRDRLVVSGSSDNTIRLWDIE 425
++ + HK ++ + + + + D + +WD+
Sbjct: 314 AAAG-AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 55.2 bits (131), Expect = 6e-09
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 13/172 (7%)
Query: 271 TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG--EMVNTLIHHCEAVLHLRFS--N 324
+ + C + D I ++ V +++ + V+ L H V + ++ +
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWN 383
+VTC DR+ VW + +L +RAA V +EK SG R I +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 384 TSSCEFVRTLNGHKRGI------ACLQYRDRLVVSGSSDNTIRLWDIECGAC 429
K+ I L+ +GS D R++
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175
Score = 46.4 bits (108), Expect = 5e-06
Identities = 31/235 (13%), Positives = 60/235 (25%), Gaps = 40/235 (17%)
Query: 71 WSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKV 130
+S + + + + + + + S D T+ +
Sbjct: 168 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL 227
Query: 131 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF 190
+ V TL + + E +V++ HD +++ +
Sbjct: 228 ADADKKMAVATLASE----------------TLPLLAVTFITESSLVAAGHDCFPVLFTY 271
Query: 191 LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250
+ GG P S +F SE S HK
Sbjct: 272 DS--AAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHK---- 325
Query: 251 LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE 305
N++ I VL+G + D + +WDV + E
Sbjct: 326 ---NSV--------SQISVLSGGKAKC-------SQFCTTGMDGGMSIWDVRSLE 362
Score = 29.1 bits (63), Expect = 1.2
Identities = 3/27 (11%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 440 VRCIRF--DAKRIVSGAYDGKIKVWNL 464
+ C + D +I + ++ ++
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEK 36
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 87.0 bits (214), Expect = 3e-19
Identities = 22/334 (6%), Positives = 63/334 (18%), Gaps = 61/334 (18%)
Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230
R + + T W + G +
Sbjct: 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAG------------------ 73
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--------- 281
+ + G R + ++V+D V+ I + +
Sbjct: 74 -HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132
Query: 282 -YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
++ S V +H + S S+A D
Sbjct: 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPG-AAATHYLGSCPASLAASD 191
Query: 341 MVSPNEITLRR---VLVGHRAAVNVV--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG 395
+ + + ++ + + + + ++G
Sbjct: 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDG 251
Query: 396 H---------------------KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
+ + + ++ G +
Sbjct: 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS 311
Query: 435 GHEELVRCIRF--DAKR--IVSGAYDGKIKVWNL 464
+ I D + A + +++
Sbjct: 312 NGHD-SDAIIAAQDGASDNYANSAGTEVLDIYDA 344
Score = 71.5 bits (174), Expect = 4e-14
Identities = 22/346 (6%), Positives = 59/346 (17%), Gaps = 64/346 (18%)
Query: 121 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF--QIVS 178
+G V + G + V S + +
Sbjct: 41 YFAGTTENWVSCAGCGVTLGHSLGA--------FLSLAVAGHSG-SDFALASTSFARSAK 91
Query: 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY 238
D + ++D P + + + R I +S +
Sbjct: 92 GKRTDYVEVFD------------PVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLL 139
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
+ ++ + + GS +++
Sbjct: 140 ---------FFLFGSSAAAGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLAA 189
Query: 299 WDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS--------KDRSIAVWDMVSPNEITLR 350
D+ ++ S
Sbjct: 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAI 249
Query: 351 RVLVGHRAAVN------------------VVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
R A N ++ E + S +
Sbjct: 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309
Query: 393 LNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLE 434
+ + + + + + ++D +E
Sbjct: 310 I-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Score = 58.8 bits (141), Expect = 4e-10
Identities = 13/223 (5%), Positives = 39/223 (17%), Gaps = 26/223 (11%)
Query: 113 NFDEKYI-VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY- 170
+ G + + GS ++
Sbjct: 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA-SCFHIHPGAAATHYLGSCPASLAAS 190
Query: 171 --RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRIN 228
+ + + G S + G + I+
Sbjct: 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAID 250
Query: 229 CRSE------------------NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL 270
+ + +H Q +
Sbjct: 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI 310
Query: 271 -TGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
GH + D + + + ++D + + +++
Sbjct: 311 SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
Score = 38.0 bits (87), Expect = 0.002
Identities = 12/181 (6%), Positives = 36/181 (19%), Gaps = 33/181 (18%)
Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGS 163
+ N+ + + + + ++G++ G + +V+
Sbjct: 213 SSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272
Query: 164 SDNTIRY--RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGK 221
+ E + + + G + G
Sbjct: 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIA---AQDGA 326
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCL 280
+ + ++D S Q + L +
Sbjct: 327 SDN----------------------YANSAGTEVLDIYDAASDQDQSSVELDKGPESLSV 364
Query: 281 Q 281
Q
Sbjct: 365 Q 365
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 79.8 bits (195), Expect = 6e-17
Identities = 32/353 (9%), Positives = 72/353 (20%), Gaps = 66/353 (18%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
+ V + + + ++G + + + + +I
Sbjct: 21 PAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFS--------RIA 72
Query: 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV 237
D + ++D + T G
Sbjct: 73 RGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT--------------------S 112
Query: 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVR 297
+ V D ++L + D ++
Sbjct: 113 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHI-FPTAPDTFFMHCRDGSLA 171
Query: 298 VWDVNTGEMVNTL------IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITL 349
T + H +S G +V + I D+ S +
Sbjct: 172 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS-GDAKF 230
Query: 350 RRVLVGHRAAVNVVDF----------------------DEKYIVSASGDRTIKVWNTSSC 387
+ A + + R + V + +
Sbjct: 231 LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG 290
Query: 388 EFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
E + I + + L + D T+ + D E G LR +
Sbjct: 291 ERLAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342
Score = 42.9 bits (99), Expect = 5e-05
Identities = 7/104 (6%), Positives = 23/104 (22%), Gaps = 10/104 (9%)
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRG----------IACLQYRDRLVVSGSSDNTI 419
+ V + + + ++G IA + G + +
Sbjct: 21 PAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
++D +E + + + +
Sbjct: 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Score = 35.2 bits (79), Expect = 0.014
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 148
I++ + ++GD+T+ + + S E +R++N G
Sbjct: 305 INVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 345
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 79.1 bits (193), Expect = 9e-17
Identities = 25/325 (7%), Positives = 67/325 (20%), Gaps = 43/325 (13%)
Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-----RGIACLQYRDRLVVSGSSDNTIRY 170
YI++ + + V +T + + + + ++
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 171 RD--EFQIVSSSHDDTILIWDFLNYS--------ETPIQGGGGGGPPPSGPSIENNWRMG 220
D + + T + I +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
E + + L + + V D + ++ +
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 281 -------------------------QYDERVIISGSSDSTVRVWDVNTGEMVNT-LIHHC 314
+ D + + + D+ TGEM +
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240
Query: 315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSAS 374
+ + +D+ I +RV + H V D +
Sbjct: 241 VFYFSTAVNPAKTRAFGAYNVLESFDLEKNASI--KRVPLPHSYYSVNVSTDGSTVWLGG 298
Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRG 399
+ ++ + E ++
Sbjct: 299 ALGDLAAYDAETLEKKGQVDLPGNA 323
Score = 57.1 bits (136), Expect = 1e-09
Identities = 25/284 (8%), Positives = 66/284 (23%), Gaps = 37/284 (13%)
Query: 34 ASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHG 93
+ + L P + + A + + + ++ E +R+ Y
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 94 HINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ 153
++ R L D + D + + + + +
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQP 183
Query: 154 YRDRLVVSGSS------DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
+ S +D +++ +L D +
Sbjct: 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243
Query: 208 PSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCI 267
+ + K + N ++ +D I
Sbjct: 244 ------------------------------FSTAVNPAKTRAFGAYNVLESFDLEKNASI 273
Query: 268 KVL-TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
K + H+ + + D + G + + +D T E +
Sbjct: 274 KRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 78.5 bits (192), Expect = 1e-16
Identities = 33/358 (9%), Positives = 76/358 (21%), Gaps = 82/358 (22%)
Query: 130 VWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIW 188
V++ + + + ++G G A R VV+ + + + D + I
Sbjct: 2 VYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATT--------YFSRGSHGTRTDVVEII 53
Query: 189 DFLNYSETP-IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247
D I P GK +
Sbjct: 54 DNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKR------------------------L 89
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHT-GSVLCLQYDERVIISGSSD-STVRVWDVNTGE 305
V ++ + T VL + + + V G+
Sbjct: 90 YVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGK 149
Query: 306 MVNTLIH--HCEAVLHLRFSN-----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
+ + F N G + + ++ D ++ +
Sbjct: 150 EAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSG-DKPAFGKPWSLLTD 208
Query: 359 AVNVVDFDE--------------------------------KYIVSASGDRTIKVWNTSS 386
A + + V + +
Sbjct: 209 AERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLA 268
Query: 387 CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
+ V L I + + ++ + + + D GA V + +
Sbjct: 269 QQKVEPLVS----IQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
Score = 77.0 bits (188), Expect = 4e-16
Identities = 20/290 (6%), Positives = 61/290 (21%), Gaps = 68/290 (23%)
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-------- 282
+ + K + G R + +++ D +L + +
Sbjct: 25 APDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSA 84
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE--AVLHLRFS---NGMMVTCSKD-RSI 336
D + + + V ++ + E + + + +++
Sbjct: 85 DGKRLYVANITPAASVTVIDAV----SKKMLSEIDTAACVLAYPAGDDRFTALCESGKAL 140
Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFD----EKYIVSASGDRTIKVWNTSSCE--FV 390
V + E + + + + + ++ + S + F
Sbjct: 141 TVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFG 200
Query: 391 RTLNGHKRGIACLQYR--------------------------------DRLVVSGSSDNT 418
+ + +R ++ V
Sbjct: 201 KPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQ 260
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKR--IVSGAYDGKIKVWNL 464
+ L I+ D K A + V +
Sbjct: 261 RVARWDLAQQKVEPLVS-------IQVSEDDKPLFYGLTATSDLV-VMDA 302
Score = 64.2 bits (155), Expect = 7e-12
Identities = 18/310 (5%), Positives = 66/310 (21%), Gaps = 50/310 (16%)
Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
+ +++ + ++ + + + + ++ + D
Sbjct: 35 TTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVP-----SPYNTAFS----AD 85
Query: 173 EFQIVSSSHDDTILIWD-----FLNYSETPIQGGGGGGPP---------PSGPSIENNWR 218
++ ++ + SE P SG ++
Sbjct: 86 GKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLD 145
Query: 219 MGKFLLQRINCRSENSKGVYCLQYDDHK----IVSGLRDNTIKVWDRVS--LQCIKVLTG 272
+R + + + + ++ D K +
Sbjct: 146 ANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSL 205
Query: 273 HTGSV--LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTC 330
T + + + + ++ G + H + V
Sbjct: 206 LTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGS----------HKDPGTQVWVYD 255
Query: 331 SKDRSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF 389
K + ++ ++ L + V D + + + V + +
Sbjct: 256 LKSKQRVARWDLAQQKVEPLVSIQVSE-------DDKPLFYGLTATSDLV-VMDARTGAL 307
Query: 390 VRTLNGHKRG 399
Sbjct: 308 QHVEKQIGNT 317
Score = 62.3 bits (150), Expect = 3e-11
Identities = 15/194 (7%), Positives = 43/194 (22%), Gaps = 28/194 (14%)
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFS------------NGMMVTCSKDRSIAVWDMVSP 344
V+D + +++ + + ++ + + D +
Sbjct: 1 YVYDADAKKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTL 58
Query: 345 NEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-R 398
+ + H V D K + A+ V +
Sbjct: 59 DHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAA 118
Query: 399 GIACLQYRDRLVVSGSSDN-TIRLWDIECGACLRVL---EGHEELVRCIRFDAKR----I 450
+ D + + + G + + +A R
Sbjct: 119 CVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDY 178
Query: 451 VSGAYDGKIKVWNL 464
+ Y G ++ +
Sbjct: 179 LFTTYGGNVRSADF 192
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 77.2 bits (188), Expect = 3e-16
Identities = 35/314 (11%), Positives = 71/314 (22%), Gaps = 33/314 (10%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
I +G ++ S H + +
Sbjct: 28 AGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKT---------------SPSGY 71
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
S + IWD + P S ++ + + +
Sbjct: 72 YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 131
Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
+ + ++ R + + +
Sbjct: 132 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 191
Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
V G + + VL+ D V
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS------------- 238
Query: 355 GHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG---IACLQYRDRLVV 411
D I SAS D+TIK+WN ++ + +T+ R + + + +V
Sbjct: 239 -GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 297
Query: 412 SGSSDNTIRLWDIE 425
S S++ I + E
Sbjct: 298 SISANGFINFVNPE 311
Score = 61.8 bits (148), Expect = 3e-11
Identities = 35/256 (13%), Positives = 70/256 (27%), Gaps = 22/256 (8%)
Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVS--LQCIKVLTGHTGSVLCL------ 280
+E+S + + SG +++WD + +G V +
Sbjct: 55 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 114
Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
+ V V ++D T T + + S + D +
Sbjct: 115 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF 174
Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
P + + D S GD TI ++N
Sbjct: 175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 234
Query: 401 ACLQYR---------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL---VRCIRFDAK 448
+ S S+D TI++W++ + + + I + +
Sbjct: 235 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 294
Query: 449 RIVSGAYDGKIKVWNL 464
+VS + +G I N
Sbjct: 295 ALVSISANGFINFVNP 310
Score = 52.6 bits (124), Expect = 4e-08
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 3/113 (2%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
S V ++ L + D I SA
Sbjct: 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTIRYRD 172
S D+TIK+WN ++ + +T+ R + + + +VS S++ I + +
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 46.4 bits (108), Expect = 4e-06
Identities = 9/75 (12%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK 448
RT G + D++ + ++ + + H +
Sbjct: 14 RTARGTAVVLGNTPAGDKIQYC--NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY 71
Query: 449 RIVSGAYDGKIKVWN 463
SG G +++W+
Sbjct: 72 YCASGDVHGNVRIWD 86
Score = 41.8 bits (96), Expect = 1e-04
Identities = 22/198 (11%), Positives = 42/198 (21%), Gaps = 28/198 (14%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
+ + P + F +
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199
Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD 182
G + ++G K G+ + SGS D +I S+S D
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY 242
TI IW+ + + I + + +
Sbjct: 260 KTIKIWNVATLK----------------------------VEKTIPVGTRIEDQQLGIIW 291
Query: 243 DDHKIVSGLRDNTIKVWD 260
+VS + I +
Sbjct: 292 TKQALVSISANGFINFVN 309
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 76.8 bits (187), Expect = 6e-16
Identities = 31/345 (8%), Positives = 79/345 (22%), Gaps = 30/345 (8%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD--NTIRY 170
D I S + + + S ++ I ++ ++ + + +
Sbjct: 14 DGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70
Query: 171 RD---EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRI 227
D + + + + + + I
Sbjct: 71 YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 130
Query: 228 NCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DE 284
+ + + H G I V+D + T ++ D
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS 190
Query: 285 RVIISGSSDSTVRVWDVNTGEM-------VNTLIHHCEAVLHLRFS------NGMMVTCS 331
+ + S S D + + + +
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389
+ V P + + L +V Y A + ++ + +
Sbjct: 251 DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK- 309
Query: 390 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
V + + + L + V+ D I + +E R +E
Sbjct: 310 VTEVKNNLTDLR-LSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 66.0 bits (159), Expect = 2e-12
Identities = 31/312 (9%), Positives = 70/312 (22%), Gaps = 35/312 (11%)
Query: 115 DEKYIVSASGD--RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
D K + +++ + + + A R+ ++D
Sbjct: 53 DTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 112
Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQ------GGGGGGPPPSGPSIENNWRMGKFLLQR 226
+ + + + +++ + G + +
Sbjct: 113 DLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 172
Query: 227 INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC-------IKVLTGHTGSV-- 277
+ D + + DRV L V+ GS
Sbjct: 173 AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 232
Query: 278 LCLQYDERVIISGSSDSTVRVW-------DVNTGEMVNTLIHHCEAVLHLRFSNG--MMV 328
L +G D D M+ L
Sbjct: 233 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292
Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS 386
+ + +D+ + R + + + + D K ++ D I +
Sbjct: 293 GAPEKGVLLKYDVKT-------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
Query: 387 CEFVRTLNGHKR 398
E RT+ KR
Sbjct: 346 PEDERTVETDKR 357
Score = 60.6 bits (145), Expect = 1e-10
Identities = 19/260 (7%), Positives = 51/260 (19%), Gaps = 15/260 (5%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
+ + + + +
Sbjct: 96 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 155
Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDEFQIVSSS- 180
+ I V++ + + A + + S + D + S
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215
Query: 181 ----------HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230
+ + G S N G + +
Sbjct: 216 VVSKPFVIPLIPGSPNPTKL-VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES 274
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
S V + +D V + + + + + L D + ++
Sbjct: 275 SILIYSVPVHGEFAAYYQGAPEKGVLLKYD-VKTRKVTEVKNNLTDL-RLSADRKTVMVR 332
Query: 291 SSDSTVRVWDVNTGEMVNTL 310
D + + + E T+
Sbjct: 333 KDDGKIYTFPLEKPEDERTV 352
Score = 51.0 bits (120), Expect = 1e-07
Identities = 21/237 (8%), Positives = 56/237 (23%), Gaps = 27/237 (11%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS--TVRV 298
D I R + D +KV + ++ D +V + + +
Sbjct: 14 DGDLIAFVSRG-QAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70
Query: 299 WDVNTGE---------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL 349
+D TG+ V + + ++ + + + E +
Sbjct: 71 YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 130
Query: 350 RRVLVGHRAAVNV-VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD 407
+ + + + I V++ + + A
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS 190
Query: 408 RLVVSGSSDNTIRLWDIE-------CGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455
+ + S + D + V+ + + +G Y
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247
Score = 37.5 bits (85), Expect = 0.003
Identities = 18/231 (7%), Positives = 50/231 (21%), Gaps = 12/231 (5%)
Query: 57 FASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE 116
F F + + + D + + I + +
Sbjct: 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD--S 190
Query: 117 KYIVSASGDRTIKVWNTSSCEF-------VRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
K + S + F + + R + S + + +
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Query: 170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINC 229
+ + + L S G + K+ ++
Sbjct: 251 DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 310
Query: 230 RSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL 278
E + L+ D ++ D I + + + + ++
Sbjct: 311 T-EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 76.8 bits (187), Expect = 6e-16
Identities = 43/323 (13%), Positives = 82/323 (25%), Gaps = 21/323 (6%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
+ V D I + TL H + + R V +G ++ D
Sbjct: 21 GQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWD 78
Query: 173 ---------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFL 223
Q+ + D+ I L T I GG + +
Sbjct: 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI----WDLAAPTPRIK 134
Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
+ + + + +L S + + D
Sbjct: 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS 343
+ +G D+TVR WD+ + L + S V +
Sbjct: 195 GTKLWTGGLDNTVRSWDLRE-GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253
Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
+ L + K+ VS D + W T + +
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSC 312
Query: 404 QY--RDRLVVSGSSDNTIRLWDI 424
D+ +V+GS D ++++
Sbjct: 313 DISVDDKYIVTGSGDKKATVYEV 335
Score = 62.9 bits (151), Expect = 2e-11
Identities = 27/277 (9%), Positives = 56/277 (20%), Gaps = 51/277 (18%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTL-----NGHKRGIACLQYR--DRLVVSGSSDNT 167
+++ + +KVW+ S + I + ++ G +T
Sbjct: 62 PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120
Query: 168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRI 227
+ D + G + + Q
Sbjct: 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180
Query: 228 NCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV---------- 277
S T S+
Sbjct: 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA 240
Query: 278 ------------------------------LCLQYDERVIISGSSDSTVRVWDVNTGEMV 307
L Y + +S D+ + W G +
Sbjct: 241 VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300
Query: 308 NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMV 342
+VL S + +VT S D+ V++++
Sbjct: 301 FQSKES-SSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
Score = 55.2 bits (131), Expect = 6e-09
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 3/101 (2%)
Query: 71 WSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKV 130
+ + V S + + Y + + +SL + K+ VS D +
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291
Query: 131 WNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR 169
W T + + D+ +V+GS D
Sbjct: 292 WRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKAT 331
Score = 45.2 bits (105), Expect = 1e-05
Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 11/107 (10%)
Query: 366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
+ V D I + TL H + + R V +G +++WD
Sbjct: 21 GQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWD 78
Query: 424 IECGACLRVLE-----GHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
I + + +R + D ++ G + +W+
Sbjct: 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125
Score = 36.7 bits (83), Expect = 0.005
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
V D I + L H E+V + + + +G G +KVW++
Sbjct: 24 QPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79
Score = 31.7 bits (70), Expect = 0.18
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 108 ISLLPNFDEKYIVSASGDRTIKVWN 132
+S + D+KYIV+ SGD+ V+
Sbjct: 310 LSCDISVDDKYIVTGSGDKKATVYE 334
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 76.4 bits (186), Expect = 7e-16
Identities = 32/318 (10%), Positives = 90/318 (28%), Gaps = 38/318 (11%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTL---NGHKRGIACLQY---RDRLVVSGSSDNTI 168
+ ++ S D ++ V+ L +K + C + D + G+ I
Sbjct: 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81
Query: 169 R---YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQ 225
+ ++++ L + N +
Sbjct: 82 LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKN 141
Query: 226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV------LC 279
+ ++ ++ + + +++ G+ ++ ++ + + +G
Sbjct: 142 LNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201
Query: 280 LQYDERVIISGSSDSTVRVWDVNTGE---------------MVNTLIHHCEAVLHLRFSN 324
L ++ S D V V + + + V + FS
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261
Query: 325 GMM--VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
T D I+ W++ + + ++ + +V + + + A+ D T K
Sbjct: 262 RHKFLYTAGSDGIISCWNLQTRKK--IKNFAKFNEDSVVKIACSDNILCLATSDDTFKTN 319
Query: 383 NTSSCEFVRTLNGHKRGI 400
+T+ + I
Sbjct: 320 AAID----QTIELNASSI 333
Score = 69.5 bits (168), Expect = 1e-13
Identities = 21/223 (9%), Positives = 70/223 (31%), Gaps = 22/223 (9%)
Query: 264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH---HCEAVL 318
+Q +++ + ++ + +++ S D ++ V+ + L+ + +L
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 319 HLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
F + + + I D++ + + + + +++AS
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGI--------ACLQYRDRLVVSGSSDNTIRLWDIECG 427
D I+V + + + + ++ G +++ ++ + +
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180
Query: 428 ACLRVLEGHEELVRCIRF------DAKRIVSGAYDGKIKVWNL 464
L IR + + + DG++ V
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223
Score = 67.6 bits (163), Expect = 7e-13
Identities = 38/347 (10%), Positives = 88/347 (25%), Gaps = 48/347 (13%)
Query: 139 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD-------EFQIVSSSHDDTILIWD 189
V+ K I+ ++ L++ S D ++ + S + +L +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 190 FLNYSETPIQGGGGGGPPPSGP--SIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247
F++ ++ I G G + + CR + +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMV 307
+ + T + + + +I G ++S V+ + + E
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183
Query: 308 NTLIHHCEAVLHLRF------SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
N I +R S D +AV +
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY------------- 230
Query: 362 VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 419
+ K + + +++ R + + + SD I
Sbjct: 231 ---------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275
Query: 420 RLWDIECGACLRVLEGHEEL-VRCIRFDAKRIVSGAYDGKIKVWNLV 465
W+++ ++ E V I + D K +
Sbjct: 276 SCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAI 322
Score = 52.5 bits (124), Expect = 5e-08
Identities = 15/162 (9%), Positives = 51/162 (31%), Gaps = 16/162 (9%)
Query: 215 NNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV----- 269
G R + Y D ++ D+ ++ +
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245
Query: 270 -LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLRFSNG 325
T V +++ + + + SD + W++ T + + + ++V+ + S+
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDN 305
Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE 367
++ + D + + + + +++ ++ E
Sbjct: 306 ILCLATSDDTFKTNAAIDQT-------IELNASSIYIIFDYE 340
Score = 43.3 bits (100), Expect = 4e-05
Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNT 167
S+ + K++ +A D I WN + + ++ ++ + + D ++ +SD+T
Sbjct: 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDT 315
Query: 168 IRYRDEFQIVSSSHDDTILIWD 189
+ + +I I
Sbjct: 316 FKTNAAIDQTIELNASSIYIIF 337
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 75.4 bits (183), Expect = 1e-15
Identities = 42/276 (15%), Positives = 72/276 (26%), Gaps = 5/276 (1%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
D K + SA + I W+ S+ R + H I ++ + + S +
Sbjct: 23 DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVP 82
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
+ + G I + S
Sbjct: 83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 142
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
+ S + + ++ I T V S
Sbjct: 143 ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRK 202
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLR 350
N A + + + T S D S+ VW+M P++ +
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262
Query: 351 RVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS 385
++VN V + +E IVSA D IK WN
Sbjct: 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 63.9 bits (153), Expect = 7e-12
Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 25/302 (8%)
Query: 139 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFL 191
+ GH + I L + + S ++ I D ++ H I
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 192 NYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL 251
+ + S G + + +
Sbjct: 65 SKGDLFTV---------SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 115
Query: 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
+ + +V + S + L D++ + G DS V V+ ++ +
Sbjct: 116 AACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT 175
Query: 312 HHCEA-----VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD 366
A + + S+ T + A D
Sbjct: 176 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 235
Query: 367 EKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLW 422
+ + S D ++ VWN S + H + + + +VS D+ I+ W
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Query: 423 DI 424
++
Sbjct: 296 NV 297
Score = 58.8 bits (140), Expect = 4e-10
Identities = 17/145 (11%), Positives = 46/145 (31%), Gaps = 4/145 (2%)
Query: 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLR 321
+V GH ++ L D + + S ++ + WD++TG H + ++
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 322 FSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIK 380
++ + T S D + V + + V + + ++ +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 381 VWNTSSCEFVRTLNGHKRGIACLQY 405
+ ++ + +A
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSND 147
Score = 52.3 bits (123), Expect = 5e-08
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF 445
+ GH + I L + + S ++ I WDI G RV + H ++ I+
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Score = 46.1 bits (107), Expect = 5e-06
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
G+ +V GH + + + D K + S +G I W++
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41
Score = 39.6 bits (90), Expect = 6e-04
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Query: 304 GEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
G + H +A+ L S + + + I WD+ + R H +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS--NRVFPDVHATMIT 59
Query: 362 VVDFDEKY-IVSASGDRTIKVWNTSSCE 388
+ K + + S D +KV
Sbjct: 60 GIKTTSKGDLFTVSWDDHLKVVPAGGSG 87
Score = 39.2 bits (89), Expect = 7e-04
Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 4/118 (3%)
Query: 56 QFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFD 115
+ + + + D ++ +T + + D
Sbjct: 176 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 235
Query: 116 EKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIR 169
+ + S D ++ VWN S + H + + + +VS D+ I+
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293
Score = 33.0 bits (73), Expect = 0.060
Identities = 18/175 (10%), Positives = 42/175 (24%), Gaps = 29/175 (16%)
Query: 87 MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 146
++ + + I S + +
Sbjct: 150 FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVA 209
Query: 147 RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGP 206
+ D ++ + S D+++++W+ S+ PI G
Sbjct: 210 NNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH-- 267
Query: 207 PPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKVWD 260
V + + ++ IVS +D+ IK W+
Sbjct: 268 --------------------------AMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 30.7 bits (67), Expect = 0.33
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTS 134
++ + +E IVSA D IK WN
Sbjct: 269 MSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 73.8 bits (179), Expect = 3e-15
Identities = 38/290 (13%), Positives = 83/290 (28%), Gaps = 9/290 (3%)
Query: 137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET 196
E ++T++GH +GI L ++SGS D I S D + LI N
Sbjct: 4 EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWS---SSSMHQDHSNLIVSLDNSKAQ 58
Query: 197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256
++ + + N + +
Sbjct: 59 EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 118
Query: 257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA 316
++ + ++ S + + A
Sbjct: 119 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD 376
+ + S++ + W + + A + +E + + S D
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE--EEIEEDLVATGSLD 236
Query: 377 RTIKVWNTSS-CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDI 424
I +++ + ++ LN HK G+ L + +VS +D I+ W++
Sbjct: 237 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNV 286
Score = 68.4 bits (165), Expect = 2e-13
Identities = 36/269 (13%), Positives = 73/269 (27%), Gaps = 11/269 (4%)
Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178
++S S D I W++SS H I L S S + +
Sbjct: 24 LISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE 78
Query: 179 SSHDDTILIWDFLNY---SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK 235
+ + + G + N + +
Sbjct: 79 FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLE 138
Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
+Q + D + + S I + + + + T
Sbjct: 139 EGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT 198
Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
R + + + ++ T S D +I ++ + P + + + L
Sbjct: 199 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK--IIKALNA 256
Query: 356 HRAAVNVVDF-DEKYIVSASGDRTIKVWN 383
H+ VN + + +VS+ D IK WN
Sbjct: 257 HKDGVNNLLWETPSTLVSSGADACIKRWN 285
Score = 51.5 bits (121), Expect = 7e-08
Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 2/109 (1%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
+ + + +++ + + + + +E + +
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233
Query: 123 SGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIR 169
S D I +++ + ++ LN HK G+ L + +VS +D I+
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIK 282
Score = 47.6 bits (111), Expect = 1e-06
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 388 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA 447
E ++T++GH +GI L ++SGS D I W + H L+ +
Sbjct: 4 EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSK 56
Query: 448 KRIVSGAYDGKIKVWN 463
+ S N
Sbjct: 57 AQEYSSISWDDTLKVN 72
Score = 41.9 bits (96), Expect = 1e-04
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 429 CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
L+ + GH + + + + ++SG+YDG+I W+
Sbjct: 5 VLKTISGHNKGITALTVN--PLISGSYDGRIMEWSS 38
Score = 28.0 bits (60), Expect = 2.6
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 115 DEKYIVSASGDRTIKVWN 132
+VS+ D IK WN
Sbjct: 268 TPSTLVSSGADACIKRWN 285
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 66.5 bits (160), Expect = 1e-12
Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 32/265 (12%)
Query: 232 ENSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVL--------TGHTGSVLC 279
S V +++ + SG + VW + + G +
Sbjct: 61 HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120
Query: 280 LQYD----ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM---VTCSK 332
+ +D ++ D+ ++G + + H + + +T
Sbjct: 121 ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 180
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW--------NT 384
D S+ + R + V V+F + +
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 240
Query: 385 SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 444
A + + +D TIR+WD+ C++ ++ + +
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 300
Query: 445 F-----DAKRIVSGAYDGKIKVWNL 464
RI+S + DG + + L
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFYEL 325
Score = 61.1 bits (146), Expect = 7e-11
Identities = 29/253 (11%), Positives = 67/253 (26%), Gaps = 23/253 (9%)
Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR 171
P +Y+ S + VW + + ++ + + + +S +
Sbjct: 73 PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 132
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQG------------------GGGGGPPPSGPSI 213
+ + + L Q G GP
Sbjct: 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 192
Query: 214 ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH 273
+ + Q R + K + +
Sbjct: 193 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ 252
Query: 274 TGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-----NGMMV 328
G D + + +D+T+RVWDV T + V + + + + NG ++
Sbjct: 253 GGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 312
Query: 329 TCSKDRSIAVWDM 341
+ S D ++ +++
Sbjct: 313 SLSLDGTLNFYEL 325
Score = 54.5 bits (129), Expect = 8e-09
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 87 MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 146
+ I L D + + D TI+VW+ ++ + V+ K
Sbjct: 234 DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293
Query: 147 RGIACLQYR-----DRLVVSGSSDNTIRYRD 172
+ + Q + ++S S D T+ + +
Sbjct: 294 QQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 39.1 bits (89), Expect = 8e-04
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 7/117 (5%)
Query: 317 VLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKY 369
HL + N + C K + D + + + V V F +Y
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426
+ S + VW + + ++ + + + +S + E
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136
Score = 38.4 bits (87), Expect = 0.001
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHE-ELVRCIRF-- 445
T ++ + + +R D + GH +V ++F
Sbjct: 14 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73
Query: 446 --DAKRIVSGAYDGKIKVWNL 464
++ + SG GK+ VW
Sbjct: 74 IKGSQYLCSGDESGKVIVWGW 94
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 65.6 bits (159), Expect = 4e-12
Identities = 50/391 (12%), Positives = 89/391 (22%), Gaps = 81/391 (20%)
Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRYRD---- 172
+ V+ I + + S+ E L+ I+ L R + D + D
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK 93
Query: 173 ---------------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGG 205
++ I + +I D IQ G
Sbjct: 94 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153
Query: 206 PPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ 265
E + Y IV+ I + D L
Sbjct: 154 YDEQEYHPEPRVA-----------------AILASHYRPEFIVNVKETGKILLVDYTDLN 196
Query: 266 CIKVLTGHTGSVLC---LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
+K L L R I+ ++ V + + H
Sbjct: 197 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGR 256
Query: 323 SNGMMVT--CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT 378
+ + + D T + + + + +
Sbjct: 257 GANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNS 316
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
++ TLN + D + + SD + I A + EG
Sbjct: 317 QYLY------VDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWA--GITEGQ- 367
Query: 438 ELVRCIRFDAKRIVSGAY--DGK---IKVWN 463
R+V G + DG VWN
Sbjct: 368 ----------PRVVQGEFNKDGTEVWFSVWN 388
Score = 52.1 bits (124), Expect = 8e-08
Identities = 18/153 (11%), Positives = 43/153 (28%), Gaps = 15/153 (9%)
Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
N VT IA+ D + EI + G+ ++ + +Y+ D + + +
Sbjct: 32 NLFSVTLRDAGQIALIDGST-YEI-KTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMID 89
Query: 384 TSSCE-----FVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRLWDIECGACLRVLE 434
E ++ + R I + + + D E ++
Sbjct: 90 LWMKEPTTVAEIKIGSEA-RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 148
Query: 435 GHEELVRCIRFDAKRIVSGAY---DGKIKVWNL 464
+ + V+ + N+
Sbjct: 149 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 181
Score = 49.8 bits (118), Expect = 4e-07
Identities = 17/123 (13%), Positives = 40/123 (32%), Gaps = 11/123 (8%)
Query: 352 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDR 408
V R + D+D + + V+ I + + S+ E L+ I+ L R
Sbjct: 15 VAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGR 74
Query: 409 LVVSGSSDNTIRLWDIECG-----ACLRVLEGHEELVRCIRF--DAKR-IVSGAYDGKIK 460
+ D + + D+ A +++ + + K I + +
Sbjct: 75 YLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 134
Query: 461 VWN 463
+ +
Sbjct: 135 IMD 137
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 61.0 bits (146), Expect = 6e-11
Identities = 32/282 (11%), Positives = 79/282 (28%), Gaps = 11/282 (3%)
Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
++ S I V + +S + T+ G ++ V+ + N + D
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIID----T 61
Query: 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV 237
++++ + G S + + ++ G+
Sbjct: 62 ATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGL 121
Query: 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQYDERVIISGSSDSTV 296
V+ D T+ V + V+ I ++ + + D + + DS
Sbjct: 122 ALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMS 181
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV-LVG 355
V + A + + + + + T + +
Sbjct: 182 ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241
Query: 356 HRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSCEFVRTLN 394
+ D K + V+ S T+ V +T++ T+
Sbjct: 242 VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 51.4 bits (121), Expect = 1e-07
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
++ S I V + +S + T+ G ++ V+ + N + + D
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 429 C 429
Sbjct: 66 V 66
Score = 43.7 bits (101), Expect = 3e-05
Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMV 342
I+ S + V DV + ++ T+ + S + V + +++ D
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62
Query: 343 SPN 345
+ N
Sbjct: 63 TNN 65
Score = 42.9 bits (99), Expect = 4e-05
Identities = 6/57 (10%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKIKVWNL 464
++ S + I + D+ + D ++ V+ A+ + + +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDT 61
Score = 37.5 bits (85), Expect = 0.002
Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 40/301 (13%)
Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
F +++S D I + D + T G P G I + G +
Sbjct: 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN---PMGAVISPD---GTKVY--------- 47
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
V+ N + + D + I + + + + ++
Sbjct: 48 --------------VANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM 93
Query: 294 --STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR 351
ST+ V D + + T+ + +G + + + V + + + +
Sbjct: 94 ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153
Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-----HKRGIACLQYR 406
V VG V D + A+ D + V + +
Sbjct: 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTK 213
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKIKVWN 463
+ NT+ + D + + I D K++ V+ ++ + V +
Sbjct: 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVID 272
Query: 464 L 464
Sbjct: 273 T 273
Score = 31.4 bits (69), Expect = 0.20
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 115 DEKYI-VSASGDRTIKVWNTSSCEFVRTLN 143
D K + V+ S T+ V +T++ T+
Sbjct: 254 DGKKVYVALSFCNTVSVIDTATNTITATMA 283
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 53.8 bits (129), Expect = 2e-08
Identities = 32/260 (12%), Positives = 65/260 (25%), Gaps = 48/260 (18%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLT---------------GHTGSVLC-------LQYDE 284
++ + + ++ K+ T V C D
Sbjct: 87 FINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDG 146
Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDM 341
+S + D T ++ +I + + TC
Sbjct: 147 TDFSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAG 205
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR--G 399
N+ V+V + + + + V EF R + K G
Sbjct: 206 TMRNDR--DWVVVFNVERIAAAVKAGNFKT-IGDSKVPVVDGRGESEFTRYIPVPKNPHG 262
Query: 400 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-------------RFD 446
+ + +G T+ + I+ + E EL I FD
Sbjct: 263 LNTSPDGKYFIANGKLSPTVSVIAID--KLDDLFEDKIELRDTIVAEPELGLGPLHTTFD 320
Query: 447 AK--RIVSGAYDGKIKVWNL 464
+ + D ++ WN+
Sbjct: 321 GRGNAYTTLFIDSQVCKWNI 340
Score = 41.8 bits (98), Expect = 1e-04
Identities = 38/318 (11%), Positives = 84/318 (26%), Gaps = 53/318 (16%)
Query: 115 DEKYI-VSASGDRTIKVWNTSSCEFVRTL---NGHK-RGIACLQYRDRLVVSGSSDNTIR 169
D KY+ ++ + + + + N G+ + V +++ I
Sbjct: 82 DGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIP 141
Query: 170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW----RMGKFLLQ 225
++ S + T+ + Q G + +
Sbjct: 142 QPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAV 201
Query: 226 RINCRSENS----------KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275
+ N + ++ + K + V R + + +
Sbjct: 202 DLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD--SKVPVVDGRGESEFTRYIPVPKN 259
Query: 276 SVLC--LQYDERVIISGSSDSTVRVWDVNT-GEMVNTLIHHCEAV----------LHLRF 322
+ I +G TV V ++ ++ I + + LH F
Sbjct: 260 PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTF 319
Query: 323 SNGMMV--TCSKDRSIAVWDMVSPNEI--------TLRRVLV----GHRAAVNVVDF--D 366
T D + W++ + +++ V GH A D
Sbjct: 320 DGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDAD 379
Query: 367 EKYIVSA---SGDRTIKV 381
K++V S DR + V
Sbjct: 380 GKWLVVLSKFSKDRFLPV 397
Score = 37.6 bits (87), Expect = 0.003
Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 25/155 (16%)
Query: 277 VLCLQYDERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRS 335
V + DE SG VRV V + + + V + + + S
Sbjct: 3 VAPGELDEYYGFWSGGHQGEVRVLGVPSMRELMRI-----PVFN---VDSATGWGITNES 54
Query: 336 IAVWDMVSPNEITLRRVLVG--HRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSCEFV 390
+ ++ L G H +++ D D KY+ ++ + + +
Sbjct: 55 KEILG-------GDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTD 107
Query: 391 RTL---NGHK-RGIACLQYRDRLVVSGSSDNTIRL 421
+ N G+ + V +++ I
Sbjct: 108 KITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQ 142
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 53.4 bits (127), Expect = 3e-08
Identities = 52/395 (13%), Positives = 100/395 (25%), Gaps = 83/395 (21%)
Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR 171
+ + V+ I + + S + V+ ++ +S
Sbjct: 28 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHI-------SRMS---------A 71
Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS 231
++ D I + D T + G S S + ++
Sbjct: 72 SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYT-------- 123
Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVII 288
I + D +L+ ++++ +V Y I
Sbjct: 124 ---------------IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 168
Query: 289 SGSSDSTVRVWDVNTGEMV------------NTLIHHCEAVLHLRFSNG---MMVTCSKD 333
S + + +V V T I + + + M +
Sbjct: 169 IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNS 228
Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSC-- 387
+AV D L V K + S GD +I + T
Sbjct: 229 NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH 288
Query: 388 -----EFVRTLNGHKRGIACLQY---RDRLVV------SGSSDNTIRLWDIECGACLRVL 433
+ V L G G ++ L V ++ ++D++ +
Sbjct: 289 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV 348
Query: 434 EGHEELVRCIRFDAKRIVSGAY--DGK---IKVWN 463
E + AKR+V Y G VWN
Sbjct: 349 LPIAEWAD-LGEGAKRVVQPEYNKRGDEVWFSVWN 382
Score = 49.6 bits (117), Expect = 5e-07
Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 12/123 (9%)
Query: 352 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYRD 407
V R + D D + V+ I + + S + V+ ++ +
Sbjct: 15 VKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISR-MSASG 73
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLE-----GHEELVRCIRF--DAKRIVSGAYDGKIK 460
R ++ D I + D+ +V E + + + ++GAY
Sbjct: 74 RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQF 133
Query: 461 VWN 463
Sbjct: 134 AIM 136
Score = 28.8 bits (63), Expect = 1.6
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 16/78 (20%)
Query: 249 SGLRDNTIKVWDRVSLQCIK---------VLTGHTGSVLCLQYD---ERVIIS----GSS 292
++ V+D +L L V+ +Y+ + V S +
Sbjct: 327 DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKND 386
Query: 293 DSTVRVWDVNTGEMVNTL 310
S + V D T ++ +
Sbjct: 387 SSALVVVDDKTLKLKAVV 404
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 46.7 bits (109), Expect = 3e-06
Identities = 39/313 (12%), Positives = 82/313 (26%), Gaps = 23/313 (7%)
Query: 120 VSASGDRTIKVWN---TSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
+++ + I VWN + + ++ G + + + L V + + +
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL---AY 64
Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
+I T L S T I ++ G + R+
Sbjct: 65 RIAPDDGALTFAAESALPGSLTHISTD-----HQGQFVFVGSYNAGNVSVTRLEDGLPVG 119
Query: 235 KGVYCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
D H + T+ V + G ++ E + G+
Sbjct: 120 VVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGP 179
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI--AVWDMVSPNEITLRR 351
+ ++ V L+ +G + + D +I +
Sbjct: 180 RHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 239
Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVV 411
A + VS G K + R N G L+
Sbjct: 240 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG-------KYLIA 292
Query: 412 SGSSDNTIRLWDI 424
+G + I +++I
Sbjct: 293 AGQKSHHISVYEI 305
Score = 38.7 bits (88), Expect = 0.001
Identities = 9/75 (12%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 371 VSASGDRTIKVWN---TSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 425
+++ + I VWN + + ++ G + + + L V + + + I
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 426 CGACLRVLEGHEELV 440
L
Sbjct: 68 PDDGALTFAAESALP 82
Score = 37.9 bits (86), Expect = 0.002
Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 5/111 (4%)
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFS---NGMMVTCSKDRSIAV 338
+ V I+ + VW++N + + V + S + V + +
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF 389
+ + + ++ + D + G + + E
Sbjct: 64 YRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLED 114
Score = 36.0 bits (81), Expect = 0.009
Identities = 6/61 (9%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLE--GHEELVRCIRF--DAKRI-VSGAYDGKIKVWN 463
+ ++ I +W++ L + + V+ + D + + V + ++ +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 464 L 464
+
Sbjct: 66 I 66
Score = 26.3 bits (56), Expect = 8.0
Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 6/66 (9%)
Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV-----LCLQYDER-VIISGSSDSTVR 297
H + I V+ + G + + + + +I +G +
Sbjct: 242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS 301
Query: 298 VWDVNT 303
V+++
Sbjct: 302 VYEIVG 307
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 102
Score = 37.8 bits (87), Expect = 4e-04
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 91 QHGHINTYLKPMLQRDFISLLPN 113
Q H+ ++P QRDFISLLP
Sbjct: 2 QVKHMMQVIEPQFQRDFISLLPK 24
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 39.4 bits (91), Expect = 8e-04
Identities = 15/195 (7%), Positives = 52/195 (26%), Gaps = 9/195 (4%)
Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
+Y +K+ + + + +V S+ V +
Sbjct: 153 DPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW-VAMHPTGNYLYALM 211
Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR 350
+ + + + ++ + HH ++ + T V ++ + +
Sbjct: 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVC-ALTFSGKYMF 270
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-L 409
++ + YI + T GH ++ + D +
Sbjct: 271 ASSRANKFELQG------YIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324
Query: 410 VVSGSSDNTIRLWDI 424
++ + + ++
Sbjct: 325 AITDDQEGWLEIYRW 339
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1
(beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 28.6 bits (63), Expect = 0.73
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 101 PMLQRDFISLLPNFDEKYIV 120
MLQRDFI+ LP +I
Sbjct: 4 IMLQRDFITALPARGLDHIA 23
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 29.2 bits (64), Expect = 0.99
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Query: 369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWD 423
I + + ++ T + + L + +A + D VV S D + ++
Sbjct: 214 LIADNHNNFNLTIF-TQDGQLISALESKVKHAQCFDVALM--DDGSVVLASKDYRLYIYR 270
Query: 424 I 424
Sbjct: 271 Y 271
>d1aym1_ b.121.4.1 (1:) Rhinovirus coat proteins {Human rhinovirus
16, (HRV-16) [TaxId: 31708]}
Length = 285
Score = 28.3 bits (63), Expect = 2.2
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 275 GSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
G C+ I+ +D + W++N EM + E + RF
Sbjct: 72 GRSGCIHESVLDIVDNYNDQSFTKWNINLQEMA-QIRRKFEMFTYARF 118
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 28.2 bits (61), Expect = 2.9
Identities = 27/197 (13%), Positives = 54/197 (27%), Gaps = 20/197 (10%)
Query: 259 WDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
+R+SLQ ++ + ++ +C YDE SG + V +
Sbjct: 270 QERISLQWLRRIQNYSVMDIC-DYDES---SGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325
Query: 319 HLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGD 376
N S + ++ + G + + Y +S
Sbjct: 326 FTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYK 385
Query: 377 RT--------IKVWNTSSCEFV-RTLNGHKRGIACLQY---RDRLVVSGSSDNT--IRLW 422
I++ + + + LN + + + + S L
Sbjct: 386 GMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLH 445
Query: 423 DIECGACLRVLEGHEEL 439
LRVLE + L
Sbjct: 446 SSVNDKGLRVLEDNSAL 462
>d2qamz1 d.325.1.1 (Z:2-78) Ribosomal protein L28 (L28p)
{Escherichia coli [TaxId: 562]}
Length = 77
Score = 25.0 bits (55), Expect = 5.9
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 24/76 (31%)
Query: 85 SRMC-----------HYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNT 133
SR+C + H T +R F LPN S R + + +
Sbjct: 1 SRVCQVTGKRPVTGNNRSHALNAT------KRRF---LPNLHSHRFWVESEKRFVTLRVS 51
Query: 134 SSCEFVRTLNGHKRGI 149
+ +R ++ K+GI
Sbjct: 52 AKG--MRVID--KKGI 63
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]}
Length = 129
Score = 26.2 bits (57), Expect = 6.0
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 280 LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHH 313
+ Y R I +S + V + G M T + H
Sbjct: 13 MTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGH 46
>d1nm8a1 c.43.1.3 (A:9-385) Carnitine acetyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 377
Score = 26.9 bits (59), Expect = 6.4
Identities = 7/46 (15%), Positives = 13/46 (28%)
Query: 63 MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFI 108
+ D Q Q+ F L+ + ++ N L
Sbjct: 93 VMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKP 138
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
domain {Paracoccus denitrificans [TaxId: 266]}
Length = 459
Score = 26.7 bits (59), Expect = 7.3
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 438 ELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVS 485
E+ + F+ I G + N V +D R ++L R + ++
Sbjct: 227 EMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA 274
>d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease,
catalytic domain {Helicobacter pylori [TaxId: 210]}
Length = 389
Score = 26.6 bits (59), Expect = 7.9
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 9/53 (16%)
Query: 165 DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQG---------GGGGGPPP 208
++ + D++ + + H DT+ + + I G G GGG P
Sbjct: 101 NHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAP 153
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.425
Gapped
Lambda K H
0.267 0.0718 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,909,709
Number of extensions: 91444
Number of successful extensions: 866
Number of sequences better than 10.0: 1
Number of HSP's gapped: 385
Number of HSP's successfully gapped: 161
Length of query: 486
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 397
Effective length of database: 1,185,626
Effective search space: 470693522
Effective search space used: 470693522
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.0 bits)