RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9208
(446 letters)
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor
ectodomain, protease-like domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 294
Score = 104 bits (259), Expect = 9e-26
Identities = 48/293 (16%), Positives = 81/293 (27%), Gaps = 43/293 (14%)
Query: 191 ATLIRSVTPYSLATPHTGHQSYDAAVKPIPTACIAPEYAEMLYRMYRRGDGPVVVSINID 250
L R ++ +T T +P + + + + + + + D
Sbjct: 4 DDLKRKLSEKLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSKVWRD 63
Query: 251 ARNVGTTNTRNTIVQIRGRECPDKVVITSGHLDSWDVGQGAMDDGGGAF----------- 299
V N I+G PD V+ D+W GA G G
Sbjct: 64 QHFVKEIKILNIFGVIKGFVEPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSD 121
Query: 300 ------------ISGILWTAEEQGYVGAIAYVKKHQEELKNITVAM-ESDDGTFTPFGLS 346
I W+A + G VGA +++ + L D
Sbjct: 122 MVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFK 181
Query: 347 LKGSPEAACILNKVLRLFKPINATRLV---------QSKYPVGSDIELFQEK-NIPGVAL 396
+ SP ++ K ++ K + + K + + F IP V+
Sbjct: 182 VSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAYSGIPAVSF 241
Query: 397 LNDNAKYFWYHHTRADTMSVLDSDTLDL------CTALWGGVAYILADLSVEL 443
+ Y T DT L +L + G L VEL
Sbjct: 242 CFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTH-DVEL 293
Score = 35.6 bits (81), Expect = 0.010
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 79 DKFGPRMTGSEALENSIDFMVKESKDFGLEVWTENVTAPKWERHF 123
+ + PR GS+ EN ++ + ++F L + K +
Sbjct: 29 NSYVPREAGSQKDENLALYVENQFREFKLSKVWRDQHFVKEIKIL 73
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II
FOLH1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 304
Score = 87.2 bits (215), Expect = 8e-20
Identities = 48/302 (15%), Positives = 99/302 (32%), Gaps = 61/302 (20%)
Query: 196 SVTPYSLATPHTGHQSYDAAVKPIPTACIAPEYAEMLYRMYRRGD--GPVVVSINIDARN 253
++ + + + IP + ++ ++ + G V +
Sbjct: 1 NMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVL 60
Query: 254 VGTTNTRNTIVQIRGRECPDKVVITSGHLDSWDVGQGAMDDGGGAFISG----------- 302
+ T N I +RG PD+ VI GH DSW G +D GA +
Sbjct: 61 LEVTRIYNVIGTLRGAVEPDRYVILGGHRDSW--VFGGIDPQSGAAVVHEIVRSFGTLKK 118
Query: 303 -----------ILWTAEEQGYVGAIAYVKKHQEELKNITVAM-ESDDGTFTPFGLSLKGS 350
W AEE G +G+ + +++ L+ VA +D + L + +
Sbjct: 119 EGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCT 178
Query: 351 PEAACILNKVLRLFKPINATRLVQSKY---------------------PVGSDIELFQEK 389
P +++ + + K + +S Y G+D E+F ++
Sbjct: 179 PLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQR 238
Query: 390 -NIPGVAL------LNDNAKYFWYHHTRADTMSVLDS------DTLDLCTALWGGVAYIL 436
I + + +H+ +T +++ + GG+ + L
Sbjct: 239 LGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFEL 298
Query: 437 AD 438
A+
Sbjct: 299 AN 300
Score = 30.2 bits (67), Expect = 0.40
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 83 PRMTGSEALENSIDFMVKESKDFGLEVWTENVTAPKWE 120
P + G+E + + K+FGL+ E
Sbjct: 25 PHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLE 62
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica
[TaxId: 671]}
Length = 291
Score = 81.4 bits (200), Expect = 8e-18
Identities = 43/213 (20%), Positives = 72/213 (33%), Gaps = 34/213 (15%)
Query: 257 TNTRNTIVQIRGRECPDKVVITSGHLDSW--------DVGQGAMDDGGGAF--------- 299
N ++ ++ I G E PD+ ++ GHLDS V GA DD G
Sbjct: 73 YNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVL 132
Query: 300 ----------ISGILWTAEEQGYVGAIAYVKKHQEELKNITVAMESDDGTFTPFG----- 344
I+ + + AEE G G+ +++ E KN+ A++ D +
Sbjct: 133 SENNFQPKRSIAFMAYAAEEVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVF 192
Query: 345 LSLKGSPEAACILNKVLRLFKPINATRLVQSKYPVGSDIELFQEKNIPGVALLN-DNAKY 403
++ L +++ + P Y SD + P Y
Sbjct: 193 ITDYTDSNFTQYLTQLMDEYLPSLTYGFDTCGYA-CSDHASWHNAGYPAAMPFESKFNDY 251
Query: 404 FWYHHTRADTMSVLDSDTLDLCTALWGGVAYIL 436
HT DT++ D G+AY +
Sbjct: 252 NPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAI 284
Score = 33.3 bits (75), Expect = 0.046
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 48 SYQPVVDRIIAAVSQGGHFQAHTYSTLADFVDKFGPRMTGSEALENSIDFMVKESKDFGL 107
+ Q V + V + T++ F R + + + D++ E +
Sbjct: 5 TQQATVTAWLPQVDA-----SQITGTISSLES-FTNRFYTTTSGAQASDWIASEWQALSA 58
Query: 108 EVWTENVT 115
+ +V
Sbjct: 59 SLPNASVK 66
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus
[TaxId: 1911]}
Length = 277
Score = 75.1 bits (183), Expect = 9e-16
Identities = 41/230 (17%), Positives = 71/230 (30%), Gaps = 42/230 (18%)
Query: 246 SINIDARNVGTTNTRNTIVQIRGRECPDKVVITSGHLDSWDVGQGAMDDGGG-------- 297
+ + G N I G P+KV++ HLDS G G D+G G
Sbjct: 51 TTTLQQFTSGGATGYNLIANWPGG-DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETA 109
Query: 298 -----------AFISGILWTAEEQGYVGAIAYVKKHQEELKNITVAMESDD--GTFTPFG 344
+ W AEE G +G+ YV ++ + D G+ P
Sbjct: 110 LAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGY 169
Query: 345 LSLKGSPEAACILNKVLRLFKPINATRLVQSKYPVGSDIELFQEKNIPGVALLND----- 399
P F +N ++++ SD F+ +P L
Sbjct: 170 FVYDDDPVIEKTFKNY---FAGLNVPTEIETEGDGRSDHAPFKNVGVPVGGLFTGAGYTK 226
Query: 400 ------------NAKYFWYHHTRADTMSVLDSDTLDLCTALWGGVAYILA 437
+ +H+ D++S ++ LD + + L+
Sbjct: 227 SAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLS 276
Score = 35.1 bits (79), Expect = 0.013
Identities = 7/58 (12%), Positives = 18/58 (31%)
Query: 79 DKFGPRMTGSEALENSIDFMVKESKDFGLEVWTENVTAPKWERHFEKVTLVKPWKSDI 136
+ G R G + S+D++ + G + T+ + + +
Sbjct: 22 NNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKV 79
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase,
QPCT {Human (Homo sapiens) [TaxId: 9606]}
Length = 329
Score = 52.1 bits (124), Expect = 5e-08
Identities = 32/239 (13%), Positives = 52/239 (21%), Gaps = 69/239 (28%)
Query: 250 DARNVGTTNTRNTIVQIRGRECPDKVVITSGHLDSWDVGQ-------GAMDDGGGAF--- 299
G + N I + + ++ + H DS GA D
Sbjct: 79 SQTPYGYRSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMML 136
Query: 300 ------------------------ISGILWTAEEQGY--------VGAIAYVKKHQEELK 327
+ I + EE G+ K
Sbjct: 137 ELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPH 196
Query: 328 NITVAMESD----------------DGTFTPFGLSLKGSPEAACILNKVLRLFKPINATR 371
S + TF F + E + L +
Sbjct: 197 PPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHS 256
Query: 372 LVQSK-------YPVGSDIELFQEKNIPGVALLNDNAKYFWYHHTRADTMSVLDSDTLD 423
L + D F + +P + L+ + HT D LD T+D
Sbjct: 257 LEGRYFQNYSYGGVIQDDHIPFLRRGVPVLHLIPSP--FPEVWHTMDDNEENLDESTID 313
Score = 34.4 bits (78), Expect = 0.021
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 13/72 (18%)
Query: 47 NSYQPV------VDRIIAAVSQGGHFQAHTYSTLADFVDKFGPRMTGSEALENSIDFMVK 100
N +QP + +I S +Q L R GS + +++
Sbjct: 9 NYHQPAILNSSALRQIAEGTSISEMWQND----LQPL---LIERYPGSPGSYAARQHIMQ 61
Query: 101 ESKDFGLEVWTE 112
+ + E
Sbjct: 62 RIQRLQADWVLE 73
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC
catalytic domain {Escherichia coli [TaxId: 562]}
Length = 293
Score = 30.9 bits (69), Expect = 0.26
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 261 NTIVQIRGRECPDKVVITSGHLDSWDVGQGAMDDGGGAFI 300
N ++ G E P +VV++ H+D+ G +D GA
Sbjct: 60 NLYGRLNGTEYPQEVVLSGSHIDTVV-NGGNLDGQFGALA 98
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2,
catalytic domain {Pseudomonas sp., strain rs-16 [TaxId:
306]}
Length = 276
Score = 30.2 bits (67), Expect = 0.41
Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 8/120 (6%)
Query: 303 ILWTAEEQGYVGAIAYVKKHQEELKNITVAMESDDGTFTPFGLSLKGSPEAACILNKVLR 362
+ T EE+G G+ +++ + + + G + +++K +
Sbjct: 145 LFNTDEEKGSFGSRDLIQEEAKLADYVLSFEPTSAGDEKLSLGTFNAGEGGKKLVDKAVA 204
Query: 363 LFKPINATRLVQSKYPVGSDIELFQEKNI--------PGVALLNDNAKYFWYHHTRADTM 414
+K T V+ + G+D PG +D A+Y
Sbjct: 205 YYKEAGGTLGVEERTGGGTDAAYAALSGKPVIESLGLPGFGYHSDKAEYVDISAIPRRLY 264
>d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 388
Score = 29.7 bits (66), Expect = 0.65
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 127 TLVKPWKSDIPVSTLGGSVGTPQGGITAEVAGKIVVFNQDFVSYGETVKYRSKGASVASK 186
L+ K V + QGG TA +++V + S E + S++
Sbjct: 96 GLLPELKRGGRVH----IIAHSQGGQTA----RMLVSLLENGSQEEREYAKEHNVSLSPL 147
Query: 187 YGAVATLIRSVTPYSLATPHTGHQSYDAAVKPIPTACIAPEYAEMLYR 234
+ + SVT ++ATPH G + + E
Sbjct: 148 FEGGHRFVLSVT--TIATPHDGTTLVNMVDFTDRFFDLQKAVLEAAAV 193
>d1tuaa1 d.51.1.1 (A:1-84) Hypothetical protein APE0754 {Aeropyrum
pernix [TaxId: 56636]}
Length = 84
Score = 27.1 bits (60), Expect = 1.4
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Query: 313 VGAIAYVKKHQEELKNITVAMESDDGTFTPFGLSLKGSPEAAC----ILNKVLRLFKPIN 368
+G VK + +++++ + P ++ + F P
Sbjct: 18 IGPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAISLGFPPEK 77
Query: 369 ATRLV 373
A RL+
Sbjct: 78 AFRLL 82
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B),
Pyr module {Pseudomonas putida [TaxId: 303]}
Length = 204
Score = 27.7 bits (61), Expect = 2.4
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 85 MTGSEALENSIDFMVKESKDFGLEVWTENVTAPK--WERHFEKVTLVKPWKSDIPVSTLG 142
MT +AL +++D M++ + + V+ ++V + T + +
Sbjct: 5 MTMIQALRSAMDVMLERDDN--VVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISES 62
Query: 143 GSVGTPQGGITAEVAGKIVVFNQD--FVSYGETVKYRSKGASVASKYGAVATLIRSVTPY 200
G VGT G + + + D + + + V ++ ++ +R
Sbjct: 63 GIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG 122
Query: 201 SLATPHTGHQSYDAAVKPIPTACIA----PEYAEMLYRMYRRGDGPVVV 245
+ T QS +A + P A+ L D PV+
Sbjct: 123 GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIF 171
>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB,
N-terminal domain {Bacillus stearothermophilus [TaxId:
1422]}
Length = 192
Score = 27.7 bits (61), Expect = 2.5
Identities = 27/177 (15%), Positives = 48/177 (27%), Gaps = 24/177 (13%)
Query: 84 RMTGSEALENSIDFMVKESKD---FGLEVWTENVTAPKWERHFEKVTLVKPWKSDIPVST 140
+MT +A+ +++ +K + FG +V V + +
Sbjct: 2 QMTMVQAITDALRIELKNDPNVLIFGEDVG---VNGGVFRATEGLQAEFGEDRVFDTPLA 58
Query: 141 LGGSVGTPQGGITAEVAGKIVVFNQDFVSYGE--------TVKYRSKGASVASKYGAVAT 192
G G G + FV ++YR+ G +Y T
Sbjct: 59 ESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGG-----RYHMPIT 113
Query: 193 LIRSVTPYSLATPHTGHQSYDAAVKPIPT----ACIAPEYAEMLYRMYRRGDGPVVV 245
+ S + V P P A+ L R + PV+
Sbjct: 114 IRSPFGGGVHTPELHS-DSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIF 169
>d2g5ca1 a.100.1.12 (A:201-310) Prephenate dehydrogenase TyrA
{Aquifex aeolicus [TaxId: 63363]}
Length = 110
Score = 26.5 bits (58), Expect = 3.2
Identities = 10/61 (16%), Positives = 15/61 (24%), Gaps = 1/61 (1%)
Query: 54 DRIIAAVSQGGHFQAHTY-STLADFVDKFGPRMTGSEALENSIDFMVKESKDFGLEVWTE 112
D + VS H A TL + K +++ E
Sbjct: 6 DYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFKDFTRIAKSDPIMWRDIFLE 65
Query: 113 N 113
N
Sbjct: 66 N 66
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048,
catalytic domain {Thermotoga maritima [TaxId: 2336]}
Length = 248
Score = 27.2 bits (59), Expect = 3.7
Identities = 8/47 (17%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Query: 83 PRMTGSEALENSIDFMVKESKDFGLEVWTE---NVTAPKWERHFEKV 126
+G E N + ++ + F E T ++ K + K+
Sbjct: 14 DGPSGYE--TNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKGIGKL 58
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK
{Escherichia coli [TaxId: 562]}
Length = 187
Score = 27.1 bits (60), Expect = 4.0
Identities = 10/64 (15%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 206 HTGHQSYDAAVKPIPTACIAPEYAEMLYRMYRRGDGPVVVSINIDARNVGTTNTRNTIVQ 265
+ + +++ ++ + A P + +YR ++ I A + G T +V+
Sbjct: 30 YYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVT--VVVE 87
Query: 266 IRGR 269
++ R
Sbjct: 88 LQAR 91
>d1mvla_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase
(PPC decarboxylase, halotolerance protein Hal3a)
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 182
Score = 26.2 bits (57), Expect = 7.4
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Query: 231 MLYRMYRRGDGPVVVSINIDARNVGTTNTRNTIVQIRGRECPDKVVI--TSGHLDSWDVG 288
P+ V+ ++ N T + + +I L S D G
Sbjct: 105 TCIIRAWDYTKPLFVAPAMNTL---MWNNPFTERHLLSLDELGITLIPPIKKRLASGDYG 161
Query: 289 QGAM 292
GAM
Sbjct: 162 NGAM 165
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate
dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId:
9606]}
Length = 192
Score = 25.8 bits (56), Expect = 8.7
Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 16/173 (9%)
Query: 84 RMTGSEALENSIDFMVKESKD---FGLEVWTE----NVTAPKWERHFEKVTLVKPWKSDI 136
++T +A+ +D ++ + G EV V+ W+++ +K + P
Sbjct: 3 QVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTP---IS 59
Query: 137 PVSTLGGSVGTPQGGITAEVAGKIVVFNQDFVSYGETVKYRSKGASVASKYGAVATLIRS 196
+ G +VG G+ + + FN + + + +K ++ V + R
Sbjct: 60 EMGFAGIAVGAAMAGLR--PICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRG 117
Query: 197 VTPYSLATPHTGHQSYDAAVKPIPT----ACIAPEYAEMLYRMYRRGDGPVVV 245
S Q + A P + E A+ L + R + PVVV
Sbjct: 118 PNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVV 170
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid
dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId:
9606]}
Length = 203
Score = 25.9 bits (56), Expect = 10.0
Identities = 20/172 (11%), Positives = 41/172 (23%), Gaps = 14/172 (8%)
Query: 84 RMTGSEALENSIDFMVKESKD---FGLEVWTENVTAPKWERHFEKVTLVKPWKSDIPVST 140
+M +++ +++D + + FG +V V + +
Sbjct: 19 KMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGV----FRCTVGLRDKYGKDRVFNTPLC 74
Query: 141 LGGSVGTPQGGITAEVAGKIVVFNQDFVSYGETVKYRSKGASVASKYGAVATLIRSVTPY 200
G VG G + D++ ++
Sbjct: 75 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSP 134
Query: 201 SLATPHTGH---QSYDAAVKPIPTACIA----PEYAEMLYRMYRRGDGPVVV 245
H QS +A P + P A+ L P +
Sbjct: 135 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIF 186
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0465 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,655,556
Number of extensions: 77484
Number of successful extensions: 190
Number of sequences better than 10.0: 1
Number of HSP's gapped: 180
Number of HSP's successfully gapped: 24
Length of query: 446
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 358
Effective length of database: 1,199,356
Effective search space: 429369448
Effective search space used: 429369448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.2 bits)