BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9185
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O08574|MESP2_MOUSE Mesoderm posterior protein 2 OS=Mus musculus GN=Mesp2 PE=1 SV=1
Length = 370
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPP-CKPPGKKLSKIESLRMAIRYIRHLQCLL 199
+++A +RE+ RMR + RA LR LPP P G+ L+KIE+LR+AIRYI HL LL
Sbjct: 81 RQSASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSALL 137
>sp|Q0VG99|MESP2_HUMAN Mesoderm posterior protein 2 OS=Homo sapiens GN=MESP2 PE=1 SV=2
Length = 397
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 127 ANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPP-CKPPGKKLSKIESL 185
A T R + +++A +RE+ RMR + RA LR LPP P G+ L+KIE+L
Sbjct: 66 AAATTPRRARTGPAGGQRQSASEREKLRMRTLARALHELRRFLPPSLAPAGQSLTKIETL 125
Query: 186 RMAIRYIRHLQCLL 199
R+AIRYI HL +L
Sbjct: 126 RLAIRYIGHLSAVL 139
>sp|P97309|MESP1_MOUSE Mesoderm posterior protein 1 OS=Mus musculus GN=Mesp1 PE=2 SV=2
Length = 243
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPP-CKPPGKKLSKIESLRMAIRYIRHLQCLL 199
+++A +RE+ RMR + RA LR LPP P G+ L+KIE+LR+AIRYI HL +L
Sbjct: 78 RQSASEREKLRMRTLARALHELRRFLPPSVAPTGQNLTKIETLRLAIRYIGHLSAVL 134
>sp|Q9BRJ9|MESP1_HUMAN Mesoderm posterior protein 1 OS=Homo sapiens GN=MESP1 PE=2 SV=1
Length = 268
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPP-CKPPGKKLSKIESLRMAIRYIRHLQCLL 199
+++A +RE+ RMR + RA LR LPP P G+ L+KIE+LR+AIRYI HL +L
Sbjct: 84 RQSASEREKLRMRTLARALHELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSAVL 140
>sp|P22980|MYOD1_CAEEL Myoblast determination protein 1 homolog OS=Caenorhabditis elegans
GN=hlh-1 PE=2 SV=2
Length = 324
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 102 LVEQSLVKYETPNTVTSTAPTPYSGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRA 161
L+ QS V + +T TSTA GA R D +K A RER R+R +N A
Sbjct: 119 LIIQSRVDSQHEDTTTSTA----GGAGVGGPRRTKFVLSVDRRKAATMRERRRLRKVNEA 174
Query: 162 FDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLEYGPEYETIL 209
F++++ R C P ++L K+E LR AI YI +L+ +L+ + I+
Sbjct: 175 FEVVKQRT--CPNPNQRLPKVEILRSAIDYINNLERMLQQAGKMTKIM 220
>sp|P70661|NGN3_MOUSE Neurogenin-3 OS=Mus musculus GN=Neurog3 PE=2 SV=1
Length = 214
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 125 SGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIES 184
G N + +S R +K A DRER RM ++N A D LR L P P KL+KIE+
Sbjct: 66 GGRNRPKSELALSKQRRSRRKKANDRERNRMHNLNSALDALRGVL-PTFPDDAKLTKIET 124
Query: 185 LRMAIRYIRHLQCLLE------YGPE 204
LR A YI L L YGPE
Sbjct: 125 LRFAHNYIWALTQTLRIADHSFYGPE 150
>sp|O09105|NDF4_MOUSE Neurogenic differentiation factor 4 OS=Mus musculus GN=Neurod4 PE=1
SV=1
Length = 330
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 141 RDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
R + A RERTRM +N A D LR R+ PC +KLSKIE+LR+A YI L +LE
Sbjct: 86 RARRVKANARERTRMHGLNDALDNLR-RVMPCYSKTQKLSKIETLRLARNYIWALSEVLE 144
Query: 201 YGPEYE 206
G E
Sbjct: 145 TGQTLE 150
>sp|Q9HD90|NDF4_HUMAN Neurogenic differentiation factor 4 OS=Homo sapiens GN=NEUROD4 PE=2
SV=2
Length = 331
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 141 RDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
R + A RERTRM +N A D LR R+ PC +KLSKIE+LR+A YI L +LE
Sbjct: 86 RARRVKANARERTRMHGLNDALDNLR-RVMPCYSKTQKLSKIETLRLARNYIWALSEVLE 144
Query: 201 YG 202
G
Sbjct: 145 TG 146
>sp|Q6VNZ9|MYF6_DANRE Myogenic factor 6 OS=Danio rerio GN=myf6 PE=2 SV=1
Length = 239
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRY 191
C RK + ++R +K A RER R++ +N AFD L+ + P P ++L K+E LR AI Y
Sbjct: 84 CKRKSAPTDR--RKAATLRERRRLKKINEAFDALKKKTVP--NPNQRLPKVEILRSAINY 139
Query: 192 IRHLQCLL 199
I LQ LL
Sbjct: 140 IEKLQDLL 147
>sp|O88940|MUSC_MOUSE Musculin OS=Mus musculus GN=Msc PE=1 SV=1
Length = 201
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 34/161 (21%)
Query: 72 MTSGQISSSTLTVLHPMEYCYPPPPLSLPVLVEQSLVKYETPNTVTSTAPT-----PYSG 126
M++G +S + + ++ YP P P L+ Y +P+ ++S P S
Sbjct: 1 MSTGSVSDPEDSEMRGLQRVYPAPASKRPPLLRMER-GYGSPSDISSAEEEDGEEEPGSL 59
Query: 127 ANTTRCHRK---------------------------ISDSERDYKKTACDRERTRMRDMN 159
C RK ++ ++ + A RER RMR ++
Sbjct: 60 GAAGGCKRKRLRGADAGGAGGRAGGAGKKPLPPKGSAAECKQSQRNAANARERARMRVLS 119
Query: 160 RAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
+AF L+ LP PP KLSK+++LR+A YI HL+ LL+
Sbjct: 120 KAFSRLKTSLP-WVPPDTKLSKLDTLRLASSYIAHLRQLLQ 159
>sp|Q10007|HLH6_CAEEL Helix-loop-helix protein 6 OS=Caenorhabditis elegans GN=hlh-6 PE=4
SV=1
Length = 268
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 149 DRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLL 199
+RER R+R++N ++ LR LP K++SK+++LR+AIRYI+HL LL
Sbjct: 180 ERERCRVRNVNDGYERLRKHLP-VHFDEKRISKVDTLRLAIRYIKHLDNLL 229
>sp|Q17295|MYOD1_CAEBR Myoblast determination protein 1 homolog OS=Caenorhabditis briggsae
GN=hlh-1 PE=2 SV=1
Length = 329
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 119 TAP--TPYSGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPG 176
TAP T +GAN R ++ D +K A RER R+R +N AF++++ R C P
Sbjct: 141 TAPIATLVAGANAPRR------TKLDRRKAATMRERRRLRKVNEAFEVVKQRT--CPNPN 192
Query: 177 KKLSKIESLRMAIRYIRHLQCLL 199
++L K+E LR AI YI L+ +L
Sbjct: 193 QRLPKVEILRSAIDYINTLERML 215
>sp|P59101|SCX_CHICK Basic helix-loop-helix transcription factor scleraxis OS=Gallus
gallus GN=SCX PE=2 SV=1
Length = 187
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 125 SGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIES 184
SG R HR E + TA RER R +N AF LR L P +P +KLSKIE+
Sbjct: 55 SGKKAGRLHR-----EPRQRHTANARERDRTNSVNTAFTALRT-LIPTEPADRKLSKIET 108
Query: 185 LRMAIRYIRHLQCLLEYG 202
LR+A YI HL +L G
Sbjct: 109 LRLASSYISHLGNVLLVG 126
>sp|P79766|NDF4_CHICK Neurogenic differentiation factor 4 OS=Gallus gallus GN=NEUROD4
PE=2 SV=1
Length = 330
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 141 RDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
R + A RERTRM +N A D LR R+ PC +KLSKIE+LR+A YI L +LE
Sbjct: 86 RARRVKANARERTRMHGLNDALDNLR-RVMPCYSKTQKLSKIETLRLARNYIWALSEVLE 144
Query: 201 YG 202
G
Sbjct: 145 TG 146
>sp|Q02346|MYOD1_RAT Myoblast determination protein 1 OS=Rattus norvegicus GN=Myod1 PE=2
SV=1
Length = 318
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKP--PGKKLSKIESLRMAI 189
C RK ++++R +K A RER R+ +N AF+ L+ C P ++L K+E LR AI
Sbjct: 101 CKRKTTNADR--RKAATMRERRRLSKVNEAFETLKR----CTSSNPNQRLPKVEILRNAI 154
Query: 190 RYIRHLQCLL---EYGPEYETILYSSRSVVPSSTNTSY 224
RYI LQ LL + P Y+ + P + Y
Sbjct: 155 RYIEGLQALLRDQDAAPPGAAAFYAPGPLPPGRGSEHY 192
>sp|Q02576|HEN1_MOUSE Helix-loop-helix protein 1 OS=Mus musculus GN=Nhlh1 PE=2 SV=1
Length = 133
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 143 YKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
Y+ RER R+ N AF LR +L P PP KKLSKIE LR+AI YI +L +L+
Sbjct: 76 YRTAHATRERIRVEAFNLAFAELR-KLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 132
>sp|O60682|MUSC_HUMAN Musculin OS=Homo sapiens GN=MSC PE=1 SV=2
Length = 206
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 137 SDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQ 196
++ ++ + A RER RMR +++AF L+ LP PP KLSK+++LR+A YI HL+
Sbjct: 102 AECKQSQRNAANARERARMRVLSKAFSRLKTSLP-WVPPDTKLSKLDTLRLASSYIAHLR 160
Query: 197 CLLE 200
LL+
Sbjct: 161 QLLQ 164
>sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio rerio GN=neurod2 PE=2
SV=1
Length = 363
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLEYGP 203
++ A RERTRM D+N A D L ++ PC +KLSKIE+LR+A YI L +L G
Sbjct: 109 RQKANARERTRMHDLNSALDNLL-KVVPCYSKTQKLSKIETLRLAKNYIWALSEILRNGK 167
Query: 204 EYETILY 210
+ + Y
Sbjct: 168 RPDVVSY 174
>sp|P22816|MYOD_DROME Myogenic-determination protein OS=Drosophila melanogaster GN=nau
PE=2 SV=3
Length = 332
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 142 DYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
D +K A RER R+R +N AF++L+ R P ++L K+E LR AI YI L+ LL+
Sbjct: 161 DRRKAATMRERRRLRKVNEAFEILKRRT--SSNPNQRLPKVEILRNAIEYIESLEDLLQ 217
>sp|P10085|MYOD1_MOUSE Myoblast determination protein 1 OS=Mus musculus GN=Myod1 PE=1 SV=2
Length = 318
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKP--PGKKLSKIESLRMAI 189
C RK ++++R +K A RER R+ +N AF+ L+ C P ++L K+E LR AI
Sbjct: 101 CKRKTTNADR--RKAATMRERRRLSKVNEAFETLKR----CTSSNPNQRLPKVEILRNAI 154
Query: 190 RYIRHLQCLL---EYGPEYETILYSSRSVVPSSTNTSY 224
RYI LQ LL + P Y+ + P + Y
Sbjct: 155 RYIEGLQALLRDQDAAPPGAAAFYAPGPLPPGRGSEHY 192
>sp|O43680|TCF21_HUMAN Transcription factor 21 OS=Homo sapiens GN=TCF21 PE=2 SV=2
Length = 179
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 119 TAPTPYSGANTTRCHRKISDSERDYKKTACD-RERTRMRDMNRAFDLLRNRLPPCKPPGK 177
T +P SG +S + ++ A + RER RMR +++AF L+ LP PP
Sbjct: 64 TKKSPLSG---------VSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV-PPDT 113
Query: 178 KLSKIESLRMAIRYIRHLQCLL 199
KLSK+++LR+A YI HL+ +L
Sbjct: 114 KLSKLDTLRLASSYIAHLRQIL 135
>sp|Q9Y4Z2|NGN3_HUMAN Neurogenin-3 OS=Homo sapiens GN=NEUROG3 PE=1 SV=2
Length = 214
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 136 ISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHL 195
+S R +K A DRER RM ++N A D LR LP P KL+KIE+LR A YI L
Sbjct: 77 LSKQRRSRRKKANDRERNRMHNLNSALDALRGVLP-TFPDDAKLTKIETLRFAHNYIWAL 135
>sp|Q5E9S3|TCF21_BOVIN Transcription factor 21 OS=Bos taurus GN=TCF21 PE=2 SV=1
Length = 179
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 136 ISDSERDYKKTACD-RERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRH 194
+S + ++ A + RER RMR +++AF L+ LP PP KLSK+++LR+A YI H
Sbjct: 72 VSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV-PPDTKLSKLDTLRLASSYIAH 130
Query: 195 LQCLL 199
L+ +L
Sbjct: 131 LRQIL 135
>sp|P13904|MYODA_XENLA Myoblast determination protein 1 homolog A OS=Xenopus laevis
GN=myod1-a PE=2 SV=1
Length = 289
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 100 PVLVEQSLVKYETPNTVTST---APTPYSGAN------TTRCHRKISDSERDYKKTACDR 150
P LV +L+K E P+ AP+ + A C RK ++++R +K A R
Sbjct: 46 PRLVHVTLLKPEEPHHNEDEHVRAPSGHHQAGRCLLWACKACKRKTTNADR--RKAATMR 103
Query: 151 ERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLL 199
ER R+ +N AF+ L+ P ++L K+E LR AIRYI LQ LL
Sbjct: 104 ERRRLSKVNEAFETLKRYT--STNPNQRLPKVEILRNAIRYIESLQALL 150
>sp|O35437|TCF21_MOUSE Transcription factor 21 OS=Mus musculus GN=Tcf21 PE=2 SV=1
Length = 179
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 136 ISDSERDYKKTACD-RERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRH 194
+S + ++ A + RER RMR +++AF L+ LP PP KLSK+++LR+A YI H
Sbjct: 72 VSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV-PPDTKLSKLDTLRLASSYIAH 130
Query: 195 LQCLL 199
L+ +L
Sbjct: 131 LRQIL 135
>sp|Q32PV5|TCF21_DANRE Transcription factor 21 OS=Danio rerio GN=tcf21 PE=2 SV=1
Length = 176
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLL 199
+ A RER RMR +++AF L+ LP PP KLSK+++LR+A YI HL+ +L
Sbjct: 78 RNAANARERARMRVLSKAFSRLKTTLPWV-PPDTKLSKLDTLRLASSYIAHLRQIL 132
>sp|Q15784|NDF2_HUMAN Neurogenic differentiation factor 2 OS=Homo sapiens GN=NEUROD2 PE=2
SV=2
Length = 382
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLEYGP 203
++ A RER RM D+N A D LR ++ PC +KLSKIE+LR+A YI L +L G
Sbjct: 123 RQKANARERNRMHDLNAALDNLR-KVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 181
Query: 204 EYETILY 210
+ + Y
Sbjct: 182 RPDLVSY 188
>sp|Q63689|NDF2_RAT Neurogenic differentiation factor 2 OS=Rattus norvegicus GN=Neurod2
PE=1 SV=2
Length = 382
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLEYGP 203
++ A RER RM D+N A D LR ++ PC +KLSKIE+LR+A YI L +L G
Sbjct: 123 RQKANARERNRMHDLNAALDNLR-KVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 181
Query: 204 EYETILY 210
+ + Y
Sbjct: 182 RPDLVSY 188
>sp|Q6GNB7|TCF21_XENLA Transcription factor 21 OS=Xenopus laevis GN=tcf21 PE=2 SV=1
Length = 179
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 122 TPYSGANTTRCHRKIS-----------DSERDYKKTACDRERTRMRDMNRAFDLLRNRLP 170
+P G T+ RK S + ++ + A RER RMR +++AF L+ LP
Sbjct: 48 SPKKGRGTSGKRRKASSKKSPLGTINQEGKQVQRNAANARERARMRVLSKAFSRLKTTLP 107
Query: 171 PCKPPGKKLSKIESLRMAIRYIRHLQCLL 199
PP KLSK+++LR+A YI HL+ +L
Sbjct: 108 WV-PPDTKLSKLDTLRLASSYIAHLRQIL 135
>sp|Q02575|HEN1_HUMAN Helix-loop-helix protein 1 OS=Homo sapiens GN=NHLH1 PE=1 SV=1
Length = 133
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 143 YKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
Y+ RER R+ N AF LR +L P PP KKLSKIE LR+AI YI +L +L+
Sbjct: 76 YRTAHATRERIRVEAFNLAFAELR-KLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 132
>sp|Q62414|NDF2_MOUSE Neurogenic differentiation factor 2 OS=Mus musculus GN=Neurod2 PE=1
SV=3
Length = 383
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLEYGP 203
++ A RER RM D+N A D LR ++ PC +KLSKIE+LR+A YI L +L G
Sbjct: 124 RQKANARERNRMHDLNAALDNLR-KVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 182
Query: 204 EYETILY 210
+ + Y
Sbjct: 183 RPDLVSY 189
>sp|Q90YI8|TAL1_TAKRU T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubripes
GN=tal1 PE=2 SV=1
Length = 371
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 150 RERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
RER R +++N AF LR +L P PP KKLSK E LR+A++YI L LLE
Sbjct: 212 RERWRQQNVNGAFAELR-KLIPTHPPDKKLSKNEILRLAMKYISFLSNLLE 261
>sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans GN=lin-32 PE=1 SV=2
Length = 142
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 66 QCLPSSMTSGQISSSTLTVLHPMEYCYPPPPLSLPVLVEQSLVKYETPNTVTSTAPTPYS 125
QC PS M G I S+ T PL P SL P+++++
Sbjct: 12 QCHPSFMYQGSIQSTMTT------------PLQSPNF---SLDSPNYPDSLSNGG----G 52
Query: 126 GANTTRCHRKISDSE---RDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKI 182
+ +C R + S R + A +RER RM +N A+D LR LP GKKLSK
Sbjct: 53 KDDKKKCRRYKTPSPQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDS-GKKLSKF 111
Query: 183 ESLRMAIRYIRHLQCLLEYGPEYETI 208
E+L+MA +YI L +L+ + E +
Sbjct: 112 ETLQMAQKYIECLSQILKQDSKNENL 137
>sp|Q64221|HEN2_MOUSE Helix-loop-helix protein 2 OS=Mus musculus GN=Nhlh2 PE=1 SV=2
Length = 135
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 150 RERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
RER R+ N AF LR +L P PP KKLSKIE LR+AI YI +L +L+
Sbjct: 85 RERIRVEAFNLAFAELR-KLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134
>sp|Q02577|HEN2_HUMAN Helix-loop-helix protein 2 OS=Homo sapiens GN=NHLH2 PE=1 SV=1
Length = 135
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 150 RERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLE 200
RER R+ N AF LR +L P PP KKLSKIE LR+AI YI +L +L+
Sbjct: 85 RERIRVEAFNLAFAELR-KLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134
>sp|A8E5T6|TCF21_XENTR Transcription factor 21 OS=Xenopus tropicalis GN=tcf21 PE=2 SV=1
Length = 179
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 144 KKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLL 199
+ A RER RMR +++AF L+ LP PP KLSK+++LR+A YI HL+ +L
Sbjct: 81 RNAANARERARMRVLSKAFSRLKTTLPWV-PPDTKLSKLDTLRLASSYIAHLRQIL 135
>sp|Q6SYV5|MYF6_TAKRU Myogenic factor 6 OS=Takifugu rubripes GN=myf6 PE=2 SV=1
Length = 239
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRY 191
C RK + ++R +K A RER R++ +N AFD L+ + P ++L K+E LR AI Y
Sbjct: 88 CKRKSAPTDR--RKAATLRERRRLKKINEAFDALKRKT--VANPNQRLPKVEILRSAISY 143
Query: 192 IRHLQCLLEYGPEYE 206
I LQ LL+ E E
Sbjct: 144 IERLQDLLQTLDEQE 158
>sp|P24899|TAL1_CHICK T-cell acute lymphocytic leukemia protein 1 homolog OS=Gallus
gallus GN=TAL1 PE=2 SV=1
Length = 311
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 121 PTPYSGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLS 180
P+PY T H K+ R + + RER R +++N AF LR +L P PP KKLS
Sbjct: 163 PSPYEMEITDGPHTKVV--RRIFTNS---RERWRQQNVNGAFAELR-KLIPTHPPDKKLS 216
Query: 181 KIESLRMAIRYIRHLQCLL 199
K E LR+A++YI L LL
Sbjct: 217 KNEILRLAMKYINFLAKLL 235
>sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1 OS=Homo sapiens GN=TAL1
PE=1 SV=2
Length = 331
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 112 TPNTVTSTAPTPYSGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPP 171
T N P+PY T H K+ R + + RER R +++N AF LR +L P
Sbjct: 162 TTNNRVKRRPSPYEMEITDGPHTKVV--RRIFTNS---RERWRQQNVNGAFAELR-KLIP 215
Query: 172 CKPPGKKLSKIESLRMAIRYIRHLQCLL 199
PP KKLSK E LR+A++YI L LL
Sbjct: 216 THPPDKKLSKNEILRLAMKYINFLAKLL 243
>sp|P21572|MYOD1_COTJA Myoblast determination protein 1 homolog OS=Coturnix coturnix
japonica GN=MYOD1 PE=2 SV=1
Length = 297
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKP--PGKKLSKIESLRMAI 189
C RK ++++R +K A RER R+ +N AF+ L+ C P ++L K+E LR AI
Sbjct: 93 CKRKTTNADR--RKAATMRERRRLSKVNEAFETLKR----CTSTNPNQRLPKVEILRNAI 146
Query: 190 RYIRHLQCLL 199
RYI LQ LL
Sbjct: 147 RYIESLQALL 156
>sp|Q9W690|MSGN1_XENLA Mesogenin-1 OS=Xenopus laevis GN=msgn1 PE=2 SV=1
Length = 173
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 125 SGANTTRCHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKK-LSKIE 183
+GA T + H + ++ A +RE+ RMR + A LRN LPP G++ L+KI+
Sbjct: 92 NGALTKKDHGHKTSMTTHRRRKASEREKLRMRAIAEALHTLRNNLPPMYSQGRQPLTKIQ 151
Query: 184 SLRMAIRYIRHLQCLLE 200
+L+ I YI L LL+
Sbjct: 152 TLKCTINYISELTNLLQ 168
>sp|P48987|ATO_DROME Protein atonal OS=Drosophila melanogaster GN=ato PE=2 SV=2
Length = 312
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 125 SGANTTRCHRKISDSERDYKKTACD-RERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIE 183
G+ R ++I+ + ++ A + RER RM+++N+AFD LR L PC ++LSK E
Sbjct: 237 GGSGKKRRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYL-PCLGNDRQLSKHE 295
Query: 184 SLRMAIRYIRHLQCLL 199
+L+MA YI L LL
Sbjct: 296 TLQMAQTYISALGDLL 311
>sp|Q7RTU5|ASCL5_HUMAN Achaete-scute homolog 5 OS=Homo sapiens GN=ASCL5 PE=3 SV=2
Length = 278
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
Query: 149 DRERTRMRDMNRAFDLLRNRLPPCKPPG----KKLSKIESLRMAIRYIRHLQCLLEYGPE 204
+RER R++ +N + LR LP G K+LSK+E+LR AIRYI++LQ LL P+
Sbjct: 162 ERERQRVKCVNEGYARLRGHLP-----GALAEKRLSKVETLRAAIRYIKYLQELLSSAPD 216
Query: 205 YET 207
T
Sbjct: 217 GST 219
>sp|Q00492|SUM1_LYTVA Transcription factor SUM-1 OS=Lytechinus variegatus GN=SUM-1 PE=2
SV=1
Length = 260
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRY 191
C RK + D +K A RER R+R +N AF+ L+ C P ++L K+E LR AI Y
Sbjct: 104 CKRK--NVAVDKRKAATLRERRRLRKVNEAFEALKRHT--CANPNQRLPKVEILRNAIEY 159
Query: 192 IRHLQCLLE 200
I L+ LL+
Sbjct: 160 IEKLERLLQ 168
>sp|P79920|NDF4_XENLA Neurogenic differentiation factor 4 OS=Xenopus laevis GN=neurod4
PE=1 SV=1
Length = 315
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 147 ACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRYIRHLQCLLEYGPEYE 206
A RER+RM +N A + LR R+ PC +KLSKIE+LR+A YI L +LE G E
Sbjct: 83 ANARERSRMHGLNDALENLR-RVMPCYSKTQKLSKIETLRLARNYIWALSDILEQGQNAE 141
>sp|P15375|MYF6_MOUSE Myogenic factor 6 OS=Mus musculus GN=Myf6 PE=2 SV=1
Length = 242
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRY 191
C RK + ++R +K A RER R++ +N AF+ L+ R P ++L K+E LR AI Y
Sbjct: 85 CKRKSAPTDR--RKAATLRERRRLKKINEAFEALKRRT--VANPNQRLPKVEILRSAISY 140
Query: 192 IRHLQCLL 199
I LQ LL
Sbjct: 141 IERLQDLL 148
>sp|P16075|MYOD1_CHICK Myoblast determination protein 1 homolog OS=Gallus gallus GN=MYOD1
PE=2 SV=2
Length = 298
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKP--PGKKLSKIESLRMAI 189
C RK ++++R +K A RER R+ +N AF+ L+ C P ++L K+E LR AI
Sbjct: 92 CKRKTTNADR--RKAATMRERRRLSKVNEAFETLKR----CTSTNPNQRLPKVEILRNAI 145
Query: 190 RYIRHLQCLL 199
RYI LQ LL
Sbjct: 146 RYIESLQALL 155
>sp|P19335|MYF6_RAT Myogenic factor 6 OS=Rattus norvegicus GN=Myf6 PE=2 SV=1
Length = 242
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKPPGKKLSKIESLRMAIRY 191
C RK + ++R +K A RER R++ +N AF+ L+ R P ++L K+E LR AI Y
Sbjct: 85 CKRKSAPTDR--RKAATLRERRRLKKINEAFEALKRRT--VANPNQRLPKVEILRSAINY 140
Query: 192 IRHLQCLL 199
I LQ LL
Sbjct: 141 IERLQDLL 148
>sp|P49811|MYOD1_PIG Myoblast determination protein 1 OS=Sus scrofa GN=MYOD1 PE=3 SV=1
Length = 319
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKP--PGKKLSKIESLRMAI 189
C RK ++++R +K A RER R+ +N AF+ L+ C P ++L K+E LR AI
Sbjct: 101 CKRKTTNADR--RKAATMRERRRLSKVNEAFETLKR----CTSSNPNQRLPKVEILRNAI 154
Query: 190 RYIRHLQCLL 199
RYI LQ LL
Sbjct: 155 RYIEGLQALL 164
>sp|P15172|MYOD1_HUMAN Myoblast determination protein 1 OS=Homo sapiens GN=MYOD1 PE=1 SV=3
Length = 320
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 132 CHRKISDSERDYKKTACDRERTRMRDMNRAFDLLRNRLPPCKP--PGKKLSKIESLRMAI 189
C RK ++++R +K A RER R+ +N AF+ L+ C P ++L K+E LR AI
Sbjct: 101 CKRKTTNADR--RKAATMRERRRLSKVNEAFETLKR----CTSSNPNQRLPKVEILRNAI 154
Query: 190 RYIRHLQCLL 199
RYI LQ LL
Sbjct: 155 RYIEGLQALL 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,176,517
Number of Sequences: 539616
Number of extensions: 3619526
Number of successful extensions: 12035
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 11539
Number of HSP's gapped (non-prelim): 564
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)