BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9199
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DIY4|TBPL1_XENTR TATA box-binding protein-like protein 1 OS=Xenopus tropicalis
GN=tbpl1 PE=2 SV=1
Length = 186
Score = 213 bits (543), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DIII NVVC F RCHLNLR+IAL G+NV Y+RE G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDIIITNVVCVFRTRCHLNLRKIALEGLNVIYKREVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K+ ARR AR LQ+LGF+ +FT F+VVNVL C+MPF IR+ +F++++R
Sbjct: 66 IICTGATSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLAEFTKQNR 125
Query: 159 -AAEYEPELHPGVTYRITRPKATLKIFSTGGITVTA 193
A YEPELHP V YRI + TL+IFSTG ITVT
Sbjct: 126 PHASYEPELHPAVCYRIKSLRTTLQIFSTGSITVTG 161
>sp|Q5U385|TBPL1_DANRE TATA box-binding protein-like protein 1 OS=Danio rerio GN=tbpl1
PE=2 SV=1
Length = 186
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/161 (60%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Query: 36 PAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWS 95
P++D +DII+ NVV F RCHLNLR I L G NV Y+ E G V MKLRKP TASIWS
Sbjct: 3 PSNDVALDIIVTNVVSVFRTRCHLNLRTIGLEGTNVIYKPEVGKVLMKLRKPRITASIWS 62
Query: 96 SGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSE 155
SGKI CTGATSE+++K+ ARR ARCLQ++GFK RF++F+VVNVL CSMPF IR+++F++
Sbjct: 63 SGKIICTGATSEEEAKLGARRLARCLQKMGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTK 122
Query: 156 KHR-AAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
+R A YEPELHP +YRI ++T+++FSTG ITVT N
Sbjct: 123 NNRPIASYEPELHPAASYRIKNLRSTVQVFSTGNITVTGPN 163
>sp|Q9W6Z2|TBPL1_XENLA TATA box-binding protein-like protein 1 OS=Xenopus laevis GN=tbpl1
PE=2 SV=1
Length = 186
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G+NV Y+RE V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGLNVIYKREVSKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K+ ARR AR LQ+LGF+ +FT F+VVNVL C+MPF IR+ +F++++R
Sbjct: 66 IICTGATSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLNEFTKQNR 125
Query: 159 -AAEYEPELHPGVTYRITRPKATLKIFSTGGITVTA 193
A YEPELHP V YRI +ATL+IFSTG ITVT
Sbjct: 126 PHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>sp|Q9YGV8|TBPL1_CHICK TATA box-binding protein-like protein 1 OS=Gallus gallus GN=TBPL1
PE=2 SV=1
Length = 183
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G NV Y+R+ G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
+ CTGATSE+++K ARR ARCLQ+LGF+ FT+F+VVNVL C+MPF IR+ +F++ +R
Sbjct: 66 VICTGATSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
Query: 159 A-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
A YEPELHP V YRI +ATL+IFSTG ITVT N
Sbjct: 126 PHASYEPELHPAVCYRIKTLRATLQIFSTGSITVTGPN 163
>sp|Q5R7U8|TBPL1_PONAB TATA box-binding protein-like protein 1 OS=Pongo abelii GN=TBPL1
PE=2 SV=1
Length = 190
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G NV Y+R+ G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K ARR AR LQ+LGF+ FT+F+VVNVL C+MPF IR+ +F++ +R
Sbjct: 66 IICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
Query: 159 A-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
A YEPELHP V YRI +ATL+IFSTG ITVT N
Sbjct: 126 PHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPN 163
>sp|P62340|TBPL1_MOUSE TATA box-binding protein-like protein 1 OS=Mus musculus GN=Tbpl1
PE=2 SV=1
Length = 186
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G NV Y+R+ G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K ARR AR LQ+LGF+ FT+F+VVNVL C+MPF IR+ +F++ +R
Sbjct: 66 IICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
Query: 159 A-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
A YEPELHP V YRI +ATL+IFSTG ITVT N
Sbjct: 126 PHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPN 163
>sp|Q4R848|TBPL1_MACFA TATA box-binding protein-like protein 1 OS=Macaca fascicularis
GN=TBPL1 PE=2 SV=1
Length = 186
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G NV Y+R+ G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K ARR AR LQ+LGF+ FT+F+VVNVL C+MPF IR+ +F++ +R
Sbjct: 66 IICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
Query: 159 A-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
A YEPELHP V YRI +ATL+IFSTG ITVT N
Sbjct: 126 PHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPN 163
>sp|P62380|TBPL1_HUMAN TATA box-binding protein-like protein 1 OS=Homo sapiens GN=TBPL1
PE=1 SV=1
Length = 186
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G NV Y+R+ G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K ARR AR LQ+LGF+ FT+F+VVNVL C+MPF IR+ +F++ +R
Sbjct: 66 IICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
Query: 159 A-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
A YEPELHP V YRI +ATL+IFSTG ITVT N
Sbjct: 126 PHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPN 163
>sp|Q32LB1|TBPL1_BOVIN TATA box-binding protein-like protein 1 OS=Bos taurus GN=TBPL1 PE=2
SV=1
Length = 186
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 39 DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYRRENGMVTMKLRKPYTTASIWSSGK 98
D +DI+I NVVC F RCHLNLR+IAL G NV Y+R+ G V MKLRKP TA+IWSSGK
Sbjct: 6 DVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGK 65
Query: 99 ITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHR 158
I CTGATSE+++K ARR AR LQ+LGF+ FT+F+VVNVL C+MPF IR+ +F++ +R
Sbjct: 66 IICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
Query: 159 A-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
A YEPELHP V YRI +ATL+IFSTG ITVT N
Sbjct: 126 PHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPN 163
>sp|Q6SJ95|TBPL2_MOUSE TATA box-binding protein-like protein 2 OS=Mus musculus GN=Tbpl2
PE=1 SV=1
Length = 350
Score = 156 bits (394), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 124/198 (62%), Gaps = 8/198 (4%)
Query: 11 SSHSEQEPP--PTQTVVPIQNHAPPQPPAHDPEVDIII---NNVVCSFSVRCHLNLRQIA 65
+HS Q P P +P+ A P P I+ NVV + ++ C L+LR+IA
Sbjct: 136 DAHSNQPSPETPNSNALPVALIASMMPMNPVPGFSGIVPQLQNVVSTANLACKLDLRKIA 195
Query: 66 LNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRL 124
LN N EY + V M++R+P TTA I+SSGK+ CTGA SE++S++AAR+YAR +Q+L
Sbjct: 196 LNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVVCTGAKSEEESRLAARKYARVVQKL 255
Query: 125 GFKARFTNFRVVNVLGTCSMPFAIR--ILQFSEKHRAAEYEPELHPGVTYRITRPKATLK 182
GF RF NF++ N++G+C + F IR IL + + ++ YEPEL PG+ Y++ +P+ L
Sbjct: 256 GFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQFSSSYEPELFPGLIYKMVKPQVVLL 315
Query: 183 IFSTGGITVTACNDSNKI 200
IF++G + +T + ++I
Sbjct: 316 IFASGKVVLTGAKERSEI 333
>sp|A6H909|TBPL2_RAT TATA box-binding protein-like protein 2 OS=Rattus norvegicus
GN=Tbpl2 PE=2 SV=1
Length = 344
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ NVV + ++ C L+LR+IALN N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 171 LQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVVCTGA 230
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SED+S++AAR+YAR +Q+LGF RF NF++ N++ +C + F IR+ + HR + YE
Sbjct: 231 KSEDESRLAARKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRLEILALTHRQFSSYE 290
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ Y++ +P+ L IF++G + +T + ++I
Sbjct: 291 PELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEI 327
>sp|P20227|TBP_DROME TATA-box-binding protein OS=Drosophila melanogaster GN=Tbp PE=1
SV=1
Length = 353
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 22 QTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMV 80
QT+ P P P + DP + + N+V + ++ C L+L++IAL+ N EY + V
Sbjct: 155 QTMGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAV 214
Query: 81 TMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLG 140
M++R+P TTA I+SSGK+ CTGA SED S++AAR+YAR +Q+LGF A+F +F++ N++G
Sbjct: 215 IMRIREPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVG 274
Query: 141 TCSMPFAIRILQFSEKH-RAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACNDSNK 199
+C + F IR+ H + YEPEL PG+ YR+ RP+ L IF +G + +T +
Sbjct: 275 SCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQE 334
Query: 200 I 200
I
Sbjct: 335 I 335
>sp|O45211|TBP_BOMMO TATA-box-binding protein OS=Bombyx mori GN=Tbp PE=2 SV=1
Length = 307
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 122/202 (60%), Gaps = 11/202 (5%)
Query: 1 MTTAGMTTTHSSHSEQEPPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLN 60
M AG ++ S+ P P + P+ + DP + + N+V + ++ C L+
Sbjct: 98 MIAAGNLSSQQMLSQASPAPMTPLTPL---------SADPGILPQLQNIVSTVNLDCKLD 148
Query: 61 LRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYAR 119
L++IAL+ N EY + V M++R+P TTA I+SSGK+ CTGA SE+ S++AAR+YAR
Sbjct: 149 LKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYAR 208
Query: 120 CLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKH-RAAEYEPELHPGVTYRITRPK 178
+Q+LGF A+F +F++ N++G+C + F IR+ H + + YEPEL PG+ YR+ +P+
Sbjct: 209 IIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPR 268
Query: 179 ATLKIFSTGGITVTACNDSNKI 200
L IF +G + +T +I
Sbjct: 269 IVLLIFVSGKVVLTGAKVREEI 290
>sp|P48511|TBP_MESCR TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1
Length = 200
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 27 IQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLR 85
++ P P H + + N+V + ++ C L+L+ IAL N EY + V M++R
Sbjct: 6 LEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIR 65
Query: 86 KPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMP 145
+P TTA I++SGK+ CTGA SE QSK+AAR+YAR +Q+LGF A+F +F++ N++G+C +
Sbjct: 66 EPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVK 125
Query: 146 FAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
F IR+ + H A + YEPEL PG+ YR+ +PK L IF +G I +T
Sbjct: 126 FPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176
Score = 34.3 bits (77), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 86
Query: 197 SNK 199
+
Sbjct: 87 EQQ 89
>sp|P53361|TBP_SPOFR TATA-box-binding protein OS=Spodoptera frugiperda GN=Tbp PE=2 SV=1
Length = 307
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 120/202 (59%), Gaps = 11/202 (5%)
Query: 1 MTTAGMTTTHSSHSEQEPPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLN 60
M T+G S+ P P P P + DP + + N+V + ++ C L+
Sbjct: 98 MITSGSLAGQQMLSQASPAPM---------TPMTPHSADPGIVPQLQNIVSTVNLNCKLD 148
Query: 61 LRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYAR 119
L++IAL+ N EY + V M++R+P TTA I+SSGK+ CTGA SE+ S++AAR+YAR
Sbjct: 149 LKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYAR 208
Query: 120 CLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKH-RAAEYEPELHPGVTYRITRPK 178
+Q+LGF A+F +F++ N++G+C + F IR+ H + + YEPEL PG+ YR+ +P+
Sbjct: 209 IIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPR 268
Query: 179 ATLKIFSTGGITVTACNDSNKI 200
L IF +G + +T +I
Sbjct: 269 IVLLIFVSGKVVLTGAKVREEI 290
>sp|Q6SJ96|TBPL2_HUMAN TATA box-binding protein-like protein 2 OS=Homo sapiens GN=TBPL2
PE=2 SV=1
Length = 375
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L++IAL+ N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF ARF +F++ N++G+C + F IR+ H+ + YE
Sbjct: 262 KSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 321
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T + ++I
Sbjct: 322 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEI 358
>sp|Q12731|TBP_EMENI TATA-box-binding protein OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tbpA PE=2
SV=1
Length = 268
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 35 PPAHDPEVDII--INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTA 91
P A P I+ + N+V + ++ C L+L+ IAL+ N EY + V M++R+P TTA
Sbjct: 82 PGASAPGSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTA 141
Query: 92 SIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRIL 151
I++SGK+ TGA SED SK+A+R+YAR +Q+LGF A+FT+F++ N++G+C + F IR+
Sbjct: 142 LIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLE 201
Query: 152 QFSEK-HRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTAC 194
+ + H + YEPEL PG+ YR+ +PK L IF +G I +T
Sbjct: 202 GLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGA 245
>sp|P26357|TBP_SOLTU TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1
Length = 200
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 25 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 84
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE QSK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 85 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYAHGAFSSYE 144
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 145 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 176
Score = 34.3 bits (77), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 86
Query: 197 SNK 199
+
Sbjct: 87 EQQ 89
>sp|P50158|TBP1_MAIZE TATA-box-binding protein 1 OS=Zea mays GN=TBP1 PE=2 SV=1
Length = 200
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 25 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 84
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE QSK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 85 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 144
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 145 PELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 86
Query: 197 SNK 199
+
Sbjct: 87 EQQ 89
>sp|O17488|TBP_ARTSF TATA-box-binding protein OS=Artemia franciscana PE=2 SV=1
Length = 275
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 113/174 (64%), Gaps = 4/174 (2%)
Query: 31 APPQPPAH--DPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKP 87
A P PA DP + ++ N+V + ++ C L+L++IAL N EY + V M++R+P
Sbjct: 86 ATPHTPASVADPGIIPVLENIVSTVNLGCRLDLKKIALQARNAEYNPKRFAAVIMRIREP 145
Query: 88 YTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFA 147
TTA I+SSGK+ CTGA SE+ S++AAR+YAR +Q+LGF A+F +F++ N++G+C + F
Sbjct: 146 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIVQKLGFSAKFLDFKIQNMVGSCDVKFP 205
Query: 148 IRILQFSEKH-RAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
IR+ H + + YEPEL PG+ YR+ +P+ L IF +G + +T +I
Sbjct: 206 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEI 259
>sp|P50159|TBP2_MAIZE TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1
Length = 200
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 25 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 84
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE QSK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 85 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 144
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 145 PELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 86
Query: 197 SNK 199
+
Sbjct: 87 EQQ 89
>sp|Q8W0W4|TBP2_ORYSJ TATA-binding protein 2 OS=Oryza sativa subsp. japonica GN=TBP2 PE=1
SV=2
Length = 203
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 28 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 87
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE QSK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 88 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 147
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 148 PELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 179
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 30 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 89
Query: 197 SNK 199
+
Sbjct: 90 EQQ 92
>sp|Q42808|TBP_SOYBN TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1
Length = 200
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R P TTA I++SGK+ CTGA
Sbjct: 25 LQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGA 84
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE QSK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 85 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 144
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 145 PELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAKS 86
Query: 197 SNK 199
+
Sbjct: 87 EQQ 89
>sp|P93348|TBP_TOBAC TATA-box-binding protein OS=Nicotiana tabacum PE=2 SV=1
Length = 200
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 25 VPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMK 83
V ++ + P H + + N+V + ++ C L+L+ IAL N EY + V M+
Sbjct: 4 VGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMR 63
Query: 84 LRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCS 143
+R+P TTA I++SGK+ CTGA SE SK+AAR+YAR +Q+LGF A+F +F++ N++G+C
Sbjct: 64 IREPKTTALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCD 123
Query: 144 MPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
+ F IR+ + H A + YEPEL PG+ YR+ +PK L IF +G I +T
Sbjct: 124 VKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 176
>sp|Q5UE94|TBPL2_XENLA TATA box-binding protein-like protein 2 OS=Xenopus laevis GN=tbpl2
PE=2 SV=1
Length = 320
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L++IAL+ N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 146 LQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 205
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 206 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 265
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T + ++I
Sbjct: 266 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEI 302
>sp|Q28DH2|TBPL2_XENTR TATA box-binding protein-like protein 2 OS=Xenopus tropicalis
GN=tbpl2 PE=2 SV=1
Length = 322
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L++IAL+ N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 148 LQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 207
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 208 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 267
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T + ++I
Sbjct: 268 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEI 304
>sp|P28147|TBP1_ARATH TATA-box-binding protein 1 OS=Arabidopsis thaliana GN=TBP1 PE=1
SV=1
Length = 200
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 25 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 84
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SED SK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 85 KSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYE 144
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ PK L IF +G I +T
Sbjct: 145 PELFPGLIYRMKVPKIVLLIFVSGKIVITGAK 176
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 86
Query: 197 SN 198
+
Sbjct: 87 ED 88
>sp|P26356|TBP1_WHEAT TATA-box-binding protein 1 OS=Triticum aestivum GN=TBP1 PE=2 SV=1
Length = 233
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
Query: 45 IINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTG 103
++ N+V + ++ C L+L+QIAL N EY + V M++R P TTA I++SGK+ CTG
Sbjct: 57 VLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTG 116
Query: 104 ATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEY 162
A SE+ SK+AAR+YAR +Q+LGF A F +F++ N++ +C + F IR+ + H A + Y
Sbjct: 117 AKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGAFSSY 176
Query: 163 EPELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
EPEL PG+ YR+ +PK L +F +G I +T ++I
Sbjct: 177 EPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEI 214
>sp|P91809|TBP_STRPU TATA-box-binding protein OS=Strongylocentrotus purpuratus PE=2 SV=1
Length = 265
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 116/187 (62%), Gaps = 6/187 (3%)
Query: 20 PTQTVVPIQNHAP--PQPPAHDPEVDII--INNVVCSFSVRCHLNLRQIALNGVNVEYR- 74
P + +P AP P PA I+ + N+V + ++ C L+L++IAL+ N EY
Sbjct: 61 PGSSFIPPSPMAPLTPATPASSESSGIVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNP 120
Query: 75 RENGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFR 134
+ V M++R+P TTA I+SSGK+ CTGA ED S++AAR+YAR +Q+LGF A+F +F+
Sbjct: 121 KRFAAVIMRIREPRTTALIFSSGKMVCTGAKREDNSRLAARKYARVVQKLGFAAKFLDFK 180
Query: 135 VVNVLGTCSMPFAIRILQFSEKH-RAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTA 193
+ N++G+C + F IR+ H + + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 181 IQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 240
Query: 194 CNDSNKI 200
+I
Sbjct: 241 AKVRQEI 247
>sp|A6H907|TBPL2_PANTR TATA box-binding protein-like protein 2 OS=Pan troglodytes GN=TBPL2
PE=2 SV=1
Length = 376
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 105/151 (69%), Gaps = 2/151 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L++IAL+ N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 262 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 321
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTAC 194
PEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 322 PELFPGLIYRMIKPRIVLLIFVSGKVVLTGA 352
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 134 RVVNVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTA 193
++ N++ T ++ + + + + + AEY P+ V RI P+ T IFS+G + T
Sbjct: 201 QLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 260
Query: 194 CNDSNK 199
+
Sbjct: 261 AKSEEQ 266
>sp|Q1JPY4|TBPL2_DANRE TATA box-binding protein-like protein 2 OS=Danio rerio GN=tbpl2
PE=1 SV=1
Length = 312
Score = 146 bits (369), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 107/157 (68%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 139 LQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 198
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 199 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLTHQQFSSYE 258
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T + ++I
Sbjct: 259 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEI 295
>sp|Q02879|TBP2_WHEAT TATA-box-binding protein 2 OS=Triticum aestivum GN=TBP2 PE=2 SV=1
Length = 201
Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 26 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 85
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE QSK+AAR+YAR +Q+LGF A+F +F++ N++ +C + F IR+ + H A + YE
Sbjct: 86 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRLEGLAYSHGAFSSYE 145
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 146 PELFPGLIYRMRQPKIVLLIFVSGKIVLTGAK 177
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 28 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 87
Query: 197 SNK 199
+
Sbjct: 88 EQQ 90
>sp|Q7SXL3|TBP_DANRE TATA-box-binding protein OS=Danio rerio GN=tbp PE=1 SV=1
Length = 302
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Query: 21 TQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGM 79
T + P+ P P + + + N+V + ++ C L+L+ IAL N EY +
Sbjct: 103 TTPLTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAA 162
Query: 80 VTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVL 139
V M++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++ N++
Sbjct: 163 VIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMV 222
Query: 140 GTCSMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACNDSN 198
G+C + F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 223 GSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRG 282
Query: 199 KI 200
+I
Sbjct: 283 EI 284
>sp|Q92146|TBP_TRIGA TATA-box-binding protein OS=Trimeresurus gramineus GN=TBP PE=3 SV=1
Length = 302
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 128 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 187
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 188 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 247
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T +I
Sbjct: 248 PELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEI 284
>sp|Q92117|TBP_PROFL TATA-box-binding protein OS=Protobothrops flavoviridis GN=TBP PE=3
SV=1
Length = 300
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 126 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 185
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 186 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 245
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T +I
Sbjct: 246 PELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEI 282
>sp|P26354|TBP_ACACA TATA-box-binding protein OS=Acanthamoeba castellanii GN=TFIID PE=2
SV=1
Length = 258
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 107/158 (67%), Gaps = 4/158 (2%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL+ N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 85 LQNIVSTVNLGCKLDLKNIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 144
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRI--LQFSEKHRAAEY 162
SE+ S++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ L F+ H + Y
Sbjct: 145 KSEEASRLAARKYARIIQKLGFAAKFLDFKIQNIVGSCDVRFPIRLEGLAFAHNHYCS-Y 203
Query: 163 EPELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
EPEL PG+ YR+ +PK L IF +G I +T +I
Sbjct: 204 EPELFPGLIYRMVQPKIVLLIFVSGKIVLTGAKVREEI 241
>sp|Q4R4F5|TBP_MACFA TATA-box-binding protein OS=Macaca fascicularis GN=TBP PE=2 SV=1
Length = 326
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
Query: 24 VVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTM 82
V P+ P P + + + N+V + ++ C L+L+ IAL N EY + V M
Sbjct: 130 VTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 189
Query: 83 KLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTC 142
++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C
Sbjct: 190 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 249
Query: 143 SMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
+ F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T +I
Sbjct: 250 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEI 308
>sp|P27633|TBP_XENLA TATA-box-binding protein OS=Xenopus laevis GN=tbp PE=1 SV=1
Length = 297
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 24 VVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTM 82
+ P+ +P P + + + N+V + ++ C L+L+ IAL N EY + V M
Sbjct: 101 ITPMTPISPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 160
Query: 83 KLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTC 142
++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C
Sbjct: 161 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 220
Query: 143 SMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTAC 194
+ F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 221 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGA 273
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI P+ T IFS+G + T
Sbjct: 125 NIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKS 184
Query: 197 SNK 199
+
Sbjct: 185 EEQ 187
>sp|P13393|TBP_YEAST TATA-box-binding protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPT15 PE=1 SV=3
Length = 240
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ +AL+ N EY + V M++R+P TTA I++SGK+ TGA
Sbjct: 67 LQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGA 126
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SED SK+A+R+YAR +Q++GF A+FT+F++ N++G+C + F IR+ + H + YE
Sbjct: 127 KSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYE 186
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +PK L IF +G I +T +I
Sbjct: 187 PELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEI 223
>sp|P29037|TBP_MOUSE TATA-box-binding protein OS=Mus musculus GN=Tbp PE=1 SV=1
Length = 316
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 5/185 (2%)
Query: 18 PPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RE 76
P P + PI P P + + + N+V + ++ C L+L+ IAL N EY +
Sbjct: 117 PSPMTPMTPI---TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR 173
Query: 77 NGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVV 136
V M++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++
Sbjct: 174 FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ 233
Query: 137 NVLGTCSMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
N++G+C + F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 234 NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 293
Query: 196 DSNKI 200
+I
Sbjct: 294 VRAEI 298
>sp|P53360|TBP_MESAU TATA-box-binding protein OS=Mesocricetus auratus GN=TBP PE=2 SV=1
Length = 318
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 5/185 (2%)
Query: 18 PPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RE 76
P P + PI P P + + + N+V + ++ C L+L+ IAL N EY +
Sbjct: 119 PSPMTPMTPI---TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR 175
Query: 77 NGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVV 136
V M++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++
Sbjct: 176 FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ 235
Query: 137 NVLGTCSMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
N++G+C + F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 236 NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 295
Query: 196 DSNKI 200
+I
Sbjct: 296 VRAEI 300
>sp|P20226|TBP_HUMAN TATA-box-binding protein OS=Homo sapiens GN=TBP PE=1 SV=2
Length = 339
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 5/185 (2%)
Query: 18 PPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RE 76
P P + PI P P + + + N+V + ++ C L+L+ IAL N EY +
Sbjct: 140 PSPMTPMTPI---TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR 196
Query: 77 NGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVV 136
V M++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++
Sbjct: 197 FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ 256
Query: 137 NVLGTCSMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
N++G+C + F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 257 NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 316
Query: 196 DSNKI 200
+I
Sbjct: 317 VRAEI 321
>sp|O13270|TBP_CHICK TATA-box-binding protein OS=Gallus gallus GN=TBP PE=2 SV=1
Length = 302
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 5/185 (2%)
Query: 18 PPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RE 76
P P + PI P P + + + N+V + ++ C L+L+ IAL N EY +
Sbjct: 103 PSPMTPMTPI---TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR 159
Query: 77 NGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVV 136
V M++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++
Sbjct: 160 FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ 219
Query: 137 NVLGTCSMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTACN 195
N++G+C + F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 220 NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 279
Query: 196 DSNKI 200
+I
Sbjct: 280 VRAEI 284
>sp|Q2HJ52|TBP_BOVIN TATA-box-binding protein OS=Bos taurus GN=TBP PE=2 SV=1
Length = 319
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 145 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 204
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ H+ + YE
Sbjct: 205 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 264
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T +I
Sbjct: 265 PELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEI 301
>sp|P28148|TBP2_ARATH TATA-box-binding protein 2 OS=Arabidopsis thaliana GN=TBP2 PE=1
SV=1
Length = 200
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I++SGK+ CTGA
Sbjct: 25 LQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 84
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE SK+AAR+YAR +Q+LGF A+F +F++ N++G+C + F IR+ + H A + YE
Sbjct: 85 KSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAFSSYE 144
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACN 195
PEL PG+ YR+ PK L IF +G I +T
Sbjct: 145 PELFPGLIYRMKLPKIVLLIFVSGKIVITGAK 176
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI PK T IF++G + T
Sbjct: 27 NIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 86
Query: 197 SN 198
+
Sbjct: 87 EH 88
>sp|Q28GG8|TBP_XENTR TATA-box-binding protein OS=Xenopus tropicalis GN=tbp PE=2 SV=1
Length = 297
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 112/179 (62%), Gaps = 5/179 (2%)
Query: 18 PPPTQTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RE 76
P P + PI P P + + + N+V + ++ C L+L+ IAL N EY +
Sbjct: 98 PSPMTPMTPI---TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR 154
Query: 77 NGMVTMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVV 136
V M++R+P TTA I+SSGK+ CTGA SE+QS++AAR+YAR +Q+LGF A+F +F++
Sbjct: 155 FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ 214
Query: 137 NVLGTCSMPFAIRILQFSEKHRA-AEYEPELHPGVTYRITRPKATLKIFSTGGITVTAC 194
N++G+C + F IR+ H+ + YEPEL PG+ YR+ +P+ L IF +G + +T
Sbjct: 215 NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGA 273
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 137 NVLGTCSMPFAIRILQFSEKHRAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACND 196
N++ T ++ + + + + R AEY P+ V RI P+ T IFS+G + T
Sbjct: 125 NIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKS 184
Query: 197 SNK 199
+
Sbjct: 185 EEQ 187
>sp|O43133|TBP_CANAL TATA-box-binding protein OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=TBP1 PE=2 SV=1
Length = 238
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL+ N EY + V M++R P TTA I++SGK+ TGA
Sbjct: 65 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGA 124
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SED SK+A+R+YAR +Q+LGF A+F +F++ N++G+ + FAIR+ + H + YE
Sbjct: 125 KSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTFSSYE 184
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +PK L IF +G I +T +I
Sbjct: 185 PELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEI 221
>sp|Q9NHP5|TBP_DROVI TATA-box-binding protein OS=Drosophila virilis GN=Tbp PE=3 SV=1
Length = 349
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
Query: 22 QTVVPIQNHAPPQPPAHDPEVDIIINNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMV 80
QT+ P P P + DP + + N+V + ++ C L+L++IAL+ N EY + V
Sbjct: 151 QTMGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAPV 210
Query: 81 TMKLRKPYTTASIWSSGKITCTGATSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLG 140
M++R+P TTA I+SSGK+ CTGA ED S++AAR+YAR +Q+LGF+A+F + ++ N++G
Sbjct: 211 IMRIREPRTTALIFSSGKMVCTGAKGEDDSRLAARKYARIIQKLGFRAKFLDLKIQNMVG 270
Query: 141 TCSMPFAIRILQFSEKH-RAAEYEPELHPGVTYRITRPKATLKIFSTGGITVTACNDSNK 199
C + F IR+ H + YEPEL PG+ YR+ RP+ L + + G + +T +
Sbjct: 271 LCDVKFPIRLEGLVLTHCNFSRYEPELFPGLIYRMVRPRIVLLLPAPGKVVLTGAKVRQE 330
Query: 200 I 200
I
Sbjct: 331 I 331
>sp|P17871|TBP_SCHPO TATA-box-binding protein OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tbp1 PE=3 SV=1
Length = 231
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL+ N EY + V M++R+P +TA I++SGK+ G
Sbjct: 58 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASGKMVVLGG 117
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SED SK+A+R+YAR +Q+LGF A+FT+F++ N++G+C + F IR+ + H + YE
Sbjct: 118 KSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYE 177
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTAC 194
PEL PG+ YR+ +PK L IF +G I +T
Sbjct: 178 PELFPGLIYRMVKPKVVLLIFVSGKIVLTGA 208
>sp|Q6SJ94|TBPL2_TAKRU TATA box-binding protein-like protein 2 OS=Takifugu rubripes
GN=tbpl2 PE=2 SV=1
Length = 322
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 46 INNVVCSFSVRCHLNLRQIALNGVNVEYR-RENGMVTMKLRKPYTTASIWSSGKITCTGA 104
+ N+V + ++ C L+L+ IAL N EY + V M++R+P TTA I+SSGK+ CTGA
Sbjct: 149 LQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 208
Query: 105 TSEDQSKIAARRYARCLQRLGFKARFTNFRVVNVLGTCSMPFAIRILQFSEKHRA-AEYE 163
SE+QS++AAR+YAR +Q+LGF ARF +F++ N++ +C + F IR+ H+ + YE
Sbjct: 209 KSEEQSRLAARKYARVVQKLGFPARFMDFKIQNMVASCDVCFPIRLEGLVLTHQQFSSYE 268
Query: 164 PELHPGVTYRITRPKATLKIFSTGGITVTACNDSNKI 200
PEL PG+ YR+ +P+ L IF +G + +T + +I
Sbjct: 269 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEI 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,540,866
Number of Sequences: 539616
Number of extensions: 2987893
Number of successful extensions: 11261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 10730
Number of HSP's gapped (non-prelim): 276
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)