BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9197
(154 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PFV|A Chain A, Crystal Structure Of Cbl-B Tkb Domain In Complex With Egfr
Py1069 Peptide
pdb|3PFV|B Chain B, Crystal Structure Of Cbl-B Tkb Domain In Complex With Egfr
Py1069 Peptide
Length = 315
Score = 218 bits (556), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 101/151 (66%), Positives = 129/151 (85%), Gaps = 2/151 (1%)
Query: 5 KLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYED--K 62
+ A D+RT++KTWKLMDKVV+LCQ+PK+ LKNSPP++LDILPDTYQ L+LI +KY+D K
Sbjct: 2 QAAADRRTVEKTWKLMDKVVRLCQNPKLQLKNSPPYILDILPDTYQHLRLILSKYDDNQK 61
Query: 63 MIVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSEL 122
+ L NE+F ++I +LM+K K+AI+LFKEGKE+MY+E S RRNLTKLSL+FSHML+E+
Sbjct: 62 LAQLSENEYFKIYIDSLMKKSKRAIRLFKEGKERMYEEQSQDRRNLTKLSLIFSHMLAEI 121
Query: 123 KAIFPNGVFAGDQFRITKSDAADFWRNNFGN 153
KAIFPNG F GD FRITK+DAA+FWR FG+
Sbjct: 122 KAIFPNGQFQGDNFRITKADAAEFWRKFFGD 152
>pdb|3VGO|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Cbl-B
pdb|3VGO|B Chain B, Crystal Structure Of The N-Terminal Fragment Of Cbl-B
pdb|3VGO|C Chain C, Crystal Structure Of The N-Terminal Fragment Of Cbl-B
Length = 394
Score = 217 bits (553), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/149 (67%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Query: 7 ATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYED--KMI 64
A D+RT++KTWKLMDKVV+LCQ+PK+ LKNSPP++LDILPDTYQ L+LI +KY+D K+
Sbjct: 8 AADRRTVEKTWKLMDKVVRLCQNPKLQLKNSPPYILDILPDTYQHLRLILSKYDDNQKLA 67
Query: 65 VLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKA 124
L NE+F ++I +LM+K K+AI+LFKEGKE+MY+E S RRNLTKLSL+FSHML+E+KA
Sbjct: 68 QLSENEYFKIYIDSLMKKSKRAIRLFKEGKERMYEEQSQDRRNLTKLSLIFSHMLAEIKA 127
Query: 125 IFPNGVFAGDQFRITKSDAADFWRNNFGN 153
IFPNG F GD FRITK+DAA+FWR FG+
Sbjct: 128 IFPNGQFQGDNFRITKADAAEFWRKFFGD 156
>pdb|4A4B|A Chain A, Structure Of Modified Phosphotyr371-C-Cbl-Ubch5b-Zap-70
Complex
Length = 391
Score = 215 bits (547), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 122/150 (81%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM
Sbjct: 3 PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKM 62
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK
Sbjct: 63 ETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELK 122
Query: 124 AIFPNGVFAGDQFRITKSDAADFWRNNFGN 153
IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 123 GIFPSGLFQGDTFRITKADAAEFWRKAFGE 152
>pdb|1FBV|A Chain A, Structure Of A Cbl-Ubch7 Complex: Ring Domain Function In
Ubiquitin-Protein Ligases
Length = 388
Score = 215 bits (547), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 122/150 (81%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM
Sbjct: 1 PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKM 60
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK
Sbjct: 61 ETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELK 120
Query: 124 AIFPNGVFAGDQFRITKSDAADFWRNNFGN 153
IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 121 GIFPSGLFQGDTFRITKADAAEFWRKAFGE 150
>pdb|2CBL|A Chain A, N-Terminal Domain Of Cbl In Complex With Its Binding Site
On Zap-70
Length = 305
Score = 215 bits (547), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 122/149 (81%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM
Sbjct: 1 PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKM 60
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK
Sbjct: 61 ETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELK 120
Query: 124 AIFPNGVFAGDQFRITKSDAADFWRNNFG 152
IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 121 GIFPSGLFQGDTFRITKADAAEFWRKAFG 149
>pdb|2Y1M|A Chain A, Structure Of Native C-Cbl
pdb|2Y1M|B Chain B, Structure Of Native C-Cbl
pdb|2Y1M|C Chain C, Structure Of Native C-Cbl
pdb|2Y1M|D Chain D, Structure Of Native C-Cbl
pdb|2Y1M|E Chain E, Structure Of Native C-Cbl
pdb|2Y1M|F Chain F, Structure Of Native C-Cbl
pdb|2Y1N|A Chain A, Structure Of C-Cbl-Zap-70 Peptide Complex
pdb|2Y1N|C Chain C, Structure Of C-Cbl-Zap-70 Peptide Complex
Length = 389
Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 122/150 (81%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM
Sbjct: 1 PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKM 60
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK
Sbjct: 61 ETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELK 120
Query: 124 AIFPNGVFAGDQFRITKSDAADFWRNNFGN 153
IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 121 GIFPSGLFQGDTFRITKADAAEFWRKAFGE 150
>pdb|4A4C|A Chain A, Structure Of Phosphotyr371-C-Cbl-Ubch5b-Zap-70 Complex
Length = 391
Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 122/150 (81%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM
Sbjct: 3 PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKM 62
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK
Sbjct: 63 ETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELK 122
Query: 124 AIFPNGVFAGDQFRITKSDAADFWRNNFGN 153
IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 123 GIFPSGLFQGDTFRITKADAAEFWRKAFGE 152
>pdb|1B47|A Chain A, Structure Of The N-Terminal Domain Of Cbl In Complex With
Its Binding Site In Zap-70
pdb|1B47|B Chain B, Structure Of The N-Terminal Domain Of Cbl In Complex With
Its Binding Site In Zap-70
pdb|1B47|C Chain C, Structure Of The N-Terminal Domain Of Cbl In Complex With
Its Binding Site In Zap-70
Length = 304
Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 122/149 (81%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM
Sbjct: 1 PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKM 60
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK
Sbjct: 61 ETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELK 120
Query: 124 AIFPNGVFAGDQFRITKSDAADFWRNNFG 152
IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 121 GIFPSGLFQGDTFRITKADAAEFWRKAFG 149
>pdb|1YVH|A Chain A, Crystal Structure Of The C-Cbl Tkb Domain In Complex With
The Aps Ptyr-618 Phosphopeptide
pdb|3BUM|B Chain B, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In Sprouty2
pdb|3BUN|B Chain B, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In Sprouty4
pdb|3BUO|B Chain B, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In Egf Receptor'
pdb|3BUO|D Chain D, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In Egf Receptor'
pdb|3BUW|B Chain B, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In Syk
pdb|3BUW|D Chain D, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In Syk
pdb|3BUX|B Chain B, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In C-Met
pdb|3BUX|D Chain D, Crystal Structure Of C-Cbl-Tkb Domain Complexed With Its
Binding Motif In C-Met
pdb|3OB1|B Chain B, Crystal Structure Of C-Cbl Tkb Domain In Complex With
Double Phosphorylated Spry2 Peptide
pdb|3OB2|B Chain B, Crystal Structure Of C-Cbl Tkb Domain In Complex With
Double Phosphorylated Egfr Peptide
pdb|3PLF|B Chain B, Reverse Binding Mode Of Metrd Peptide Complexed With C-Cbl
Tkb Domain
pdb|3PLF|D Chain D, Reverse Binding Mode Of Metrd Peptide Complexed With C-Cbl
Tkb Domain
Length = 329
Score = 214 bits (544), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 121/146 (82%)
Query: 7 ATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKMIVL 66
DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM L
Sbjct: 28 TVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKMETL 87
Query: 67 HNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKAIF 126
NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK IF
Sbjct: 88 GENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF 147
Query: 127 PNGVFAGDQFRITKSDAADFWRNNFG 152
P+G+F GD FRITK+DAA+FWR FG
Sbjct: 148 PSGLFQGDTFRITKADAAEFWRKAFG 173
>pdb|3OP0|A Chain A, Crystal Structure Of Cbl-C (Cbl-3) Tkb Domain In Complex
With Egfr Py1069 Peptide
pdb|3OP0|B Chain B, Crystal Structure Of Cbl-C (Cbl-3) Tkb Domain In Complex
With Egfr Py1069 Peptide
Length = 323
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 12/154 (7%)
Query: 9 DKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLK-LIYTKYEDKMIVLH 67
+ R L + +++ ++ + C P++++ SPP L D+LP T Q L+ + +++ E
Sbjct: 7 EARALGRAVRMLQRLEEQCVDPRLSV--SPPSLRDLLPRTAQLLREVAHSRREAGGGGPG 64
Query: 68 NN----EFFNVFIVNLMRKCKQAIKLF-----KEGKEKMYDESSHYRRNLTKLSLVFSHM 118
+F +++ NL K +Q L + ++++ S RR L KL+++FSHM
Sbjct: 65 GPGGSGDFLLIYLANLEAKSRQVAALLPPRGRRSANDELFRAGSRLRRQLAKLAIIFSHM 124
Query: 119 LSELKAIFPNGVFAGDQFRITKSDAADFWRNNFG 152
+EL A+FP G + G +++TK+ A FWR + G
Sbjct: 125 HAELHALFPGGKYCGHMYQLTKAPAHTFWRESCG 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,505,841
Number of Sequences: 62578
Number of extensions: 163748
Number of successful extensions: 398
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 385
Number of HSP's gapped (non-prelim): 15
length of query: 154
length of database: 14,973,337
effective HSP length: 90
effective length of query: 64
effective length of database: 9,341,317
effective search space: 597844288
effective search space used: 597844288
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)