RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy92
         (638 letters)



>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon
           Thermoplasma acidophilum [TaxId: 2303]}
          Length = 196

 Score = 27.2 bits (59), Expect = 4.5
 Identities = 4/49 (8%), Positives = 12/49 (24%)

Query: 448 CKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIK 496
              +           +        K + +    + PE   +  G  + +
Sbjct: 133 IINLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFR 181


>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG
           {Serratia marcescens [TaxId: 615]}
          Length = 192

 Score = 27.1 bits (59), Expect = 5.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 469 ISDKDKNVVLFMYQPEARESNGGHRLIKK 497
           + D  + V  F + PE+  +  G RL+++
Sbjct: 156 VRDDRRRVCGFQFHPESILTTHGARLLEQ 184


>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon
           Pyrococcus horikoshii [TaxId: 53953]}
          Length = 188

 Score = 26.5 bits (57), Expect = 7.5
 Identities = 3/31 (9%), Positives = 12/31 (38%)

Query: 467 FMISDKDKNVVLFMYQPEARESNGGHRLIKK 497
             +  ++  +    + PE   +  G  +++ 
Sbjct: 151 EAMKHEELPIYGVQFHPEVAHTEKGEEILRN 181


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0458    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,427,971
Number of extensions: 116559
Number of successful extensions: 266
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 6
Length of query: 638
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 547
Effective length of database: 1,158,166
Effective search space: 633516802
Effective search space used: 633516802
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.0 bits)