Your job contains 1 sequence.
>psy9196
DCTVNLARQFSRTCVLERRINTRRPRPPCYEKALFIEISKPKFPPNPEYLLPSHEKCQKA
RARQWLMERKGLNEENIFQNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVG
MTMLDRYGRATIEKALTNTKYISIMPLFKVSEAIIVSPEAKVDVLLKTLKKTPQLTLMAT
IVDNRLLSKTETEMYATTNLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQHSGTG
GEGGSSASEALSGSETSGGSEGEATSNEASGESQESAKAASSSDNQGEATSSNEASGESQ
ESDSAKAASSSQSPTESAPGGEVSKAASATDSQSSEAAPGDKVTDGKETPSTSDTDGDKS
SR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9196
(362 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q29NV5 - symbol:mRpL10 "39S ribosomal protein L... 278 2.6e-24 1
FB|FBgn0031231 - symbol:mRpL10 "mitochondrial ribosomal p... 270 1.8e-23 1
UNIPROTKB|Q3MHY7 - symbol:MRPL10 "39S ribosomal protein L... 129 4.6e-06 1
UNIPROTKB|H9L0I5 - symbol:MRPL10 "Uncharacterized protein... 125 1.3e-05 1
UNIPROTKB|F1RWJ0 - symbol:MRPL10 "Uncharacterized protein... 120 5.2e-05 1
MGI|MGI:1333801 - symbol:Mrpl10 "mitochondrial ribosomal ... 120 5.2e-05 1
UNIPROTKB|Q7Z7H8 - symbol:MRPL10 "39S ribosomal protein L... 114 0.00026 1
RGD|1588626 - symbol:Mrpl10 "mitochondrial ribosomal prot... 112 0.00045 1
>UNIPROTKB|Q29NV5 [details] [associations]
symbol:mRpL10 "39S ribosomal protein L10, mitochondrial"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] InterPro:IPR001790 Pfam:PF00466 GO:GO:0006412
GO:GO:0042254 GO:GO:0005762 GO:GO:0003735 EMBL:CH379058
eggNOG:NOG303354 OMA:VFPNQVL OrthoDB:EOG4VDNFJ
RefSeq:XP_001357469.1 ProteinModelPortal:Q29NV5 GeneID:4817857
KEGG:dpo:Dpse_GA11028 FlyBase:FBgn0071084 InParanoid:Q29NV5
Uniprot:Q29NV5
Length = 253
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 74/220 (33%), Positives = 110/220 (50%)
Query: 19 RINTRRPRPPCYEKALFIEISKPKFPPNPEYLLPSHEKCQKARARQWLMERKGLNEENIF 78
+IN +RP+ P YE+A + +++PK+P LP C + RA ER EN +
Sbjct: 27 KINIQRPKEPHYERARVVAVTQPKYPE-----LPKARSCFQTRA-----ERTKEQLENPY 76
Query: 79 QNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDRYGRATIEKALTN 138
I+A+E+ SQ++AI H +S+ A+ V+V + + L YGR I++A+T
Sbjct: 77 NEIIAREVRNWLNHSQLVAIFHLNSITADEIFRVRVQLHKQNLH-LKSYGRKIIDQAVTG 135
Query: 139 TKYISIMPLFKVSEAIIVSP-EAKVDVXXXXXXXXXXXXXMATIVDNRLLSKTETEMYAT 197
T Y +IMPLF + I+ SP + ++ + IV+ LLS+ E YA
Sbjct: 136 TPYEAIMPLFHSNHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQ 195
Query: 198 T-NLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
NL QA LVQT++ A L L H LV LD H
Sbjct: 196 MPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVLDVH 235
>FB|FBgn0031231 [details] [associations]
symbol:mRpL10 "mitochondrial ribosomal protein L10"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001790 Pfam:PF00466 EMBL:AE014134 GO:GO:0006412
GO:GO:0042254 GO:GO:0005762 GO:GO:0003735 CTD:124995
eggNOG:NOG303354 GeneTree:ENSGT00390000000603 OMA:VFPNQVL
EMBL:AY060877 EMBL:AY113438 RefSeq:NP_523440.1 UniGene:Dm.242
ProteinModelPortal:Q9VPL3 STRING:Q9VPL3 PaxDb:Q9VPL3 PRIDE:Q9VPL3
EnsemblMetazoa:FBtr0078124 GeneID:33182 KEGG:dme:Dmel_CG11488
FlyBase:FBgn0031231 InParanoid:Q9VPL3 OrthoDB:EOG4VDNFJ
PhylomeDB:Q9VPL3 GenomeRNAi:33182 NextBio:782308 Bgee:Q9VPL3
Uniprot:Q9VPL3
Length = 248
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 75/232 (32%), Positives = 114/232 (49%)
Query: 7 ARQFSRTCVLERRINTRRPRPPCYEKALFIEISKPKFPPNPEYLLPSHEKCQKARARQWL 66
A QF R +IN +RP+ P YE+A + +++PK+P LP + C K RA
Sbjct: 18 ALQFLR---FRGKINIQRPKAPHYERARVVAVTQPKYPE-----LPKAKSCFKTRA---- 65
Query: 67 MERKGLNEENIFQNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDR 126
ER +EN + I+A+E+ + S+++A H SS+ A+ V+V + + L
Sbjct: 66 -ERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQLHKQNLH-LKS 123
Query: 127 YGRATIEKALTNTKYISIMPLFKVSEAIIVSPEA-KVDVXXXXXXXXXXXXXMATIVDNR 185
YG IE+A+ NT+Y +I+PLF + I+ SP+ K + IV+
Sbjct: 124 YGSKIIEQAVKNTRYEAIVPLFHSNHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEET 183
Query: 186 LLSKTETEMYATT-NLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
+LS+ + YA L QA LVQT+S L QL H + V LD H
Sbjct: 184 MLSRNQLVAYAQMPGLHAVQAQLVQTLSQAPGHLIQQLQAHQNSFVQVLDVH 235
>UNIPROTKB|Q3MHY7 [details] [associations]
symbol:MRPL10 "39S ribosomal protein L10, mitochondrial"
species:9913 "Bos taurus" [GO:0003735 "structural constituent of
ribosome" evidence=IDA] [GO:0006412 "translation" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0006412 GO:GO:0042254 GO:GO:0005762 GO:GO:0003735
EMBL:BC104520 IPI:IPI00692935 IPI:IPI00829535 RefSeq:NP_001179324.1
UniGene:Bt.21070 ProteinModelPortal:Q3MHY7 STRING:Q3MHY7
PRIDE:Q3MHY7 Ensembl:ENSBTAT00000002395 GeneID:515014
KEGG:bta:515014 CTD:124995 eggNOG:NOG303354
GeneTree:ENSGT00390000000603 HOGENOM:HOG000231069
HOVERGEN:HBG080095 InParanoid:Q3MHY7 OMA:VFPNQVL OrthoDB:EOG4X0MTH
BioCyc:CATTLE:515014-MONOMER NextBio:20871622 Uniprot:Q3MHY7
Length = 262
Score = 129 (50.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 42/164 (25%), Positives = 76/164 (46%)
Query: 74 EENIFQNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDRYGRATIE 133
EE +L +EI A F +++MIA+ +M AE ++ ++ + M + ++
Sbjct: 74 EETGLIRLLRREIAAVFRDNRMIAVCQNVAMSAEDKLLMRHQLRKHKILM-KVFPNQILK 132
Query: 134 KALTNTKYISIMPLFKVSEAIIVSPEAKVDVXXXXXXXXXXXXXMATIVDNRLLSKTETE 193
L ++KY +++PLF ++VS E KV + +D+ +LS+
Sbjct: 133 PFLEDSKYQNLLPLFVGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFI 192
Query: 194 MYATT-NLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
Y+ +LA Q LV ++ + S L HH L + LDQ+
Sbjct: 193 NYSKLPSLALAQGELVGGLTLLTARTHSLLQHHPLQLTALLDQY 236
>UNIPROTKB|H9L0I5 [details] [associations]
symbol:MRPL10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GeneTree:ENSGT00390000000603 EMBL:AADN02063370
Ensembl:ENSGALT00000023247 OMA:HENSSKA Uniprot:H9L0I5
Length = 258
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/190 (20%), Positives = 86/190 (45%)
Query: 48 EYLLPSHEKCQKARARQWLMERKGLNEENIFQNILAKEILARFEESQMIAIVHRSSMLAE 107
EY+ P ++ A + +E + EE + +L +++ F +++MIA+ +SM E
Sbjct: 46 EYIAPRPAVPERCLAPRRKVEEE--EEEYGYARLLRQQVEEAFRDNRMIAVCQYNSMPGE 103
Query: 108 VNREVKVVFKRVGMTMLDRYGRATIEKALTNTKYISIMPLFKVSEAIIVSPEAKVDVXXX 167
++ ++ + + + L+ ++Y +++PLF ++VSPE K
Sbjct: 104 DMVLMRHYLRKHNIEVKFVLNEI-VRPVLSQSRYKNLLPLFVSRNILLVSPETKAKEMLR 162
Query: 168 XXXXXXXXXXMATIVDNRLLSKTETEMYATT-NLATQQALLVQTISSVATSLTSQLNHHS 226
+ +D+ +LS+ E +A +L T + + T++ + + S L H +
Sbjct: 163 VLKGVPQVNLLGACIDDTILSRQGVENFAKLPSLETSRGQTLGTLALLPSQTCSMLQHAA 222
Query: 227 TTLVSYLDQH 236
L + L+ H
Sbjct: 223 AHLAALLEGH 232
>UNIPROTKB|F1RWJ0 [details] [associations]
symbol:MRPL10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005739
GO:GO:0042254 GO:GO:0005840 GeneTree:ENSGT00390000000603
OMA:VFPNQVL EMBL:CU655852 RefSeq:XP_003131579.1 UniGene:Ssc.3709
Ensembl:ENSSSCT00000019073 GeneID:100518988 KEGG:ssc:100518988
Uniprot:F1RWJ0
Length = 262
Score = 120 (47.3 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/164 (24%), Positives = 74/164 (45%)
Query: 74 EENIFQNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDRYGRATIE 133
EE +L +EI A F +++MIA+ ++ AE ++ ++ + M + ++
Sbjct: 74 EETGLVRLLRREIAAVFRDNRMIAVCQHVALSAEDKLLLRHQLRKHKILM-KIFPNQVLK 132
Query: 134 KALTNTKYISIMPLFKVSEAIIVSPEAKVDVXXXXXXXXXXXXXMATIVDNRLLSKTETE 193
L +KY +++PLF ++VS E KV + +D+ +LS+
Sbjct: 133 PFLEESKYQNLLPLFVGHNLLLVSEEPKVKEMVRILKGIPFLPLLGGCIDDTILSRQGFI 192
Query: 194 MYATT-NLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
Y+ +LA Q LV ++ + S L H L + LDQ+
Sbjct: 193 NYSKLPSLALVQGELVGGLTFLTAQTYSMLQHQPRQLTALLDQY 236
>MGI|MGI:1333801 [details] [associations]
symbol:Mrpl10 "mitochondrial ribosomal protein L10"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] MGI:MGI:1333801 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 CTD:124995 eggNOG:NOG303354
GeneTree:ENSGT00390000000603 HOGENOM:HOG000231069
HOVERGEN:HBG080095 OMA:VFPNQVL OrthoDB:EOG4X0MTH EMBL:AK002865
EMBL:AK007643 EMBL:AK150774 EMBL:AK171028 EMBL:BC016219
IPI:IPI00132412 RefSeq:NP_080430.1 UniGene:Mm.208946
ProteinModelPortal:Q3TBW2 SMR:Q3TBW2 STRING:Q3TBW2
PhosphoSite:Q3TBW2 PaxDb:Q3TBW2 PRIDE:Q3TBW2
Ensembl:ENSMUST00000001485 GeneID:107732 KEGG:mmu:107732
InParanoid:Q3TBW2 NextBio:359336 Bgee:Q3TBW2 CleanEx:MM_MRPL10
Genevestigator:Q3TBW2 Uniprot:Q3TBW2
Length = 262
Score = 120 (47.3 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/164 (24%), Positives = 75/164 (45%)
Query: 74 EENIFQNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDRYGRATIE 133
EE+ +L ++I+A F +++MIA+ ++ AE ++ ++ + + + ++
Sbjct: 74 EESGLVRLLRQDIVAVFRDNRMIAVCQNVALSAEDKLLLRHQLRKHKI-FIKVFPSQVLK 132
Query: 134 KALTNTKYISIMPLFKVSEAIIVSPEAKVDVXXXXXXXXXXXXXMATIVDNRLLSKTETE 193
L N+KY +++PLF ++VS E KV + VD+ +LS+
Sbjct: 133 PFLENSKYRNLLPLFVGHNLLLVSEEPKVKEMVRVLKSVPFLPLLGGCVDDTILSRQGLV 192
Query: 194 MYATT-NLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
YA +L Q LV ++ + L H L S LDQ+
Sbjct: 193 DYAKLPSLDQLQGQLVGGLTHLMAQTRYLLQHQPVQLTSLLDQY 236
>UNIPROTKB|Q7Z7H8 [details] [associations]
symbol:MRPL10 "39S ribosomal protein L10, mitochondrial"
species:9606 "Homo sapiens" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0006412
GO:GO:0042254 GO:GO:0005762 GO:GO:0003735 EMBL:CH471109 CTD:124995
eggNOG:NOG303354 HOGENOM:HOG000231069 HOVERGEN:HBG080095
OMA:VFPNQVL OrthoDB:EOG4X0MTH EMBL:AK127167 EMBL:AC003665
EMBL:BC015904 EMBL:BC052601 EMBL:AB051618 IPI:IPI00170877
IPI:IPI00376448 RefSeq:NP_660298.2 RefSeq:NP_683685.1
UniGene:Hs.347535 ProteinModelPortal:Q7Z7H8 DIP:DIP-59717N
IntAct:Q7Z7H8 MINT:MINT-1410295 STRING:Q7Z7H8 PhosphoSite:Q7Z7H8
DMDM:215274216 PaxDb:Q7Z7H8 PRIDE:Q7Z7H8 DNASU:124995
Ensembl:ENST00000290208 Ensembl:ENST00000351111
Ensembl:ENST00000414011 GeneID:124995 KEGG:hsa:124995
UCSC:uc002ilz.3 GeneCards:GC17M045900 HGNC:HGNC:14055 HPA:HPA021234
MIM:611825 neXtProt:NX_Q7Z7H8 PharmGKB:PA30939 ChiTaRS:MRPL10
GenomeRNAi:124995 NextBio:81460 ArrayExpress:Q7Z7H8 Bgee:Q7Z7H8
CleanEx:HS_MRPL10 Genevestigator:Q7Z7H8 Uniprot:Q7Z7H8
Length = 261
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 81 ILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDRYGRATIEKALTNTK 140
+L +EI A F++++MIA+ ++ AE ++ ++ + M + ++ L ++K
Sbjct: 81 LLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILM-KVFPNQVLKPFLEDSK 139
Query: 141 YISIMPLFKVSEAIIVSPEAKVDVXXXXXXXXXXXXXMATIVDNRLLSKTETEMYATT-N 199
Y +++PLF ++VS E KV + +D+ +LS+ Y+ +
Sbjct: 140 YQNLLPLFVGHNMLLVSEEPKVKEMVRILRTVPFLPLLGGCIDDTILSRQGFINYSKLPS 199
Query: 200 LATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
L Q LV ++ + S L H L + LDQ+
Sbjct: 200 LPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQY 236
>RGD|1588626 [details] [associations]
symbol:Mrpl10 "mitochondrial ribosomal protein L10"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] RGD:1588626 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 eggNOG:NOG303354
GeneTree:ENSGT00390000000603 HOGENOM:HOG000231069
HOVERGEN:HBG080095 EMBL:AABR03074063 IPI:IPI00203438
UniGene:Rn.204813 ProteinModelPortal:P0C2C4 STRING:P0C2C4
PhosphoSite:P0C2C4 PRIDE:P0C2C4 Ensembl:ENSRNOT00000065555
UCSC:RGD:1588626 InParanoid:P0C2C4 ArrayExpress:P0C2C4
Genevestigator:P0C2C4 Uniprot:P0C2C4
Length = 263
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 38/164 (23%), Positives = 74/164 (45%)
Query: 74 EENIFQNILAKEILARFEESQMIAIVHRSSMLAEVNREVKVVFKRVGMTMLDRYGRATIE 133
EE+ +L ++I A F +++MIA+ ++ AE ++ ++ + + + ++
Sbjct: 75 EESGLIRLLRRDIAAVFRDNRMIAVCQNVALSAEDKLLLRHQLRKHKI-FIKVFPSQVLK 133
Query: 134 KALTNTKYISIMPLFKVSEAIIVSPEAKVDVXXXXXXXXXXXXXMATIVDNRLLSKTETE 193
L ++KY +++PLF ++VS E KV + +D+ +LS+
Sbjct: 134 PFLEDSKYQNLLPLFVGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFV 193
Query: 194 MYATT-NLATQQALLVQTISSVATSLTSQLNHHSTTLVSYLDQH 236
YA +L Q LV ++ + L H L S LDQ+
Sbjct: 194 EYAKLPSLDRLQGELVGGLTHLTAQTRYLLQHQPVQLTSLLDQY 237
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.125 0.342 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 362 286 0.00086 115 3 11 23 0.43 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 595 (63 KB)
Total size of DFA: 178 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.23u 0.09s 22.32t Elapsed: 00:00:20
Total cpu time: 22.23u 0.09s 22.32t Elapsed: 00:00:20
Start: Thu Aug 15 11:28:10 2013 End: Thu Aug 15 11:28:30 2013