Query psy9201
Match_columns 264
No_of_seqs 214 out of 1531
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 21:30:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y1n_A E3 ubiquitin-protein li 100.0 5.7E-37 1.9E-41 292.5 3.8 173 71-253 204-386 (389)
2 3bux_B E3 ubiquitin-protein li 100.0 1.5E-35 5E-40 274.6 -2.4 92 71-172 228-329 (329)
3 3op0_A Signal transduction pro 100.0 2.9E-35 1E-39 271.5 -3.4 94 71-174 213-316 (323)
4 1t1h_A Gspef-atpub14, armadill 99.4 6.6E-13 2.3E-17 97.5 5.2 54 201-254 10-63 (78)
5 2ecy_A TNF receptor-associated 99.3 4.6E-13 1.6E-17 95.8 3.9 49 201-249 17-65 (66)
6 2xeu_A Ring finger protein 4; 99.3 4.1E-13 1.4E-17 94.2 3.5 52 201-253 5-63 (64)
7 3ng2_A RNF4, snurf, ring finge 99.3 3.7E-13 1.3E-17 96.7 3.3 52 201-253 12-70 (71)
8 2ysl_A Tripartite motif-contai 99.3 1.4E-12 4.8E-17 94.3 4.5 49 201-249 22-72 (73)
9 3lrq_A E3 ubiquitin-protein li 99.3 1.5E-12 5.1E-17 101.0 4.6 55 201-255 24-79 (100)
10 1g25_A CDK-activating kinase a 99.3 1.4E-12 4.7E-17 93.0 3.9 54 201-254 5-63 (65)
11 2djb_A Polycomb group ring fin 99.3 2E-12 6.8E-17 94.1 4.4 52 201-253 17-69 (72)
12 2egp_A Tripartite motif-contai 99.3 1.2E-12 4.2E-17 95.8 2.5 53 201-253 14-72 (79)
13 2d8t_A Dactylidin, ring finger 99.3 1.9E-12 6.5E-17 94.0 2.8 49 201-250 17-65 (71)
14 2ct2_A Tripartite motif protei 99.3 2.8E-12 9.7E-17 95.4 3.8 51 201-251 17-73 (88)
15 2ecw_A Tripartite motif-contai 99.2 4.1E-12 1.4E-16 93.4 4.4 54 201-254 21-79 (85)
16 2yur_A Retinoblastoma-binding 99.2 3.8E-12 1.3E-16 93.3 3.8 47 201-247 17-65 (74)
17 4ayc_A E3 ubiquitin-protein li 99.2 4.2E-12 1.5E-16 103.5 4.4 46 201-247 55-100 (138)
18 2ecv_A Tripartite motif-contai 99.2 4.5E-12 1.5E-16 93.2 3.7 54 201-254 21-79 (85)
19 3fl2_A E3 ubiquitin-protein li 99.2 5.8E-12 2E-16 100.5 4.3 46 201-246 54-99 (124)
20 1jm7_A BRCA1, breast cancer ty 99.2 7.1E-12 2.4E-16 97.3 4.5 54 201-254 23-78 (112)
21 2csy_A Zinc finger protein 183 99.2 7.7E-12 2.6E-16 92.7 4.3 44 201-245 17-60 (81)
22 3ztg_A E3 ubiquitin-protein li 99.2 9.9E-12 3.4E-16 93.9 4.4 51 201-251 15-68 (92)
23 2ea6_A Ring finger protein 4; 99.2 5.5E-12 1.9E-16 89.7 2.8 45 201-246 17-68 (69)
24 2ecn_A Ring finger protein 141 99.2 6.2E-12 2.1E-16 90.5 3.0 48 201-250 17-64 (70)
25 1chc_A Equine herpes virus-1 r 99.2 5.8E-12 2E-16 90.0 2.8 46 200-246 6-52 (68)
26 1z6u_A NP95-like ring finger p 99.2 1.9E-11 6.6E-16 101.8 6.0 47 201-247 80-126 (150)
27 4ap4_A E3 ubiquitin ligase RNF 99.2 1.1E-11 3.7E-16 97.8 4.1 55 199-254 7-68 (133)
28 1rmd_A RAG1; V(D)J recombinati 99.2 1.3E-11 4.5E-16 97.2 4.5 52 201-252 25-76 (116)
29 2ecm_A Ring finger and CHY zin 99.2 1.1E-11 3.8E-16 84.9 3.5 45 200-245 6-54 (55)
30 2ect_A Ring finger protein 126 99.2 1.3E-11 4.5E-16 90.5 4.0 50 201-251 17-69 (78)
31 2ysj_A Tripartite motif-contai 99.2 1.4E-11 4.9E-16 87.0 3.8 40 201-240 22-63 (63)
32 3hct_A TNF receptor-associated 99.2 1.4E-11 4.9E-16 97.8 3.6 52 201-252 20-71 (118)
33 2y43_A E3 ubiquitin-protein li 99.2 2.2E-11 7.5E-16 93.5 4.5 51 201-252 24-75 (99)
34 2ecj_A Tripartite motif-contai 99.1 2E-11 6.9E-16 84.3 3.7 41 200-240 16-58 (58)
35 2c2l_A CHIP, carboxy terminus 99.1 1.5E-11 5E-16 108.1 3.7 54 201-254 210-263 (281)
36 1iym_A EL5; ring-H2 finger, ub 99.1 2.8E-11 9.6E-16 83.0 4.1 45 200-245 6-54 (55)
37 2kr4_A Ubiquitin conjugation f 99.1 2.1E-11 7.3E-16 92.5 3.6 53 201-254 16-68 (85)
38 2kre_A Ubiquitin conjugation f 99.1 2.8E-11 9.6E-16 94.8 4.3 53 201-254 31-83 (100)
39 2ckl_B Ubiquitin ligase protei 99.1 2.9E-11 1E-15 100.8 4.6 48 201-248 56-104 (165)
40 2ckl_A Polycomb group ring fin 99.1 3E-11 1E-15 94.2 4.2 46 201-247 17-63 (108)
41 3l11_A E3 ubiquitin-protein li 99.1 1.7E-11 5.7E-16 96.5 2.5 46 201-246 17-62 (115)
42 2kiz_A E3 ubiquitin-protein li 99.1 4.7E-11 1.6E-15 85.6 4.0 47 200-247 15-64 (69)
43 1x4j_A Ring finger protein 38; 99.1 3.8E-11 1.3E-15 87.7 3.4 46 200-246 24-72 (75)
44 1wgm_A Ubiquitin conjugation f 99.1 5.4E-11 1.9E-15 92.9 4.4 53 201-254 24-77 (98)
45 2l0b_A E3 ubiquitin-protein li 99.1 6E-11 2E-15 90.4 4.2 46 200-246 41-89 (91)
46 4ap4_A E3 ubiquitin ligase RNF 99.1 4.1E-11 1.4E-15 94.5 3.2 53 200-253 73-132 (133)
47 1v87_A Deltex protein 2; ring- 99.1 5.9E-11 2E-15 92.9 4.1 48 200-247 26-95 (114)
48 2ep4_A Ring finger protein 24; 99.1 5.1E-11 1.8E-15 86.5 3.4 48 200-248 16-66 (74)
49 4ic3_A E3 ubiquitin-protein li 99.0 9.8E-11 3.4E-15 86.3 3.7 42 201-247 26-68 (74)
50 2vje_A E3 ubiquitin-protein li 99.0 9.1E-11 3.1E-15 84.5 3.2 50 201-253 10-62 (64)
51 3knv_A TNF receptor-associated 99.0 7.9E-11 2.7E-15 97.3 3.2 45 201-245 33-77 (141)
52 1jm7_B BARD1, BRCA1-associated 99.0 1E-10 3.5E-15 92.7 3.2 48 201-251 24-72 (117)
53 2vje_B MDM4 protein; proto-onc 99.0 1.3E-10 4.4E-15 83.5 3.1 51 200-253 8-61 (63)
54 2ecl_A Ring-box protein 2; RNF 99.0 2.1E-10 7.2E-15 85.8 3.8 47 201-248 17-78 (81)
55 2f42_A STIP1 homology and U-bo 99.0 2.2E-10 7.6E-15 99.0 4.0 54 201-254 108-161 (179)
56 3hcs_A TNF receptor-associated 99.0 2.1E-10 7.2E-15 95.9 3.8 52 201-252 20-71 (170)
57 2yu4_A E3 SUMO-protein ligase 99.0 2.1E-10 7.1E-15 88.3 3.4 54 201-254 9-71 (94)
58 1e4u_A Transcriptional repress 99.0 3.4E-10 1.1E-14 85.1 4.2 49 201-249 13-65 (78)
59 1bor_A Transcription factor PM 98.9 1.5E-10 5E-15 81.0 1.4 43 201-247 8-50 (56)
60 2ecg_A Baculoviral IAP repeat- 98.9 9.4E-10 3.2E-14 80.9 4.9 42 201-247 27-69 (75)
61 2yho_A E3 ubiquitin-protein li 98.9 8.7E-10 3E-14 82.7 3.7 48 201-255 20-68 (79)
62 2ea5_A Cell growth regulator w 98.9 8.6E-10 2.9E-14 80.6 3.2 49 200-255 16-65 (68)
63 3dpl_R Ring-box protein 1; ubi 98.8 2.7E-09 9.2E-14 84.6 3.9 46 200-246 38-101 (106)
64 2bay_A PRE-mRNA splicing facto 98.7 3.6E-09 1.2E-13 76.1 2.9 53 201-254 5-58 (61)
65 1wim_A KIAA0161 protein; ring 98.6 7E-09 2.4E-13 79.1 1.7 60 201-260 7-80 (94)
66 3t6p_A Baculoviral IAP repeat- 98.6 1.7E-08 5.7E-13 94.9 4.0 42 201-247 297-339 (345)
67 3htk_C E3 SUMO-protein ligase 98.6 1.9E-08 6.4E-13 91.9 3.6 55 201-255 183-241 (267)
68 4a0k_B E3 ubiquitin-protein li 98.6 7E-09 2.4E-13 84.0 0.0 46 200-246 49-112 (117)
69 2d8s_A Cellular modulator of i 98.6 2.9E-08 9.9E-13 75.0 3.3 49 200-248 16-72 (80)
70 3vk6_A E3 ubiquitin-protein li 98.2 9.4E-07 3.2E-11 70.1 3.8 52 201-252 3-55 (101)
71 2ct0_A Non-SMC element 1 homol 98.1 3E-06 1E-10 63.4 5.1 47 200-246 16-64 (74)
72 1vyx_A ORF K3, K3RING; zinc-bi 97.9 6.3E-06 2.1E-10 58.9 3.5 46 200-245 7-58 (60)
73 3k1l_B Fancl; UBC, ring, RWD, 97.6 9.5E-06 3.3E-10 76.9 0.3 46 201-246 310-373 (381)
74 3nw0_A Non-structural maintena 96.3 0.0029 1E-07 56.3 4.2 49 199-247 180-230 (238)
75 3m62_A Ubiquitin conjugation f 95.0 0.021 7.1E-07 60.1 5.4 58 195-254 888-946 (968)
76 2jun_A Midline-1; B-BOX, TRIM, 94.3 0.016 5.5E-07 43.8 1.8 30 201-230 5-38 (101)
77 2ko5_A Ring finger protein Z; 91.4 0.12 4.3E-06 40.5 3.1 46 201-248 30-75 (99)
78 4g9i_A Hydrogenase maturation 87.3 0.73 2.5E-05 47.3 6.0 48 197-244 104-188 (772)
79 2cs3_A Protein C14ORF4, MY039 85.9 0.55 1.9E-05 36.0 3.1 31 201-231 17-51 (93)
80 1weo_A Cellulose synthase, cat 79.6 2.1 7.1E-05 33.2 4.2 47 200-246 17-70 (93)
81 2d8v_A Zinc finger FYVE domain 72.8 1.3 4.6E-05 32.4 1.4 28 201-229 10-38 (67)
82 2lri_C Autoimmune regulator; Z 72.2 3.3 0.00011 29.7 3.4 44 200-243 13-59 (66)
83 1z60_A TFIIH basal transcripti 71.1 2.6 9E-05 29.9 2.6 39 201-240 17-58 (59)
84 2fiy_A Protein FDHE homolog; F 55.3 2.1 7.3E-05 39.3 -0.4 43 200-243 183-231 (309)
85 1z2q_A LM5-1; membrane protein 51.9 1.5 5.1E-05 32.6 -1.7 46 201-246 23-79 (84)
86 2gmg_A Hypothetical protein PF 51.6 5.4 0.00018 31.5 1.4 30 209-244 65-94 (105)
87 3mpx_A FYVE, rhogef and PH dom 50.5 3.3 0.00011 38.2 0.0 45 201-245 377-431 (434)
88 3vth_A Hydrogenase maturation 50.5 1.7 5.8E-05 44.6 -2.1 46 199-244 111-193 (761)
89 2yw8_A RUN and FYVE domain-con 48.2 9.1 0.00031 28.1 2.1 44 201-244 21-73 (82)
90 2lbm_A Transcriptional regulat 43.9 16 0.00054 30.1 3.1 43 200-242 64-116 (142)
91 3u5n_A E3 ubiquitin-protein li 43.7 7.8 0.00027 32.9 1.3 45 200-244 8-55 (207)
92 2l5u_A Chromodomain-helicase-D 42.7 15 0.0005 25.5 2.4 43 201-243 13-58 (61)
93 3o36_A Transcription intermedi 42.0 8.8 0.0003 31.9 1.3 44 201-244 6-52 (184)
94 3ql9_A Transcriptional regulat 41.3 57 0.002 26.3 6.0 42 201-242 59-110 (129)
95 2jmo_A Parkin; IBR, E3 ligase, 40.1 3.6 0.00012 30.2 -1.2 14 216-229 55-68 (80)
96 1wil_A KIAA1045 protein; ring 38.8 24 0.00081 27.0 3.1 30 200-229 16-47 (89)
97 2pv0_B DNA (cytosine-5)-methyl 38.4 39 0.0013 32.1 5.3 61 182-242 70-147 (386)
98 1m3v_A FLIN4, fusion of the LI 36.8 24 0.00082 27.0 3.0 48 201-249 34-84 (122)
99 1vfy_A Phosphatidylinositol-3- 35.2 18 0.0006 25.9 1.9 28 201-228 13-44 (73)
100 1x4u_A Zinc finger, FYVE domai 35.2 17 0.00058 26.6 1.8 29 201-229 16-48 (84)
101 1joc_A EEA1, early endosomal a 35.1 16 0.00056 28.9 1.8 29 201-229 71-103 (125)
102 1wd2_A Ariadne-1 protein homol 34.9 14 0.00048 25.8 1.2 19 229-247 1-19 (60)
103 3i2d_A E3 SUMO-protein ligase 34.4 25 0.00084 33.3 3.2 48 201-249 251-303 (371)
104 2rgt_A Fusion of LIM/homeobox 34.0 47 0.0016 26.7 4.5 44 201-247 35-78 (169)
105 1y02_A CARP2, FYVE-ring finger 32.8 6.8 0.00023 31.3 -0.8 42 201-243 21-66 (120)
106 3c5k_A HD6, histone deacetylas 31.4 15 0.0005 28.8 0.9 23 201-223 26-48 (109)
107 1wfk_A Zinc finger, FYVE domai 31.3 17 0.00058 27.1 1.3 45 201-245 11-65 (88)
108 3hyb_A RBCX protein; rubisco, 31.3 23 0.00079 29.7 2.2 57 88-151 33-91 (155)
109 1mm2_A MI2-beta; PHD, zinc fin 31.0 16 0.00055 25.3 1.0 44 200-243 10-56 (61)
110 3t7l_A Zinc finger FYVE domain 30.6 23 0.0008 26.3 1.9 46 201-246 22-76 (90)
111 2xqn_T Testin, TESS; metal-bin 29.8 43 0.0015 25.4 3.4 43 201-246 32-75 (126)
112 2ro1_A Transcription intermedi 29.6 16 0.00054 30.8 0.9 43 201-243 4-49 (189)
113 1dvp_A HRS, hepatocyte growth 29.4 16 0.00056 31.1 1.0 29 201-229 163-195 (220)
114 2puy_A PHD finger protein 21A; 29.2 10 0.00035 26.0 -0.3 44 201-244 7-53 (60)
115 3zyq_A Hepatocyte growth facto 28.6 19 0.00067 31.0 1.4 45 201-245 166-221 (226)
116 1zbd_B Rabphilin-3A; G protein 27.8 17 0.00058 29.4 0.8 42 201-242 57-106 (134)
117 2k16_A Transcription initiatio 27.8 25 0.00087 24.8 1.7 47 200-246 19-71 (75)
118 4fo9_A E3 SUMO-protein ligase 27.6 41 0.0014 31.6 3.5 48 201-249 217-269 (360)
119 2yql_A PHD finger protein 21A; 27.1 13 0.00044 25.2 -0.1 42 201-242 11-55 (56)
120 2jtn_A LIM domain-binding prot 26.9 44 0.0015 27.2 3.2 44 201-247 89-132 (182)
121 3a1b_A DNA (cytosine-5)-methyl 26.1 63 0.0021 27.1 4.0 60 183-242 57-133 (159)
122 2zet_C Melanophilin; complex, 25.6 28 0.00096 28.7 1.7 42 201-243 70-117 (153)
123 2ysm_A Myeloid/lymphoid or mix 25.5 28 0.00096 26.4 1.6 32 200-231 8-42 (111)
124 2ct7_A Ring finger protein 31; 24.8 8.6 0.00029 28.3 -1.4 14 216-229 48-61 (86)
125 1fp0_A KAP-1 corepressor; PHD 24.4 38 0.0013 25.6 2.1 43 201-243 27-72 (88)
126 2xjy_A Rhombotin-2; oncoprotei 22.8 64 0.0022 24.5 3.2 45 201-246 31-78 (131)
127 1rut_X Flinc4, fusion protein 21.7 43 0.0015 27.5 2.1 45 201-246 34-81 (188)
128 2lcq_A Putative toxin VAPC6; P 21.1 30 0.001 27.9 1.1 28 212-246 133-160 (165)
129 1xwh_A Autoimmune regulator; P 20.7 28 0.00094 24.3 0.6 43 201-243 10-55 (66)
130 1f62_A Transcription factor WS 20.6 54 0.0018 21.3 2.1 42 201-242 2-49 (51)
131 2uzg_A Ubiquitin carboxyl-term 20.3 41 0.0014 25.4 1.6 24 201-224 27-53 (97)
No 1
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=100.00 E-value=5.7e-37 Score=292.50 Aligned_cols=173 Identities=62% Similarity=1.006 Sum_probs=153.8
Q ss_pred CCcccccceeEEeeccchhHHHHHH--HHHHH--------HhhhhhhhhhhcccccccccCCcceeeccCCCchHHHHHh
Q psy9201 71 ESEQHAIGKMVTLVTHLDANNFLTS--LQAQL--------YYVFRLSCTRLGQWAIGYVTADGDILQTIPQNKSLCQALL 140 (264)
Q Consensus 71 ~~~~~~~~~~~l~v~~~~~~a~~ty--v~~~l--------s~~f~~s~~rlgqw~ig~vs~d~~~~qtIp~nksl~qALL 140 (264)
|=....-+|+.+|++|||||||++| |.++| +||||+||||+|||++||+..++.++|+||+++++.++++
T Consensus 204 p~~~l~~~~~~~~~~hpg~~af~ty~ev~~~Lk~~~~~~GsYIfRls~trlGq~~LG~v~~~q~ivqti~~~ksl~~~l~ 283 (389)
T 2y1n_A 204 PWSSLLRNWNSLAVTHPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQALI 283 (389)
T ss_dssp CGGGHHHHHHHHTTSCTTBCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTSCEEEECCCSSCHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCchhhcccHHHHHHHHHHhhccCCceEeccCcchHhHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence 5667788999999999999999999 99999 7899999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHhcCCCCCCCCCCccccccCCCcccccccHHHHHHHHhhCCcccccccccccccCceeeCCCCe
Q psy9201 141 DGYREGLSGLIYSILRSYLYPDGRNVNPELSWEFISTPEDHIKVTQEQYELYCEMGSTFQLCKICAENDKDIRIEPCGHL 220 (264)
Q Consensus 141 dg~Reg~s~i~~~ll~~yl~Pdgr~~npdls~l~~~~~e~~i~vtqEq~e~~~e~~st~elC~ICle~~kdpvitpCGH~ 220 (264)
++.++|. |++|++++.++++.......+++++++++|+.+.+.++.++...|+||++..++++.+||||.
T Consensus 284 d~~~~g~----------yl~p~g~~~~p~l~~l~~~~~~~~i~ls~e~~~~~~e~~~~~~~C~ICle~~~~pv~lpCGH~ 353 (389)
T 2y1n_A 284 DGFREGF----------YLFPDGRNQNPDLTGLCEPTPQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHL 353 (389)
T ss_dssp HHHHTTS----------SCEETTCSCCCCCTTTTC-------CCCHHHHHHHHHTTTSSSBCTTTSSSBCCEEEETTCCE
T ss_pred hhcccCc----------cccCCCCcCCccccccccccccccccccHHHHHHHHhhcCCCCCCCccCcCCCCeEEeCCCCh
Confidence 9999998 899999999999998877777789999999999999988887789999999999999999999
Q ss_pred ecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 221 LCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 221 FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
||..|+.+|+.+...+||+||..+.....+.+.
T Consensus 354 FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i~v~ 386 (389)
T 2y1n_A 354 MCTSCLTSWQESEGQGCPFCRCEIKGTEPIVVD 386 (389)
T ss_dssp ECHHHHHHHHHHTCSBCTTTCCBCCEEEECSCC
T ss_pred hhHHHHHHHHhcCCCCCCCCCCccCCceeEecC
Confidence 999999999985667999999999887655443
No 2
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=100.00 E-value=1.5e-35 Score=274.64 Aligned_cols=92 Identities=61% Similarity=0.963 Sum_probs=88.5
Q ss_pred CCcccccceeEEeeccchhHHHHHH--HHHHH--------HhhhhhhhhhhcccccccccCCcceeeccCCCchHHHHHh
Q psy9201 71 ESEQHAIGKMVTLVTHLDANNFLTS--LQAQL--------YYVFRLSCTRLGQWAIGYVTADGDILQTIPQNKSLCQALL 140 (264)
Q Consensus 71 ~~~~~~~~~~~l~v~~~~~~a~~ty--v~~~l--------s~~f~~s~~rlgqw~ig~vs~d~~~~qtIp~nksl~qALL 140 (264)
|=....-+|+.|||+|||||||+|| |+++| |||||+||||+||||||||++||+|+||||+|||++|||+
T Consensus 228 Pw~~ll~nw~~la~~hpGy~aFlTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~~~~I~qtip~nk~l~qal~ 307 (329)
T 3bux_B 228 PWSSLLRNWNSLAVTHPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQALI 307 (329)
T ss_dssp CGGGHHHHHHHHTTSCTTBCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTSCEEEECCSSCCHHHHHH
T ss_pred chHHHHHHHHHHHhcCcchhheeeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECCCCceeeeCCCCcHHHHHHH
Confidence 5567788999999999999999999 99999 9999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHhcCCCCCCCCCCccc
Q psy9201 141 DGYREGLSGLIYSILRSYLYPDGRNVNPELSW 172 (264)
Q Consensus 141 dg~Reg~s~i~~~ll~~yl~Pdgr~~npdls~ 172 (264)
||.|||+ |+||+|++.|||+++
T Consensus 308 dg~~eg~----------ylyp~g~~~npdl~~ 329 (329)
T 3bux_B 308 DGFREGF----------YLFPDGRNQNPDLTG 329 (329)
T ss_dssp HHHHHTS----------SCEETTCSCCCCCCC
T ss_pred hccccce----------EECCCCCCCCCCcCC
Confidence 9999999 999999999999864
No 3
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=99.98 E-value=2.9e-35 Score=271.49 Aligned_cols=94 Identities=51% Similarity=0.820 Sum_probs=89.4
Q ss_pred CCcccccceeEEeeccchhHHHHHH--HHHHH--------HhhhhhhhhhhcccccccccCCcceeeccCCCchHHHHHh
Q psy9201 71 ESEQHAIGKMVTLVTHLDANNFLTS--LQAQL--------YYVFRLSCTRLGQWAIGYVTADGDILQTIPQNKSLCQALL 140 (264)
Q Consensus 71 ~~~~~~~~~~~l~v~~~~~~a~~ty--v~~~l--------s~~f~~s~~rlgqw~ig~vs~d~~~~qtIp~nksl~qALL 140 (264)
|=....-+|++|||+|||||||+|| |+++| |||||+||||+||||||||++||+|+||||+|||++|||+
T Consensus 213 Pw~~lL~nw~~lav~hpGy~aFlTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s~g~I~qtip~nk~l~qaL~ 292 (323)
T 3op0_A 213 PWPTLLKNWQLLAVNHPGYMAFLTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSSDGSILQTIPANKPLSQVLL 292 (323)
T ss_dssp CGGGHHHHHHHHTTTCTTBCTTCCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECTTSCEEEECCCSSCHHHHHH
T ss_pred cCHHHhhhHHHHhhcCcceeeeeeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcCCCceeecCCCCcHHHHHHH
Confidence 4445688999999999999999999 99999 8999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHhcCCCCCCCCCCccccc
Q psy9201 141 DGYREGLSGLIYSILRSYLYPDGRNVNPELSWEF 174 (264)
Q Consensus 141 dg~Reg~s~i~~~ll~~yl~Pdgr~~npdls~l~ 174 (264)
||.|||+ |+||+|++.|||++.++
T Consensus 293 dG~~eg~----------ylyp~g~~~npdl~~l~ 316 (323)
T 3op0_A 293 EGQKDGF----------YLYPDGKTHNPDLTELG 316 (323)
T ss_dssp HHHHTTS----------SCEETTCSCCCCCHHHH
T ss_pred hccccce----------eECCCCCcCCcCHHHHh
Confidence 9999999 99999999999998764
No 4
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.35 E-value=6.6e-13 Score=97.52 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=48.7
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.+.+|+.++|||.||..|+.+|+..+..+||.||..+...++.|-..
T Consensus 10 ~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n~~ 63 (78)
T 1t1h_A 10 RCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 63 (78)
T ss_dssp SCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTT
T ss_pred CCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccCHH
Confidence 699999999999999999999999999999865779999999998877776554
No 5
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=4.6e-13 Score=95.79 Aligned_cols=49 Identities=18% Similarity=0.320 Sum_probs=44.5
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKE 249 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~v 249 (264)
.|+||++.+++|+.++|||.||..|+.+|+......||.||..+..+++
T Consensus 17 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 17 KCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKV 65 (66)
T ss_dssp ECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTTC
T ss_pred CCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhhc
Confidence 6999999999999999999999999999996556789999999887654
No 6
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.34 E-value=4.1e-13 Score=94.22 Aligned_cols=52 Identities=21% Similarity=0.461 Sum_probs=47.3
Q ss_pred ccccccccccCc-------eeeCCCCeecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 201 LCKICAENDKDI-------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 201 lC~ICle~~kdp-------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
.|+||++.+.++ +.++|||.||..|+.+|+.. ..+||.||..+...++.++|
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 5 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp BCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-CSBCTTTCCBCTTTCEEECC
T ss_pred CCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-CCCCCCCCccCCccceeeee
Confidence 699999998876 89999999999999999976 46899999999999998886
No 7
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.34 E-value=3.7e-13 Score=96.69 Aligned_cols=52 Identities=21% Similarity=0.463 Sum_probs=47.2
Q ss_pred ccccccccccCc-------eeeCCCCeecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 201 LCKICAENDKDI-------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 201 lC~ICle~~kdp-------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
.|+||++.+.++ +.++|||.||..|+.+|+... .+||.||..+...++.++|
T Consensus 12 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~~~~ 70 (71)
T 3ng2_A 12 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA-NTCPTCRKKINHKRYHPIY 70 (71)
T ss_dssp BCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC-SBCTTTCCBCCCCSCCCCC
T ss_pred CCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC-CCCCCCCCccChhheeecc
Confidence 699999998887 899999999999999999754 5899999999998888876
No 8
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.4e-12 Score=94.29 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=43.6
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc--CCCcccccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS--NRSRILFYLFYFFSVKE 249 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s--~~~~CP~CR~~i~~~~v 249 (264)
.|+||++.+.+++.++|||.||..|+.+|+.. ....||.||..+...++
T Consensus 22 ~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 72 (73)
T 2ysl_A 22 ICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAI 72 (73)
T ss_dssp BCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCC
T ss_pred EeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccC
Confidence 69999999999999999999999999999962 45689999999877653
No 9
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.30 E-value=1.5e-12 Score=100.98 Aligned_cols=55 Identities=22% Similarity=0.432 Sum_probs=48.9
Q ss_pred ccccccccccCcee-eCCCCeecHhhHHHHhccCCCcccccccccccccceeccch
Q psy9201 201 LCKICAENDKDIRI-EPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWTP 255 (264)
Q Consensus 201 lC~ICle~~kdpvi-tpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~~ 255 (264)
.|+||++.+.+|+. ++|||.||..|+.+|+......||.||..+...++++....
T Consensus 24 ~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~~~~ 79 (100)
T 3lrq_A 24 RCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWA 79 (100)
T ss_dssp BCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECTTH
T ss_pred CCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhhHHH
Confidence 69999999999999 99999999999999998665689999999988877766543
No 10
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.29 E-value=1.4e-12 Score=93.00 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=46.3
Q ss_pred ccccccc-cccCc----eeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAE-NDKDI----RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle-~~kdp----vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||++ .+.++ ++++|||.||..|+.+|+..+...||.||+.+...++.+...
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~ 63 (65)
T 1g25_A 5 GCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLF 63 (65)
T ss_dssp CCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCEEECC
T ss_pred cCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccceeecc
Confidence 5999999 77777 578999999999999997666678999999999888776543
No 11
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2e-12 Score=94.08 Aligned_cols=52 Identities=19% Similarity=0.296 Sum_probs=45.7
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
.|+||++.+.+++.+ +|||.||..|+.+|+.. ...||.||..+...+.++..
T Consensus 17 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~ 69 (72)
T 2djb_A 17 LCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQPLSGP 69 (72)
T ss_dssp SCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH-CSSCTTTCCCCCSSCSCCCC
T ss_pred CCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc-CCcCCCcCcccCcccccccC
Confidence 699999999999887 99999999999999975 46899999999887766543
No 12
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.27 E-value=1.2e-12 Score=95.77 Aligned_cols=53 Identities=23% Similarity=0.290 Sum_probs=45.9
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccC------CCcccccccccccccceecc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSN------RSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~------~~~CP~CR~~i~~~~vipl~ 253 (264)
.|+||++.+.+|+.++|||.||..|+.+|+... ...||.||..+...++.+-+
T Consensus 14 ~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~ 72 (79)
T 2egp_A 14 TCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQ 72 (79)
T ss_dssp EETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTCS
T ss_pred CCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcCH
Confidence 699999999999999999999999999998752 56899999999876655443
No 13
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=1.9e-12 Score=93.96 Aligned_cols=49 Identities=18% Similarity=0.229 Sum_probs=43.8
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccce
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEI 250 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vi 250 (264)
.|+||++.+.+++.++|||.||..|+.+|+... ..||+||..+...++.
T Consensus 17 ~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~ 65 (71)
T 2d8t_A 17 ECAICLQTCVHPVSLPCKHVFCYLCVKGASWLG-KRCALCRQEIPEDFLD 65 (71)
T ss_dssp BCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCS-SBCSSSCCBCCHHHHS
T ss_pred CCccCCcccCCCEEccCCCHHHHHHHHHHHHCC-CcCcCcCchhCHhhcc
Confidence 699999999999999999999999999999754 6899999998876543
No 14
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=2.8e-12 Score=95.41 Aligned_cols=51 Identities=25% Similarity=0.438 Sum_probs=44.3
Q ss_pred ccccccccccC----ceeeCCCCeecHhhHHHHhccC--CCccccccccccccccee
Q psy9201 201 LCKICAENDKD----IRIEPCGHLLCTPCLTSWQVSN--RSRILFYLFYFFSVKEIP 251 (264)
Q Consensus 201 lC~ICle~~kd----pvitpCGH~FC~~CI~~wl~s~--~~~CP~CR~~i~~~~vip 251 (264)
.|+||++.+.+ ++.++|||.||..|+.+|+... ...||.||..+...++..
T Consensus 17 ~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~ 73 (88)
T 2ct2_A 17 ECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQ 73 (88)
T ss_dssp BCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTT
T ss_pred CCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHH
Confidence 69999999998 9999999999999999999754 468999999987765433
No 15
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.25 E-value=4.1e-12 Score=93.39 Aligned_cols=54 Identities=24% Similarity=0.318 Sum_probs=47.2
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccC-----CCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSN-----RSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~-----~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||++.+.+++.++|||.||..|+.+|+... ...||.||..+...++.+...
T Consensus 21 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~ 79 (85)
T 2ecw_A 21 TCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPNLH 79 (85)
T ss_dssp SCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEECSC
T ss_pred CCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcCHH
Confidence 699999999999999999999999999998752 568999999998877666543
No 16
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.24 E-value=3.8e-12 Score=93.33 Aligned_cols=47 Identities=23% Similarity=0.433 Sum_probs=41.4
Q ss_pred ccccccccccCceeeC-CCCeecHhhHHHHhccC-CCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEP-CGHLLCTPCLTSWQVSN-RSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitp-CGH~FC~~CI~~wl~s~-~~~CP~CR~~i~~~ 247 (264)
.|+||++.+.+|+.++ |||.||..|+.+|+... ...||.||..+...
T Consensus 17 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~ 65 (74)
T 2yur_A 17 LCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSP 65 (74)
T ss_dssp SCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCT
T ss_pred CCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCc
Confidence 6999999999999999 99999999999999743 36899999975543
No 17
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.23 E-value=4.2e-12 Score=103.54 Aligned_cols=46 Identities=22% Similarity=0.421 Sum_probs=41.9
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++.+.+|+.++|||.||..|+.+|+.. ..+||.||.++...
T Consensus 55 ~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 55 QCIICSEYFIEAVTLNCAHSFCSYCINEWMKR-KIECPICRKDIKSK 100 (138)
T ss_dssp BCTTTCSBCSSEEEETTSCEEEHHHHHHHTTT-CSBCTTTCCBCCCE
T ss_pred CCcccCcccCCceECCCCCCccHHHHHHHHHc-CCcCCCCCCcCCCC
Confidence 59999999999999999999999999999974 56899999998654
No 18
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=4.5e-12 Score=93.17 Aligned_cols=54 Identities=24% Similarity=0.357 Sum_probs=46.9
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc-----CCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS-----NRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s-----~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||++.+.+++.++|||.||..|+.+|+.. ....||.||..+...++.+-+.
T Consensus 21 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~ 79 (85)
T 2ecv_A 21 TCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRH 79 (85)
T ss_dssp CCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCSCC
T ss_pred CCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCccHH
Confidence 69999999999999999999999999999864 2568999999998876665544
No 19
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.22 E-value=5.8e-12 Score=100.53 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=42.8
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
.|+||++.+.+|+.++|||.||..|+..|+..+...||.||..+..
T Consensus 54 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 54 QCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp BCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 6999999999999999999999999999998666699999999976
No 20
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.21 E-value=7.1e-12 Score=97.34 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=46.9
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccC--CCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSN--RSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~--~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||++.+.+|+.++|||.||..|+.+|+... ...||.||..+...++.+...
T Consensus 23 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~~~ 78 (112)
T 1jm7_A 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTR 78 (112)
T ss_dssp SCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCS
T ss_pred CCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCccHH
Confidence 699999999999999999999999999999743 258999999998877666544
No 21
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=7.7e-12 Score=92.73 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=41.0
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFF 245 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~ 245 (264)
.|+||++.+.+|++++|||.||..|+.+|+.. ...||.||..+.
T Consensus 17 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~ 60 (81)
T 2csy_A 17 RCFICRQAFQNPVVTKCRHYFCESCALEHFRA-TPRCYICDQPTG 60 (81)
T ss_dssp BCSSSCSBCCSEEECTTSCEEEHHHHHHHHHH-CSBCSSSCCBCC
T ss_pred CCcCCCchhcCeeEccCCCHhHHHHHHHHHHC-CCcCCCcCcccc
Confidence 69999999999999999999999999999975 568999999986
No 22
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.20 E-value=9.9e-12 Score=93.87 Aligned_cols=51 Identities=22% Similarity=0.396 Sum_probs=42.9
Q ss_pred ccccccccccCceeeC-CCCeecHhhHHHHhcc-CCCcccccccccc-ccccee
Q psy9201 201 LCKICAENDKDIRIEP-CGHLLCTPCLTSWQVS-NRSRILFYLFYFF-SVKEIP 251 (264)
Q Consensus 201 lC~ICle~~kdpvitp-CGH~FC~~CI~~wl~s-~~~~CP~CR~~i~-~~~vip 251 (264)
.|+||++.+.+|+.++ |||.||..|+.+|+.. +...||.||..+. ..+..+
T Consensus 15 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~ 68 (92)
T 3ztg_A 15 LCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIA 68 (92)
T ss_dssp EETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEE
T ss_pred CCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCc
Confidence 6999999999999999 9999999999999864 3468999999973 434433
No 23
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=5.5e-12 Score=89.67 Aligned_cols=45 Identities=22% Similarity=0.454 Sum_probs=40.3
Q ss_pred ccccccccccCc-------eeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 201 LCKICAENDKDI-------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kdp-------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
.|+||++.+.++ +.++|||.||..|+.+|+.. ..+||+||..+..
T Consensus 17 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 17 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINH 68 (69)
T ss_dssp CCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-CSSCTTTCCCCCC
T ss_pred CCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-CCCCCCCCCccCc
Confidence 699999998877 89999999999999999975 4689999998764
No 24
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=6.2e-12 Score=90.49 Aligned_cols=48 Identities=25% Similarity=0.610 Sum_probs=42.8
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccce
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEI 250 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vi 250 (264)
.|+||++.+.+ +.++|||.||..|+.+|+. ...+||.||..+...+..
T Consensus 17 ~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~~~~~~ 64 (70)
T 2ecn_A 17 ECCICMDGRAD-LILPCAHSFCQKCIDKWSD-RHRNCPICRLQMTGANES 64 (70)
T ss_dssp CCSSSCCSCCS-EEETTTEEECHHHHHHSSC-CCSSCHHHHHCTTCCCCC
T ss_pred CCeeCCcCccC-cccCCCCcccHHHHHHHHH-CcCcCCCcCCcccCCCcc
Confidence 69999999999 9999999999999999997 456899999999876543
No 25
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.19 E-value=5.8e-12 Score=89.99 Aligned_cols=46 Identities=28% Similarity=0.565 Sum_probs=40.8
Q ss_pred cccccccccccCc-eeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 200 QLCKICAENDKDI-RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kdp-vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
..|+||++.+.++ +.++|||.||..|+.+|+..+ .+||.||..+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~-~~CP~Cr~~~~~ 52 (68)
T 1chc_A 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQN-PTCPLCKVPVES 52 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHS-CSTTTTCCCCCC
T ss_pred CCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCc-CcCcCCChhhHh
Confidence 4699999999985 889999999999999999754 689999998864
No 26
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.18 E-value=1.9e-11 Score=101.80 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=43.6
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++.+.+|+.++|||.||..|+.+|+......||.||..+...
T Consensus 80 ~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 80 MCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp BCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred EeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 69999999999999999999999999999986656899999998876
No 27
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.18 E-value=1.1e-11 Score=97.84 Aligned_cols=55 Identities=20% Similarity=0.412 Sum_probs=48.4
Q ss_pred ccccccccccccCc-------eeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 199 FQLCKICAENDKDI-------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 199 ~elC~ICle~~kdp-------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
...|+||++.+.++ +.++|||.||..|+.+|+..+ .+||.||+.+...++.+++.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~l~~l~i 68 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA-NTCPTCRKKINHKRYHPIYI 68 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC-SBCTTTCCBCTTTCEEECBC
T ss_pred CCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC-CCCCCCCCcCcccccccccc
Confidence 34699999999988 999999999999999999754 58999999999888877664
No 28
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.18 E-value=1.3e-11 Score=97.25 Aligned_cols=52 Identities=21% Similarity=0.296 Sum_probs=46.5
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceec
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPL 252 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl 252 (264)
.|+||++.+.+|+.++|||.||..|+.+|+......||.||..+...++.+.
T Consensus 25 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 76 (116)
T 1rmd_A 25 SCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESP 76 (116)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCC
T ss_pred CCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhcccc
Confidence 6999999999999999999999999999998656789999999988765543
No 29
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.18 E-value=1.1e-11 Score=84.89 Aligned_cols=45 Identities=27% Similarity=0.407 Sum_probs=39.6
Q ss_pred cccccccccccC----ceeeCCCCeecHhhHHHHhccCCCcccccccccc
Q psy9201 200 QLCKICAENDKD----IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFF 245 (264)
Q Consensus 200 elC~ICle~~kd----pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~ 245 (264)
..|+||++.+.+ ++.++|||.||..|+.+|+... .+||+||..+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~ 54 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-YRCPLCSGPSS 54 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT-CCCTTSCCSSC
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC-CcCCCCCCcCC
Confidence 369999998865 8899999999999999999865 68999998764
No 30
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.17 E-value=1.3e-11 Score=90.53 Aligned_cols=50 Identities=20% Similarity=0.412 Sum_probs=42.1
Q ss_pred ccccccccccCc---eeeCCCCeecHhhHHHHhccCCCccccccccccccccee
Q psy9201 201 LCKICAENDKDI---RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIP 251 (264)
Q Consensus 201 lC~ICle~~kdp---vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vip 251 (264)
.|+||++.+.++ +.++|||.||..|+.+|+... .+||+||..+...++.+
T Consensus 17 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~~ 69 (78)
T 2ect_A 17 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH-DSCPVCRKSLTGQNTAT 69 (78)
T ss_dssp CCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT-CSCTTTCCCCCCSCSCC
T ss_pred CCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC-CcCcCcCCccCCcccCC
Confidence 699999987654 567999999999999999754 68999999998776544
No 31
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=1.4e-11 Score=87.03 Aligned_cols=40 Identities=23% Similarity=0.492 Sum_probs=36.7
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc--CCCccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS--NRSRILFY 240 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s--~~~~CP~C 240 (264)
.|+||++.+.+|+.++|||.||..|+.+|+.. ....||.|
T Consensus 22 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 22 ICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp BCTTTCSBCSSCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CCCcCCchhCCeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 69999999999999999999999999999973 45689998
No 32
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.15 E-value=1.4e-11 Score=97.76 Aligned_cols=52 Identities=19% Similarity=0.386 Sum_probs=46.4
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceec
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPL 252 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl 252 (264)
.|+||++.+.+|+.++|||.||..|+.+|+.....+||.||..+...++.+.
T Consensus 20 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 71 (118)
T 3hct_A 20 ECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 71 (118)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEEC
T ss_pred CCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccC
Confidence 6999999999999999999999999999998655589999999988766553
No 33
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.15 E-value=2.2e-11 Score=93.46 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=44.6
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhccCCCcccccccccccccceec
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPL 252 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl 252 (264)
.|+||++.+.+|+.+ +|||.||..|+.+|+.. ...||.||..+...++.+-
T Consensus 24 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~l~~n 75 (99)
T 2y43_A 24 RCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLKNN 75 (99)
T ss_dssp BCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCCGGGCEEC
T ss_pred CcccCChhhCCcCEECCCCCHhhHHHHHHHHHC-CCCCCCCCCcCChhhCCcC
Confidence 699999999999988 89999999999999974 4689999999987655543
No 34
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=2e-11 Score=84.28 Aligned_cols=41 Identities=29% Similarity=0.628 Sum_probs=36.9
Q ss_pred cccccccccccCceeeCCCCeecHhhHHHHhcc--CCCccccc
Q psy9201 200 QLCKICAENDKDIRIEPCGHLLCTPCLTSWQVS--NRSRILFY 240 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH~FC~~CI~~wl~s--~~~~CP~C 240 (264)
..|+||++.+++++.++|||.||..|+.+|+.. ....||.|
T Consensus 16 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 16 ASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred CCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 369999999999999999999999999999653 55789998
No 35
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.15 E-value=1.5e-11 Score=108.11 Aligned_cols=54 Identities=15% Similarity=-0.061 Sum_probs=48.1
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.++|||+++|||.||..||.+|+..+..+||+||.++...+.+|-..
T Consensus 210 ~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~ 263 (281)
T 2c2l_A 210 CGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLA 263 (281)
T ss_dssp BCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHH
T ss_pred CCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHH
Confidence 699999999999999999999999999999865556999999998877777544
No 36
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.14 E-value=2.8e-11 Score=83.01 Aligned_cols=45 Identities=27% Similarity=0.559 Sum_probs=38.7
Q ss_pred cccccccccccC---ceeeC-CCCeecHhhHHHHhccCCCcccccccccc
Q psy9201 200 QLCKICAENDKD---IRIEP-CGHLLCTPCLTSWQVSNRSRILFYLFYFF 245 (264)
Q Consensus 200 elC~ICle~~kd---pvitp-CGH~FC~~CI~~wl~s~~~~CP~CR~~i~ 245 (264)
..|+||++.+.+ ++.++ |||.||..|+.+|+.. ..+||.||+++.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~-~~~CP~Cr~~~~ 54 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS-HSTCPLCRLTVV 54 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT-CCSCSSSCCCSC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc-CCcCcCCCCEeE
Confidence 369999998877 77777 9999999999999975 568999998763
No 37
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.13 E-value=2.1e-11 Score=92.47 Aligned_cols=53 Identities=9% Similarity=-0.051 Sum_probs=48.1
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.++|||+++|||.||..||.+|+.. ..+||+||.++...+++|-..
T Consensus 16 ~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~~l~pn~~ 68 (85)
T 2kr4_A 16 RDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-SPTDPFNRQMLTESMLEPVPE 68 (85)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCCGGGCEECHH
T ss_pred ECcccCchhcCCeECCCCCEECHHHHHHHHhc-CCCCCCCcCCCChHhcchHHH
Confidence 69999999999999999999999999999985 468999999998888777655
No 38
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.13 E-value=2.8e-11 Score=94.82 Aligned_cols=53 Identities=9% Similarity=-0.055 Sum_probs=48.3
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.++|||+++|||.||..||.+|+.. ..+||+||.++...+++|-..
T Consensus 31 ~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~~L~pn~~ 83 (100)
T 2kre_A 31 RDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-SPTDPFNRQTLTESMLEPVPE 83 (100)
T ss_dssp BCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-CSBCSSSCCBCCTTSSEECHH
T ss_pred CCcCccCcccCCeECCCCCEEchHHHHHHHHc-CCCCCCCCCCCChhhceECHH
Confidence 69999999999999999999999999999974 579999999999888877655
No 39
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.13 E-value=2.9e-11 Score=100.84 Aligned_cols=48 Identities=21% Similarity=0.374 Sum_probs=43.1
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhccCCCccccccccccccc
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVK 248 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~ 248 (264)
.|+||++.+.+|+.+ +|||.||..|+.+|+..+...||.||..+...+
T Consensus 56 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 104 (165)
T 2ckl_B 56 MCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKR 104 (165)
T ss_dssp BCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGG
T ss_pred CCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcc
Confidence 699999999999988 999999999999999875678999999986533
No 40
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.12 E-value=3e-11 Score=94.21 Aligned_cols=46 Identities=15% Similarity=0.365 Sum_probs=42.2
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++.+.+|+.+ +|||.||..|+.+|+... ..||.||..+...
T Consensus 17 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 17 MCVLCGGYFIDATTIIECLHSFCKTCIVRYLETS-KYCPICDVQVHKT 63 (108)
T ss_dssp BCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSC-SBCTTTCCBSCSS
T ss_pred CCccCChHHhCcCEeCCCCChhhHHHHHHHHHhC-CcCcCCCcccccc
Confidence 699999999999998 999999999999999754 6899999998765
No 41
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.12 E-value=1.7e-11 Score=96.50 Aligned_cols=46 Identities=30% Similarity=0.438 Sum_probs=42.5
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
.|+||++.+.+|+.++|||.||..|+.+|+..+...||.||..+..
T Consensus 17 ~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 17 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp BCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 5999999999999999999999999999998666799999998864
No 42
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.10 E-value=4.7e-11 Score=85.61 Aligned_cols=47 Identities=26% Similarity=0.555 Sum_probs=39.7
Q ss_pred ccccccccccc---CceeeCCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 200 QLCKICAENDK---DIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 200 elC~ICle~~k---dpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
..|+||++.+. .++.++|||.||..|+.+|+..+ .+||+||..+...
T Consensus 15 ~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 15 EKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN-KKCPICRVDIEAQ 64 (69)
T ss_dssp CSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC-SBCTTTCSBSCSC
T ss_pred CCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC-CCCcCcCccccCc
Confidence 36999998764 57889999999999999999764 5799999988653
No 43
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=3.8e-11 Score=87.73 Aligned_cols=46 Identities=22% Similarity=0.444 Sum_probs=40.0
Q ss_pred cccccccccccCc---eeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 200 QLCKICAENDKDI---RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kdp---vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
..|+||++.+.++ +.++|||.||..|+.+|+..+ .+||+||..+..
T Consensus 24 ~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~-~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 24 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN-RTCPICRADSGP 72 (75)
T ss_dssp CEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHC-SSCTTTCCCCCC
T ss_pred CCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcC-CcCcCcCCcCCC
Confidence 3699999988765 789999999999999999754 589999998765
No 44
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.09 E-value=5.4e-11 Score=92.86 Aligned_cols=53 Identities=13% Similarity=-0.074 Sum_probs=48.3
Q ss_pred ccccccccccCceeeCCC-CeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCG-HLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCG-H~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.++|||+++|| |.||..||.+|+.. ..+||+||.++...+++|...
T Consensus 24 ~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-~~~cP~~~~~l~~~~L~pn~~ 77 (98)
T 1wgm_A 24 LDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLTMDQIRPNTE 77 (98)
T ss_dssp BCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCCTTTSEECHH
T ss_pred CCcCccccccCCeECCCCCeEECHHHHHHHHHh-CCCCCCCCCCCChhhceEcHH
Confidence 699999999999999999 99999999999975 568999999999888877655
No 45
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.08 E-value=6e-11 Score=90.41 Aligned_cols=46 Identities=22% Similarity=0.493 Sum_probs=40.1
Q ss_pred cccccccccccC---ceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 200 QLCKICAENDKD---IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kd---pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
..|+||++.+.+ ++.++|||.||..|+.+|+.. ..+||+||..+..
T Consensus 41 ~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~-~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 41 MCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK-SGTCPVCRCMFPP 89 (91)
T ss_dssp SEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT-TCBCTTTCCBSSC
T ss_pred CCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc-CCcCcCcCccCCC
Confidence 369999998876 788999999999999999975 4589999998764
No 46
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.08 E-value=4.1e-11 Score=94.53 Aligned_cols=53 Identities=21% Similarity=0.445 Sum_probs=47.8
Q ss_pred cccccccccccCc-------eeeCCCCeecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 200 QLCKICAENDKDI-------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 200 elC~ICle~~kdp-------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
..|+||++.+.++ +.++|||.||..|+.+|+... .+||.||..+..++++|+|
T Consensus 73 ~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~~~~ 132 (133)
T 4ap4_A 73 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA-NTCPTCRKKINHKRYHPIY 132 (133)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC-SBCTTTCCBCCGGGEEEEC
T ss_pred CCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC-CCCCCCCCcCChhcceeee
Confidence 3699999988876 899999999999999999754 5899999999999999886
No 47
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.08 E-value=5.9e-11 Score=92.87 Aligned_cols=48 Identities=17% Similarity=0.233 Sum_probs=39.8
Q ss_pred cccccccccccCce------------------eeCCCCeecHhhHHHHhc----cCCCcccccccccccc
Q psy9201 200 QLCKICAENDKDIR------------------IEPCGHLLCTPCLTSWQV----SNRSRILFYLFYFFSV 247 (264)
Q Consensus 200 elC~ICle~~kdpv------------------itpCGH~FC~~CI~~wl~----s~~~~CP~CR~~i~~~ 247 (264)
+.|+||++.+.++. +++|||.||..||.+|+. ....+||+||..+...
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 36999999986643 789999999999999995 2356999999988654
No 48
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=5.1e-11 Score=86.50 Aligned_cols=48 Identities=25% Similarity=0.519 Sum_probs=39.8
Q ss_pred cccccccccccCc---eeeCCCCeecHhhHHHHhccCCCccccccccccccc
Q psy9201 200 QLCKICAENDKDI---RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVK 248 (264)
Q Consensus 200 elC~ICle~~kdp---vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~ 248 (264)
..|+||++.+.++ +.++|||.||..|+.+|+..+ .+||+||..+....
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~-~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR-KVCPLCNMPVLQLA 66 (74)
T ss_dssp CBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC-SBCTTTCCBCSSCC
T ss_pred CCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC-CcCCCcCccccccc
Confidence 3699999998764 345999999999999999864 48999999987643
No 49
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.04 E-value=9.8e-11 Score=86.27 Aligned_cols=42 Identities=31% Similarity=0.665 Sum_probs=38.8
Q ss_pred ccccccccccCceeeCCCCe-ecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++...+++.+||||. ||..|+..| ..||+||..+...
T Consensus 26 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~~ 68 (74)
T 4ic3_A 26 LCKICMDRNIAIVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITFK 68 (74)
T ss_dssp BCTTTSSSBCCEEEETTCCBCCCHHHHTTC-----SBCTTTCCBCSEE
T ss_pred CCCCCCCCCCCEEEcCCCChhHHHHhhhcC-----ccCCCcCcCccCc
Confidence 69999999999999999999 999999888 5899999998764
No 50
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.03 E-value=9.1e-11 Score=84.53 Aligned_cols=50 Identities=20% Similarity=0.276 Sum_probs=43.0
Q ss_pred ccccccccccCceee--CCCCe-ecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 201 LCKICAENDKDIRIE--PCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 201 lC~ICle~~kdpvit--pCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
.|.||++..++++.+ ||||. +|..|+.+|... ...||+||.++.. ++++|
T Consensus 10 ~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CPiCR~~i~~--~i~i~ 62 (64)
T 2vje_A 10 PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKR-NKPCPVCRQPIQM--IVLTY 62 (64)
T ss_dssp CCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHT-TCCCTTTCCCCCE--EEEEE
T ss_pred CCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHc-CCcCCCcCcchhc--eEeee
Confidence 699999999999988 99999 899999999864 4589999999864 45554
No 51
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.03 E-value=7.9e-11 Score=97.28 Aligned_cols=45 Identities=24% Similarity=0.385 Sum_probs=41.5
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFF 245 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~ 245 (264)
.|+||.+.+.+|+.++|||.||..|+.+|+.....+||.||.++.
T Consensus 33 ~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 33 LCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGI 77 (141)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTC
T ss_pred CCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCccc
Confidence 699999999999999999999999999999866669999999764
No 52
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.02 E-value=1e-10 Score=92.70 Aligned_cols=48 Identities=13% Similarity=0.235 Sum_probs=42.6
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhccCCCccccccccccccccee
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIP 251 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vip 251 (264)
.|+||++.+.+|+.+ +|||.||..|+.+|+. ..||.||..+...++.+
T Consensus 24 ~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~~~~~~~ 72 (117)
T 1jm7_B 24 RCSRCTNILREPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAWIQDLKI 72 (117)
T ss_dssp SCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCSCSSCCC
T ss_pred CCCCCChHhhCccEeCCCCCHHHHHHHHHHhc---CCCcCCCCcCccccccc
Confidence 699999999999999 9999999999999986 68999999987655443
No 53
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.01 E-value=1.3e-10 Score=83.50 Aligned_cols=51 Identities=20% Similarity=0.368 Sum_probs=43.0
Q ss_pred cccccccccccCceee--CCCCe-ecHhhHHHHhccCCCcccccccccccccceecc
Q psy9201 200 QLCKICAENDKDIRIE--PCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLW 253 (264)
Q Consensus 200 elC~ICle~~kdpvit--pCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~ 253 (264)
..|.||++..++++++ ||||. +|..|+.+|...+ ..||+||.++.. ++.+|
T Consensus 8 ~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~CPiCR~~i~~--~i~i~ 61 (63)
T 2vje_B 8 KPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAG-ASCPICKKEIQL--VIKVF 61 (63)
T ss_dssp SBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTT-CBCTTTCCBCCE--EEEEE
T ss_pred CCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhC-CcCCCcCchhhc--eEEEe
Confidence 3699999999999888 99998 9999999988644 689999999864 45444
No 54
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=2.1e-10 Score=85.84 Aligned_cols=47 Identities=21% Similarity=0.473 Sum_probs=36.3
Q ss_pred ccccccccccC--------------ceee-CCCCeecHhhHHHHhccCCCccccccccccccc
Q psy9201 201 LCKICAENDKD--------------IRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVK 248 (264)
Q Consensus 201 lC~ICle~~kd--------------pvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~ 248 (264)
.|+||++.+.+ ++.+ +|||.||..||.+|+..+ .+||+||.++...+
T Consensus 17 ~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~-~~CP~CR~~~~~~~ 78 (81)
T 2ecl_A 17 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN-NRCPLCQQDWVVQR 78 (81)
T ss_dssp CBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC-CBCTTTCCBCCEEE
T ss_pred CCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC-CCCCCcCCCcchhh
Confidence 47777776644 4444 599999999999999854 58999999876543
No 55
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.98 E-value=2.2e-10 Score=98.98 Aligned_cols=54 Identities=15% Similarity=-0.073 Sum_probs=48.6
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.++|||+++|||.||..||..|+.....+||+||.++...+.+|-..
T Consensus 108 ~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN~~ 161 (179)
T 2f42_A 108 CGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLA 161 (179)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECHH
T ss_pred cccCccccCCCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcchHH
Confidence 699999999999999999999999999999764457999999998888887655
No 56
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.98 E-value=2.1e-10 Score=95.89 Aligned_cols=52 Identities=19% Similarity=0.386 Sum_probs=46.5
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccccceec
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPL 252 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl 252 (264)
.|+||.+.+.+|+.++|||.||..|+.+|+.....+||.||..+...++.+.
T Consensus 20 ~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 71 (170)
T 3hcs_A 20 ECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 71 (170)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEEC
T ss_pred CCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhh
Confidence 6999999999999999999999999999997655689999999988766553
No 57
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=2.1e-10 Score=88.25 Aligned_cols=54 Identities=17% Similarity=0.085 Sum_probs=46.1
Q ss_pred ccccccccccCceeeC-CCCeecHhhHHHHhccC-----CCcccc--cccc-cccccceeccc
Q psy9201 201 LCKICAENDKDIRIEP-CGHLLCTPCLTSWQVSN-----RSRILF--YLFY-FFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvitp-CGH~FC~~CI~~wl~s~-----~~~CP~--CR~~-i~~~~vipl~~ 254 (264)
.|+||.+.++|||+++ |||.||..||.+|+... ..+||+ |+.. +...+++|-..
T Consensus 9 ~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~ 71 (94)
T 2yu4_A 9 TCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEA 71 (94)
T ss_dssp BCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHH
T ss_pred ECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHH
Confidence 6999999999999996 99999999999999743 458999 9877 77777776554
No 58
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.97 E-value=3.4e-10 Score=85.12 Aligned_cols=49 Identities=20% Similarity=0.357 Sum_probs=40.8
Q ss_pred ccccccccc--cCceeeC--CCCeecHhhHHHHhccCCCcccccccccccccc
Q psy9201 201 LCKICAEND--KDIRIEP--CGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKE 249 (264)
Q Consensus 201 lC~ICle~~--kdpvitp--CGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~v 249 (264)
.|+||++.. .+++..| |||.||..|+.++.......||.||+.+....+
T Consensus 13 ~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~ 65 (78)
T 1e4u_A 13 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65 (78)
T ss_dssp BCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSS
T ss_pred cCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCch
Confidence 699999977 4566666 999999999999876556789999999987554
No 59
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.95 E-value=1.5e-10 Score=81.02 Aligned_cols=43 Identities=23% Similarity=0.408 Sum_probs=38.0
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++.+.+|+.++|||.||..|+.+| ...||.||..+...
T Consensus 8 ~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~----~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 8 RCQQCQAEAKCPKLLPCLHTLCSGCLEAS----GMQCPICQAPWPLG 50 (56)
T ss_dssp SCSSSCSSCBCCSCSTTSCCSBTTTCSSS----SSSCSSCCSSSSCC
T ss_pred CceEeCCccCCeEEcCCCCcccHHHHccC----CCCCCcCCcEeecC
Confidence 69999999999999999999999998773 45899999987643
No 60
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=9.4e-10 Score=80.93 Aligned_cols=42 Identities=31% Similarity=0.670 Sum_probs=37.6
Q ss_pred ccccccccccCceeeCCCCe-ecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++.+++++.+||||. ||..|+.. ...||+||..+...
T Consensus 27 ~C~IC~~~~~~~~~~pCgH~~~C~~C~~~-----~~~CP~Cr~~i~~~ 69 (75)
T 2ecg_A 27 LCKICMDRNIAIVFVPCGHLVTCKQCAEA-----VDKCPMCYTVITFK 69 (75)
T ss_dssp SCSSSCSSCCCBCCSSSCCCCBCHHHHHH-----CSBCTTTCCBCCCC
T ss_pred CCCcCCCCCCCEEEecCCCHHHHHHHhhC-----CCCCccCCceecCc
Confidence 69999999999999999999 99999964 25899999998764
No 61
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.88 E-value=8.7e-10 Score=82.65 Aligned_cols=48 Identities=25% Similarity=0.567 Sum_probs=41.1
Q ss_pred ccccccccccCceeeCCCCe-ecHhhHHHHhccCCCcccccccccccccceeccch
Q psy9201 201 LCKICAENDKDIRIEPCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWTP 255 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~~ 255 (264)
.|+||++...+++.+||||. ||..|+..| ..||+||..+... +.+|.+
T Consensus 20 ~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~~--~~i~~p 68 (79)
T 2yho_A 20 LCMVCCEEEINSTFCPCGHTVCCESCAAQL-----QSCPVCRSRVEHV--QHVYLP 68 (79)
T ss_dssp BCTTTSSSBCCEEEETTCBCCBCHHHHTTC-----SBCTTTCCBCCEE--EECBCT
T ss_pred EeEEeCcccCcEEEECCCCHHHHHHHHHhc-----CcCCCCCchhhCe--EEEEeC
Confidence 69999999999999999999 999999866 3899999998774 555543
No 62
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=8.6e-10 Score=80.59 Aligned_cols=49 Identities=20% Similarity=0.482 Sum_probs=41.6
Q ss_pred cccccccccccCceeeCCCCe-ecHhhHHHHhccCCCcccccccccccccceeccch
Q psy9201 200 QLCKICAENDKDIRIEPCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWTP 255 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~~ 255 (264)
..|.||++..++++.+||||. ||..|+.. ...||+||..+.. .+.++.+
T Consensus 16 ~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~-----~~~CP~CR~~i~~--~~~i~~~ 65 (68)
T 2ea5_A 16 KDCVVCQNGTVNWVLLPCRHTCLCDGCVKY-----FQQCPMCRQFVQE--SFALSGP 65 (68)
T ss_dssp SCCSSSSSSCCCCEETTTTBCCSCTTHHHH-----CSSCTTTCCCCCC--EECCCSS
T ss_pred CCCCCcCcCCCCEEEECCCChhhhHHHHhc-----CCCCCCCCcchhc--eEEeecC
Confidence 369999999999999999999 99999984 3589999998876 4666554
No 63
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.80 E-value=2.7e-09 Score=84.63 Aligned_cols=46 Identities=20% Similarity=0.379 Sum_probs=38.3
Q ss_pred cccccccccccCc------------------eeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 200 QLCKICAENDKDI------------------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kdp------------------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
+.|+||++.+.++ +.++|||.||..||.+|+.. +.+||+||.++..
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREWEF 101 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT-CSBCSSSCSBCCE
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc-CCcCcCCCCccee
Confidence 4699999987654 55899999999999999975 5689999998653
No 64
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.75 E-value=3.6e-09 Score=76.08 Aligned_cols=53 Identities=8% Similarity=0.030 Sum_probs=48.9
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
.|+||.+.+.|||++ +|||.|+..||.+|+..+ .+||+++.++..++.+|+..
T Consensus 5 ~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~-~~cP~t~~~L~~~~Lip~~~ 58 (61)
T 2bay_A 5 LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDT-GNDPITNEPLSIEEIVEIVP 58 (61)
T ss_dssp CCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHH-SBCTTTCCBCCGGGCEECCC
T ss_pred EecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhC-CCCcCCcCCCChhhcEECcc
Confidence 699999999999999 999999999999999754 47999999999999999865
No 65
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.64 E-value=7e-09 Score=79.07 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=46.0
Q ss_pred ccccccccccCceee---CCCCeecHhhHHHHhcc-------CCCcccc--cccc--cccccceeccchhhhhh
Q psy9201 201 LCKICAENDKDIRIE---PCGHLLCTPCLTSWQVS-------NRSRILF--YLFY--FFSVKEIPLWTPTFVAK 260 (264)
Q Consensus 201 lC~ICle~~kdpvit---pCGH~FC~~CI~~wl~s-------~~~~CP~--CR~~--i~~~~vipl~~~~f~~~ 260 (264)
.|+||++...+++.. +|||.||..|+.+++.. ....||. |+.. +...++..+...+.++|
T Consensus 7 ~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ll~~~~~~k 80 (94)
T 1wim_A 7 GCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAAEIMQR 80 (94)
T ss_dssp CCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHHSCHHHHHH
T ss_pred CCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHHCCHHHHHH
Confidence 599999998876543 79999999999998752 1348999 9998 77776666665555444
No 66
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.61 E-value=1.7e-08 Score=94.87 Aligned_cols=42 Identities=26% Similarity=0.649 Sum_probs=38.8
Q ss_pred ccccccccccCceeeCCCCe-ecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHL-LCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~-FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|+||++.+.+++.+||||. ||..|+..| ..||.||..+...
T Consensus 297 ~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~-----~~CP~CR~~i~~~ 339 (345)
T 3t6p_A 297 TCKVCMDKEVSVVFIPCGHLVVCQECAPSL-----RKCPICRGIIKGT 339 (345)
T ss_dssp BCTTTSSSBCCEEEETTCCEEECTTTGGGC-----SBCTTTCCBCCEE
T ss_pred CCCccCCcCCceEEcCCCChhHhHHHHhcC-----CcCCCCCCCccCe
Confidence 69999999999999999999 999999887 5899999998764
No 67
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.9e-08 Score=91.88 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=47.6
Q ss_pred ccccccccccCceee-CCCCeecHhhHHHHhcc-CCCcccc--cccccccccceeccch
Q psy9201 201 LCKICAENDKDIRIE-PCGHLLCTPCLTSWQVS-NRSRILF--YLFYFFSVKEIPLWTP 255 (264)
Q Consensus 201 lC~ICle~~kdpvit-pCGH~FC~~CI~~wl~s-~~~~CP~--CR~~i~~~~vipl~~~ 255 (264)
.|+||++.+++||.. .|||.||..||.+|+.. +...||. |+..+...+..|-+..
T Consensus 183 ~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN~~L 241 (267)
T 3htk_C 183 TCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIM 241 (267)
T ss_dssp BCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEECHHH
T ss_pred ECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcCHHH
Confidence 699999999999985 99999999999999875 3458999 9999988888776553
No 68
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.57 E-value=7e-09 Score=83.98 Aligned_cols=46 Identities=20% Similarity=0.379 Sum_probs=0.0
Q ss_pred cccccccccccCc------------------eeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 200 QLCKICAENDKDI------------------RIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kdp------------------vitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
+.|+||++.+.++ +.++|||.||..||.+|+.. +.+||+||.++..
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREWEF 112 (117)
T ss_dssp -----------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-CCcCCCCCCeeee
Confidence 3699999987653 23589999999999999975 4689999998653
No 69
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=2.9e-08 Score=74.97 Aligned_cols=49 Identities=24% Similarity=0.595 Sum_probs=40.3
Q ss_pred cccccccccc--cCceeeCCC-----CeecHhhHHHHhccC-CCccccccccccccc
Q psy9201 200 QLCKICAEND--KDIRIEPCG-----HLLCTPCLTSWQVSN-RSRILFYLFYFFSVK 248 (264)
Q Consensus 200 elC~ICle~~--kdpvitpCG-----H~FC~~CI~~wl~s~-~~~CP~CR~~i~~~~ 248 (264)
..|.||++.. .++.++||+ |.|+..|+++|+... ..+||+||..+..+.
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 3699999866 457789996 999999999999753 368999999986543
No 70
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.18 E-value=9.4e-07 Score=70.08 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=43.8
Q ss_pred ccccccccccC-ceeeCCCCeecHhhHHHHhccCCCcccccccccccccceec
Q psy9201 201 LCKICAENDKD-IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPL 252 (264)
Q Consensus 201 lC~ICle~~kd-pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl 252 (264)
.|.+|.-..+. .++.||+|+||.+|+..|..++..+||.|+.++.+.+..+.
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~~ 55 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTR 55 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEEEG
T ss_pred ecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEecc
Confidence 48888876664 68899999999999999987666799999999988776655
No 71
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.11 E-value=3e-06 Score=63.40 Aligned_cols=47 Identities=26% Similarity=0.474 Sum_probs=38.0
Q ss_pred cccccccccccC-ceeeCCCCeecHhhHHHHhccC-CCccccccccccc
Q psy9201 200 QLCKICAENDKD-IRIEPCGHLLCTPCLTSWQVSN-RSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kd-pvitpCGH~FC~~CI~~wl~s~-~~~CP~CR~~i~~ 246 (264)
+.|.||++.... .....|+|.|+..|+.+|++.+ ..+||.||.+...
T Consensus 16 ~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp CBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 369999997753 3344899999999999999754 3689999998764
No 72
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=97.92 E-value=6.3e-06 Score=58.92 Aligned_cols=46 Identities=22% Similarity=0.507 Sum_probs=38.2
Q ss_pred cccccccccccCceeeCCCC-----eecHhhHHHHhcc-CCCcccccccccc
Q psy9201 200 QLCKICAENDKDIRIEPCGH-----LLCTPCLTSWQVS-NRSRILFYLFYFF 245 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH-----~FC~~CI~~wl~s-~~~~CP~CR~~i~ 245 (264)
..|.||++...++.+.||.+ .++..|+.+|+.. +..+||+|+..+.
T Consensus 7 ~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 7 PVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 36999999877777899654 7999999999973 4679999998765
No 73
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.60 E-value=9.5e-06 Score=76.94 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=35.7
Q ss_pred ccccccccccC----c--e--eeCCCCeecHhhHHHHhccC----------CCccccccccccc
Q psy9201 201 LCKICAENDKD----I--R--IEPCGHLLCTPCLTSWQVSN----------RSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kd----p--v--itpCGH~FC~~CI~~wl~s~----------~~~CP~CR~~i~~ 246 (264)
.|+||++...+ | + ..+|||.|+..|+.+|+.+. ...||.||.++..
T Consensus 310 ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 310 RCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp SCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 59999997655 2 1 24799999999999999632 1479999998764
No 74
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=96.28 E-value=0.0029 Score=56.32 Aligned_cols=49 Identities=24% Similarity=0.442 Sum_probs=38.1
Q ss_pred ccccccccccccC-ceeeCCCCeecHhhHHHHhccC-CCcccccccccccc
Q psy9201 199 FQLCKICAENDKD-IRIEPCGHLLCTPCLTSWQVSN-RSRILFYLFYFFSV 247 (264)
Q Consensus 199 ~elC~ICle~~kd-pvitpCGH~FC~~CI~~wl~s~-~~~CP~CR~~i~~~ 247 (264)
...|.+|.+.... .+...|+|.|+..|+.+|+..+ ...||.|+...+..
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 3369999996654 3444599999999999998753 46999999886654
No 75
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=95.04 E-value=0.021 Score=60.10 Aligned_cols=58 Identities=17% Similarity=0.033 Sum_probs=50.3
Q ss_pred hCCcccccccccccccCceeeCCC-CeecHhhHHHHhccCCCcccccccccccccceeccc
Q psy9201 195 MGSTFQLCKICAENDKDIRIEPCG-HLLCTPCLTSWQVSNRSRILFYLFYFFSVKEIPLWT 254 (264)
Q Consensus 195 ~~st~elC~ICle~~kdpvitpCG-H~FC~~CI~~wl~s~~~~CP~CR~~i~~~~vipl~~ 254 (264)
....+ .|+|-.+..+|||++|.| +.+=..+|++|+.+ ..+||+-|.++...+++|-..
T Consensus 888 iP~~F-~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~~-~~tdP~Tr~~L~~~~liPN~~ 946 (968)
T 3m62_A 888 VPDEF-LDPLMYTIMKDPVILPASKMNIDRSTIKAHLLS-DSTDPFNRMPLKLEDVTPNEE 946 (968)
T ss_dssp SCGGG-BCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCCGGGCEECHH
T ss_pred CcHHh-CCcchhhHHhCCeEcCCCCEEECHHHHHHHHhc-CCCCCCCCCCCCcccccccHH
Confidence 34445 699999999999999998 58999999999986 569999999999988888655
No 76
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=94.27 E-value=0.016 Score=43.79 Aligned_cols=30 Identities=27% Similarity=0.729 Sum_probs=25.6
Q ss_pred cccccccc-ccCcee--eCCCCeecHhhHHH-Hh
Q psy9201 201 LCKICAEN-DKDIRI--EPCGHLLCTPCLTS-WQ 230 (264)
Q Consensus 201 lC~ICle~-~kdpvi--tpCGH~FC~~CI~~-wl 230 (264)
.|.||.+. ..+++. +.|+|.||..|+.. +.
T Consensus 5 ~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 5 LCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp BCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 59999986 567776 89999999999997 53
No 77
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=91.45 E-value=0.12 Score=40.46 Aligned_cols=46 Identities=26% Similarity=0.407 Sum_probs=36.0
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCccccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVK 248 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~ 248 (264)
.|+.|.-..+.- +.-..|-+|..|+...+.. +..||+|..++..+-
T Consensus 30 nCKsCWf~~k~L-V~C~dHYLCl~CLtlmL~~-SdrCpIC~~pLPtkl 75 (99)
T 2ko5_A 30 FCKSCWFENKGL-VECNNHYLCLNCLTLLLSV-SNRCPICKMPLPTKL 75 (99)
T ss_dssp CCCSSCSCCSSE-EECSSCEEEHHHHHHTCSS-SSEETTTTEECCCCS
T ss_pred cChhhccccCCe-eeecchhhHHHHHHHHHhh-ccCCcccCCcCCcce
Confidence 599999988843 3444688999999998864 457999999887653
No 78
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=87.35 E-value=0.73 Score=47.31 Aligned_cols=48 Identities=15% Similarity=0.295 Sum_probs=32.4
Q ss_pred CcccccccccccccCc----------eeeCCCCe--------------------ecHhhHHHHhccC-------CCcccc
Q psy9201 197 STFQLCKICAENDKDI----------RIEPCGHL--------------------LCTPCLTSWQVSN-------RSRILF 239 (264)
Q Consensus 197 st~elC~ICle~~kdp----------vitpCGH~--------------------FC~~CI~~wl~s~-------~~~CP~ 239 (264)
-+...|+-|+.+..|| -.|.||-+ +|..|..++-.+. .-.||.
T Consensus 104 pD~a~C~~Cl~e~~dp~~rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~dRRfhAqp~aC~~ 183 (772)
T 4g9i_A 104 PDIAICDDCLRELFDPTNKRYMYPFIVCTNCGPRFTIIEDLPYDRENTTMKEFPMCDFCRSEYEDPLNRRYHAEPTACPV 183 (772)
T ss_dssp CCCCCCHHHHHHHSSTTSTTTTCTTCCCTTSSCCGGGCCSSSCCGGGSGGGGSCCCHHHHHHHHCSSSTTTTCTTCCCTT
T ss_pred CchhhhHHHHHHhcCCCCCccCCccccCCCCCchhhhhhcCCCCCCCCcCCCCCCChhHHHHhCCCCCCCCcCCCCCCcc
Confidence 3344688888866553 35677754 5999999987632 238999
Q ss_pred ccccc
Q psy9201 240 YLFYF 244 (264)
Q Consensus 240 CR~~i 244 (264)
|.=.+
T Consensus 184 CGP~l 188 (772)
T 4g9i_A 184 CGPSY 188 (772)
T ss_dssp TSCCE
T ss_pred CCceE
Confidence 96543
No 79
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=85.91 E-value=0.55 Score=36.02 Aligned_cols=31 Identities=32% Similarity=0.717 Sum_probs=26.0
Q ss_pred ccccccccccCceeeCC----CCeecHhhHHHHhc
Q psy9201 201 LCKICAENDKDIRIEPC----GHLLCTPCLTSWQV 231 (264)
Q Consensus 201 lC~ICle~~kdpvitpC----GH~FC~~CI~~wl~ 231 (264)
.|.+|.+.+.|.-.+.| +|.||-.|-...++
T Consensus 17 ~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk 51 (93)
T 2cs3_A 17 CCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIK 51 (93)
T ss_dssp CCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHH
T ss_pred EeecchhhhccCceeeCCCccCCeeeccccHHHHH
Confidence 69999999998655555 69999999998876
No 80
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=79.56 E-value=2.1 Score=33.18 Aligned_cols=47 Identities=19% Similarity=0.410 Sum_probs=36.1
Q ss_pred cccccccccccC-------ceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 200 QLCKICAENDKD-------IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kd-------pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
..|.||-+..-- +..-.|+--.|.+|.+-=.+.....||-|+...+.
T Consensus 17 qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred CccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccc
Confidence 379999996431 23457888899999987666677899999998875
No 81
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=72.81 E-value=1.3 Score=32.40 Aligned_cols=28 Identities=36% Similarity=0.911 Sum_probs=23.7
Q ss_pred ccccccccccCceeeCC-CCeecHhhHHHH
Q psy9201 201 LCKICAENDKDIRIEPC-GHLLCTPCLTSW 229 (264)
Q Consensus 201 lC~ICle~~kdpvitpC-GH~FC~~CI~~w 229 (264)
-|.||.++ ...+...| |-+||.+|..+.
T Consensus 10 WC~ICneD-AtlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 10 WCCICNED-ATLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp SCTTTCSC-CCEEETTTTSEEECSSHHHHH
T ss_pred eeEEeCCC-CeEEecCCCCceehHHHHHHH
Confidence 49999998 45778899 789999998774
No 82
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=72.25 E-value=3.3 Score=29.65 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=32.3
Q ss_pred cccccccccccCceeeCCCCeecHhhHHHHhccC---CCcccccccc
Q psy9201 200 QLCKICAENDKDIRIEPCGHLLCTPCLTSWQVSN---RSRILFYLFY 243 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~---~~~CP~CR~~ 243 (264)
..|.||.+...-..-..|...|+..|+...+... .=.||.|...
T Consensus 13 ~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 3699998765544555788999999998766532 2389999764
No 83
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=71.14 E-value=2.6 Score=29.92 Aligned_cols=39 Identities=18% Similarity=0.348 Sum_probs=29.6
Q ss_pred ccccccccccCce---eeCCCCeecHhhHHHHhccCCCccccc
Q psy9201 201 LCKICAENDKDIR---IEPCGHLLCTPCLTSWQVSNRSRILFY 240 (264)
Q Consensus 201 lC~ICle~~kdpv---itpCGH~FC~~CI~~wl~s~~~~CP~C 240 (264)
.|-.|...+.+.. ...|++.||.+|= ..+...-+.||.|
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD-~fiHe~Lh~CPgC 58 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCD-VFVHDSLHSCPGC 58 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHH-HTTTTTSCSSSTT
T ss_pred cccccCcccCCCccEECCccCcCcccchh-HHHHhhccCCcCC
Confidence 4999998886543 5689999999993 3445555789998
No 84
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=55.33 E-value=2.1 Score=39.35 Aligned_cols=43 Identities=21% Similarity=0.383 Sum_probs=32.6
Q ss_pred cccccccccccCceee----CCC--CeecHhhHHHHhccCCCcccccccc
Q psy9201 200 QLCKICAENDKDIRIE----PCG--HLLCTPCLTSWQVSNRSRILFYLFY 243 (264)
Q Consensus 200 elC~ICle~~kdpvit----pCG--H~FC~~CI~~wl~s~~~~CP~CR~~ 243 (264)
..|++|-..+.-.++. .=| +..|.-|-.+|-..+ -.||.|...
T Consensus 183 ~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R-~~C~~Cg~~ 231 (309)
T 2fiy_A 183 TLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVR-IKCSHCEES 231 (309)
T ss_dssp SSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCT-TSCSSSCCC
T ss_pred CCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecC-cCCcCCCCC
Confidence 4699999988765554 346 467999999997654 589999875
No 85
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=51.89 E-value=1.5 Score=32.56 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=30.9
Q ss_pred ccccccccccCc----eeeCCCCeecHhhHHHHhc-------cCCCccccccccccc
Q psy9201 201 LCKICAENDKDI----RIEPCGHLLCTPCLTSWQV-------SNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kdp----vitpCGH~FC~~CI~~wl~-------s~~~~CP~CR~~i~~ 246 (264)
.|.+|...+.-. -.-.||++||..|...... ...+.|-.|-..+..
T Consensus 23 ~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 79 (84)
T 1z2q_A 23 ACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRS 79 (84)
T ss_dssp BCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHT
T ss_pred CCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhh
Confidence 599999977532 3468999999999765421 123567777555443
No 86
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=51.59 E-value=5.4 Score=31.53 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=20.5
Q ss_pred ccCceeeCCCCeecHhhHHHHhccCCCccccccccc
Q psy9201 209 DKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYF 244 (264)
Q Consensus 209 ~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i 244 (264)
...+....||+.|+ +-+ .....||.|++.-
T Consensus 65 v~p~~C~~CG~~F~-----~~~-~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 65 IKPAQCRKCGFVFK-----AEI-NIPSRCPKCKSEW 94 (105)
T ss_dssp ECCCBBTTTCCBCC-----CCS-SCCSSCSSSCCCC
T ss_pred EECcChhhCcCeec-----ccC-CCCCCCcCCCCCc
Confidence 45677889999993 112 2345899998853
No 87
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=50.50 E-value=3.3 Score=38.24 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=0.0
Q ss_pred ccccccccccC----ceeeCCCCeecHhhHHHHhc------cCCCcccccccccc
Q psy9201 201 LCKICAENDKD----IRIEPCGHLLCTPCLTSWQV------SNRSRILFYLFYFF 245 (264)
Q Consensus 201 lC~ICle~~kd----pvitpCGH~FC~~CI~~wl~------s~~~~CP~CR~~i~ 245 (264)
.|.+|...+.- --...||++||..|...... ...+.|-.|-..+.
T Consensus 377 ~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l~ 431 (434)
T 3mpx_A 377 MCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELK 431 (434)
T ss_dssp -------------------------------------------------------
T ss_pred cCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHHH
Confidence 59999987652 33568999999999876542 12467888865443
No 88
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=50.48 E-value=1.7 Score=44.62 Aligned_cols=46 Identities=17% Similarity=0.359 Sum_probs=30.6
Q ss_pred ccccccccccccCc----------eeeCCCC--------------------eecHhhHHHHhccC-------CCcccccc
Q psy9201 199 FQLCKICAENDKDI----------RIEPCGH--------------------LLCTPCLTSWQVSN-------RSRILFYL 241 (264)
Q Consensus 199 ~elC~ICle~~kdp----------vitpCGH--------------------~FC~~CI~~wl~s~-------~~~CP~CR 241 (264)
...|+-|+.+..|| -.|.||- .+|..|..++-.+. .-.||.|.
T Consensus 111 ~a~C~~Cl~e~~dp~~Rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~~RRfhAqp~aC~~CG 190 (761)
T 3vth_A 111 MGVCEDCLRELKDPKDRRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFDCG 190 (761)
T ss_dssp BCCCHHHHHHHTCTTSTTTTCTTCCBTTBBCSGGGBCSSSCCGGGBGGGGSCCCHHHHHHHTCTTSTTTTCTTCCCTTTS
T ss_pred ccccHHHHHHhcCCCccccCCCcccCCCCCcchhhhccCCCCCCCCccccCCCCHHHHHHhcCcccccccCCCCcCCccC
Confidence 33577777765553 3567774 36999999987632 23799996
Q ss_pred ccc
Q psy9201 242 FYF 244 (264)
Q Consensus 242 ~~i 244 (264)
=.+
T Consensus 191 P~l 193 (761)
T 3vth_A 191 PSL 193 (761)
T ss_dssp CCE
T ss_pred Cee
Confidence 544
No 89
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=48.24 E-value=9.1 Score=28.07 Aligned_cols=44 Identities=16% Similarity=0.339 Sum_probs=29.8
Q ss_pred ccccccccccCc----eeeCCCCeecHhhHHHHhc-----cCCCccccccccc
Q psy9201 201 LCKICAENDKDI----RIEPCGHLLCTPCLTSWQV-----SNRSRILFYLFYF 244 (264)
Q Consensus 201 lC~ICle~~kdp----vitpCGH~FC~~CI~~wl~-----s~~~~CP~CR~~i 244 (264)
.|.+|...+.-. -.-.||.+||..|....+. ...+.|-.|-..+
T Consensus 21 ~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l 73 (82)
T 2yw8_A 21 HCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLL 73 (82)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTCSSCEEECHHHHHHT
T ss_pred cccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCCCCcCEECHHHHHHH
Confidence 599999977632 3458999999999865432 1234666665544
No 90
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=43.89 E-value=16 Score=30.06 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=32.0
Q ss_pred cccccccccccCceeeCCCCeecHhhHHHHhc----------cCCCccccccc
Q psy9201 200 QLCKICAENDKDIRIEPCGHLLCTPCLTSWQV----------SNRSRILFYLF 242 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH~FC~~CI~~wl~----------s~~~~CP~CR~ 242 (264)
+.|.+|.+.-.=.....|-..||..|+..-+. .+.-.||.|+.
T Consensus 64 d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 64 EQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 35999998765445557888999999996542 23458999974
No 91
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=43.72 E-value=7.8 Score=32.91 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=31.2
Q ss_pred cccccccccccCceeeCCCCeecHhhHHHHhcc---CCCccccccccc
Q psy9201 200 QLCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFYF 244 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~i 244 (264)
+.|.+|.+...-.....|...|+..|+..-+.. +.=.||.|+..-
T Consensus 8 ~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 8 DWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 369999876543444568888999998665442 234899998754
No 92
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=42.75 E-value=15 Score=25.48 Aligned_cols=43 Identities=14% Similarity=0.239 Sum_probs=29.4
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhc---cCCCcccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQV---SNRSRILFYLFY 243 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~---s~~~~CP~CR~~ 243 (264)
.|.+|.+...-.....|...|+..|+..-+. ...=.||.|+..
T Consensus 13 ~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 13 YCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 5999998543333446777899999986443 233489999753
No 93
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=42.01 E-value=8.8 Score=31.86 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=30.8
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc---CCCccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFYF 244 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~i 244 (264)
.|.+|.+...-.....|...|+..|+..-+.. +.=.||.|+..-
T Consensus 6 ~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 6 WCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred ccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 59999976554445568888999998655442 234799998654
No 94
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=41.28 E-value=57 Score=26.26 Aligned_cols=42 Identities=21% Similarity=0.388 Sum_probs=30.4
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHh----------ccCCCccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQ----------VSNRSRILFYLF 242 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl----------~s~~~~CP~CR~ 242 (264)
.|.||.+.-.-.--..|-..||..|+..-+ ..+.=.|+.|+.
T Consensus 59 ~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 59 QCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred cCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 599999865544445788999999998642 123458999965
No 95
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=40.13 E-value=3.6 Score=30.19 Aligned_cols=14 Identities=29% Similarity=1.011 Sum_probs=12.8
Q ss_pred CCCCeecHhhHHHH
Q psy9201 216 PCGHLLCTPCLTSW 229 (264)
Q Consensus 216 pCGH~FC~~CI~~w 229 (264)
.|||.||..|...|
T Consensus 55 ~C~~~FC~~C~~~w 68 (80)
T 2jmo_A 55 GCGFAFCRECKEAY 68 (80)
T ss_dssp CCSCCEETTTTEEC
T ss_pred CCCCeeccccCccc
Confidence 69999999999887
No 96
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=38.82 E-value=24 Score=27.05 Aligned_cols=30 Identities=17% Similarity=0.573 Sum_probs=21.8
Q ss_pred cccccccccccC--ceeeCCCCeecHhhHHHH
Q psy9201 200 QLCKICAENDKD--IRIEPCGHLLCTPCLTSW 229 (264)
Q Consensus 200 elC~ICle~~kd--pvitpCGH~FC~~CI~~w 229 (264)
+.|.||..-..+ -..--|+-+|+..|+.+.
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred cccCccccccccceeccccccccccHhhcccc
Confidence 479999853322 234568999999999985
No 97
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=38.38 E-value=39 Score=32.07 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=40.5
Q ss_pred ccccHHHHHHHHhhCCc------ccccccccccccCceee--CCCCeecHhhHHHHhc---------cCCCccccccc
Q psy9201 182 IKVTQEQYELYCEMGST------FQLCKICAENDKDIRIE--PCGHLLCTPCLTSWQV---------SNRSRILFYLF 242 (264)
Q Consensus 182 i~vtqEq~e~~~e~~st------~elC~ICle~~kdpvit--pCGH~FC~~CI~~wl~---------s~~~~CP~CR~ 242 (264)
+.+=+.+++.|.+.... ...|.+|-+.-.-.... .|...||..||...+. .+.=.|=+|.-
T Consensus 70 v~lC~~Ck~~y~~~~f~~D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 70 GGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SBCCHHHHHHHHTTTTCBCSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred cchhhHHHHHHhccCcccCCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 44557777777652211 22499999876544445 7999999999998874 13347888853
No 98
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=36.78 E-value=24 Score=27.04 Aligned_cols=48 Identities=13% Similarity=-0.027 Sum_probs=35.0
Q ss_pred ccccccccccC---ceeeCCCCeecHhhHHHHhccCCCcccccccccccccc
Q psy9201 201 LCKICAENDKD---IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSVKE 249 (264)
Q Consensus 201 lC~ICle~~kd---pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~~v 249 (264)
.|..|...+.+ .-...=|..+|..|..+.... ...|-.|..+|....+
T Consensus 34 ~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~-~~~C~~C~~~I~~~~~ 84 (122)
T 1m3v_A 34 KCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGN-SGAGGSGGHMGSGGDV 84 (122)
T ss_dssp CCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCC-CCSSSCSSCCSCCEES
T ss_pred CcCCCCCcccccCCeEEEECCeeecHHHHHHHcCC-CCccccCCCCcCchhe
Confidence 58889888752 344566889999999886643 2379999998876443
No 99
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=35.22 E-value=18 Score=25.88 Aligned_cols=28 Identities=21% Similarity=0.628 Sum_probs=21.4
Q ss_pred ccccccccccCc----eeeCCCCeecHhhHHH
Q psy9201 201 LCKICAENDKDI----RIEPCGHLLCTPCLTS 228 (264)
Q Consensus 201 lC~ICle~~kdp----vitpCGH~FC~~CI~~ 228 (264)
.|.+|...+.-. ---.||++||..|...
T Consensus 13 ~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 13 ACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred cccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 599999877532 2458999999999754
No 100
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.21 E-value=17 Score=26.63 Aligned_cols=29 Identities=21% Similarity=0.543 Sum_probs=21.9
Q ss_pred ccccccccccCc----eeeCCCCeecHhhHHHH
Q psy9201 201 LCKICAENDKDI----RIEPCGHLLCTPCLTSW 229 (264)
Q Consensus 201 lC~ICle~~kdp----vitpCGH~FC~~CI~~w 229 (264)
.|.+|...+.-. -.-.||.+||..|....
T Consensus 16 ~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 16 NCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp SCSSSCCCCCSSSCCEECSSSCCEECTTTSCEE
T ss_pred cCcCcCCccccchhhhhhcCCCcEEChhhcCCc
Confidence 599999977532 24589999999997543
No 101
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=35.10 E-value=16 Score=28.90 Aligned_cols=29 Identities=21% Similarity=0.620 Sum_probs=22.4
Q ss_pred ccccccccccCc----eeeCCCCeecHhhHHHH
Q psy9201 201 LCKICAENDKDI----RIEPCGHLLCTPCLTSW 229 (264)
Q Consensus 201 lC~ICle~~kdp----vitpCGH~FC~~CI~~w 229 (264)
.|.+|...+.-. -.-.||++||..|....
T Consensus 71 ~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~ 103 (125)
T 1joc_A 71 NCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 103 (125)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CCcCcCCccccccccccCCCCCeEEChHHhCCc
Confidence 599999977632 34589999999997654
No 102
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.93 E-value=14 Score=25.82 Aligned_cols=19 Identities=11% Similarity=0.020 Sum_probs=12.3
Q ss_pred HhccCCCcccccccccccc
Q psy9201 229 WQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 229 wl~s~~~~CP~CR~~i~~~ 247 (264)
|+..+.+.||.|+..|...
T Consensus 1 wi~~~~k~CP~C~~~Iek~ 19 (60)
T 1wd2_A 1 WIAANTKECPKCHVTIEKD 19 (60)
T ss_dssp CCCCCCCCCTTTCCCCSSC
T ss_pred CccccceECcCCCCeeEeC
Confidence 4444556788887777553
No 103
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=34.43 E-value=25 Score=33.29 Aligned_cols=48 Identities=15% Similarity=0.035 Sum_probs=34.2
Q ss_pred ccccccccccCce-eeCCCCeecHhhHHHHhc----cCCCcccccccccccccc
Q psy9201 201 LCKICAENDKDIR-IEPCGHLLCTPCLTSWQV----SNRSRILFYLFYFFSVKE 249 (264)
Q Consensus 201 lC~ICle~~kdpv-itpCGH~FC~~CI~~wl~----s~~~~CP~CR~~i~~~~v 249 (264)
.|++-....+.|+ -..|.|.-|-+- ..|+. .+.-.||+|.+.+...++
T Consensus 251 ~CPlS~~ri~~PvRg~~C~HlQCFDl-~sfL~~~~~~~~W~CPIC~k~~~~~dL 303 (371)
T 3i2d_A 251 QCPISYTRMKYPSKSINCKHLQCFDA-LWFLHSQLQIPTWQCPVCQIDIALENL 303 (371)
T ss_dssp BCTTTSSBCSSEEEETTCCSSCCEEH-HHHHHHHHHSCCCBCTTTCCBCCGGGE
T ss_pred cCCCccccccccCcCCcCCCcceECH-HHHHHHhhcCCceeCCCCCcccCHHHe
Confidence 5999999888876 457999866543 22332 345689999998876654
No 104
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=33.97 E-value=47 Score=26.74 Aligned_cols=44 Identities=7% Similarity=-0.000 Sum_probs=28.9
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|..|...+.+.....=|..+|..|..+-.. ..|..|...|...
T Consensus 35 ~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~---~~C~~C~~~I~~~ 78 (169)
T 2rgt_A 35 KCSDCHVPLAERCFSRGESVYCKDDFFKRFG---TKCAACQLGIPPT 78 (169)
T ss_dssp BCTTTCCBCCSCCEESSSCEECHHHHHHHHS---CBCTTTCCBCCTT
T ss_pred ccCCCCCcCCCCCcccCCeeeeccccccccc---ccccccccccCCC
Confidence 4777777665543445577888888766442 3677787777553
No 105
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=32.75 E-value=6.8 Score=31.35 Aligned_cols=42 Identities=17% Similarity=0.340 Sum_probs=29.0
Q ss_pred ccccccccccC----ceeeCCCCeecHhhHHHHhccCCCcccccccc
Q psy9201 201 LCKICAENDKD----IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFY 243 (264)
Q Consensus 201 lC~ICle~~kd----pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~ 243 (264)
.|..|...+.- --.-.||.+||..|...... ..+.|-.|-..
T Consensus 21 ~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~-~vRVC~~C~~~ 66 (120)
T 1y02_A 21 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN-GPRLCLLCQRF 66 (120)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC-----CCEEHHHHHH
T ss_pred cccCcCCccccccccccCCCCCCeeCHHHhCCCCC-CceECHHHHHH
Confidence 59999887753 23568999999999765543 35688888553
No 106
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=31.39 E-value=15 Score=28.77 Aligned_cols=23 Identities=17% Similarity=0.455 Sum_probs=19.7
Q ss_pred ccccccccccCceeeCCCCeecH
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCT 223 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~ 223 (264)
.|..|......-+.+.|||++|.
T Consensus 26 ~C~~C~~~~~~W~CL~CG~vgCg 48 (109)
T 3c5k_A 26 PCGDCGTIQENWVCLSCYQVYCG 48 (109)
T ss_dssp CCTTTCCCSSEEEETTTCCEEEC
T ss_pred cCccccCCCCeeeeeecCccccC
Confidence 59999987766778999999994
No 107
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=31.35 E-value=17 Score=27.13 Aligned_cols=45 Identities=18% Similarity=0.292 Sum_probs=31.1
Q ss_pred ccccccccccCc----eeeCCCCeecHhhHHHHhc------cCCCcccccccccc
Q psy9201 201 LCKICAENDKDI----RIEPCGHLLCTPCLTSWQV------SNRSRILFYLFYFF 245 (264)
Q Consensus 201 lC~ICle~~kdp----vitpCGH~FC~~CI~~wl~------s~~~~CP~CR~~i~ 245 (264)
.|.+|...+.-. -.-.||++||..|....+. ...+.|-.|-..+.
T Consensus 11 ~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~ 65 (88)
T 1wfk_A 11 RCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILT 65 (88)
T ss_dssp BCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHH
T ss_pred CCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHH
Confidence 599999877532 2468999999999865331 12367888866554
No 108
>3hyb_A RBCX protein; rubisco, protein complex assembly, chaperone; HET: SO4; 2.30A {Anabaena SP} PDB: 2wvw_I 2peo_A* 3rg6_C
Probab=31.33 E-value=23 Score=29.68 Aligned_cols=57 Identities=14% Similarity=0.218 Sum_probs=36.7
Q ss_pred hhHHHHHH--HHHHHHhhhhhhhhhhcccccccccCCcceeeccCCCchHHHHHhccccccchhhH
Q psy9201 88 DANNFLTS--LQAQLYYVFRLSCTRLGQWAIGYVTADGDILQTIPQNKSLCQALLDGYREGLSGLI 151 (264)
Q Consensus 88 ~~~a~~ty--v~~~ls~~f~~s~~rlgqw~ig~vs~d~~~~qtIp~nksl~qALLdg~Reg~s~i~ 151 (264)
--+.|+|| ||.+|+-+.-..- ....|+-.|++ +++ .+-+.++++|+.+.++--.||.
T Consensus 33 ~L~~YfTYqAvr~VLaQL~EtNP-~~y~wL~~F~s--~~i----qDGe~fl~~L~~E~~~LA~RIM 91 (155)
T 3hyb_A 33 TLQSYLTYQALRTVLAQLGETNP-PLALWLHNFSA--GKV----QDGEKYIEELFLEKPDLALRIM 91 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHT--TCC----SSHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHc--CCc----ccHHHHHHHHHhhCHHHHHHHH
Confidence 34689999 8888755542221 45679999998 454 4447777888887665333333
No 109
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=31.02 E-value=16 Score=25.27 Aligned_cols=44 Identities=11% Similarity=0.233 Sum_probs=28.9
Q ss_pred cccccccccccCceeeCCCCeecHhhHHHHhcc---CCCcccccccc
Q psy9201 200 QLCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFY 243 (264)
Q Consensus 200 elC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~ 243 (264)
..|.+|.+...-..-..|...|+..|+..-+.. ..=.||.|+..
T Consensus 10 ~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 10 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 369999875443344467778888898754332 23379999764
No 110
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=30.61 E-value=23 Score=26.34 Aligned_cols=46 Identities=13% Similarity=0.208 Sum_probs=31.5
Q ss_pred ccccccccccC----ceeeCCCCeecHhhHHHHhc-----cCCCccccccccccc
Q psy9201 201 LCKICAENDKD----IRIEPCGHLLCTPCLTSWQV-----SNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kd----pvitpCGH~FC~~CI~~wl~-----s~~~~CP~CR~~i~~ 246 (264)
.|.+|...+.- --...||++||..|...... ...+.|-.|-..+..
T Consensus 22 ~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~~ 76 (90)
T 3t7l_A 22 NCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETISK 76 (90)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHHH
T ss_pred cCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHHH
Confidence 59999987653 33568999999999876532 223577777655543
No 111
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=29.81 E-value=43 Score=25.35 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=30.8
Q ss_pred ccccccccccC-ceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 201 LCKICAENDKD-IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kd-pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
.|..|...+.+ .-...=|..+|..|..+.. .+.|..|.++|..
T Consensus 32 ~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~~---~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 32 CCFDCDSILAGEIYVMVNDKPVCKPCYVKNH---AVVCQGCHNAIDP 75 (126)
T ss_dssp BCTTTCCBCTTSEEEEETTEEEEHHHHHHHS---CCBCTTTCSBCCT
T ss_pred CcCCCCCCCCcCEEEeECCEEechHHhCcCc---CccCcccCCcCCc
Confidence 48888877665 3345567889999987643 3579999888875
No 112
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=29.59 E-value=16 Score=30.80 Aligned_cols=43 Identities=9% Similarity=0.264 Sum_probs=29.8
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc---CCCcccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFY 243 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~ 243 (264)
.|.+|.+...-.....|...|+..|+..-+.. +.-.||.|+..
T Consensus 4 ~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 4 ICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred cCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 59999977654445567778889998654432 23479999865
No 113
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=29.40 E-value=16 Score=31.10 Aligned_cols=29 Identities=21% Similarity=0.584 Sum_probs=22.1
Q ss_pred ccccccccccC----ceeeCCCCeecHhhHHHH
Q psy9201 201 LCKICAENDKD----IRIEPCGHLLCTPCLTSW 229 (264)
Q Consensus 201 lC~ICle~~kd----pvitpCGH~FC~~CI~~w 229 (264)
.|.+|...+.- --.-.||++||..|....
T Consensus 163 ~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 163 VCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred ccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 59999987753 234689999999997653
No 114
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=29.23 E-value=10 Score=26.02 Aligned_cols=44 Identities=11% Similarity=0.228 Sum_probs=29.9
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc---CCCccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFYF 244 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~i 244 (264)
.|.+|.+...-..-..|...|+..|+..-+.. +.=.||.|....
T Consensus 7 ~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 7 FCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp SCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 59999986443444578888999998754332 234799997654
No 115
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=28.64 E-value=19 Score=31.01 Aligned_cols=45 Identities=13% Similarity=0.277 Sum_probs=30.6
Q ss_pred ccccccccccC----ceeeCCCCeecHhhHHHHhc-------cCCCcccccccccc
Q psy9201 201 LCKICAENDKD----IRIEPCGHLLCTPCLTSWQV-------SNRSRILFYLFYFF 245 (264)
Q Consensus 201 lC~ICle~~kd----pvitpCGH~FC~~CI~~wl~-------s~~~~CP~CR~~i~ 245 (264)
.|.+|...+.- --.-.||++||..|...... ...+.|-.|-..+.
T Consensus 166 ~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l~ 221 (226)
T 3zyq_A 166 ECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLN 221 (226)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHHC
T ss_pred CCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHhh
Confidence 59999987753 23568999999999765432 12357777755443
No 116
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=27.84 E-value=17 Score=29.40 Aligned_cols=42 Identities=21% Similarity=0.315 Sum_probs=26.4
Q ss_pred cccccccccc-----CceeeCCCCeecHhhHHHHhcc---CCCccccccc
Q psy9201 201 LCKICAENDK-----DIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLF 242 (264)
Q Consensus 201 lC~ICle~~k-----dpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~ 242 (264)
.|.+|...+. ..+...|.|.+|..|-..--.. ..=.|-+|++
T Consensus 57 ~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k 106 (134)
T 1zbd_B 57 RCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 106 (134)
T ss_dssp BCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred cccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHH
Confidence 5999999773 3456788888888885432111 1225666654
No 117
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=27.80 E-value=25 Score=24.84 Aligned_cols=47 Identities=13% Similarity=0.160 Sum_probs=30.9
Q ss_pred cccccccccccCc---eeeCCCCeecHhhHHHHhcc---CCCccccccccccc
Q psy9201 200 QLCKICAENDKDI---RIEPCGHLLCTPCLTSWQVS---NRSRILFYLFYFFS 246 (264)
Q Consensus 200 elC~ICle~~kdp---vitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~i~~ 246 (264)
..|.+|.....+- ....|..-|+..|+.--... ..-.||.|+..+..
T Consensus 19 ~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k 71 (75)
T 2k16_A 19 WICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKK 71 (75)
T ss_dssp ECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCS
T ss_pred cCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhh
Confidence 3599998864332 23357778899998643332 34589999876654
No 118
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=27.58 E-value=41 Score=31.62 Aligned_cols=48 Identities=10% Similarity=-0.041 Sum_probs=34.0
Q ss_pred ccccccccccCce-eeCCCCeecHhhHHHHhc----cCCCcccccccccccccc
Q psy9201 201 LCKICAENDKDIR-IEPCGHLLCTPCLTSWQV----SNRSRILFYLFYFFSVKE 249 (264)
Q Consensus 201 lC~ICle~~kdpv-itpCGH~FC~~CI~~wl~----s~~~~CP~CR~~i~~~~v 249 (264)
.|++-....+.|+ -..|.|.-|-+- ..|+. .+.-.||+|.+.+..+++
T Consensus 217 ~CPlS~~ri~~P~Rg~~C~HlqCFDl-~sfL~~~~~~~~W~CPiC~k~~~~~dL 269 (360)
T 4fo9_A 217 MCPLGKMRLTIPCRAVTCTHLQCFDA-ALYLQMNEKKPTWICPVCDKKAAYESL 269 (360)
T ss_dssp BCTTTCSBCSSEEEETTCCCCCCEEH-HHHHHHHHHSCCCBCTTTCSBCCGGGE
T ss_pred eCCCccceeccCCcCCCCCCCccCCH-HHHHHHHhhCCCeECCCCCcccCHHHe
Confidence 5999999888875 567999866543 22332 345689999998876553
No 119
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.09 E-value=13 Score=25.22 Aligned_cols=42 Identities=12% Similarity=0.240 Sum_probs=27.6
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc---CCCccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLF 242 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~ 242 (264)
.|.+|.+...-..-..|...|+..|+..-+.. ..=.||.|..
T Consensus 11 ~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 11 FCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 59999986543444567778888888754332 2236888854
No 120
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=26.86 E-value=44 Score=27.25 Aligned_cols=44 Identities=7% Similarity=0.017 Sum_probs=31.1
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhccCCCcccccccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFSV 247 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~~ 247 (264)
.|..|...+.+.....=|..+|..|..+-. .+.|..|+..|...
T Consensus 89 ~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f---~~kC~~C~~~I~~~ 132 (182)
T 2jtn_A 89 KCSDCHVPLAERCFSRGESVYCKDDFFKRF---GTKCAACQLGIPPT 132 (182)
T ss_dssp SCTTTCCCCSSCCEEETTEEECHHHHHHTT---SCCCTTTCCCCCSS
T ss_pred ccCCCCCccCCCceeECCEeeecCcccccc---ccccccCCCccCCC
Confidence 488888776654344557889999987643 35799998888654
No 121
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=26.11 E-value=63 Score=27.07 Aligned_cols=60 Identities=13% Similarity=0.257 Sum_probs=36.9
Q ss_pred cccHHHHHHHHhhCCc------ccccccccccccCceee--CCCCeecHhhHHHHhcc---------CCCccccccc
Q psy9201 183 KVTQEQYELYCEMGST------FQLCKICAENDKDIRIE--PCGHLLCTPCLTSWQVS---------NRSRILFYLF 242 (264)
Q Consensus 183 ~vtqEq~e~~~e~~st------~elC~ICle~~kdpvit--pCGH~FC~~CI~~wl~s---------~~~~CP~CR~ 242 (264)
.+=+..++.|.+.... ...|.||-+.-.-.... .|-..||..||+..+.. +.=.|=+|.-
T Consensus 57 ~lC~~Ck~~y~e~~f~~DeDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 57 GMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp EECHHHHHHHHHHTTCBCTTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred hhhHHHHHHHhhcccccCCCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 3445666666542211 22499999865322223 58889999999988652 2236888853
No 122
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=25.55 E-value=28 Score=28.73 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=29.3
Q ss_pred ccccccccc-----cCceeeCCCCeecHhhHHHHhcc-CCCcccccccc
Q psy9201 201 LCKICAEND-----KDIRIEPCGHLLCTPCLTSWQVS-NRSRILFYLFY 243 (264)
Q Consensus 201 lC~ICle~~-----kdpvitpCGH~FC~~CI~~wl~s-~~~~CP~CR~~ 243 (264)
.|.+|...+ ...+...|.|.+|..|-. |..+ ..=.|-+|++.
T Consensus 70 ~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~-~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 70 HCARCLQPYRLLLNSRRQCLECSLFVCKSCSH-AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp BCTTTCCBGGGCSSCCEECTTTCCEECGGGEE-CCSSSSSCEEHHHHHH
T ss_pred cchhhcCccccccCCCCcCCCCCchhhccccc-ccCCCCcEeeHHHHHH
Confidence 599999975 346778999999999972 3322 23367777653
No 123
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=25.54 E-value=28 Score=26.41 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=23.7
Q ss_pred cccccccccccC---ceeeCCCCeecHhhHHHHhc
Q psy9201 200 QLCKICAENDKD---IRIEPCGHLLCTPCLTSWQV 231 (264)
Q Consensus 200 elC~ICle~~kd---pvitpCGH~FC~~CI~~wl~ 231 (264)
..|.+|.+.-.. ..-..|+..|+..|+.....
T Consensus 8 ~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 8 ANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT 42 (111)
T ss_dssp SCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC
T ss_pred CCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc
Confidence 469999886543 34568999999999976543
No 124
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=24.83 E-value=8.6 Score=28.35 Aligned_cols=14 Identities=29% Similarity=1.094 Sum_probs=12.8
Q ss_pred CCCCeecHhhHHHH
Q psy9201 216 PCGHLLCTPCLTSW 229 (264)
Q Consensus 216 pCGH~FC~~CI~~w 229 (264)
.||+.||..|-..|
T Consensus 48 ~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 48 QCHQTFCVRCKRQW 61 (86)
T ss_dssp TTCCEECSSSCSBC
T ss_pred CCCCccccccCCch
Confidence 49999999999888
No 125
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=24.41 E-value=38 Score=25.62 Aligned_cols=43 Identities=9% Similarity=0.264 Sum_probs=29.7
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc---CCCcccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFY 243 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~ 243 (264)
.|.+|.+...-.....|.-.|...|+..-+.. +.=.||.|+..
T Consensus 27 ~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 27 ICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp CCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred cCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 69999986543344467778999998665542 23379999764
No 126
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=22.78 E-value=64 Score=24.47 Aligned_cols=45 Identities=11% Similarity=0.002 Sum_probs=28.7
Q ss_pred ccccccccccC---ceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 201 LCKICAENDKD---IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kd---pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
.|..|...+.+ .-...=|..+|..|..+.... ...|..|.+.|..
T Consensus 31 ~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~-~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 31 SCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQ-DGLCASCDKRIRA 78 (131)
T ss_dssp BCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCC-CEECTTTCCEECT
T ss_pred ccCcCCCccccCCCeEEEECCEEeecCchhhhCCC-ccChhhcCCccCc
Confidence 47777776642 334455777888887765432 1268888877764
No 127
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=21.68 E-value=43 Score=27.53 Aligned_cols=45 Identities=13% Similarity=0.090 Sum_probs=29.1
Q ss_pred ccccccccccC---ceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 201 LCKICAENDKD---IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 201 lC~ICle~~kd---pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
.|..|...+.+ .....=|..+|..|..+.... ...|..|.+.|..
T Consensus 34 ~C~~C~~~L~~~g~~~~~~~g~~yC~~cy~~~~~~-~~~C~~C~~~I~~ 81 (188)
T 1rut_X 34 KCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGN-SGACSACGQSIPA 81 (188)
T ss_dssp BCTTTCCBHHHHCSEEEEETTEEECHHHHHHHHSC-CEECTTTCCEECT
T ss_pred ccCCCCcccccCCceEEEeCCcccccccccccccc-CCccccCCCcccc
Confidence 47777776653 344455778888887765432 1258888887764
No 128
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=21.06 E-value=30 Score=27.94 Aligned_cols=28 Identities=11% Similarity=-0.179 Sum_probs=17.5
Q ss_pred ceeeCCCCeecHhhHHHHhccCCCccccccccccc
Q psy9201 212 IRIEPCGHLLCTPCLTSWQVSNRSRILFYLFYFFS 246 (264)
Q Consensus 212 pvitpCGH~FC~~CI~~wl~s~~~~CP~CR~~i~~ 246 (264)
-+...|||.|=.. .....||.|..++..
T Consensus 133 y~C~~Cg~~~~~~-------~~~~~Cp~CG~~~~~ 160 (165)
T 2lcq_A 133 YVCIGCGRKFSTL-------PPGGVCPDCGSKVKL 160 (165)
T ss_dssp EEESSSCCEESSC-------CGGGBCTTTCCBEEE
T ss_pred EECCCCCCcccCC-------CCCCcCCCCCCccee
Confidence 3456788877421 123489999987644
No 129
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=20.68 E-value=28 Score=24.33 Aligned_cols=43 Identities=19% Similarity=0.287 Sum_probs=28.6
Q ss_pred ccccccccccCceeeCCCCeecHhhHHHHhcc---CCCcccccccc
Q psy9201 201 LCKICAENDKDIRIEPCGHLLCTPCLTSWQVS---NRSRILFYLFY 243 (264)
Q Consensus 201 lC~ICle~~kdpvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~~ 243 (264)
.|.||.+...-.....|...|+..|+..-+.. +.=.||.|...
T Consensus 10 ~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 10 ECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 69999976443344467778888998753331 23379999754
No 130
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=20.58 E-value=54 Score=21.33 Aligned_cols=42 Identities=19% Similarity=0.329 Sum_probs=26.8
Q ss_pred ccccccccccC---ceeeCCCCeecHhhHHHHhcc---CCCccccccc
Q psy9201 201 LCKICAENDKD---IRIEPCGHLLCTPCLTSWQVS---NRSRILFYLF 242 (264)
Q Consensus 201 lC~ICle~~kd---pvitpCGH~FC~~CI~~wl~s---~~~~CP~CR~ 242 (264)
.|.||.+.... ..-..|...|+..|+..-+.. +.=.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 48888865432 223467778999999653332 2337999965
No 131
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=20.31 E-value=41 Score=25.45 Aligned_cols=24 Identities=17% Similarity=0.414 Sum_probs=18.1
Q ss_pred ccccccccccC-ceeeC--CCCeecHh
Q psy9201 201 LCKICAENDKD-IRIEP--CGHLLCTP 224 (264)
Q Consensus 201 lC~ICle~~kd-pvitp--CGH~FC~~ 224 (264)
.|..|.....+ -..+. |||++|.+
T Consensus 27 ~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 27 TCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp CCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred cCcCcCCCCCCceeeecccCCCcccCC
Confidence 59999955444 46677 99999954
Done!