BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy92
(638 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q10569|CPSF1_BOVIN Cleavage and polyadenylation specificity factor subunit 1 OS=Bos
taurus GN=CPSF1 PE=1 SV=1
Length = 1444
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/642 (48%), Positives = 415/642 (64%), Gaps = 62/642 (9%)
Query: 16 IVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHP----KGALKLRFKKL--------- 62
+V+E+L V+LG RP LLV ELLIY+AF H +G LK+RFKK+
Sbjct: 846 LVKEVLLVALGSRQRRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREK 905
Query: 63 -KVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRA 121
+ E+ PRG R+++ RYF +I GY GVF+CGP P WL +T RG LR
Sbjct: 906 KPKPSKKKAEGGSTEEGTGPRG-RVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRL 964
Query: 122 HPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPH 181
HPM IDGP+ + APFHN+NCPRGFLYFN + ELRISVLP +LSYDAPWPVRK+PL+CT H
Sbjct: 965 HPMGIDGPIDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAH 1024
Query: 182 FLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFS 241
++AYH+E+K Y + TST+ P T + GE+KE T RD R++ P F + L SP S
Sbjct: 1025 YVAYHVESKVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVS 1084
Query: 242 WEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFD 301
WE IP L EWEHV C+K VS+ E T+SGL+GY+A GT E+VTCRGRIL+ D
Sbjct: 1085 WEAIPNARIELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMD 1144
Query: 302 IIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGI 361
+IEVVPEPGQPLTKNK K++Y KEQKGPVTA+CH G LV+A+GQKI++W L+ ++LTG+
Sbjct: 1145 VIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGM 1204
Query: 362 AFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAG 421
AFIDT++YI M+SVKN IL D +SI+LLRYQ E +TLSLV+RD KP + S +
Sbjct: 1205 AFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVD 1264
Query: 422 NPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMY 481
N + +GF++SD+D+N++++MY
Sbjct: 1265 N----------------------------------------AQLGFLVSDRDRNLMVYMY 1284
Query: 482 QPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARS-----RFLTWYASL 536
PEA+ES GG RL+++ DFH+G HVNTF++ C+ ++ P +S + +TW+A+L
Sbjct: 1285 LPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCR--GAAEGPSKKSVVWENKHITWFATL 1342
Query: 537 DGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDG 596
DG +G LP+ EK YRRLLMLQN + T H GLNPRAFR N R ++DG
Sbjct: 1343 DGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRVLQNAVRNVLDG 1402
Query: 597 SLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF 638
L+ ++L LS ER E+ KKIG+ + ILD+L + + +++HF
Sbjct: 1403 ELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRVTAHF 1444
>sp|Q9EPU4|CPSF1_MOUSE Cleavage and polyadenylation specificity factor subunit 1 OS=Mus
musculus GN=Cpsf1 PE=1 SV=1
Length = 1441
Score = 630 bits (1625), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/656 (47%), Positives = 420/656 (64%), Gaps = 61/656 (9%)
Query: 2 GNFRSHSPSAMDET-IVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHP----KGALK 56
G R + E +V+E+L V+LG +RP LLV ELLIY+AF H +G LK
Sbjct: 828 GEVRKEEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLK 887
Query: 57 LRFKKL---------KVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPH 107
+RFKK+ K +++ + + G R+++ RYF +I GY GVF+CGP
Sbjct: 888 VRFKKVPHNINFREKKPKPSKKKAEGCSTEEGSGGRGRVARFRYFEDIYGYSGVFICGPS 947
Query: 108 PAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDA 167
P WL +T RG LR HPM IDGP+ + APFHNVNCPRGFLYFN + ELRISVLP +LSYDA
Sbjct: 948 PHWLLVTGRGALRLHPMGIDGPIDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDA 1007
Query: 168 PWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPP 227
PWPVRK+PL+CT H++AYH+E+K Y + TST P T + GE+KE RD R+I P
Sbjct: 1008 PWPVRKIPLRCTAHYVAYHVESKVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHP 1067
Query: 228 LVSQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNY 287
F + L SP SWE IP L EWEHV C+K VS+ E T+SGL+GY+A GT
Sbjct: 1068 QQEAFSIQLISPVSWEAIPNARIELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQ 1127
Query: 288 SEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQK 347
E+VTCRGRIL+ D+IEVVPEPGQPLTKNK K++Y KEQKGPVTA+CH G LV+A+GQK
Sbjct: 1128 GEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQK 1187
Query: 348 IYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARD 407
I++W L+ ++LTG+AFIDT++YI M+SVKN IL D +SI+LLRYQ E +TLSLV+RD
Sbjct: 1188 IFLWSLRASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRD 1247
Query: 408 YKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGF 467
KP + S + N + +GF
Sbjct: 1248 AKPLEVYSVDFMVDN----------------------------------------AQLGF 1267
Query: 468 MISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARS 527
++SD+D+N++++MY PEA+ES GG RL+++ DFH+G HVNTF++ C+ + ++ P +S
Sbjct: 1268 LVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGA--AEGPSKKS 1325
Query: 528 -----RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGK 582
+ +TW+A+LDG +G LP+ EK YRRLLMLQN + T H GLNPRAFR
Sbjct: 1326 VVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVD 1385
Query: 583 GYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF 638
N R ++DG L+ ++L LS ER E+ KKIG+ + ILD+L + + +++HF
Sbjct: 1386 RRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTAHF 1441
>sp|Q10570|CPSF1_HUMAN Cleavage and polyadenylation specificity factor subunit 1 OS=Homo
sapiens GN=CPSF1 PE=1 SV=2
Length = 1443
Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust.
Identities = 309/639 (48%), Positives = 414/639 (64%), Gaps = 56/639 (8%)
Query: 16 IVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHP----KGALKLRFKKL--------- 62
+V+E+L V+LG +RP LLV ELLIY+AF H +G LK+RFKK+
Sbjct: 845 LVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREK 904
Query: 63 KVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAH 122
K +++ + G R+++ RYF +I GY GVF+CGP P WL +T RG LR H
Sbjct: 905 KPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLH 964
Query: 123 PMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHF 182
PM IDGPV + APFHNVNCPRGFLYFN + ELRISVLP +LSYDAPWPVRK+PL+CT H+
Sbjct: 965 PMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHY 1024
Query: 183 LAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSW 242
+AYH+E+K Y + TST P + GE+KE T RD R+I P F + L SP SW
Sbjct: 1025 VAYHVESKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSW 1084
Query: 243 EEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDI 302
E IP L EWEHV C+K VS+ E T+SGL+GY+A GT E+VTCRGRIL+ D+
Sbjct: 1085 EAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMDV 1144
Query: 303 IEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIA 362
IEVVPEPGQPLTKNK K++Y KEQKGPVTA+CH G LV+A+GQKI++W L+ ++LTG+A
Sbjct: 1145 IEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGMA 1204
Query: 363 FIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGN 422
FIDT++YI M+SVKN IL D +SI+LLRYQ E +TLSLV+RD KP + S + N
Sbjct: 1205 FIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDN 1264
Query: 423 PSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQ 482
+ +GF++SD+D+N++++MY
Sbjct: 1265 ----------------------------------------AQLGFLVSDRDRNLMVYMYL 1284
Query: 483 PEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGA---RSRFLTWYASLDGA 539
PEA+ES GG RL+++ DFH+G HVNTF++ C+ ++ + + ++ +TW+A+LDG
Sbjct: 1285 PEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSKKSVVWENKHITWFATLDGG 1344
Query: 540 LGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLV 599
+G LP+ EK YRRLLMLQN + T H GLNPRAFR N R ++DG L+
Sbjct: 1345 IGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELL 1404
Query: 600 WKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF 638
++L LS ER E+ KKIG+ + ILD+L + + +++HF
Sbjct: 1405 NRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTAHF 1443
>sp|Q9V726|CPSF1_DROME Cleavage and polyadenylation specificity factor subunit 1
OS=Drosophila melanogaster GN=Cpsf160 PE=1 SV=1
Length = 1455
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 308/651 (47%), Positives = 422/651 (64%), Gaps = 56/651 (8%)
Query: 2 GNFRSHSPSAMDETIVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHPKGALKLRFKK 61
G ++ P + + EL + LGL+G RPLLLVRT+ ELLIYQ FR+PKG LK+RF+K
Sbjct: 847 GIVQACMPQHANSPLPLELSVIGLGLNGERPLLLVRTRVELLIYQVFRYPKGHLKIRFRK 906
Query: 62 LKVLFVSDRS------KRANEQPGL------PRGVRISQMRYFSNIAGYQGVFLCGPHPA 109
+ L + D+ +EQ + P+ V+ ++R F+N+ G GV +CG +P
Sbjct: 907 MDQLNLLDQQPTHIDLDENDEQEEIESYQMQPKYVQ--KLRPFANVGGLSGVMVCGVNPC 964
Query: 110 WLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPW 169
++FLT RGELR H + +G V + A F+NVN P GFLYF+ EL+ISVLP++LSYD+ W
Sbjct: 965 FVFLTFRGELRIHRLLGNGDVRSFAAFNNVNIPNGFLYFDTTYELKISVLPSYLSYDSVW 1024
Query: 170 PVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLV 229
PVRKVPL+CTP L YH E + YC++T T EP T YY+FNGEDKEL + R RFI P+
Sbjct: 1025 PVRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIG 1084
Query: 230 SQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSE 289
SQF + L SP +WE +P + WEHV K V + YEGT SGL+ Y+ +GTN+NYSE
Sbjct: 1085 SQFEMVLISPETWEIVPDASITFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNYSE 1144
Query: 290 DVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIY 349
D+T RG I ++DIIEVVPEPG+P+TK KIK I+ KEQKGPV+AI V GFLVT +GQKIY
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKIY 1204
Query: 350 IWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYK 409
IWQL+D DL G+AFIDT +Y+ +++VK+LI + D +SI+LLR+Q EYRTLSL +RD+
Sbjct: 1205 IWQLRDGDLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLASRDFN 1264
Query: 410 PTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMI 469
P + + N S++GF++
Sbjct: 1265 PLEVYGIEFMVDN----------------------------------------SNLGFLV 1284
Query: 470 SDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPG--ARS 527
+D ++N++++MYQPEARES GG +L++K D+HLGQ VNT F+++C + +
Sbjct: 1285 TDAERNIIVYMYQPEARESLGGQKLLRKADYHLGQVVNTMFRVQCHQKGLHQRQPFLYEN 1344
Query: 528 RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAG 587
+ Y +LDGALG+ LPLPEK YRR LMLQNV++++ H GLNP+ +RT K
Sbjct: 1345 KHFVVYGTLDGALGYCLPLPEKVYRRFLMLQNVLLSYQEHLCGLNPKEYRTLKSSKKQGI 1404
Query: 588 NPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF 638
NPSR IIDG L+W + ++ ER E+ KKIG++ +IL +L +IE L+S F
Sbjct: 1405 NPSRCIIDGDLIWSYRLMANSERNEVAKKIGTRTEEILGDLLEIERLASVF 1455
>sp|A8XPU7|CPSF1_CAEBR Probable cleavage and polyadenylation specificity factor subunit 1
OS=Caenorhabditis briggsae GN=cpsf-1 PE=3 SV=1
Length = 1454
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 344/640 (53%), Gaps = 56/640 (8%)
Query: 17 VQELLTVSLGLHGNRPLLLVRTQHELLIYQAFR--HPK-GALKLRFKKLKVL-------F 66
V E V +G++ P+L+ E+++Y+ F +P+ G L + F+KL L +
Sbjct: 853 VVEAQIVGMGINQAHPVLIAIIDEEVVLYEMFASYNPQPGHLGVAFRKLPHLIGLRTSPY 912
Query: 67 VSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQ-GVFLCGPHPAWLFLTSRGELRAHPMT 125
V+ KRA + + G R + + F I+ GV + G P L + G ++ H MT
Sbjct: 913 VNIDGKRAPFEMEMEHGKRYTLIHPFERISSINNGVMIGGAVPTLLVYGAWGGMQTHQMT 972
Query: 126 IDGPVSTLAPFHNVNCPRGFLYF-NAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLA 184
IDG + PF+N N GF+Y KSELRI+ + YD P+PV+K+ + T H +
Sbjct: 973 IDGSIKAFTPFNNENVLHGFVYMTQQKSELRIARMHPDFDYDMPYPVKKIEVGKTVHNVR 1032
Query: 185 YHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEE 244
Y + + Y +V+S +PS + +DK+ +D F+ P ++ ++LFS W
Sbjct: 1033 YLMNSDIYAVVSSVPKPSNKIWVVMNDDKQEEIHEKDENFVLPAPPKYTLNLFSSQDWAA 1092
Query: 245 IPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIE 304
+P T F + E V +++V ++ E GL Y+AL T NY E+V RGRI+L ++IE
Sbjct: 1093 VPNTEFEFEDMEAVTAMEDVPLKSESRYGGLDTYLALATVNNYGEEVLVRGRIILCEVIE 1152
Query: 305 VVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFI 364
VVPEPGQP + KIK++Y KEQKGPVT +C + G L++ +GQK++IWQ KDNDL GI+F+
Sbjct: 1153 VVPEPGQPTSNRKIKVLYDKEQKGPVTGLCAINGLLLSGMGQKVFIWQFKDNDLMGISFL 1212
Query: 365 DTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPS 424
D Y+ + S++ + L D S++L+R+Q E + +S+ +RD + K A S
Sbjct: 1213 DMHYYVYQLHSIRTIALALDARESMSLIRFQEENKAMSIASRD------DRKCAQAPMAS 1266
Query: 425 RGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPE 484
++DG +GF++SD+ N+ LF Y PE
Sbjct: 1267 EFLVDG--------------------------------MHIGFLLSDEHGNITLFSYSPE 1294
Query: 485 ARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSI-SDAPGARS----RFLTWYASLDGA 539
A ESNGG RL K ++G ++N F +++ S + S +P R R T + SLDG+
Sbjct: 1295 APESNGGERLTVKAAINIGTNINAFLRVKGHTSLLDSSSPEERENIEQRMNTIFGSLDGS 1354
Query: 540 LGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYK-GKGYYAGNPSRGIIDGSL 598
G+ PL EK+YRRL LQ + + T GL+ + R+ K + G +R +IDG +
Sbjct: 1355 FGYIRPLTEKSYRRLHFLQTFIGSVTPQIAGLHIKGARSSKPSQPIVNGRNARNLIDGDV 1414
Query: 599 VWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF 638
V ++L LS+ ++ ++ +++G ILD+L + ++ ++
Sbjct: 1415 VEQYLHLSVYDKTDLARRLGVGRYHILDDLMQLRRMAYYY 1454
>sp|Q9N4C2|CPSF1_CAEEL Probable cleavage and polyadenylation specificity factor subunit 1
OS=Caenorhabditis elegans GN=cpsf-1 PE=3 SV=2
Length = 1454
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 339/641 (52%), Gaps = 58/641 (9%)
Query: 17 VQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHPK---GALKLRFKKLKVLF------- 66
V E V +G++ P+L+ ++++Y+ F G L + F+KL
Sbjct: 853 VLEAQIVGMGINQAHPILMAIVDEQVVLYEMFSSSNPIPGHLGISFRKLPHFICLRTSSH 912
Query: 67 VSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQ-GVFLCGPHPAWLFLTSRGELRAHPMT 125
++ KRA + + G R S + F ++ GV + G P L + G ++ H MT
Sbjct: 913 LNSDGKRAPFEMKINNGKRFSLIHPFERVSSVNNGVMIVGAVPTLLVYGAWGGMQTHQMT 972
Query: 126 IDGPVSTLAPFHNVNCPRGFLYFNA-KSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLA 184
+DGP+ PF+N N G +Y KSELRI+ + Y+ P+PV+K+ + T H +
Sbjct: 973 VDGPIKAFTPFNNENVLHGIVYMTQHKSELRIARMHPDFDYEMPYPVKKIEVGRTIHHVR 1032
Query: 185 YHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEE 244
Y + + Y +V+S +PS + +DK+ +D F+ P ++ ++LFS W
Sbjct: 1033 YLMNSDVYAVVSSIPKPSNKIWVVMNDDKQEEIHEKDENFVLPAPPKYTLNLFSSQDWAA 1092
Query: 245 IPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIE 304
+P T + E V ++V+++ E T+SGL +A+GT NY E+V RGRI+L ++IE
Sbjct: 1093 VPNTEISFEDMEAVTACEDVALKSESTISGLETLLAMGTVNNYGEEVLVRGRIILCEVIE 1152
Query: 305 VVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFI 364
VVPEP QP + KIK+++ KEQKGPVT +C + G L+ +GQK++IWQ KDNDL GI+F+
Sbjct: 1153 VVPEPDQPTSNRKIKVLFDKEQKGPVTGLCAINGLLLCGMGQKVFIWQFKDNDLMGISFL 1212
Query: 365 DTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVAR-DYKPTQPNSKGYYAGNP 423
D Y+ + S++ + + D S++L+R+Q + + +S+ +R D K QP
Sbjct: 1213 DMHYYVYQLHSLRTIAIACDARESMSLIRFQEDNKAMSIASRDDRKCAQPPMA------- 1265
Query: 424 SRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQP 483
S+ ++DG+ V GF++SD+ N+ +F Y P
Sbjct: 1266 SQLVVDGAHV--------------------------------GFLLSDETGNITMFNYAP 1293
Query: 484 EARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSI-----SDAPGARSRFLTWYASLDG 538
EA ESNGG RL + ++G ++N F ++R S + + R T +ASLDG
Sbjct: 1294 EAPESNGGERLTVRAAINIGTNINAFVRLRGHTSLLQLNNEDEKEAIEQRMTTVFASLDG 1353
Query: 539 ALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYK-GKGYYAGNPSRGIIDGS 597
+ GF PL EK+YRRL LQ + + T GL+ + R+ K + G +R +IDG
Sbjct: 1354 SFGFVRPLTEKSYRRLHFLQTFIGSVTPQIAGLHIKGSRSAKPSQPIVNGRNARNLIDGD 1413
Query: 598 LVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF 638
+V ++L LSL ++ ++ +++G I+D+L + ++ ++
Sbjct: 1414 VVEQYLHLSLYDKTDLARRLGVGRYHIIDDLMQLRRMAFYY 1454
>sp|Q7XWP1|CPSF1_ORYSJ Probable cleavage and polyadenylation specificity factor subunit 1
OS=Oryza sativa subsp. japonica GN=Os04g0252200 PE=3 SV=2
Length = 1441
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 301/637 (47%), Gaps = 94/637 (14%)
Query: 30 NRPLLL-VRTQHELLIYQAFRH-------------PKG------ALKLRFKKLKVLFVSD 69
+RP L + LL Y AF + P+G A R + L+ VS
Sbjct: 857 SRPFLFGLLNDGTLLCYHAFSYEASESNVKRVPLSPQGSADHHNASDSRLRNLRFHRVSI 916
Query: 70 RSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGP 129
+ P L R ++ F+N+ GY+G+FL G PAW+ + R LR HP DGP
Sbjct: 917 DITSREDIPTLGR----PRITTFNNVGGYEGLFLSGTRPAWV-MVCRQRLRVHPQLCDGP 971
Query: 130 VSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLET 189
+ HNVNC GF+Y ++ L+I LP+ +YD+ WPV+KVPL TPH + Y+ E
Sbjct: 972 IEAFTVLHNVNCSHGFIYVTSQGFLKICQLPSAYNYDSYWPVQKVPLHGTPHQVTYYAEQ 1031
Query: 190 KTYCIVTSTA---------EPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFS-- 238
Y ++ S D + D ++ + D+ V +F V +
Sbjct: 1032 SLYPLIVSVPVVRPLNQVLSSMADQESVHHMDNDVTS--TDALHKTYTVDEFEVRILELE 1089
Query: 239 --PFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGR 296
WE ++ P+ +E+ L ++ V++ + T +A+GT Y EDV RGR
Sbjct: 1090 KPGGHWE--TKSTIPMQLFENALTVRIVTL-HNTTTKENETLLAIGTAYVLGEDVAARGR 1146
Query: 297 ILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDN 356
+LLF + ++N + +Y+KE KG V+A+ + G L+ A G KI + +
Sbjct: 1147 VLLFSFTK------SENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGA 1200
Query: 357 DLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSK 416
+LT +AF D +++ S+ VKN +L GD +SI L ++ + LSL+A+D+
Sbjct: 1201 ELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDF-------- 1252
Query: 417 GYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNV 476
G + +IDG S++ + SD DKNV
Sbjct: 1253 GSLDCFATEFLIDG--------------------------------STLSLVASDSDKNV 1280
Query: 477 VLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASL 536
+F Y P+ ES G +L+ + +FH+G H+ F +++ P+ + +RF + +L
Sbjct: 1281 QIFYYAPKMVESWKGQKLLSRAEFHVGAHITKFLRLQMLPTQ-GLSSEKTNRFALLFGNL 1339
Query: 537 DGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTY--KGKGYYAGNPSRGII 594
DG +G P+ E +RRL LQ +V H GLNPR+FR + GKG+ G II
Sbjct: 1340 DGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQFHSNGKGHRPG--PDNII 1397
Query: 595 DGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDI 631
D L+ + LSL E+L++ ++IG+ + IL DI
Sbjct: 1398 DFELLCSYEMLSLDEQLDVAQQIGTTRSQILSNFSDI 1434
>sp|Q9FGR0|CPSF1_ARATH Cleavage and polyadenylation specificity factor subunit 1
OS=Arabidopsis thaliana GN=CPSF160 PE=1 SV=2
Length = 1442
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 287/603 (47%), Gaps = 72/603 (11%)
Query: 47 AFRHPKGALKLRFKKLKVLFVS-DRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCG 105
A + G+ KLR LK L + D S R G GV ++ F NI+G+QG FL G
Sbjct: 897 AALNSSGSSKLR--NLKFLRIPLDTSTR----EGTSDGVASQRITMFKNISGHQGFFLSG 950
Query: 106 PHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSY 165
P W L R LR H DG ++ HNVNC GF+Y A+ L+I LP+ Y
Sbjct: 951 SRPGWCMLF-RERLRFHSQLCDGSIAAFTVLHNVNCNHGFIYVTAQGVLKICQLPSASIY 1009
Query: 166 DAPWPVRKVPLKCTPHFLAYHLETKTYCIVTS--TAEP-----STDYYKFNGEDKELVTD 218
D WPV+K+PLK TPH + Y+ E Y ++ S ++P S+ + G+ +
Sbjct: 1010 DNYWPVQKIPLKATPHQVTYYAEKNLYPLIVSYPVSKPLNQVLSSLVDQEAGQQLDNHNM 1069
Query: 219 PRDSRFIPPLVSQFHVSLFSPFS----WEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSG 274
D V +F + + P WE + P+ EH L ++ V++ T
Sbjct: 1070 SSDDLQRTYTVEEFEIQILEPERSGGPWE--TKAKIPMQTSEHALTVRVVTLLNASTGEN 1127
Query: 275 LRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAIC 334
+A+GT Y EDV RGR+LLF ++N + +Y++E KG ++A+
Sbjct: 1128 -ETLLAVGTAYVQGEDVAARGRVLLFSF-----GKNGDNSQNVVTEVYSRELKGAISAVA 1181
Query: 335 HVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDT-EVYIASMVSVKNLILVGDYARSIALLR 393
+ G L+ + G KI + + +L G+AF D +Y+ SM VK+ IL+GD +SI L
Sbjct: 1182 SIQGHLLISSGPKIILHKWNGTELNGVAFFDAPPLYVVSMNVVKSFILLGDVHKSIYFLS 1241
Query: 394 YQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGS 453
++ + LSL+A+D++ + + +IDG
Sbjct: 1242 WKEQGSQLSLLAKDFESLDCFATEF--------LIDG----------------------- 1270
Query: 454 KHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIR 513
S++ +SD+ KN+ +F Y P+ ES G +L+ + +FH+G HV+ F +++
Sbjct: 1271 ---------STLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKFLRLQ 1321
Query: 514 CKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNP 573
+S +RF + +LDG+ G PL E +RRL LQ +V H GLNP
Sbjct: 1322 M----VSSGADKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNP 1377
Query: 574 RAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEA 633
AFR ++ G + I+D L+ + L L E+LE+ +IG+ IL +L D+
Sbjct: 1378 LAFRQFRSSGKARRSGPDSIVDCELLCHYEMLPLEEQLELAHQIGTTRYSILKDLVDLSV 1437
Query: 634 LSS 636
+S
Sbjct: 1438 GTS 1440
>sp|O74733|CFT1_SCHPO Protein cft1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cft1 PE=3 SV=1
Length = 1441
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 303/641 (47%), Gaps = 78/641 (12%)
Query: 19 ELLTVSLGLHGNRPLLLVRTQ-HELLIYQAFRHP---KGALKLRFKKLKVLFVSDRSKRA 74
ELL LG P L +R++ +E+ +Y+AF + K L F K+ ++ R +A
Sbjct: 853 ELLVADLGDDFKEPHLFLRSRLNEITVYKAFLYSNTDKHKNLLAFAKVPQETMT-REFQA 911
Query: 75 NEQPGLPRGVRIS------------QMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAH 122
N G PR + +M + + VF+ G P + T +
Sbjct: 912 N--VGTPRDAESTMEKKASSSVDHLKMTALEVVGNHSAVFVTGRKPFLILSTLHSNAKFF 969
Query: 123 PMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHF 182
P++ + P+ ++APFH + P+G++Y + S +RI YD WP +KV L +
Sbjct: 970 PISSNIPILSVAPFHAHHAPQGYIYVDENSFIRICKFQEDFEYDNKWPYKKVSLGKQING 1029
Query: 183 LAYHLETKTYCIVTSTAEPSTDYYKFNGEDKE---LVTDPRDSRFIPPLVSQFHVSLFSP 239
+AYH Y + +A P +K ED +TD D P+ + + L SP
Sbjct: 1030 IAYHPTKMVYAV--GSAVPIE--FKVTDEDGNEPYAITDDNDYL---PMANTGSLDLVSP 1082
Query: 240 FSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILL 299
+W I F ++E L + V++E T + YIA+GT+ ED+ RG L
Sbjct: 1083 LTWTVIDSYEF--QQFEIPLSVALVNLEVSETTKLRKPYIAVGTSITKGEDIAVRGSTYL 1140
Query: 300 FDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDND-L 358
F+II+VVP+PG+P T++K+K++ +E KG V +C V G+L++ GQK+ + L+D D L
Sbjct: 1141 FEIIDVVPQPGRPETRHKLKLVTREEIKGTVAVVCEVDGYLLSGQGQKVIVRALEDEDHL 1200
Query: 359 TGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGY 418
G++FID Y S ++NL+L GD +++ + + E ++L SKG
Sbjct: 1201 VGVSFIDLGSYTLSAKCLRNLLLFGDVRQNVTFVGFAEEPYRMTLF----------SKGQ 1250
Query: 419 YAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVL 478
A N S D L + ++ F+++D N+ L
Sbjct: 1251 EALNVSAA------------------------------DFLVQGENLYFVVADTSGNLRL 1280
Query: 479 FMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAP---GARSRFLTWYAS 535
Y PE ES+ G RL+ + DFH+G +V T I K +A F +
Sbjct: 1281 LAYDPENPESHSGERLVTRGDFHIG-NVITAMTILPKEKKHQNAEYGYDTGDDFSCVMVN 1339
Query: 536 LDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIID 595
DG L +P+ ++ YRRL ++QN + + GGLNP+++R NP+R I+D
Sbjct: 1340 SDGGLQMLVPISDRVYRRLNIIQNYLANRVNTIGGLNPKSYRLITSPSNLT-NPTRRILD 1398
Query: 596 GSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDI-EALS 635
G L+ F +S+ R E+ K G + I+++L ++ EALS
Sbjct: 1399 GMLIDYFTYMSVAHRHEMAHKCGVPVSTIMNDLVELDEALS 1439
>sp|Q1E5B0|CFT1_COCIM Protein CFT1 OS=Coccidioides immitis (strain RS) GN=CFT1 PE=3 SV=1
Length = 1387
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 184/646 (28%), Positives = 311/646 (48%), Gaps = 95/646 (14%)
Query: 17 VQELLTVSLGLHGNR-PLLLVRTQHE-LLIYQAFRHPKGAL---KLRFKKLKVLFVS--D 69
+ E+L LG +R P +++RT ++ L++YQ + HPK +L +LRF K+ F+ D
Sbjct: 804 LSEVLIADLGDSISRQPYMILRTANDDLILYQPY-HPKTSLDKPELRFVKIIDHFLPRFD 862
Query: 70 RSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDG- 128
S +A +P +R +S+I GY+ VF+ G +P ++ +S H + + G
Sbjct: 863 PSPKAY----MPHS---KFLRAYSDICGYKTVFMSGSNPCFVMKSSTSS--PHVLRLRGE 913
Query: 129 PVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLE 188
VS+L+ FH C +GF Y +A + +R+ LP++ +D W RKV + + Y
Sbjct: 914 AVSSLSSFHIPACEKGFAYVDASNMVRMCRLPSNTRFDNSWVTRKVHVGDQIDCVEYFAH 973
Query: 189 TKTYCIVTSTAEPSTDYYKFN---GEDKELVTDPRDS--RFIPPLVSQFHVSLFSPFSWE 243
++ Y + +S +K + ED E+ + R F+P L + + L SP +W
Sbjct: 974 SEIYALGSS--------HKVDFKLPEDDEIHPEWRSEVISFMPQL-ERGCIKLLSPRTWS 1024
Query: 244 EIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDII 303
+ ++ L + E V+C+K ++ME ++ + +GT ED+T RG I +F+II
Sbjct: 1025 VV--DSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITPRGSIYVFEII 1082
Query: 304 EVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK-DNDLTG 360
EV P+P +P T K+K+ + KG VTA+ + GFL+ A GQK + LK D L
Sbjct: 1083 EVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRGLKEDGSLLP 1142
Query: 361 IAFIDTEVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGY 418
+AF+D + Y+ + ++ L ++GD + I Y E L+L +D + Q + +
Sbjct: 1143 VAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKDNEYLQVIAADF 1202
Query: 419 YAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVL 478
L G+RL I +++D D + +
Sbjct: 1203 --------------------LPDGKRLYI--------------------LVADDDCTIHV 1222
Query: 479 FMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSIS---------DAPGARSRF 529
Y PE S+ G RL+ ++ FH G +T + SS S D +
Sbjct: 1223 LEYDPEDPTSSKGDRLLHRSSFHTGHFTSTMTLLPEHSSSPSADDPEEDDMDVDYVPKSY 1282
Query: 530 LTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNP 589
S +G++G PL E +YRRL LQ+ +VT H GLNP+A+R + G+
Sbjct: 1283 QVLVTSQEGSIGVVTPLTEDSYRRLSALQSQLVTSMEHPCGLNPKAYRAVESDGFGG--- 1339
Query: 590 SRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALS 635
RGI+DG+L+ ++L + + + EI ++G+ DI D+E +S
Sbjct: 1340 -RGIVDGNLLLRWLDMGVQRKAEIAGRVGA---DIESIRVDLETIS 1381
>sp|A1DB13|CFT1_NEOFI Protein cft1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=cft1 PE=3 SV=1
Length = 1400
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 180/649 (27%), Positives = 304/649 (46%), Gaps = 92/649 (14%)
Query: 16 IVQELLTVSLGLHGN-RPLLLVRTQ-HELLIYQAFRHP-KGA--LKLRFKK-----LKVL 65
++ E + LG N P L++RT+ +L+IY+AF KG L F K L +
Sbjct: 807 VLSEAVIADLGESWNPSPHLILRTESDDLVIYKAFASSIKGESHTHLSFVKETNHTLPRV 866
Query: 66 FVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMT 125
SD+ ++NE+ R +RI NI+ VF+ GP +++ T++ H
Sbjct: 867 TTSDKEMQSNEELSRSRSLRI-----LPNISDLSAVFMPGPSASFILKTAKS--CPHVFR 919
Query: 126 IDGPVSTLAPFHNVNCP---RGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHF 182
+ G ++ P +GF+Y ++K LRI P+ +D W +RK+ +
Sbjct: 920 LRGEFVRGLSIFDLASPSLDKGFIYVDSKDVLRICRFPSETLFDYTWALRKIGIGEQVDH 979
Query: 183 LAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDS--RFIPPLVSQFHVSLFSPF 240
LAY ++TY + TS S D+ +D EL D R+ F+P L Q + + SP
Sbjct: 980 LAYATSSETYVLGTSH---SADFKL--PDDDELHPDWRNEVISFLPEL-RQCSLKVVSPR 1033
Query: 241 SWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLF 300
+W I ++ L E+V+ +KN+ +E R I +GT + + ED+ RG I +F
Sbjct: 1034 TWTVI--DSYSLGPAEYVMAVKNMDLEVSENTHERRNMIVVGTAFAWGEDIPSRGCIYVF 1091
Query: 301 DIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK-DND 357
++I+VVP+P +P T K+K+I + KG VTA+ + GFL+ A GQK + LK D
Sbjct: 1092 EVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRGLKEDGS 1151
Query: 358 LTGIAFIDTEVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNS 415
L +AF+D + Y+ + +K + ++GD + + Y E +SL +D
Sbjct: 1152 LLPVAFMDMQCYVNVVKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD-------- 1203
Query: 416 KGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKN 475
+GY + + DG ++ +++D D N
Sbjct: 1204 QGYLEVVAAEFLPDGDKLF--------------------------------ILVADSDCN 1231
Query: 476 VVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFF----------KIRCKPSSIS-DAPG 524
+ + Y PE +S+ G RL+ ++ FH+G T K P S+ D+
Sbjct: 1232 LHVLQYDPEDPKSSNGDRLLARSKFHMGHFATTMTLLPRTMVSSEKAMADPDSMEIDSQT 1291
Query: 525 ARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGY 584
+ L S G++G +PE++YRRL LQ+ + H GLNPRA+R +
Sbjct: 1292 ISQQVLI--TSQSGSVGIVTSVPEESYRRLSALQSQLTNSLEHPCGLNPRAYRAVESD-- 1347
Query: 585 YAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEA 633
G RG++DG+L++++L + ++EI ++G+ +I +L I A
Sbjct: 1348 --GTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAHEWEIKADLEAIGA 1394
>sp|Q4WCL1|CFT1_ASPFU Protein cft1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=cft1 PE=3 SV=2
Length = 1401
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 181/651 (27%), Positives = 309/651 (47%), Gaps = 94/651 (14%)
Query: 16 IVQELLTVSLGLHGN-RPLLLVRTQ-HELLIYQAF-RHPKGA--LKLRFKK-----LKVL 65
++ E + LG N P L++RT+ +L+IY+AF + KG +L F K L +
Sbjct: 806 VLSEAVIADLGESWNPSPHLILRTESDDLVIYKAFASYIKGESHTRLSFVKESNHTLPRV 865
Query: 66 FVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMT 125
S++ ++NE+ PR +RI NI+ + VF+ G +++ T++ H
Sbjct: 866 TTSEKEMQSNEKLSRPRSLRI-----LPNISNFSAVFMPGRPASFILKTAKS--CPHVFR 918
Query: 126 IDGP-VSTLAPFH--NVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHF 182
+ G V +L+ F + + GF+Y ++K LRI P+ +D W +RK+ +
Sbjct: 919 LRGEFVRSLSIFDLASPSLDTGFIYVDSKDVLRICRFPSETLFDYTWALRKISIGEQVDH 978
Query: 183 LAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDS----RFIPPLVSQFHVSLFS 238
LAY ++TY + TS S D+ +D EL D R+ F+P L Q + + S
Sbjct: 979 LAYATSSETYVLGTSH---SADFKL--PDDDELHPDWRNEGLVISFLPEL-RQCSLKVVS 1032
Query: 239 PFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRIL 298
P +W I ++ L E+V+ +KN+ +E R I +GT + ED+ RG I
Sbjct: 1033 PRTWTVI--DSYSLGPDEYVMAVKNMDLEVSENTHERRNMIVVGTAFARGEDIPSRGCIY 1090
Query: 299 LFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK-D 355
+F++I+VVP+P +P T K+K+I + KG VTA+ + GFL+ A GQK + LK D
Sbjct: 1091 VFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRGLKED 1150
Query: 356 NDLTGIAFIDTEVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQP 413
L +AF+D + Y+ + +K + ++GD + + Y E +SL +D
Sbjct: 1151 GSLLPVAFMDMQCYVNVLKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD------ 1204
Query: 414 NSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKD 473
+GY + + DG ++ +++D D
Sbjct: 1205 --QGYLEVVAAEFLPDGDKLF--------------------------------ILVADSD 1230
Query: 474 KNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFF----------KIRCKPSSIS-DA 522
N+ + Y PE +S+ G RL+ ++ FH+G T K P S+ D+
Sbjct: 1231 CNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFATTMTLLPRTMVSSEKAMANPDSMEIDS 1290
Query: 523 PGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGK 582
+ L S G++G +PE++YRRL LQ+ + H GLNPRA+R +
Sbjct: 1291 QTISQQVLI--TSQSGSVGIVTSVPEESYRRLSALQSQLANSLEHPCGLNPRAYRAVESD 1348
Query: 583 GYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEA 633
G RG++DG+L++++L + ++EI ++G+ +I +L I A
Sbjct: 1349 ----GTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAHEWEIKADLEAIGA 1395
>sp|A1C3U1|CFT1_ASPCL Protein cft1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=cft1 PE=3 SV=1
Length = 1401
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 182/650 (28%), Positives = 306/650 (47%), Gaps = 103/650 (15%)
Query: 16 IVQELLTVSLGLHGN-RPLLLVRTQHE-LLIYQAF----RHPKGALKLRFKK-----LKV 64
I+ E + +LG N P L++RT ++ L+IY+ F LRF K L
Sbjct: 807 ILSEAIVANLGDSWNPLPHLILRTDNDDLVIYKPFISSVEEDGDPHCLRFVKETNHVLPR 866
Query: 65 LFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRG-----EL 119
+ + ++++P R + I +I+GY VF+ G +++F TSR L
Sbjct: 867 IPPDSDTNISDKEPSNHRPLCI-----LPDISGYSAVFMPGTSASFIFKTSRSCPHILRL 921
Query: 120 RAHPMTIDGPVSTLAPFH--NVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLK 177
R G V +L+ F + + RGF+Y ++K +RI LP YD W ++KV +
Sbjct: 922 RG------GVVRSLSDFDFTDPSLGRGFIYVDSKDVVRICQLPPETIYDYSWTLKKVAIG 975
Query: 178 CTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDS--RFIPPLVSQFHVS 235
LAY + ++TY + TS S D+ ED EL + R+ F+P L Q +
Sbjct: 976 EHVDHLAYSISSETYVLGTSH---SADFKL--PEDDELHPEWRNEAISFLPEL-RQCCLK 1029
Query: 236 LFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRG 295
+ P +W I ++ L E ++ +KN+++E + I +GT ED+ RG
Sbjct: 1030 VVHPKTWTVI--DSYTLGPDEEIMAVKNMNLEVSENTHERKNMIVVGTALARGEDIPARG 1087
Query: 296 RILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQL 353
I +F++I+VVP+P +P T K+K+I + KG VTA+ + GFL+ A GQK + L
Sbjct: 1088 CIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSEIGGQGFLIAAQGQKCMVRGL 1147
Query: 354 K-DNDLTGIAFIDTEVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKP 410
K D L +AF+D + Y+ + +K + +VGD + I Y E +SL +D
Sbjct: 1148 KEDGSLLPVAFMDVQCYVNVLKELKGTGMCIVGDAFKGIWFAGYSEEPYKMSLFGKD--- 1204
Query: 411 TQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMIS 470
LE + + + D L + + +++
Sbjct: 1205 ----------------------------------LEYPEVVAA---DFLPDGDKLFILVA 1227
Query: 471 DKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTF---------FKIRCKPSSISD 521
D D N+ + Y+PE S+ G +L+ ++ FH+G +T ++I PS+ SD
Sbjct: 1228 DSDCNLHVLQYEPEDPMSSNGDKLLVRSKFHMGHFTSTLTLLPRTTASYEI---PSADSD 1284
Query: 522 APGARSRFL---TWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRT 578
+ R S G++G +PE++YRRL LQ+ + H GLNPRA+R
Sbjct: 1285 SMEVDPRITPQQVLITSQSGSIGIVTSIPEESYRRLSALQSQLANTVEHPCGLNPRAYRA 1344
Query: 579 YKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEL 628
+ G RG++DG+L++++L +S R+EI ++G+ +I +L
Sbjct: 1345 IESD----GTAGRGMLDGNLLYQWLSMSKQRRMEIAARVGAHEWEIKADL 1390
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 380 ILVGDYARSIALLRYQPE--YRTLSLVARDYK-----PTQPNSKGYYA----GNPSRGII 428
+L+ + SI ++ PE YR LS + P N + Y A G RG++
Sbjct: 1297 VLITSQSGSIGIVTSIPEESYRRLSALQSQLANTVEHPCGLNPRAYRAIESDGTAGRGML 1356
Query: 429 DGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMG 466
DG+L++++L +S R+EI ++G+ +I + ++G
Sbjct: 1357 DGNLLYQWLSMSKQRRMEIAARVGAHEWEIKADLEAVG 1394
>sp|Q2TZ19|CFT1_ASPOR Protein cft1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=cft1 PE=3 SV=1
Length = 1393
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 169/652 (25%), Positives = 298/652 (45%), Gaps = 93/652 (14%)
Query: 16 IVQELLTVSLGLH-GNRPLLLVRTQHE-LLIYQAFRHPKGAL-----KLRFKKLKVLFVS 68
++ E++ LG + P L++R++H+ L +Y+ F ++ L F K L +
Sbjct: 796 VLTEIVVADLGDSWSSFPYLIIRSRHDDLAVYRPFISITKSVGEPHADLNFLKETNLVLP 855
Query: 69 DRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDG 128
+ +Q ++ +R SNI+G+ +F G P ++ TS H + + G
Sbjct: 856 RITSGVEDQSSTEEVIKSVPLRIVSNISGFSAIFRPGVSPGFIVRTSTSS--PHFLGLKG 913
Query: 129 P-VSTLAPFHNVNCPRGFLYFNAKSELRISVLPTH--LSYDA------PWPVRKVPLKCT 179
+L+ F C GF+ ++K I + T+ LS+ PW ++++P+
Sbjct: 914 GYAQSLSKFQTSECGEGFILLDSKVLCFILLCLTYCILSFHTGCHSYYPWTIQQIPIGEQ 973
Query: 180 PHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRD--SRFIPPLVSQFHVSLF 237
LAY + Y I TS +K ED EL + R+ + F P V + + +
Sbjct: 974 VDHLAYSSSSGMYVIGTS----HRTEFKLP-EDDELHPEWRNEMTSFFPE-VQRSSLKVV 1027
Query: 238 SPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRI 297
SP +W I EHV+ +KN+S+E + I +GT + ED+ RG +
Sbjct: 1028 SPKTWTVIDSPA------EHVMAVKNMSLEISENTHERKDMIVVGTAFARGEDIASRGCV 1081
Query: 298 LLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK- 354
+F++I+VVP+P +P K++++ + KG VTA+ + GFL+ A GQK + LK
Sbjct: 1082 YVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQGFLIVAQGQKCIVRGLKE 1141
Query: 355 DNDLTGIAFIDTEVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQ 412
D L +AF+D + +++ + +K + ++ D + + Y E +SL A+D
Sbjct: 1142 DGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGYSEEPYKMSLFAKDL---- 1197
Query: 413 PNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDK 472
+ LE+ D L + + + +++D
Sbjct: 1198 ------------------------------DYLEVLAA------DFLPDGNKLFILVADS 1221
Query: 473 DKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKI-RCKPSS---ISDAPGAR-- 526
D N+ + Y PE +S+ G RL+ ++ FH G ++T + R SS ISD
Sbjct: 1222 DCNLHVLQYDPEDPKSSNGDRLLSRSKFHTGNFISTLTLLPRTSVSSEQMISDVDAMDVD 1281
Query: 527 ---SRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKG 583
R S +G++G + E++YRRL LQ+ + H GLNPRAFR +
Sbjct: 1282 IKIPRHQMLITSQNGSVGLVTCVSEESYRRLSALQSQLTNTIEHPCGLNPRAFRAVESD- 1340
Query: 584 YYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALS 635
G RG++DG L++++L +S ++EI ++G+ +I D EA+S
Sbjct: 1341 ---GTAGRGMLDGKLLFQWLDMSKQRKVEIASRVGANEWEI---KADFEAIS 1386
>sp|Q6BHK3|CFT1_DEBHA Protein CFT1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=CFT1 PE=3 SV=2
Length = 1342
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 252/552 (45%), Gaps = 60/552 (10%)
Query: 88 QMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLY 147
++ YF N+ G+ +F+ G P ++ T+ R T P + AP+ + G +Y
Sbjct: 838 RLVYFPNVNGFTSIFVTGITPYYISKTTHSVPRIFKFT-KLPAVSFAPYSDDKIKNGLIY 896
Query: 148 FNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYK 207
+ RI +P +Y+ WP++K+P+K + + YH + T+ I T P Y
Sbjct: 897 LDNSKNARICEIPVDFNYENNWPIKKIPIKESIKSVTYHELSNTFVISTYEEIP---YDC 953
Query: 208 FNGEDKELVTDPRDSRFIPPLVSQF--HVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVS 265
+ E K +V + P + + ++ L SP++W I L + E + ++++
Sbjct: 954 LDEEGKPIVGVDKSK----PSANSYKGYIKLISPYNWSVIDT--IELVDGEIGMNVQSMV 1007
Query: 266 MEYEGTLSGLRG---YIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIY 322
++ + + I +GT ED++ G +F+II+++PEPG+P T +K K I+
Sbjct: 1008 LDVGSSTKKFKNKKELIVIGTGKYRMEDLSANGSFKIFEIIDIIPEPGKPETNHKFKEIH 1067
Query: 323 AKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILV 382
++ KG VT+IC ++G + + GQKI I L+D+ + +AF+DT VY++ S NL+++
Sbjct: 1068 QEDTKGAVTSICEISGRFLVSQGQKIIIRDLQDDGVVPVAFLDTSVYVSEAKSFGNLLIL 1127
Query: 383 GDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLG 442
GD +SI L + E + ++ +D + N
Sbjct: 1128 GDSLKSIWLAGFDAEPFRMVMLGKDLQSLDVN---------------------------- 1159
Query: 443 ERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHL 502
C K +I +I+D + + L Y PE S+ G RLI K F++
Sbjct: 1160 -----CADFIIKDEEIF-------ILIADNNSTLHLVKYDPEDPTSSNGQRLIHKASFNI 1207
Query: 503 GQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMV 562
T IR P + P + F + +++DG+ P+ E +YRR+ +LQ +
Sbjct: 1208 NS---TPTCIRSIPKNEEINPSSTEVFQSIGSTIDGSFYTVFPINEASYRRMYILQQQIT 1264
Query: 563 THTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK-- 620
H GLNPR R ++ ++D ++ F +L+ R + K+ SK
Sbjct: 1265 DKEYHFCGLNPRLNRFGGLSMTVNDTNTKPLLDYEVIRMFAKLNEDRRKNLSMKVSSKNV 1324
Query: 621 HNDILDELYDIE 632
+ DI +L + +
Sbjct: 1325 YQDIWKDLIEFD 1336
>sp|Q5BDG7|CFT1_EMENI Protein cft1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=cft1 PE=3 SV=1
Length = 1339
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 172/640 (26%), Positives = 295/640 (46%), Gaps = 87/640 (13%)
Query: 17 VQELLTVSLG-LHGNRPLLLVRTQHE-LLIYQAF-RHPKGALKLRFKKLKVLFVSDRSKR 73
V ++ V LG + + P L++RT+++ L++Y+ F + K LRF K +
Sbjct: 759 VLQIAVVELGDSYSSLPFLILRTENDDLVVYKPFFTNSKELTGLRFLKEANHTLPKTPNT 818
Query: 74 ANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGP-VST 132
+E + +R NIAG +F+ GP ++F S H + + G +
Sbjct: 819 TDELQS-----EMKPLRILPNIAGCSSIFMPGPSAGFIFRAST--TSPHFIRLRGGFIKG 871
Query: 133 LAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTY 192
L F + + +GF Y ++ L ++ LP PW +R VP+ L Y + TY
Sbjct: 872 LGCFDSPD--KGFAYLDSHG-LHLAKLPEGTQLGYPWIMRTVPIGQQIDKLTYVSASDTY 928
Query: 193 CIVTSTAEPSTDYYKFN-GEDKELVTDPRDSR--FIPPLVSQFHVSLFSPFSWEEIPQTN 249
+ T +F ED EL + R+ F+P V+Q + + SP +W I +
Sbjct: 929 VLGT------CQRCEFRLPEDDELHPEWRNEEISFLPE-VNQSSLKVVSPKTWSVI--DS 979
Query: 250 FPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEP 309
+PL EH++ +K +S+E R I +GT+ ED+ RG I +F++IEVVP+P
Sbjct: 980 YPLEPAEHIMVMKTMSLEVSENTHERRDMIVVGTSLARGEDIPSRGCIYVFEVIEVVPDP 1039
Query: 310 GQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK-DNDLTGIAFIDT 366
QP T ++K+I + KG VTA+ + GFL+ A GQK + LK D L +AF+D
Sbjct: 1040 EQPETNRRLKLIGKEPVKGAVTALSEIGGQGFLIAAQGQKSMVRGLKEDGSLLPVAFMDM 1099
Query: 367 EVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPS 424
+ +++ + +K + + GD + + Y E +SL A+D
Sbjct: 1100 QCFVSVIKELKGTGMCIFGDAVKGLWFAGYSEEPYKMSLFAKDL---------------- 1143
Query: 425 RGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPE 484
+ LE+ D L + + + +++D D N+ + Y PE
Sbjct: 1144 ------------------DYLEVLAA------DFLPDGNKLFIVVADSDCNLYVLQYDPE 1179
Query: 485 ARESNGGHRLIKKTDFHLGQHVNTFFKI-RCKPSSISDAPGARSRFLTWYASL------- 536
S+ G +L+ ++ FH G +T + R SS G+ + A L
Sbjct: 1180 DPNSSNGDKLLNRSKFHTGNFASTVTLLPRTLVSSERAMSGSDKMDIDNTAPLHQVLVTS 1239
Query: 537 -DGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIID 595
+G++G +PE++YRRL LQ+ + H GLNPRA+R + + RG++D
Sbjct: 1240 HNGSIGLVTCVPEESYRRLSALQSQLTNTLEHPCGLNPRAYRAVESD----ASAGRGMLD 1295
Query: 596 GSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALS 635
+L+ ++L +S + EI ++G+ +I D+EA+S
Sbjct: 1296 SNLLLQYLDMSKQRKAEIAGRVGATEWEI---RADLEAIS 1332
>sp|Q0UUE2|CFT1_PHANO Protein CFT1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=CFT1 PE=3 SV=1
Length = 1375
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 175/628 (27%), Positives = 274/628 (43%), Gaps = 79/628 (12%)
Query: 17 VQELLTVSLGLHGNR-PLLLVRTQHE-LLIYQAFRHPKGAL------KLRFKKLKVLFV- 67
+ E+L LG +R P L+VRT ++ L+IY+A P + LR+ KL V
Sbjct: 800 ITEILAADLGDATSRSPHLIVRTSNDDLVIYKAIHSPSRSSSDLWTHNLRWVKLSQQHVP 859
Query: 68 ----SDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHP 123
+ A ++PG S + NI GY V G PA++ S R
Sbjct: 860 RYMEDGAQEEAADEPGFE-----STLLALDNINGYSTVIQRGRSPAFILKESSSAPRVIG 914
Query: 124 MTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYD-APWPVRKVPLKCTPHF 182
++ PV +L FH +C RGF Y ++ LRIS LP Y W R++P+ H
Sbjct: 915 LS-GNPVKSLTRFHTSSCQRGFAYLDSTDTLRISQLPPSTHYGHLGWAARRMPMDAEVHA 973
Query: 183 LAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSW 242
LAYH + V T +P + Y + D P++ P V + + +W
Sbjct: 974 LAYH---PSGLYVIGTGQP--EEYTLDPNDTFHYELPKEETSFKPKVEHGIIKVMDEKTW 1028
Query: 243 EEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDI 302
I L E +LC+K +++E T + IA+GT ED+ +G I +F++
Sbjct: 1029 TVI--DTHVLDPQEVILCIKTLNLEVSETTHQRKDVIAVGTAIVLGEDLATKGNIRIFEV 1086
Query: 303 IEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK-DNDLT 359
I VVPEP P T ++K+I E KG V+AI + GFL+ A GQK + LK D L
Sbjct: 1087 ITVVPEPDHPETNKRLKLIVKDEVKGTVSAISDLGTQGFLIMAQGQKSMVRGLKEDGTLL 1146
Query: 360 GIAFIDTEVYIASMVSVKN--LILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKG 417
+AF+D + Y+ ++ ++ N ++L+GD + Y E + L R SK
Sbjct: 1147 PVAFMDMQCYVTTLKTLPNTGMLLMGDAYKGAWFTGYTEEPYKMMLFGR--------SKH 1198
Query: 418 YYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVV 477
+ + FL E+L I +++D D N+
Sbjct: 1199 HLE----------CITADFLPFE--EQLHI--------------------IVADADMNLQ 1226
Query: 478 LFMYQPEARESNGGHRLIKKTDFHLGQHVNT--FFKIRCKPSSISDAPGARSRFLTWY-- 533
+ + P+ +S GG RL++K+ FH G +T + R + S+ + + L +
Sbjct: 1227 VLQFDPDHPKSMGGTRLLQKSTFHTGHFPSTMHLLQSRLHMPTASEFTTSTTSSLPLHQI 1286
Query: 534 --ASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYK-GKGYYAGNPS 590
S G L PL E +YRRL L + GLN +AFR +G +
Sbjct: 1287 LCTSQSGTLALITPLSESSYRRLSGLATHLQQFLDSPCGLNGKAFRAADVMEGGWDAGTQ 1346
Query: 591 RGIIDGSLVWKFLQLSLGERLEICKKIG 618
R ++DG L+ ++ +L R E K+G
Sbjct: 1347 RAMLDGGLLMRWGELGEQRRREGLGKVG 1374
>sp|Q7SEY2|CFT1_NEUCR Protein cft-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=cft-1 PE=3 SV=2
Length = 1456
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 175/630 (27%), Positives = 279/630 (44%), Gaps = 77/630 (12%)
Query: 17 VQELLTVSLG--LHGNRPLLLVRTQHELLIYQAFRHPKGALKLRFKKLKVLFV--SDRSK 72
V E+L LG H + L+L +L +YQ +R A + K L V S +K
Sbjct: 844 VAEILVADLGDTTHKSPYLILRHANDDLTLYQPYRLKATAGQPFSKSLFFQKVPNSTFAK 903
Query: 73 RANEQPGLP----RGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDG 128
E+P R MR SNI+GY VFL G P+++ T++ R + G
Sbjct: 904 APEEKPADDDEPHNAQRFLPMRRCSNISGYSTVFLPGSSPSFILKTAKSSPRVLSLQGSG 963
Query: 129 PVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSY-DAPWPVRKVPLKCTPHFLAYHL 187
V ++ FH C GF+Y + R++ +PT SY + V+K+P+ +AYH
Sbjct: 964 -VQAMSSFHTEGCEHGFIYADTNGIARVTQIPTDSSYAELGLSVKKIPIGVDTQSVAYHP 1022
Query: 188 ETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQ 247
T+ Y + + EP ++ +D R++ P+V + + L S +W I
Sbjct: 1023 PTQAYVVGCNDVEP----FELPKDDDYHKEWARENITFKPMVDRGVLKLLSGITWTVIDT 1078
Query: 248 TNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVP 307
+ E VLC++ +++E + + + IA+GT ED+ RGR+ +FDI +V+P
Sbjct: 1079 VE--MEPCETVLCVETLNLEVSESTNERKQLIAVGTALIKGEDLPTRGRVYVFDIADVIP 1136
Query: 308 EPGQPLTKNKIKMIYAKEQ--KGPVTAICHVA--GFLVTAVGQKIYIWQLK-DNDLTGIA 362
EPG+P T K+K++ AKE +G VTA+ V G ++ A GQK + LK D L +A
Sbjct: 1137 EPGKPETSKKLKLV-AKEDIPRGAVTALSEVGTQGLMLVAQGQKCMVRGLKEDGTLLPVA 1195
Query: 363 FIDTEVYIASMVSV--KNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYA 420
F+D Y+ S+ + L L+ D + + Y E + L +
Sbjct: 1196 FMDMNCYVTSVKELPGTGLCLMADAFKGVWFTGYTEEPYKMMLFGKS------------- 1242
Query: 421 GNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFM 480
R+E+ + D L + + + SD D ++ +
Sbjct: 1243 ---------------------STRMEVL------NADFLPDGKELYIVASDADGHIHILQ 1275
Query: 481 YQPEARESNGGHRLIKKTDFHLGQHVNT----FFKIRCKPSSISDAPGARSRFLTWYASL 536
+ PE +S GH L+ +T F+ G H T + PSS+S S + AS
Sbjct: 1276 FDPEHPKSLQGHLLLHRTTFNTGAHHPTSSLLLPAVYPNPSSLSSNSEENSPHILLLASP 1335
Query: 537 DGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFR--------TYKGKGYYAGN 588
G L PL E YRRL L + H GLNP+ +R + + G AG
Sbjct: 1336 TGVLATLRPLQENAYRRLSSLAVQLTNGLPHPAGLNPKGYRLPSPSASASMQLPGVDAGI 1395
Query: 589 PSRGIIDGSLVWKFLQLSLGERLEICKKIG 618
R I+DG ++ +FL+L G+R E+ + G
Sbjct: 1396 -GRNIVDGKILERFLELGTGKRQEMAGRAG 1424
>sp|A2R919|CFT1_ASPNC Protein cft1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=cft1 PE=3 SV=1
Length = 1383
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 170/647 (26%), Positives = 285/647 (44%), Gaps = 131/647 (20%)
Query: 32 PLLLVRTQ-HELLIYQAFRHPKGALK----LRFKKLKVLFVSDRSKRANEQ-PGLPRGVR 85
P L++R++ +L+IY+ F G ++ L+F SK N P +P GV
Sbjct: 818 PYLILRSETDDLIIYKPFVVSTGPVEGIHSLKF-----------SKETNSVLPRIPPGVS 866
Query: 86 ISQ----------MRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAP 135
+Q +R +I+G VF+ G ++ TS H + + G S
Sbjct: 867 STQPSGSDYRARPLRILPDISGLSAVFMPGASAGFIIRTSASA--PHFLRLRGENSR--- 921
Query: 136 FHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIV 195
S +R LP +D W +++V L LAY + Y +
Sbjct: 922 ---------------SSTVRFCKLPPMTRFDYQWTLKRVHLGEQVDHLAYSTSSGMYVLG 966
Query: 196 TSTAEPSTDYYKFNGEDKELVTDPRDS--RFIPPLVSQFHVSLFSPFSWEEIPQTN---- 249
T A TD+ ED EL + R+ F P F + L W+ Q
Sbjct: 967 TCHA---TDFKL--PEDDELHPEWRNEAISFFPSARGSF-IKLV----WDHHLQRQDSVI 1016
Query: 250 --FPLHEW-----EHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDI 302
F LH + E+V+ +KN+S+E + I +GT + ED+ RG I +F++
Sbjct: 1017 LIFHLHSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFARGEDIPSRGCIYVFEV 1076
Query: 303 IEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA--GFLVTAVGQKIYIWQLK-DNDLT 359
++VVP+P P T K+K+I + KG VTA+ + GF++ A GQK + LK D L
Sbjct: 1077 VQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQGQKCMVRGLKEDGSLL 1136
Query: 360 GIAFIDTEVYIASMVSVK--NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKG 417
+AF+D + Y++ + +K + ++GD + + Y E +SL A+D
Sbjct: 1137 PVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKMSLFAKDL--------- 1187
Query: 418 YYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVV 477
+ LE+C + L + + +++D D N+
Sbjct: 1188 -------------------------DYLEVCAA------EFLPDGKRLFIVVADSDCNIH 1216
Query: 478 LFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKI-RCKPSS---ISDAPG-----ARSR 528
+ Y PE +S+ G RL+ ++ FH+G +T + R SS +S + G
Sbjct: 1217 VLQYDPEDPKSSNGDRLLSRSKFHMGNFASTLTLLPRTMVSSEKMVSSSDGMDIDNQSPL 1276
Query: 529 FLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGN 588
+ +G+LG +PE++YRRL LQ+ + H GLNPRAFR + G
Sbjct: 1277 HQVLMTTQNGSLGLITCIPEESYRRLSALQSQLTNTLEHPCGLNPRAFRAVESD----GT 1332
Query: 589 PSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALS 635
RG++DG+L++K++ +S + EI ++G++ +I D+EA+S
Sbjct: 1333 AGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAREWEI---KADLEAIS 1376
>sp|Q6C740|CFT1_YARLI Protein CFT1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CFT1
PE=3 SV=1
Length = 1269
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 155/631 (24%), Positives = 276/631 (43%), Gaps = 95/631 (15%)
Query: 19 ELLTVSLGLHGN----RPLLLVRTQHELLIYQAFRHPKGALKLRFKKLKVLFVSDRSKRA 74
EL+ ++L G+ R L++ T +L++Y+ + + KLRF+K+ +
Sbjct: 719 ELVDIALSPLGDDHILRDYLVLLTPQQLVVYEPYHYND---KLRFRKIFL---------- 765
Query: 75 NEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTID-GPVSTL 133
P + R++Q+ I G + + G A++ + + L P I+ G
Sbjct: 766 ERTPTINSDRRLTQVPL---INGKHTLGVTG-ETAYILVKT---LHTSPRLIEFGETKGA 818
Query: 134 APFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKC--TPHFLAYHLETKT 191
F + + F Y E+ S + WPV+ V L C T + YH
Sbjct: 819 VAFTSWDGK--FAYLTQAGEVAECRFDPSFSLETNWPVKHVQL-CGETISKVTYHETMDV 875
Query: 192 YCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTNFP 251
Y I T P + ED E++ + +P Q + + +P+SW I F
Sbjct: 876 YVIATHKTVP----HVVRDEDDEVI-ESLTPDIMPATTYQGAIRIVNPYSWTVIDSYEFE 930
Query: 252 LHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQ 311
+ E LC ++V + S R +A+GT+ ED+ RG + LFD+IE+VPE +
Sbjct: 931 M-PAEAALCCESVKLSISDRKSQKREVVAVGTSILRGEDLAARGALYLFDVIEIVPEKER 989
Query: 312 PLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDN-DLTGIAFIDTEVYI 370
P T ++K + +G TA+C V+G L+ GQK+ + L+D+ L +AF+D + Y+
Sbjct: 990 PETNRRLKKLVQDRVRGAFTAVCEVSGRLLAVQGQKLLVQALQDDLTLVPVAFLDMQTYV 1049
Query: 371 ASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDG 430
A S+ +++L+GD RS+ + + + + ARD
Sbjct: 1050 AVAKSLNSMLLLGDATRSVQFVGFSMDPYQMIPFARD----------------------- 1086
Query: 431 SLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNG 490
LQ L + C D E ++ F+++D K + + Y P+ +S
Sbjct: 1087 ------LQRVL---VTTC--------DFAIEGENLTFVVADLQKRLHILEYDPDDPQSYS 1129
Query: 491 GHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKN 550
G RL++++ F+ G+ +++ + P RF+ DG++ +P PE
Sbjct: 1130 GARLLRRSVFYSGKVIDSSAMV----------PINEDRFMVIGVCSDGSVTDVVPCPEDA 1179
Query: 551 YRRLLMLQNVMVTHTSHTGGLNPRAFR---TYKGKGYYAGNPSRGIIDGSLVWKFLQLSL 607
YRRL +Q + +H GL+PRA+R G G +P R I+DG + +F L
Sbjct: 1180 YRRLYAIQTQITDKEAHVCGLHPRAYRYDPILPGTG---NSPHRPILDGHTLIRFANLPR 1236
Query: 608 GERLEICKKIGSKHNDILDELYDIEALSSHF 638
++ ++G ++ ++ D+E +S F
Sbjct: 1237 NKQNVYANRLGQRYQQLI--WKDLELISDLF 1265
>sp|P0CM62|CFT1_CRYNJ Protein CFT1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=CFT1 PE=3 SV=1
Length = 1431
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/599 (23%), Positives = 259/599 (43%), Gaps = 74/599 (12%)
Query: 47 AFRHPKGALKLRFKKL--KVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLC 104
A H + +L +RF+K+ ++L +S N LP + F+NI G G F+
Sbjct: 892 ASSHSRRSLAVRFRKVHTQLLPISGGVGTTNGNARLPYTIV-----PFNNIEGLTGAFIT 946
Query: 105 GPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVN--CPRGFLYFNAKSELRISVLPTH 162
G P W+ + AHP+ F +G + + I LP
Sbjct: 947 GEKPHWIISS-----EAHPLRAFALKQAAMAFGKTTHLGGKGEYFIRIEDGSFICYLPPT 1001
Query: 163 LSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDS 222
L+ D P + ++ + + + Y S P Y E+ E+ P
Sbjct: 1002 LNTDFAIPCDRYQMERAYTNITFDPTSAHYVGAASIEVPFQAY----DEEGEIQLGPDGP 1057
Query: 223 RFIPPLVSQFHVSLFSPFS--WEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIA 280
IPP + + LFS S W+ I + + E V+ +++V++E G G R +IA
Sbjct: 1058 DLIPPTNQRSTLELFSQGSDPWKVI--DGYEFDQNEEVMSMESVNLESPGAPGGYRDFIA 1115
Query: 281 LGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKG----PVTAICHV 336
+GT +N+ ED RG +F+I++ V G + K K PV A+ H+
Sbjct: 1116 VGTGFNFGEDRATRGNTYIFEILQTVGPQGGGGPGSVPGWKLVKRTKDPARHPVNAVNHI 1175
Query: 337 AGFLVTAVGQKIYIWQLK-DNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQ 395
G+L+ G K+Y+ L D+ L G+AF+D ++Y ++ KN +L+GD +S + Q
Sbjct: 1176 NGYLLNTNGPKLYVKGLDYDSQLMGLAFLDIQLYATTVKVFKNFMLIGDLCKSFWFVSLQ 1235
Query: 396 PEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKH 455
+ + +++D + +
Sbjct: 1236 EDPYKFTTISKD----------------------------------------LQHVSVVT 1255
Query: 456 NDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCK 515
D L + F+ SD++ ++ + + P +S G RL+ +T++H G T K+ +
Sbjct: 1256 ADFLVHDGQVTFISSDRNGDMRMLDFDPTDPDSLNGERLMLRTEYHAGSAA-TVSKVIAR 1314
Query: 516 PSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRA 575
+ + +++ + YA+ DGAL + + + ++RL ++ + +V + H GLNPRA
Sbjct: 1315 RKTAEEEFAPQTQII--YATADGALTTVVSVKDARFKRLQLVSDQLVRNAQHVAGLNPRA 1372
Query: 576 FRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEAL 634
FRT + S+GI+DG L+ +F +G + E+ ++IG+ D + D++AL
Sbjct: 1373 FRTVRND-LLPRPLSKGILDGQLLNQFALQPIGRQKEMMRQIGT---DAVTVASDLQAL 1427
>sp|P0CM63|CFT1_CRYNB Protein CFT1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=CFT1 PE=3 SV=1
Length = 1431
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/599 (23%), Positives = 259/599 (43%), Gaps = 74/599 (12%)
Query: 47 AFRHPKGALKLRFKKL--KVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLC 104
A H + +L +RF+K+ ++L +S N LP + F+NI G G F+
Sbjct: 892 ASSHSRRSLAVRFRKVHTQLLPISGGVGTTNGNARLPYTIV-----PFNNIEGLTGAFIT 946
Query: 105 GPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVN--CPRGFLYFNAKSELRISVLPTH 162
G P W+ + AHP+ F +G + + I LP
Sbjct: 947 GEKPHWIISS-----EAHPLRAFALKQAAMAFGKTTHLGGKGEYFIRIEDGSFICYLPPT 1001
Query: 163 LSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDS 222
L+ D P + ++ + + + Y S P Y E+ E+ P
Sbjct: 1002 LNTDFAIPCDRYQMERAYTNITFDPTSAHYVGAASIEVPFQAY----DEEGEIQLGPDGP 1057
Query: 223 RFIPPLVSQFHVSLFSPFS--WEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIA 280
IPP + + LFS S W+ I + + E V+ +++V++E G G R +IA
Sbjct: 1058 DLIPPTNQRSTLELFSQGSDPWKVI--DGYEFDQNEEVMSMESVNLESPGAPGGYRDFIA 1115
Query: 281 LGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKG----PVTAICHV 336
+GT +N+ ED RG +F+I++ V G + K K PV A+ H+
Sbjct: 1116 VGTGFNFGEDRATRGNTYIFEILQTVGPQGGGGPGSVPGWKLVKRTKDPARHPVNAVNHI 1175
Query: 337 AGFLVTAVGQKIYIWQLK-DNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQ 395
G+L+ G K+Y+ L D+ L G+AF+D ++Y ++ KN +L+GD +S + Q
Sbjct: 1176 NGYLLNTNGPKLYVKGLDYDSQLMGLAFLDIQLYATTVKVFKNFMLIGDLCKSFWFVSLQ 1235
Query: 396 PEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKH 455
+ + +++D + +
Sbjct: 1236 EDPYKFTTISKD----------------------------------------LQHVSVVT 1255
Query: 456 NDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCK 515
D L + F+ SD++ ++ + + P +S G RL+ +T++H G T K+ +
Sbjct: 1256 ADFLVHDGQVTFISSDRNGDMRMLDFDPTDPDSLNGERLMLRTEYHAGSAA-TVSKVIAR 1314
Query: 516 PSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRA 575
+ + +++ + YA+ DGAL + + + ++RL ++ + +V + H GLNPRA
Sbjct: 1315 RKTAEEEFAPQTQII--YATADGALTTVVSVKDARFKRLQLVSDQLVRNAQHVAGLNPRA 1372
Query: 576 FRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEAL 634
FRT + S+GI+DG L+ +F +G + E+ ++IG+ D + D++AL
Sbjct: 1373 FRTVRND-LLPRPLSKGILDGQLLNQFALQPIGRQKEMMRQIGT---DAVTVASDLQAL 1427
>sp|Q5AFT3|CFT1_CANAL Protein CFT1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=CFT1 PE=3 SV=1
Length = 1420
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/595 (23%), Positives = 250/595 (42%), Gaps = 85/595 (14%)
Query: 59 FKKLKVLFVSDRSKRANEQPGLPRGVRISQ-MRYFSNIAGYQGVFLCGPHPAWLFLTSRG 117
FKK K L ++ A P G I + + YF N+ G+ +F+ G P + T
Sbjct: 858 FKKEKDLTITGAPDNA-----FPYGTSIERRLVYFPNLNGFTSIFVTGVIPYLILKTVHS 912
Query: 118 ELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLK 177
R + +S ++ F + G ++ + + RI LP +Y+ P++ V +
Sbjct: 913 IPRIFQFSKIAAMS-ISAFSDSKIKNGLIFLDNQQNARICELPLDFNYEFNLPMKHVDIG 971
Query: 178 CTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLF 237
+ +AYH + T + T P Y + E K + +D + P + + + L
Sbjct: 972 ESIKSIAYHETSDTVVLSTFKQIP---YDCLDEEGKPIAGIIKDIKDTPAMSFKGSIKLV 1028
Query: 238 SPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSG-----------------LRGYIA 280
SP++W I L + E + LK++ ++ G+ SG R YI
Sbjct: 1029 SPYNWTVIET--IELGDNEVGMTLKSMILDV-GSESGSTLGSDPNSLIKKYNKKKREYIV 1085
Query: 281 LGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFL 340
+G ED+ G +++II+++PEPG+P T +K K I+ +E +G +T+IC ++G
Sbjct: 1086 IGIGKYRMEDLAANGIFKIYEIIDIIPEPGKPETNHKFKEIFKEETRGAITSICELSGRF 1145
Query: 341 VTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRT 400
+ + GQK+ + L+D+ +AF+DT VY++ S NL+++GD + L+ + E
Sbjct: 1146 LVSQGQKVIVRDLQDDGTVPVAFLDTPVYVSESKSFGNLLILGDLLKGCWLVGFDAEPFR 1205
Query: 401 LSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILD 460
+ ++ +D + I + D +
Sbjct: 1206 MIMLGKD----------------------------------------TQHISVECADFII 1225
Query: 461 EFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFK---IRCKPS 517
+ +++D + + L Y P+ +S G +L+ K F L ++ I + S
Sbjct: 1226 NDDEIFVLVADNNNVLHLLNYDPDDPQSINGTKLLTKASFELNSTISCLRSLPLIDIEES 1285
Query: 518 SISDA-----------PGARSRFLTWYASL-DGALGFFLPLPEKNYRRLLMLQNVMVTHT 565
+DA P S + S DG+ P+ E YRR+ +LQ ++
Sbjct: 1286 VQTDALTNIAVPPPLPPNTTSNYFQVIGSTQDGSFFNVFPINEAAYRRMYILQQQLIDKE 1345
Query: 566 SHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 620
H GLNPR R K ++ I+D L+ F +LS + + K+ K
Sbjct: 1346 FHYCGLNPRLNRIGSIKLQNNETNTKPILDYDLIRSFTKLSDDRKRNLANKVSGK 1400
>sp|Q6FSD2|CFT1_CANGA Protein CFT1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=CFT1 PE=3 SV=1
Length = 1361
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 151/574 (26%), Positives = 256/574 (44%), Gaps = 87/574 (15%)
Query: 81 PRGV----RISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPF 136
P+GV RI M Y N GY +F+ G P + M D + + PF
Sbjct: 841 PKGVSGIERI--MHYIPNFDGYSVIFVTGNTPYII------------MKEDDSLPRIFPF 886
Query: 137 HN---VNCPR----GFLYFNAKSELRI-SVLPTHLSYDAPWPVRKVPLKC------TPHF 182
N V+ R + + RI S+ ++ Y P+RK+ + T +
Sbjct: 887 GNIPIVSMSRWGEGSVICIDDIKNARIYSLNQDNIYYGNKLPIRKIKIGSMLQNYKTLNS 946
Query: 183 LAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFH--VSLFSPF 240
+ YH T+ Y +V+ T E S Y+ ED L+ + P F V L +P
Sbjct: 947 IVYHERTQLY-LVSYTKEIS---YEAKAEDGSLLIGYKPEL---PNAKAFKSGVLLINPK 999
Query: 241 SWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLF 300
SWE I + + P + V +K+ ++ + R YI +G Y EDV G ++
Sbjct: 1000 SWEVIDELDLPDNSL--VNDMKSSFIQIDTRTKRKREYIIVGIGYATMEDVPPTGEFHIY 1057
Query: 301 DIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLK-DNDLT 359
DI EVVPEPG+P T K+K I+ ++ +G V+ + ++G + + QKI + ++ DN +
Sbjct: 1058 DITEVVPEPGKPNTNFKLKEIFKEDIRGIVSVVNGISGRFLISQSQKIMVRDVQQDNSVI 1117
Query: 360 GIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYY 419
+AF+D V++ S+ + NLI++GD + I + + E
Sbjct: 1118 PVAFLDVPVFVTSLKTFGNLIVIGDAMQGIQFVGFDAE---------------------- 1155
Query: 420 AGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLF 479
P R I GS + KF +S+ + L + F+++D+D + +
Sbjct: 1156 ---PYRMITLGSSITKFEVISV---------------EFLVNNGDIYFLVTDRDSIMHVL 1197
Query: 480 MYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGA 539
Y P+ + G RL+ + F+L N + D +RS F T A +DG+
Sbjct: 1198 KYAPDQPNTLSGQRLVHCSSFNLHSLNNCTMLLPKNDEFPRDQRYSRS-FQTITAQVDGS 1256
Query: 540 LGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLV 599
+ +P+ E+ YRRL +Q ++ GLNPR R K Y+ G+ R ++D +++
Sbjct: 1257 ISKIVPVKEETYRRLYFIQQQIIDKEPQLAGLNPRMERQ-DNKYYHLGHSLRPMLDFNII 1315
Query: 600 WKFLQLSLGERLEICKKIGSKHN-DILDELYDIE 632
+F +S+ R I +K+G N ++ +L D+E
Sbjct: 1316 KRFKDMSMNRRSHIVQKLGKNSNLEVWRDLIDLE 1349
>sp|Q06632|CFT1_YEAST Protein CFT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CFT1 PE=1 SV=1
Length = 1357
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 231/541 (42%), Gaps = 70/541 (12%)
Query: 89 MRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYF 148
M YF + GY +F+ G P L + + P+ ++ P+ R +
Sbjct: 851 MHYFPDYNGYSVIFVTGSVPYILIKEDDSTPKIFKFG-NIPLVSVTPW----SERSVMCV 905
Query: 149 NAKSELRISVLPT-HLSYDAPWPVRKVPLKC------TPHFLAYHLETKTYCIVTSTAEP 201
+ R+ L T ++ Y P++++ + T L YH + + + P
Sbjct: 906 DDIKNARVYTLTTDNMYYGNKLPLKQIKISNVLDDYKTLQKLVYHERAQLFLVSYCKRVP 965
Query: 202 STDYYKFNGEDKELVTDPRDSRFIPPLVSQFH--VSLFSPFSWEEIPQTNFPLHEWEHVL 259
Y+ GED E V ++ P F + L +P SW+ I + +FP + V
Sbjct: 966 ----YEALGEDGEKVIGYDEN---VPHAEGFQSGILLINPKSWKVIDKIDFPKNSV--VN 1016
Query: 260 CLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIK 319
+++ ++ R YI G +ED G ++D+IEVVPEPG+P T K+K
Sbjct: 1017 EMRSSMIQINSKTKRKREYIIAGVANATTEDTPPTGAFHIYDVIEVVPEPGKPDTNYKLK 1076
Query: 320 MIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLK-DNDLTGIAFIDTEVYIASMVSVKN 378
I+ +E G V+ +C V+G + + QK+ + ++ DN + +AF+D V++ S N
Sbjct: 1077 EIFQEEVSGTVSTVCEVSGRFMISQSQKVLVRDIQEDNSVIPVAFLDIPVFVTDSKSFGN 1136
Query: 379 LILVGDYARSIALLRYQPE-YRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFL 437
L+++GD + + + E YR +SL G + KF
Sbjct: 1137 LLIIGDAMQGFQFIGFDAEPYRMISL--------------------------GRSMSKFQ 1170
Query: 438 QLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKK 497
+SL + L M F +D D+NV + Y P+ S G RL+
Sbjct: 1171 TMSL---------------EFLVNGGDMYFAATDADRNVHVLKYAPDEPNSLSGQRLVHC 1215
Query: 498 TDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLML 557
+ F L N+ + + +P S F +DG++ +PL E+ YRRL ++
Sbjct: 1216 SSFTL-HSTNSCMMLLPRNEEFG-SPQVPS-FQNVGGQVDGSVFKIVPLSEEKYRRLYVI 1272
Query: 558 QNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI 617
Q ++ GGLNPR R Y G+ R ++D +++ +F L++ R I +K
Sbjct: 1273 QQQIIDRELQLGGLNPRMER-LANDFYQMGHSMRPMLDFNVIRRFCGLAIDRRKSIAQKA 1331
Query: 618 G 618
G
Sbjct: 1332 G 1332
>sp|Q75EY8|CFT1_ASHGO Protein CFT1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=CFT1 PE=3 SV=1
Length = 1305
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 209/465 (44%), Gaps = 65/465 (13%)
Query: 179 TPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFS 238
T + + YH T+T+ + + S DY + ED+ LV D I + Q + L S
Sbjct: 885 TLNNITYHERTQTFIV---SYAKSIDYVALSEEDEPLVGYNPDK--IHAMGFQSGIILLS 939
Query: 239 PFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRIL 298
P SWE I + + + + ++ + ++ R Y+ +G Y ED+ G
Sbjct: 940 PKSWEIIDKIEYGKNSL--INDMRTMMIQLNSNTKRRREYLVVGNTYVRDEDIGGTGSFY 997
Query: 299 LFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLK-DND 357
L+DI EVVPEPG+P T K K I+ ++ +G V+ +C ++G + + K + ++ DN
Sbjct: 998 LYDITEVVPEPGKPDTNYKFKDIFQEDIRGTVSTVCEISGRFMISQSSKAMVRDIQEDNS 1057
Query: 358 LTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPE-YRTLSLVARDYKPTQPNSK 416
+ +AF+D V+I S NL+++GD + + L + E YR L+L
Sbjct: 1058 VVPVAFLDMPVFITDAKSFGNLMIIGDSMQGFSFLGFDAEPYRMLTL------------- 1104
Query: 417 GYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNV 476
G V K + C + + D+ F+++D++ +
Sbjct: 1105 -------------GKSVSKLETM--------CVEFLVNNGDVY-------FLVTDRNNLM 1136
Query: 477 VLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWY--- 533
+ Y P+ S G RL+ T F+L NT ++ K +D G SR Y
Sbjct: 1137 HVLKYAPDEPNSLSGQRLVHCTSFNL-HSTNTCMRLIKK----NDEFGKVSRGFGIYMPS 1191
Query: 534 -----ASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGN 588
+ DG + +PL E +YR L ++Q ++ GLNPR R + Y G+
Sbjct: 1192 FQCIGSQADGTIFKVVPLSEASYRSLYLIQQQLIDKEVQLCGLNPRMER-LENPFYQMGH 1250
Query: 589 PSRGIIDGSLVWKFLQLSLGERLEICKKIGSK-HNDILDELYDIE 632
R ++D +++ +F LS+ R+ + K G + H +I +L DIE
Sbjct: 1251 ILRPMLDFTVLKRFATLSIPTRMTMASKAGRQAHAEIWRDLIDIE 1295
>sp|Q6CTT2|CFT1_KLULA Protein CFT1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CFT1 PE=3
SV=1
Length = 1300
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 132/568 (23%), Positives = 242/568 (42%), Gaps = 79/568 (13%)
Query: 81 PRGV-RISQM-RYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPF-- 136
P+GV +I ++ YF N GY VF+ G P + R MT + P+ T+A +
Sbjct: 786 PQGVNKIERVAHYFPNYNGYSVVFITGQVPYIIIKEDNSVCRIFRMT-NIPIVTMARWGK 844
Query: 137 HNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLK-CTPHF-----LAYHLETK 190
++V C N K+ R+ L Y +RK+ ++ F +AYH T
Sbjct: 845 NSVMCVD-----NIKNA-RVMKLDPECYYGNTQILRKIIIEDVVEEFETLGNIAYHERTG 898
Query: 191 TYCIVTSTAEPSTDYYKFNGEDKELV----TDPRDSRFIPPLVSQFHVSLFSPFSWEEIP 246
Y I + +Y + + + LV + P + + L+ L +P +W I
Sbjct: 899 MYII---SYTKFIEYQALSEDGEPLVGYDPSKPNSTGYKSGLL------LINPLTWNIID 949
Query: 247 QTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVV 306
+ + L E V +K + ++ R + +G+++ ED G +L+ DI EVV
Sbjct: 950 RLD--LSENSMVNDIKTMLIQLNSKTRRKRELVIIGSSFVKEEDQPSTGCLLVLDITEVV 1007
Query: 307 PEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLK-DNDLTGIAFID 365
EPG+P + K K ++ +E +G V A+C ++G + K + ++ DN +AF+D
Sbjct: 1008 AEPGKPDSNFKFKQLFEEEIRGSVNAVCEISGRFMIGQSSKALVRDMQEDNSAVPVAFLD 1067
Query: 366 TEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSR 425
V+I S NL+++GD + + + E P R
Sbjct: 1068 MPVFITDAKSFSNLMIIGDSMQGFTFVGFDAE-------------------------PYR 1102
Query: 426 GIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEA 485
I+ G KF ++L + L ++ F+++D+ ++ + Y P+
Sbjct: 1103 MIVLGKSTSKFQVMNL---------------EFLVNNGNINFIVTDRQNHLHVLRYAPDE 1147
Query: 486 RESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLP 545
S G RL+ F++ N + K+ K S ++ DG++ +P
Sbjct: 1148 ANSLSGQRLVHCNSFNMFT-TNNYMKLVRKHVEFG---SKTSNYIALGCQTDGSIFRMIP 1203
Query: 546 LPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQL 605
L E +YRR ++Q ++ H G N + R + Y+ G+ R +D ++ K++ L
Sbjct: 1204 LNEASYRRFYLVQQQLLDHEIPLAGFNTKMER-LDNEYYHKGHSLRPTLDSQVLKKYIHL 1262
Query: 606 SLGERLEICKKIGS-KHNDILDELYDIE 632
+ +R I ++G ++ +L DIE
Sbjct: 1263 PITKRTTIENRVGRHASTELWHDLIDIE 1290
>sp|O49552|DDB1B_ARATH DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=2
SV=2
Length = 1088
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 218/546 (39%), Gaps = 116/546 (21%)
Query: 83 GVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCP 142
G R +R FS+ + VF PA ++ ++ L ++ + VS + PF++ P
Sbjct: 626 GTRPITLRTFSSKSATH-VFAASDRPAVIYSNNKKLLYSNVNLKE--VSHMCPFNSAAFP 682
Query: 143 RGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPS 202
L + EL I + +R +P+ + + +T+T+ I EPS
Sbjct: 683 DS-LAIAREGELTIGTIDDI----QKLHIRTIPIGEHARRICHQEQTRTFAISCLRNEPS 737
Query: 203 TDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLK 262
+ +S F+ L +Q S+E + +++PL +E +
Sbjct: 738 AE--------------ESESHFVRLLDAQ---------SFEFL--SSYPLDAFECGCSIL 772
Query: 263 NVSMEYEGTLSGLRGYIALGTNYNY-SEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMI 321
+ S + + Y +GT Y E+ +GRIL+F I+E + ++++I
Sbjct: 773 SCSFTDDKNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------EGRLQLI 816
Query: 322 YAKEQKGPVTAICHVAGFLVTAVGQKI--YIWQLKDNDLTGIAFIDTEV-----YIASMV 374
KE KG V ++ G L+ ++ QKI Y W L+D+ G + +E +A V
Sbjct: 817 TEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYV 873
Query: 375 SVK-NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLV 433
+ + I VGD +SI+LL Y+ E + ARDY
Sbjct: 874 QTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNAN---------------------- 911
Query: 434 WKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR 493
W +EI ++DI ++ +D N+ E R
Sbjct: 912 WM-------TAVEIL------NDDI--------YLGTDNCFNIFTVKKNNEGATDEERAR 950
Query: 494 LIKKTDFHLGQHVNTF----FKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEK 549
+ ++H+G+ VN F ++ S I P + ++ G +G LP++
Sbjct: 951 MEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQIP------TVIFGTVSGMIGVIASLPQE 1004
Query: 550 NYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGE 609
Y L LQ + GGL+ +R++ + A ++G +DG L+ FL LS G+
Sbjct: 1005 QYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTA--EAKGYLDGDLIESFLDLSRGK 1062
Query: 610 RLEICK 615
EI K
Sbjct: 1063 MEEISK 1068
>sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1
SV=1
Length = 1088
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 223/559 (39%), Gaps = 116/559 (20%)
Query: 89 MRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYF 148
+R FS+ + VF P ++ +++ L ++ + VS + PF++ P L
Sbjct: 632 LRTFSSKSATH-VFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDS-LAI 687
Query: 149 NAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKF 208
+ EL I + +R +PL + + +T+T+ I + +
Sbjct: 688 AREGELTIGTIDDI----QKLHIRTIPLGEHARRICHQEQTRTFGICSLGNQS------- 736
Query: 209 NGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEY 268
N E+ E+ F+ L Q F + + +PL +E+ + + S
Sbjct: 737 NSEESEM-------HFVRLLDDQ-------TFEF----MSTYPLDSFEYGCSILSCSFTE 778
Query: 269 EGTLSGLRGYIALGTNYNY-SEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQK 327
+ + Y +GT Y E+ +GRIL+F I+E ++++I KE K
Sbjct: 779 DKNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGRLQLIAEKETK 822
Query: 328 GPVTAICHVAGFLVTAVGQKI--YIWQLKDNDLTGIAFIDTEV-----YIASMVSVK-NL 379
G V ++ G L+ A+ QKI Y W L+D+ G + +E +A V + +
Sbjct: 823 GAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDF 879
Query: 380 ILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQL 439
I+VGD +SI+LL Y+ E + ARDY ++
Sbjct: 880 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAV----------------------- 916
Query: 440 SLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTD 499
+ILD+ +G ++ + N++ E RL +
Sbjct: 917 -----------------EILDDDIYLG---AENNFNLLTVKKNSEGATDEERGRLEVVGE 956
Query: 500 FHLGQHVNTF----FKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLL 555
+HLG+ VN F +R S I P + +++G +G LP++ Y L
Sbjct: 957 YHLGEFVNRFRHGSLVMRLPDSEIGQIP------TVIFGTVNGVIGVIASLPQEQYTFLE 1010
Query: 556 MLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICK 615
LQ+ + GGL+ +R++ + A +R +DG L+ FL LS + +I K
Sbjct: 1011 KLQSSLRKVIKGVGGLSHEQWRSFNNEKRTA--EARNFLDGDLIESFLDLSRNKMEDISK 1068
Query: 616 KIGSKHNDILDELYDIEAL 634
+ + ++ + ++ L
Sbjct: 1069 SMNVQVEELCKRVEELTRL 1087
>sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1
SV=1
Length = 1090
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 192/499 (38%), Gaps = 107/499 (21%)
Query: 130 VSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLET 189
VS + PF+ P L + EL I + +R +PL +++ +T
Sbjct: 670 VSHMCPFNVAAFPDS-LAIAKEGELTIGTIDEI----QKLHIRSIPLGEHARRISHQEQT 724
Query: 190 KTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTN 249
+T+ + S Y + N +D E+ V L ++E I +
Sbjct: 725 RTFALC------SVKYTQSNADDPEM----------------HFVRLLDDQTFEFI--ST 760
Query: 250 FPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNY-SEDVTCRGRILLFDIIEVVPE 308
+PL ++E+ + + S + + Y +GT Y E+ +GRIL+F I+E
Sbjct: 761 YPLDQFEYGCSILSCSFSDDSNV-----YYCIGTAYVMPEENEPTKGRILVF-IVE---- 810
Query: 309 PGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEV 368
K+++I KE KG V ++ G L+ A+ QKI +++ + G + TE
Sbjct: 811 ------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTEC 864
Query: 369 -----YIASMVSVK-NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGN 422
+A V + + I+VGD +SI+LL ++ E + ARDY ++
Sbjct: 865 GHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAV------ 918
Query: 423 PSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQ 482
+ILD+ +G ++ + N+
Sbjct: 919 ----------------------------------EILDDDIYLG---AENNFNLFTVRKN 941
Query: 483 PEARESNGGHRLIKKTDFHLGQHVNTF----FKIRCKPSSISDAPGARSRFLTWYASLDG 538
E RL ++HLG+ VN F +R S + P + +++G
Sbjct: 942 SEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNG 995
Query: 539 ALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSL 598
+G LP Y L LQ + GGL+ +R++ + ++ +DG L
Sbjct: 996 VIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTV--DAKNFLDGDL 1053
Query: 599 VWKFLQLSLGERLEICKKI 617
+ FL LS EI K +
Sbjct: 1054 IESFLDLSRNRMEEISKAM 1072
>sp|Q6E7D1|DDB1_SOLCE DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1
Length = 1095
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 192/499 (38%), Gaps = 107/499 (21%)
Query: 130 VSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLET 189
VS + PF+ P L + EL I + +R +PL +++ +T
Sbjct: 675 VSHMCPFNVAAFPDS-LAIAKEGELTIGTIDEI----QKLHIRSIPLGEHARRISHQEQT 729
Query: 190 KTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTN 249
+T+ + S Y + N +D E+ V L ++E I +
Sbjct: 730 RTFALC------SVKYTQSNADDPEM----------------HFVRLLDDQTFEFI--ST 765
Query: 250 FPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNY-SEDVTCRGRILLFDIIEVVPE 308
+PL ++E+ + + S + + Y +GT Y E+ +GRIL+F I+E
Sbjct: 766 YPLDQFEYGCSILSCSFSDDSNV-----YYCIGTAYVMPEENEPTKGRILVF-IVE---- 815
Query: 309 PGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEV 368
K+++I KE KG V ++ G L+ A+ QKI +++ + G + TE
Sbjct: 816 ------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTEC 869
Query: 369 -----YIASMVSVK-NLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGN 422
+A V + + I+VGD +SI+LL ++ E + ARDY ++
Sbjct: 870 GHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAV------ 923
Query: 423 PSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQ 482
+ILD+ +G ++ + N+
Sbjct: 924 ----------------------------------EILDDDIYLG---AENNFNLFTVRKN 946
Query: 483 PEARESNGGHRLIKKTDFHLGQHVNTF----FKIRCKPSSISDAPGARSRFLTWYASLDG 538
E RL ++HLG+ VN F +R S + P + +++G
Sbjct: 947 SEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNG 1000
Query: 539 ALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSL 598
+G LP Y L LQ + GGL+ +R++ + ++ +DG L
Sbjct: 1001 VIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTV--DAKNFLDGDL 1058
Query: 599 VWKFLQLSLGERLEICKKI 617
+ FL LS EI K +
Sbjct: 1059 IESFLDLSRNRMEEISKAM 1077
>sp|Q16531|DDB1_HUMAN DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1
Length = 1140
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 140/368 (38%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y E+ + GRI++F + K++ + KE KG V ++
Sbjct: 828 YFIVGTAMVYPEEAEPKQGRIVVFQ-----------YSDGKLQTVAEKEVKGAVYSMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 1124
Query: 624 ILDELYDI 631
D+L +
Sbjct: 1125 TADDLIKV 1132
>sp|P33194|DDB1_CHLAE DNA damage-binding protein 1 OS=Chlorocebus aethiops GN=DDB1 PE=1
SV=1
Length = 1140
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 140/368 (38%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y E+ + GRI++F + K++ + KE KG V ++
Sbjct: 828 YFIVGTAMVYPEEAEPKQGRIVVFQ-----------YSDGKLQTVAEKEVKGAVYSMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 1124
Query: 624 ILDELYDI 631
D+L +
Sbjct: 1125 TADDLIKV 1132
>sp|Q3U1J4|DDB1_MOUSE DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2
Length = 1140
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 140/368 (38%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y E+ + GRI++F + K++ + KE KG V ++
Sbjct: 828 YFIVGTAMVYPEEAEPKQGRIVVFQ-----------YSDGKLQTVAEKEVKGAVYSMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 1124
Query: 624 ILDELYDI 631
D+L +
Sbjct: 1125 TADDLIKV 1132
>sp|A1A4K3|DDB1_BOVIN DNA damage-binding protein 1 OS=Bos taurus GN=DDB1 PE=2 SV=1
Length = 1140
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 140/368 (38%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y E+ + GRI++F + K++ + KE KG V ++
Sbjct: 828 YFIVGTAMVYPEEAEPKQGRIVVFQ-----------YSDGKLQTVAEKEVKGAVYSMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 1124
Query: 624 ILDELYDI 631
D+L +
Sbjct: 1125 TADDLIKV 1132
>sp|Q5R649|DDB1_PONAB DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1
Length = 1140
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 139/368 (37%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y E+ + GRI++F + K++ + KE KG V +
Sbjct: 828 YFIVGTAMVYPEEAEPKQGRIVVFQ-----------YSDGKLQTVAEKEVKGAVYPMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 1124
Query: 624 ILDELYDI 631
D+L +
Sbjct: 1125 TADDLIKV 1132
>sp|Q6P6Z0|DDB1_XENLA DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1
Length = 1140
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 140/368 (38%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y ++ + GRI++F K++ + KE KG V ++
Sbjct: 828 YFVVGTAMVYPDEAEPKQGRIVVFQ-----------YNDGKLQTVAEKEVKGAVYSMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTAEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGETSPPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRET 1124
Query: 624 ILDELYDI 631
+D+L +
Sbjct: 1125 TVDDLIKV 1132
>sp|Q805F9|DDB1_CHICK DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1
Length = 1140
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 125/607 (20%), Positives = 227/607 (37%), Gaps = 111/607 (18%)
Query: 53 GALKLRFKKLKVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLF 112
GAL L+ +SDR K + G + + +R F +++ VF C P ++
Sbjct: 609 GALFYFGLSLETGLLSDRKK-------VTLGTQPTVLRTFRSLS-TTNVFACSDRPTVIY 660
Query: 113 LTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVR 172
+S +L + + V+ + P ++ P N S L I + +R
Sbjct: 661 -SSNHKLVFSNVNLK-EVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEI----QKLHIR 713
Query: 173 KVPLKCTPHFLAYHLETKTYCIVTS-----TAEPSTDYYKFNGEDKELVTDPRDSRFIPP 227
VPL +P + Y ++ + +++S A T + + + L + S+
Sbjct: 714 TVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSS 773
Query: 228 LVSQFHVSLFSPFSWEEIPQTNFPL---HEWEHVLCLKNVSMEYEGTLSGLR------GY 278
+ S EE+ N + H +E + + + EY +L + Y
Sbjct: 774 STAPHETSF-----GEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTY 828
Query: 279 IALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA 337
+GT Y E+ + GRI++F + K++ + KE KG V ++
Sbjct: 829 FIVGTAMVYPEEAEPKQGRIVVFH-----------YSDGKLQSLAEKEVKGAVYSMVEFN 877
Query: 338 GFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQ 395
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y+
Sbjct: 878 GKLLASINSTVRLYEWTAEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAYK 936
Query: 396 PEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKH 455
P +ARD+ P W
Sbjct: 937 PMEGNFEEIARDFNPN----------------------WM------------------SA 956
Query: 456 NDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKIR 513
+ILD+ + +G + LF+ Q ++ + R L + HLG+ VN F
Sbjct: 957 VEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVF---- 1007
Query: 514 CKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGG 570
C S + G S + + +++G +G L E Y LL +QN + G
Sbjct: 1008 CHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGK 1067
Query: 571 LNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHNDI 624
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1068 IEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREAT 1125
Query: 625 LDELYDI 631
+D+L I
Sbjct: 1126 VDDLIKI 1132
>sp|Q9ESW0|DDB1_RAT DNA damage-binding protein 1 OS=Rattus norvegicus GN=Ddb1 PE=2 SV=1
Length = 1140
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 139/368 (37%), Gaps = 77/368 (20%)
Query: 278 YIALGTNYNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHV 336
Y +GT Y E+ + GRI++F + K++ + KE KG V ++
Sbjct: 828 YFIVGTAMVYPEEAEPKQGRIVVFQ-----------YSGGKLQTVAEKEVKGAVYSMVEF 876
Query: 337 AGFLVTAVGQ--KIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRY 394
G L+ ++ ++Y W + T + + + + + ILVGD RS+ LL Y
Sbjct: 877 NGKLLASINSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 935
Query: 395 QPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSK 454
+P +ARD+ P W
Sbjct: 936 KPMEGNFEEIARDFNPN----------------------WM------------------S 955
Query: 455 HNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKI 512
+ILD+ + +G + LF+ Q ++ + R L + FHLG+ VN F
Sbjct: 956 AVEILDDDNFLG-----AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF--- 1007
Query: 513 RCKPSSISDAPGARS---RFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTG 569
C S + G S + +++G +G L E Y LL +QN + G
Sbjct: 1008 -CHGSLVMQNLGETSTPTQGSVLLGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVG 1066
Query: 570 GLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI------GSKHND 623
+ +R++ + P+ G IDG L+ FL +S + E+ + G K
Sbjct: 1067 KIEHSFWRSFHTE--RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 1124
Query: 624 ILDELYDI 631
D+L +
Sbjct: 1125 TADDLIKV 1132
>sp|Q5A7S5|RSE1_CANAL Pre-mRNA-splicing factor RSE1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=RSE1 PE=3 SV=1
Length = 1219
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 492 HRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNY 551
++L +FH+G + T F + C + G S Y L G +G +PL K+
Sbjct: 1089 YKLQNLIEFHIGDII-TSFNLGCL-----NLAGTES---VIYTGLQGTIGLLIPLVSKSE 1139
Query: 552 RRLLM-LQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGER 610
LL LQ M ++ G + R+Y NP + +IDG L+ +FL+ + +
Sbjct: 1140 VELLFNLQLYMQQSQNNLVGKDHLKLRSYY-------NPIKNVIDGDLLERFLEFDISLK 1192
Query: 611 LEICKKIGSKHNDILDELYDIEALSS 636
+EI +K+ NDI +L D+ S+
Sbjct: 1193 IEISRKLNKSVNDIEKKLIDLRNRSA 1218
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 416 KGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDI 458
+ YY NP + +IDG L+ +FL+ + ++EI +K+ NDI
Sbjct: 1166 RSYY--NPIKNVIDGDLLERFLEFDISLKIEISRKLNKSVNDI 1206
>sp|Q9XYZ5|DDB1_DROME DNA damage-binding protein 1 OS=Drosophila melanogaster GN=pic PE=1
SV=1
Length = 1140
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 119/318 (37%), Gaps = 68/318 (21%)
Query: 305 VVPEPGQPLT---------KNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQ--KIYIWQL 353
V+PE +P +NK+ + + G A+ G ++ +G ++Y W
Sbjct: 837 VIPEEPEPKVGRIIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT- 895
Query: 354 KDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQP 413
+ +L I + + + + ILVGD RSI LL+++ +ARD +P
Sbjct: 896 NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPK-- 953
Query: 414 NSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKD 473
W + +ILD+ + +G +
Sbjct: 954 --------------------WM------------------RAVEILDDDTFLG-----SE 970
Query: 474 KNVVLFMYQPEARESNGGHR--LIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFL- 530
N LF+ Q ++ + R L + FHLG VN F S + G R+ +
Sbjct: 971 TNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRH----GSLVMQNVGERTTPIN 1026
Query: 531 --TWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGN 588
Y + +GA+G +P+ Y L L+ + G + +R ++
Sbjct: 1027 GCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINSKV--E 1084
Query: 589 PSRGIIDGSLVWKFLQLS 606
PS G IDG L+ FL LS
Sbjct: 1085 PSEGFIDGDLIESFLDLS 1102
>sp|Q54SA7|SF3B3_DICDI Probable splicing factor 3B subunit 3 OS=Dictyostelium discoideum
GN=sf3b3 PE=3 SV=1
Length = 1256
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 51/323 (15%)
Query: 317 KIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSV 376
K++++Y E + PV A+ G LV VG+ I I+ + L + +T+ ++V++
Sbjct: 975 KLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMGKKKL--LRKCETKNLPNTIVNI 1032
Query: 377 KNL---ILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLV 433
+L ++VGD SI ++Y+ L + A D P S + G
Sbjct: 1033 HSLGDRLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVAG------- 1085
Query: 434 WKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDK-DKNVVLFMYQPEARESNGG- 491
K +I + +ISD+ +++ + E+ NG
Sbjct: 1086 ------------------ADKFGNIF--VLRLPLLISDEVEEDPTGTKLKFESGTLNGAP 1125
Query: 492 HRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEK-N 550
H+L +F +G V T K S + P + Y ++ GA+G +P + +
Sbjct: 1126 HKLDHIANFFVGDTVTTL----NKTSLVVGGPE-----VILYTTISGAIGALIPFTSRED 1176
Query: 551 YRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGER 610
L+ M + G + A+R+Y Y+ P + IIDG L +F L+ ++
Sbjct: 1177 VDFFSTLEMNMRSDCLPLCGRDHLAYRSY----YF---PVKNIIDGDLCEQFSTLNYQKQ 1229
Query: 611 LEICKKIGSKHNDILDELYDIEA 633
L I +++ ++++ +L +I +
Sbjct: 1230 LSISEELSRSPSEVIKKLEEIRS 1252
>sp|O13807|DDB1_SCHPO DNA damage-binding protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ddb1 PE=1 SV=1
Length = 1072
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 129/329 (39%), Gaps = 65/329 (19%)
Query: 279 IALGTNYNY-SEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVA 337
+ +GT +N+ +D GR+++F++ + N I+M + +G V +
Sbjct: 770 VVVGTGFNFPDQDAPDSGRLMVFEMT----------SDNNIEMQAEHKVQGSVNTLVLYK 819
Query: 338 GFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPE 397
+V + + I++ + + I T Y + ++ I+ D +SI +L++ +
Sbjct: 820 HLIVAGINASVCIFEYEHGTMHVRNSIRTPTYTIDISVNQDEIIAADLMKSITVLQFIDD 879
Query: 398 YRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHND 457
L VARDY P +W L ER
Sbjct: 880 --QLIEVARDYHP----------------------LWATSVEILSER------------- 902
Query: 458 ILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIR-CKP 516
+ +++ D N V+ + + + + +L F+LG+ +N K R C
Sbjct: 903 --------KYFVTEADGNAVILLRDNVSPQLSDRKKLRWYKKFYLGELIN---KTRHCTF 951
Query: 517 SSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAF 576
D + L A++DG+L N LL LQ+ + GGL+ + +
Sbjct: 952 IEPQDKSLVTPQLLC--ATVDGSLMIVGDAGMSNTPLLLQLQDNIRKVIPSFGGLSHKEW 1009
Query: 577 RTYKGKGYYAGNPSRGIIDGSLVWKFLQL 605
+ Y+G+ +PS +IDGSL+ L L
Sbjct: 1010 KEYRGEN--ETSPS-DLIDGSLIESILGL 1035
>sp|Q9KEE7|ARAN_BACHD Probable arabinose-binding protein OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=araN PE=3 SV=1
Length = 445
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 36/158 (22%)
Query: 90 RYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFN 149
R+ N+ G L P PAW G R+ M G V T H + FL +
Sbjct: 288 RFLDNMPDLAGKMLIQPLPAW----EEGGFRSAGMGGTGTVVTNQTDHE-ELAKDFLAYA 342
Query: 150 AKSELRISVLPTHLSYDAP-WPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKF 208
SE L T L +D P W V P+ + D+Y+F
Sbjct: 343 KISEKANEKLWTILGFDPPRWDVWDNPV----------------------FQEDNDFYQF 380
Query: 209 NGEDK-ELVTDPRD-------SRFIPPLVSQFHVSLFS 238
GE+ E++ D RD S++ P + ++F ++F+
Sbjct: 381 FGENIFEVLLDVRDEINSINISQYTPSVANEFSTNIFN 418
>sp|B0M0P5|DDB1_DICDI DNA damage-binding protein 1 OS=Dictyostelium discoideum GN=repE PE=1
SV=1
Length = 1181
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 500 FHLGQHVNTFFKIRCKPSSISDAPGARSRFL--TWYASLDGALGFFLPLPEKNYRRLLML 557
+H+G+ +N+ + S+ P + + YAS++G++G + E+++ L
Sbjct: 1050 YHIGESINSM-----RHGSLVRLPDSDQPIIPTILYASVNGSIGVVASISEEDFIFFSKL 1104
Query: 558 QNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKI 617
Q + GG + +R + + S+ IDG L+ FL L +L+ +
Sbjct: 1105 QKGLNQVVRGVGGFSHETWRAFSNDHHTI--DSKNFIDGDLIETFLDLKYESQLKAVADL 1162
Query: 618 GSKHND 623
G +D
Sbjct: 1163 GITPDD 1168
>sp|Q6BYK1|RSE1_DEBHA Pre-mRNA-splicing factor RSE1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RSE1 PE=3 SV=2
Length = 1256
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 473 DKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTW 532
DK+ L YQ E+ + G RL +F+L Q + T F + S G + +
Sbjct: 1095 DKDWSLLRYQ-ESYLNGSGSRLKNICEFYL-QDIPTSF------TKGSLVMGGKESII-- 1144
Query: 533 YASLDGALGFFLPLPEKNYRRLL-MLQNVMVTHTSHT--------GGLNPRAFRTYKGKG 583
Y + G LG LPL +N + L LQ ++ + + G N K +
Sbjct: 1145 YTGIQGTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDKNGYNLLGKDHLKFRS 1204
Query: 584 YYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIG 618
YY NP + ++DG L+ +F +LS ++ I ++
Sbjct: 1205 YY--NPVKNVMDGDLIERFYELSQSMKIRIGTELN 1237
>sp|Q21554|DDB1_CAEEL DNA damage-binding protein 1 OS=Caenorhabditis elegans GN=ddb-1
PE=1 SV=2
Length = 1134
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 23/247 (9%)
Query: 171 VRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVS 230
VR +P+ + +AY T TY + ++ E + + LVT +
Sbjct: 714 VRSIPMGESVLRIAYQKSTSTYGVCSNRTESKAE--RVFASKNALVTSQSRPKVASTRAD 771
Query: 231 QFHVSLFSPFSWEEIPQTNFPL---HE---WEHVLCLKNVSMEYEGTLSGLRGYIALGTN 284
+ S+ + Q F + HE WE L +S ++ S Y +GT
Sbjct: 772 MDESPPNTTSSFMVLDQNTFQVLHSHEFGPWETALSC--ISGQFTNDSST---YYVVGTG 826
Query: 285 YNYSEDVTCR-GRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTA 343
Y ++ + GRI++F++ +V ++K++ ++ +G AI + G LV A
Sbjct: 827 LIYPDETETKIGRIVVFEVDDV--------ERSKLRRVHELVVRGSPLAIRILNGKLVAA 878
Query: 344 VGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNL-ILVGDYARSIALLRYQPEYRTLS 402
+ I +++ + + IA + V N + V D RS++LL Y+
Sbjct: 879 INSSIRLFEWTTDKELRLECSSFNHVIALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFE 938
Query: 403 LVARDYK 409
VA+D+
Sbjct: 939 EVAKDWN 945
>sp|Q04693|RSE1_YEAST Pre-mRNA-splicing factor RSE1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSE1 PE=1 SV=1
Length = 1361
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 318 IKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVK 377
I++++ E P+ A+ FL+TA+G I ++ L L + T V I +VS+
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078
Query: 378 NL----ILVGDYARSIALLRYQP 396
+ VGD S+ L + P
Sbjct: 1079 QWNYERLAVGDIHESVTLFIWDP 1101
>sp|O74563|BRL2_SCHPO E3 ubiquitin-protein ligase brl2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=brl2 PE=1 SV=1
Length = 680
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 437 LQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIK 496
L LSL ++LE K+ + D LDE +++ M+ +K K V RE+ RL+
Sbjct: 367 LSLSLEKKLEAKKQKEKVYKDKLDELANLETMVLEKKKAVA-------TREAANKIRLVD 419
Query: 497 KTDFHLGQHVNTFF 510
D L + ++T+
Sbjct: 420 LNDLELQKDLSTYL 433
>sp|A8ETA7|GUAA_ARCB4 GMP synthase [glutamine-hydrolyzing] OS=Arcobacter butzleri (strain
RM4018) GN=guaA PE=3 SV=1
Length = 511
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 429 DGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARES 488
DG +VW +S G+R+E I + I +S I+D ++N+ F + PE S
Sbjct: 123 DGQIVW----MSHGDRVE---NIPAGFEKIATSENSPFAAIADINRNIYAFQFHPEVYHS 175
Query: 489 NGGHRLIKKTDFHL 502
G +L+K H+
Sbjct: 176 QEGSKLLKNFAKHI 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,461,870
Number of Sequences: 539616
Number of extensions: 11217868
Number of successful extensions: 20718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 20500
Number of HSP's gapped (non-prelim): 130
length of query: 638
length of database: 191,569,459
effective HSP length: 124
effective length of query: 514
effective length of database: 124,657,075
effective search space: 64073736550
effective search space used: 64073736550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)