Query psy9209
Match_columns 349
No_of_seqs 1011 out of 1716
Neff 11.9
Searched_HMMs 29240
Date Fri Aug 16 21:41:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w3b_A UDP-N-acetylglucosamine 100.0 5.5E-42 1.9E-46 291.6 32.4 305 3-328 74-378 (388)
2 1w3b_A UDP-N-acetylglucosamine 100.0 7E-41 2.4E-45 284.8 31.1 276 40-327 68-343 (388)
3 3ieg_A DNAJ homolog subfamily 100.0 1.3E-38 4.4E-43 267.7 34.9 309 2-327 9-344 (359)
4 2y4t_A DNAJ homolog subfamily 100.0 5.9E-38 2E-42 272.0 32.8 308 2-326 32-366 (450)
5 3hym_B Cell division cycle pro 100.0 4.5E-37 1.5E-41 255.4 28.2 287 40-329 23-310 (330)
6 2xpi_A Anaphase-promoting comp 100.0 5.3E-37 1.8E-41 275.3 30.0 310 3-328 279-589 (597)
7 3hym_B Cell division cycle pro 100.0 3.5E-36 1.2E-40 250.0 32.4 284 2-306 28-322 (330)
8 2y4t_A DNAJ homolog subfamily 100.0 2.9E-36 9.9E-41 261.3 32.9 304 2-323 66-415 (450)
9 1fch_A Peroxisomal targeting s 100.0 1E-36 3.4E-41 257.3 23.9 297 5-319 34-360 (368)
10 3fp2_A TPR repeat-containing p 100.0 1.5E-35 5.1E-40 262.5 31.3 311 2-326 65-499 (537)
11 3ieg_A DNAJ homolog subfamily 100.0 9.2E-35 3.2E-39 244.1 34.5 284 2-303 43-354 (359)
12 4g1t_A Interferon-induced prot 100.0 6.4E-36 2.2E-40 260.8 26.3 318 3-327 101-468 (472)
13 2gw1_A Mitochondrial precursor 100.0 1.2E-35 4.2E-40 261.5 25.1 234 89-326 202-486 (514)
14 2gw1_A Mitochondrial precursor 100.0 2.8E-35 9.5E-40 259.3 25.6 249 40-298 238-492 (514)
15 2xpi_A Anaphase-promoting comp 100.0 9.8E-35 3.4E-39 260.5 29.0 305 2-328 206-555 (597)
16 3fp2_A TPR repeat-containing p 100.0 3.6E-35 1.2E-39 260.0 24.2 304 2-327 31-466 (537)
17 4eqf_A PEX5-related protein; a 100.0 1.2E-34 4E-39 244.4 25.7 265 40-316 66-354 (365)
18 4g1t_A Interferon-induced prot 100.0 1.5E-33 5E-38 245.9 29.7 311 2-322 57-405 (472)
19 3cv0_A Peroxisome targeting si 100.0 2.8E-34 9.7E-39 238.2 23.6 273 40-324 22-321 (327)
20 2h6f_A Protein farnesyltransfe 100.0 3.2E-33 1.1E-37 234.1 27.0 251 39-302 97-366 (382)
21 1fch_A Peroxisomal targeting s 100.0 1.7E-34 5.7E-39 243.7 19.4 265 48-322 34-318 (368)
22 4eqf_A PEX5-related protein; a 100.0 2E-33 6.8E-38 236.9 24.3 270 2-283 71-355 (365)
23 2h6f_A Protein farnesyltransfe 100.0 6.3E-34 2.1E-38 238.4 20.1 252 65-329 89-359 (382)
24 3cv0_A Peroxisome targeting si 100.0 1.4E-32 4.8E-37 228.0 23.5 274 2-287 27-318 (327)
25 2pl2_A Hypothetical conserved 100.0 4E-32 1.4E-36 211.5 23.4 200 107-316 2-212 (217)
26 3u4t_A TPR repeat-containing p 100.0 1.3E-31 4.6E-36 216.3 22.4 257 41-302 5-268 (272)
27 3sf4_A G-protein-signaling mod 100.0 5.1E-31 1.7E-35 225.2 26.4 304 2-313 15-371 (406)
28 3uq3_A Heat shock protein STI1 100.0 7.2E-31 2.5E-35 210.2 25.4 238 40-298 6-256 (258)
29 3u4t_A TPR repeat-containing p 100.0 2.4E-31 8.2E-36 214.8 20.3 241 79-329 6-261 (272)
30 2pl2_A Hypothetical conserved 100.0 4.5E-31 1.5E-35 205.5 20.8 185 87-281 16-211 (217)
31 3uq3_A Heat shock protein STI1 100.0 2.2E-30 7.6E-35 207.3 23.6 230 79-326 8-250 (258)
32 3mkr_A Coatomer subunit epsilo 100.0 1.2E-29 4.2E-34 205.9 27.2 260 46-325 6-271 (291)
33 3mkr_A Coatomer subunit epsilo 100.0 2.1E-29 7E-34 204.6 27.4 263 3-293 6-273 (291)
34 4a1s_A PINS, partner of inscut 100.0 1.2E-30 4.2E-35 223.3 21.0 281 38-321 47-375 (411)
35 3sf4_A G-protein-signaling mod 100.0 3.8E-30 1.3E-34 219.8 22.7 280 40-322 10-340 (406)
36 3ro2_A PINS homolog, G-protein 100.0 3.9E-30 1.3E-34 213.9 21.5 280 40-322 6-336 (338)
37 3ro2_A PINS homolog, G-protein 100.0 4.7E-29 1.6E-33 207.3 23.9 279 2-288 11-336 (338)
38 4a1s_A PINS, partner of inscut 100.0 5.1E-29 1.7E-33 213.3 24.2 280 2-289 54-377 (411)
39 2q7f_A YRRB protein; TPR, prot 100.0 1.3E-28 4.5E-33 195.3 21.2 215 79-302 26-240 (243)
40 1xnf_A Lipoprotein NLPI; TPR, 100.0 2.4E-28 8.3E-33 197.4 22.6 255 45-312 11-269 (275)
41 3vtx_A MAMA; tetratricopeptide 100.0 7.1E-28 2.4E-32 182.8 22.8 174 108-290 3-176 (184)
42 2ho1_A Type 4 fimbrial biogene 100.0 8.8E-28 3E-32 191.7 23.4 205 110-323 37-243 (252)
43 4abn_A Tetratricopeptide repea 100.0 1.4E-28 4.6E-33 213.5 20.1 215 90-314 82-317 (474)
44 2q7f_A YRRB protein; TPR, prot 100.0 2.1E-28 7.1E-33 194.2 19.0 212 109-329 22-233 (243)
45 2ond_A Cleavage stimulation fa 100.0 1.1E-26 3.7E-31 190.8 29.4 222 93-323 33-275 (308)
46 2vq2_A PILW, putative fimbrial 100.0 2.7E-27 9.2E-32 185.4 24.4 197 88-293 20-220 (225)
47 3ulq_A Response regulator aspa 100.0 1.6E-27 5.4E-32 202.1 24.5 308 5-322 21-372 (383)
48 3vtx_A MAMA; tetratricopeptide 100.0 4.9E-28 1.7E-32 183.7 18.3 174 142-324 3-176 (184)
49 2ho1_A Type 4 fimbrial biogene 100.0 9.9E-27 3.4E-31 185.6 26.0 208 79-295 40-249 (252)
50 1xnf_A Lipoprotein NLPI; TPR, 100.0 2.3E-27 7.7E-32 191.7 22.5 232 84-326 13-252 (275)
51 1ouv_A Conserved hypothetical 100.0 4E-26 1.4E-30 184.3 29.6 218 86-324 16-257 (273)
52 2vq2_A PILW, putative fimbrial 100.0 4.4E-26 1.5E-30 178.4 27.9 211 106-325 4-218 (225)
53 4abn_A Tetratricopeptide repea 100.0 3.2E-27 1.1E-31 204.9 22.8 215 54-281 83-318 (474)
54 2ond_A Cleavage stimulation fa 100.0 2.5E-26 8.6E-31 188.6 26.7 253 56-328 33-302 (308)
55 1ouv_A Conserved hypothetical 100.0 1.6E-25 5.4E-30 180.8 29.2 229 40-292 7-259 (273)
56 2ooe_A Cleavage stimulation fa 100.0 2E-25 6.7E-30 197.1 32.0 298 7-324 23-460 (530)
57 2xm6_A Protein corresponding t 100.0 7.2E-25 2.5E-29 191.7 33.7 211 90-321 201-435 (490)
58 4gyw_A UDP-N-acetylglucosamine 100.0 9E-27 3.1E-31 209.5 20.6 174 105-287 4-177 (723)
59 2xm6_A Protein corresponding t 99.9 1.8E-24 6.2E-29 189.1 34.6 256 41-319 113-397 (490)
60 4i17_A Hypothetical protein; T 99.9 5.4E-26 1.9E-30 178.5 22.2 207 79-301 10-226 (228)
61 3ulq_A Response regulator aspa 99.9 5.8E-26 2E-30 192.5 22.5 237 40-286 104-370 (383)
62 4gyw_A UDP-N-acetylglucosamine 99.9 2E-26 6.8E-31 207.3 20.0 175 139-322 4-178 (723)
63 3q15_A PSP28, response regulat 99.9 3.4E-25 1.2E-29 187.3 25.6 304 7-319 23-366 (378)
64 2ooe_A Cleavage stimulation fa 99.9 2.5E-25 8.5E-30 196.5 25.5 222 93-323 255-497 (530)
65 3nf1_A KLC 1, kinesin light ch 99.9 1.1E-25 3.8E-30 185.1 20.0 246 33-287 21-310 (311)
66 4i17_A Hypothetical protein; T 99.9 7.3E-25 2.5E-29 172.0 21.3 208 40-266 8-225 (228)
67 3nf1_A KLC 1, kinesin light ch 99.9 3.6E-26 1.2E-30 188.0 14.2 250 72-321 23-310 (311)
68 3qky_A Outer membrane assembly 99.9 7E-25 2.4E-29 175.8 20.0 200 104-309 9-252 (261)
69 3q15_A PSP28, response regulat 99.9 3.4E-24 1.2E-28 181.2 23.6 237 39-285 101-366 (378)
70 1qqe_A Vesicular transport pro 99.9 2.7E-24 9.2E-29 175.1 20.3 225 54-299 32-284 (292)
71 3e4b_A ALGK; tetratricopeptide 99.9 3.7E-24 1.3E-28 184.6 22.1 281 3-318 10-351 (452)
72 3urz_A Uncharacterized protein 99.9 4.2E-24 1.4E-28 164.9 19.7 179 109-298 3-199 (208)
73 3dra_A Protein farnesyltransfe 99.9 2E-23 6.8E-28 168.2 23.8 247 43-298 36-302 (306)
74 3dra_A Protein farnesyltransfe 99.9 9.8E-23 3.3E-27 164.2 27.6 228 90-326 47-296 (306)
75 1hz4_A MALT regulatory protein 99.9 1E-22 3.5E-27 171.9 28.9 278 2-286 20-324 (373)
76 4ga2_A E3 SUMO-protein ligase 99.9 8.1E-25 2.8E-29 159.6 12.8 147 81-227 2-149 (150)
77 2pzi_A Probable serine/threoni 99.9 1.7E-24 5.8E-29 195.8 17.1 199 105-316 389-596 (681)
78 1qqe_A Vesicular transport pro 99.9 3.9E-24 1.3E-28 174.1 17.5 217 91-324 32-275 (292)
79 3qky_A Outer membrane assembly 99.9 8.5E-24 2.9E-28 169.5 19.2 213 40-275 16-252 (261)
80 2pzi_A Probable serine/threoni 99.9 4.4E-24 1.5E-28 193.1 18.7 188 67-270 388-583 (681)
81 1hz4_A MALT regulatory protein 99.9 9.1E-23 3.1E-27 172.2 25.3 277 40-321 15-325 (373)
82 3edt_B KLC 2, kinesin light ch 99.9 3.9E-24 1.3E-28 173.2 15.6 232 88-319 13-282 (283)
83 3e4b_A ALGK; tetratricopeptide 99.9 8.6E-23 2.9E-27 176.1 23.7 281 3-320 42-389 (452)
84 3edt_B KLC 2, kinesin light ch 99.9 5.3E-23 1.8E-27 166.5 20.2 234 7-241 12-281 (283)
85 3as5_A MAMA; tetratricopeptide 99.9 8.3E-23 2.8E-27 154.7 19.1 168 111-287 9-176 (186)
86 3urz_A Uncharacterized protein 99.9 5.7E-23 1.9E-27 158.6 18.3 183 40-244 5-189 (208)
87 4ga2_A E3 SUMO-protein ligase 99.9 3.4E-24 1.2E-28 156.3 10.2 147 115-270 2-149 (150)
88 3as5_A MAMA; tetratricopeptide 99.9 8.4E-23 2.9E-27 154.7 17.7 174 143-325 7-180 (186)
89 3dss_A Geranylgeranyl transfer 99.9 5.7E-20 2E-24 148.8 30.9 241 48-297 38-317 (331)
90 2yhc_A BAMD, UPF0169 lipoprote 99.9 1.4E-21 4.9E-26 152.7 21.0 190 110-325 4-220 (225)
91 3dss_A Geranylgeranyl transfer 99.9 7.2E-21 2.5E-25 154.0 23.7 225 90-323 43-309 (331)
92 4gco_A Protein STI-1; structur 99.9 8.8E-22 3E-26 138.7 14.4 122 101-222 4-125 (126)
93 2yhc_A BAMD, UPF0169 lipoprote 99.9 2.7E-21 9.2E-26 151.2 18.4 155 143-323 3-181 (225)
94 2r5s_A Uncharacterized protein 99.9 8.3E-22 2.8E-26 148.0 13.8 169 107-283 3-172 (176)
95 2ifu_A Gamma-SNAP; membrane fu 99.9 5.4E-21 1.8E-25 156.7 19.6 240 51-322 3-267 (307)
96 3q7a_A Farnesyltransferase alp 99.9 3.3E-20 1.1E-24 150.7 22.7 224 89-321 67-335 (349)
97 3qou_A Protein YBBN; thioredox 99.9 1.3E-20 4.4E-25 152.7 19.7 172 105-283 112-283 (287)
98 2r5s_A Uncharacterized protein 99.9 1.9E-21 6.5E-26 146.0 12.3 167 141-317 3-172 (176)
99 3q7a_A Farnesyltransferase alp 99.9 1.9E-19 6.4E-24 146.3 24.8 256 40-298 55-346 (349)
100 4gco_A Protein STI-1; structur 99.9 6.5E-21 2.2E-25 134.2 14.2 122 135-265 4-125 (126)
101 3qou_A Protein YBBN; thioredox 99.9 2.4E-20 8.3E-25 151.1 19.0 170 139-317 112-283 (287)
102 1xi4_A Clathrin heavy chain; a 99.9 1.1E-19 3.6E-24 167.9 24.5 262 3-326 1056-1317(1630)
103 2ifu_A Gamma-SNAP; membrane fu 99.9 4.2E-20 1.4E-24 151.4 19.5 202 8-211 3-227 (307)
104 2vsy_A XCC0866; transferase, g 99.9 1.3E-20 4.5E-25 167.7 17.3 155 90-244 3-160 (568)
105 2vsy_A XCC0866; transferase, g 99.9 2E-20 6.7E-25 166.6 17.2 165 123-296 2-169 (568)
106 4f3v_A ESX-1 secretion system 99.8 4.7E-21 1.6E-25 150.7 11.0 190 89-287 19-240 (282)
107 3gyz_A Chaperone protein IPGC; 99.8 7.5E-21 2.6E-25 137.7 11.2 118 95-212 21-138 (151)
108 4f3v_A ESX-1 secretion system 99.8 3E-20 1E-24 146.2 14.5 207 113-329 10-247 (282)
109 3gyz_A Chaperone protein IPGC; 99.8 4.4E-21 1.5E-25 138.9 8.9 116 129-244 21-136 (151)
110 1b89_A Protein (clathrin heavy 99.8 5.3E-22 1.8E-26 164.8 4.3 270 5-329 12-288 (449)
111 3rjv_A Putative SEL1 repeat pr 99.8 3.2E-19 1.1E-23 137.8 19.6 187 93-298 3-209 (212)
112 1p5q_A FKBP52, FK506-binding p 99.8 4.2E-22 1.4E-26 165.0 3.1 152 123-283 126-293 (336)
113 1p5q_A FKBP52, FK506-binding p 99.8 6.2E-22 2.1E-26 164.0 3.6 187 50-241 76-294 (336)
114 1xi4_A Clathrin heavy chain; a 99.8 9.4E-19 3.2E-23 161.7 24.4 240 40-311 1106-1377(1630)
115 2c2l_A CHIP, carboxy terminus 99.8 3.7E-20 1.3E-24 149.5 12.9 200 107-320 1-201 (281)
116 1b89_A Protein (clathrin heavy 99.8 3.9E-21 1.3E-25 159.6 7.3 264 2-315 38-308 (449)
117 2vgx_A Chaperone SYCD; alterna 99.8 3.8E-20 1.3E-24 134.3 11.1 120 96-215 7-126 (148)
118 2xcb_A PCRH, regulatory protei 99.8 2.8E-19 9.7E-24 129.0 12.3 125 97-221 5-129 (142)
119 3rjv_A Putative SEL1 repeat pr 99.8 1.2E-18 4.1E-23 134.6 16.4 179 127-320 3-199 (212)
120 2vgx_A Chaperone SYCD; alterna 99.8 8.6E-19 2.9E-23 127.1 13.6 116 129-244 6-121 (148)
121 1dce_A Protein (RAB geranylger 99.8 1.3E-18 4.5E-23 153.0 16.7 202 92-322 45-271 (567)
122 2qfc_A PLCR protein; TPR, HTH, 99.8 1.9E-17 6.4E-22 134.8 22.2 177 106-285 71-267 (293)
123 2fo7_A Synthetic consensus TPR 99.8 6.9E-18 2.3E-22 120.4 17.4 134 111-244 2-135 (136)
124 2fo7_A Synthetic consensus TPR 99.8 1.3E-17 4.4E-22 118.9 17.7 134 145-287 2-135 (136)
125 2c2l_A CHIP, carboxy terminus 99.8 6.9E-19 2.4E-23 142.0 11.4 188 83-284 11-199 (281)
126 2xcb_A PCRH, regulatory protei 99.8 1.7E-18 5.8E-23 124.9 11.7 114 131-244 5-118 (142)
127 1dce_A Protein (RAB geranylger 99.8 1.1E-18 3.6E-23 153.6 12.6 210 46-287 35-270 (567)
128 3upv_A Heat shock protein STI1 99.8 1.1E-17 3.9E-22 118.0 15.3 118 107-224 1-124 (126)
129 3u3w_A Transcriptional activat 99.8 3.1E-17 1.1E-21 133.5 20.0 169 113-284 78-266 (293)
130 3mv2_B Coatomer subunit epsilo 99.8 3.1E-16 1.1E-20 125.0 24.8 250 46-325 20-289 (310)
131 2e2e_A Formate-dependent nitri 99.8 5.6E-18 1.9E-22 127.2 13.3 130 86-215 20-152 (177)
132 2qfc_A PLCR protein; TPR, HTH, 99.8 7.6E-17 2.6E-21 131.2 20.5 177 140-319 71-267 (293)
133 2fbn_A 70 kDa peptidylprolyl i 99.8 1.7E-18 5.7E-23 132.5 10.0 127 118-244 12-154 (198)
134 3mv2_B Coatomer subunit epsilo 99.8 1.1E-16 3.7E-21 127.6 20.6 256 5-295 22-293 (310)
135 1hh8_A P67PHOX, NCF-2, neutrop 99.8 6.6E-17 2.2E-21 125.1 18.8 143 145-290 7-156 (213)
136 1a17_A Serine/threonine protei 99.8 4.7E-17 1.6E-21 120.6 17.0 135 110-244 13-149 (166)
137 3upv_A Heat shock protein STI1 99.8 2.8E-17 9.5E-22 115.9 14.7 112 179-299 5-122 (126)
138 1hh8_A P67PHOX, NCF-2, neutrop 99.8 5.3E-17 1.8E-21 125.6 17.3 131 111-244 7-153 (213)
139 2fbn_A 70 kDa peptidylprolyl i 99.8 2.9E-18 1E-22 131.2 9.3 151 89-239 17-184 (198)
140 2lni_A Stress-induced-phosphop 99.7 5.3E-17 1.8E-21 115.5 14.8 122 106-227 12-133 (133)
141 2e2e_A Formate-dependent nitri 99.7 2E-17 7E-22 124.1 12.9 124 121-244 21-147 (177)
142 2vyi_A SGTA protein; chaperone 99.7 4.9E-17 1.7E-21 115.3 14.0 123 106-228 8-130 (131)
143 3sz7_A HSC70 cochaperone (SGT) 99.7 5.1E-17 1.8E-21 120.2 14.2 116 106-221 7-122 (164)
144 3u3w_A Transcriptional activat 99.7 1.4E-16 4.7E-21 129.6 18.0 162 83-244 82-269 (293)
145 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 4.5E-18 1.5E-22 146.7 9.5 152 89-240 247-414 (457)
146 4e6h_A MRNA 3'-END-processing 99.7 1.3E-15 4.6E-20 135.8 25.2 223 93-324 326-576 (679)
147 1a17_A Serine/threonine protei 99.7 1.6E-16 5.5E-21 117.7 16.3 133 143-284 12-146 (166)
148 3gw4_A Uncharacterized protein 99.7 1.5E-16 5.1E-21 122.0 16.2 138 144-284 26-176 (203)
149 3gw4_A Uncharacterized protein 99.7 8E-17 2.8E-21 123.5 14.7 157 88-244 4-179 (203)
150 4gcn_A Protein STI-1; structur 99.7 1.6E-16 5.4E-21 111.9 14.6 115 178-295 8-122 (127)
151 2lni_A Stress-induced-phosphop 99.7 1.7E-16 5.8E-21 112.8 15.0 122 140-270 12-133 (133)
152 4gcn_A Protein STI-1; structur 99.7 1.6E-16 5.4E-21 112.0 14.3 100 145-244 9-115 (127)
153 2vyi_A SGTA protein; chaperone 99.7 2E-16 6.8E-21 112.1 14.3 124 139-271 7-130 (131)
154 3q49_B STIP1 homology and U bo 99.7 2.7E-16 9.2E-21 112.5 14.9 121 105-225 4-129 (137)
155 3sz7_A HSC70 cochaperone (SGT) 99.7 2.2E-16 7.6E-21 116.8 14.4 116 140-264 7-122 (164)
156 1hxi_A PEX5, peroxisome target 99.7 2.1E-16 7.3E-21 110.2 13.3 101 112-212 19-119 (121)
157 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 1.1E-17 3.9E-22 144.2 8.3 147 122-277 246-407 (457)
158 1na0_A Designed protein CTPR3; 99.7 6.9E-16 2.4E-20 108.3 16.2 121 106-226 4-125 (125)
159 2hr2_A Hypothetical protein; a 99.7 6.7E-17 2.3E-21 115.3 9.6 103 110-212 11-136 (159)
160 3rkv_A Putative peptidylprolyl 99.7 3.7E-16 1.3E-20 115.3 14.0 119 109-227 10-147 (162)
161 1elw_A TPR1-domain of HOP; HOP 99.7 1.6E-15 5.5E-20 105.2 16.4 114 109-222 3-116 (118)
162 1na0_A Designed protein CTPR3; 99.7 2.7E-15 9.1E-20 105.2 16.1 121 140-269 4-125 (125)
163 3rkv_A Putative peptidylprolyl 99.7 7.1E-16 2.4E-20 113.8 12.7 116 180-304 13-147 (162)
164 3q49_B STIP1 homology and U bo 99.7 1.5E-15 5.2E-20 108.6 14.1 105 140-244 5-109 (137)
165 4b4t_Q 26S proteasome regulato 99.7 8.5E-14 2.9E-18 119.7 27.6 206 2-207 10-245 (434)
166 4e6h_A MRNA 3'-END-processing 99.7 3.1E-14 1.1E-18 127.0 25.2 229 56-293 326-579 (679)
167 2hr2_A Hypothetical protein; a 99.7 8.5E-16 2.9E-20 109.6 12.2 103 143-245 10-135 (159)
168 2dba_A Smooth muscle cell asso 99.7 2.8E-15 9.6E-20 108.6 15.4 120 105-224 23-145 (148)
169 1wao_1 Serine/threonine protei 99.7 5.5E-17 1.9E-21 140.5 7.3 122 81-202 11-134 (477)
170 1hxi_A PEX5, peroxisome target 99.7 8.3E-16 2.8E-20 107.2 11.6 97 147-243 20-116 (121)
171 1elw_A TPR1-domain of HOP; HOP 99.7 5E-15 1.7E-19 102.7 14.8 111 179-298 5-115 (118)
172 4b4t_Q 26S proteasome regulato 99.7 2.6E-15 8.8E-20 129.2 15.6 190 89-281 17-242 (434)
173 2dba_A Smooth muscle cell asso 99.6 6.5E-15 2.2E-19 106.7 15.2 118 174-300 24-144 (148)
174 2xev_A YBGF; tetratricopeptide 99.6 5.2E-15 1.8E-19 104.6 14.0 113 112-224 4-122 (129)
175 2if4_A ATFKBP42; FKBP-like, al 99.6 3.5E-16 1.2E-20 129.5 9.0 134 111-244 180-331 (338)
176 1elr_A TPR2A-domain of HOP; HO 99.6 3.5E-15 1.2E-19 105.6 12.4 116 109-225 3-125 (131)
177 1wao_1 Serine/threonine protei 99.6 7.9E-16 2.7E-20 133.2 10.6 126 41-169 8-135 (477)
178 2kck_A TPR repeat; tetratricop 99.6 1.5E-15 5.3E-20 104.3 10.0 105 106-210 2-109 (112)
179 1zu2_A Mitochondrial import re 99.6 2.4E-15 8.3E-20 107.0 11.0 99 90-212 16-125 (158)
180 3ro3_A PINS homolog, G-protein 99.6 5.7E-15 2E-19 108.7 13.6 104 180-286 51-160 (164)
181 2xev_A YBGF; tetratricopeptide 99.6 9.1E-15 3.1E-19 103.3 13.9 115 181-301 5-122 (129)
182 1zu2_A Mitochondrial import re 99.6 2E-15 6.9E-20 107.4 10.2 103 50-178 13-125 (158)
183 2if4_A ATFKBP42; FKBP-like, al 99.6 2.3E-15 8E-20 124.6 12.3 153 41-213 181-334 (338)
184 1ihg_A Cyclophilin 40; ppiase 99.6 8.3E-15 2.8E-19 122.5 15.6 125 110-234 223-363 (370)
185 1elr_A TPR2A-domain of HOP; HO 99.6 1.2E-14 4.2E-19 102.7 13.5 118 142-269 2-126 (131)
186 3k9i_A BH0479 protein; putativ 99.6 1.8E-15 6.1E-20 105.0 8.1 90 124-213 4-96 (117)
187 2kck_A TPR repeat; tetratricop 99.6 5.3E-15 1.8E-19 101.6 10.1 107 208-323 2-111 (112)
188 1ihg_A Cyclophilin 40; ppiase 99.6 2.5E-14 8.6E-19 119.6 16.1 140 40-200 224-363 (370)
189 3k9i_A BH0479 protein; putativ 99.6 5.1E-15 1.8E-19 102.7 9.9 107 191-306 3-112 (117)
190 3ro3_A PINS homolog, G-protein 99.6 3.3E-14 1.1E-18 104.5 14.0 135 110-244 9-161 (164)
191 2uy1_A Cleavage stimulation fa 99.5 1.7E-11 5.7E-16 106.4 28.4 281 10-317 28-412 (493)
192 2uy1_A Cleavage stimulation fa 99.5 4.1E-12 1.4E-16 110.2 23.5 183 8-220 6-254 (493)
193 2kat_A Uncharacterized protein 99.4 2.4E-12 8.4E-17 88.7 12.7 82 94-175 3-84 (115)
194 2kat_A Uncharacterized protein 99.4 1.1E-12 3.8E-17 90.5 10.7 85 127-211 2-86 (115)
195 2l6j_A TPR repeat-containing p 99.4 1.5E-13 5.2E-18 94.1 6.1 93 110-202 4-102 (111)
196 2l6j_A TPR repeat-containing p 99.4 8.8E-13 3E-17 90.2 9.7 96 211-315 3-104 (111)
197 1na3_A Designed protein CTPR2; 99.4 4.5E-12 1.5E-16 83.2 11.7 83 109-191 8-90 (91)
198 1na3_A Designed protein CTPR2; 99.4 5.4E-12 1.8E-16 82.8 11.0 85 142-226 7-91 (91)
199 3n71_A Histone lysine methyltr 99.4 1.2E-11 4E-16 106.5 14.3 127 116-242 315-465 (490)
200 1klx_A Cysteine rich protein B 99.3 7.5E-11 2.6E-15 83.9 14.0 111 90-208 9-127 (138)
201 3n71_A Histone lysine methyltr 99.3 4.6E-11 1.6E-15 102.8 15.2 120 88-207 321-464 (490)
202 2kc7_A BFR218_protein; tetratr 99.3 7.7E-12 2.6E-16 83.6 8.1 89 114-210 4-93 (99)
203 3ma5_A Tetratricopeptide repea 99.3 1.8E-11 6.3E-16 81.8 9.8 69 140-208 3-71 (100)
204 3ma5_A Tetratricopeptide repea 99.3 2.3E-11 7.9E-16 81.3 10.0 86 105-190 2-89 (100)
205 1klx_A Cysteine rich protein B 99.3 1.3E-10 4.4E-15 82.6 12.9 111 124-242 9-127 (138)
206 2kc7_A BFR218_protein; tetratr 99.2 2.9E-11 1E-15 80.7 7.8 89 148-244 4-93 (99)
207 3ly7_A Transcriptional activat 99.2 1.2E-09 4.1E-14 88.8 17.8 142 102-244 186-342 (372)
208 3u64_A Protein TP_0956; tetrat 99.2 1.2E-09 4.2E-14 85.1 16.6 109 171-287 145-272 (301)
209 3ly7_A Transcriptional activat 99.2 2.5E-09 8.6E-14 86.9 17.5 146 135-290 185-345 (372)
210 3u64_A Protein TP_0956; tetrat 99.1 6.2E-09 2.1E-13 81.1 16.9 106 139-244 147-272 (301)
211 3bee_A Putative YFRE protein; 99.0 4.9E-09 1.7E-13 68.3 11.1 72 106-177 2-76 (93)
212 4g26_A Pentatricopeptide repea 99.0 2.8E-07 9.6E-12 80.0 24.9 159 82-241 32-204 (501)
213 1pc2_A Mitochondria fission pr 99.0 9.1E-09 3.1E-13 72.4 12.7 96 90-185 12-112 (152)
214 1pc2_A Mitochondria fission pr 99.0 1.1E-08 3.6E-13 72.1 12.2 100 193-300 13-116 (152)
215 3bee_A Putative YFRE protein; 99.0 6.3E-09 2.1E-13 67.8 9.8 72 140-211 2-76 (93)
216 3qww_A SET and MYND domain-con 98.9 6.3E-09 2.2E-13 88.1 11.2 62 180-241 342-411 (433)
217 4g26_A Pentatricopeptide repea 98.9 6.9E-07 2.4E-11 77.6 23.8 173 112-292 28-214 (501)
218 3qwp_A SET and MYND domain-con 98.9 1.1E-08 3.9E-13 86.8 12.1 106 118-223 295-424 (429)
219 3qwp_A SET and MYND domain-con 98.9 1.7E-08 5.9E-13 85.7 12.7 117 151-268 294-426 (429)
220 3qww_A SET and MYND domain-con 98.9 2E-08 6.9E-13 85.1 12.9 84 124-207 312-411 (433)
221 2v5f_A Prolyl 4-hydroxylase su 98.8 7E-08 2.4E-12 64.6 11.3 86 211-298 4-89 (104)
222 2v5f_A Prolyl 4-hydroxylase su 98.8 7.2E-08 2.5E-12 64.5 11.3 76 110-185 5-87 (104)
223 4h7y_A Dual specificity protei 98.5 4.6E-06 1.6E-10 57.6 13.1 55 190-244 72-126 (161)
224 1nzn_A CGI-135 protein, fissio 98.5 5.1E-06 1.8E-10 56.2 13.1 102 191-300 14-119 (126)
225 1nzn_A CGI-135 protein, fissio 98.5 3.2E-06 1.1E-10 57.2 11.8 94 91-184 16-114 (126)
226 4h7y_A Dual specificity protei 98.5 1.3E-05 4.4E-10 55.5 14.2 109 105-214 8-130 (161)
227 3ffl_A Anaphase-promoting comp 98.3 9.8E-06 3.4E-10 57.4 9.8 132 112-265 22-165 (167)
228 3ffl_A Anaphase-promoting comp 98.2 2.8E-05 9.5E-10 55.1 11.0 126 84-222 28-165 (167)
229 3o48_A Mitochondria fission 1 97.9 0.0007 2.4E-08 46.0 12.9 82 211-300 39-123 (134)
230 3o48_A Mitochondria fission 1 97.9 0.00072 2.5E-08 45.9 12.6 77 109-185 39-119 (134)
231 1y8m_A FIS1; mitochondria, unk 97.8 0.0015 5.1E-08 45.0 13.6 77 107-183 36-116 (144)
232 1y8m_A FIS1; mitochondria, unk 97.8 0.0012 4E-08 45.5 13.0 84 209-300 36-122 (144)
233 3txn_A 26S proteasome regulato 97.8 0.003 1E-07 52.5 17.4 191 111-304 20-235 (394)
234 3txn_A 26S proteasome regulato 97.7 0.016 5.5E-07 48.2 26.1 168 40-207 20-210 (394)
235 4gns_B Protein CSD3, chitin bi 97.7 0.0012 4.3E-08 59.4 15.1 119 51-170 260-397 (754)
236 1qsa_A Protein (soluble lytic 97.6 0.029 9.9E-07 49.8 21.6 242 62-317 58-347 (618)
237 4gns_B Protein CSD3, chitin bi 97.5 0.0026 8.9E-08 57.4 14.0 115 89-204 261-397 (754)
238 4b4t_P 26S proteasome regulato 97.4 0.045 1.5E-06 46.7 22.4 194 9-207 29-247 (445)
239 3mkq_A Coatomer beta'-subunit; 97.2 0.019 6.6E-07 53.1 17.0 100 47-170 607-707 (814)
240 3mkq_A Coatomer beta'-subunit; 97.2 0.013 4.4E-07 54.3 15.7 126 89-235 612-746 (814)
241 3kae_A CDC27, possible protein 97.1 0.043 1.5E-06 38.9 15.4 116 90-213 16-149 (242)
242 3mkq_B Coatomer subunit alpha; 96.8 0.072 2.5E-06 38.5 13.0 100 155-281 16-115 (177)
243 3mkq_B Coatomer subunit alpha; 96.7 0.095 3.3E-06 37.9 13.7 98 121-236 16-113 (177)
244 4ady_A RPN2, 26S proteasome re 96.7 0.38 1.3E-05 44.7 22.8 258 9-283 387-657 (963)
245 1zbp_A Hypothetical protein VP 96.7 0.074 2.5E-06 41.2 13.4 58 121-178 8-65 (273)
246 3kae_A CDC27, possible protein 96.7 0.092 3.1E-06 37.3 19.4 120 50-180 13-150 (242)
247 3spa_A Mtrpol, DNA-directed RN 96.7 0.036 1.2E-06 51.6 13.6 96 180-283 129-229 (1134)
248 1zbp_A Hypothetical protein VP 96.7 0.13 4.3E-06 39.9 14.6 60 86-145 7-66 (273)
249 3spa_A Mtrpol, DNA-directed RN 96.7 0.043 1.5E-06 51.1 13.9 98 110-207 127-230 (1134)
250 4b4t_R RPN7, 26S proteasome re 96.5 0.015 5.3E-07 49.3 9.8 98 144-241 131-237 (429)
251 4fhn_B Nucleoporin NUP120; pro 96.4 0.23 7.7E-06 48.0 18.1 145 115-273 817-989 (1139)
252 2ff4_A Probable regulatory pro 96.4 0.092 3.1E-06 43.9 13.8 112 117-241 122-234 (388)
253 1ya0_A SMG-7 transcript varian 96.4 0.039 1.3E-06 47.5 11.4 75 114-188 156-230 (497)
254 2ff4_A Probable regulatory pro 96.4 0.073 2.5E-06 44.5 12.8 105 89-206 128-233 (388)
255 1ya0_A SMG-7 transcript varian 96.4 0.039 1.3E-06 47.5 11.1 66 90-155 166-231 (497)
256 4b4t_P 26S proteasome regulato 96.3 0.43 1.5E-05 40.6 21.5 104 179-284 138-247 (445)
257 4b4t_S RPN3, 26S proteasome re 96.1 0.15 5.1E-06 43.7 13.3 124 86-211 146-303 (523)
258 4b4t_R RPN7, 26S proteasome re 96.0 0.036 1.2E-06 47.1 9.0 99 109-207 130-237 (429)
259 4b4t_S RPN3, 26S proteasome re 95.6 0.09 3.1E-06 45.1 9.9 130 154-287 146-302 (523)
260 1qsa_A Protein (soluble lytic 95.4 1.3 4.5E-05 39.4 28.9 189 117-309 221-433 (618)
261 4ady_A RPN2, 26S proteasome re 95.4 1.4 4.6E-05 41.2 17.2 185 89-283 387-588 (963)
262 4fhn_B Nucleoporin NUP120; pro 95.2 0.67 2.3E-05 44.9 15.7 101 104-204 836-964 (1139)
263 3lpz_A GET4 (YOR164C homolog); 92.1 4 0.00014 33.0 27.1 96 209-304 183-297 (336)
264 2wpv_A GET4, UPF0363 protein Y 89.1 7.5 0.00026 31.1 24.4 33 209-241 184-217 (312)
265 4gq2_M Nucleoporin NUP120; bet 87.3 11 0.00037 35.7 13.2 90 150-243 816-928 (950)
266 3lvg_A Clathrin heavy chain 1; 86.3 1.5E-06 5.2E-11 72.4 -28.9 193 40-267 55-275 (624)
267 4gq2_M Nucleoporin NUP120; bet 85.8 16 0.00055 34.6 13.4 88 116-207 816-926 (950)
268 3ax2_A Mitochondrial import re 82.8 2.8 9.5E-05 25.1 4.5 34 42-75 20-53 (73)
269 3lvg_A Clathrin heavy chain 1; 80.2 5.5E-05 1.9E-09 63.4 -22.1 115 109-235 53-167 (624)
270 1om2_A Protein (mitochondrial 79.3 4.5 0.00016 25.6 4.8 34 42-75 23-56 (95)
271 3ax2_A Mitochondrial import re 77.1 7.8 0.00027 23.1 5.2 36 258-293 20-55 (73)
272 3t5v_B Nuclear mRNA export pro 72.4 18 0.00063 30.7 8.3 71 216-287 180-253 (455)
273 3lpz_A GET4 (YOR164C homolog); 71.4 39 0.0013 27.3 26.3 25 109-133 135-159 (336)
274 3esl_A Checkpoint serine/threo 70.3 30 0.001 25.5 12.9 48 126-173 95-144 (202)
275 2crb_A Nuclear receptor bindin 70.0 10 0.00034 23.7 4.5 22 2-23 21-42 (97)
276 1om2_A Protein (mitochondrial 69.8 12 0.00042 23.6 5.1 37 258-294 23-59 (95)
277 2w2u_A Hypothetical P60 katani 69.3 8 0.00027 23.8 4.2 25 260-284 24-48 (83)
278 2crb_A Nuclear receptor bindin 68.7 12 0.00043 23.3 4.7 28 111-138 16-43 (97)
279 2v6y_A AAA family ATPase, P60 67.9 8.3 0.00028 23.7 4.0 23 262-284 18-40 (83)
280 2wpv_A GET4, UPF0363 protein Y 67.7 46 0.0016 26.6 25.8 123 7-134 24-158 (312)
281 3re2_A Predicted protein; meni 67.6 33 0.0011 28.0 8.1 48 15-66 276-323 (472)
282 3t5v_B Nuclear mRNA export pro 66.5 25 0.00085 29.9 7.9 26 114-139 224-249 (455)
283 3u84_A Menin; MLL, JUND, ledgf 66.0 35 0.0012 28.4 8.1 48 15-66 298-345 (550)
284 4b4t_O 26S proteasome regulato 65.5 37 0.0013 28.2 8.8 84 89-172 89-197 (393)
285 3esl_A Checkpoint serine/threo 63.5 42 0.0014 24.8 13.6 67 211-285 79-145 (202)
286 3t5x_A PCI domain-containing p 63.3 18 0.00062 26.8 5.9 52 254-305 13-69 (203)
287 2rpa_A Katanin P60 ATPase-cont 63.2 7.6 0.00026 23.5 3.1 27 42-68 15-41 (78)
288 4a1g_A Mitotic checkpoint seri 63.1 36 0.0012 23.8 8.7 45 163-207 84-130 (152)
289 3t5x_A PCI domain-containing p 62.8 26 0.00088 26.0 6.6 32 112-143 16-47 (203)
290 2rpa_A Katanin P60 ATPase-cont 62.1 11 0.00037 22.8 3.6 27 113-139 15-41 (78)
291 3hdx_A SUSD homolog, SUSD supe 59.3 33 0.0011 29.4 7.6 57 12-68 156-226 (478)
292 3myv_A SUSD superfamily protei 58.8 33 0.0011 29.2 7.5 56 12-68 164-219 (454)
293 2ijq_A Hypothetical protein; s 57.9 47 0.0016 23.5 8.4 58 149-206 37-103 (161)
294 2ijq_A Hypothetical protein; s 57.8 47 0.0016 23.5 8.3 63 181-243 35-106 (161)
295 2wvi_A Mitotic checkpoint seri 57.2 49 0.0017 23.5 8.9 29 179-207 97-125 (164)
296 2w2u_A Hypothetical P60 katani 55.8 27 0.00092 21.4 4.7 19 120-138 29-47 (83)
297 3lew_A SUSD-like carbohydrate 55.4 39 0.0013 29.1 7.5 57 12-68 174-232 (495)
298 2wvi_A Mitotic checkpoint seri 54.9 54 0.0018 23.3 9.9 46 129-174 79-126 (164)
299 3snx_A SUSD homolog, putative 54.3 44 0.0015 28.5 7.5 56 13-68 161-220 (460)
300 4b4t_O 26S proteasome regulato 54.0 94 0.0032 25.8 11.7 70 213-283 128-197 (393)
301 4a1g_A Mitotic checkpoint seri 53.8 54 0.0018 22.9 11.7 49 128-176 83-133 (152)
302 3qnk_A Putative lipoprotein; a 53.5 45 0.0015 29.0 7.6 57 12-68 153-211 (517)
303 3kez_A Putative sugar binding 53.4 44 0.0015 28.5 7.4 55 13-68 171-225 (461)
304 3mcx_A SUSD superfamily protei 53.3 40 0.0014 28.9 7.2 56 12-68 176-231 (477)
305 3jq1_A SUSD superfamily protei 53.0 36 0.0012 29.2 6.8 55 12-67 154-208 (481)
306 2cfu_A SDSA1; SDS-hydrolase, l 52.4 45 0.0015 30.1 7.5 54 255-308 449-502 (658)
307 2v6y_A AAA family ATPase, P60 51.9 33 0.0011 21.0 4.7 18 121-138 22-39 (83)
308 2ynq_A ESSB; membrane protein, 50.9 62 0.0021 22.8 7.0 80 4-101 16-98 (161)
309 4a5x_A MITD1, MIT domain-conta 49.5 38 0.0013 20.9 4.7 21 118-138 24-44 (86)
310 3u84_A Menin; MLL, JUND, ledgf 46.1 1.3E+02 0.0045 25.2 9.9 44 163-206 298-346 (550)
311 1wy6_A Hypothetical protein ST 46.1 71 0.0024 22.1 14.6 54 154-207 101-154 (172)
312 4a5x_A MITD1, MIT domain-conta 45.7 30 0.001 21.4 3.8 16 8-23 28-43 (86)
313 4gq4_A Menin; tumor suppressor 45.6 1.3E+02 0.0046 25.1 9.5 83 124-221 259-352 (489)
314 3bu8_A Telomeric repeat-bindin 44.9 33 0.0011 25.5 4.4 45 261-305 120-164 (235)
315 2dl1_A Spartin; SPG20, MIT, st 43.0 34 0.0012 22.5 3.8 13 127-139 20-32 (116)
316 2v6x_A Vacuolar protein sortin 42.7 54 0.0019 20.0 4.7 18 121-138 24-41 (85)
317 1wfd_A Hypothetical protein 15 42.0 56 0.0019 20.5 4.7 18 121-138 26-43 (93)
318 3myv_A SUSD superfamily protei 41.6 96 0.0033 26.3 7.7 33 251-283 186-218 (454)
319 2cfu_A SDSA1; SDS-hydrolase, l 40.8 69 0.0023 28.9 6.9 45 114-158 453-497 (658)
320 3snx_A SUSD homolog, putative 40.7 1E+02 0.0034 26.3 7.6 34 251-284 187-220 (460)
321 3re2_A Predicted protein; meni 40.6 1.5E+02 0.0052 24.3 12.2 44 163-206 276-324 (472)
322 3jys_A SUSD superfamily protei 40.5 78 0.0027 27.3 7.0 54 14-67 163-222 (499)
323 3lew_A SUSD-like carbohydrate 39.8 1E+02 0.0035 26.6 7.6 34 251-284 199-232 (495)
324 3bu8_A Telomeric repeat-bindin 38.9 1.2E+02 0.0041 22.7 8.5 65 92-156 88-160 (235)
325 3hdx_A SUSD homolog, SUSD supe 38.7 1.1E+02 0.0038 26.1 7.7 34 251-284 193-226 (478)
326 3ph0_C ASCG; type III secretio 38.3 52 0.0018 18.3 6.2 39 91-130 21-60 (61)
327 2npm_A 14-3-3 domain containin 37.6 1.4E+02 0.0048 23.1 17.0 54 228-283 172-226 (260)
328 3kez_A Putative sugar binding 37.4 1.2E+02 0.0041 25.8 7.6 34 251-284 192-225 (461)
329 3qnk_A Putative lipoprotein; a 37.0 1.3E+02 0.0043 26.1 7.8 35 250-284 177-211 (517)
330 3mcx_A SUSD superfamily protei 36.8 1.1E+02 0.0039 26.1 7.4 53 231-284 179-231 (477)
331 2cpt_A SKD1 protein, vacuolar 36.1 63 0.0022 21.3 4.5 17 122-138 30-46 (117)
332 4gq4_A Menin; tumor suppressor 35.8 2E+02 0.0067 24.2 9.8 84 145-243 243-334 (489)
333 3i4g_A SUSD-like carbohydrate 35.3 94 0.0032 27.1 6.7 55 13-67 168-226 (528)
334 1wy6_A Hypothetical protein ST 33.8 1.2E+02 0.004 21.0 16.6 57 186-242 99-155 (172)
335 3mv2_A Coatomer subunit alpha; 33.8 1.8E+02 0.0063 23.3 11.3 100 43-146 118-243 (325)
336 3mkr_B Coatomer subunit alpha; 33.8 1.8E+02 0.0063 23.3 15.0 37 254-290 197-233 (320)
337 3iqu_A 14-3-3 protein sigma; s 33.6 1.1E+02 0.0039 23.2 6.0 55 13-67 150-204 (236)
338 2cpt_A SKD1 protein, vacuolar 32.1 75 0.0026 21.0 4.3 23 261-283 24-46 (117)
339 2qx5_A Nucleoporin NIC96; mRNA 31.7 2.9E+02 0.0099 24.9 9.6 30 181-211 539-570 (661)
340 3jq1_A SUSD superfamily protei 31.4 1.1E+02 0.0036 26.3 6.3 33 251-283 176-208 (481)
341 3bqo_A Telomeric repeat-bindin 31.1 30 0.001 25.4 2.4 45 261-305 123-167 (211)
342 2cwy_A Hypothetical protein TT 29.5 1.1E+02 0.0037 19.2 7.1 55 116-172 7-67 (94)
343 1o9d_A 14-3-3-like protein C; 27.9 2.1E+02 0.0072 22.1 14.6 29 41-69 10-38 (260)
344 1o9d_A 14-3-3-like protein C; 27.2 2.2E+02 0.0074 22.0 15.8 54 229-283 152-206 (260)
345 3uzd_A 14-3-3 protein gamma; s 26.3 2.2E+02 0.0076 21.8 14.9 55 228-283 147-202 (248)
346 2npm_A 14-3-3 domain containin 26.2 2.3E+02 0.0078 21.9 15.4 29 41-69 30-58 (260)
347 3efz_A 14-3-3 protein; 14-3-3, 25.8 1.9E+02 0.0066 22.4 6.1 48 91-138 174-225 (268)
348 2br9_A 14-3-3E, 14-3-3 protein 25.8 2.2E+02 0.0075 21.6 14.6 55 228-283 146-201 (234)
349 3ckc_A SUSD; TPR repeat, carbo 25.4 1.9E+02 0.0066 24.9 7.1 55 13-67 170-231 (527)
350 3ubw_A 14-3-3E, 14-3-3 protein 24.6 2.5E+02 0.0084 21.8 16.3 55 228-283 172-227 (261)
351 3jys_A SUSD superfamily protei 24.1 2.1E+02 0.0072 24.6 6.9 33 251-283 184-222 (499)
352 3otn_A SUSD superfamily protei 23.9 1.1E+02 0.0039 26.1 5.2 53 14-67 163-225 (482)
353 2qx5_A Nucleoporin NIC96; mRNA 23.3 4.2E+02 0.014 24.0 17.9 32 255-287 536-569 (661)
354 3ihv_A SUSD homolog; NP_813570 23.1 2E+02 0.0069 24.9 6.7 56 12-67 163-232 (535)
355 3mkr_B Coatomer subunit alpha; 22.6 3E+02 0.01 22.1 9.9 28 42-69 105-132 (320)
356 3bqo_A Telomeric repeat-bindin 22.1 65 0.0022 23.6 2.7 26 153-178 126-151 (211)
357 3i4g_A SUSD-like carbohydrate 21.9 2.4E+02 0.0083 24.5 6.9 33 251-283 194-226 (528)
358 2vkj_A TM1634; membrane protei 21.7 1.5E+02 0.0052 18.3 6.1 47 254-300 52-101 (106)
359 3efz_A 14-3-3 protein; 14-3-3, 21.6 1.5E+02 0.0051 23.0 4.8 51 55-105 175-226 (268)
360 2pm7_A Protein WEB1, protein t 21.5 3.5E+02 0.012 22.5 12.4 26 212-237 336-361 (399)
361 2oo2_A Hypothetical protein AF 21.5 1.5E+02 0.0052 18.3 3.9 51 12-65 11-61 (86)
362 3o10_A Sacsin; all-helical dom 20.9 1.9E+02 0.0064 19.7 4.9 42 10-68 4-45 (141)
363 3jq0_A SUSD superfamily protei 20.8 1.8E+02 0.0062 25.0 5.9 55 13-67 154-219 (493)
No 1
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=100.00 E-value=5.5e-42 Score=291.59 Aligned_cols=305 Identities=18% Similarity=0.191 Sum_probs=258.7
Q ss_pred hhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q psy9209 3 NKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 82 (349)
Q Consensus 3 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~ 82 (349)
+.++...|++++|+..|++++...|... .++..+|.++...|++++|+..|+++++.+|+....+..++
T Consensus 74 g~~~~~~g~~~~A~~~~~~al~~~p~~~---------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~-- 142 (388)
T 1w3b_A 74 GNVYKERGQLQEAIEHYRHALRLKPDFI---------DGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLG-- 142 (388)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHcCcchH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH--
Confidence 5566677777777777777764322211 45677777777777777777777777777777666544444
Q ss_pred HHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYY 162 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (349)
..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++
T Consensus 143 -~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~ 221 (388)
T 1w3b_A 143 -NLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDR 221 (388)
T ss_dssp -HHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTH
T ss_pred -HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHH
Confidence 4455568999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q psy9209 163 GLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKL 242 (349)
Q Consensus 163 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 242 (349)
|+..+++++...|+++.++..+|.++...|++++|+..|+++++.+|.++.++..+|.++...|++++|+..|++++...
T Consensus 222 A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 301 (388)
T 1w3b_A 222 AVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 301 (388)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 243 DTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
|. ...++..+|.++...|++++|+..++++++..|++..++..++.++...|++++|+..|+++++++|++
T Consensus 302 p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 302 PT---------HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp TT---------CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred cc---------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 88 788999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccc
Q psy9209 323 PSTRSS 328 (349)
Q Consensus 323 ~~~~~~ 328 (349)
+.++.+
T Consensus 373 ~~a~~~ 378 (388)
T 1w3b_A 373 ADAYSN 378 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 765543
No 2
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=100.00 E-value=7e-41 Score=284.82 Aligned_cols=276 Identities=19% Similarity=0.185 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
.++..+|.++...|++++|+..|++++..+|++..++..++.+ +...|++++|+..|+++++.+|+...++..+|.+
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~---~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 144 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAA---LVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNL 144 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH---HHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3566666666666666666666666666666666554443333 3334666667777766666666666666777777
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMK 199 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 199 (349)
+...|++++|+..|+++++.+|++..++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+.
T Consensus 145 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~ 224 (388)
T 1w3b_A 145 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVA 224 (388)
T ss_dssp HHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHH
Q psy9209 200 CYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQ 279 (349)
Q Consensus 200 ~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 279 (349)
.+++++..+|+++.++..+|.++...|++++|+..|++++...|. .+.++..+|.++...|++++|+..|+
T Consensus 225 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~ 295 (388)
T 1w3b_A 225 AYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH---------FPDAYCNLANALKEKGSVAEAEDCYN 295 (388)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS---------CHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 777777777777777777777777777777777777777777776 57777777777777777777777777
Q ss_pred HHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCccc
Q psy9209 280 KCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTRS 327 (349)
Q Consensus 280 ~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 327 (349)
++++..|++..++..++.++...|++++|+..++++++.+|++...+.
T Consensus 296 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 343 (388)
T 1w3b_A 296 TALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHS 343 (388)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred HHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 777777777777777777777777777777778777777777655443
No 3
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=267.67 Aligned_cols=309 Identities=12% Similarity=0.026 Sum_probs=280.4
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
.|..+...|++++|+..|+++++..|... .++..+|.++...|++++|+..+++++..+|++..++..++.
T Consensus 9 ~~~~~~~~g~~~~A~~~~~~~l~~~p~~~---------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 79 (359)
T 3ieg_A 9 LGKKLLAAGQLADALSQFHAAVDGDPDNY---------IAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGH 79 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCcccH---------HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHH
Confidence 47889999999999999999996443322 689999999999999999999999999999999888665554
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhCc---ccHHHHHHH------------HHHHHhcCChHHHHHHHHHHHHhCcccHHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLNP---NYLGVWTLL------------GHEYMEMKNTNAAIQCYRQAIEINNLDYRA 146 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~~---~~~~~~~~l------------a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 146 (349)
+ +...|++++|+..++++++.+| +++.++..+ |.++...|++++|+..++++++..|.++.+
T Consensus 80 ~---~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 156 (359)
T 3ieg_A 80 L---LLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAEL 156 (359)
T ss_dssp H---HHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred H---HHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 4 5556999999999999999999 888888777 799999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHH----------
Q psy9209 147 WYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALF---------- 216 (349)
Q Consensus 147 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~---------- 216 (349)
+..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+..++++++..|++..++.
T Consensus 157 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (359)
T 3ieg_A 157 RELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNK 236 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred --HHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHH
Q psy9209 217 --KLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSL 294 (349)
Q Consensus 217 --~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 294 (349)
.+|.++...|++++|+..+++++...|.. ......++..+|.++...|++++|+..++++++..|+++.++..
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 311 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSV-----AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKD 311 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 44888999999999999999999998871 11223567789999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCchhHHHHhhhcCCCCCCccc
Q psy9209 295 LRSIAQKRQPDESSSQPMECAVVLDPVPPSTRS 327 (349)
Q Consensus 295 l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 327 (349)
+|.++...|++++|+..|+++++++|+++.++.
T Consensus 312 ~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 344 (359)
T 3ieg_A 312 RAEAYLIEEMYDEAIQDYEAAQEHNENDQQIRE 344 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHH
Confidence 999999999999999999999999999876543
No 4
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=100.00 E-value=5.9e-38 Score=271.95 Aligned_cols=308 Identities=12% Similarity=0.030 Sum_probs=280.1
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
.|..+...|++++|+..|++++...+.. ..++..+|.++...|++++|+..|+++++.+|++..++..++
T Consensus 32 ~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~- 101 (450)
T 2y4t_A 32 LGKKLLAAGQLADALSQFHAAVDGDPDN---------YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRG- 101 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH-
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCcc---------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH-
Confidence 4778899999999999999999543322 268999999999999999999999999999999988765555
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhCcccH---HHHHHH------------HHHHHhcCChHHHHHHHHHHHHhCcccHHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLNPNYL---GVWTLL------------GHEYMEMKNTNAAIQCYRQAIEINNLDYRA 146 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~l------------a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 146 (349)
.++...|++++|+..|+++++.+|++. .++..+ |.++...|++++|+..|+++++..|.++.+
T Consensus 102 --~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 179 (450)
T 2y4t_A 102 --HLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL 179 (450)
T ss_dssp --HHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred --HHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH
Confidence 445557999999999999999999988 776555 667999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHH--------
Q psy9209 147 WYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKL-------- 218 (349)
Q Consensus 147 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l-------- 218 (349)
+..+|.++...|++++|+..|+++++..|.++.++..+|.++...|++++|+..|++++...|++...+..+
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 259 (450)
T 2y4t_A 180 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNK 259 (450)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998887666
Q ss_pred ----HHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHH
Q psy9209 219 ----AKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSL 294 (349)
Q Consensus 219 ----~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 294 (349)
|.++...|++++|+..|++++...|.. .......+..+|.++...|++++|+..++++++..|++..++..
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 334 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSI-----AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKD 334 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-----HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-----hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 999999999999999999999998871 11125588999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCchhHHHHhhhcCCCCCCcc
Q psy9209 295 LRSIAQKRQPDESSSQPMECAVVLDPVPPSTR 326 (349)
Q Consensus 295 l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 326 (349)
+|.++...|++++|+..|+++++++|+++.++
T Consensus 335 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 335 RAEAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 99999999999999999999999999987664
No 5
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=255.39 Aligned_cols=287 Identities=12% Similarity=0.095 Sum_probs=265.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
..+..+|..++..|++++|+..+++++..+|.+...+..++.+ +...|++++|+..++++++.+|+++.++..+|.+
T Consensus 23 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~---~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 99 (330)
T 3hym_B 23 DVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGT---LVELNKANELFYLSHKLVDLYPSNPVSWFAVGCY 99 (330)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHH---HHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHH---HHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 3578999999999999999999999999999988776555544 3445999999999999999999999999999999
Q ss_pred HHhcC-ChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHH
Q psy9209 120 YMEMK-NTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAM 198 (349)
Q Consensus 120 ~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 198 (349)
+...| ++++|+..|+++++.+|.++.++..+|.++...|++++|+..++++++..|++..++..+|.++...|++++|+
T Consensus 100 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 179 (330)
T 3hym_B 100 YLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAE 179 (330)
T ss_dssp HHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHH
Q psy9209 199 KCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCA 278 (349)
Q Consensus 199 ~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 278 (349)
..++++++..|.++.++..+|.++...|++++|+..+++++...+..+.....+....++..+|.++...|++++|+.++
T Consensus 180 ~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 259 (330)
T 3hym_B 180 RFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYH 259 (330)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999988653222223446889999999999999999999999
Q ss_pred HHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCccccC
Q psy9209 279 QKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTRSSK 329 (349)
Q Consensus 279 ~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 329 (349)
+++++..|++..++..+|.++...|++++|+.+|+++++++|+++.++..+
T Consensus 260 ~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 310 (330)
T 3hym_B 260 RQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTML 310 (330)
T ss_dssp HHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHH
T ss_pred HHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHH
Confidence 999999999999999999999999999999999999999999998765544
No 6
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-37 Score=275.29 Aligned_cols=310 Identities=12% Similarity=0.077 Sum_probs=282.9
Q ss_pred hhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q psy9209 3 NKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 82 (349)
Q Consensus 3 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~ 82 (349)
+..|.+.|++++|+..|+++++. +. + ..++..+|..+...|++++|+..|++++..+|++...+..++.+
T Consensus 279 ~~~~~~~g~~~~A~~~~~~~~~~-~~------~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 348 (597)
T 2xpi_A 279 LNKTSHEDELRRAEDYLSSINGL-EK------S---SDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLAS 348 (597)
T ss_dssp SCTTTTHHHHHHHHHHHHTSTTG-GG------C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHH
T ss_pred HHHHcCcchHHHHHHHHHHhhcC-Cc------h---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHH
Confidence 55677899999999999887732 11 1 26899999999999999999999999999999887776555544
Q ss_pred HHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYY 162 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (349)
+...|++++|+..+++++...|++..++..+|.+|...|++++|+..|+++++..|.+..+|..++.++...|++++
T Consensus 349 ---~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 425 (597)
T 2xpi_A 349 ---LHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQ 425 (597)
T ss_dssp ---HHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred ---HHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 44569999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q psy9209 163 GLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKL 242 (349)
Q Consensus 163 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 242 (349)
|+..|+++++..|.+..++..+|.++...|++++|+.+|+++++..|.++.++..+|.++...|++++|+..|++++...
T Consensus 426 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 505 (597)
T 2xpi_A 426 AISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLV 505 (597)
T ss_dssp HHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred cccCCCCCCcch-HHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCC
Q psy9209 243 DTFAAPPDKTCG-FFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPV 321 (349)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 321 (349)
|. ....+.. ..++..+|.++...|++++|+..++++++..|+++.++..++.++...|++++|...|+++++++|+
T Consensus 506 ~~---~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~ 582 (597)
T 2xpi_A 506 KK---TQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPN 582 (597)
T ss_dssp HH---SCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hc---cccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 54 1222323 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccc
Q psy9209 322 PPSTRSS 328 (349)
Q Consensus 322 ~~~~~~~ 328 (349)
++.++..
T Consensus 583 ~~~~~~~ 589 (597)
T 2xpi_A 583 EIMASDL 589 (597)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 8765543
No 7
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=249.99 Aligned_cols=284 Identities=14% Similarity=0.101 Sum_probs=260.9
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
+|..+...|++++|+..|++++...|... .++..++.++...|++++|+..+++++..+|+++.++..++.
T Consensus 28 ~a~~~~~~g~~~~A~~~~~~~l~~~p~~~---------~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 98 (330)
T 3hym_B 28 LAERHYYNCDFKMCYKLTSVVMEKDPFHA---------SCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGC 98 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCT---------TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCh---------hhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 47788899999999999999996443332 357788999999999999999999999999999888666654
Q ss_pred HHHhcCCCc-chHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCH
Q psy9209 82 IAQKRQPDE-SSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLP 160 (349)
Q Consensus 82 ~~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 160 (349)
+ +...| ++++|+..+++++..+|.++.++..+|.++...|++++|+..|+++++..|.+..++..+|.++...|++
T Consensus 99 ~---~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 175 (330)
T 3hym_B 99 Y---YLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNS 175 (330)
T ss_dssp H---HHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCH
T ss_pred H---HHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhH
Confidence 4 55568 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc---------cccHHHHHHHHHHHHhcCcHHHH
Q psy9209 161 YYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIG---------DADGKALFKLAKLYDKLNETEAA 231 (349)
Q Consensus 161 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~l~~~~~~~~~~~~A 231 (349)
++|+.+++++++..|.++.++..+|.++...|++++|+.++++++... |..+.++..+|.++...|++++|
T Consensus 176 ~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 255 (330)
T 3hym_B 176 KLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEA 255 (330)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999999999999999999999999999999999999999999985 66788999999999999999999
Q ss_pred HHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHH-HHcCCCC
Q psy9209 232 ADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIA-QKRQPDE 306 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~-~~~~~~~ 306 (349)
+..+++++...|. ...++..+|.++...|++++|+.+++++++++|+++.++..++.++ ...|+.+
T Consensus 256 ~~~~~~a~~~~~~---------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 256 LDYHRQALVLIPQ---------NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp HHHHHHHHHHSTT---------CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTTTTC--
T ss_pred HHHHHHHHhhCcc---------chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHhCchh
Confidence 9999999999998 7899999999999999999999999999999999999999999988 4555543
No 8
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=100.00 E-value=2.9e-36 Score=261.32 Aligned_cols=304 Identities=15% Similarity=0.135 Sum_probs=274.3
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchH---HHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAE---EAKSL 78 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~---~~~~~ 78 (349)
+|.++...|++++|+..|+++++..+.. ..++..+|.++...|++++|+..|++++..+|++. ..+..
T Consensus 66 l~~~~~~~g~~~~A~~~~~~al~~~p~~---------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 136 (450)
T 2y4t_A 66 RATVFLAMGKSKAALPDLTKVIQLKMDF---------TAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQ 136 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCc---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHH
Confidence 4778999999999999999999643322 26899999999999999999999999999999988 66655
Q ss_pred HHHH---------HHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHH
Q psy9209 79 LRSI---------AQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYG 149 (349)
Q Consensus 79 l~~~---------~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 149 (349)
+..+ +..+...|++++|+..|+++++..|.++.++..+|.++...|++++|+..|+++++.+|.++.++..
T Consensus 137 l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 216 (450)
T 2y4t_A 137 LIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYK 216 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4333 5667778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH------------HHHHHHhhCHHHHHHHHHHHHccccccH----H
Q psy9209 150 LGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL------------GEAFEKQEKISEAMKCYNKSRAIGDADG----K 213 (349)
Q Consensus 150 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l------------~~~~~~~~~~~~A~~~~~~a~~~~~~~~----~ 213 (349)
+|.++...|++++|+..|++++...|++...+..+ |.++...|++++|+.+|++++...|.++ .
T Consensus 217 l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~ 296 (450)
T 2y4t_A 217 ISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVR 296 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHH
Confidence 99999999999999999999999999999887666 9999999999999999999999999875 4
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHH
Q psy9209 214 ALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKS 293 (349)
Q Consensus 214 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 293 (349)
.+..+|.++...|++++|+..+++++...|. ...++..+|.++...|++++|+..+++++++.|+++.++.
T Consensus 297 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 367 (450)
T 2y4t_A 297 SKERICHCFSKDEKPVEAIRVCSEVLQMEPD---------NVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIRE 367 (450)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc---------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHH
Confidence 7889999999999999999999999999998 7899999999999999999999999999999999999999
Q ss_pred HHHHH------------HHHcC-----CCCCchhHHHH-hhhcCCCCC
Q psy9209 294 LLRSI------------AQKRQ-----PDESSSQPMEC-AVVLDPVPP 323 (349)
Q Consensus 294 ~l~~~------------~~~~~-----~~~~A~~~~~~-a~~~~p~~~ 323 (349)
.++.+ +...| +.+++.+.|++ +++..|++.
T Consensus 368 ~l~~~~~~~~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~ 415 (450)
T 2y4t_A 368 GLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNF 415 (450)
T ss_dssp HHHHHHHHHHHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGC
T ss_pred HHHHHHHHhhcccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCC
Confidence 99954 44555 34556888886 888888764
No 9
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=100.00 E-value=1e-36 Score=257.28 Aligned_cols=297 Identities=14% Similarity=0.075 Sum_probs=257.0
Q ss_pred hHHhhCcHHHHHH-HHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q psy9209 5 LYDKLNETEAAAD-LFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIA 83 (349)
Q Consensus 5 ~~~~~g~~~~A~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~ 83 (349)
.+...|++++|+. .|++++...+.. |... ...++.+|.++...|++++|+..|+++++.+|++..++..++
T Consensus 34 ~~~~~~~~~~a~~~~~~~a~~~~~~~---~~~~--~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~--- 105 (368)
T 1fch_A 34 AHPWLSDYDDLTSATYDKGYQFEEEN---PLRD--HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLG--- 105 (368)
T ss_dssp ------------CHHHHCCCCCCSSC---TTTT--CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH---
T ss_pred hhHHHHHHHHHHhhhhhHHHhcCCCC---cccc--hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHH---
Confidence 4556788999998 888777332222 1110 135889999999999999999999999999999988866555
Q ss_pred HhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHH---------------
Q psy9209 84 QKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWY--------------- 148 (349)
Q Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~--------------- 148 (349)
.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++...|.+...+.
T Consensus 106 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 1fch_A 106 TTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSK 185 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------
T ss_pred HHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHH
Confidence 44556799999999999999999999999999999999999999999999999999998766654
Q ss_pred -HHHHHHHHhCCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc
Q psy9209 149 -GLGQTYEILRLPYYGLYYYKQAHMVRPN--DPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL 225 (349)
Q Consensus 149 -~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 225 (349)
.++.++ ..|++++|+.++++++...|. ++.++..+|.++...|++++|+.++++++...|.++.++..+|.++...
T Consensus 186 ~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 264 (368)
T 1fch_A 186 RILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANG 264 (368)
T ss_dssp CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc
Confidence 466666 999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh-----------HHHHHH
Q psy9209 226 NETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA-----------EEAKSL 294 (349)
Q Consensus 226 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~-----------~~~~~~ 294 (349)
|++++|+..|++++...|. ...++..+|.++...|++++|+.+|++++++.|+. ..++..
T Consensus 265 g~~~~A~~~~~~al~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 335 (368)
T 1fch_A 265 NQSEEAVAAYRRALELQPG---------YIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWST 335 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHH
Confidence 9999999999999999998 79999999999999999999999999999999887 899999
Q ss_pred HHHHHHHcCCCCCchhHHHHhhhcC
Q psy9209 295 LRSIAQKRQPDESSSQPMECAVVLD 319 (349)
Q Consensus 295 l~~~~~~~~~~~~A~~~~~~a~~~~ 319 (349)
++.++...|++++|..+++++++..
T Consensus 336 l~~~~~~~g~~~~A~~~~~~~l~~~ 360 (368)
T 1fch_A 336 LRLALSMLGQSDAYGAADARDLSTL 360 (368)
T ss_dssp HHHHHHHHTCGGGHHHHHTTCHHHH
T ss_pred HHHHHHHhCChHhHHHhHHHHHHHH
Confidence 9999999999999999998877653
No 10
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=100.00 E-value=1.5e-35 Score=262.48 Aligned_cols=311 Identities=14% Similarity=0.108 Sum_probs=270.3
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhh--------------
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ-------------- 67 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~-------------- 67 (349)
+|.+|...|++++|+..|+++++..|... .++..+|.++...|++++|+..|+ ++.
T Consensus 65 la~~~~~~g~~~~A~~~~~~al~~~p~~~---------~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~~~~~~ 134 (537)
T 3fp2_A 65 ISACYISTGDLEKVIEFTTKALEIKPDHS---------KALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGASIEPML 134 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHTCHHHHHHHHH-HHC-----------CHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCchH---------HHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChHHHHHHH
Confidence 47888999999999999999995433222 578999999999999888887663 332
Q ss_pred --------------------------------------------------------------------------------
Q psy9209 68 -------------------------------------------------------------------------------- 67 (349)
Q Consensus 68 -------------------------------------------------------------------------------- 67 (349)
T Consensus 135 ~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a 214 (537)
T 3fp2_A 135 ERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVA 214 (537)
T ss_dssp HHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHH
Confidence
Q ss_pred ----------------hhhchHHHH----HHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChH
Q psy9209 68 ----------------HEETAEEAK----SLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTN 127 (349)
Q Consensus 68 ----------------~~~~~~~~~----~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 127 (349)
.+|+++..+ ..+..++..+...|++++|+..+++++..+|+ +.++..+|.++...|+++
T Consensus 215 ~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~ 293 (537)
T 3fp2_A 215 NDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQ 293 (537)
T ss_dssp HHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCH
T ss_pred HHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHH
Confidence 233332221 12344556666779999999999999999999 899999999999999999
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 128 AAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 128 ~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
+|+..|+++++.+|.++.++..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+..++++++.
T Consensus 294 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 373 (537)
T 3fp2_A 294 EFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLK 373 (537)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHh----------CCHHHHHHH
Q psy9209 208 GDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA----------NNLDTAYKC 277 (349)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~~~~A~~~ 277 (349)
.|.++.++..+|.++...|++++|+..|++++...|.. .........+..+|.++... |++++|+.+
T Consensus 374 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~ 450 (537)
T 3fp2_A 374 FPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ---EKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKL 450 (537)
T ss_dssp CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC---SSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc---hhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHH
Confidence 99999999999999999999999999999999998872 22233445577889999999 999999999
Q ss_pred HHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCcc
Q psy9209 278 AQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTR 326 (349)
Q Consensus 278 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 326 (349)
|+++++.+|++..++..+|.++...|++++|+..|+++++++|+++...
T Consensus 451 ~~~a~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 499 (537)
T 3fp2_A 451 LTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKL 499 (537)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999999999999999999999999877653
No 11
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=100.00 E-value=9.2e-35 Score=244.13 Aligned_cols=284 Identities=15% Similarity=0.150 Sum_probs=259.5
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh---chHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE---TAEEAKSL 78 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~---~~~~~~~~ 78 (349)
.|.++...|++++|+..|+++++..|... .++..+|.++...|++++|+..+++++...| ++...+..
T Consensus 43 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T 3ieg_A 43 RATVFLAMGKSKAALPDLTKVIALKMDFT---------AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQ 113 (359)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCcc---------hHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHH
Confidence 47889999999999999999995433222 6799999999999999999999999999999 88887766
Q ss_pred HHHH---------HHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHH
Q psy9209 79 LRSI---------AQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYG 149 (349)
Q Consensus 79 l~~~---------~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 149 (349)
++.+ +..+...|++++|+..++++++..|.++.++..+|.++...|++++|+..++++++..|.++.++..
T Consensus 114 l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3ieg_A 114 LVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYK 193 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 6432 5667778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHH------------HHHHHHHHhhCHHHHHHHHHHHHccccccHH----
Q psy9209 150 LGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLT------------ALGEAFEKQEKISEAMKCYNKSRAIGDADGK---- 213 (349)
Q Consensus 150 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~------------~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---- 213 (349)
+|.++...|++++|+..++++++..|+++.++. .+|.++...|++++|+..++++++..|.++.
T Consensus 194 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 273 (359)
T 3ieg_A 194 ISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVR 273 (359)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHH
Confidence 999999999999999999999999999987654 4488899999999999999999999998774
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHH
Q psy9209 214 ALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKS 293 (349)
Q Consensus 214 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 293 (349)
++..+|.++...|++++|+..+++++...|. .+.++..+|.++...|++++|+.+|+++++++|++..++.
T Consensus 274 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 344 (359)
T 3ieg_A 274 SKERICHCFSKDEKPVEAIRICSEVLQMEPD---------NVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIRE 344 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcc---------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHH
Confidence 4667999999999999999999999999998 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q psy9209 294 LLRSIAQKRQ 303 (349)
Q Consensus 294 ~l~~~~~~~~ 303 (349)
.++.+....+
T Consensus 345 ~l~~~~~~~~ 354 (359)
T 3ieg_A 345 GLEKAQRLLK 354 (359)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988876544
No 12
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=260.76 Aligned_cols=318 Identities=17% Similarity=0.105 Sum_probs=250.6
Q ss_pred hhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhc--CCHHHHHHHHHHHhhhhhchHHHHHHHH
Q psy9209 3 NKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA--NNLDTAYKCAQKCLQHEETAEEAKSLLR 80 (349)
Q Consensus 3 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~A~~~~~~~l~~~~~~~~~~~~l~ 80 (349)
|.+|...|++++|+..|+++++..+... .+.......++..+|.++... +++++|+.+|+++++++|+++.++..++
T Consensus 101 a~~y~~~g~~~~A~~~~~ka~~i~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~ 179 (472)
T 4g1t_A 101 AWVYYHMGRLSDVQIYVDKVKHVCEKFS-SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLA 179 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSC-CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhHhcc-cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 6788999999999999999986544332 223333346788888777654 5799999999999999999999988887
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Q psy9209 81 SIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYME----MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI 156 (349)
Q Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 156 (349)
.+...+...++.++|++.++++++++|+++.++..+|..+.. .|++++|+.++++++..+|..+.++..+|.+|..
T Consensus 180 ~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~ 259 (472)
T 4g1t_A 180 IASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRR 259 (472)
T ss_dssp HHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 776666566888999999999999999999999888877655 4678899999999999999999999999999999
Q ss_pred hCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh-------------------hCHHHHHHHHHHHHccccccHHHHHH
Q psy9209 157 LRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQ-------------------EKISEAMKCYNKSRAIGDADGKALFK 217 (349)
Q Consensus 157 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------------------~~~~~A~~~~~~a~~~~~~~~~~~~~ 217 (349)
.|++++|+..++++++.+|+++.++..+|.+|... +.+++|+..++++++.+|....++..
T Consensus 260 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 339 (472)
T 4g1t_A 260 KDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSI 339 (472)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHH
T ss_pred cCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhh
Confidence 99999999999999999999999999999998653 44788999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHH-HHHhCCHHHHHHHHHHHHccc-----------
Q psy9209 218 LAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANH-HLKANNLDTAYKCAQKCLQHE----------- 285 (349)
Q Consensus 218 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~A~~~~~~a~~~~----------- 285 (349)
+|.++...|++++|+..|++++...|. ......++..+|.+ +...|++++|+.+|++++++.
T Consensus 340 lg~~~~~~~~~~~A~~~~~kaL~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~ 413 (472)
T 4g1t_A 340 LASLHALADQYEEAEYYFQKEFSKELT------PVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKD 413 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSCCC------HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhcCCC------ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 999999999999999999999998776 11123456677765 457899999999999998764
Q ss_pred -------------CChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCccc
Q psy9209 286 -------------ETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTRS 327 (349)
Q Consensus 286 -------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 327 (349)
|+++.++..+|.++..+|++++|+++|++++++.|.+|.+..
T Consensus 414 ~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~~p~a~~ 468 (472)
T 4g1t_A 414 KLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSASS 468 (472)
T ss_dssp HHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC---------------------
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcHhh
Confidence 555678899999999999999999999999999999887654
No 13
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=261.54 Aligned_cols=234 Identities=13% Similarity=0.042 Sum_probs=131.2
Q ss_pred CcchHHHHHHHHHHHh-----h--C-------cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q psy9209 89 DESSSQAVLYFQRALK-----L--N-------PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTY 154 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~-----~--~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 154 (349)
.|++++|+..|+++++ + + |..+.++..+|.++...|++++|+..|+++++..|. ..++..+|.++
T Consensus 202 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~ 280 (514)
T 2gw1_A 202 PESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIM 280 (514)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHH
Confidence 4555555555555555 3 1 333445555555555556665555555555555554 44444444444
Q ss_pred HHhCCH----------------------------------HHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHH
Q psy9209 155 EILRLP----------------------------------YYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKC 200 (349)
Q Consensus 155 ~~~~~~----------------------------------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 200 (349)
...|++ ++|+..+++++...|.++.++..+|.++...|++++|+..
T Consensus 281 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 360 (514)
T 2gw1_A 281 ADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETL 360 (514)
T ss_dssp HTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHH
Confidence 444444 4444444444444444444444455555555555555555
Q ss_pred HHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH---hCCHHHHHHH
Q psy9209 201 YNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK---ANNLDTAYKC 277 (349)
Q Consensus 201 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~g~~~~A~~~ 277 (349)
++++++..|.++.++..+|.++...|++++|+..+++++...|.. ........++..+|.++.. .|++++|+..
T Consensus 361 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~ 437 (514)
T 2gw1_A 361 FSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKL---DGIYVGIAPLVGKATLLTRNPTVENFIEATNL 437 (514)
T ss_dssp HHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS---SSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc---chHHHHHHHHHHHHHHHhhhhhcCCHHHHHHH
Confidence 555555555555555555555555555555555555555555541 1111113366666777666 6777777777
Q ss_pred HHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCcc
Q psy9209 278 AQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTR 326 (349)
Q Consensus 278 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 326 (349)
+++++...|++..++..++.++...|++++|+..|+++++++|+++.++
T Consensus 438 ~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 438 LEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 7777666666666666777777777777777777777777766655443
No 14
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-35 Score=259.31 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
.++..+|.++...|++++|+..+++++..+|+ ... +..++.++...|++++|+..+++++..+|.++.++..+|.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~---~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 313 (514)
T 2gw1_A 238 ISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNS---YIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQM 313 (514)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHH---HHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHH---HHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHH
Confidence 45666777777777777777777777777776 444 33444556667888888888888888888889999999999
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMK 199 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 199 (349)
+...|++++|+..|+++++..|.+..++..+|.++...|++++|+..++++++..|.++.++..+|.++...|++++|+.
T Consensus 314 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 393 (514)
T 2gw1_A 314 NFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALK 393 (514)
T ss_dssp HHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccccccHH------HHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHH
Q psy9209 200 CYNKSRAIGDADGK------ALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDT 273 (349)
Q Consensus 200 ~~~~a~~~~~~~~~------~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 273 (349)
.+++++...|.++. ++..+|.++...... ..+.+++...... ....+....++..+|.++...|++++
T Consensus 394 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~A~~~~~~a--~~~~~~~~~~~~~la~~~~~~g~~~~ 467 (514)
T 2gw1_A 394 QYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTV----ENFIEATNLLEKA--SKLDPRSEQAKIGLAQMKLQQEDIDE 467 (514)
T ss_dssp HHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCT----THHHHHHHHHHHH--HHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhc----CCHHHHHHHHHHH--HHhCcccHHHHHHHHHHHHHhcCHHH
Confidence 99999999888755 999999988755433 3445554433221 11245678899999999999999999
Q ss_pred HHHHHHHHHcccCChHHHHHHHHHH
Q psy9209 274 AYKCAQKCLQHEETAEEAKSLLRSI 298 (349)
Q Consensus 274 A~~~~~~a~~~~~~~~~~~~~l~~~ 298 (349)
|+.+|++++++.|+++.++..+...
T Consensus 468 A~~~~~~a~~~~~~~~~~~~~~~~~ 492 (514)
T 2gw1_A 468 AITLFEESADLARTMEEKLQAITFA 492 (514)
T ss_dssp HHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccHHHHHHHHHH
Confidence 9999999999999999988776544
No 15
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.8e-35 Score=260.55 Aligned_cols=305 Identities=13% Similarity=0.125 Sum_probs=275.0
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHH------------------------------------
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYL------------------------------------ 45 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------------------------------------ 45 (349)
.+.+|.+.|++++|+..|+++++..+... .++..+
T Consensus 206 l~~~~~~~g~~~~A~~~~~~~~~~~p~~~---------~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 276 (597)
T 2xpi_A 206 RGQVYTNLSNFDRAKECYKEALMVDAKCY---------EAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYM 276 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCchhh---------HHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHH
Confidence 46789999999999999999995433221 223322
Q ss_pred --HHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhc
Q psy9209 46 --ANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEM 123 (349)
Q Consensus 46 --~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 123 (349)
+..+...|++++|+..|++++.. |.+...+..++ ..+...|++++|+..|+++++.+|++..++..++.++...
T Consensus 277 ~~~~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~l~---~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 352 (597)
T 2xpi_A 277 LKLNKTSHEDELRRAEDYLSSINGL-EKSSDLLLCKA---DTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHES 352 (597)
T ss_dssp TTSCTTTTHHHHHHHHHHHHTSTTG-GGCHHHHHHHH---HHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHcCcchHHHHHHHHHHhhcC-CchHHHHHHHH---HHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHh
Confidence 55566789999999999999987 66666655444 4566679999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHH
Q psy9209 124 KNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNK 203 (349)
Q Consensus 124 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 203 (349)
|++++|+..++++++..|.+..++..+|.+|...|++++|+.+|+++++..|.+..+|..+|.++...|++++|+..|++
T Consensus 353 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 432 (597)
T 2xpi_A 353 GEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTT 432 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 204 SRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 204 a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
+++..|.+..++..+|.++...|++++|+..|++++...|. .+.++..+|.++...|++++|+..|+++++
T Consensus 433 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 503 (597)
T 2xpi_A 433 AARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQY---------DPLLLNELGVVAFNKSDMQTAINHFQNALL 503 (597)
T ss_dssp HHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 789999999999999999999999999998
Q ss_pred c------cCCh-HHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCcccc
Q psy9209 284 H------EETA-EEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTRSS 328 (349)
Q Consensus 284 ~------~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 328 (349)
. +|+. ..++..++.++...|++++|+..++++++.+|+++.++..
T Consensus 504 ~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 555 (597)
T 2xpi_A 504 LVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTA 555 (597)
T ss_dssp HHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred hhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 7 5654 7899999999999999999999999999999988765543
No 16
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=100.00 E-value=3.6e-35 Score=260.03 Aligned_cols=304 Identities=14% Similarity=0.085 Sum_probs=244.5
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
+|..+...|++++|+..|++++...|... .++..+|.++...|++++|+..|++++..+|++..++..++.
T Consensus 31 ~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 101 (537)
T 3fp2_A 31 RGNHFFTAKNFNEAIKYYQYAIELDPNEP---------VFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRAS 101 (537)
T ss_dssp HHHHHHHTTCCC-CHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhCCCCc---------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 47889999999999999999996443322 689999999999999999999999999999999887665554
Q ss_pred HHHhcCCCc-----------------------------------------------------------------------
Q psy9209 82 IAQKRQPDE----------------------------------------------------------------------- 90 (349)
Q Consensus 82 ~~~~~~~~~----------------------------------------------------------------------- 90 (349)
+... .|
T Consensus 102 ~~~~---~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (537)
T 3fp2_A 102 ANES---LGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHL 178 (537)
T ss_dssp HHHH---HTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHH
T ss_pred HHHH---cCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHH
Confidence 4322 23
Q ss_pred --------------------------------------chHHHHHHHHHHHhhCcccHH-------HHHHHHHHHHhcCC
Q psy9209 91 --------------------------------------SSSQAVLYFQRALKLNPNYLG-------VWTLLGHEYMEMKN 125 (349)
Q Consensus 91 --------------------------------------~~~~A~~~~~~~~~~~~~~~~-------~~~~la~~~~~~~~ 125 (349)
++++|+..++++++.+|+++. ++..+|.++...|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~ 258 (537)
T 3fp2_A 179 EVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNN 258 (537)
T ss_dssp HHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhccc
Confidence 455555566666666776644 46777788888888
Q ss_pred hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy9209 126 TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSR 205 (349)
Q Consensus 126 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 205 (349)
+++|+..|+++++.+|. ..++..+|.++...|++++|+.++++++...|+++.++..+|.++...|++++|+..+++++
T Consensus 259 ~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 337 (537)
T 3fp2_A 259 LLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQ 337 (537)
T ss_dssp HHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 88888888888888887 88888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHccc
Q psy9209 206 AIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE 285 (349)
Q Consensus 206 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 285 (349)
..+|.++.++..+|.++...|++++|+..+++++...|. .+.++..+|.++...|++++|+..|+++++..
T Consensus 338 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 338 SLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPT---------LPEVPTFFAEILTDRGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp HHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcC
Confidence 888888888888888888888888888888888888887 67788888888888888888888888888877
Q ss_pred CChHH------HHHHHHHHHHHc----------CCCCCchhHHHHhhhcCCCCCCccc
Q psy9209 286 ETAEE------AKSLLRSIAQKR----------QPDESSSQPMECAVVLDPVPPSTRS 327 (349)
Q Consensus 286 ~~~~~------~~~~l~~~~~~~----------~~~~~A~~~~~~a~~~~p~~~~~~~ 327 (349)
|+... .+..++.++... |++++|+..|+++++.+|+++.++.
T Consensus 409 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 466 (537)
T 3fp2_A 409 EVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKI 466 (537)
T ss_dssp HHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 65432 245556777777 8888888888888888888765543
No 17
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=244.42 Aligned_cols=265 Identities=15% Similarity=0.095 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
..++.+|..+...|++++|+..|++++..+|++..++..++. ++...|++++|+..|+++++.+|+++.++..+|.+
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~---~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGI---TQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH---HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHH---HHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 358999999999999999999999999999999888665554 45557999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHH----------HHHHHHhCCHHHHHHHHHHHHhcCCC--ChHHHHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGL----------GQTYEILRLPYYGLYYYKQAHMVRPN--DPRMLTALGEA 187 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l----------~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~ 187 (349)
+...|++++|+..|+++++..|.+..++..+ |.++...|++++|+.++++++...|. ++.++..+|.+
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 222 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVL 222 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHH
T ss_pred HHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHH
Confidence 9999999999999999999999877666555 99999999999999999999999999 89999999999
Q ss_pred HHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH
Q psy9209 188 FEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK 267 (349)
Q Consensus 188 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 267 (349)
+...|++++|+.+|+++++..|.++.++..+|.++...|++++|+..|++++...|. ...++..+|.++..
T Consensus 223 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~ 293 (365)
T 4eqf_A 223 FHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPG---------FIRSRYNLGISCIN 293 (365)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---------chHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 79999999999999
Q ss_pred hCCHHHHHHHHHHHHcccCC------------hHHHHHHHHHHHHHcCCCCCchhHHHHhh
Q psy9209 268 ANNLDTAYKCAQKCLQHEET------------AEEAKSLLRSIAQKRQPDESSSQPMECAV 316 (349)
Q Consensus 268 ~g~~~~A~~~~~~a~~~~~~------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 316 (349)
.|++++|+.+|++++++.|+ ...++..++.++..+|+.+.+....++.+
T Consensus 294 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~l 354 (365)
T 4eqf_A 294 LGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDL 354 (365)
T ss_dssp HTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHhhH
Confidence 99999999999999999876 36788999999999999887776665533
No 18
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=245.85 Aligned_cols=311 Identities=14% Similarity=0.050 Sum_probs=257.3
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhc--------hH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET--------AE 73 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~--------~~ 73 (349)
.|.++..+|++++|+..|+++++..+.............+|..+|.+|...|++++|+.++++++.+.+. .+
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 4678899999999999999999754433322222223467999999999999999999999999987553 23
Q ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHH---hcCChHHHHHHHHHHHHhCcccHHHHHHH
Q psy9209 74 EAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYM---EMKNTNAAIQCYRQAIEINNLDYRAWYGL 150 (349)
Q Consensus 74 ~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 150 (349)
..+...+. +......+++++|+.+|+++++++|+++.++..+|.++. ..++.++|++.++++++++|.++.++..+
T Consensus 137 ~~~~~~g~-~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l 215 (472)
T 4g1t_A 137 ELDCEEGW-TRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLL 215 (472)
T ss_dssp HHHHHHHH-HHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHHHHHH-HHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHH
Confidence 33322222 122234578999999999999999999999999988854 45788899999999999999999999988
Q ss_pred HHHHHH----hCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc-
Q psy9209 151 GQTYEI----LRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL- 225 (349)
Q Consensus 151 ~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~- 225 (349)
|..+.. .|++++|+.++++++..+|..+.++..+|.++...|++++|+..++++++.+|+++.++..+|.+|...
T Consensus 216 ~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~ 295 (472)
T 4g1t_A 216 ALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKV 295 (472)
T ss_dssp HHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 877654 467889999999999999999999999999999999999999999999999999999999999988653
Q ss_pred ------------------CcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 226 ------------------NETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 226 ------------------~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
+.+++|+..+++++...|. ...++..+|.++...|++++|+.+|+++++..|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 296 FQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDN---------LFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTT---------TCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCc---------hhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 3467899999999999998 7888999999999999999999999999999887
Q ss_pred hHH---HHHHHHHH-HHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 288 AEE---AKSLLRSI-AQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 288 ~~~---~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
... .+..++.+ ....|++++|+..|++++++.|++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~ 405 (472)
T 4g1t_A 367 PVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKS 405 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCC
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 654 34555554 456889999999999999887764
No 19
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=100.00 E-value=2.8e-34 Score=238.18 Aligned_cols=273 Identities=15% Similarity=0.047 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
..++.+|..+...|++++|+..+++++..+|++..++..++ .++...|++++|+..++++++.+|+++.++..+|.+
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLG---LTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH---HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHH---HHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 45889999999999999999999999999999988866555 445557999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHH--------------HH-HHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGL--------------GQ-TYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l--------------~~-~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 184 (349)
+...|++++|+..++++++..|.+...+..+ +. ++...|++++|+.+++++++..|.++.++..+
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 178 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASL 178 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 9999999999999999999999987777776 66 68899999999999999999999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHH
Q psy9209 185 GEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANH 264 (349)
Q Consensus 185 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (349)
|.++...|++++|+.+++++++..|.++.++..+|.++...|++++|+..+++++...|. ...++..+|.+
T Consensus 179 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~l~~~ 249 (327)
T 3cv0_A 179 GVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPG---------YVRVMYNMAVS 249 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---------CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988 78999999999
Q ss_pred HHHhCCHHHHHHHHHHHHcccCC------------hHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCC
Q psy9209 265 HLKANNLDTAYKCAQKCLQHEET------------AEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPS 324 (349)
Q Consensus 265 ~~~~g~~~~A~~~~~~a~~~~~~------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 324 (349)
+...|++++|+.++++++...|+ ...++..++.++...|++++|...++++++..|++..
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~ 321 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFG 321 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchhhh
Confidence 99999999999999999999999 8999999999999999999999999999888776544
No 20
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=100.00 E-value=3.2e-33 Score=234.11 Aligned_cols=251 Identities=9% Similarity=0.094 Sum_probs=232.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcc-hHHHHHHHHHHHhhCcccHHHHHHHH
Q psy9209 39 FFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDES-SSQAVLYFQRALKLNPNYLGVWTLLG 117 (349)
Q Consensus 39 ~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~~A~~~~~~~~~~~~~~~~~~~~la 117 (349)
..++..+|.++...|++++|+..+++++.++|++..++..++.+.. ..|+ +++|+..|++++.++|++..+|+.+|
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~---~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g 173 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLK---SLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH---HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHH---HcccCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 4689999999999999999999999999999999999777776544 4586 99999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH-hhCHHH
Q psy9209 118 HEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK-QEKISE 196 (349)
Q Consensus 118 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 196 (349)
.++..+|++++|+..|+++++++|++..+|.++|.++...|++++|+.+|+++++++|++..+|+.+|.++.. .|..++
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~e 253 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDR 253 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 565577
Q ss_pred H-----HHHHHHHHccccccHHHHHHHHHHHHhcC--cHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhC
Q psy9209 197 A-----MKCYNKSRAIGDADGKALFKLAKLYDKLN--ETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKAN 269 (349)
Q Consensus 197 A-----~~~~~~a~~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 269 (349)
| +.+|++++.++|++..+|+.+|.++...| ++++|+..++++ ...|. ...++..+|.++..+|
T Consensus 254 A~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~---------~~~al~~La~~~~~~~ 323 (382)
T 2h6f_A 254 AVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHS---------SPYLIAFLVDIYEDML 323 (382)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCC---------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCC---------CHHHHHHHHHHHHHHh
Confidence 7 59999999999999999999999999988 699999999888 77777 7999999999999985
Q ss_pred ---------CHHHHHHHHHHH-HcccCChHHHHHHHHHHHHHc
Q psy9209 270 ---------NLDTAYKCAQKC-LQHEETAEEAKSLLRSIAQKR 302 (349)
Q Consensus 270 ---------~~~~A~~~~~~a-~~~~~~~~~~~~~l~~~~~~~ 302 (349)
.+++|+.+|+++ ++++|.....|..++..+..+
T Consensus 324 ~~~~~~~~~~~~~A~~~~~~l~~~~DP~r~~~w~~~~~~l~~~ 366 (382)
T 2h6f_A 324 ENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSK 366 (382)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 359999999999 999999999999998877654
No 21
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=100.00 E-value=1.7e-34 Score=243.66 Aligned_cols=265 Identities=16% Similarity=0.178 Sum_probs=234.7
Q ss_pred HHHhcCCHHHHHH-HHHHHhhhhhchHHH-HHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCC
Q psy9209 48 HHLKANNLDTAYK-CAQKCLQHEETAEEA-KSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKN 125 (349)
Q Consensus 48 ~~~~~~~~~~A~~-~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 125 (349)
++...|++++|+. .+++++...|+++.. ...+..++..+...|++++|+..|+++++.+|.++.++..+|.++...|+
T Consensus 34 ~~~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 113 (368)
T 1fch_A 34 AHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQ 113 (368)
T ss_dssp ------------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcC
Confidence 5667799999999 999999988876521 11233455566667999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHH----------------HHHHHHH
Q psy9209 126 TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLT----------------ALGEAFE 189 (349)
Q Consensus 126 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~----------------~l~~~~~ 189 (349)
+++|+..|+++++.+|.++.++..+|.++...|++++|+..+++++...|.+...+. .++.++
T Consensus 114 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (368)
T 1fch_A 114 ELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL- 192 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-
Confidence 999999999999999999999999999999999999999999999999999887665 466666
Q ss_pred HhhCHHHHHHHHHHHHccccc--cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH
Q psy9209 190 KQEKISEAMKCYNKSRAIGDA--DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK 267 (349)
Q Consensus 190 ~~~~~~~A~~~~~~a~~~~~~--~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 267 (349)
..|++++|+..+++++...|. .+.++..+|.++...|++++|+..+++++...|. .+.++..+|.++..
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---------~~~~~~~l~~~~~~ 263 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN---------DYLLWNKLGATLAN 263 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC---------CHHHHHHHHHHHHH
Confidence 999999999999999999999 8999999999999999999999999999999998 78999999999999
Q ss_pred hCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 268 ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 268 ~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
.|++++|+..|+++++..|++..++..+|.++...|++++|+..|++++++.|++
T Consensus 264 ~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 264 GNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 22
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=100.00 E-value=2e-33 Score=236.88 Aligned_cols=270 Identities=15% Similarity=0.096 Sum_probs=232.0
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
+|..+...|++++|+..|+++++..|.. ..++..+|.++...|++++|+..|++++..+|++..++..++
T Consensus 71 ~~~~~~~~g~~~~A~~~~~~al~~~p~~---------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~- 140 (365)
T 4eqf_A 71 EGLKRLKEGDLPVTILFMEAAILQDPGD---------AEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALA- 140 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH-
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCcCC---------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHH-
Confidence 4778999999999999999999644332 268999999999999999999999999999999988865555
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHH----------HHHHHhcCChHHHHHHHHHHHHhCcc--cHHHHHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLL----------GHEYMEMKNTNAAIQCYRQAIEINNL--DYRAWYG 149 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l----------a~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~ 149 (349)
.++...|++++|+..++++++..|++..++..+ |.++...|++++|+..|+++++..|. ++.++..
T Consensus 141 --~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 218 (365)
T 4eqf_A 141 --VSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTG 218 (365)
T ss_dssp --HHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred --HHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHH
Confidence 445567999999999999999999877666554 99999999999999999999999999 8999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHH
Q psy9209 150 LGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETE 229 (349)
Q Consensus 150 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (349)
+|.++...|++++|+.+|+++++..|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|+++
T Consensus 219 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 219 LGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCC---CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 230 AAADLFMEFVSKLDTFAAPP---DKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 230 ~A~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
+|+..|++++.+.|...... .......+|..++.++...|+.+.+..+.++.+.
T Consensus 299 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~l~ 355 (365)
T 4eqf_A 299 EAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLD 355 (365)
T ss_dssp HHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHhhHH
Confidence 99999999999998732110 0112468899999999999999999888776443
No 23
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=100.00 E-value=6.3e-34 Score=238.41 Aligned_cols=252 Identities=12% Similarity=0.083 Sum_probs=232.4
Q ss_pred HhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHhCccc
Q psy9209 65 CLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKN-TNAAIQCYRQAIEINNLD 143 (349)
Q Consensus 65 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~a~~~~~~~ 143 (349)
++..+|++..++..++.+ +...|++++|+..+++++.++|++..+|+.+|.++..+|+ +++|+..|+++++++|++
T Consensus 89 ai~~~p~~~~a~~~lg~~---~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~ 165 (382)
T 2h6f_A 89 QIIYSDKFRDVYDYFRAV---LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN 165 (382)
T ss_dssp EECCCHHHHHHHHHHHHH---HHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred hhhCChhhHHHHHHHHHH---HHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC
Confidence 456788888887666655 4556999999999999999999999999999999999997 999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHH
Q psy9209 144 YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYD 223 (349)
Q Consensus 144 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 223 (349)
..+|+++|.++..+|++++|+..|+++++++|++..+|..+|.++...|++++|+.+|+++++++|.+..+|+.+|.++.
T Consensus 166 ~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~ 245 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVIS 245 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-cCcHHHH-----HHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhC--CHHHHHHHHHHHHcccCChHHHHHHH
Q psy9209 224 K-LNETEAA-----ADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKAN--NLDTAYKCAQKCLQHEETAEEAKSLL 295 (349)
Q Consensus 224 ~-~~~~~~A-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~a~~~~~~~~~~~~~l 295 (349)
. .|..++| +..|++++.++|+ +..+|+.+|.++...| ++++|+..++++ +.+|++..++..+
T Consensus 246 ~l~~~~~eA~~~~el~~~~~Al~l~P~---------~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~~~~al~~L 315 (382)
T 2h6f_A 246 NTTGYNDRAVLEREVQYTLEMIKLVPH---------NESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHSSPYLIAFL 315 (382)
T ss_dssp HTTCSCSHHHHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCCCHHHHHHH
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCCCHHHHHHH
Confidence 9 5665777 5999999999999 7999999999999988 799999999998 9999999999999
Q ss_pred HHHHHHcC--------C-CCCchhHHHHh-hhcCCCCCCccccC
Q psy9209 296 RSIAQKRQ--------P-DESSSQPMECA-VVLDPVPPSTRSSK 329 (349)
Q Consensus 296 ~~~~~~~~--------~-~~~A~~~~~~a-~~~~p~~~~~~~~~ 329 (349)
+.++..+| + .++|+.+|+++ ++++|.....|..+
T Consensus 316 a~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~DP~r~~~w~~~ 359 (382)
T 2h6f_A 316 VDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYI 359 (382)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 99999885 2 48899999999 99999887665543
No 24
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=100.00 E-value=1.4e-32 Score=227.96 Aligned_cols=274 Identities=14% Similarity=0.126 Sum_probs=239.2
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
+|..+...|++++|+..|+++++..+.. ..++..+|.++...|++++|+..++++++.+|++..++..++
T Consensus 27 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la- 96 (327)
T 3cv0_A 27 EGLSMLKLANLAEAALAFEAVCQAAPER---------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALA- 96 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH-
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHH-
Confidence 4778899999999999999999644332 267899999999999999999999999999999988765555
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHH--------------HH-HHHhcCChHHHHHHHHHHHHhCcccHHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLL--------------GH-EYMEMKNTNAAIQCYRQAIEINNLDYRA 146 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l--------------a~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 146 (349)
..+...|++++|+..+++++...|.....+..+ +. ++...|++++|+..++++++..|.++.+
T Consensus 97 --~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 174 (327)
T 3cv0_A 97 --VSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQL 174 (327)
T ss_dssp --HHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred --HHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Confidence 445567999999999999999999988777776 66 6889999999999999999999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC
Q psy9209 147 WYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN 226 (349)
Q Consensus 147 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 226 (349)
+..+|.++...|++++|+.+++++++..|+++.++..+|.++...|++++|+..++++++..|.++.++..+|.++...|
T Consensus 175 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g 254 (327)
T 3cv0_A 175 HASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMS 254 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhcccccCCCCC---CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 227 ETEAAADLFMEFVSKLDTFAAPPD---KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 227 ~~~~A~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
++++|+..+++++...|....... ......++..+|.++...|++++|...++++++..|+
T Consensus 255 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~ 318 (327)
T 3cv0_A 255 QYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAK 318 (327)
T ss_dssp CHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHH
T ss_pred cHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcch
Confidence 999999999999999887210000 1115789999999999999999999999988776543
No 25
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=4e-32 Score=211.48 Aligned_cols=200 Identities=17% Similarity=0.093 Sum_probs=172.0
Q ss_pred cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy9209 107 PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGE 186 (349)
Q Consensus 107 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 186 (349)
|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++++|+++.++..+|.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh-----------hCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchH
Q psy9209 187 AFEKQ-----------EKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGF 255 (349)
Q Consensus 187 ~~~~~-----------~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 255 (349)
++... |++++|+..|+++++.+|+++.++..+|.++...|++++|+..|+++++++ . .+
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~---------~~ 151 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-D---------TP 151 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C---------CH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c---------ch
Confidence 99999 999999999999999999999999999999999999999999999999988 6 78
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhh
Q psy9209 256 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAV 316 (349)
Q Consensus 256 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 316 (349)
.++..+|.++...|++++|+..|+++++.+|+++.++..++.++...|++++|+..|+++-
T Consensus 152 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 152 EIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAALEH 212 (217)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999988764
No 26
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=100.00 E-value=1.3e-31 Score=216.35 Aligned_cols=257 Identities=14% Similarity=0.050 Sum_probs=224.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCccc----HHHHHHH
Q psy9209 41 AFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNY----LGVWTLL 116 (349)
Q Consensus 41 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l 116 (349)
.++.+|.+++..|++++|+..|+++++.+|++..++..++. ++...|++++|+..++++++ .|.+ ..++..+
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~---~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~l 80 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAV---CYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYY 80 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHH---HHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH---HHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHH
Confidence 57889999999999999999999999999998877555554 56667999999999999999 4433 4458999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHH
Q psy9209 117 GHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISE 196 (349)
Q Consensus 117 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 196 (349)
|.++...|++++|+..|+++++.+|.++.++..+|.++...|++++|+.+++++++.+|.++.++..+|......+++++
T Consensus 81 g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~ 160 (272)
T 3u4t_A 81 GKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVK 160 (272)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999955555679999
Q ss_pred HHHHHHHHHccccccHHHHHHHHHHHHhcCc---HHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHH
Q psy9209 197 AMKCYNKSRAIGDADGKALFKLAKLYDKLNE---TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDT 273 (349)
Q Consensus 197 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 273 (349)
|+..|+++++..|+++.++..+|.++...|+ +++|+..+++++......+... ......++..+|.++...|++++
T Consensus 161 A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~ 239 (272)
T 3u4t_A 161 ADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYYYTINRDKVK 239 (272)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHHcCCHHH
Confidence 9999999999999999999999999999999 9999999999999873310000 11235789999999999999999
Q ss_pred HHHHHHHHHcccCChHHHHHHHHHHHHHc
Q psy9209 274 AYKCAQKCLQHEETAEEAKSLLRSIAQKR 302 (349)
Q Consensus 274 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 302 (349)
|+.+++++++++|+++.++..++.+....
T Consensus 240 A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 268 (272)
T 3u4t_A 240 ADAAWKNILALDPTNKKAIDGLKMKLEHH 268 (272)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHC------
T ss_pred HHHHHHHHHhcCccHHHHHHHhhhhhccc
Confidence 99999999999999999999888776544
No 27
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-31 Score=225.17 Aligned_cols=304 Identities=17% Similarity=0.139 Sum_probs=252.8
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh---chHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE---TAEEAKSL 78 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~---~~~~~~~~ 78 (349)
+|.++...|++++|+..|+++++..+. +......++..+|.++...|++++|+.++++++...+ +.+.....
T Consensus 15 ~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 15 EGERLCKSGDCRAGVSFFEAAVQVGTE-----DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhcCcc-----cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 578899999999999999999964221 2222236799999999999999999999999987732 23333344
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCccc------HHHHHHHHHHHHhcCC--------------------hHHHHHH
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNPNY------LGVWTLLGHEYMEMKN--------------------TNAAIQC 132 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~--------------------~~~A~~~ 132 (349)
+..++.++...|++++|+.++++++.+.|.. ..++..+|.++...|+ +++|+..
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 169 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDF 169 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 5566677777899999999999999987654 4588999999999999 9999999
Q ss_pred HHHHHHh------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChH------HHHHHHHHHHHhhCHHHHHHH
Q psy9209 133 YRQAIEI------NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPR------MLTALGEAFEKQEKISEAMKC 200 (349)
Q Consensus 133 ~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~A~~~ 200 (349)
+++++.+ .|....++..+|.++...|++++|+.++++++++.|.... ++..+|.++...|++++|+.+
T Consensus 170 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 249 (406)
T 3sf4_A 170 YEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEY 249 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 9999887 3445678999999999999999999999999988665443 889999999999999999999
Q ss_pred HHHHHcccccc------HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHH
Q psy9209 201 YNKSRAIGDAD------GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTA 274 (349)
Q Consensus 201 ~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 274 (349)
+++++...|.. ..++..+|.++...|++++|+..+++++...+. ....+....++..+|.++...|++++|
T Consensus 250 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 250 YKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE---LNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh---cCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999886654 778899999999999999999999999998776 333444688999999999999999999
Q ss_pred HHHHHHHHccc------CChHHHHHHHHHHHHHcCCCCCchhHHH
Q psy9209 275 YKCAQKCLQHE------ETAEEAKSLLRSIAQKRQPDESSSQPME 313 (349)
Q Consensus 275 ~~~~~~a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 313 (349)
+.++++++++. +....++..++.++...|+...+...+.
T Consensus 327 ~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 371 (406)
T 3sf4_A 327 MHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYSTNNSIM 371 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHhHHHHHHHH
Confidence 99999999873 3457788899999999998865444433
No 28
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-31 Score=210.21 Aligned_cols=238 Identities=15% Similarity=0.120 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCccc-------HHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNY-------LGV 112 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-------~~~ 112 (349)
..+..+|.++...|++++|+.+|++++..+ .++.++..+ +.++...|++++|+..++++++..|+. +.+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~---~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 81 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNR---AAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKS 81 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHH---HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHH---HHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHH
Confidence 578889999999999999999999999888 666664444 455566799999999999999988876 688
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhh
Q psy9209 113 WTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQE 192 (349)
Q Consensus 113 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 192 (349)
+..+|.++...|++++|+..|++++.+.|. +.++...|++++|+..+++++..+|.++.++..+|.++...|
T Consensus 82 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3uq3_A 82 FARIGNAYHKLGDLKKTIEYYQKSLTEHRT--------ADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKS 153 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCch--------hHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhc
Confidence 899999999999999999999999998876 456777888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHH
Q psy9209 193 KISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLD 272 (349)
Q Consensus 193 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 272 (349)
++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++...|. .+.++..+|.++...|+++
T Consensus 154 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~l~~~~~~~g~~~ 224 (258)
T 3uq3_A 154 DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN---------FVRAYIRKATAQIAVKEYA 224 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHH---------HHHHHHHHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999999998888 7889999999999999999
Q ss_pred HHHHHHHHHHccc------CChHHHHHHHHHH
Q psy9209 273 TAYKCAQKCLQHE------ETAEEAKSLLRSI 298 (349)
Q Consensus 273 ~A~~~~~~a~~~~------~~~~~~~~~l~~~ 298 (349)
+|+.++++++++. |++..++..++.+
T Consensus 225 ~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 225 SALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 9999999999988 8888888777654
No 29
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.4e-31 Score=214.85 Aligned_cols=241 Identities=12% Similarity=0.076 Sum_probs=220.5
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc----HHHHHHHHHHH
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD----YRAWYGLGQTY 154 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~l~~~~ 154 (349)
+...+..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++ .|.+ ..++..+|.++
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~ 84 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKIL 84 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHH
Confidence 344556677789999999999999999999999999999999999999999999999999 4433 45699999999
Q ss_pred HHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHH
Q psy9209 155 EILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADL 234 (349)
Q Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 234 (349)
...|++++|+.+++++++.+|.++.++..+|.++...|++++|+.+++++++.+|.++.++..+|......+++++|+..
T Consensus 85 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 164 (272)
T 3u4t_A 85 MKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSS 164 (272)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999555555699999999
Q ss_pred HHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC---HHHHHHHHHHHHccc---CC-----hHHHHHHHHHHHHHcC
Q psy9209 235 FMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN---LDTAYKCAQKCLQHE---ET-----AEEAKSLLRSIAQKRQ 303 (349)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~a~~~~---~~-----~~~~~~~l~~~~~~~~ 303 (349)
|+++++..|. ...++..+|.++...|+ +++|+..++++++.. |+ ...++..+|.++...|
T Consensus 165 ~~~a~~~~p~---------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 235 (272)
T 3u4t_A 165 FVKVLELKPN---------IYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINR 235 (272)
T ss_dssp HHHHHHHSTT---------CHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCcc---------chHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcC
Confidence 9999999998 78999999999999999 999999999999875 44 2368889999999999
Q ss_pred CCCCchhHHHHhhhcCCCCCCccccC
Q psy9209 304 PDESSSQPMECAVVLDPVPPSTRSSK 329 (349)
Q Consensus 304 ~~~~A~~~~~~a~~~~p~~~~~~~~~ 329 (349)
++++|+.+|+++++++|+++.++..+
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~a~~~l 261 (272)
T 3u4t_A 236 DKVKADAAWKNILALDPTNKKAIDGL 261 (272)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCccHHHHHHHh
Confidence 99999999999999999999877654
No 30
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.98 E-value=4.5e-31 Score=205.50 Aligned_cols=185 Identities=17% Similarity=0.128 Sum_probs=101.1
Q ss_pred CCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh---------
Q psy9209 87 QPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEIL--------- 157 (349)
Q Consensus 87 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~--------- 157 (349)
...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|+++++++|+++.++..+|.++...
T Consensus 16 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~ 95 (217)
T 2pl2_A 16 YALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRER 95 (217)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcc
Confidence 33455555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred --CCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHH
Q psy9209 158 --RLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLF 235 (349)
Q Consensus 158 --~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 235 (349)
|++++|+..|+++++++|+++.++..+|.++...|++++|+..|+++++++ +++.++..+|.++...|++++|+..|
T Consensus 96 ~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~ 174 (217)
T 2pl2_A 96 GKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHH
Confidence 666666666666666666666666666666666666666666666666555 55556666666666666666666666
Q ss_pred HHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 236 MEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKC 281 (349)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 281 (349)
++++...|+ .+.++..+|.++...|++++|+..++++
T Consensus 175 ~~al~~~P~---------~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 175 AKALEQAPK---------DLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHSTT---------CHHHHHHHHHHHTC--------------
T ss_pred HHHHHhCCC---------ChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 666665555 4555666666666666666666555554
No 31
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.2e-30 Score=207.34 Aligned_cols=230 Identities=12% Similarity=0.092 Sum_probs=216.0
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc-------HHHHHHHH
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD-------YRAWYGLG 151 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~l~ 151 (349)
+..++..+...|++++|+.+|+++++.+ .++.++..+|.++...|++++|+..++++++..|.. +.++..+|
T Consensus 8 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 86 (258)
T 3uq3_A 8 EKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIG 86 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHH
Confidence 4445566666799999999999999999 889999999999999999999999999999998876 79999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHH
Q psy9209 152 QTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAA 231 (349)
Q Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 231 (349)
.++...|++++|+.++++++...|. +.++...|++++|+..+++++..+|..+.++..+|.++...|++++|
T Consensus 87 ~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 87 NAYHKLGDLKKTIEYYQKSLTEHRT--------ADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCC--------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcCch--------hHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999999999887 56788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhH
Q psy9209 232 ADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQP 311 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 311 (349)
+..+++++...|. .+.++..+|.++...|++++|+.+++++++..|+++.++..+|.++...|++++|+..
T Consensus 159 ~~~~~~a~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 229 (258)
T 3uq3_A 159 VKAYTEMIKRAPE---------DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALET 229 (258)
T ss_dssp HHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCcc---------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 9999999999998 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcC------CCCCCcc
Q psy9209 312 MECAVVLD------PVPPSTR 326 (349)
Q Consensus 312 ~~~a~~~~------p~~~~~~ 326 (349)
++++++++ |++..++
T Consensus 230 ~~~a~~~~~~~~~~p~~~~~~ 250 (258)
T 3uq3_A 230 LDAARTKDAEVNNGSSAREID 250 (258)
T ss_dssp HHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHhChhhcCCCchHHHH
Confidence 99999999 7665443
No 32
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.97 E-value=1.2e-29 Score=205.93 Aligned_cols=260 Identities=11% Similarity=0.054 Sum_probs=214.2
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhhhhchH-HHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcC
Q psy9209 46 ANHHLKANNLDTAYKCAQKCLQHEETAE-EAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMK 124 (349)
Q Consensus 46 ~~~~~~~~~~~~A~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 124 (349)
.+..+..|++.+|+..++++...+|++. +....+ +.++...|+++.|+..++. .+|....++..++..+...|
T Consensus 6 ~~~~~~~g~y~~ai~~~~~~~~~~p~~~~e~~~~l---~r~yi~~g~~~~al~~~~~---~~~~~~~a~~~la~~~~~~~ 79 (291)
T 3mkr_A 6 VKNAFYIGSYQQCINEAQRVKPSSPERDVERDVFL---YRAYLAQRKYGVVLDEIKP---SSAPELQAVRMFAEYLASHS 79 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCSHHHHHHHHHHH---HHHHHHTTCHHHHHHHSCT---TSCHHHHHHHHHHHHHHCST
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCchhhHHHHHHH---HHHHHHCCCHHHHHHHhcc---cCChhHHHHHHHHHHHcCCC
Confidence 3456778999999999988888888763 343333 3455556899999887765 25556778888888999999
Q ss_pred ChHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHH
Q psy9209 125 NTNAAIQCYRQAIEI--NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYN 202 (349)
Q Consensus 125 ~~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 202 (349)
++++|++.+++++.. +|+++.+++.+|.++...|++++|+..+++ |.++.++..+|.++..+|++++|+..++
T Consensus 80 ~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~ 154 (291)
T 3mkr_A 80 RRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELK 154 (291)
T ss_dssp THHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 999999999998875 588899999999999999999999998887 7888999999999999999999999999
Q ss_pred HHHccccccHHHHHHHH--HHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy9209 203 KSRAIGDADGKALFKLA--KLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQK 280 (349)
Q Consensus 203 ~a~~~~~~~~~~~~~l~--~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 280 (349)
++++.+|++.......+ .++...|++++|+..|++++...|. .+.+++.+|.++...|++++|...+++
T Consensus 155 ~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~---------~~~~~~~la~~~~~~g~~~eA~~~l~~ 225 (291)
T 3mkr_A 155 KMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSP---------TLLLLNGQAACHMAQGRWEAAEGVLQE 225 (291)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCC---------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99998888764443333 3344568899999999999998887 788999999999999999999999999
Q ss_pred HHcccCChHHHHHHHHHHHHHcCCCCC-chhHHHHhhhcCCCCCCc
Q psy9209 281 CLQHEETAEEAKSLLRSIAQKRQPDES-SSQPMECAVVLDPVPPST 325 (349)
Q Consensus 281 a~~~~~~~~~~~~~l~~~~~~~~~~~~-A~~~~~~a~~~~p~~~~~ 325 (349)
+++.+|++++++..++.++...|+.++ +..+++++++++|+++.+
T Consensus 226 al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~ 271 (291)
T 3mkr_A 226 ALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFI 271 (291)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHH
Confidence 999999999999999999999998876 567889999999988754
No 33
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.97 E-value=2.1e-29 Score=204.61 Aligned_cols=263 Identities=11% Similarity=-0.019 Sum_probs=224.0
Q ss_pred hhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q psy9209 3 NKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 82 (349)
Q Consensus 3 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~ 82 (349)
.+-.+..|+|.+|+..++++. ..+|+.. ......++++|...|+++.|+..++.. +|... ..+..+
T Consensus 6 ~~~~~~~g~y~~ai~~~~~~~------~~~p~~~--~e~~~~l~r~yi~~g~~~~al~~~~~~---~~~~~---~a~~~l 71 (291)
T 3mkr_A 6 VKNAFYIGSYQQCINEAQRVK------PSSPERD--VERDVFLYRAYLAQRKYGVVLDEIKPS---SAPEL---QAVRMF 71 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHSC------CCSHHHH--HHHHHHHHHHHHHTTCHHHHHHHSCTT---SCHHH---HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc------cCCchhh--HHHHHHHHHHHHHCCCHHHHHHHhccc---CChhH---HHHHHH
Confidence 345677899999999887654 2223221 135677899999999999999877652 33333 345556
Q ss_pred HHhcCCCcchHHHHHHHHHHHhh--CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKL--NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLP 160 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 160 (349)
+..+...++.++|++.+++++.. +|+++.+++.+|.++...|++++|+..+++ |.++.++..+|.++..+|++
T Consensus 72 a~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~ 146 (291)
T 3mkr_A 72 AEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRL 146 (291)
T ss_dssp HHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCH
Confidence 66777789999999999999876 699999999999999999999999999998 88999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHH--HHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q psy9209 161 YYGLYYYKQAHMVRPNDPRMLTALG--EAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEF 238 (349)
Q Consensus 161 ~~A~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 238 (349)
++|+..++++++.+|++.......+ .++...|++++|+..|+++++..|+++.+++.+|.++..+|++++|+..|+++
T Consensus 147 ~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~a 226 (291)
T 3mkr_A 147 DLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEA 226 (291)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999999999998765444333 33344589999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHH-HHHHHHHHHcccCChHHHHH
Q psy9209 239 VSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDT-AYKCAQKCLQHEETAEEAKS 293 (349)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~a~~~~~~~~~~~~ 293 (349)
+..+|+ ++.++.++|.++...|+..+ +..+++++++.+|+++.+..
T Consensus 227 l~~~p~---------~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 227 LDKDSG---------HPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHCTT---------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhCCC---------CHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 999999 89999999999999999976 57899999999999987664
No 34
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.97 E-value=1.2e-30 Score=223.34 Aligned_cols=281 Identities=15% Similarity=0.105 Sum_probs=245.1
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHH-HHHHHHHHhcCCCcchHHHHHHHHHHHhh------CcccH
Q psy9209 38 GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAK-SLLRSIAQKRQPDESSSQAVLYFQRALKL------NPNYL 110 (349)
Q Consensus 38 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~ 110 (349)
....+..+|..+...|++++|+..|+++++..|+++... ..+..++.++...|++++|+.++++++.+ .|...
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 126 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEA 126 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHH
Confidence 346788999999999999999999999999999876532 34556666677789999999999999988 56778
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHhCC-----------------HHHHHHHH
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIEI------NNLDYRAWYGLGQTYEILRL-----------------PYYGLYYY 167 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~-----------------~~~A~~~~ 167 (349)
.++..+|.++...|++++|+.+++++++. .+....++..+|.++...|+ +++|+.++
T Consensus 127 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~ 206 (411)
T 4a1s_A 127 KSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFY 206 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHH
Confidence 89999999999999999999999999998 56667899999999999999 99999999
Q ss_pred HHHHhcC------CCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccH------HHHHHHHHHHHhcCcHHHHHHHH
Q psy9209 168 KQAHMVR------PNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADG------KALFKLAKLYDKLNETEAAADLF 235 (349)
Q Consensus 168 ~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~ 235 (349)
++++.+. +....++..+|.++...|++++|+.+++++++..+... .++..+|.++...|++++|+..+
T Consensus 207 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 286 (411)
T 4a1s_A 207 QENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHY 286 (411)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 9998763 23346889999999999999999999999999876543 38899999999999999999999
Q ss_pred HHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC------hHHHHHHHHHHHHHcCCCCCch
Q psy9209 236 MEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET------AEEAKSLLRSIAQKRQPDESSS 309 (349)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~ 309 (349)
++++...+. .........++..+|.++...|++++|+.++++++.+.+. ...++..++.++...|++++|.
T Consensus 287 ~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 363 (411)
T 4a1s_A 287 KRTLALAVE---LGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERAL 363 (411)
T ss_dssp HHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHH---cCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999886 3333445889999999999999999999999999987543 3568889999999999999999
Q ss_pred hHHHHhhhcCCC
Q psy9209 310 QPMECAVVLDPV 321 (349)
Q Consensus 310 ~~~~~a~~~~p~ 321 (349)
.++++++++.+.
T Consensus 364 ~~~~~al~~~~~ 375 (411)
T 4a1s_A 364 KYAEQHLQLAXX 375 (411)
T ss_dssp HHHHHHHHHCCH
T ss_pred HHHHHHHHHHhh
Confidence 999999988765
No 35
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.97 E-value=3.8e-30 Score=219.76 Aligned_cols=280 Identities=15% Similarity=0.142 Sum_probs=242.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHH-HHHHHHHHHhcCCCcchHHHHHHHHHHHhh------CcccHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEA-KSLLRSIAQKRQPDESSSQAVLYFQRALKL------NPNYLGV 112 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~ 112 (349)
..+..+|..+...|++++|+..|++++...|+++.. ...+..++..+...|++++|+.++++++.+ .|....+
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 578899999999999999999999999998887653 234556677777789999999999999887 3455778
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHhCC--------------------HHHHHHH
Q psy9209 113 WTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YRAWYGLGQTYEILRL--------------------PYYGLYY 166 (349)
Q Consensus 113 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~--------------------~~~A~~~ 166 (349)
+..+|.++...|++++|+..+++++++.|.. ..++..+|.++...|+ +++|+.+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 169 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDF 169 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999986654 5589999999999999 9999999
Q ss_pred HHHHHhc------CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccH------HHHHHHHHHHHhcCcHHHHHHH
Q psy9209 167 YKQAHMV------RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADG------KALFKLAKLYDKLNETEAAADL 234 (349)
Q Consensus 167 ~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~ 234 (349)
+++++.+ .|....++..+|.++...|++++|+.+++++++..+... .++..+|.++...|++++|+..
T Consensus 170 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 249 (406)
T 3sf4_A 170 YEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEY 249 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 9999886 333456889999999999999999999999998865543 3899999999999999999999
Q ss_pred HHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC------hHHHHHHHHHHHHHcCCCCCc
Q psy9209 235 FMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET------AEEAKSLLRSIAQKRQPDESS 308 (349)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A 308 (349)
+++++...+. .........++..+|.++...|++++|+.++++++++.+. ...++..+|.++...|++++|
T Consensus 250 ~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 250 YKKTLLLARQ---LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp HHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHh---CcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 9999998887 3334445889999999999999999999999999987543 267888999999999999999
Q ss_pred hhHHHHhhhcCCCC
Q psy9209 309 SQPMECAVVLDPVP 322 (349)
Q Consensus 309 ~~~~~~a~~~~p~~ 322 (349)
+.++++++++.+..
T Consensus 327 ~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 327 MHFAEKHLEISREV 340 (406)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998875443
No 36
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.97 E-value=3.9e-30 Score=213.86 Aligned_cols=280 Identities=15% Similarity=0.126 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHH-HHHHHHHHHhcCCCcchHHHHHHHHHHHhh------CcccHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEA-KSLLRSIAQKRQPDESSSQAVLYFQRALKL------NPNYLGV 112 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~ 112 (349)
..+...|..+...|++++|+..|+++++..|+++.. ...+..++..+...|++++|+.++++++.. .|....+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 467889999999999999999999999998887653 234556677777789999999999999887 4455778
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHhCC--------------------HHHHHHH
Q psy9209 113 WTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YRAWYGLGQTYEILRL--------------------PYYGLYY 166 (349)
Q Consensus 113 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~--------------------~~~A~~~ 166 (349)
+..+|.++...|++++|+..+++++++.+.. ..++..+|.++...|+ +++|+.+
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 165 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDL 165 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999975543 4588999999999999 9999999
Q ss_pred HHHHHhc------CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc------HHHHHHHHHHHHhcCcHHHHHHH
Q psy9209 167 YKQAHMV------RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD------GKALFKLAKLYDKLNETEAAADL 234 (349)
Q Consensus 167 ~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~ 234 (349)
+++++.. .+....++..+|.++...|++++|+.+++++++..+.. ..++..+|.++...|++++|+..
T Consensus 166 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 245 (338)
T 3ro2_A 166 YEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEY 245 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999876 23334688999999999999999999999999885543 34889999999999999999999
Q ss_pred HHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh------HHHHHHHHHHHHHcCCCCCc
Q psy9209 235 FMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA------EEAKSLLRSIAQKRQPDESS 308 (349)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A 308 (349)
+++++...+. .........++..+|.++...|++++|+.++++++...+.. ..++..++.++...|++++|
T Consensus 246 ~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 322 (338)
T 3ro2_A 246 YKKTLLLARQ---LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 322 (338)
T ss_dssp HHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHh---hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHH
Confidence 9999998877 33344458899999999999999999999999999875433 55788999999999999999
Q ss_pred hhHHHHhhhcCCCC
Q psy9209 309 SQPMECAVVLDPVP 322 (349)
Q Consensus 309 ~~~~~~a~~~~p~~ 322 (349)
..++++++++.+..
T Consensus 323 ~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 323 MHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987754
No 37
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.97 E-value=4.7e-29 Score=207.32 Aligned_cols=279 Identities=18% Similarity=0.158 Sum_probs=231.3
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh---chHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE---TAEEAKSL 78 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~---~~~~~~~~ 78 (349)
+|..+...|++++|+..|+++++..+. +......++..+|.++...|++++|+..+++++...+ +.+.....
T Consensus 11 ~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 11 EGERLCKSGDCRAGVSFFEAAVQVGTE-----DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhCcc-----cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 578899999999999999999964221 2222236789999999999999999999999987632 23333344
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCccc------HHHHHHHHHHHHhcCC--------------------hHHHHHH
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNPNY------LGVWTLLGHEYMEMKN--------------------TNAAIQC 132 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~--------------------~~~A~~~ 132 (349)
+..++..+...|++++|+..++++++..|.. ..++..+|.++...|+ +++|+..
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 165 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDL 165 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 5666677777899999999999999886543 3488999999999999 9999999
Q ss_pred HHHHHHh------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh------HHHHHHHHHHHHhhCHHHHHHH
Q psy9209 133 YRQAIEI------NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP------RMLTALGEAFEKQEKISEAMKC 200 (349)
Q Consensus 133 ~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~ 200 (349)
+++++.. .+....++..+|.++...|++++|+.+++++++..+... .++..+|.++...|++++|+.+
T Consensus 166 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 245 (338)
T 3ro2_A 166 YEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEY 245 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999886 334467899999999999999999999999998755433 3889999999999999999999
Q ss_pred HHHHHcccccc------HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHH
Q psy9209 201 YNKSRAIGDAD------GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTA 274 (349)
Q Consensus 201 ~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 274 (349)
+++++...+.. ..++..+|.++...|++++|+..+++++...+. .........++..+|.++...|++++|
T Consensus 246 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A 322 (338)
T 3ro2_A 246 YKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE---LKDRIGEGRACWSLGNAYTALGNHDQA 322 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh---cCCcHHHHHHHHHHHHHHHHcCChHHH
Confidence 99999886654 678899999999999999999999999998776 223444577899999999999999999
Q ss_pred HHHHHHHHcccCCh
Q psy9209 275 YKCAQKCLQHEETA 288 (349)
Q Consensus 275 ~~~~~~a~~~~~~~ 288 (349)
..++++++++.+..
T Consensus 323 ~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 323 MHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887643
No 38
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.97 E-value=5.1e-29 Score=213.30 Aligned_cols=280 Identities=15% Similarity=0.124 Sum_probs=235.2
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh---chHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE---TAEEAKSL 78 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~---~~~~~~~~ 78 (349)
.|..+...|++++|+..|+++++..+. +......++..+|.++...|++++|+..+++++.... +.+.....
T Consensus 54 ~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 128 (411)
T 4a1s_A 54 EGERLCNAGDCRAGVAFFQAAIQAGTE-----DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKS 128 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHhccc-----ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHH
Confidence 467889999999999999999964221 2222235799999999999999999999999998721 12233334
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhh------CcccHHHHHHHHHHHHhcCC-----------------hHHHHHHHHH
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKL------NPNYLGVWTLLGHEYMEMKN-----------------TNAAIQCYRQ 135 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~-----------------~~~A~~~~~~ 135 (349)
+..++..+...|++++|+.++++++.. .|....++..+|.++...|+ +++|+.++++
T Consensus 129 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 208 (411)
T 4a1s_A 129 SGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQE 208 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHH
Confidence 555666677789999999999999988 56667789999999999999 9999999999
Q ss_pred HHHhC------cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChH------HHHHHHHHHHHhhCHHHHHHHHHH
Q psy9209 136 AIEIN------NLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPR------MLTALGEAFEKQEKISEAMKCYNK 203 (349)
Q Consensus 136 a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~A~~~~~~ 203 (349)
++++. +....++..+|.++...|++++|+.++++++++.+.... ++..+|.++...|++++|+.++++
T Consensus 209 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 288 (411)
T 4a1s_A 209 NLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKR 288 (411)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 98863 334668999999999999999999999999998765443 889999999999999999999999
Q ss_pred HHcccccc------HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHH
Q psy9209 204 SRAIGDAD------GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKC 277 (349)
Q Consensus 204 a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 277 (349)
++...+.. ..++..+|.++...|++++|+.++++++...+. .........++..+|.++...|++++|..+
T Consensus 289 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 365 (411)
T 4a1s_A 289 TLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE---LGDRIGEARACWSLGNAHSAIGGHERALKY 365 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---CCChHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 99987643 678899999999999999999999999998776 223344577999999999999999999999
Q ss_pred HHHHHcccCChH
Q psy9209 278 AQKCLQHEETAE 289 (349)
Q Consensus 278 ~~~a~~~~~~~~ 289 (349)
+++++++.+...
T Consensus 366 ~~~al~~~~~~~ 377 (411)
T 4a1s_A 366 AEQHLQLAXXXX 377 (411)
T ss_dssp HHHHHHHCCHHH
T ss_pred HHHHHHHHhhcc
Confidence 999999876543
No 39
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.97 E-value=1.3e-28 Score=195.27 Aligned_cols=215 Identities=14% Similarity=0.136 Sum_probs=143.4
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR 158 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 158 (349)
+..++..+...|++++|+..|+++++.+|.++.++..+|.++...|++++|+..++++++..|.+..++..+|.++...|
T Consensus 26 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 105 (243)
T 2q7f_A 26 GGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKE 105 (243)
T ss_dssp ----------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc
Confidence 33444555566677777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q psy9209 159 LPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEF 238 (349)
Q Consensus 159 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 238 (349)
++++|+.+++++++..|.++.++..+|.++...|++++|+..++++++..|.++.++..+|.++...|++++|+..++++
T Consensus 106 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 185 (243)
T 2q7f_A 106 MYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAV 185 (243)
T ss_dssp CHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHc
Q psy9209 239 VSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKR 302 (349)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 302 (349)
+...|. ...++..+|.++...|++++|+.+++++++..|+++.++..++.+....
T Consensus 186 ~~~~~~---------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l~~~~ 240 (243)
T 2q7f_A 186 TEQDPG---------HADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLLGHHH 240 (243)
T ss_dssp HHHCTT---------CHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC-----
T ss_pred HHhCcc---------cHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHHHHhhc
Confidence 777666 5667777777777777777777777777777777777776666554433
No 40
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.96 E-value=2.4e-28 Score=197.45 Aligned_cols=255 Identities=13% Similarity=0.026 Sum_probs=215.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhh----hhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHH
Q psy9209 45 LANHHLKANNLDTAYKCAQKCLQH----EETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEY 120 (349)
Q Consensus 45 l~~~~~~~~~~~~A~~~~~~~l~~----~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 120 (349)
++......|++++|+..+++++.. .|.++.++ ..++..+...|++++|+..|+++++.+|+++.++..+|.++
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~ 87 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRALTDDERAQLL---YERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYL 87 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHH---HHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred eeeccCccchHHHHHHHHHHHHhcccccCchhHHHH---HHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 444556678999999999999987 45555554 44555566679999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKC 200 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 200 (349)
...|++++|+.+|+++++.+|.++.++..+|.++...|++++|+.+++++++..|+++......+.+ ...|++++|+..
T Consensus 88 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~ 166 (275)
T 1xnf_A 88 TQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEV 166 (275)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998766666544 677999999999
Q ss_pred HHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy9209 201 YNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQK 280 (349)
Q Consensus 201 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 280 (349)
+++++...|.+...+. ++.++...++.++|+..+++++...|.. .+....++..+|.++...|++++|+.+|++
T Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 240 (275)
T 1xnf_A 167 LKQHFEKSDKEQWGWN-IVEFYLGNISEQTLMERLKADATDNTSL-----AEHLSETNFYLGKYYLSLGDLDSATALFKL 240 (275)
T ss_dssp HHHHHHHSCCCSTHHH-HHHHHTTSSCHHHHHHHHHHHCCSHHHH-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcCCcchHHHH-HHHHHHHhcCHHHHHHHHHHHhcccccc-----cccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999887766654 7778888899999999999999887751 122478999999999999999999999999
Q ss_pred HHcccCChHHHHHHHHHHHHHcCCCCCchhHH
Q psy9209 281 CLQHEETAEEAKSLLRSIAQKRQPDESSSQPM 312 (349)
Q Consensus 281 a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 312 (349)
++..+|++... .+.++...|++++|++.+
T Consensus 241 al~~~p~~~~~---~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 241 AVANNVHNFVE---HRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HHTTCCTTCHH---HHHHHHHHHHHHHC----
T ss_pred HHhCCchhHHH---HHHHHHHHHHHHhhHHHH
Confidence 99999976443 366777888888888877
No 41
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.96 E-value=7.1e-28 Score=182.77 Aligned_cols=174 Identities=18% Similarity=0.244 Sum_probs=154.1
Q ss_pred ccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q psy9209 108 NYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEA 187 (349)
Q Consensus 108 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 187 (349)
+++.+|+.+|.++...|++++|+..|+++++++|+++.++..+|.++...|++++|+..+.+++...|+++.++..+|.+
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred HHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH
Q psy9209 188 FEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK 267 (349)
Q Consensus 188 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 267 (349)
+...++++.|...+.+++...|.++.++..+|.++..+|++++|+..|+++++.+|. .+.++..+|.++..
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~---------~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG---------FIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch---------hhhHHHHHHHHHHH
Confidence 999999999999999999989988889999999999999999999999999998888 78888999999999
Q ss_pred hCCHHHHHHHHHHHHcccCChHH
Q psy9209 268 ANNLDTAYKCAQKCLQHEETAEE 290 (349)
Q Consensus 268 ~g~~~~A~~~~~~a~~~~~~~~~ 290 (349)
+|++++|+.+|+++++++|+++.
T Consensus 154 ~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 154 KGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCccCHH
Confidence 99999999999999988887643
No 42
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.96 E-value=8.8e-28 Score=191.69 Aligned_cols=205 Identities=16% Similarity=0.097 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFE 189 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 189 (349)
+.++..+|.++...|++++|+..|+++++.+|.+..++..+|.++...|++++|+..++++++..|.++.++..+|.++.
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 34444444444444455555555544444444444444444444444455555555555444444444444444444444
Q ss_pred HhhCHHHHHHHHHHHHc--cccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH
Q psy9209 190 KQEKISEAMKCYNKSRA--IGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK 267 (349)
Q Consensus 190 ~~~~~~~A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 267 (349)
..|++++|+.++++++. ..|.++.++..+|.++...|++++|+..+++++...|. ...++..+|.++..
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~---------~~~~~~~la~~~~~ 187 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN---------QPSVALEMADLLYK 187 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC---------CHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc---------cHHHHHHHHHHHHH
Confidence 44555555555544444 44444444444444444455555555555554444444 34444444555555
Q ss_pred hCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCC
Q psy9209 268 ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPP 323 (349)
Q Consensus 268 ~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 323 (349)
.|++++|+.+++++++..|.....+..++.++...|++++|...++++++..|+++
T Consensus 188 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 243 (252)
T 2ho1_A 188 EREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSL 243 (252)
T ss_dssp TTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSH
T ss_pred cCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCH
Confidence 55555555555554444444444444444444444555555555555444444443
No 43
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.96 E-value=1.4e-28 Score=213.55 Aligned_cols=215 Identities=12% Similarity=0.047 Sum_probs=206.4
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCCh-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNT-NAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYK 168 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 168 (349)
+.+++++..+.+.....|..+.+++.+|.++...|++ ++|+..|+++++.+|.++.+|..+|.+|...|++++|+.+|+
T Consensus 82 ~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 161 (474)
T 4abn_A 82 EEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFS 161 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4578888899998999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHh---------hCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc--------CcHHHH
Q psy9209 169 QAHMVRPNDPRMLTALGEAFEKQ---------EKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL--------NETEAA 231 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~--------~~~~~A 231 (349)
++++++|+ ..++..+|.++... |++++|+..|+++++.+|+++.++..+|.++... |++++|
T Consensus 162 ~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A 240 (474)
T 4abn_A 162 GALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQA 240 (474)
T ss_dssp HHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 99999999 79999999999999 9999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHhccc---ccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCc
Q psy9209 232 ADLFMEFVSKLD---TFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESS 308 (349)
Q Consensus 232 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 308 (349)
+..|++++.++| . .+.++..+|.++...|++++|+..|+++++++|++..++..++.++...|++++|
T Consensus 241 ~~~~~~al~~~p~~~~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 241 LSAYAQAEKVDRKASS---------NPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp HHHHHHHHHHCGGGGG---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccc---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 6 7999999999999999999999999999999999999999999999999999888
Q ss_pred hhHHHH
Q psy9209 309 SQPMEC 314 (349)
Q Consensus 309 ~~~~~~ 314 (349)
+..+.+
T Consensus 312 i~~~~~ 317 (474)
T 4abn_A 312 LESKGK 317 (474)
T ss_dssp HHHTTT
T ss_pred HHHhcc
Confidence 876544
No 44
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.96 E-value=2.1e-28 Score=194.17 Aligned_cols=212 Identities=15% Similarity=0.097 Sum_probs=186.2
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
.+..++.+|.++...|++++|+..|+++++.+|.+..++..+|.++...|++++|+..++++++..|.++.++..+|.++
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 101 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVY 101 (243)
T ss_dssp --------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHh
Q psy9209 189 EKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA 268 (349)
Q Consensus 189 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (349)
...|++++|+..++++++..|.++.++..+|.++...|++++|+..+++++...|. ...++..+|.++...
T Consensus 102 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~ 172 (243)
T 2q7f_A 102 VVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN---------DTEARFQFGMCLANE 172 (243)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc---------cHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999988 789999999999999
Q ss_pred CCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCccccC
Q psy9209 269 NNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTRSSK 329 (349)
Q Consensus 269 g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 329 (349)
|++++|+..++++++..|++..++..++.++...|++++|+..++++++++|+++.++..+
T Consensus 173 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~ 233 (243)
T 2q7f_A 173 GMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAK 233 (243)
T ss_dssp TCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998766543
No 45
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.96 E-value=1.1e-26 Score=190.84 Aligned_cols=222 Identities=10% Similarity=0.012 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHh-------cCCh-------HHHHHHHHHHHH-hCcccHHHHHHHHHHHHHh
Q psy9209 93 SQAVLYFQRALKLNPNYLGVWTLLGHEYME-------MKNT-------NAAIQCYRQAIE-INNLDYRAWYGLGQTYEIL 157 (349)
Q Consensus 93 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-------~~~~-------~~A~~~~~~a~~-~~~~~~~~~~~l~~~~~~~ 157 (349)
++|+..|++++..+|.++.+|+.+|..+.. .|++ ++|+..|+++++ ++|++..+|..+|.++...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 455566666666666666666666655542 3554 566666666666 4666666666666666666
Q ss_pred CCHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHH-hcCcHHHHHHHH
Q psy9209 158 RLPYYGLYYYKQAHMVRPNDPR-MLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYD-KLNETEAAADLF 235 (349)
Q Consensus 158 ~~~~~A~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~ 235 (349)
|++++|...|+++++..|.++. +|..+|.++...|++++|+..|+++++..|....++...+.+.. ..|++++|+..|
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~ 192 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIF 192 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 6666666666666666665554 56666666666666666666666666666655555554444432 246666666666
Q ss_pred HHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc---cC-ChHHHHHHHHHHHHHcCCCCCchhH
Q psy9209 236 MEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH---EE-TAEEAKSLLRSIAQKRQPDESSSQP 311 (349)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~---~~-~~~~~~~~l~~~~~~~~~~~~A~~~ 311 (349)
++++...|. .+.+|..+|.++...|++++|+..|++++.. .| ....+|..++.+....|+.++|...
T Consensus 193 ~~al~~~p~---------~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~ 263 (308)
T 2ond_A 193 ELGLKKYGD---------IPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKV 263 (308)
T ss_dssp HHHHHHHTT---------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHhCCC---------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 666666655 4566666666666666666666666666653 33 2455555556666666666666666
Q ss_pred HHHhhhcCCCCC
Q psy9209 312 MECAVVLDPVPP 323 (349)
Q Consensus 312 ~~~a~~~~p~~~ 323 (349)
++++++..|++.
T Consensus 264 ~~~a~~~~p~~~ 275 (308)
T 2ond_A 264 EKRRFTAFREEY 275 (308)
T ss_dssp HHHHHHHTTTTT
T ss_pred HHHHHHHccccc
Confidence 666666666544
No 46
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.96 E-value=2.7e-27 Score=185.37 Aligned_cols=197 Identities=18% Similarity=0.116 Sum_probs=106.9
Q ss_pred CCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh-CCHHHHHHH
Q psy9209 88 PDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEIL-RLPYYGLYY 166 (349)
Q Consensus 88 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~ 166 (349)
..|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++..|.+..++..+|.++... |++++|+.+
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~ 99 (225)
T 2vq2_A 20 RGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAY 99 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3455555555555555555555555555555555555555555555555555555555555555555555 555555555
Q ss_pred HHHHHh--cCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhccc-
Q psy9209 167 YKQAHM--VRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLD- 243 (349)
Q Consensus 167 ~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~- 243 (349)
++++++ ..|.+..++..+|.++...|++++|+.+++++++..|.++.++..+|.++...|++++|+..+++++...|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 179 (225)
T 2vq2_A 100 FDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEV 179 (225)
T ss_dssp HHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 555555 33444455555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHH
Q psy9209 244 TFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKS 293 (349)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 293 (349)
. ....+..++.++...|+.++|..+++.+.+..|+++.+..
T Consensus 180 ~---------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~~~ 220 (225)
T 2vq2_A 180 L---------QADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEELQT 220 (225)
T ss_dssp C---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred C---------CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4 3444555555555555555555555555555555544443
No 47
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.96 E-value=1.6e-27 Score=202.08 Aligned_cols=308 Identities=13% Similarity=0.082 Sum_probs=237.6
Q ss_pred hHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHH--HHHHHHhcCCHHHHH-----------HHHHHHhhhhhc
Q psy9209 5 LYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKY--LANHHLKANNLDTAY-----------KCAQKCLQHEET 71 (349)
Q Consensus 5 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~A~-----------~~~~~~l~~~~~ 71 (349)
.+...+++++|..+++++.+.++....+++- ..++. ..+.....++++.+. ..++++-. .|.
T Consensus 21 ~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~----~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~-~~~ 95 (383)
T 3ulq_A 21 MYIRRFSIPDAEYLRREIKQELDQMEEDQDL----HLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDK-KQA 95 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSCCCHHH----HHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHHHH-HTH
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHhhccchHH----HHHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHHHh-cCC
Confidence 3567899999999999987655443222211 12222 222233344444444 55555432 222
Q ss_pred hHH---HHHHHHHHHHhcCCCcchHHHHHHHHHHHhh------CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC--
Q psy9209 72 AEE---AKSLLRSIAQKRQPDESSSQAVLYFQRALKL------NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEIN-- 140 (349)
Q Consensus 72 ~~~---~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-- 140 (349)
... ....+...|..+...|++++|+.++++++++ .+..+.++..+|.++...|++++|+.++++++++.
T Consensus 96 ~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~ 175 (383)
T 3ulq_A 96 RLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKE 175 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 222 1223344566677789999999999999987 22356789999999999999999999999999973
Q ss_pred -----cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh------HHHHHHHHHHHHhhCHHHHHHHHHHHHc---
Q psy9209 141 -----NLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP------RMLTALGEAFEKQEKISEAMKCYNKSRA--- 206 (349)
Q Consensus 141 -----~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~a~~--- 206 (349)
+....++..+|.++...|++++|+.++++++++.+... .++.++|.+|...|++++|+.+++++++
T Consensus 176 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 176 HEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 33456899999999999999999999999998855433 5889999999999999999999999999
Q ss_pred --cc-cccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC---HHHHHHHHHH
Q psy9209 207 --IG-DADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN---LDTAYKCAQK 280 (349)
Q Consensus 207 --~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~ 280 (349)
.+ |..+.++..+|.++..+|++++|+..+++++...+.. . .+.....+..+|.++...|+ +++|+..+++
T Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~-~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 331 (383)
T 3ulq_A 256 ESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA---G-DVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLES 331 (383)
T ss_dssp HTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---T-CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred hhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---C-CHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45 7788999999999999999999999999999986541 1 11133446779999999999 8888888888
Q ss_pred HHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 281 CLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 281 a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
. ...|....++..+|.++...|++++|..+|++++++...-
T Consensus 332 ~-~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i 372 (383)
T 3ulq_A 332 K-MLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLI 372 (383)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSC
T ss_pred C-cCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Confidence 6 4456677888999999999999999999999999876553
No 48
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.96 E-value=4.9e-28 Score=183.66 Aligned_cols=174 Identities=13% Similarity=0.078 Sum_probs=169.0
Q ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHH
Q psy9209 142 LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKL 221 (349)
Q Consensus 142 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 221 (349)
+++.+|+++|.++...|++++|+..|+++++++|+++.++..+|.++...|++++|+..+++++...|..+.++..+|.+
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH
Q psy9209 222 YDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK 301 (349)
Q Consensus 222 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 301 (349)
+...++++.|...+.+++...|. ...++..+|.++...|++++|+..|+++++.+|+++.++..+|.++..
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTV---------YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCcc---------chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 99999999999999999999998 799999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHhhhcCCCCCC
Q psy9209 302 RQPDESSSQPMECAVVLDPVPPS 324 (349)
Q Consensus 302 ~~~~~~A~~~~~~a~~~~p~~~~ 324 (349)
+|++++|+.+|+++++++|+++.
T Consensus 154 ~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 154 KGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCccCHH
Confidence 99999999999999999998754
No 49
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.96 E-value=9.9e-27 Score=185.58 Aligned_cols=208 Identities=15% Similarity=0.102 Sum_probs=180.4
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR 158 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 158 (349)
+..++..+...|++++|+..++++++.+|.++.++..+|.++...|++++|+..++++++..|.+..++..+|.++...|
T Consensus 40 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 119 (252)
T 2ho1_A 40 YIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQK 119 (252)
T ss_dssp HHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh
Confidence 33444445556888888888888888888888888999999999999999999999999988888888999999999999
Q ss_pred CHHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy9209 159 LPYYGLYYYKQAHM--VRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFM 236 (349)
Q Consensus 159 ~~~~A~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 236 (349)
++++|+.++++++. ..|.++.++..+|.++...|++++|+.+++++++..|.++.++..+|.++...|++++|+..++
T Consensus 120 ~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 199 (252)
T 2ho1_A 120 RYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYD 199 (252)
T ss_dssp CHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999988 7788888888999999999999999999999999888888899999999999999999999999
Q ss_pred HHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHH
Q psy9209 237 EFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLL 295 (349)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l 295 (349)
+++...|. ...++..++.++...|++++|..+++++++..|+++.+...+
T Consensus 200 ~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 249 (252)
T 2ho1_A 200 LFAQGGGQ---------NARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQ 249 (252)
T ss_dssp HHHTTSCC---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHHHHHHH
T ss_pred HHHHhCcC---------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 99888887 688888899999999999999999999999888887766543
No 50
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.96 E-value=2.3e-27 Score=191.75 Aligned_cols=232 Identities=12% Similarity=-0.034 Sum_probs=209.3
Q ss_pred HhcCCCcchHHHHHHHHHHHhh----CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCC
Q psy9209 84 QKRQPDESSSQAVLYFQRALKL----NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRL 159 (349)
Q Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 159 (349)
......|++++|+..++++++. .|.++.++..+|.++...|++++|+..|+++++.+|.++.++..+|.++...|+
T Consensus 13 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 13 VPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 92 (275)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred eccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC
Confidence 3456679999999999999997 356788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy9209 160 PYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFV 239 (349)
Q Consensus 160 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 239 (349)
+++|+.+|+++++..|.++.++..+|.++...|++++|+.+++++++..|.++.....++.+ ...|++++|+..+++++
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~ 171 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHF 171 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988766666544 66799999999999999
Q ss_pred hcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh----HHHHHHHHHHHHHcCCCCCchhHHHHh
Q psy9209 240 SKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA----EEAKSLLRSIAQKRQPDESSSQPMECA 315 (349)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a 315 (349)
...|. .... ..++.++...++.++|+..+++++...|.. ..++..+|.++...|++++|+..|+++
T Consensus 172 ~~~~~---------~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 241 (275)
T 1xnf_A 172 EKSDK---------EQWG-WNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLA 241 (275)
T ss_dssp HHSCC---------CSTH-HHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCc---------chHH-HHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 98887 3333 457888889999999999999999887743 788999999999999999999999999
Q ss_pred hhcCCCCCCcc
Q psy9209 316 VVLDPVPPSTR 326 (349)
Q Consensus 316 ~~~~p~~~~~~ 326 (349)
++++|++....
T Consensus 242 l~~~p~~~~~~ 252 (275)
T 1xnf_A 242 VANNVHNFVEH 252 (275)
T ss_dssp HTTCCTTCHHH
T ss_pred HhCCchhHHHH
Confidence 99999876543
No 51
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.96 E-value=4e-26 Score=184.29 Aligned_cols=218 Identities=18% Similarity=0.174 Sum_probs=148.0
Q ss_pred cCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----h
Q psy9209 86 RQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYME----MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI----L 157 (349)
Q Consensus 86 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~ 157 (349)
+...|++++|+.+|+++++ |.++.++..+|.++.. .+++++|+.+|+++++.+ ++.++..+|.+|.. .
T Consensus 16 ~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~ 91 (273)
T 1ouv_A 16 SYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVS 91 (273)
T ss_dssp HHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSC
T ss_pred HHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcc
Confidence 3334666666666666665 5555666667777766 677777777777776653 56666677777776 6
Q ss_pred CCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH----hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHh----cCcHH
Q psy9209 158 RLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK----QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDK----LNETE 229 (349)
Q Consensus 158 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~ 229 (349)
+++++|+.+|+++++. +++.++..+|.+|.. .+++++|+.+|+++++.. ++.++..+|.++.. .++++
T Consensus 92 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~ 167 (273)
T 1ouv_A 92 QNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLK 167 (273)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHH
T ss_pred cCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHH
Confidence 7777777777777665 356667777777776 677777777777777654 45666677777766 67777
Q ss_pred HHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH----hCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH----
Q psy9209 230 AAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK----ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK---- 301 (349)
Q Consensus 230 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~---- 301 (349)
+|+.+|+++++.. .+.++..+|.++.. .+++++|+.+|+++++..| +.++..++.++..
T Consensus 168 ~A~~~~~~a~~~~-----------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~ 234 (273)
T 1ouv_A 168 KALASYDKACDLK-----------DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGV 234 (273)
T ss_dssp HHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHCC-----------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCc
Confidence 7777777776652 35666777777777 7777777777777776654 5666777777776
Q ss_pred cCCCCCchhHHHHhhhcCCCCCC
Q psy9209 302 RQPDESSSQPMECAVVLDPVPPS 324 (349)
Q Consensus 302 ~~~~~~A~~~~~~a~~~~p~~~~ 324 (349)
.+++++|+.+|+++++..|++..
T Consensus 235 ~~~~~~A~~~~~~a~~~~~~~a~ 257 (273)
T 1ouv_A 235 TRNEKQAIENFKKGCKLGAKGAC 257 (273)
T ss_dssp SCCSTTHHHHHHHHHHHTCHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHH
Confidence 77777777777777777766543
No 52
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.96 E-value=4.4e-26 Score=178.42 Aligned_cols=211 Identities=17% Similarity=0.111 Sum_probs=158.7
Q ss_pred CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q psy9209 106 NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALG 185 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 185 (349)
.|.++.++..+|.++...|++++|+..++++++..|.++.++..+|.++...|++++|+.++++++...|.++.++..+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 83 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYG 83 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 46666777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHh-hCHHHHHHHHHHHHc--cccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHH
Q psy9209 186 EAFEKQ-EKISEAMKCYNKSRA--IGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLA 262 (349)
Q Consensus 186 ~~~~~~-~~~~~A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (349)
.++... |++++|+.+++++++ ..|....++..+|.++...|++++|+..+++++...|. ...++..+|
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~la 154 (225)
T 2vq2_A 84 WFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ---------FPPAFKELA 154 (225)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------CHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------CchHHHHHH
Confidence 777777 777777777777777 55556677777777777777777777777777777776 567777777
Q ss_pred HHHHHhCCHHHHHHHHHHHHcccC-ChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCc
Q psy9209 263 NHHLKANNLDTAYKCAQKCLQHEE-TAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPST 325 (349)
Q Consensus 263 ~~~~~~g~~~~A~~~~~~a~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 325 (349)
.++...|++++|+.+++++++..| .+...+..++.++...|+.++|..+++.+.+.+|+++..
T Consensus 155 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~ 218 (225)
T 2vq2_A 155 RTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEEL 218 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHHH
Confidence 777777777777777777777777 777777777777777777777777777777777776543
No 53
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.96 E-value=3.2e-27 Score=204.93 Aligned_cols=215 Identities=15% Similarity=0.141 Sum_probs=200.1
Q ss_pred CHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcch-HHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHH
Q psy9209 54 NLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESS-SQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQC 132 (349)
Q Consensus 54 ~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 132 (349)
.+++++..+++.....|.....+. .++..+...|++ ++|+..|+++++.+|+++.++..+|.+|...|++++|+.+
T Consensus 83 ~~~~al~~l~~~~~~~~~~a~~~~---~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~ 159 (474)
T 4abn_A 83 EMEKTLQQMEEVLGSAQVEAQALM---LKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTC 159 (474)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHH---HHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccCchhHHHHH---HHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 356677777777777787777754 445667778999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHh---------CCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh--------hCHH
Q psy9209 133 YRQAIEINNLDYRAWYGLGQTYEIL---------RLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQ--------EKIS 195 (349)
Q Consensus 133 ~~~a~~~~~~~~~~~~~l~~~~~~~---------~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~ 195 (349)
|+++++++|+ ..++..+|.++... |++++|+..|+++++++|+++.+|..+|.++... |+++
T Consensus 160 ~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~ 238 (474)
T 4abn_A 160 FSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQ 238 (474)
T ss_dssp HHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHH
Confidence 9999999998 79999999999999 9999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcccc---ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHH
Q psy9209 196 EAMKCYNKSRAIGD---ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLD 272 (349)
Q Consensus 196 ~A~~~~~~a~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 272 (349)
+|+.+|+++++++| .++.+++.+|.++...|++++|+..|++++..+|. ...++..++.++...|+++
T Consensus 239 ~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---------~~~a~~~l~~~~~~lg~~~ 309 (474)
T 4abn_A 239 QALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPA---------WPEPQQREQQLLEFLSRLT 309 (474)
T ss_dssp HHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHHH
Q psy9209 273 TAYKCAQKC 281 (349)
Q Consensus 273 ~A~~~~~~a 281 (349)
+|+..+.+.
T Consensus 310 eAi~~~~~~ 318 (474)
T 4abn_A 310 SLLESKGKT 318 (474)
T ss_dssp HHHHHTTTC
T ss_pred HHHHHhccc
Confidence 999877654
No 54
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.96 E-value=2.5e-26 Score=188.62 Aligned_cols=253 Identities=11% Similarity=0.038 Sum_probs=217.3
Q ss_pred HHHHHHHHHHhhhhhchHHHHHHHHHHHHhc----CCCcch-------HHHHHHHHHHHh-hCcccHHHHHHHHHHHHhc
Q psy9209 56 DTAYKCAQKCLQHEETAEEAKSLLRSIAQKR----QPDESS-------SQAVLYFQRALK-LNPNYLGVWTLLGHEYMEM 123 (349)
Q Consensus 56 ~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~----~~~~~~-------~~A~~~~~~~~~-~~~~~~~~~~~la~~~~~~ 123 (349)
++|+..|++++..+|+++.+|..++.+.... ...|++ ++|+..|+++++ ++|++..+|..+|.++...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 7899999999999999999998887664321 123665 999999999999 7999999999999999999
Q ss_pred CChHHHHHHHHHHHHhCcccHH-HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH-hhCHHHHHHHH
Q psy9209 124 KNTNAAIQCYRQAIEINNLDYR-AWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK-QEKISEAMKCY 201 (349)
Q Consensus 124 ~~~~~A~~~~~~a~~~~~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 201 (349)
|++++|...|++++++.|.++. +|..+|.++...|++++|+..|+++++..|....++...+.+... .|++++|+.+|
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~ 192 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIF 192 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999886 999999999999999999999999999999998888777666544 69999999999
Q ss_pred HHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc---ccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHH
Q psy9209 202 NKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSK---LDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCA 278 (349)
Q Consensus 202 ~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 278 (349)
+++++..|+++.+|..+|.++...|++++|+..|++++.. .|+ ....+|..++..+...|++++|...+
T Consensus 193 ~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~--------~~~~l~~~~~~~~~~~g~~~~a~~~~ 264 (308)
T 2ond_A 193 ELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE--------KSGEIWARFLAFESNIGDLASILKVE 264 (308)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGG--------GCHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHH--------HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999996 332 15789999999999999999999999
Q ss_pred HHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCcccc
Q psy9209 279 QKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPSTRSS 328 (349)
Q Consensus 279 ~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 328 (349)
+++++..|++...... +.+.. . .+.+.++|+++....-
T Consensus 265 ~~a~~~~p~~~~~~~~-~~~~~---r--------~~~l~~~P~~~~~ln~ 302 (308)
T 2ond_A 265 KRRFTAFREEYEGKET-ALLVD---R--------YKFMDLYPCSASELKA 302 (308)
T ss_dssp HHHHHHTTTTTSSCHH-HHHHT---T--------TCBTTBCSSCHHHHHT
T ss_pred HHHHHHcccccccchH-HHHHH---H--------HHhcccCCCCHHHHHh
Confidence 9999999975433211 22211 1 1567788888776543
No 55
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.95 E-value=1.6e-25 Score=180.83 Aligned_cols=229 Identities=19% Similarity=0.205 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCC----CcchHHHHHHHHHHHhhCcccHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQP----DESSSQAVLYFQRALKLNPNYLGVWTL 115 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~ 115 (349)
.+++.+|..+...|++++|+.+|+++++ |+++.++..++ ..+.. .+++++|+.+|+++++.+ ++.++..
T Consensus 7 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg---~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~ 79 (273)
T 1ouv_A 7 KELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLG---VLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHL 79 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHH---HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHH---HHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHH
Confidence 5789999999999999999999999998 66666655555 44555 799999999999999886 7899999
Q ss_pred HHHHHHh----cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q psy9209 116 LGHEYME----MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI----LRLPYYGLYYYKQAHMVRPNDPRMLTALGEA 187 (349)
Q Consensus 116 la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 187 (349)
+|.++.. .+++++|+..|+++++.+ ++.++..+|.+|.. .+++++|+.+|+++++.. ++.++..+|.+
T Consensus 80 lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~ 155 (273)
T 1ouv_A 80 LGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSL 155 (273)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred HHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHH
Confidence 9999999 999999999999999874 78999999999999 999999999999999975 68899999999
Q ss_pred HHH----hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHH
Q psy9209 188 FEK----QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDK----LNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFK 259 (349)
Q Consensus 188 ~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (349)
+.. .+++++|+.+|+++++.. ++.++..+|.++.. .+++++|+.+|+++++..+ +.++.
T Consensus 156 ~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~-----------~~a~~ 222 (273)
T 1ouv_A 156 YDAGRGTPKDLKKALASYDKACDLK--DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN-----------GGGCF 222 (273)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC-----------HHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC-----------HHHHH
Confidence 999 999999999999999874 57899999999999 9999999999999998743 67899
Q ss_pred HHHHHHHH----hCCHHHHHHHHHHHHcccCChHHHH
Q psy9209 260 YLANHHLK----ANNLDTAYKCAQKCLQHEETAEEAK 292 (349)
Q Consensus 260 ~l~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~ 292 (349)
.+|.++.. .+++++|+.+|+++++..|+....+
T Consensus 223 ~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~ 259 (273)
T 1ouv_A 223 NLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 259 (273)
T ss_dssp HHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999 9999999999999999988765443
No 56
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.95 E-value=2e-25 Score=197.14 Aligned_cols=298 Identities=16% Similarity=0.150 Sum_probs=238.6
Q ss_pred HhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHH---
Q psy9209 7 DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIA--- 83 (349)
Q Consensus 7 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~--- 83 (349)
...|++++|..+|+++++..|... .+|...+..+...|++++|...|++++...|+ ...|..+....
T Consensus 23 ~~~~~~~~a~~~~e~al~~~P~~~---------~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~-~~lw~~~~~~~~~~ 92 (530)
T 2ooe_A 23 AQNQPIDKARKTYERLVAQFPSSG---------RFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLH-IDLWKCYLSYVRET 92 (530)
T ss_dssp HHSSCHHHHHHHHHHHHTTCTTCH---------HHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCC-HHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCCCCH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHH
Confidence 567999999999999995444332 68999999999999999999999999999884 44443332110
Q ss_pred ------------------------------------Hhc---------CCCcchHHHHHHHHHHHhhCcccH--HHHHHH
Q psy9209 84 ------------------------------------QKR---------QPDESSSQAVLYFQRALKLNPNYL--GVWTLL 116 (349)
Q Consensus 84 ------------------------------------~~~---------~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l 116 (349)
... ...|++++|..+|+++++ .|... ..|...
T Consensus 93 ~~~~~~a~~~~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~~y~~al~-~P~~~~~~~~~~~ 171 (530)
T 2ooe_A 93 KGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCV-NPMINIEQLWRDY 171 (530)
T ss_dssp TTTSTTHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHHHHHHHTT-SCCTTHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHHHHHHHHh-chhhhHHHHHHHH
Confidence 000 014778889999999988 45432 122111
Q ss_pred HHH---------------------------------------------------------------HHh------cCCh-
Q psy9209 117 GHE---------------------------------------------------------------YME------MKNT- 126 (349)
Q Consensus 117 a~~---------------------------------------------------------------~~~------~~~~- 126 (349)
+.. ... .++.
T Consensus 172 ~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~ 251 (530)
T 2ooe_A 172 NKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQT 251 (530)
T ss_dssp HHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHHHHHHHHHHHHHCSSCCSCSH
T ss_pred HHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHcCCccCCcch
Confidence 000 000 0121
Q ss_pred ---HHHHHHHHHHHHhCcccHHHHHHHHHHHHH-------hCCHH-------HHHHHHHHHHh-cCCCChHHHHHHHHHH
Q psy9209 127 ---NAAIQCYRQAIEINNLDYRAWYGLGQTYEI-------LRLPY-------YGLYYYKQAHM-VRPNDPRMLTALGEAF 188 (349)
Q Consensus 127 ---~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-------~~~~~-------~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 188 (349)
..++..|++++...|.++.+|..+|..+.. .|+++ +|+..|+++++ ..|++..+|..+|.++
T Consensus 252 ~~~~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~ 331 (530)
T 2ooe_A 252 LITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYE 331 (530)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 366788999999999999999999999886 78887 89999999997 7999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHccccccH-HHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHH-HH
Q psy9209 189 EKQEKISEAMKCYNKSRAIGDADG-KALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANH-HL 266 (349)
Q Consensus 189 ~~~~~~~~A~~~~~~a~~~~~~~~-~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 266 (349)
...|++++|...|+++++..|.++ .+|..++.++.+.|++++|+..|++++...|. ....+...+.+ +.
T Consensus 332 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~---------~~~~~~~~a~~~~~ 402 (530)
T 2ooe_A 332 ESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART---------RHHVYVTAALMEYY 402 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC---------CTHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC---------chHHHHHHHHHHHH
Confidence 999999999999999999999875 68999999999999999999999999998775 45566655555 34
Q ss_pred HhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCC
Q psy9209 267 KANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPS 324 (349)
Q Consensus 267 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 324 (349)
..|++++|...|+++++..|+++.++..++.++...|+.++|...|++++...|.++.
T Consensus 403 ~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~ 460 (530)
T 2ooe_A 403 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE 460 (530)
T ss_dssp HTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGG
T ss_pred HcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHH
Confidence 6899999999999999999999999999999999999999999999999998877665
No 57
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.95 E-value=7.2e-25 Score=191.68 Aligned_cols=211 Identities=18% Similarity=0.155 Sum_probs=140.6
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----hCCHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYME----MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI----LRLPY 161 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~ 161 (349)
+++++|+.+|+++.+. .++.++..+|.+|.. .+++++|+.+|+++++. .++.+++.+|.+|.. .++++
T Consensus 201 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d~~ 276 (490)
T 2xm6_A 201 RNDAISAQWYRKSATS--GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKEPL 276 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCCHH
T ss_pred cCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCHH
Confidence 4444444444444432 233444455555543 44555555555555443 234555666666665 56666
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHh-----hCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC---cHHHHHH
Q psy9209 162 YGLYYYKQAHMVRPNDPRMLTALGEAFEKQ-----EKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN---ETEAAAD 233 (349)
Q Consensus 162 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~ 233 (349)
+|+.+|+++.+. .++.+++.+|.+|... +++++|+.+|+++++.. ++.+++.+|.++...| ++++|+.
T Consensus 277 ~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~y~~~g~~~~~~~A~~ 352 (490)
T 2xm6_A 277 KALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG--DATAQANLGAIYFRLGSEEEHKKAVE 352 (490)
T ss_dssp HHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhCCCcccHHHHHH
Confidence 666666666543 4556666667666665 66777777777766543 4566777777776655 6777777
Q ss_pred HHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH----hCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH----cCCC
Q psy9209 234 LFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK----ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK----RQPD 305 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~ 305 (349)
+|+++++. . .+.+++.+|.+|.. .+++++|+.+|+++.+. .++.++..+|.++.. .+++
T Consensus 353 ~~~~a~~~--~---------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~ 419 (490)
T 2xm6_A 353 WFRKAAAK--G---------EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDY 419 (490)
T ss_dssp HHHHHHHT--T---------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred HHHHHHHC--C---------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 77777765 2 57888889999888 78999999999998875 457888889999888 7888
Q ss_pred CCchhHHHHhhhcCCC
Q psy9209 306 ESSSQPMECAVVLDPV 321 (349)
Q Consensus 306 ~~A~~~~~~a~~~~p~ 321 (349)
++|..+|+++++.+|+
T Consensus 420 ~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 420 VQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCCCC
Confidence 9999999999988854
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.95 E-value=9e-27 Score=209.52 Aligned_cols=174 Identities=17% Similarity=0.133 Sum_probs=136.8
Q ss_pred hCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 184 (349)
..|++++++.++|.++..+|++++|+..|+++++++|++..++.++|.+|..+|++++|+..|+++++++|+++.++.++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 35777777888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHH
Q psy9209 185 GEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANH 264 (349)
Q Consensus 185 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (349)
|.++..+|++++|+..|+++++++|+++.++.++|.++..+|++++|+..|+++++++|+ ...++.++|.+
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~---------~~~a~~~L~~~ 154 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD---------FPDAYCNLAHC 154 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC---------CHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------ChHHHhhhhhH
Confidence 888888888888888888888888888888888888888888888888888888887777 67778888888
Q ss_pred HHHhCCHHHHHHHHHHHHcccCC
Q psy9209 265 HLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 265 ~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
+...|++++|.+.+++++++.|+
T Consensus 155 l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 155 LQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHhcccHHHHHHHHHHHHHhChh
Confidence 88888888888888777766543
No 59
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.95 E-value=1.8e-24 Score=189.13 Aligned_cols=256 Identities=15% Similarity=0.110 Sum_probs=156.0
Q ss_pred HHHHHHHHHHh----cCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHh-cCCCcchHHHHHHHHHHHhhCcccHHHHHH
Q psy9209 41 AFKYLANHHLK----ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK-RQPDESSSQAVLYFQRALKLNPNYLGVWTL 115 (349)
Q Consensus 41 ~~~~l~~~~~~----~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 115 (349)
+++.+|.+|.. .+++++|+.+|+++... +++.+...++.+... ....+++++|+.+|+++++. .++.++..
T Consensus 113 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~ 188 (490)
T 2xm6_A 113 AQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQ 188 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHH
Confidence 34445555444 44555555555554432 233333333322111 00134555555555555543 24555555
Q ss_pred HHHHHHh----cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q psy9209 116 LGHEYME----MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI----LRLPYYGLYYYKQAHMVRPNDPRMLTALGEA 187 (349)
Q Consensus 116 la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 187 (349)
+|.+|.. .+++++|+.+|+++++. .++.++..+|.+|.. .+++++|+.+|+++++. .++.+++.+|.+
T Consensus 189 Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~ 264 (490)
T 2xm6_A 189 LGYMYSRGLGVERNDAISAQWYRKSATS--GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ--GNSIAQFRLGYI 264 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT--TCHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHH
Confidence 5555555 55555566655555543 234555566666654 55666666666666553 445666667776
Q ss_pred HHH----hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc-----CcHHHHHHHHHHHHhcccccCCCCCCcchHHHH
Q psy9209 188 FEK----QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL-----NETEAAADLFMEFVSKLDTFAAPPDKTCGFFAF 258 (349)
Q Consensus 188 ~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-----~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (349)
+.. .+++++|+.+|+++.+. .++.+++.+|.++... +++++|+.+|+++.+.. .+.++
T Consensus 265 y~~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~-----------~~~a~ 331 (490)
T 2xm6_A 265 LEQGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG-----------DATAQ 331 (490)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT-----------CHHHH
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC-----------CHHHH
Confidence 666 66777777777776654 3466777777777766 67777777777776642 35677
Q ss_pred HHHHHHHHHhC---CHHHHHHHHHHHHcccCChHHHHHHHHHHHHH----cCCCCCchhHHHHhhhcC
Q psy9209 259 KYLANHHLKAN---NLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK----RQPDESSSQPMECAVVLD 319 (349)
Q Consensus 259 ~~l~~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~ 319 (349)
+.+|.+|...| ++++|+.+|+++.+. .++.++..+|.++.. .+++++|+.+|+++++..
T Consensus 332 ~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 332 ANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC
Confidence 78888887755 778888888888776 567788888888887 778888888888887753
No 60
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.95 E-value=5.4e-26 Score=178.49 Aligned_cols=207 Identities=14% Similarity=0.130 Sum_probs=179.0
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhCc-ccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLNP-NYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEIL 157 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 157 (349)
+...|..+...|++++|+..|+++++.+| .+..+++.+|.++...|++++|+..|+++++.+|.++.++..+|.++...
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 89 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDM 89 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHc
Confidence 44455566677999999999999999998 88899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCh-------HHHHHHHHHHHHhhCHHHHHHHHHHHHccccc--cHHHHHHHHHHHHhcCcH
Q psy9209 158 RLPYYGLYYYKQAHMVRPNDP-------RMLTALGEAFEKQEKISEAMKCYNKSRAIGDA--DGKALFKLAKLYDKLNET 228 (349)
Q Consensus 158 ~~~~~A~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~l~~~~~~~~~~ 228 (349)
|++++|+..++++++..|+++ .++..+|.++...|++++|+..|+++++.+|+ ++.++..+|.++...|+
T Consensus 90 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~- 168 (228)
T 4i17_A 90 KNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGA- 168 (228)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHH-
Confidence 999999999999999999998 66999999999999999999999999999999 89999999999977654
Q ss_pred HHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH
Q psy9209 229 EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK 301 (349)
Q Consensus 229 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 301 (349)
..++++..+.+. .... ..+......+.+++|+.+++++++++|+++.+...++.+...
T Consensus 169 ----~~~~~a~~~~~~---------~~~~--~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~~ 226 (228)
T 4i17_A 169 ----DVLRKATPLASS---------NKEK--YASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAM 226 (228)
T ss_dssp ----HHHHHHGGGTTT---------CHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred ----HHHHHHHhcccC---------CHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence 445666666554 2222 244455667889999999999999999999999988887643
No 61
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.95 E-value=5.8e-26 Score=192.46 Aligned_cols=237 Identities=15% Similarity=0.097 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhh---hhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcc-------c
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQH---EETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPN-------Y 109 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~---~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-------~ 109 (349)
..++.+|..+...|++++|+..+++++.. .++.......+..+|.++...|++++|+.++++++++.+. .
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 183 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHH
Confidence 45677999999999999999999999987 2334434445667777788889999999999999988443 3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHh-----cC-CCC
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YRAWYGLGQTYEILRLPYYGLYYYKQAHM-----VR-PND 177 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-----~~-~~~ 177 (349)
..++..+|.++...|++++|+.+|++++++.+.. ..++.++|.+|...|++++|+.+++++++ .+ |..
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 263 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSL 263 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhH
Confidence 5688999999999999999999999999885543 36899999999999999999999999999 45 777
Q ss_pred hHHHHHHHHHHHHhhCHHHHHHHHHHHHccc-----cccHHHHHHHHHHHHhcCc---HHHHHHHHHHHHhcccccCCCC
Q psy9209 178 PRMLTALGEAFEKQEKISEAMKCYNKSRAIG-----DADGKALFKLAKLYDKLNE---TEAAADLFMEFVSKLDTFAAPP 249 (349)
Q Consensus 178 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~ 249 (349)
+.++..+|.++...|++++|+.++++++... |.....+..+|.++...|+ +++|+..+++. ...|.
T Consensus 264 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~-~~~~~----- 337 (383)
T 3ulq_A 264 PQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK-MLYAD----- 337 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT-TCHHH-----
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-cCHHH-----
Confidence 8899999999999999999999999999884 3334446779999999999 77777777766 33333
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccC
Q psy9209 250 DKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE 286 (349)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 286 (349)
...++..+|.+|...|++++|..++++++++..
T Consensus 338 ----~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~ 370 (383)
T 3ulq_A 338 ----LEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQ 370 (383)
T ss_dssp ----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999988653
No 62
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.95 E-value=2e-26 Score=207.32 Aligned_cols=175 Identities=15% Similarity=0.078 Sum_probs=169.5
Q ss_pred hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHH
Q psy9209 139 INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKL 218 (349)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 218 (349)
..|+++.++.++|.++..+|++++|+.+|+++++++|+++.++.++|.+|..+|++++|+..|+++++++|+++.++.++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHH
Q psy9209 219 AKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 298 (349)
Q Consensus 219 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 298 (349)
|.++..+|++++|+..|+++++++|+ ...++.++|.++..+|++++|+..|+++++++|++..++..++.+
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~---------~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~ 154 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPA---------FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHC 154 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhH
Confidence 99999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 299 AQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 299 ~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
+..+|++++|.+.+++++++.|+.
T Consensus 155 l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 155 LQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHhcccHHHHHHHHHHHHHhChhH
Confidence 999999999999999999887653
No 63
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.95 E-value=3.4e-25 Score=187.32 Aligned_cols=304 Identities=14% Similarity=0.090 Sum_probs=231.6
Q ss_pred HhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHH--HHHhcCCHHHHH---------HHHHHHhhh-hh-chH
Q psy9209 7 DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLAN--HHLKANNLDTAY---------KCAQKCLQH-EE-TAE 73 (349)
Q Consensus 7 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~A~---------~~~~~~l~~-~~-~~~ 73 (349)
...+++++|..+++++....+....+.+ . ..++.+.. .....+.+..+. ..++++-.. .+ +..
T Consensus 23 i~~~~~~~A~~l~~~i~~~~~~~~~~~~--~--~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~ 98 (378)
T 3q15_A 23 IRQFSVPDAEILKAEVEQDIQQMEEDQD--L--LIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLETIETPQKKLTGL 98 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHGGGBCCCHH--H--HHHHHHHHHHHHHHHHTCCC--------CHHHHHHHHHGGGHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhcccHH--H--HHHHHHHHHHHHHHHhhcCcccccccccchHHHHHHHhccCCCCccH
Confidence 6789999999999988765544332221 1 12222222 122223333333 444443222 11 222
Q ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCc------ccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcc-----
Q psy9209 74 EAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNP------NYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNL----- 142 (349)
Q Consensus 74 ~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~----- 142 (349)
.....+...|..+...|++++|+..|++++.+.+ ..+.++..+|.++...|++++|+.++++++++.+.
T Consensus 99 l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 178 (378)
T 3q15_A 99 LKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYS 178 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCch
Confidence 2233344556667778999999999999998742 34678899999999999999999999999987442
Q ss_pred --cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC------ChHHHHHHHHHHHHhhCHHHHHHHHHHHHc-----ccc
Q psy9209 143 --DYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN------DPRMLTALGEAFEKQEKISEAMKCYNKSRA-----IGD 209 (349)
Q Consensus 143 --~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-----~~~ 209 (349)
...++..+|.++...|++++|+.++++++++.+. ...++.++|.++...|++++|+.++++++. .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 3567889999999999999999999999987432 236788999999999999999999999999 788
Q ss_pred ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC---HHHHHHHHHHHHcccC
Q psy9209 210 ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN---LDTAYKCAQKCLQHEE 286 (349)
Q Consensus 210 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~a~~~~~ 286 (349)
..+.++..+|.++...|++++|+.++++++...+.. . .+.....+..++.++...|+ +.+|+.++++ ....|
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~-~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~-~~~~~ 333 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR---S-HKFYKELFLFLQAVYKETVDERKIHDLLSYFEK-KNLHA 333 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT---C-CSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH-TTCHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---C-CHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh-CCChh
Confidence 888999999999999999999999999999987652 1 22345567888999999999 8889888887 34455
Q ss_pred ChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcC
Q psy9209 287 TAEEAKSLLRSIAQKRQPDESSSQPMECAVVLD 319 (349)
Q Consensus 287 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 319 (349)
........+|.++...|++++|..+|+++++..
T Consensus 334 ~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~ 366 (378)
T 3q15_A 334 YIEACARSAAAVFESSCHFEQAAAFYRKVLKAQ 366 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 667788899999999999999999999998764
No 64
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.94 E-value=2.5e-25 Score=196.50 Aligned_cols=222 Identities=11% Similarity=0.025 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHh-------cCChH-------HHHHHHHHHHH-hCcccHHHHHHHHHHHHHh
Q psy9209 93 SQAVLYFQRALKLNPNYLGVWTLLGHEYME-------MKNTN-------AAIQCYRQAIE-INNLDYRAWYGLGQTYEIL 157 (349)
Q Consensus 93 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-------~~~~~-------~A~~~~~~a~~-~~~~~~~~~~~l~~~~~~~ 157 (349)
.+++..|++++...|.++.+|..+|..+.. .|+++ +|+..|+++++ ..|++..+|..+|.++...
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 367789999999999999999999999986 79987 99999999997 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHH-HHhcCcHHHHHHHH
Q psy9209 158 RLPYYGLYYYKQAHMVRPNDP-RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKL-YDKLNETEAAADLF 235 (349)
Q Consensus 158 ~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~ 235 (349)
|++++|...|+++++..|.++ .+|..+|.++...|++++|...|+++++..|.....+...+.+ +...|++++|...|
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~ 414 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIF 414 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHH
Confidence 999999999999999999986 6999999999999999999999999999998887777776665 34689999999999
Q ss_pred HHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh----HHHHHHHHHHHHHcCCCCCchhH
Q psy9209 236 MEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA----EEAKSLLRSIAQKRQPDESSSQP 311 (349)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~ 311 (349)
+++++..|+ .+.+|..++.++...|+.++|...|++++...|.+ ..+|..........|+.+.+..+
T Consensus 415 e~al~~~p~---------~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~ 485 (530)
T 2ooe_A 415 ELGLKKYGD---------IPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKV 485 (530)
T ss_dssp HHHHHHHTT---------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHCCC---------CHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999998 79999999999999999999999999999986544 34787888888889999999999
Q ss_pred HHHhhhcCCCCC
Q psy9209 312 MECAVVLDPVPP 323 (349)
Q Consensus 312 ~~~a~~~~p~~~ 323 (349)
++++++..|++.
T Consensus 486 ~~r~~~~~p~~~ 497 (530)
T 2ooe_A 486 EKRRFTAFREEY 497 (530)
T ss_dssp HHHHHHHTHHHH
T ss_pred HHHHHHHCchhc
Confidence 999999999643
No 65
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=185.05 Aligned_cols=246 Identities=13% Similarity=0.105 Sum_probs=176.3
Q ss_pred CCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh-----chHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhh--
Q psy9209 33 PDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE-----TAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKL-- 105 (349)
Q Consensus 33 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~-- 105 (349)
++......++..+|.++...|++++|+.+++++++... +.+.....+..++.++...|++++|+.++++++..
T Consensus 21 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 21 YEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE 100 (311)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 33444457899999999999999999999999998521 22333334555556666679999999999999877
Q ss_pred ------CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC--------cccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy9209 106 ------NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEIN--------NLDYRAWYGLGQTYEILRLPYYGLYYYKQAH 171 (349)
Q Consensus 106 ------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 171 (349)
.|....++..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.++++++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35667788899999999999999999999998873 6667788889999999999999999999988
Q ss_pred hc--------CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccc---------c------HHHHHHHHHHHHhcCcH
Q psy9209 172 MV--------RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDA---------D------GKALFKLAKLYDKLNET 228 (349)
Q Consensus 172 ~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---------~------~~~~~~l~~~~~~~~~~ 228 (349)
.. .|....++..+|.++...|++++|+.+++++++..|. . ...+..++..+...+.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (311)
T 3nf1_A 181 EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSF 260 (311)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCS
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHH
Confidence 87 5556678888899999999999999999988876432 1 22233334444455556
Q ss_pred HHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 229 EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 229 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
.+|...++++....|. ...++..+|.++...|++++|+.++++++++.|.
T Consensus 261 ~~a~~~~~~~~~~~~~---------~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 261 GEYGGWYKACKVDSPT---------VTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CCCC---------CHH---------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhhcCCCCch---------HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 6666667776666665 6777778888888888888888888887776653
No 66
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.94 E-value=7.3e-25 Score=172.04 Aligned_cols=208 Identities=17% Similarity=0.107 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh-chHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEE-TAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGH 118 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 118 (349)
..++.+|.+++..|++++|+..|++++..+| .+...+.. ++.++...|++++|+..|+++++.+|+++.++..+|.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYN---CGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHH---HHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHH---HHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 6899999999999999999999999999998 77766544 4556666799999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHhCcccH-------HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHH
Q psy9209 119 EYMEMKNTNAAIQCYRQAIEINNLDY-------RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN--DPRMLTALGEAFE 189 (349)
Q Consensus 119 ~~~~~~~~~~A~~~~~~a~~~~~~~~-------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~ 189 (349)
++...|++++|+..|+++++.+|+++ .++..+|.++...|++++|+..|+++++.+|+ ++.++..+|.++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~ 164 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFY 164 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHH
Confidence 99999999999999999999999988 67999999999999999999999999999999 9999999999998
Q ss_pred HhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHH
Q psy9209 190 KQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHL 266 (349)
Q Consensus 190 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 266 (349)
..|+ ..++++..+.+.....+ .+......+.+++|+.++++++++.|+ ...+...++.+..
T Consensus 165 ~~~~-----~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~A~~~~~~a~~l~p~---------~~~~~~~l~~i~~ 225 (228)
T 4i17_A 165 NNGA-----DVLRKATPLASSNKEKY--ASEKAKADAAFKKAVDYLGEAVTLSPN---------RTEIKQMQDQVKA 225 (228)
T ss_dssp HHHH-----HHHHHHGGGTTTCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHT
T ss_pred HHHH-----HHHHHHHhcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhcCCC---------CHHHHHHHHHHHH
Confidence 7764 45666777766554443 344456678899999999999999998 7888877776643
No 67
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.6e-26 Score=187.96 Aligned_cols=250 Identities=15% Similarity=0.095 Sum_probs=198.1
Q ss_pred hHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh----
Q psy9209 72 AEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKL--------NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI---- 139 (349)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---- 139 (349)
++.....+..++..+...|++++|+.++++++++ .|....++..+|.++...|++++|+.++++++..
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 102 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKT 102 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3333444556666677789999999999999985 6777889999999999999999999999999987
Q ss_pred ----CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC--------CCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 140 ----NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR--------PNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 140 ----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
.|....++..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.++++++..
T Consensus 103 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 103 LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46678899999999999999999999999999874 455678999999999999999999999999998
Q ss_pred --------ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCC------CCCCcchHHHHHHHHHHHHHhCCHHH
Q psy9209 208 --------GDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAA------PPDKTCGFFAFKYLANHHLKANNLDT 273 (349)
Q Consensus 208 --------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~g~~~~ 273 (349)
.|....++..+|.++...|++++|+..+++++...+.... ..........+..++..+...+.+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (311)
T 3nf1_A 183 YQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGE 262 (311)
T ss_dssp HHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCC
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHH
Confidence 7777889999999999999999999999999987543110 01111134445555666667778888
Q ss_pred HHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCC
Q psy9209 274 AYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPV 321 (349)
Q Consensus 274 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 321 (349)
|...++++....|....++..+|.++...|++++|+.+|++++++.|+
T Consensus 263 a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 263 YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 888999999999999999999999999999999999999999999875
No 68
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.93 E-value=7e-25 Score=175.79 Aligned_cols=200 Identities=14% Similarity=0.078 Sum_probs=152.4
Q ss_pred hhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC---
Q psy9209 104 KLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD---YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND--- 177 (349)
Q Consensus 104 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~--- 177 (349)
...|.++..++.+|..+...|++++|+..|+++++..|.+ +.+++.+|.++...|++++|+..|+++++..|++
T Consensus 9 ~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 88 (261)
T 3qky_A 9 RLRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRV 88 (261)
T ss_dssp --CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchh
Confidence 3456666777777777777777777777777777776666 6677777777777777777777777777776644
Q ss_pred hHHHHHHHHHHHH--------hhCHHHHHHHHHHHHccccccHHHH-----------------HHHHHHHHhcCcHHHHH
Q psy9209 178 PRMLTALGEAFEK--------QEKISEAMKCYNKSRAIGDADGKAL-----------------FKLAKLYDKLNETEAAA 232 (349)
Q Consensus 178 ~~~~~~l~~~~~~--------~~~~~~A~~~~~~a~~~~~~~~~~~-----------------~~l~~~~~~~~~~~~A~ 232 (349)
+.+++.+|.++.. .|++++|+..|++++...|+++.+. +.+|.++...|++++|+
T Consensus 89 ~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 168 (261)
T 3qky_A 89 PQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAA 168 (261)
T ss_dssp HHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 3566677777777 7777777777777777766654444 88999999999999999
Q ss_pred HHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHh----------CCHHHHHHHHHHHHcccCChH---HHHHHHHHHH
Q psy9209 233 DLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA----------NNLDTAYKCAQKCLQHEETAE---EAKSLLRSIA 299 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~~~~A~~~~~~a~~~~~~~~---~~~~~l~~~~ 299 (349)
..|++++...|+ .+....+++.+|.++... |++++|+..|+++++..|+++ .+...++.+.
T Consensus 169 ~~~~~~l~~~p~------~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~ 242 (261)
T 3qky_A 169 VTYEAVFDAYPD------TPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRAR 242 (261)
T ss_dssp HHHHHHHHHCTT------STTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC------CchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHH
Confidence 999999999887 344678999999999977 999999999999999999874 5666777787
Q ss_pred HHcCCCCCch
Q psy9209 300 QKRQPDESSS 309 (349)
Q Consensus 300 ~~~~~~~~A~ 309 (349)
...++++++.
T Consensus 243 ~~~~~~~~~~ 252 (261)
T 3qky_A 243 QRLTELEGDA 252 (261)
T ss_dssp HHHHHHHTCT
T ss_pred HHHHHhhhhh
Confidence 7777665544
No 69
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.93 E-value=3.4e-24 Score=181.20 Aligned_cols=237 Identities=11% Similarity=0.089 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh---hchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcc-------
Q psy9209 39 FFAFKYLANHHLKANNLDTAYKCAQKCLQHE---ETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPN------- 108 (349)
Q Consensus 39 ~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~---~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------- 108 (349)
+..++.+|..+...|++++|+..|++++... ++.+.....+..+|.++...|++++|+.++++++++.+.
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 180 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIR 180 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhh
Confidence 3568889999999999999999999999764 334444555677778888889999999999999987543
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHh-----cCCCC
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINN------LDYRAWYGLGQTYEILRLPYYGLYYYKQAHM-----VRPND 177 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-----~~~~~ 177 (349)
...++..+|.++...|++++|+.+|++++++.+ ....++.++|.+|...|++++|+.++++++. .+|..
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 260 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL 260 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH
Confidence 355788999999999999999999999999743 2356889999999999999999999999999 77878
Q ss_pred hHHHHHHHHHHHHhhCHHHHHHHHHHHHccc-----cccHHHHHHHHHHHHhcCc---HHHHHHHHHHHHhcccccCCCC
Q psy9209 178 PRMLTALGEAFEKQEKISEAMKCYNKSRAIG-----DADGKALFKLAKLYDKLNE---TEAAADLFMEFVSKLDTFAAPP 249 (349)
Q Consensus 178 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~ 249 (349)
+.++..+|.++...|++++|+.+++++++.. |.....+..++.++...++ +.+|+..+++. ...+.
T Consensus 261 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~-~~~~~----- 334 (378)
T 3q15_A 261 PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKK-NLHAY----- 334 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHT-TCHHH-----
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhC-CChhH-----
Confidence 8999999999999999999999999999873 3345566778888888888 77888777762 22233
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHccc
Q psy9209 250 DKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE 285 (349)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 285 (349)
....+..+|.+|...|++++|..+|+++++..
T Consensus 335 ----~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~ 366 (378)
T 3q15_A 335 ----IEACARSAAAVFESSCHFEQAAAFYRKVLKAQ 366 (378)
T ss_dssp ----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999998764
No 70
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.93 E-value=2.7e-24 Score=175.05 Aligned_cols=225 Identities=14% Similarity=0.030 Sum_probs=182.8
Q ss_pred CHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcc------cHHHHHHHHHHHHhcCChH
Q psy9209 54 NLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPN------YLGVWTLLGHEYMEMKNTN 127 (349)
Q Consensus 54 ~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~ 127 (349)
++++|+..|+++.. .+...|++++|+..|++++.+.+. .+.++.++|.+|..+|+++
T Consensus 32 ~~~~A~~~~~~a~~-----------------~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~ 94 (292)
T 1qqe_A 32 KFEEAADLCVQAAT-----------------IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSV 94 (292)
T ss_dssp HHHHHHHHHHHHHH-----------------HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHHHHHHH-----------------HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHH
Confidence 58999999988732 233359999999999999988532 2578899999999999999
Q ss_pred HHHHHHHHHHHhCccc------HHHHHHHHHHHHHh-CCHHHHHHHHHHHHhcCCCC------hHHHHHHHHHHHHhhCH
Q psy9209 128 AAIQCYRQAIEINNLD------YRAWYGLGQTYEIL-RLPYYGLYYYKQAHMVRPND------PRMLTALGEAFEKQEKI 194 (349)
Q Consensus 128 ~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~-~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~ 194 (349)
+|+.+|++++++.|.. ..++.++|.+|... |++++|+.+|++++++.|.. ..++..+|.++..+|++
T Consensus 95 ~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~ 174 (292)
T 1qqe_A 95 NAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQY 174 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCH
Confidence 9999999999987653 56889999999996 99999999999999997754 46788999999999999
Q ss_pred HHHHHHHHHHHccccccHH-------HHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHH-
Q psy9209 195 SEAMKCYNKSRAIGDADGK-------ALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHL- 266 (349)
Q Consensus 195 ~~A~~~~~~a~~~~~~~~~-------~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 266 (349)
++|+.+|++++...|.+.. ++..+|.++..+|++++|+..|++++.+.|... . ......+..++..+.
T Consensus 175 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~-~~~~~~l~~l~~~~~~ 250 (292)
T 1qqe_A 175 IEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA---D-SRESNFLKSLIDAVNE 250 (292)
T ss_dssp HHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC---C-cHHHHHHHHHHHHHHc
Confidence 9999999999999876543 678999999999999999999999999998721 1 112334556676665
Q ss_pred -HhCCHHHHHHHHHHHHcccCChHHHHHHHHHHH
Q psy9209 267 -KANNLDTAYKCAQKCLQHEETAEEAKSLLRSIA 299 (349)
Q Consensus 267 -~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 299 (349)
..+++++|+..|++++.++|....++..+....
T Consensus 251 ~~~~~~~~A~~~~~~~~~l~~~~~~~~~~~k~~~ 284 (292)
T 1qqe_A 251 GDSEQLSEHCKEFDNFMRLDKWKITILNKIKESI 284 (292)
T ss_dssp TCTTTHHHHHHHHTTSSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCccHHHHHHHHHHHHHHh
Confidence 457899999999999999998877766665544
No 71
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.93 E-value=3.7e-24 Score=184.60 Aligned_cols=281 Identities=12% Similarity=0.030 Sum_probs=187.8
Q ss_pred hhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCH---HHHHHHHHHHhhhhhchHHHHHHH
Q psy9209 3 NKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNL---DTAYKCAQKCLQHEETAEEAKSLL 79 (349)
Q Consensus 3 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~A~~~~~~~l~~~~~~~~~~~~l 79 (349)
|..+.+.|++++|+..|+++.+. .++ .+++.+|.++...|+. ++|+.+|+++++. ++.+...+
T Consensus 10 a~~~~~~g~~~~A~~~~~~aa~~-----g~~------~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~---~~~A~~~L 75 (452)
T 3e4b_A 10 ANEALKRGDTVTAQQNYQQLAEL-----GYS------EAQVGLADIQVGTRDPAQIKQAEATYRAAADT---SPRAQARL 75 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----TCC------TGGGTCC-------------------------------CHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHC-----CCH------HHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC---CHHHHHHH
Confidence 67788999999999999998843 122 3577899999888888 8999999999866 45555555
Q ss_pred HHHHHhcCC--CcchHHHHHHHHHHHhhCcc---------------------------------cHHHHHHHHHHHHhcC
Q psy9209 80 RSIAQKRQP--DESSSQAVLYFQRALKLNPN---------------------------------YLGVWTLLGHEYMEMK 124 (349)
Q Consensus 80 ~~~~~~~~~--~~~~~~A~~~~~~~~~~~~~---------------------------------~~~~~~~la~~~~~~~ 124 (349)
+.+...... .+++++|+.+|+++++..+. ++.+++.+|.+|...+
T Consensus 76 g~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~y~~~~ 155 (452)
T 3e4b_A 76 GRLLAAKPGATEAEHHEAESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQG 155 (452)
T ss_dssp HHHHHTC--CCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHcCC
Confidence 553222110 14889999999999875432 1223344444444444
Q ss_pred ChHHH----HHHHHHHHHhCcccHHHHHHHHHHHHHhC---CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh----hC
Q psy9209 125 NTNAA----IQCYRQAIEINNLDYRAWYGLGQTYEILR---LPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQ----EK 193 (349)
Q Consensus 125 ~~~~A----~~~~~~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~ 193 (349)
.++++ ..+++.+... ++.+++.+|.+|...| ++++|+.+|+++.+..|.....++.+|.+|... ++
T Consensus 156 ~~~~~~~~a~~~~~~a~~~---~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d 232 (452)
T 3e4b_A 156 TYDQHLDDVERICKAALNT---TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPD 232 (452)
T ss_dssp CGGGGHHHHHHHHHHHTTT---CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCC
T ss_pred CcccCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCC
Confidence 33222 2233333332 3448888898888888 889999999999998888888888899888665 68
Q ss_pred HHHHHHHHHHHHccccccHHHHHHHHHH-H--HhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhC-
Q psy9209 194 ISEAMKCYNKSRAIGDADGKALFKLAKL-Y--DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKAN- 269 (349)
Q Consensus 194 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~-~--~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g- 269 (349)
+++|+.+|+++. |.++.+++.+|.+ + ...+++++|+.+|+++.+.. .+.+++.||.+|. .|
T Consensus 233 ~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g-----------~~~A~~~Lg~~y~-~G~ 297 (452)
T 3e4b_A 233 EKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD-----------QPRAELLLGKLYY-EGK 297 (452)
T ss_dssp HHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHH-HCS
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHH-cCC
Confidence 899999999987 8888999999988 4 56788999999999888543 5788888998887 55
Q ss_pred ----CHHHHHHHHHHHHcccCChHHHHHHHHHHHHH----cCCCCCchhHHHHhhhc
Q psy9209 270 ----NLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK----RQPDESSSQPMECAVVL 318 (349)
Q Consensus 270 ----~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~ 318 (349)
++++|+.+|+++. +.++.+...+|.++.. ..++++|+.+|+++.+.
T Consensus 298 g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 298 WVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp SSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 8999999999888 7888888999988876 33778888999888764
No 72
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.93 E-value=4.2e-24 Score=164.92 Aligned_cols=179 Identities=19% Similarity=0.156 Sum_probs=146.2
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHH----------------HHHHHHHhCCHHHHHHHHHHHHh
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYG----------------LGQTYEILRLPYYGLYYYKQAHM 172 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~----------------l~~~~~~~~~~~~A~~~~~~~~~ 172 (349)
.++.+...|..+...|++++|+..|+++++.+|+++.+++. +|.++...|++++|+..|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34567778888888888888888888888888888888888 99999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCc--HHHHHHHHHHHHhcccccCCCCC
Q psy9209 173 VRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNE--TEAAADLFMEFVSKLDTFAAPPD 250 (349)
Q Consensus 173 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~--~~~A~~~~~~~~~~~~~~~~~~~ 250 (349)
++|+++.++..+|.++...|++++|+.+|+++++++|+++.+++.+|.++...|+ ...+...+++++...|
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~------- 155 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTK------- 155 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCH-------
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCc-------
Confidence 9999999999999999999999999999999999999999999999999877654 4456667777654433
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHH
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 298 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 298 (349)
...+++.+|.++...|++++|+.+|++++++.|+.. +...+..+
T Consensus 156 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i 199 (208)
T 3urz_A 156 ---MQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKI 199 (208)
T ss_dssp ---HHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHH
T ss_pred ---hhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHH
Confidence 345778889999999999999999999999999754 33444444
No 73
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.93 E-value=2e-23 Score=168.21 Aligned_cols=247 Identities=8% Similarity=0.005 Sum_probs=204.7
Q ss_pred HHHHHHHHhcCCH-HHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 43 KYLANHHLKANNL-DTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDE--SSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 43 ~~l~~~~~~~~~~-~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~--~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
+.........|.+ ++|+..+.+++.++|++..+|...+.+... .| ++++++..+.+++..+|++..+|...+.+
T Consensus 36 ~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~---l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~i 112 (306)
T 3dra_A 36 MGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKN---LPNRNLYDELDWCEEIALDNEKNYQIWNYRQLI 112 (306)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT---CTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH---cccccHHHHHHHHHHHHHHCcccHHHHHHHHHH
Confidence 3344444555555 689999999999999999988877766544 35 89999999999999999999999999888
Q ss_pred H----Hhc---CChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHH--HHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q psy9209 120 Y----MEM---KNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPY--YGLYYYKQAHMVRPNDPRMLTALGEAFEK 190 (349)
Q Consensus 120 ~----~~~---~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~--~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 190 (349)
+ ... +++++++.++.++++.+|++..+|...+.+....|.++ +++.+++++++.+|.+..+|...+.++..
T Consensus 113 L~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 113 IGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 8 666 78899999999999999999999999999999999888 99999999999999999999999999888
Q ss_pred hhC------HHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHH-HHHHHHHHHhcccccCCCCCCcchHHHHHHHHH
Q psy9209 191 QEK------ISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEA-AADLFMEFVSKLDTFAAPPDKTCGFFAFKYLAN 263 (349)
Q Consensus 191 ~~~------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~-A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (349)
.++ ++++++++.+++..+|.+..+|+.++.++...|+..+ ...++.+++...+. .+..+.++..++.
T Consensus 193 l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~------~~~s~~al~~la~ 266 (306)
T 3dra_A 193 KKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKD------QVTSSFALETLAK 266 (306)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGT------EESCHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCC------CCCCHHHHHHHHH
Confidence 887 8999999999999999999999999999999998655 44566666665410 1226888999999
Q ss_pred HHHHhCCHHHHHHHHHHHHc-ccCChHHHHHHHHHH
Q psy9209 264 HHLKANNLDTAYKCAQKCLQ-HEETAEEAKSLLRSI 298 (349)
Q Consensus 264 ~~~~~g~~~~A~~~~~~a~~-~~~~~~~~~~~l~~~ 298 (349)
++.+.|+.++|+++|+.+.+ .+|-....|...+..
T Consensus 267 ~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~~~~~ 302 (306)
T 3dra_A 267 IYTQQKKYNESRTVYDLLKSKYNPIRSNFWDYQISK 302 (306)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHHHHHT
T ss_pred HHHccCCHHHHHHHHHHHHhccChHHHHHHHHHHhh
Confidence 99999999999999999886 799888888776543
No 74
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.93 E-value=9.8e-23 Score=164.18 Aligned_cols=228 Identities=12% Similarity=0.071 Sum_probs=212.8
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHhCcccHHHHHHHHHHH----HHh---CCH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMK--NTNAAIQCYRQAIEINNLDYRAWYGLGQTY----EIL---RLP 160 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~----~~~---~~~ 160 (349)
...++|+..+.+++.++|++..+|+..+.++...| ++++++..+.+++..+|++..+|...+.++ ... +++
T Consensus 47 e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~ 126 (306)
T 3dra_A 47 EYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDP 126 (306)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCT
T ss_pred CCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCH
Confidence 45578999999999999999999999999999999 999999999999999999999999999999 666 789
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHH--HHHHHHHHHHccccccHHHHHHHHHHHHhcCc------HHHHH
Q psy9209 161 YYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKIS--EAMKCYNKSRAIGDADGKALFKLAKLYDKLNE------TEAAA 232 (349)
Q Consensus 161 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~------~~~A~ 232 (349)
++++.++.++++.+|.+..+|...+.++...|.++ +++.+++++++.+|.+..+|...+.+....+. +++++
T Consensus 127 ~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl 206 (306)
T 3dra_A 127 YREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEEL 206 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999999999999999988 99999
Q ss_pred HHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHH-HHHHHHHHHccc---CChHHHHHHHHHHHHHcCCCCCc
Q psy9209 233 DLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDT-AYKCAQKCLQHE---ETAEEAKSLLRSIAQKRQPDESS 308 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~a~~~~---~~~~~~~~~l~~~~~~~~~~~~A 308 (349)
+++.+++..+|. +..+|+.++.++...|+..+ ...++.+++... |.++.++..++.++...|+.++|
T Consensus 207 ~~~~~aI~~~p~---------n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A 277 (306)
T 3dra_A 207 NYVKDKIVKCPQ---------NPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNES 277 (306)
T ss_dssp HHHHHHHHHCSS---------CHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCC---------CccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHH
Confidence 999999999999 89999999999999998555 556888888776 88999999999999999999999
Q ss_pred hhHHHHhhh-cCCCCCCcc
Q psy9209 309 SQPMECAVV-LDPVPPSTR 326 (349)
Q Consensus 309 ~~~~~~a~~-~~p~~~~~~ 326 (349)
+++|+.+.+ .||.....+
T Consensus 278 ~~~~~~l~~~~Dpir~~yW 296 (306)
T 3dra_A 278 RTVYDLLKSKYNPIRSNFW 296 (306)
T ss_dssp HHHHHHHHHTTCGGGHHHH
T ss_pred HHHHHHHHhccChHHHHHH
Confidence 999999996 799765544
No 75
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.93 E-value=1e-22 Score=171.91 Aligned_cols=278 Identities=12% Similarity=-0.066 Sum_probs=222.3
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHH---HHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEE---AKSL 78 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~---~~~~ 78 (349)
+|.++...|++++|+..+++++...+. .+......++..+|.++...|++++|+..+++++...|.... ....
T Consensus 20 ~a~~~~~~g~~~~A~~~~~~al~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 95 (373)
T 1hz4_A 20 RAQVAINDGNPDEAERLAKLALEELPP----GWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWS 95 (373)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCT----TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHcCCC----CchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 577888999999999999999964421 112223357889999999999999999999999987665432 2233
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHhhC--------cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcc-----cHH
Q psy9209 79 LRSIAQKRQPDESSSQAVLYFQRALKLN--------PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNL-----DYR 145 (349)
Q Consensus 79 l~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-----~~~ 145 (349)
+..++..+...|++++|+..+++++... |....++..+|.++...|++++|...+++++...+. ...
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 175 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQ 175 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHH
Confidence 5566777777899999999999999875 334567788999999999999999999999998654 356
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--ChHHHH-----HHHHHHHHhhCHHHHHHHHHHHHcccccc----HHH
Q psy9209 146 AWYGLGQTYEILRLPYYGLYYYKQAHMVRPN--DPRMLT-----ALGEAFEKQEKISEAMKCYNKSRAIGDAD----GKA 214 (349)
Q Consensus 146 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~-----~l~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~ 214 (349)
++..+|.++...|++++|..++++++.+.+. .+..+. ..+.++...|++++|..++++++...|.. ...
T Consensus 176 ~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 255 (373)
T 1hz4_A 176 CLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQ 255 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHH
Confidence 7889999999999999999999999876332 222222 34566889999999999999999876542 335
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccC
Q psy9209 215 LFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE 286 (349)
Q Consensus 215 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 286 (349)
+..++.++...|++++|...+++++...+. .........++..+|.++...|++++|...+++++...+
T Consensus 256 ~~~la~~~~~~g~~~~A~~~l~~a~~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~~~ 324 (373)
T 1hz4_A 256 WRNIARAQILLGEFEPAEIVLEELNENARS---LRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLAN 324 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---CcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 778999999999999999999999987665 112222456888999999999999999999999988754
No 76
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.92 E-value=8.1e-25 Score=159.58 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=126.6
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCH
Q psy9209 81 SIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLP 160 (349)
Q Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 160 (349)
.+|.++...|++++|+..+++++..+|+.+..++.+|.+|...|++++|+..|+++++++|+++.+|..+|.++...|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 45677788889999999999999888888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHH-HHHHHccccccHHHHHHHHHHHHhcCc
Q psy9209 161 YYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKC-YNKSRAIGDADGKALFKLAKLYDKLNE 227 (349)
Q Consensus 161 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~-~~~a~~~~~~~~~~~~~l~~~~~~~~~ 227 (349)
++|+..|+++++++|+++.++..+|.++...|++++|... ++++++++|+++.++..++.++...|+
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999998877665 588999999999998888888888775
No 77
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.7e-24 Score=195.75 Aligned_cols=199 Identities=10% Similarity=-0.078 Sum_probs=161.4
Q ss_pred hCcccHHHHHHHHHHHHhcCChHHHHHHHHHHH--------HhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAI--------EINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN 176 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~--------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (349)
.+|+++.+++..| ...|++++|+..+++++ +.+|++..++..+|.++...|++++|+..|+++++.+|+
T Consensus 389 ~~p~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 465 (681)
T 2pzi_A 389 VDPTDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW 465 (681)
T ss_dssp CCTTSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCcchHHhhc---ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc
Confidence 4666776766666 67888888888888888 778888888888888888888888888888888888888
Q ss_pred ChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHH
Q psy9209 177 DPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFF 256 (349)
Q Consensus 177 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (349)
++.+++.+|.++...|++++|+..|+++++++|+++.++.++|.++..+|++++ +..|+++++.+|. ...
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~---------~~~ 535 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG---------VIS 535 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT---------CHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc---------hHH
Confidence 888888888888888888888888888888888888888888888888888888 8888888888888 788
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCc-hhHHHHhh
Q psy9209 257 AFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESS-SQPMECAV 316 (349)
Q Consensus 257 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A-~~~~~~a~ 316 (349)
+++++|.++...|++++|+..|+++++++|++..++..++.++...++.+++ ...+++++
T Consensus 536 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~ 596 (681)
T 2pzi_A 536 AAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAA 596 (681)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-------CCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCCCCCCHHHHHHHH
Confidence 8888888888888888888888888888888888888888888776664444 44444443
No 78
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.92 E-value=3.9e-24 Score=174.09 Aligned_cols=217 Identities=14% Similarity=0.073 Sum_probs=177.7
Q ss_pred chHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcc------cHHHHHHHHHHHHHhCCHHHHH
Q psy9209 91 SSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNL------DYRAWYGLGQTYEILRLPYYGL 164 (349)
Q Consensus 91 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~ 164 (349)
++++|+..|+++ |.+|...|++++|+..|++++++.+. ...++.++|.+|...|++++|+
T Consensus 32 ~~~~A~~~~~~a--------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~ 97 (292)
T 1qqe_A 32 KFEEAADLCVQA--------------ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAV 97 (292)
T ss_dssp HHHHHHHHHHHH--------------HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHH--------------HHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 599999999887 66788999999999999999998432 2678999999999999999999
Q ss_pred HHHHHHHhcCCCC------hHHHHHHHHHHHHh-hCHHHHHHHHHHHHcccccc------HHHHHHHHHHHHhcCcHHHH
Q psy9209 165 YYYKQAHMVRPND------PRMLTALGEAFEKQ-EKISEAMKCYNKSRAIGDAD------GKALFKLAKLYDKLNETEAA 231 (349)
Q Consensus 165 ~~~~~~~~~~~~~------~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A 231 (349)
.+|++++.+.|.. ..++..+|.+|... |++++|+.+|++++++.|.. ..++..+|.++..+|++++|
T Consensus 98 ~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 177 (292)
T 1qqe_A 98 DSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEA 177 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999987653 35889999999996 99999999999999997754 56789999999999999999
Q ss_pred HHHHHHHHhcccccCCCCCC-cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHH-----HHHHHHHHH--HcC
Q psy9209 232 ADLFMEFVSKLDTFAAPPDK-TCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEA-----KSLLRSIAQ--KRQ 303 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-----~~~l~~~~~--~~~ 303 (349)
+..|++++...|.. ... .....++..+|.++..+|++++|+.+|+++++++|+.... ...++..+. ..+
T Consensus 178 ~~~~~~al~~~~~~---~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~ 254 (292)
T 1qqe_A 178 SDIYSKLIKSSMGN---RLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSE 254 (292)
T ss_dssp HHHHHHHHHTTSSC---TTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhcC---CcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHH
Confidence 99999999998872 111 1234578999999999999999999999999999976543 233445443 356
Q ss_pred CCCCchhHHHHhhhcCCCCCC
Q psy9209 304 PDESSSQPMECAVVLDPVPPS 324 (349)
Q Consensus 304 ~~~~A~~~~~~a~~~~p~~~~ 324 (349)
++++|+..|++++.++|....
T Consensus 255 ~~~~A~~~~~~~~~l~~~~~~ 275 (292)
T 1qqe_A 255 QLSEHCKEFDNFMRLDKWKIT 275 (292)
T ss_dssp THHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHHhccCCccHHHHHH
Confidence 678899999999888886543
No 79
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.92 E-value=8.5e-24 Score=169.47 Aligned_cols=213 Identities=13% Similarity=0.027 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcc---cHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPN---YLGVWTLL 116 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~l 116 (349)
..++.+|..++..|++++|+..|++++...|+++.....+..++.++...|++++|+..|+++++..|+ .+.+++.+
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l 95 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYER 95 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHH
Confidence 356666666666666666666666666666555222222333334444455666666666666655443 23455555
Q ss_pred HHHHHh--------cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 117 GHEYME--------MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 117 a~~~~~--------~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
|.++.. .|++++|+..|+++++..|++..+...+..+....+.. ...++.+|.+|
T Consensus 96 g~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~-----------------~~~~~~la~~~ 158 (261)
T 3qky_A 96 AMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKL-----------------ARKQYEAARLY 158 (261)
T ss_dssp HHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHH-----------------HHHHHHHHHHH
T ss_pred HHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHH-----------------HHHHHHHHHHH
Confidence 655555 55555555555555555555443332222221111111 12248889999
Q ss_pred HHhhCHHHHHHHHHHHHccccc---cHHHHHHHHHHHHhc----------CcHHHHHHHHHHHHhcccccCCCCCCcchH
Q psy9209 189 EKQEKISEAMKCYNKSRAIGDA---DGKALFKLAKLYDKL----------NETEAAADLFMEFVSKLDTFAAPPDKTCGF 255 (349)
Q Consensus 189 ~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~l~~~~~~~----------~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 255 (349)
...|++++|+..|+++++..|+ .+.+++.+|.++..+ |++++|+..|++++...|+ ++...
T Consensus 159 ~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~------~~~~~ 232 (261)
T 3qky_A 159 ERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPD------SPLLR 232 (261)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTT------CTHHH
T ss_pred HHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCC------ChHHH
Confidence 9999999999999999999887 567899999999877 8999999999999999987 34456
Q ss_pred HHHHHHHHHHHHhCCHHHHH
Q psy9209 256 FAFKYLANHHLKANNLDTAY 275 (349)
Q Consensus 256 ~~~~~l~~~~~~~g~~~~A~ 275 (349)
.+...++.++...++++++.
T Consensus 233 ~a~~~l~~~~~~~~~~~~~~ 252 (261)
T 3qky_A 233 TAEELYTRARQRLTELEGDA 252 (261)
T ss_dssp HHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHhhhhh
Confidence 77778888888777766543
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.92 E-value=4.4e-24 Score=193.08 Aligned_cols=188 Identities=13% Similarity=-0.023 Sum_probs=172.6
Q ss_pred hhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHH--------hhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q psy9209 67 QHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRAL--------KLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 67 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~--------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 138 (349)
..+|+++.+....+ ...|++++|+..+++++ +.+|++..++..+|.++...|++++|+..|+++++
T Consensus 388 ~~~p~~~~a~~~~a------~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~ 461 (681)
T 2pzi_A 388 LVDPTDVAASVLQA------TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAE 461 (681)
T ss_dssp CCCTTSTTHHHHHH------TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHhhc------ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhc
Confidence 34666666544332 45699999999999999 89999999999999999999999999999999999
Q ss_pred hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHH
Q psy9209 139 INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKL 218 (349)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 218 (349)
.+|++..+++.+|.++...|++++|+..|+++++++|+++.++.++|.++...|++++ +..|+++++.+|+++.+++++
T Consensus 462 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~l 540 (681)
T 2pzi_A 462 RVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGL 540 (681)
T ss_dssp HHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC
Q psy9209 219 AKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN 270 (349)
Q Consensus 219 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 270 (349)
|.++..+|++++|+..|+++++++|. ...++.++|.++...++
T Consensus 541 g~~~~~~g~~~~A~~~~~~al~l~P~---------~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 541 ARARSAEGDRVGAVRTLDEVPPTSRH---------FTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCTTSTT---------HHHHHHHHHHHTC----
T ss_pred HHHHHHcCCHHHHHHHHHhhcccCcc---------cHHHHHHHHHHHHccCC
Confidence 99999999999999999999999998 89999999999987665
No 81
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.92 E-value=9.1e-23 Score=172.22 Aligned_cols=277 Identities=9% Similarity=-0.059 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHH--HHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccH------H
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEE--AKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYL------G 111 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~ 111 (349)
.++..+|.++...|++++|+..+++++...|.... ....+..++..+...|++++|+..+++++.+.|... .
T Consensus 15 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALW 94 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 56778899999999999999999999987664422 222345556666667999999999999998765432 3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhC--------cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC-----h
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEIN--------NLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND-----P 178 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~ 178 (349)
++..+|.++...|++++|+..++++++.. |....++..+|.++...|++++|..++++++...+.. .
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 46889999999999999999999999874 3456678889999999999999999999999987653 3
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHccccc--cHHHH-----HHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCC
Q psy9209 179 RMLTALGEAFEKQEKISEAMKCYNKSRAIGDA--DGKAL-----FKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDK 251 (349)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~-----~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 251 (349)
.++..+|.++...|++++|..++++++...+. .+..+ ..++.++...|++++|...+++++...+. ..
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~-----~~ 249 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA-----NN 249 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCT-----TC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCC-----cc
Confidence 57889999999999999999999999876322 21111 13456688999999999999999876543 11
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC------hHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCC
Q psy9209 252 TCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET------AEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPV 321 (349)
Q Consensus 252 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 321 (349)
......+..+|.++...|++++|...+++++...+. ...++..++.++...|+.++|...+++++.+.+.
T Consensus 250 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~~~~ 325 (373)
T 1hz4_A 250 HFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANR 325 (373)
T ss_dssp GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcc
Confidence 112446788999999999999999999999876432 2357788999999999999999999999887654
No 82
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.92 E-value=3.9e-24 Score=173.21 Aligned_cols=232 Identities=16% Similarity=0.114 Sum_probs=182.2
Q ss_pred CCcchHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh--------CcccHHHHHHHH
Q psy9209 88 PDESSSQAVLYFQRALKL--------NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI--------NNLDYRAWYGLG 151 (349)
Q Consensus 88 ~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~ 151 (349)
..|++++|+.+|+++++. .|..+.++..+|.++...|++++|+.+++++++. .|....++..+|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 357777777777777763 3566788899999999999999999999999887 466788899999
Q ss_pred HHHHHhCCHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc--------ccccHHHH
Q psy9209 152 QTYEILRLPYYGLYYYKQAHMV--------RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI--------GDADGKAL 215 (349)
Q Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~ 215 (349)
.++...|++++|+.++++++.. +|....++..+|.++...|++++|+.++++++.. .|....++
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999987 4566788899999999999999999999999988 77778899
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC------HHHHHHHHHHHHcccCChH
Q psy9209 216 FKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN------LDTAYKCAQKCLQHEETAE 289 (349)
Q Consensus 216 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------~~~A~~~~~~a~~~~~~~~ 289 (349)
..+|.++...|++++|+..+++++...+........+.....+..++..+...+. +.++...++......|...
T Consensus 173 ~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (283)
T 3edt_B 173 NNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVN 252 (283)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHH
Confidence 9999999999999999999999998755422222233355667777777666544 4444444444444557778
Q ss_pred HHHHHHHHHHHHcCCCCCchhHHHHhhhcC
Q psy9209 290 EAKSLLRSIAQKRQPDESSSQPMECAVVLD 319 (349)
Q Consensus 290 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 319 (349)
.++..+|.++..+|++++|+.+|+++++..
T Consensus 253 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 253 TTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 889999999999999999999999998753
No 83
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.91 E-value=8.6e-23 Score=176.09 Aligned_cols=281 Identities=12% Similarity=0.081 Sum_probs=197.2
Q ss_pred hhhHHhhCcH---HHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcC-----CHHHHHHHHHHHhhhhhchHH
Q psy9209 3 NKLYDKLNET---EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKAN-----NLDTAYKCAQKCLQHEETAEE 74 (349)
Q Consensus 3 a~~~~~~g~~---~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~A~~~~~~~l~~~~~~~~ 74 (349)
|.+|...|+. ++|+.+|+++++. .+ .+++.+|.++...| ++++|+.+|++++...+. .
T Consensus 42 g~~y~~~g~~~d~~~A~~~~~~A~~~------~~------~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~~--~ 107 (452)
T 3e4b_A 42 ADIQVGTRDPAQIKQAEATYRAAADT------SP------RAQARLGRLLAAKPGATEAEHHEAESLLKKAFANGEG--N 107 (452)
T ss_dssp C----------------------------------------CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHTTCS--S
T ss_pred HHHHHccCCCCCHHHHHHHHHHHHhC------CH------HHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHCCCH--H
Confidence 5667777777 8999999888832 22 45788888666665 788899999988764322 2
Q ss_pred HHHHHHHHH--------------------------------HhcCCCc----chHHHHHHHHHHHhhCcccHHHHHHHHH
Q psy9209 75 AKSLLRSIA--------------------------------QKRQPDE----SSSQAVLYFQRALKLNPNYLGVWTLLGH 118 (349)
Q Consensus 75 ~~~~l~~~~--------------------------------~~~~~~~----~~~~A~~~~~~~~~~~~~~~~~~~~la~ 118 (349)
+...++.+. ..+...+ +.+.+..+++.+...+|. +++.+|.
T Consensus 108 A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~~~~---a~~~Lg~ 184 (452)
T 3e4b_A 108 TLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAALNTTDI---CYVELAT 184 (452)
T ss_dssp CHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTTCTT---HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHcCCHH---HHHHHHH
Confidence 222232221 1111112 344444555555554444 8899999
Q ss_pred HHHhcC---ChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhcCCCChHHHHHHHHH-H--
Q psy9209 119 EYMEMK---NTNAAIQCYRQAIEINNLDYRAWYGLGQTYEIL----RLPYYGLYYYKQAHMVRPNDPRMLTALGEA-F-- 188 (349)
Q Consensus 119 ~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~-~-- 188 (349)
+|...| ++++|+..|+++.+..|.....++.+|.+|... +++++|+.+|+++. |+++.+++.+|.+ +
T Consensus 185 ~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~ 261 (452)
T 3e4b_A 185 VYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDF 261 (452)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHS
T ss_pred HHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhC
Confidence 999999 999999999999999998888889999998765 78999999999988 8899999999998 4
Q ss_pred HHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHH
Q psy9209 189 EKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN-----ETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLAN 263 (349)
Q Consensus 189 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-----~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (349)
...+++++|+.+|+++.+.. ++.+++.+|.+|. .| ++++|+.+|+++. +. .+.+++.||.
T Consensus 262 ~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g---------~~~A~~~Lg~ 326 (452)
T 3e4b_A 262 PELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GR---------EVAADYYLGQ 326 (452)
T ss_dssp GGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TT---------CHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CC---------CHHHHHHHHH
Confidence 46889999999999998654 7889999999988 55 8999999999988 55 6899999998
Q ss_pred HHHH----hCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH----cCCCCCchhHHHHhhhcCC
Q psy9209 264 HHLK----ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK----RQPDESSSQPMECAVVLDP 320 (349)
Q Consensus 264 ~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~p 320 (349)
+|.. ..++++|+.+|+++.+. .++.+...+|.++.. ..+..+|..+|+++.+..+
T Consensus 327 ~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~ 389 (452)
T 3e4b_A 327 IYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDT 389 (452)
T ss_dssp HHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCC
T ss_pred HHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCC
Confidence 8887 34999999999999874 557788889998874 3467788999988877654
No 84
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.91 E-value=5.3e-23 Score=166.55 Aligned_cols=234 Identities=17% Similarity=0.103 Sum_probs=188.3
Q ss_pred HhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-----hchHHHHHHHHH
Q psy9209 7 DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE-----ETAEEAKSLLRS 81 (349)
Q Consensus 7 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~-----~~~~~~~~~l~~ 81 (349)
...|++++|+..|+++++....... ++......++..+|.++...|++++|+.++++++... ++++.....+..
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSG-HDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHC-SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 4578899999999999975543322 2223334789999999999999999999999999875 334555556777
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh--------CcccHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKL--------NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI--------NNLDYR 145 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~ 145 (349)
++.++...|++++|+.++++++.. +|....++..+|.++...|++++|+.+++++++. .|....
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 170 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAK 170 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 778888899999999999999988 5777889999999999999999999999999998 788889
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhc---------CCCChHHHHHHHHHHHHhhC------HHHHHHHHHHHHccccc
Q psy9209 146 AWYGLGQTYEILRLPYYGLYYYKQAHMV---------RPNDPRMLTALGEAFEKQEK------ISEAMKCYNKSRAIGDA 210 (349)
Q Consensus 146 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~------~~~A~~~~~~a~~~~~~ 210 (349)
++..+|.++...|++++|+.+++++++. .+.....+..++..+...+. +.++...++......|.
T Consensus 171 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T 3edt_B 171 TKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPT 250 (283)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHH
Confidence 9999999999999999999999999986 45556677777777665443 45555555555555677
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q psy9209 211 DGKALFKLAKLYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 241 (349)
.+.++..+|.++...|++++|+..++++++.
T Consensus 251 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 251 VNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999875
No 85
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.91 E-value=8.3e-23 Score=154.69 Aligned_cols=168 Identities=15% Similarity=0.103 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK 190 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 190 (349)
..+..+|.++...|++++|+..++++++..|.+..++..+|.++...|++++|+.+++++++..|.++.++..+|.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ 88 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC
Q psy9209 191 QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN 270 (349)
Q Consensus 191 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 270 (349)
.|++++|+.++++++...|.++.++..+|.++...|++++|+..+++++...|. ...++..+|.++...|+
T Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~la~~~~~~~~ 159 (186)
T 3as5_A 89 VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN---------EGKVHRAIAFSYEQMGR 159 (186)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCcc---------chHHHHHHHHHHHHcCC
Confidence 555555555555555555555555555555555555555555555555555444 34555555555555555
Q ss_pred HHHHHHHHHHHHcccCC
Q psy9209 271 LDTAYKCAQKCLQHEET 287 (349)
Q Consensus 271 ~~~A~~~~~~a~~~~~~ 287 (349)
+++|..+++++++..|+
T Consensus 160 ~~~A~~~~~~~~~~~~~ 176 (186)
T 3as5_A 160 HEEALPHFKKANELDEG 176 (186)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 55555555555544443
No 86
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.91 E-value=5.7e-23 Score=158.58 Aligned_cols=183 Identities=10% Similarity=0.011 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
..++..|..++..|++++|+..|++++..+|+++.++...+ . ... ....+.....+|.+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~-----~---~~~-------------~~~~~~~~~~lg~~ 63 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTN-----V---DKN-------------SEISSKLATELALA 63 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHH-----S---CTT-------------SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhh-----h---cch-------------hhhhHHHHHHHHHH
Confidence 57888999999999999999999999999999888765432 0 000 01123445678999
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhC--HHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEK--ISEA 197 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~A 197 (349)
+...|++++|+..|+++++++|+++.++..+|.++...|++++|+..|+++++++|+++.++..+|.+|...|+ ...+
T Consensus 64 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 143 (208)
T 3urz_A 64 YKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKL 143 (208)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877654 4566
Q ss_pred HHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 198 MKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 198 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
...+++++...| ...+++.+|.++...|++++|+..|++++.+.|+
T Consensus 144 ~~~~~~~~~~~~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 189 (208)
T 3urz_A 144 ETDYKKLSSPTK-MQYARYRDGLSKLFTTRYEKARNSLQKVILRFPS 189 (208)
T ss_dssp HHHHC---CCCH-HHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHhCCCc-hhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 777877765544 3446778899999999999999999999999886
No 87
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.91 E-value=3.4e-24 Score=156.28 Aligned_cols=147 Identities=16% Similarity=0.137 Sum_probs=136.3
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCH
Q psy9209 115 LLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKI 194 (349)
Q Consensus 115 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 194 (349)
.||.++...|++++|+..+++++..+|+++..++.+|.+|...|++++|+.+|+++++++|+++.++..+|.++...|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHH-HHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC
Q psy9209 195 SEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADL-FMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN 270 (349)
Q Consensus 195 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 270 (349)
++|+..|+++++++|+++.++..+|.++...|++++|... ++++++++|+ ++.++..++.++..+|+
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~---------~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPG---------SPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcC---------CHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999999887765 5999999999 79999999999988885
No 88
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.91 E-value=8.4e-23 Score=154.65 Aligned_cols=174 Identities=13% Similarity=0.039 Sum_probs=167.4
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHH
Q psy9209 143 DYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLY 222 (349)
Q Consensus 143 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 222 (349)
....+..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+.+++++++..|.++.++..+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTY 86 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHc
Q psy9209 223 DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKR 302 (349)
Q Consensus 223 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 302 (349)
...|++++|...+++++...|. ...++..+|.++...|++++|+.+++++++..|.++.++..++.++...
T Consensus 87 ~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (186)
T 3as5_A 87 VQVQKYDLAVPLLIKVAEANPI---------NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQM 157 (186)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHHHhcCcH---------hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHc
Confidence 9999999999999999999988 7899999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHhhhcCCCCCCc
Q psy9209 303 QPDESSSQPMECAVVLDPVPPST 325 (349)
Q Consensus 303 ~~~~~A~~~~~~a~~~~p~~~~~ 325 (349)
|++++|..+++++++.+|++...
T Consensus 158 ~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 158 GRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp TCHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCHHHHHHHHHHHHHcCCCchhh
Confidence 99999999999999999987654
No 89
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.89 E-value=5.7e-20 Score=148.77 Aligned_cols=241 Identities=10% Similarity=0.049 Sum_probs=204.7
Q ss_pred HHHhcCCHH-HHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCC-------cchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 48 HHLKANNLD-TAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPD-------ESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 48 ~~~~~~~~~-~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
.....|++. +|+..+.+++..+|++..+|...+.+....... ..+++++.++..++..+|++..+|...+.+
T Consensus 38 ~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wl 117 (331)
T 3dss_A 38 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 117 (331)
T ss_dssp HHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 334567765 799999999999999999988776665443110 127899999999999999999999999999
Q ss_pred HHhcCC--hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCC-HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh-----
Q psy9209 120 YMEMKN--TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRL-PYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQ----- 191 (349)
Q Consensus 120 ~~~~~~--~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 191 (349)
+...|+ +++++.++.++++.+|.+..+|...+.+....|. +++++.++.++++.+|.+..+|...+.++...
T Consensus 118 L~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~ 197 (331)
T 3dss_A 118 LSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPD 197 (331)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC-
T ss_pred HhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccc
Confidence 999994 8999999999999999999999999999999999 59999999999999999999999999999888
Q ss_pred ---------hCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc-----------CcHHHHHHHHHHHHhcccccCCCCCC
Q psy9209 192 ---------EKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL-----------NETEAAADLFMEFVSKLDTFAAPPDK 251 (349)
Q Consensus 192 ---------~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~~~~~~ 251 (349)
+.++++++++.+++..+|++..+|+.+..++... +.++++++.++++++..|+
T Consensus 198 ~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd------- 270 (331)
T 3dss_A 198 SGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPE------- 270 (331)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTT-------
T ss_pred cccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcc-------
Confidence 6799999999999999999999998665555544 4688999999999999998
Q ss_pred cchHHHHHHHHHHHH---HhCCHHHHHHHHHHHHcccCChHHHHHHHHH
Q psy9209 252 TCGFFAFKYLANHHL---KANNLDTAYKCAQKCLQHEETAEEAKSLLRS 297 (349)
Q Consensus 252 ~~~~~~~~~l~~~~~---~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 297 (349)
...++..++.+.. ..|..++...++.+.++++|.....+.-++.
T Consensus 271 --~~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Dp~r~~~y~d~~~ 317 (331)
T 3dss_A 271 --NKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 317 (331)
T ss_dssp --CHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred --cchHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCcchhhHHHHHHH
Confidence 5555544444332 3578889999999999999988777666544
No 90
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.89 E-value=1.4e-21 Score=152.74 Aligned_cols=190 Identities=9% Similarity=-0.074 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChH---HHHH
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD---YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPR---MLTA 183 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~---~~~~ 183 (349)
+..++.+|..+...|++++|+..|+++++..|.+ ..+++.+|.++...|++++|+..|+++++.+|+++. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 3445555555555666666666666665555543 345555566666666666666666666655555543 4555
Q ss_pred HHHHHHH------------------hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhccccc
Q psy9209 184 LGEAFEK------------------QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTF 245 (349)
Q Consensus 184 l~~~~~~------------------~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 245 (349)
+|.++.. .|++++|+..|+++++..|+++.+...+..+.. +...
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~-----------------~~~~- 145 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVF-----------------LKDR- 145 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHH-----------------HHHH-
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHH-----------------HHHH-
Confidence 5555544 567888888888888888777654432211110 0111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChH---HHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 246 AAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAE---EAKSLLRSIAQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
.......+|.++...|++++|+..|+++++..|+++ .++..++.++..+|++++|+..++++....|++
T Consensus 146 --------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~ 217 (225)
T 2yhc_A 146 --------LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT 217 (225)
T ss_dssp --------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCC
T ss_pred --------HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCc
Confidence 234456778888888888888888888888877654 678888888888888888888888888888876
Q ss_pred CCc
Q psy9209 323 PST 325 (349)
Q Consensus 323 ~~~ 325 (349)
..-
T Consensus 218 ~~~ 220 (225)
T 2yhc_A 218 LEH 220 (225)
T ss_dssp CCC
T ss_pred hhh
Confidence 653
No 91
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.89 E-value=7.2e-21 Score=154.00 Aligned_cols=225 Identities=10% Similarity=0.021 Sum_probs=199.5
Q ss_pred cch-HHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCC----------hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC
Q psy9209 90 ESS-SQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKN----------TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR 158 (349)
Q Consensus 90 ~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 158 (349)
|.+ ++|+..+.+++.++|++..+|+..+.+....+. +++++.++..++..+|++..+|...+.++...+
T Consensus 43 ~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~ 122 (331)
T 3dss_A 43 GELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 122 (331)
T ss_dssp TCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccC
Confidence 454 589999999999999999999999999988776 689999999999999999999999999999999
Q ss_pred C--HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhC-HHHHHHHHHHHHccccccHHHHHHHHHHHHhc----------
Q psy9209 159 L--PYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEK-ISEAMKCYNKSRAIGDADGKALFKLAKLYDKL---------- 225 (349)
Q Consensus 159 ~--~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~---------- 225 (349)
+ +++++.++.++++.+|.+..+|...+.+....|. +++++.++.++++.+|.+..+|..++.+....
T Consensus 123 ~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~ 202 (331)
T 3dss_A 123 EPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQG 202 (331)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------
T ss_pred cccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhcccccccc
Confidence 5 8999999999999999999999999999999999 69999999999999999999999999998877
Q ss_pred ----CcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHcccCChHH
Q psy9209 226 ----NETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA-----------NNLDTAYKCAQKCLQHEETAEE 290 (349)
Q Consensus 226 ----~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~a~~~~~~~~~ 290 (349)
+.++++++++.+++..+|+ +..+|+.+..++... +.++++++.+++++++.|++..
T Consensus 203 ~~~~~~~~eEle~~~~ai~~~P~---------d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~w 273 (331)
T 3dss_A 203 RLPENVLLKELELVQNAFFTDPN---------DQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENKW 273 (331)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred ccchHHHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccch
Confidence 5689999999999999999 899998776666665 4689999999999999999865
Q ss_pred HHHHHHHHHH---HcCCCCCchhHHHHhhhcCCCCC
Q psy9209 291 AKSLLRSIAQ---KRQPDESSSQPMECAVVLDPVPP 323 (349)
Q Consensus 291 ~~~~l~~~~~---~~~~~~~A~~~~~~a~~~~p~~~ 323 (349)
....++.+.. ..|..++...++.+.+++||...
T Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Dp~r~ 309 (331)
T 3dss_A 274 CLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRA 309 (331)
T ss_dssp HHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHHHHHHhCcchh
Confidence 5544444332 24556688899999999999754
No 92
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.88 E-value=8.8e-22 Score=138.69 Aligned_cols=122 Identities=12% Similarity=0.084 Sum_probs=110.7
Q ss_pred HHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHH
Q psy9209 101 RALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRM 180 (349)
Q Consensus 101 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (349)
++..++|+.+..+..+|..+...|++++|+..|+++++++|.++.++.++|.++..+|++++|+..++++++++|+++.+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHH
Q psy9209 181 LTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLY 222 (349)
Q Consensus 181 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 222 (349)
+..+|.++..+|++++|+..|+++++++|++..++..++.++
T Consensus 84 ~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 84 YIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999998888763
No 93
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.88 E-value=2.7e-21 Score=151.16 Aligned_cols=155 Identities=12% Similarity=-0.039 Sum_probs=129.0
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHH---HHH
Q psy9209 143 DYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP---RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGK---ALF 216 (349)
Q Consensus 143 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---~~~ 216 (349)
.+..++.+|..+...|++++|+..|++++...|.++ .+++.+|.++...|++++|+..|+++++..|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 467889999999999999999999999999998875 68999999999999999999999999999998764 788
Q ss_pred HHHHHHHh------------------cCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHH
Q psy9209 217 KLAKLYDK------------------LNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCA 278 (349)
Q Consensus 217 ~l~~~~~~------------------~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 278 (349)
.+|.++.. .|++++|+..|++++...|+. +....+...++.+..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~------~~a~~a~~~l~~~~~------------ 144 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS------QYTTDATKRLVFLKD------------ 144 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTC------TTHHHHHHHHHHHHH------------
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC------hhHHHHHHHHHHHHH------------
Confidence 99998876 679999999999999999982 222233333333221
Q ss_pred HHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCC
Q psy9209 279 QKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPP 323 (349)
Q Consensus 279 ~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 323 (349)
........+|.++...|++++|+..|+++++..|+++
T Consensus 145 --------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 145 --------RLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp --------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred --------HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 1122346789999999999999999999999999986
No 94
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.88 E-value=8.3e-22 Score=147.95 Aligned_cols=169 Identities=9% Similarity=-0.073 Sum_probs=134.4
Q ss_pred cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy9209 107 PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGE 186 (349)
Q Consensus 107 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 186 (349)
|.....+..+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++...| ++..+..++.
T Consensus 3 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~ 81 (176)
T 2r5s_A 3 ASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAK 81 (176)
T ss_dssp ---CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHH
Confidence 344456778888888888888888888888888888888888888888888888888888888888888 7766655554
Q ss_pred HHH-HhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHH
Q psy9209 187 AFE-KQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHH 265 (349)
Q Consensus 187 ~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 265 (349)
+.. ..+...+|+..++++++.+|+++.+++.+|.++...|++++|+..|++++...|.. ....++..+|.++
T Consensus 82 ~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~-------~~~~a~~~l~~~~ 154 (176)
T 2r5s_A 82 LELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA-------QDGEVKKTFMDIL 154 (176)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT-------TTTHHHHHHHHHH
T ss_pred HHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-------ChHHHHHHHHHHH
Confidence 433 33344557888888888888888888888988888899999999998888888761 1256888888888
Q ss_pred HHhCCHHHHHHHHHHHHc
Q psy9209 266 LKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 266 ~~~g~~~~A~~~~~~a~~ 283 (349)
...|+.++|+..|++++.
T Consensus 155 ~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 155 SALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHCSSCHHHHHHHHHHH
T ss_pred HHhCCCCcHHHHHHHHHH
Confidence 888888888888888764
No 95
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.88 E-value=5.4e-21 Score=156.69 Aligned_cols=240 Identities=15% Similarity=0.116 Sum_probs=185.6
Q ss_pred hcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHH
Q psy9209 51 KANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAI 130 (349)
Q Consensus 51 ~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 130 (349)
..|++++|..+++++.+..+.. .+...+++++|+..|.++ |.+|...|++++|+
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~------------~~~~~~~~~~A~~~~~~a--------------~~~~~~~g~~~~A~ 56 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTS------------FMKWKPDYDSAASEYAKA--------------AVAFKNAKQLEQAK 56 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCC------------SSSCSCCHHHHHHHHHHH--------------HHHHHHTTCHHHHH
T ss_pred ccchHHHHHHHHHHHHHHcccc------------ccCCCCCHHHHHHHHHHH--------------HHHHHHcCCHHHHH
Confidence 4678889999999988766531 111148899999988876 66888999999999
Q ss_pred HHHHHHHHhCccc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--C----hHHHHHHHHHHHHhhCHHHHH
Q psy9209 131 QCYRQAIEINNLD------YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN--D----PRMLTALGEAFEKQEKISEAM 198 (349)
Q Consensus 131 ~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~----~~~~~~l~~~~~~~~~~~~A~ 198 (349)
..|.+++++.+.. ..++..+|.+|...|++++|+.+|++++++.+. + ..++.++|.+|.. |++++|+
T Consensus 57 ~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~ 135 (307)
T 2ifu_A 57 DAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAV 135 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHH
Confidence 9999999986532 568889999999999999999999999988432 2 3678899999998 9999999
Q ss_pred HHHHHHHcccccc------HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHH
Q psy9209 199 KCYNKSRAIGDAD------GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLD 272 (349)
Q Consensus 199 ~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 272 (349)
.+|++++.+.|.. ..++.++|.++..+|++++|+..|++++.+.|.. ........++..+|.++..+|+++
T Consensus 136 ~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~~g~~~~~~g~~~ 212 (307)
T 2ifu_A 136 HLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM---ENYPTCYKKCIAQVLVQLHRADYV 212 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc---CChhHHHHHHHHHHHHHHHcCCHH
Confidence 9999999987643 5788999999999999999999999999988762 222234568889999999999999
Q ss_pred HHHHHHHHHHcccCChH-----HHHHHHHHHHHHcCCCCCchh--HHHHhhhcCCCC
Q psy9209 273 TAYKCAQKCLQHEETAE-----EAKSLLRSIAQKRQPDESSSQ--PMECAVVLDPVP 322 (349)
Q Consensus 273 ~A~~~~~~a~~~~~~~~-----~~~~~l~~~~~~~~~~~~A~~--~~~~a~~~~p~~ 322 (349)
+|+.+|++++ +.|... .....++..+ ..|+.+.... .+..+..++|..
T Consensus 213 ~A~~~~~~al-~~p~~~~~~e~~~l~~l~~~~-~~~d~~~~~~~~~~~~~~~ld~~~ 267 (307)
T 2ifu_A 213 AAQKCVRESY-SIPGFSGSEDCAALEDLLQAY-DEQDEEQLLRVCRSPLVTYMDNDY 267 (307)
T ss_dssp HHHHHHHHHT-TSTTSTTSHHHHHHHHHHHHH-HTTCHHHHHHHTTSHHHHTSCHHH
T ss_pred HHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHH-HhcCHHHHHHHHhCchhhhhhHHH
Confidence 9999999999 888543 2233444444 3455432222 134444455443
No 96
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.87 E-value=3.3e-20 Score=150.73 Aligned_cols=224 Identities=11% Similarity=0.078 Sum_probs=196.9
Q ss_pred CcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh-C-CHHHHHH
Q psy9209 89 DESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMK-NTNAAIQCYRQAIEINNLDYRAWYGLGQTYEIL-R-LPYYGLY 165 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~-~~~~A~~ 165 (349)
.+..++|+..+.+++.++|++..+|+..+.++...| .+++++..+.+++..+|++..+|...+.++... + ++++++.
T Consensus 67 ~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~ 146 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIE 146 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHH
Confidence 456688999999999999999999999999999999 599999999999999999999999999999998 8 8999999
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHhhCHH--------HHHHHHHHHHccccccHHHHHHHHHHHHhcCc-------HHH
Q psy9209 166 YYKQAHMVRPNDPRMLTALGEAFEKQEKIS--------EAMKCYNKSRAIGDADGKALFKLAKLYDKLNE-------TEA 230 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-------~~~ 230 (349)
++.++++.+|.+..+|...+.++...|.++ +++++++++++.+|.+..+|..++.+....+. +++
T Consensus 147 ~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~e 226 (349)
T 3q7a_A 147 YIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQD 226 (349)
T ss_dssp HHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHH
Confidence 999999999999999999999999999888 99999999999999999999999999999887 799
Q ss_pred HHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCH--------------------HHHHHHHHHHHccc-----
Q psy9209 231 AADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNL--------------------DTAYKCAQKCLQHE----- 285 (349)
Q Consensus 231 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------------------~~A~~~~~~a~~~~----- 285 (349)
+++++.+++..+|. +..+|+.+..++...|+. ..-.......+...
T Consensus 227 ELe~~~~aI~~~P~---------n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (349)
T 3q7a_A 227 ELIYILKSIHLIPH---------NVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDT 297 (349)
T ss_dssp HHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSC
T ss_pred HHHHHHHHHHhCCC---------CHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhccccccc
Confidence 99999999999999 899999999999888764 22333333333222
Q ss_pred -CChHHHHHHHHHHHHHcCCCCCchhHHHHhh-hcCCC
Q psy9209 286 -ETAEEAKSLLRSIAQKRQPDESSSQPMECAV-VLDPV 321 (349)
Q Consensus 286 -~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~-~~~p~ 321 (349)
+.++.++..++.++...|+.++|.+.++... +.||-
T Consensus 298 ~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~~~~dpi 335 (349)
T 3q7a_A 298 PLPVPLALEYLADSFIEQNRVDDAAKVFEKLSSEYDQM 335 (349)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGG
T ss_pred CCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhChH
Confidence 4678899999999999999999999999976 66664
No 97
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.87 E-value=1.3e-20 Score=152.75 Aligned_cols=172 Identities=12% Similarity=-0.019 Sum_probs=161.2
Q ss_pred hCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 184 (349)
..|.+...+..+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++..+|+........
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHH
T ss_pred HcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHH
Confidence 34888999999999999999999999999999999999999999999999999999999999999999999777777778
Q ss_pred HHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHH
Q psy9209 185 GEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANH 264 (349)
Q Consensus 185 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (349)
+..+...++.++|+..+++++..+|+++.+++.+|.++...|++++|+..|++++..+|+. ....++..++.+
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~-------~~~~a~~~l~~~ 264 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA-------ADGQTRXTFQEI 264 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG-------GGGHHHHHHHHH
T ss_pred HHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc-------ccchHHHHHHHH
Confidence 8888999999999999999999999999999999999999999999999999999999971 128899999999
Q ss_pred HHHhCCHHHHHHHHHHHHc
Q psy9209 265 HLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 265 ~~~~g~~~~A~~~~~~a~~ 283 (349)
+...|+.++|...|++++.
T Consensus 265 ~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 265 LAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHCTTCHHHHHHHHHHH
T ss_pred HHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999875
No 98
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.86 E-value=1.9e-21 Score=145.98 Aligned_cols=167 Identities=10% Similarity=-0.084 Sum_probs=148.6
Q ss_pred cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHH
Q psy9209 141 NLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAK 220 (349)
Q Consensus 141 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 220 (349)
|.....+..+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++...| ++..+..++.
T Consensus 3 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~ 81 (176)
T 2r5s_A 3 ASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAK 81 (176)
T ss_dssp ---CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHH
Confidence 444556789999999999999999999999999999999999999999999999999999999999999 8777666665
Q ss_pred HHH-hcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh--HHHHHHHHH
Q psy9209 221 LYD-KLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA--EEAKSLLRS 297 (349)
Q Consensus 221 ~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~l~~ 297 (349)
+.. ..+...+|+..+++++..+|+ .+.+++.+|.++...|++++|+..|+++++.+|+. ..++..++.
T Consensus 82 ~~~~~~~~~~~a~~~~~~al~~~P~---------~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~ 152 (176)
T 2r5s_A 82 LELHQQAAESPELKRLEQELAANPD---------NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMD 152 (176)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHH
T ss_pred HHHHhhcccchHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHH
Confidence 533 333445689999999999998 79999999999999999999999999999999875 569999999
Q ss_pred HHHHcCCCCCchhHHHHhhh
Q psy9209 298 IAQKRQPDESSSQPMECAVV 317 (349)
Q Consensus 298 ~~~~~~~~~~A~~~~~~a~~ 317 (349)
++...|+.++|+..|++++.
T Consensus 153 ~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 153 ILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999875
No 99
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.86 E-value=1.9e-19 Score=146.29 Aligned_cols=256 Identities=12% Similarity=0.018 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCc-chHHHHHHHHHHHhhCcccHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDE-SSSQAVLYFQRALKLNPNYLGVWTLLGH 118 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~la~ 118 (349)
.++..+.......+..++|+..+.+++..+|++..+|...+.+.... | .+++++..+.+++..+|++..+|...+.
T Consensus 55 ~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l---~~~l~eEL~~~~~~L~~nPKny~aW~hR~w 131 (349)
T 3q7a_A 55 DAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSL---NKSLEDELRLMNEFAVQNLKSYQVWHHRLL 131 (349)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34555555555666678999999999999999999998877766554 5 6999999999999999999999999999
Q ss_pred HHHhc-C-ChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHH--------HHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 119 EYMEM-K-NTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPY--------YGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 119 ~~~~~-~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~--------~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
++... + ++++++.++.++++.+|++..+|...+.+....|.++ +++++++++++.+|.+..+|...+.++
T Consensus 132 lL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL 211 (349)
T 3q7a_A 132 LLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLR 211 (349)
T ss_dssp HHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99998 8 9999999999999999999999999999999999888 999999999999999999999999999
Q ss_pred HHhhC-------HHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHH----------------H-HHHHHHHHhcccc
Q psy9209 189 EKQEK-------ISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEA----------------A-ADLFMEFVSKLDT 244 (349)
Q Consensus 189 ~~~~~-------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~----------------A-~~~~~~~~~~~~~ 244 (349)
...++ ++++++++++++..+|++..+|+.+..++...|+... . ...-.-++.....
T Consensus 212 ~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (349)
T 3q7a_A 212 VSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSD 291 (349)
T ss_dssp TTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-
T ss_pred HhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhc
Confidence 99887 7999999999999999999999998888887776410 0 1111222222211
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHH-cccCChHHHHHHHHHH
Q psy9209 245 FAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCL-QHEETAEEAKSLLRSI 298 (349)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~-~~~~~~~~~~~~l~~~ 298 (349)
.+........+.++..|+.+|...|+.++|.++++... +.+|-....|...+..
T Consensus 292 ~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~~~~dpir~~yw~~~~~~ 346 (349)
T 3q7a_A 292 PLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLSSEYDQMRAGYWEFRRRE 346 (349)
T ss_dssp CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred ccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhChHHHHHHHHHHHh
Confidence 00011224578899999999999999999999999987 7789888888766543
No 100
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=6.5e-21 Score=134.23 Aligned_cols=122 Identities=12% Similarity=-0.006 Sum_probs=115.2
Q ss_pred HHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHH
Q psy9209 135 QAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKA 214 (349)
Q Consensus 135 ~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 214 (349)
++..++|+....+..+|..+...|++++|+..|+++++++|.++.++..+|.++..+|++++|+..|+++++++|+++.+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHH
Q psy9209 215 LFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHH 265 (349)
Q Consensus 215 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 265 (349)
++.+|.++..+|++++|+..|+++++++|+ +..++..++.++
T Consensus 84 ~~~lg~~~~~~~~~~~A~~~~~~al~l~P~---------~~~a~~~l~~~l 125 (126)
T 4gco_A 84 YIRKAACLVAMREWSKAQRAYEDALQVDPS---------NEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCcC---------CHHHHHHHHHhc
Confidence 999999999999999999999999999999 789998888764
No 101
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.86 E-value=2.4e-20 Score=151.13 Aligned_cols=170 Identities=8% Similarity=-0.067 Sum_probs=162.0
Q ss_pred hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHH
Q psy9209 139 INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKL 218 (349)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 218 (349)
..|.+...+..+|..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++..+|+........
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHH
T ss_pred HcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHH
Confidence 34888999999999999999999999999999999999999999999999999999999999999999999877777778
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh--HHHHHHHH
Q psy9209 219 AKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA--EEAKSLLR 296 (349)
Q Consensus 219 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~l~ 296 (349)
+..+...++.++|+..+++++..+|+ +..+++.+|.++...|++++|+..|+++++.+|+. ..++..++
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P~---------~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENPE---------DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred HHHHHhhcccCccHHHHHHHHhcCCc---------cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 88888999999999999999999999 89999999999999999999999999999999988 89999999
Q ss_pred HHHHHcCCCCCchhHHHHhhh
Q psy9209 297 SIAQKRQPDESSSQPMECAVV 317 (349)
Q Consensus 297 ~~~~~~~~~~~A~~~~~~a~~ 317 (349)
.++...|+.++|...|++++.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999875
No 102
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.86 E-value=1.1e-19 Score=167.88 Aligned_cols=262 Identities=15% Similarity=0.070 Sum_probs=143.4
Q ss_pred hhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q psy9209 3 NKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 82 (349)
Q Consensus 3 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~ 82 (349)
|.++...|.+++|..+|+++- . ....+...+...|++++|.++++++ +.+.+|. .+
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~------~----------~~~A~~VLie~i~nldrAiE~Aerv-----n~p~vWs---qL 1111 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFD------V----------NTSAVQVLIEHIGNLDRAYEFAERC-----NEPAVWS---QL 1111 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcC------C----------HHHHHHHHHHHHhhHHHHHHHHHhc-----CCHHHHH---HH
Confidence 556667777777777776642 0 0111222233556666666666644 2233433 33
Q ss_pred HHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYY 162 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (349)
|.++...|++++|+..|.++ +++..+..+|.++.+.|++++|+++|..+.+..+. +.+-..+|.+|.+++++++
T Consensus 1112 AKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e-~~Idt~LafaYAKl~rlee 1185 (1630)
T 1xi4_A 1112 AKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFALAKTNRLAE 1185 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-ccccHHHHHHHHhhcCHHH
Confidence 44455556666666666554 45566666666666666666666666666665432 2222235666666665553
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q psy9209 163 GLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKL 242 (349)
Q Consensus 163 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 242 (349)
++.|. ...+...+..+|..+...|+|++|+.+|.++ ..|..+|.++.++|++++|++.++++.
T Consensus 1186 -le~fI-----~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~--- 1248 (1630)
T 1xi4_A 1186 -LEEFI-----NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN--- 1248 (1630)
T ss_pred -HHHHH-----hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhC---
Confidence 22221 1222344555666666666666666666664 356666666666666666666666662
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCC
Q psy9209 243 DTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVP 322 (349)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 322 (349)
...+|...+.++...|++..|..+... +..+ ++....++..|...|.+++|+..+++++.++|.+
T Consensus 1249 -----------n~~aWkev~~acve~~Ef~LA~~cgl~-Iiv~---~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1249 -----------STRTWKEVCFACVDGKEFRLAQMCGLH-IVVH---ADELEELINYYQDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred -----------CHHHHHHHHHHHhhhhHHHHHHHHHHh-hhcC---HHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH
Confidence 244555555555555555555554442 2222 2233355555666666666666666666666555
Q ss_pred CCcc
Q psy9209 323 PSTR 326 (349)
Q Consensus 323 ~~~~ 326 (349)
...+
T Consensus 1314 ~gmf 1317 (1630)
T 1xi4_A 1314 MGMF 1317 (1630)
T ss_pred hHHH
Confidence 4433
No 103
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.86 E-value=4.2e-20 Score=151.36 Aligned_cols=202 Identities=12% Similarity=-0.008 Sum_probs=156.8
Q ss_pred hhCcHHHHHHHHHHHHHhccccCC--CCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhch---HHHHHHHHHH
Q psy9209 8 KLNETEAAADLFMEFVSKLDTFAA--PPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA---EEAKSLLRSI 82 (349)
Q Consensus 8 ~~g~~~~A~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~---~~~~~~l~~~ 82 (349)
..|++++|..+++++.+..+...- .++.......+...|.++...|++++|+..|.+++.+.+.. ......+..+
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l 82 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQA 82 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 568899999999999876654211 34444444567778888999999999999999998876532 3334456667
Q ss_pred HHhcCCCcchHHHHHHHHHHHhhCcc------cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HHHHHHH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKLNPN------YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YRAWYGL 150 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l 150 (349)
+.++...|++++|+.+|++++++.+. ...++..+|.+|.. |++++|+.+|++++++.|.. ..++.++
T Consensus 83 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~l 161 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKA 161 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH
Confidence 77777788999999999998887432 24577888999888 99999999999998876643 5678888
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCCCh------HHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc
Q psy9209 151 GQTYEILRLPYYGLYYYKQAHMVRPNDP------RMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD 211 (349)
Q Consensus 151 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 211 (349)
|.++..+|++++|+.+|++++.+.|.+. .++..+|.++...|++++|+.+|++++ .+|..
T Consensus 162 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 162 SRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 9999999999999999999988765432 467788888888899999999999998 87754
No 104
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.86 E-value=1.3e-20 Score=167.68 Aligned_cols=155 Identities=15% Similarity=0.183 Sum_probs=98.7
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQ 169 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 169 (349)
|++++|+..++++++.+|++..++..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+.++++
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 82 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQ 82 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 56667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc---CcHHHHHHHHHHHHhcccc
Q psy9209 170 AHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL---NETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 170 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~---~~~~~A~~~~~~~~~~~~~ 244 (349)
+++.+|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++... |++++|...+++++...|.
T Consensus 83 al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 83 ASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCc
Confidence 77777777777777777777777777777777777777777777777777777777 7777777777777776665
No 105
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.85 E-value=2e-20 Score=166.57 Aligned_cols=165 Identities=16% Similarity=0.154 Sum_probs=140.8
Q ss_pred cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHH
Q psy9209 123 MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYN 202 (349)
Q Consensus 123 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 202 (349)
.|++++|+..|+++++.+|.+..++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+.+++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHh---CCHHHHHHHHH
Q psy9209 203 KSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA---NNLDTAYKCAQ 279 (349)
Q Consensus 203 ~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g~~~~A~~~~~ 279 (349)
++++.+|+++.++..+|.++...|++++|+..|+++++..|+ ...++..+|.++... |++++|...++
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~~~~~g~~~~A~~~~~ 152 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE---------EPYITAQLLNWRRRLCDWRALDVLSAQVR 152 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 789999999999999 99999999999
Q ss_pred HHHcccCChHHHHHHHH
Q psy9209 280 KCLQHEETAEEAKSLLR 296 (349)
Q Consensus 280 ~a~~~~~~~~~~~~~l~ 296 (349)
++++.+|.....+..++
T Consensus 153 ~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 153 AAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHTCCCSCHHHHTT
T ss_pred HHHhcCCcccChHHHhC
Confidence 99999998776666555
No 106
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.85 E-value=4.7e-21 Score=150.70 Aligned_cols=190 Identities=10% Similarity=0.007 Sum_probs=86.6
Q ss_pred CcchHHHHHHHHHHHhhCcccHHHHHHH-------HHHHHhcCChHHHHHHHHHHHHhCcccHHHHH-------------
Q psy9209 89 DESSSQAVLYFQRALKLNPNYLGVWTLL-------GHEYMEMKNTNAAIQCYRQAIEINNLDYRAWY------------- 148 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l-------a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------------- 148 (349)
.+++..|.+.|.+++..+|...++|..+ +.++...++..+++..+.+.+.+.|.....++
T Consensus 19 ~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v 98 (282)
T 4f3v_A 19 PMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPV 98 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEEC
T ss_pred CCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCccccccccc
Confidence 3455555555555555555555555555 45555555555555555555555444322222
Q ss_pred --------HHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc-ccc-HHHHHHH
Q psy9209 149 --------GLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIG-DAD-GKALFKL 218 (349)
Q Consensus 149 --------~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~-~~~~~~l 218 (349)
.++.++...|++++|.+.|..++...|++. ..+.+|.++.+.+++++|+..|+++.... |.. ..+++.+
T Consensus 99 ~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~L 177 (282)
T 4f3v_A 99 TSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAH 177 (282)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHH
Confidence 234444444444444444444444444444 44444444444444444444444443331 111 2244444
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcc--cccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 219 AKLYDKLNETEAAADLFMEFVSKL--DTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 219 ~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
|.++..+|++++|+..|++++... |. ....+++.+|.++..+|+.++|...|++++..+|+
T Consensus 178 G~al~~LG~~~eAl~~l~~a~~g~~~P~--------~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 178 GVAAANLALFTEAERRLTEANDSPAGEA--------CARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSTTTTT--------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHCCCHHHHHHHHHHHhcCCCCcc--------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 444444444444444444444211 11 02334444444444444444444444444444444
No 107
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.85 E-value=7.5e-21 Score=137.66 Aligned_cols=118 Identities=11% Similarity=0.075 Sum_probs=106.6
Q ss_pred HHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q psy9209 95 AVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR 174 (349)
Q Consensus 95 A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 174 (349)
+-..+++++.++|+++.+++.+|.++...|++++|+..|++++.++|.++.+|.++|.++...|++++|+..|++++.++
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 33456777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccH
Q psy9209 175 PNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADG 212 (349)
Q Consensus 175 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 212 (349)
|+++.+++++|.++..+|++++|+..|++++++.|+.+
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999988654
No 108
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.84 E-value=3e-20 Score=146.19 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=180.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHH-------HHHHHHhCCHHHHHHHHHHHHhcCCCCh-------
Q psy9209 113 WTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGL-------GQTYEILRLPYYGLYYYKQAHMVRPNDP------- 178 (349)
Q Consensus 113 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l-------~~~~~~~~~~~~A~~~~~~~~~~~~~~~------- 178 (349)
++..|.-+ ..+++..|...|.++++++|...++|.++ +.++...++..+++..+.+.+.+.|...
T Consensus 10 ~~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~ 88 (282)
T 4f3v_A 10 LFESAVSM-LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIG 88 (282)
T ss_dssp HHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECC
T ss_pred HHHHHhcc-cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccC
Confidence 34445555 58999999999999999999999999999 8999999999999999999999877643
Q ss_pred --------------HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 179 --------------RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 179 --------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
.+...++.++...|++++|.+.|..++...|.+. ..+.+|.++.+.+++++|+..|+++....+.
T Consensus 89 g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~ 167 (282)
T 4f3v_A 89 GLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK 167 (282)
T ss_dssp TTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH
T ss_pred CcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc
Confidence 3445588999999999999999999999999888 9999999999999999999999988775422
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHccc--CC-hHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCC
Q psy9209 245 FAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE--ET-AEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPV 321 (349)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~--~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 321 (349)
. ....+++.+|.++..+|++++|+.+|++++... |. ..+++..+|.++..+|+.++|...|++++..+|+
T Consensus 168 ~-------~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 168 F-------LAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp H-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred c-------cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 0 025689999999999999999999999998654 55 7789999999999999999999999999999999
Q ss_pred CCCccccC
Q psy9209 322 PPSTRSSK 329 (349)
Q Consensus 322 ~~~~~~~~ 329 (349)
..+...+
T Consensus 241 -~~~~~aL 247 (282)
T 4f3v_A 241 -PKVAAAL 247 (282)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 6554443
No 109
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.84 E-value=4.4e-21 Score=138.89 Aligned_cols=116 Identities=11% Similarity=0.117 Sum_probs=111.7
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc
Q psy9209 129 AIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIG 208 (349)
Q Consensus 129 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 208 (349)
+-..++++++++|+++.+++.+|.++...|++++|+..|++++.++|+++.+|..+|.++...|++++|+.+|++++.++
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 34557778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 209 DADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
|+++.+++++|.++..+|++++|+..|++++.+.|+
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999987
No 110
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.84 E-value=5.3e-22 Score=164.80 Aligned_cols=270 Identities=12% Similarity=0.019 Sum_probs=129.6
Q ss_pred hHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q psy9209 5 LYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQ 84 (349)
Q Consensus 5 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~ 84 (349)
+..+.|+.++|.+.+++.- .| .+|..+|.++...|++++|++.|.++ +++..+ ..++.
T Consensus 12 ll~~~~~ld~A~~fae~~~--------~~------~vWs~La~A~l~~g~~~eAIdsfika-----~D~~~y---~~V~~ 69 (449)
T 1b89_A 12 LIEHIGNLDRAYEFAERCN--------EP------AVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSY---MEVVQ 69 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHccCHHHHHHHHHhCC--------Ch------HHHHHHHHHHHHcCCHHHHHHHHHcC-----CCHHHH---HHHHH
Confidence 3456788888988886641 12 47999999999999999999999874 233343 33444
Q ss_pred hcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHH
Q psy9209 85 KRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGL 164 (349)
Q Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 164 (349)
.+...|++++|+.+++.+.+..++ +.+...++.+|.+.|++.++.++++. | +..+|..+|..+...|+|++|.
T Consensus 70 ~ae~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y~Klg~l~e~e~f~~~-----p-n~~a~~~IGd~~~~~g~yeeA~ 142 (449)
T 1b89_A 70 AANTSGNWEELVKYLQMARKKARE-SYVETELIFALAKTNRLAELEEFING-----P-NNAHIQQVGDRCYDEKMYDAAK 142 (449)
T ss_dssp ----------------------------------------CHHHHTTTTTC-----C-----------------CTTTHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCcc-chhHHHHHHHHHHhCCHHHHHHHHcC-----C-cHHHHHHHHHHHHHcCCHHHHH
Confidence 555679999999999999886444 77788999999999999999988853 4 4469999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 165 YYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
.+|.++ ..|..+|.++.++|++++|++.++++ .++.+|...+.++...|+++.|..+... +...|
T Consensus 143 ~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~a- 207 (449)
T 1b89_A 143 LLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHA- 207 (449)
T ss_dssp HHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCH-
T ss_pred HHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCH-
Confidence 999977 47889999999999999999999999 3789999999999999999999776664 22333
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH--cCCCCCchhHHHHhhhcCC--
Q psy9209 245 FAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK--RQPDESSSQPMECAVVLDP-- 320 (349)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~--~~~~~~A~~~~~~a~~~~p-- 320 (349)
+-...++.+|.+.|++++|+.++++++.+++....++..++.++.+ .++..+.++.|...+.+.|
T Consensus 208 -----------d~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~ 276 (449)
T 1b89_A 208 -----------DELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVL 276 (449)
T ss_dssp -----------HHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHH
T ss_pred -----------hhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHH
Confidence 3355688999999999999999999999999999999999888874 3455566777777777766
Q ss_pred ---CCCCccccC
Q psy9209 321 ---VPPSTRSSK 329 (349)
Q Consensus 321 ---~~~~~~~~~ 329 (349)
++...|..+
T Consensus 277 ~~~~~~~~w~e~ 288 (449)
T 1b89_A 277 RAAEQAHLWAEL 288 (449)
T ss_dssp HHHHTTTCHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666555543
No 111
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.84 E-value=3.2e-19 Score=137.83 Aligned_cols=187 Identities=12% Similarity=-0.002 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC----CHHHHHHHHH
Q psy9209 93 SQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR----LPYYGLYYYK 168 (349)
Q Consensus 93 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~----~~~~A~~~~~ 168 (349)
.+|+.+|+++.+. .++.+++.+|.+|...+++++|+.+|+++++. .++.+++.+|.+|.. + ++++|+.+|+
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 3577888888875 67899999999999999999999999999875 578899999999998 7 8999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHH----hhCHHHHHHHHHHHHcccc--ccHHHHHHHHHHHHh----cCcHHHHHHHHHHH
Q psy9209 169 QAHMVRPNDPRMLTALGEAFEK----QEKISEAMKCYNKSRAIGD--ADGKALFKLAKLYDK----LNETEAAADLFMEF 238 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~ 238 (349)
++.+ +.++.+++.+|.+|.. .+++++|+.+|+++.+..| .++.+++.+|.+|.. .+++++|+.+|+++
T Consensus 78 ~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A 155 (212)
T 3rjv_A 78 KAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGS 155 (212)
T ss_dssp HHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHH
T ss_pred HHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 9965 5788999999999987 8899999999999999988 458999999999998 88999999999999
Q ss_pred HhcccccCCCCCCcchHHHHHHHHHHHHHh-C-----CHHHHHHHHHHHHcccCChHHHHHHHHHH
Q psy9209 239 VSKLDTFAAPPDKTCGFFAFKYLANHHLKA-N-----NLDTAYKCAQKCLQHEETAEEAKSLLRSI 298 (349)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g-----~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 298 (349)
+.. +. .+.+++.||.+|... | ++++|+.+|+++.+.. ++.+...++.+
T Consensus 156 ~~~-~~---------~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g--~~~A~~~l~~l 209 (212)
T 3rjv_A 156 SSL-SR---------TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG--FDTGCEEFDRI 209 (212)
T ss_dssp HHT-SC---------TTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT--CHHHHHHHHHH
T ss_pred HHc-CC---------CHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHh
Confidence 987 44 467899999999864 3 8999999999999874 34445555443
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.84 E-value=4.2e-22 Score=165.03 Aligned_cols=152 Identities=16% Similarity=0.039 Sum_probs=97.1
Q ss_pred cCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC---------------hHHHHHHHHH
Q psy9209 123 MKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND---------------PRMLTALGEA 187 (349)
Q Consensus 123 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~ 187 (349)
++++++|+..++++++..|....++..+|.++...|++++|+..|++++.+.|.+ ..++.++|.+
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555556566666666666666666666666666666666655 3666666666
Q ss_pred HHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH
Q psy9209 188 FEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK 267 (349)
Q Consensus 188 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 267 (349)
+..+|++++|+.+|+++++++|.++.+++.+|.++..+|++++|+..|++++.+.|. ...++..++.++..
T Consensus 206 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---------~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 206 HLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN---------NKAAKTQLAVCQQR 276 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---------CHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHH
Confidence 666666666666666666666666666666666666666666666666666666666 56666666666666
Q ss_pred hCCHHHH-HHHHHHHHc
Q psy9209 268 ANNLDTA-YKCAQKCLQ 283 (349)
Q Consensus 268 ~g~~~~A-~~~~~~a~~ 283 (349)
.|++++| ...|++++.
T Consensus 277 ~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 277 IRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 6666666 344555443
No 113
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.84 E-value=6.2e-22 Score=164.01 Aligned_cols=187 Identities=14% Similarity=0.099 Sum_probs=164.2
Q ss_pred HhcCCHHHHHHHHHH----HhhhhhchHHHHHHHHHHHHhc------------CCCcchHHHHHHHHHHHhhCcccHHHH
Q psy9209 50 LKANNLDTAYKCAQK----CLQHEETAEEAKSLLRSIAQKR------------QPDESSSQAVLYFQRALKLNPNYLGVW 113 (349)
Q Consensus 50 ~~~~~~~~A~~~~~~----~l~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~A~~~~~~~~~~~~~~~~~~ 113 (349)
...+.+++|+..++. ++.+.|+. + ++..+... ...+++++|+..+++++...|..+.++
T Consensus 76 ~~~~~~e~al~~~~~Ge~~~l~i~p~~--a---yg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~ 150 (336)
T 1p5q_A 76 DLPYGLERAIQRMEKGEHSIVYLKPSY--A---FGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIV 150 (336)
T ss_dssp TCCHHHHHHHTTCCTTCEEEEEECTTT--T---TTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHH
T ss_pred ccchHHHHHHhcCCCCCeEEEEECCcc--c---cCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHH
Confidence 334568888888888 77887775 2 22222211 134678889999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Q psy9209 114 TLLGHEYMEMKNTNAAIQCYRQAIEINNLD---------------YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP 178 (349)
Q Consensus 114 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (349)
..+|.++...|++++|+..|++++++.|.+ ..++.++|.++...|++++|+.+|+++++++|+++
T Consensus 151 ~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 230 (336)
T 1p5q_A 151 KERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNE 230 (336)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 999999999999999999999999999998 68999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHH-HHHHHHHHhc
Q psy9209 179 RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAA-ADLFMEFVSK 241 (349)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A-~~~~~~~~~~ 241 (349)
.+++.+|.++..+|++++|+..|+++++++|.+..++..++.++..+|++++| ...|++++..
T Consensus 231 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 231 KGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 5577777654
No 114
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.84 E-value=9.4e-19 Score=161.69 Aligned_cols=240 Identities=12% Similarity=0.040 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
.+|+.+|.++...|++++|+..|.++ +++.. +..++.++.+.|++++|+++|..+.+..++ +.+...+|.+
T Consensus 1106 ~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~sa---y~eVa~~~~~lGkyEEAIeyL~mArk~~~e-~~Idt~Lafa 1176 (1630)
T 1xi4_A 1106 AVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSS---YMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFA 1176 (1630)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHH---HHHHHHHHHHcCCHHHHHHHHHHHHhhccc-ccccHHHHHH
Confidence 68999999999999999999999886 44444 344566677789999999999999887744 2223346677
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMK 199 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 199 (349)
|.+.+++++ ++.|. ..+ +...+..+|..+...|++++|..+|.++ ..|..+|.++.++|++++|++
T Consensus 1177 YAKl~rlee-le~fI----~~~-n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIE 1242 (1630)
T 1xi4_A 1177 LAKTNRLAE-LEEFI----NGP-NNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVD 1242 (1630)
T ss_pred HHhhcCHHH-HHHHH----hCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHH
Confidence 777766663 33331 122 3344556777777777777777777664 356667777777777777777
Q ss_pred HHHHHHcccc-------------------------ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcch
Q psy9209 200 CYNKSRAIGD-------------------------ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCG 254 (349)
Q Consensus 200 ~~~~a~~~~~-------------------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 254 (349)
.++++....+ .+++.+..++..|...|.+++|+..+++++.+++. +
T Consensus 1243 aarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~Lera---------H 1313 (1630)
T 1xi4_A 1243 GARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERA---------H 1313 (1630)
T ss_pred HHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChh---------H
Confidence 7766633221 12344456666777777777777777777777766 6
Q ss_pred HHHHHHHHHHHHHh--CCHHHHHHHHHHHHcccC-----ChHHHHHHHHHHHHHcCCCCCchhH
Q psy9209 255 FFAFKYLANHHLKA--NNLDTAYKCAQKCLQHEE-----TAEEAKSLLRSIAQKRQPDESSSQP 311 (349)
Q Consensus 255 ~~~~~~l~~~~~~~--g~~~~A~~~~~~a~~~~~-----~~~~~~~~l~~~~~~~~~~~~A~~~ 311 (349)
...+..+|.++.+- ++..++++.|...+.+.| .....|..+..+|.+.|+++.|+..
T Consensus 1314 ~gmftELaiLyaKy~peklmEhlk~f~~rini~k~~r~~e~~~lW~elv~LY~~~~e~dnA~~t 1377 (1630)
T 1xi4_A 1314 MGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIIT 1377 (1630)
T ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccchHhHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 67776666666553 466677777777666665 5667777777777777777777643
No 115
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.83 E-value=3.7e-20 Score=149.50 Aligned_cols=200 Identities=12% Similarity=0.035 Sum_probs=160.9
Q ss_pred cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy9209 107 PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGE 186 (349)
Q Consensus 107 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 186 (349)
|..+..+..+|..+...|++++|+..|+++++.+|.++.++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 55678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHH
Q psy9209 187 AFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHL 266 (349)
Q Consensus 187 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 266 (349)
++...|++++|+..|+++++++|+++..+......... ..++...........+. ...+...++.++
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~i~~~l~~l~- 147 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR---IAKKKRWNSIEERRIHQ---------ESELHSYLTRLI- 147 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHH---HHHHHHHHHHHHTCCCC---------CCHHHHHHHHHH-
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHH---HHHHHHHHHHHHHHHhh---------hHHHHHHHHHHH-
Confidence 99999999999999999999988764322222222221 12222222233333444 456666666654
Q ss_pred HhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHc-CCCCCchhHHHHhhhcCC
Q psy9209 267 KANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKR-QPDESSSQPMECAVVLDP 320 (349)
Q Consensus 267 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p 320 (349)
.|++++|++.++++++.+|++......++.++... +.+++|...|.++.+..+
T Consensus 148 -~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~~~ 201 (281)
T 2c2l_A 148 -AAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRK 201 (281)
T ss_dssp -HHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred -HHHHHHHHHHHHhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 68999999999999999999988888888777766 667889999998876433
No 116
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.83 E-value=3.9e-21 Score=159.62 Aligned_cols=264 Identities=13% Similarity=0.042 Sum_probs=151.7
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRS 81 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~ 81 (349)
.|+.+.+.|++++|++.|.++ .++ ..+..++..+...|++++|+.+++.+.+..++ +.. ...
T Consensus 38 La~A~l~~g~~~eAIdsfika--------~D~------~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~-~~i---~~~ 99 (449)
T 1b89_A 38 LAKAQLQKGMVKEAIDSYIKA--------DDP------SSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYV---ETE 99 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcC--------CCH------HHHHHHHHHHHhCCCHHHHHHHHHHHHHhCcc-chh---HHH
Confidence 578889999999999999653 122 35888999999999999999999998875433 333 344
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPY 161 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (349)
++.+|.+.|++.++.++++. |+ ..+|..+|..+...|+|++|+.+|.++ ..|..+|.++.++|+++
T Consensus 100 Li~~Y~Klg~l~e~e~f~~~-----pn-~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq 165 (449)
T 1b89_A 100 LIFALAKTNRLAELEEFING-----PN-NAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQ 165 (449)
T ss_dssp ---------CHHHHTTTTTC-----C-----------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHH
T ss_pred HHHHHHHhCCHHHHHHHHcC-----Cc-HHHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHH
Confidence 55668888999998887752 43 469999999999999999999999977 46889999999999999
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q psy9209 162 YGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 162 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 241 (349)
+|++.+.++ +++.+|...+.++...|+++.|..+... +...|+. ...++.+|.+.|++++|+..+++++.+
T Consensus 166 ~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 166 AAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp HHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 999999999 4789999999999999999999887775 3355544 446888999999999999999999999
Q ss_pred ccccCCCCCCcchHHHHHHHHHHHHHh--CCHHHHHHHHHHHHcccC-----ChHHHHHHHHHHHHHcCCCCCchhHHHH
Q psy9209 242 LDTFAAPPDKTCGFFAFKYLANHHLKA--NNLDTAYKCAQKCLQHEE-----TAEEAKSLLRSIAQKRQPDESSSQPMEC 314 (349)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~a~~~~~-----~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 314 (349)
++. ....+..+|.+|.+- ++..+.++.|.+.+.+.| .....|..+..+|...++++.|+..+-.
T Consensus 237 e~a---------h~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~ 307 (449)
T 1b89_A 237 ERA---------HMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN 307 (449)
T ss_dssp TTC---------CHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHH---------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHh
Confidence 887 799999999888764 577788888887777877 7788899999999999999988776544
Q ss_pred h
Q psy9209 315 A 315 (349)
Q Consensus 315 a 315 (349)
.
T Consensus 308 h 308 (449)
T 1b89_A 308 H 308 (449)
T ss_dssp S
T ss_pred C
Confidence 3
No 117
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.83 E-value=3.8e-20 Score=134.30 Aligned_cols=120 Identities=12% Similarity=0.101 Sum_probs=105.4
Q ss_pred HHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q psy9209 96 VLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRP 175 (349)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 175 (349)
-..|++++.++|++..+++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+..|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34677888888988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHH
Q psy9209 176 NDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKAL 215 (349)
Q Consensus 176 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 215 (349)
+++.+++.+|.++...|++++|+..|++++++.|+++...
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 126 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFX 126 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGH
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcch
Confidence 9999999999999999999999999999998887765543
No 118
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.81 E-value=2.8e-19 Score=129.00 Aligned_cols=125 Identities=18% Similarity=0.183 Sum_probs=102.6
Q ss_pred HHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy9209 97 LYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN 176 (349)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (349)
..|++++..+|++...++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+..|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 45677788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHH
Q psy9209 177 DPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKL 221 (349)
Q Consensus 177 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 221 (349)
++.+++.+|.++...|++++|+.+|+++++.+|.++........+
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 888888888888888888888888888888888776554444433
No 119
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.81 E-value=1.2e-18 Score=134.65 Aligned_cols=179 Identities=14% Similarity=0.051 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhh----CHHHHHHHHH
Q psy9209 127 NAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQE----KISEAMKCYN 202 (349)
Q Consensus 127 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~A~~~~~ 202 (349)
.+|+..|+++.+. .++.+++.+|.+|...+++++|+.+|+++.+. .++.+++.+|.+|.. + ++++|+.+|+
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 4678899999875 68999999999999999999999999999875 689999999999998 7 8999999999
Q ss_pred HHHccccccHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH----hCCHHHH
Q psy9209 203 KSRAIGDADGKALFKLAKLYDK----LNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK----ANNLDTA 274 (349)
Q Consensus 203 ~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A 274 (349)
++.+ +.++.+++.+|.+|.. .+++++|+.+|+++....+. ...+.+++.||.+|.. .+++++|
T Consensus 78 ~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~-------~~~~~a~~~Lg~~y~~g~g~~~d~~~A 148 (212)
T 3rjv_A 78 KAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSES-------DAAVDAQMLLGLIYASGVHGPEDDVKA 148 (212)
T ss_dssp HHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS-------HHHHHHHHHHHHHHHHTSSSSCCHHHH
T ss_pred HHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC-------cchHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 9965 5689999999999998 89999999999999998762 0148999999999999 8899999
Q ss_pred HHHHHHHHcccCChHHHHHHHHHHHHHc-C-----CCCCchhHHHHhhhcCC
Q psy9209 275 YKCAQKCLQHEETAEEAKSLLRSIAQKR-Q-----PDESSSQPMECAVVLDP 320 (349)
Q Consensus 275 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~-----~~~~A~~~~~~a~~~~p 320 (349)
+.+|+++.+. |.++.+...+|.++... | ++++|+.+|+++.+...
T Consensus 149 ~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 149 SEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999998 66777899999999754 3 78999999999988754
No 120
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.80 E-value=8.6e-19 Score=127.12 Aligned_cols=116 Identities=12% Similarity=0.061 Sum_probs=112.2
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc
Q psy9209 129 AIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIG 208 (349)
Q Consensus 129 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 208 (349)
+...|++++.++|++..+++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+..|++++.++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 209 DADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
|+++.+++.+|.++...|++++|+..|++++...|.
T Consensus 86 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 999999999999999999999999999999999887
No 121
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1.3e-18 Score=153.02 Aligned_cols=202 Identities=10% Similarity=0.056 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCC----------hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC--C
Q psy9209 92 SSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKN----------TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR--L 159 (349)
Q Consensus 92 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~--~ 159 (349)
.++|+..+.+++..+|++..+|+..+.++...|+ +++++..++++++.+|++..+|...+.++...+ +
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~ 124 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN 124 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccccc
Confidence 3455666666666666666666666666666555 566666666666666666666666666666666 4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhh-CHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q psy9209 160 PYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQE-KISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEF 238 (349)
Q Consensus 160 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 238 (349)
+++++..++++++.+|.+..+|...+.++...| .++++++++.++++.+|.+..+|..++.++...+...++
T Consensus 125 ~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~------- 197 (567)
T 1dce_A 125 WARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDS------- 197 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCS-------
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccc-------
Confidence 466666666666666666666666666655555 555555555555555555555555555555443322000
Q ss_pred HhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCC-----------
Q psy9209 239 VSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDES----------- 307 (349)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~----------- 307 (349)
.. .. -...+.+++|++++.+++..+|++..+|..++.++...+.+++
T Consensus 198 ----~~---------~~---------~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~~~~~~~~~~~~~ 255 (567)
T 1dce_A 198 ----GP---------QG---------RLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDVLCCVHVSREEA 255 (567)
T ss_dssp ----SS---------CC---------SSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCSCEEEEEEETTTT
T ss_pred ----cc---------cc---------cccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCccceeeeeeccCCc
Confidence 00 00 0002468999999999999999999999999999999998877
Q ss_pred -chhHHHHhhhcCCCC
Q psy9209 308 -SSQPMECAVVLDPVP 322 (349)
Q Consensus 308 -A~~~~~~a~~~~p~~ 322 (349)
|+.+|.+++.++|..
T Consensus 256 ~~~~~f~~~i~~~~~~ 271 (567)
T 1dce_A 256 CLSVCFSRPLTVGSRM 271 (567)
T ss_dssp EEEEEEEEEECTTBTT
T ss_pred eEEEEeccceeccccc
Confidence 777899999988875
No 122
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.80 E-value=1.9e-17 Score=134.79 Aligned_cols=177 Identities=6% Similarity=-0.119 Sum_probs=148.7
Q ss_pred CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccH------HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC--
Q psy9209 106 NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDY------RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND-- 177 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-- 177 (349)
+|.....+...+..+...|++++|++.++++++..+... ..++.+|.++...|++++|+.++++++...+..
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 344556677888899999999999999999998766543 446678899999999999999999999875543
Q ss_pred ----hHHHHHHHHHHHHhhCHHHHHHHHHHHHcc---cccc----HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccC
Q psy9209 178 ----PRMLTALGEAFEKQEKISEAMKCYNKSRAI---GDAD----GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFA 246 (349)
Q Consensus 178 ----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 246 (349)
..++..+|.+|...|++++|+.+|+++++. .|++ ..++.++|.++..+|++++|+.++++++.+.+.
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~-- 228 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR-- 228 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--
Confidence 468899999999999999999999999944 4442 268999999999999999999999999998765
Q ss_pred CCCCCcchHHHHHHHHHHHHHhCCHHHH-HHHHHHHHccc
Q psy9209 247 APPDKTCGFFAFKYLANHHLKANNLDTA-YKCAQKCLQHE 285 (349)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~~~~a~~~~ 285 (349)
.........++..+|.++...|++++| ..++++++.+.
T Consensus 229 -~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 229 -INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp -TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred -cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 333444588999999999999999999 88899998763
No 123
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.80 E-value=6.9e-18 Score=120.39 Aligned_cols=134 Identities=25% Similarity=0.440 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK 190 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 190 (349)
.++..+|.++...|++++|+..++++++..|.+..++..+|.++...|++++|+.++++++...|.++.++..+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 46778899999999999999999999998888888899999999999999999999999999999888899999999999
Q ss_pred hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 191 QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 191 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
.|++++|+..+++++...|.++.++..+|.++...|++++|...+++++...|.
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 999999999999999998888889999999999999999999999999887764
No 124
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.79 E-value=1.3e-17 Score=118.95 Aligned_cols=134 Identities=25% Similarity=0.360 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHh
Q psy9209 145 RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDK 224 (349)
Q Consensus 145 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 224 (349)
.++..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+.++++++...|.++.++..+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 35677888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 225 LNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 225 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
.|++++|+..+++++...|. ...++..+|.++...|++++|..++++++..+|+
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~---------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPR---------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred hcCHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 88888888888888888776 5778888888888888888888888888877764
No 125
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.79 E-value=6.9e-19 Score=142.04 Aligned_cols=188 Identities=13% Similarity=0.043 Sum_probs=118.8
Q ss_pred HHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYY 162 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (349)
+..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++++|++..+++.+|.++...|++++
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 90 (281)
T 2c2l_A 11 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDE 90 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 34444456777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q psy9209 163 GLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKL 242 (349)
Q Consensus 163 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 242 (349)
|+..|+++++++|+++..+........ +..++..+........|.++.+...++.+. .|++++|++.++++++..
T Consensus 91 A~~~~~~al~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~--~~~~~~A~~~~~~al~~~ 165 (281)
T 2c2l_A 91 AIANLQRAYSLAKEQRLNFGDDIPSAL---RIAKKKRWNSIEERRIHQESELHSYLTRLI--AAERERELEECQRNHEGH 165 (281)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSHHHHHH---HHHHHHHHHHHHHTCCCCCCHHHHHHHHHH--HHHHHHHHTTTSGGGTTT
T ss_pred HHHHHHHHHHhCccchhhHHHHHHHHH---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHH--HHHHHHHHHHHHhhhccc
Confidence 777777777776655322211111111 112222222233344555666666665544 577777777777777777
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHh-CCHHHHHHHHHHHHcc
Q psy9209 243 DTFAAPPDKTCGFFAFKYLANHHLKA-NNLDTAYKCAQKCLQH 284 (349)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~a~~~ 284 (349)
|. .......++.++... +.+++|...|.++.+.
T Consensus 166 p~---------~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~ 199 (281)
T 2c2l_A 166 ED---------DGHIRAQQACIEAKHDKYMADMDELFSQVDEK 199 (281)
T ss_dssp SC---------HHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCT
T ss_pred cc---------hhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 76 556666666666655 5677777777777653
No 126
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.78 E-value=1.7e-18 Score=124.91 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=108.2
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccc
Q psy9209 131 QCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDA 210 (349)
Q Consensus 131 ~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 210 (349)
..|++++..+|++...++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+.+|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 211 DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
++.+++.+|.++...|++++|+..|++++...|.
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999987
No 127
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.1e-18 Score=153.63 Aligned_cols=210 Identities=12% Similarity=0.079 Sum_probs=177.4
Q ss_pred HHHHHhcCCH-HHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcc----------hHHHHHHHHHHHhhCcccHHHHH
Q psy9209 46 ANHHLKANNL-DTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDES----------SSQAVLYFQRALKLNPNYLGVWT 114 (349)
Q Consensus 46 ~~~~~~~~~~-~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------~~~A~~~~~~~~~~~~~~~~~~~ 114 (349)
.......|++ ++|+..+.+++..+|++..+|...+.+.... |+ +++++..++++++.+|++..+|.
T Consensus 35 ~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l---~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~ 111 (567)
T 1dce_A 35 VFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHL---ETEKSPEESAALVKAELGFLESCLRVNPKSYGTWH 111 (567)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH---HTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhc---ccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3344455654 6789999999999999999998887776654 55 99999999999999999999999
Q ss_pred HHHHHHHhcC--ChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC-CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh
Q psy9209 115 LLGHEYMEMK--NTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR-LPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQ 191 (349)
Q Consensus 115 ~la~~~~~~~--~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 191 (349)
..+.++...| ++++++..+.++++.+|.+..+|...+.+....| .+++++++++++++.+|.+..+|...+.++...
T Consensus 112 hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 112 HRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 9999999999 6799999999999999999999999999999999 999999999999999999999999999999876
Q ss_pred hCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCH
Q psy9209 192 EKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNL 271 (349)
Q Consensus 192 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 271 (349)
+...++ .+.. -...+.++++++++.+++..+|. +..+|+.++.++...+++
T Consensus 192 ~~~~~~----------~~~~----------~~~~~~~~eel~~~~~ai~~~P~---------~~saW~y~~~ll~~~~~~ 242 (567)
T 1dce_A 192 HPQPDS----------GPQG----------RLPENVLLKELELVQNAFFTDPN---------DQSAWFYHRWLLGRAEPH 242 (567)
T ss_dssp SCCCCS----------SSCC----------SSCHHHHHHHHHHHHHHHHHCSS---------CSHHHHHHHHHHSCCCCC
T ss_pred cccccc----------cccc----------cccHHHHHHHHHHHHHHHhhCCC---------CccHHHHHHHHHhcCCCc
Confidence 543111 0000 01135689999999999999999 799999999999999886
Q ss_pred HH------------HHHHHHHHHcccCC
Q psy9209 272 DT------------AYKCAQKCLQHEET 287 (349)
Q Consensus 272 ~~------------A~~~~~~a~~~~~~ 287 (349)
++ |+..|.+++.++|.
T Consensus 243 ~~~~~~~~~~~~~~~~~~f~~~i~~~~~ 270 (567)
T 1dce_A 243 DVLCCVHVSREEACLSVCFSRPLTVGSR 270 (567)
T ss_dssp SCEEEEEEETTTTEEEEEEEEEECTTBT
T ss_pred cceeeeeeccCCceEEEEeccceecccc
Confidence 66 55567777776664
No 128
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.1e-17 Score=117.96 Aligned_cols=118 Identities=15% Similarity=0.068 Sum_probs=105.2
Q ss_pred cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy9209 107 PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGE 186 (349)
Q Consensus 107 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 186 (349)
|..+..+..+|..+...|++++|+..|+++++.+|.++.++..+|.++...|++++|+..++++++++|+++.++..+|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHccc------cccHHHHHHHHHHHHh
Q psy9209 187 AFEKQEKISEAMKCYNKSRAIG------DADGKALFKLAKLYDK 224 (349)
Q Consensus 187 ~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~ 224 (349)
++...|++++|+..|+++++++ |.+..++..++.+...
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999999999999999998 8888888887776544
No 129
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.78 E-value=3.1e-17 Score=133.46 Aligned_cols=169 Identities=7% Similarity=-0.105 Sum_probs=142.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCcccHH------HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh------HH
Q psy9209 113 WTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYR------AWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP------RM 180 (349)
Q Consensus 113 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~------~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~ 180 (349)
+...+..+...|++++|+..++++++..+..+. .+..+|.++...|++++|+.++++++...+... .+
T Consensus 78 l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~ 157 (293)
T 3u3w_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYI 157 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHH
Confidence 345577888999999999999999987665443 344588888889999999999999998654432 37
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHcc-------ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcc
Q psy9209 181 LTALGEAFEKQEKISEAMKCYNKSRAI-------GDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTC 253 (349)
Q Consensus 181 ~~~l~~~~~~~~~~~~A~~~~~~a~~~-------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 253 (349)
+..+|.+|...|++++|+.+|+++++. .+....+++++|.++..+|++++|+.++++++.+.+. ......
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~---~~~~~~ 234 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR---INSMAL 234 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTBCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---cCcHHH
Confidence 899999999999999999999999943 3445668999999999999999999999999998876 334444
Q ss_pred hHHHHHHHHHHHHHhCC-HHHHHHHHHHHHcc
Q psy9209 254 GFFAFKYLANHHLKANN-LDTAYKCAQKCLQH 284 (349)
Q Consensus 254 ~~~~~~~l~~~~~~~g~-~~~A~~~~~~a~~~ 284 (349)
.+.++..+|.++..+|+ +++|+.++++++.+
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 68999999999999994 79999999999875
No 130
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.78 E-value=3.1e-16 Score=125.04 Aligned_cols=250 Identities=12% Similarity=0.009 Sum_probs=175.2
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCC
Q psy9209 46 ANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKN 125 (349)
Q Consensus 46 ~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 125 (349)
.+-.+-.|+|..++....+. .|.+..... .-..+++...|++... .. .+....+...++..+ . +.
T Consensus 20 ikn~fy~G~yq~~i~e~~~~---~~~~~~~~~--~~~~Rs~iAlg~~~~~-------~~-~~~~~~a~~~la~~~-~-~~ 84 (310)
T 3mv2_B 20 IKQNYYTGNFVQCLQEIEKF---SKVTDNTLL--FYKAKTLLALGQYQSQ-------DP-TSKLGKVLDLYVQFL-D-TK 84 (310)
T ss_dssp HHHHHTTTCHHHHTHHHHTS---SCCCCHHHH--HHHHHHHHHTTCCCCC-------CS-SSTTHHHHHHHHHHH-T-TT
T ss_pred HHHHHHhhHHHHHHHHHHhc---CccchHHHH--HHHHHHHHHcCCCccC-------CC-CCHHHHHHHHHHHHh-c-cc
Confidence 34566789999988854433 333322211 1112222223444421 11 111222444444443 2 22
Q ss_pred hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC--CChHHHHHHHHHHHHhhCHHHHHHHHHH
Q psy9209 126 TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRP--NDPRMLTALGEAFEKQEKISEAMKCYNK 203 (349)
Q Consensus 126 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 203 (349)
|+..+++.++..+....++..+|.++...|++++|+.++.+.+..+| .+.+++...+.++..+|+.+.|.+.+++
T Consensus 85 ---a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~ 161 (310)
T 3mv2_B 85 ---NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDN 161 (310)
T ss_dssp ---CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ---HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 78888888877655666678999999999999999999999988886 7788999999999999999999999999
Q ss_pred HHccccc----cHHHHHHH--HHHHHhcC--cHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHH
Q psy9209 204 SRAIGDA----DGKALFKL--AKLYDKLN--ETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAY 275 (349)
Q Consensus 204 a~~~~~~----~~~~~~~l--~~~~~~~~--~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 275 (349)
+.+.+|+ +..+...+ +.+....| ++.+|...|+++....|+ .......+. ++..+|++++|.
T Consensus 162 ~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~---------~~~~~lLln-~~~~~g~~~eAe 231 (310)
T 3mv2_B 162 YTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT---------WKTQLGLLN-LHLQQRNIAEAQ 231 (310)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS---------HHHHHHHHH-HHHHHTCHHHHH
T ss_pred HHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC---------cccHHHHHH-HHHHcCCHHHHH
Confidence 9888883 23333444 44455556 899999999998877664 222222233 899999999999
Q ss_pred HHHHHHHcc----------cCChHHHHHHHHHHHHHcCCCCCchhHHHHhhhcCCCCCCc
Q psy9209 276 KCAQKCLQH----------EETAEEAKSLLRSIAQKRQPDESSSQPMECAVVLDPVPPST 325 (349)
Q Consensus 276 ~~~~~a~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 325 (349)
..++.+++. +|+++++..++..+...+|+ +|.++++++.+.+|+++-+
T Consensus 232 ~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i 289 (310)
T 3mv2_B 232 GIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFI 289 (310)
T ss_dssp HHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHH
Confidence 999987776 48899999888888888886 8899999999999998754
No 131
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.77 E-value=5.6e-18 Score=127.16 Aligned_cols=130 Identities=16% Similarity=0.225 Sum_probs=112.6
Q ss_pred cCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHH-HHHhCCH--HH
Q psy9209 86 RQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQT-YEILRLP--YY 162 (349)
Q Consensus 86 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~-~~~~~~~--~~ 162 (349)
+...|++++|+..+++++..+|.++.++..+|.++...|++++|+..|+++++.+|.++.++..+|.+ +...|++ ++
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~ 99 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQ 99 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHH
Confidence 44568889999999999999999999999999999999999999999999999999999999999999 7788998 99
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHH
Q psy9209 163 GLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKAL 215 (349)
Q Consensus 163 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 215 (349)
|+..+++++..+|+++.++..+|.++...|++++|+..|++++..+|.+....
T Consensus 100 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 100 TRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 99999999999999999999999999999999999999999999988765443
No 132
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.77 E-value=7.6e-17 Score=131.17 Aligned_cols=177 Identities=8% Similarity=-0.073 Sum_probs=147.4
Q ss_pred CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh------HHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc--
Q psy9209 140 NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP------RMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD-- 211 (349)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-- 211 (349)
+|.....+...+..+...|++++|+..+.++++..+... ..+..+|.++...|++++|+.++++++...+..
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 345566677888999999999999999999999887654 345678889999999999999999999864432
Q ss_pred ----HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcc-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccC
Q psy9209 212 ----GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTC-GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE 286 (349)
Q Consensus 212 ----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 286 (349)
..++..+|.+|...|++++|+.+|++++..... ....+. ...++.++|.+|..+|++++|+.++++++++.+
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~---~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA---LHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999965433 111111 237999999999999999999999999998754
Q ss_pred C------hHHHHHHHHHHHHHcCCCCCc-hhHHHHhhhcC
Q psy9209 287 T------AEEAKSLLRSIAQKRQPDESS-SQPMECAVVLD 319 (349)
Q Consensus 287 ~------~~~~~~~l~~~~~~~~~~~~A-~~~~~~a~~~~ 319 (349)
. ...++..+|.++..+|++++| ..++++++.+.
T Consensus 228 ~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 228 RINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 3 378899999999999999999 88899988654
No 133
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.77 E-value=1.7e-18 Score=132.53 Aligned_cols=127 Identities=16% Similarity=0.033 Sum_probs=51.2
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh----------------HHH
Q psy9209 118 HEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP----------------RML 181 (349)
Q Consensus 118 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----------------~~~ 181 (349)
......|++++|.+.+.......+.....+..+|..+...|++++|+..|++++...|.++ .++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 12 SGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCN 91 (198)
T ss_dssp ----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence 3333444444444444433333333444444444444444444444444444444444443 334
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 182 TALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 182 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
..+|.++...|++++|+.++++++..+|.++.+++.+|.++..+|++++|+..|++++.+.|.
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 444444444444444444444444444444444444444444444444444444444444443
No 134
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.77 E-value=1.1e-16 Score=127.63 Aligned_cols=256 Identities=9% Similarity=-0.046 Sum_probs=190.8
Q ss_pred hHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q psy9209 5 LYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQ 84 (349)
Q Consensus 5 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~ 84 (349)
-.+-.|+|..++... ..+.+ .... .....+.++++..|++... ..-.|. ..+ +..++.
T Consensus 22 n~fy~G~yq~~i~e~----~~~~~-----~~~~--~~~~~~~Rs~iAlg~~~~~-------~~~~~~-~~a---~~~la~ 79 (310)
T 3mv2_B 22 QNYYTGNFVQCLQEI----EKFSK-----VTDN--TLLFYKAKTLLALGQYQSQ-------DPTSKL-GKV---LDLYVQ 79 (310)
T ss_dssp HHHTTTCHHHHTHHH----HTSSC-----CCCH--HHHHHHHHHHHHTTCCCCC-------CSSSTT-HHH---HHHHHH
T ss_pred HHHHhhHHHHHHHHH----HhcCc-----cchH--HHHHHHHHHHHHcCCCccC-------CCCCHH-HHH---HHHHHH
Confidence 345689999998733 23222 1111 3556677888888887742 122221 122 233333
Q ss_pred hcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCc--ccHHHHHHHHHHHHHhCCHHH
Q psy9209 85 KRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINN--LDYRAWYGLGQTYEILRLPYY 162 (349)
Q Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~~~~~~~~~~~ 162 (349)
.+. ++ |+..+++.+...+....++..+|.++...|++++|+..+.+.+..+| .+.+++..++.++..+|+.+.
T Consensus 80 ~~~--~~---a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~ 154 (310)
T 3mv2_B 80 FLD--TK---NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVST 154 (310)
T ss_dssp HHT--TT---CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHH
T ss_pred Hhc--cc---HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHH
Confidence 332 22 88999998887666677778999999999999999999999999886 889999999999999999999
Q ss_pred HHHHHHHHHhcCCC----ChHHHHHH--HHHHHHhh--CHHHHHHHHHHHHccccc--cHHHHHHHHHHHHhcCcHHHHH
Q psy9209 163 GLYYYKQAHMVRPN----DPRMLTAL--GEAFEKQE--KISEAMKCYNKSRAIGDA--DGKALFKLAKLYDKLNETEAAA 232 (349)
Q Consensus 163 A~~~~~~~~~~~~~----~~~~~~~l--~~~~~~~~--~~~~A~~~~~~a~~~~~~--~~~~~~~l~~~~~~~~~~~~A~ 232 (349)
|.+.++++.+.+|+ +-.+...+ +.+....| ++.+|...|+++....|+ .+..+++ ++..+|++++|.
T Consensus 155 A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe 231 (310)
T 3mv2_B 155 ASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQ 231 (310)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHH
T ss_pred HHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHH
Confidence 99999999999883 22333444 55566667 999999999999988886 3334444 899999999999
Q ss_pred HHHHHHHhcccccCCCCC----CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHH
Q psy9209 233 DLFMEFVSKLDTFAAPPD----KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLL 295 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l 295 (349)
..++.+++..|. ... .+.++.++.+++.+....|+ +|.++++++.+..|+++.+....
T Consensus 232 ~~L~~l~~~~p~---~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~ 293 (310)
T 3mv2_B 232 GIVELLLSDYYS---VEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQ 293 (310)
T ss_dssp HHHHHHHSHHHH---TTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHhccc---ccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHH
Confidence 999988877532 100 12389999999999999998 89999999999999998765443
No 135
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.76 E-value=6.6e-17 Score=125.11 Aligned_cols=143 Identities=14% Similarity=0.065 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHh
Q psy9209 145 RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDK 224 (349)
Q Consensus 145 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 224 (349)
..++.+|.++...|++++|+..|++++ .| ++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++..
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 345666777777777777777777664 22 566777777777777777777777777777777777777777777777
Q ss_pred cCcHHHHHHHHHHHHhcccccC-------CCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHH
Q psy9209 225 LNETEAAADLFMEFVSKLDTFA-------APPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEE 290 (349)
Q Consensus 225 ~~~~~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 290 (349)
.|++++|+..|++++...|... .....+....+++.+|.++...|++++|+.+++++++..|+...
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 7777777777777777665510 00023346799999999999999999999999999999997643
No 136
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.76 E-value=4.7e-17 Score=120.60 Aligned_cols=135 Identities=19% Similarity=0.082 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFE 189 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 189 (349)
+..+..+|.++...|++++|+..|+++++.+|.+..++..+|.++...|++++|+.++++++..+|.++.++..+|.++.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 56778888899999999999999999999888888889999999999999999999999999999988889999999999
Q ss_pred HhhCHHHHHHHHHHHHccccccHHHHHHH--HHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 190 KQEKISEAMKCYNKSRAIGDADGKALFKL--AKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 190 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l--~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
..|++++|+.++++++..+|.+..++..+ +..+...|++++|+..+.+.....+.
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 99999999999999999888888877444 44477888999999888887765443
No 137
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.8e-17 Score=115.95 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHH
Q psy9209 179 RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAF 258 (349)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (349)
..+..+|..+...|++++|+..|+++++.+|.++.++..+|.++...|++++|+..+++++.++|. ...++
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~ 75 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN---------FVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---------cHHHH
Confidence 344444555555555555555555555555555555555555555555555555555555555444 44455
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHccc------CChHHHHHHHHHHH
Q psy9209 259 KYLANHHLKANNLDTAYKCAQKCLQHE------ETAEEAKSLLRSIA 299 (349)
Q Consensus 259 ~~l~~~~~~~g~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~ 299 (349)
+.+|.++...|++++|+..|+++++++ |++..++..++.+.
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 555555555555555555555555554 45555554444443
No 138
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.76 E-value=5.3e-17 Score=125.63 Aligned_cols=131 Identities=15% Similarity=0.106 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK 190 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 190 (349)
..++.+|.++...|++++|+..|++++ +| ++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++..
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 456777888888888888888888875 33 567888888888888888888888888888888888888888888888
Q ss_pred hhCHHHHHHHHHHHHccccccH----------------HHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 191 QEKISEAMKCYNKSRAIGDADG----------------KALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 191 ~~~~~~A~~~~~~a~~~~~~~~----------------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
.|++++|+..|+++++..|.+. .+++.+|.++...|++++|+..+++++...|.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 8888888888888888665544 89999999999999999999999999999887
No 139
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.75 E-value=2.9e-18 Score=131.16 Aligned_cols=151 Identities=14% Similarity=0.029 Sum_probs=107.4
Q ss_pred CcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccH----------------HHHHHHHH
Q psy9209 89 DESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDY----------------RAWYGLGQ 152 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~----------------~~~~~l~~ 152 (349)
.|+++++.+.+.......+.....+..+|..+...|++++|+..|+++++..|.++ .++.++|.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 96 (198)
T 2fbn_A 17 LYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLAT 96 (198)
T ss_dssp -----CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHH
Confidence 35666666666555555555666777777777777788888887877777776665 77888888
Q ss_pred HHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHH
Q psy9209 153 TYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAA 232 (349)
Q Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 232 (349)
++...|++++|+.++++++..+|.++.+++.+|.++...|++++|+..|+++++++|.+..++..++.++...++..++.
T Consensus 97 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 97 CYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888887777776665
Q ss_pred -HHHHHHH
Q psy9209 233 -DLFMEFV 239 (349)
Q Consensus 233 -~~~~~~~ 239 (349)
..+.+.+
T Consensus 177 ~~~~~~~f 184 (198)
T 2fbn_A 177 KLTFGGMF 184 (198)
T ss_dssp --------
T ss_pred HHHHHHHh
Confidence 3344333
No 140
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=5.3e-17 Score=115.51 Aligned_cols=122 Identities=18% Similarity=0.162 Sum_probs=109.4
Q ss_pred CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q psy9209 106 NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALG 185 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 185 (349)
.|....++..+|.++...|++++|+..|+++++.+|.+..++..+|.++...|++++|+.+++++++..|.++.++..+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 45667888999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCc
Q psy9209 186 EAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNE 227 (349)
Q Consensus 186 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 227 (349)
.++...|++++|+.++++++..+|.+..++..++.++..+|+
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999999888999999988887664
No 141
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.75 E-value=2e-17 Score=124.07 Aligned_cols=124 Identities=19% Similarity=0.222 Sum_probs=74.4
Q ss_pred HhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH-HHHhhCH--HHH
Q psy9209 121 MEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEA-FEKQEKI--SEA 197 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~--~~A 197 (349)
...|++++|+..++++++.+|.++.++..+|.++...|++++|+.+|++++...|.++.++..+|.+ +...|++ ++|
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A 100 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQT 100 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHH
Confidence 3455666666666666666666666666666666666666666666666666666666666666666 5556665 666
Q ss_pred HHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 198 MKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 198 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
+..+++++..+|.++.++..+|.++...|++++|+..|++++...|.
T Consensus 101 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 101 RAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Confidence 66666666666666666666666666666666666666666666554
No 142
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.74 E-value=4.9e-17 Score=115.26 Aligned_cols=123 Identities=21% Similarity=0.205 Sum_probs=100.8
Q ss_pred CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q psy9209 106 NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALG 185 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 185 (349)
+|..+..+..+|.++...|++++|+..|++++...|.++.++..+|.++...|++++|+.++++++...|.++.++..+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 45566777888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcH
Q psy9209 186 EAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNET 228 (349)
Q Consensus 186 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 228 (349)
.++...|++++|+.++++++...|.++.++..++.++...|++
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 8888888888888888888888888888888888888777764
No 143
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.74 E-value=5.1e-17 Score=120.22 Aligned_cols=116 Identities=18% Similarity=0.089 Sum_probs=104.9
Q ss_pred CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q psy9209 106 NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALG 185 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 185 (349)
.+..+..+..+|.++...|++++|+..|+++++++|.++.++..+|.++...|++++|+..|+++++++|+++.+++.+|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHH
Q psy9209 186 EAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKL 221 (349)
Q Consensus 186 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 221 (349)
.++..+|++++|+.+|+++++++|++...+...+..
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLE 122 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 999999999999999999999999988876666544
No 144
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.74 E-value=1.4e-16 Score=129.62 Aligned_cols=162 Identities=10% Similarity=0.007 Sum_probs=123.9
Q ss_pred HHhcCCCcchHHHHHHHHHHHhhCcccHH------HHHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HHHHHHH
Q psy9209 83 AQKRQPDESSSQAVLYFQRALKLNPNYLG------VWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YRAWYGL 150 (349)
Q Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l 150 (349)
...+...|++++|+..+++++...+..+. .+..+|.++...|++++|+.+|++++...+.. ..++.++
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 33444468888888888888887665443 23457888888888888888888888854322 3468888
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhc-------CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc------HHHHHH
Q psy9209 151 GQTYEILRLPYYGLYYYKQAHMV-------RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD------GKALFK 217 (349)
Q Consensus 151 ~~~~~~~~~~~~A~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~ 217 (349)
|.+|...|++++|+.+|+++++. .+....++.++|.+|..+|++++|+.++++++++.+.. +.++..
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 88888888888888888888842 12233578889999999999999999999988875443 778889
Q ss_pred HHHHHHhcCc-HHHHHHHHHHHHhcccc
Q psy9209 218 LAKLYDKLNE-TEAAADLFMEFVSKLDT 244 (349)
Q Consensus 218 l~~~~~~~~~-~~~A~~~~~~~~~~~~~ 244 (349)
+|.++..+|+ +++|+..|++++.+...
T Consensus 242 lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 242 RGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 9999999994 68999999999887654
No 145
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.74 E-value=4.5e-18 Score=146.72 Aligned_cols=152 Identities=14% Similarity=0.117 Sum_probs=134.4
Q ss_pred CcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc---------------HHHHHHHHHH
Q psy9209 89 DESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD---------------YRAWYGLGQT 153 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~ 153 (349)
.+++++|+..+++++...|.....+..+|.++...|++++|+..|++++++.|.+ ..++.++|.+
T Consensus 247 l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888889999999999999999999999999999999998887 6899999999
Q ss_pred HHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHH
Q psy9209 154 YEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAAD 233 (349)
Q Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 233 (349)
+..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..++++++|..
T Consensus 327 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~ 406 (457)
T 1kt0_A 327 YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDR 406 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred -HHHHHHh
Q psy9209 234 -LFMEFVS 240 (349)
Q Consensus 234 -~~~~~~~ 240 (349)
.+.+++.
T Consensus 407 ~~~~~~f~ 414 (457)
T 1kt0_A 407 RIYANMFK 414 (457)
T ss_dssp HHHHHC--
T ss_pred HHHHHHHh
Confidence 4444443
No 146
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.74 E-value=1.3e-15 Score=135.79 Aligned_cols=223 Identities=9% Similarity=-0.027 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHH-HHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy9209 93 SQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAI-QCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAH 171 (349)
Q Consensus 93 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~-~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 171 (349)
......|++++...|..+..|+..+..+...|+.++|. ..|++++...|.+...|..++......|+++.|..+|++++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999997 99999999999999999999999999999999999999999
Q ss_pred hc-----------CCC-----------ChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc-ccccHHHHHHHHHHHHhcCc-
Q psy9209 172 MV-----------RPN-----------DPRMLTALGEAFEKQEKISEAMKCYNKSRAI-GDADGKALFKLAKLYDKLNE- 227 (349)
Q Consensus 172 ~~-----------~~~-----------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~~~~- 227 (349)
.. .|. ...+|...+.+..+.|..+.|...|.++++. .+....++...+.+....++
T Consensus 406 ~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d 485 (679)
T 4e6h_A 406 DRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKD 485 (679)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCC
Confidence 75 243 3457888999999999999999999999988 55557788878877777654
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccC---ChHHHHHHHHHHHHHcCC
Q psy9209 228 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE---TAEEAKSLLRSIAQKRQP 304 (349)
Q Consensus 228 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~---~~~~~~~~l~~~~~~~~~ 304 (349)
++.|..+|+.+++..|. .+..|...+......|+.+.|...|++++...| .....|..........|+
T Consensus 486 ~e~Ar~ife~~Lk~~p~---------~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~ 556 (679)
T 4e6h_A 486 TKTACKVLELGLKYFAT---------DGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGS 556 (679)
T ss_dssp CHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCC---------chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999998 788888999999999999999999999999887 467888888999999999
Q ss_pred CCCchhHHHHhhhcCCCCCC
Q psy9209 305 DESSSQPMECAVVLDPVPPS 324 (349)
Q Consensus 305 ~~~A~~~~~~a~~~~p~~~~ 324 (349)
.+.+....+++.+..|+++.
T Consensus 557 ~~~~~~v~~R~~~~~P~~~~ 576 (679)
T 4e6h_A 557 LNSVRTLEKRFFEKFPEVNK 576 (679)
T ss_dssp SHHHHHHHHHHHHHSTTCCH
T ss_pred HHHHHHHHHHHHHhCCCCcH
Confidence 99999999999999999765
No 147
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.74 E-value=1.6e-16 Score=117.67 Aligned_cols=133 Identities=14% Similarity=0.022 Sum_probs=121.9
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHH
Q psy9209 143 DYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLY 222 (349)
Q Consensus 143 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 222 (349)
.+..+..+|.++...|++++|+..|++++...|.++.++..+|.++...|++++|+.++++++..+|.++.++..+|.++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHH--HHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 223 DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAF--KYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 223 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
...|++++|+..+++++...|. ...++ ..++..+...|++++|+..+.++...
T Consensus 92 ~~~~~~~~A~~~~~~a~~~~p~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKVKPH---------DKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999999999999999999988 56666 44555588889999999998887543
No 148
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.73 E-value=1.5e-16 Score=122.05 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc------CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc---cc----c
Q psy9209 144 YRAWYGLGQTYEILRLPYYGLYYYKQAHMV------RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI---GD----A 210 (349)
Q Consensus 144 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~----~ 210 (349)
..++..+|.++...|++++|+.++++++.+ .|....++..+|.++...|++++|+.++++++.. .+ .
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 333444444444444444444444444431 1222334445555555555555555555555544 11 2
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 211 DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
...++..+|.++...|++++|+..+++++...+. .........++..+|.++...|++++|..++++++++
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ---ADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDI 176 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 2345556666666666666666666666655433 1122223445566777777777777777777777655
No 149
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.73 E-value=8e-17 Score=123.54 Aligned_cols=157 Identities=14% Similarity=0.062 Sum_probs=128.2
Q ss_pred CCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHhCCHH
Q psy9209 88 PDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI------NNLDYRAWYGLGQTYEILRLPY 161 (349)
Q Consensus 88 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~ 161 (349)
..|++++|.+.++......+....++..+|.++...|++++|+..+++++++ .+....++..+|.++...|+++
T Consensus 4 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 83 (203)
T 3gw4_A 4 EAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWD 83 (203)
T ss_dssp ---CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 3588888888665555433366788999999999999999999999999983 4556788999999999999999
Q ss_pred HHHHHHHHHHhc---CCCC----hHHHHHHHHHHHHhhCHHHHHHHHHHHHccccc------cHHHHHHHHHHHHhcCcH
Q psy9209 162 YGLYYYKQAHMV---RPND----PRMLTALGEAFEKQEKISEAMKCYNKSRAIGDA------DGKALFKLAKLYDKLNET 228 (349)
Q Consensus 162 ~A~~~~~~~~~~---~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~ 228 (349)
+|+.++++++.+ .+++ ..++..+|.++...|++++|+.++++++...+. ...++..+|.++...|++
T Consensus 84 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 163 (203)
T 3gw4_A 84 AARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNL 163 (203)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCH
Confidence 999999999987 4433 356889999999999999999999999876322 234568899999999999
Q ss_pred HHHHHHHHHHHhcccc
Q psy9209 229 EAAADLFMEFVSKLDT 244 (349)
Q Consensus 229 ~~A~~~~~~~~~~~~~ 244 (349)
++|...+++++.+...
T Consensus 164 ~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 164 LEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988765
No 150
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.73 E-value=1.6e-16 Score=111.93 Aligned_cols=115 Identities=17% Similarity=0.084 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHH
Q psy9209 178 PRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFA 257 (349)
Q Consensus 178 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
+.++..+|.++...|++++|+.+|+++++++|+++.++.++|.++..+|++++|+..+++++.+.|.. .........+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~a~~ 85 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET--RADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc--chhhHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999888862 1222334678
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHH
Q psy9209 258 FKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLL 295 (349)
Q Consensus 258 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l 295 (349)
+..+|.++..+|++++|+.+|++++...|+. +....+
T Consensus 86 ~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~-~~~~~l 122 (127)
T 4gcn_A 86 MSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP-ELVKKV 122 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH-HHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH-HHHHHH
Confidence 9999999999999999999999999988864 333333
No 151
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=1.7e-16 Score=112.84 Aligned_cols=122 Identities=12% Similarity=0.009 Sum_probs=116.7
Q ss_pred CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHH
Q psy9209 140 NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLA 219 (349)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 219 (349)
.|.....+..+|.++...|++++|+..+++++...|.+..++..+|.++...|++++|+.+++++++.+|.++.++..+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC
Q psy9209 220 KLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN 270 (349)
Q Consensus 220 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 270 (349)
.++...|++++|+..+++++...|. ...++..++.++..+|+
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~---------~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSS---------CKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGG---------GTHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCC---------chHHHHHHHHHHHHhcC
Confidence 9999999999999999999999998 78999999999988774
No 152
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.73 E-value=1.6e-16 Score=111.96 Aligned_cols=100 Identities=17% Similarity=0.207 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc-------HHHHHH
Q psy9209 145 RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD-------GKALFK 217 (349)
Q Consensus 145 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~ 217 (349)
.++..+|..+...|++++|+.+|+++++++|+++.++.++|.+|..+|++++|+..++++++++|.+ ..++..
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 3344444444444455555555555444445444444555555555555555555555554444432 234555
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 218 LAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 218 l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
+|.++..+|++++|+..|++++...|+
T Consensus 89 lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 555666666666666666666555443
No 153
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.72 E-value=2e-16 Score=112.07 Aligned_cols=124 Identities=14% Similarity=0.074 Sum_probs=118.5
Q ss_pred hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHH
Q psy9209 139 INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKL 218 (349)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 218 (349)
.+|.+...+..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+.++++++...|.++.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCH
Q psy9209 219 AKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNL 271 (349)
Q Consensus 219 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 271 (349)
|.++...|++++|+..+++++...|. ...++..+|.++...|++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~---------~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPD---------NETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCcc---------chHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998 789999999999998875
No 154
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.72 E-value=2.7e-16 Score=112.55 Aligned_cols=121 Identities=16% Similarity=0.121 Sum_probs=106.0
Q ss_pred hCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 184 (349)
.+|..+..+..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+..+++++.++|+++.++..+
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 83 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 83 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHccccc-----cHHHHHHHHHHHHhc
Q psy9209 185 GEAFEKQEKISEAMKCYNKSRAIGDA-----DGKALFKLAKLYDKL 225 (349)
Q Consensus 185 ~~~~~~~~~~~~A~~~~~~a~~~~~~-----~~~~~~~l~~~~~~~ 225 (349)
|.++...|++++|+..|++++...|+ +..+...+..+....
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887 566666666655443
No 155
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.71 E-value=2.2e-16 Score=116.76 Aligned_cols=116 Identities=12% Similarity=0.053 Sum_probs=107.6
Q ss_pred CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHH
Q psy9209 140 NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLA 219 (349)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 219 (349)
.+.+...+..+|.++...|++++|+.+|+++++++|+++.++..+|.++...|++++|+..|+++++++|.++.+++.+|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHH
Q psy9209 220 KLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANH 264 (349)
Q Consensus 220 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (349)
.++..+|++++|+..|++++.+.|+ ....+...+..
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~~~l~ 122 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGN---------GGSDAMKRGLE 122 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSS---------SCCHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCC---------chHHHHHHHHH
Confidence 9999999999999999999999998 55555555543
No 156
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.71 E-value=2.1e-16 Score=110.20 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQ 191 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 191 (349)
.++.+|..+...|++++|+..|+++++.+|+++.+|+.+|.++...|++++|+..|+++++++|+++.++..+|.++...
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46788888888999999999999999999988889999999999999999999999999999998888888999999999
Q ss_pred hCHHHHHHHHHHHHccccccH
Q psy9209 192 EKISEAMKCYNKSRAIGDADG 212 (349)
Q Consensus 192 ~~~~~A~~~~~~a~~~~~~~~ 212 (349)
|++++|+..++++++.+|.+.
T Consensus 99 g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHhCcCCC
Confidence 999999999999888888654
No 157
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.71 E-value=1.1e-17 Score=144.20 Aligned_cols=147 Identities=14% Similarity=0.087 Sum_probs=135.6
Q ss_pred hcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC---------------hHHHHHHHH
Q psy9209 122 EMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND---------------PRMLTALGE 186 (349)
Q Consensus 122 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~ 186 (349)
.++++++|+..|+++++..|.....+..+|.++...|++++|+..|++++++.|.+ ..++.++|.
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 325 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAM 325 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999998 689999999
Q ss_pred HHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHH
Q psy9209 187 AFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHL 266 (349)
Q Consensus 187 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 266 (349)
++..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|++++.++|. +..++..++.++.
T Consensus 326 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~---------~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 326 CYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ---------NKAARLQISMCQK 396 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-------------CHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred HhCCHHHHHHH
Q psy9209 267 KANNLDTAYKC 277 (349)
Q Consensus 267 ~~g~~~~A~~~ 277 (349)
..|++++|...
T Consensus 397 ~~~~~~~a~~~ 407 (457)
T 1kt0_A 397 KAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888653
No 158
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.71 E-value=6.9e-16 Score=108.26 Aligned_cols=121 Identities=27% Similarity=0.472 Sum_probs=102.7
Q ss_pred Cccc-HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH
Q psy9209 106 NPNY-LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 106 ~~~~-~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 184 (349)
+|.. ..++..+|.++...|++++|+..+++++...|.+..++..+|.++...|++++|+.++++++...|.++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 3443 677888888888899999999999999888888888888889998889999999999999888888888888889
Q ss_pred HHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC
Q psy9209 185 GEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN 226 (349)
Q Consensus 185 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 226 (349)
|.++...|++++|+.++++++..+|.++.++..++.++...|
T Consensus 84 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 84 GNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999999999998888888888888888876654
No 159
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.70 E-value=6.7e-17 Score=115.29 Aligned_cols=103 Identities=17% Similarity=0.080 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcc-------cH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHhc----
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNL-------DY-----RAWYGLGQTYEILRLPYYGLYYYKQAHMV---- 173 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-------~~-----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---- 173 (349)
...+...|..+...|+|++|+..|+++++++|+ +. .+|.++|.++..+|++++|+..+++++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 345677777788888888888888888887777 22 26666666666666666666666666665
Q ss_pred ---CCCChHHH----HHHHHHHHHhhCHHHHHHHHHHHHccccccH
Q psy9209 174 ---RPNDPRML----TALGEAFEKQEKISEAMKCYNKSRAIGDADG 212 (349)
Q Consensus 174 ---~~~~~~~~----~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 212 (349)
+|+++.+| +++|.++..+|++++|+..|++++++.|.+.
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 55555555 5555555555555555555555555555443
No 160
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.70 E-value=3.7e-16 Score=115.33 Aligned_cols=119 Identities=14% Similarity=0.056 Sum_probs=103.4
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHh------------------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI------------------NNLDYRAWYGLGQTYEILRLPYYGLYYYKQA 170 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 170 (349)
....+...|..+...|++++|+..|++++.. +|....++.++|.++...|++++|+..++++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3567788889999999999999999999888 6777889999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccH-HHHHHHHHHHHhcCc
Q psy9209 171 HMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADG-KALFKLAKLYDKLNE 227 (349)
Q Consensus 171 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~~~~l~~~~~~~~~ 227 (349)
+.++|+++.+++.+|.++..+|++++|+..|++++.++|+++ .+...++.+....++
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 667777766655443
No 161
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.70 E-value=1.6e-15 Score=105.23 Aligned_cols=114 Identities=14% Similarity=0.135 Sum_probs=101.9
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
.+..+..+|.++...|++++|+..|++++...|.++.++..+|.++...|++++|+..+++++...|.++.++..+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35678888999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHccccccHHHHHHHHHHH
Q psy9209 189 EKQEKISEAMKCYNKSRAIGDADGKALFKLAKLY 222 (349)
Q Consensus 189 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 222 (349)
...|++++|+..++++++.+|.++.++..++.+.
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999998888888887764
No 162
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.68 E-value=2.7e-15 Score=105.22 Aligned_cols=121 Identities=24% Similarity=0.353 Sum_probs=112.6
Q ss_pred Cccc-HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHH
Q psy9209 140 NNLD-YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKL 218 (349)
Q Consensus 140 ~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 218 (349)
+|.. ..++..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+.++++++...|.++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 4444 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhC
Q psy9209 219 AKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKAN 269 (349)
Q Consensus 219 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 269 (349)
|.++...|++++|+..+++++...|. ...++..++.++...|
T Consensus 84 a~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 84 GNAYYKQGDYDEAIEYYQKALELDPN---------NAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998 7899999999987765
No 163
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.67 E-value=7.1e-16 Score=113.78 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHcc------------------ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAI------------------GDADGKALFKLAKLYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 241 (349)
.+...|..++..|++++|+..|++++.. +|....++.++|.++..+|++++|+..+++++.+
T Consensus 13 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 13 ALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 3444555555555555555555555554 5666778888888888888888888888888888
Q ss_pred ccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChH-HHHHHHHHHHHHcCC
Q psy9209 242 LDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAE-EAKSLLRSIAQKRQP 304 (349)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~-~~~~~l~~~~~~~~~ 304 (349)
+|. .+.+++.+|.++...|++++|+..|+++++++|+++ .+...++.+....++
T Consensus 93 ~p~---------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 93 EET---------NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp STT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCc---------chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 887 688888888888888888888888888888888877 666677666655443
No 164
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.67 E-value=1.5e-15 Score=108.60 Aligned_cols=105 Identities=13% Similarity=0.028 Sum_probs=64.9
Q ss_pred CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHH
Q psy9209 140 NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLA 219 (349)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 219 (349)
+|.++..+..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+..+++++..+|.++.+++.+|
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 34455566666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 220 KLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 220 ~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
.++...|++++|+..|++++...|+
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHChh
Confidence 6666666666666666666665554
No 165
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.67 E-value=8.5e-14 Score=119.65 Aligned_cols=206 Identities=9% Similarity=-0.000 Sum_probs=164.6
Q ss_pred hhhhHHhhCcHHHHHHHHHHHHHhccccCCCCCc--------chhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFVSKLDTFAAPPDK--------TCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAE 73 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~ 73 (349)
+|+-+...|++++|++.|.++++..+........ .....++..+|.+|...|++++|++++.+++...+...
T Consensus 10 ~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~ 89 (434)
T 4b4t_Q 10 EARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFA 89 (434)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc
Confidence 4677889999999999999999655443221111 11124688999999999999999999999998755432
Q ss_pred ---HHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCc------ccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-----
Q psy9209 74 ---EAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNP------NYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI----- 139 (349)
Q Consensus 74 ---~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~----- 139 (349)
........++..+...|++++|+.++++++...+ ....++..+|.++...|++++|+..+++++..
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~ 169 (434)
T 4b4t_Q 90 KSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD 169 (434)
T ss_dssp HHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS
T ss_pred chHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc
Confidence 2233455667778888999999999999987643 34678899999999999999999999999875
Q ss_pred -CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC---CC----hHHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 140 -NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRP---ND----PRMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 140 -~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~---~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
.+....++..+|.+|...|++++|..++++++...+ .. ...+..+|.++...|++++|..+|.+++..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 170 DKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 344578899999999999999999999999987633 22 246677888899999999999999999875
No 166
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.67 E-value=3.1e-14 Score=127.03 Aligned_cols=229 Identities=12% Similarity=0.038 Sum_probs=197.6
Q ss_pred HHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHH-HHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHH
Q psy9209 56 DTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAV-LYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYR 134 (349)
Q Consensus 56 ~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 134 (349)
+.....|++++...|..+..|..++...... |+.++|. ..|++++...|.+...|...+......|+++.|..+|+
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~---~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iye 402 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEK---NTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTIL 402 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH---SCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4456789999999999999998888776554 7788897 99999999999999999999999999999999999999
Q ss_pred HHHHhC-----------c-----------ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-CCCChHHHHHHHHHHHHh
Q psy9209 135 QAIEIN-----------N-----------LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV-RPNDPRMLTALGEAFEKQ 191 (349)
Q Consensus 135 ~a~~~~-----------~-----------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 191 (349)
+++... | ....+|...+....+.|..+.|...|.++++. .+....+|...+.+....
T Consensus 403 k~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~ 482 (679)
T 4e6h_A 403 SCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHI 482 (679)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh
Confidence 999752 3 23457889999999999999999999999987 445567787777777776
Q ss_pred hC-HHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCC
Q psy9209 192 EK-ISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN 270 (349)
Q Consensus 192 ~~-~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 270 (349)
++ ++.|..+|+.+++..|+++..+...+......|+.+.|..+|++++...|. ......+|......-...|+
T Consensus 483 ~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~------~~~~~~lw~~~~~fE~~~G~ 556 (679)
T 4e6h_A 483 SKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISD------SHLLKMIFQKVIFFESKVGS 556 (679)
T ss_dssp TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS------TTHHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHcCC
Confidence 54 899999999999999999999999999999999999999999999998773 12267888889999999999
Q ss_pred HHHHHHHHHHHHcccCChHHHHH
Q psy9209 271 LDTAYKCAQKCLQHEETAEEAKS 293 (349)
Q Consensus 271 ~~~A~~~~~~a~~~~~~~~~~~~ 293 (349)
.+.+....+++.+..|+++....
T Consensus 557 ~~~~~~v~~R~~~~~P~~~~~~~ 579 (679)
T 4e6h_A 557 LNSVRTLEKRFFEKFPEVNKLEE 579 (679)
T ss_dssp SHHHHHHHHHHHHHSTTCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcHHHH
Confidence 99999999999999998754433
No 167
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.67 E-value=8.5e-16 Score=109.60 Aligned_cols=103 Identities=17% Similarity=0.100 Sum_probs=97.2
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-------ChH-----HHHHHHHHHHHhhCHHHHHHHHHHHHcc---
Q psy9209 143 DYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN-------DPR-----MLTALGEAFEKQEKISEAMKCYNKSRAI--- 207 (349)
Q Consensus 143 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-------~~~-----~~~~l~~~~~~~~~~~~A~~~~~~a~~~--- 207 (349)
....+..+|..+...|++++|+..|+++++++|+ +.. +|.++|.++..+|++++|+.++++++++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 3567889999999999999999999999999999 443 9999999999999999999999999999
Q ss_pred ----ccccHHHH----HHHHHHHHhcCcHHHHHHHHHHHHhccccc
Q psy9209 208 ----GDADGKAL----FKLAKLYDKLNETEAAADLFMEFVSKLDTF 245 (349)
Q Consensus 208 ----~~~~~~~~----~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 245 (349)
+|+++.+| +++|.++..+|++++|+..|++++++.|++
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 99999999 999999999999999999999999999984
No 168
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=2.8e-15 Score=108.63 Aligned_cols=120 Identities=13% Similarity=0.033 Sum_probs=105.9
Q ss_pred hCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD---YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRML 181 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 181 (349)
..|.....+..+|..+...|++++|+..|+++++..|++ ..++..+|.++...|++++|+..+++++...|.++.++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 456678888999999999999999999999999988887 88889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHh
Q psy9209 182 TALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDK 224 (349)
Q Consensus 182 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 224 (349)
..+|.++...|++++|+.+|++++..+|++..++..++.+...
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999999999888888888776543
No 169
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.67 E-value=5.5e-17 Score=140.48 Aligned_cols=122 Identities=18% Similarity=0.208 Sum_probs=88.9
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCH
Q psy9209 81 SIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLP 160 (349)
Q Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 160 (349)
.++..+...|++++|+..|+++++.+|+++.++..+|.++..+|++++|+..++++++++|+++.++.++|.+|..+|++
T Consensus 11 ~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~ 90 (477)
T 1wao_1 11 TQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKF 90 (477)
T ss_dssp SSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 34455666777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHH--HHHhhCHHHHHHHHH
Q psy9209 161 YYGLYYYKQAHMVRPNDPRMLTALGEA--FEKQEKISEAMKCYN 202 (349)
Q Consensus 161 ~~A~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~A~~~~~ 202 (349)
++|+..|+++++++|++..++..++.+ +...|++++|+..++
T Consensus 91 ~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 91 RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 777777777777777777777777776 667777777777777
No 170
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.67 E-value=8.3e-16 Score=107.19 Aligned_cols=97 Identities=15% Similarity=0.057 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC
Q psy9209 147 WYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN 226 (349)
Q Consensus 147 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 226 (349)
++.+|..+...|++++|+..|+++++.+|+++.+|+.+|.++...|++++|+..|+++++++|+++.++..+|.++...|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred cHHHHHHHHHHHHhccc
Q psy9209 227 ETEAAADLFMEFVSKLD 243 (349)
Q Consensus 227 ~~~~A~~~~~~~~~~~~ 243 (349)
++++|+..+++++...|
T Consensus 100 ~~~~A~~~~~~al~~~P 116 (121)
T 1hxi_A 100 NANAALASLRAWLLSQP 116 (121)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 44444444444444444
No 171
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.66 E-value=5e-15 Score=102.68 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHH
Q psy9209 179 RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAF 258 (349)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (349)
..+..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++...|. ...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~ 75 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD---------WGKGY 75 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------CHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc---------cHHHH
Confidence 344444555555555555555555555555544555555555555555555555555555554444 34455
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHH
Q psy9209 259 KYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSI 298 (349)
Q Consensus 259 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 298 (349)
..+|.++...|++++|..+++++++..|+++.++..++.+
T Consensus 76 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 76 SRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 5555555555555555555555555555555544444443
No 172
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.65 E-value=2.6e-15 Score=129.16 Aligned_cols=190 Identities=9% Similarity=-0.028 Sum_probs=84.1
Q ss_pred CcchHHHHHHHHHHHhhCcccH-----------------HHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HH
Q psy9209 89 DESSSQAVLYFQRALKLNPNYL-----------------GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YR 145 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~-----------------~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~ 145 (349)
.|++++|++.|.++++..|... .++..+|.+|...|++++|++++.+++...+.. ..
T Consensus 17 ~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T 4b4t_Q 17 EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKV 96 (434)
T ss_dssp HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 3555555555555555544321 134445555555555555555555554432221 12
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCC------CChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc------ccccHH
Q psy9209 146 AWYGLGQTYEILRLPYYGLYYYKQAHMVRP------NDPRMLTALGEAFEKQEKISEAMKCYNKSRAI------GDADGK 213 (349)
Q Consensus 146 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~ 213 (349)
+...++.++...|++++|+.++++++...+ ....++..+|.++...|++++|..++++++.. .+....
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~ 176 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVD 176 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHH
Confidence 233344444444455555555544443311 11234444444444455555554444444433 122233
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcc-hHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 214 ALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTC-GFFAFKYLANHHLKANNLDTAYKCAQKC 281 (349)
Q Consensus 214 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a 281 (349)
++..+|.+|...|++++|...+++++...+. ....+. ....+..+|.++...|++++|..+|.++
T Consensus 177 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a 242 (434)
T 4b4t_Q 177 VHLLESKVYHKLRNLAKSKASLTAARTAANS---IYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFES 242 (434)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc---CCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4444444444444444444444444444443 222111 1233444444444444444444444443
No 173
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=6.5e-15 Score=106.67 Aligned_cols=118 Identities=18% Similarity=0.122 Sum_probs=90.7
Q ss_pred CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc---HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCC
Q psy9209 174 RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD---GKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPD 250 (349)
Q Consensus 174 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 250 (349)
.|.+...+..+|..+...|++++|+.+|+++++..|++ ..++..+|.++...|++++|+..+++++...|.
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------ 97 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG------ 97 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC------
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc------
Confidence 45566777777777777777777777777777777766 677777888888888888888888888877776
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHH
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQ 300 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 300 (349)
...+++.+|.++...|++++|+.+|+++++.+|++..++..++.+..
T Consensus 98 ---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 98 ---DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp ---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 67777888888888888888888888888888877777777776654
No 174
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.65 E-value=5.2e-15 Score=104.59 Aligned_cols=113 Identities=16% Similarity=0.088 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCcccH---HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC---hHHHHHHH
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDY---RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND---PRMLTALG 185 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~l~ 185 (349)
+++.+|.++...|++++|+..|+++++..|+++ .+++.+|.++...|++++|+..|++++...|++ +.+++.+|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 456778888888888888888888888888776 688888888888888888888888888888887 67788888
Q ss_pred HHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHh
Q psy9209 186 EAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDK 224 (349)
Q Consensus 186 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 224 (349)
.++...|++++|+..|++++...|+++.+......+...
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 888888888888888888888888777666555554433
No 175
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.65 E-value=3.5e-16 Score=129.52 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccH-----------------HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDY-----------------RAWYGLGQTYEILRLPYYGLYYYKQAHMV 173 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 173 (349)
..+..+|..+...|++++|+..|++++...|.+. .++.++|.++..+|++++|+.++++++++
T Consensus 180 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 180 DRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3344444444444444444444444444444433 37888888888888999999999988888
Q ss_pred CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHH-HHhcCcHHHHHHHHHHHHhcccc
Q psy9209 174 RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKL-YDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 174 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
+|+++.+++++|.++..+|++++|+..|+++++++|++..++..++.+ ....+..+++...|.+++...|.
T Consensus 260 ~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 260 EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 888888888899998888999999999999888888888888888887 44556677788888888888776
No 176
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.64 E-value=3.5e-15 Score=105.55 Aligned_cols=116 Identities=20% Similarity=0.149 Sum_probs=86.9
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC-------hHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND-------PRML 181 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-------~~~~ 181 (349)
.+..+..+|.++...|++++|+..|++++...|.++.++..+|.++...|++++|+.++++++...|.+ +.++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 456677777777777777778777777777777777777777777777777777777777777776665 6777
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhc
Q psy9209 182 TALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKL 225 (349)
Q Consensus 182 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 225 (349)
..+|.++...|++++|+.+|++++...| ++.....++.+....
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 7778888888888888888888777777 566666666665443
No 177
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.64 E-value=7.9e-16 Score=133.24 Aligned_cols=126 Identities=15% Similarity=0.090 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHH
Q psy9209 41 AFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEY 120 (349)
Q Consensus 41 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 120 (349)
++..+|..+...|++++|+..|+++++.+|++..++..++ .++...|++++|+..++++++++|+++.++..+|.++
T Consensus 8 ~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg---~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 84 (477)
T 1wao_1 8 ELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 84 (477)
T ss_dssp TSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH---HHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHH---HHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4667888888899999999999999999988877755444 4455678999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHHHHhCcccHHHHHHHHHH--HHHhCCHHHHHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQT--YEILRLPYYGLYYYKQ 169 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~--~~~~~~~~~A~~~~~~ 169 (349)
..+|++++|+..|+++++++|++..++..++.+ +...|++++|+..+++
T Consensus 85 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 85 MALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999888888888887 7888899999988883
No 178
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.64 E-value=1.5e-15 Score=104.30 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=66.6
Q ss_pred CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--ChHHHHH
Q psy9209 106 NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN--DPRMLTA 183 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~ 183 (349)
+|+++.++..+|.++...|++++|+..|+++++..|.+..++..+|.++...|++++|+.+++++++..|. +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 45555566666666666666666666666666666666666666666666666666666666666666666 6666666
Q ss_pred HHHHHHHh-hCHHHHHHHHHHHHccccc
Q psy9209 184 LGEAFEKQ-EKISEAMKCYNKSRAIGDA 210 (349)
Q Consensus 184 l~~~~~~~-~~~~~A~~~~~~a~~~~~~ 210 (349)
+|.++... |++++|+.++++++...|.
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 66666666 6666666666666665554
No 179
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.63 E-value=2.4e-15 Score=106.99 Aligned_cols=99 Identities=12% Similarity=0.131 Sum_probs=53.0
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQ 169 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 169 (349)
+.+++|++.++++++++|+++++|.++|.++...++++.+.... +.+++|+..|++
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al------------------------~~~~eAi~~le~ 71 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAK------------------------QMIQEAITKFEE 71 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHH------------------------HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhH------------------------hHHHHHHHHHHH
Confidence 45566666666666666666666666666666555543111100 012344555555
Q ss_pred HHhcCCCChHHHHHHHHHHHHh-----------hCHHHHHHHHHHHHccccccH
Q psy9209 170 AHMVRPNDPRMLTALGEAFEKQ-----------EKISEAMKCYNKSRAIGDADG 212 (349)
Q Consensus 170 ~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 212 (349)
+++++|+...+++++|.+|..+ |++++|+.+|+++++++|++.
T Consensus 72 AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 72 ALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 5555555555555555554444 467777777777777777653
No 180
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.63 E-value=5.7e-15 Score=108.67 Aligned_cols=104 Identities=21% Similarity=0.247 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHccccc------cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcc
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAIGDA------DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTC 253 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 253 (349)
++..+|.++...|++++|+.++++++...+. ...++..+|.++...|++++|+..+++++...+. ....+.
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~ 127 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE---LKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH---ccchHh
Confidence 4555666666666666666666666555332 2556777888888888888888888888877654 223344
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccC
Q psy9209 254 GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE 286 (349)
Q Consensus 254 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 286 (349)
...++..+|.++...|++++|..++++++++..
T Consensus 128 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 128 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 577788888888888888888888888877643
No 181
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.63 E-value=9.1e-15 Score=103.32 Aligned_cols=115 Identities=14% Similarity=0.066 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHccccccH---HHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHH
Q psy9209 181 LTALGEAFEKQEKISEAMKCYNKSRAIGDADG---KALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFA 257 (349)
Q Consensus 181 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
++.+|.++...|++++|+..|+++++..|+++ .+++.+|.++...|++++|+..|++++...|+ .+..+.+
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~------~~~~~~~ 78 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT------HDKAAGG 78 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------STTHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC------CcccHHH
Confidence 45566666666666666666666666666555 56666666666666666666666666666665 1112566
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHH
Q psy9209 258 FKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQK 301 (349)
Q Consensus 258 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 301 (349)
++.+|.++...|++++|+..|++++...|+++.+......+...
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 66666666666666666666666666666666555555544443
No 182
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.63 E-value=2e-15 Score=107.42 Aligned_cols=103 Identities=12% Similarity=0.101 Sum_probs=67.2
Q ss_pred HhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcch----------HHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 50 LKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESS----------SQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 50 ~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
.+.+.+++|+..++++++++|++++++..++.+... .+++ ++|+..|+++++++|+...+++++|.+
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~---l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~a 89 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE---LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNA 89 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH---HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHH
Confidence 456789999999999999999999998777765433 3554 355555555555555555555555555
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP 178 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (349)
|..+|.+ .|+.+.+ .|++++|+.+|+++++++|++.
T Consensus 90 y~~lg~l-------------~P~~~~a----------~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 90 YTSFAFL-------------TPDETEA----------KHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHH-------------CCCHHHH----------HHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhccc-------------Ccchhhh----------hccHHHHHHHHHHHHHhCCCCH
Confidence 5554421 2222111 1467777777777777777754
No 183
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.63 E-value=2.3e-15 Score=124.57 Aligned_cols=153 Identities=13% Similarity=0.060 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHH
Q psy9209 41 AFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEY 120 (349)
Q Consensus 41 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 120 (349)
.+..+|..++..|++++|+..|++++...|++.. +...+++.++...+. ..++.++|.++
T Consensus 181 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~-----------~~~~~~~~~~~~~l~---------~~~~~nla~~~ 240 (338)
T 2if4_A 181 RRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLYGKYQDMALAVK---------NPCHLNIAACL 240 (338)
T ss_dssp HHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHH-----------HTCCHHHHHHHHHHH---------THHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchh-----------hhhcccHHHHHHHHH---------HHHHHHHHHHH
Confidence 4445555555555555555555555555444321 111233333332221 14889999999
Q ss_pred HhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH-HHHhhCHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEA-FEKQEKISEAMK 199 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~ 199 (349)
..+|++++|+..|+++++++|++..+++++|.+|..+|++++|+..|+++++++|+++.++..++.+ ....+..+++..
T Consensus 241 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~ 320 (338)
T 2if4_A 241 IKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKE 320 (338)
T ss_dssp HTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 445677888999
Q ss_pred HHHHHHccccccHH
Q psy9209 200 CYNKSRAIGDADGK 213 (349)
Q Consensus 200 ~~~~a~~~~~~~~~ 213 (349)
.|.+++...|.++.
T Consensus 321 ~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 321 MYKGIFKGKDEGGA 334 (338)
T ss_dssp --------------
T ss_pred HHHHhhCCCCCCCC
Confidence 99999999887643
No 184
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.63 E-value=8.3e-15 Score=122.52 Aligned_cols=125 Identities=13% Similarity=0.170 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHH----------------hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIE----------------INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV 173 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~----------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 173 (349)
...+..+|..+...|++++|+..|+++++ .+|.+..++.++|.++..+|++++|+.++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45678888888899999999999998888 67778899999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHH
Q psy9209 174 RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADL 234 (349)
Q Consensus 174 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 234 (349)
+|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++.+++.+.
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998888877653
No 185
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.62 E-value=1.2e-14 Score=102.73 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=107.9
Q ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc-------HHH
Q psy9209 142 LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD-------GKA 214 (349)
Q Consensus 142 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~ 214 (349)
..+..+..+|.++...|++++|+.++++++...|.++.++..+|.++...|++++|+.++++++...|.+ +.+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999998877 889
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhC
Q psy9209 215 LFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKAN 269 (349)
Q Consensus 215 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 269 (349)
+..+|.++...|++++|+..|++++...|+ ...+..++.+....+
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~----------~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT----------PDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHH
Confidence 999999999999999999999999998775 677777777765543
No 186
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.61 E-value=1.8e-15 Score=105.00 Aligned_cols=90 Identities=16% Similarity=0.097 Sum_probs=42.8
Q ss_pred CChHHHHHHHHHHHHh---CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHH
Q psy9209 124 KNTNAAIQCYRQAIEI---NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKC 200 (349)
Q Consensus 124 ~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 200 (349)
|++++|+..|+++++. +|.++.++..+|.++...|++++|+.+|+++++.+|+++.++..+|.++...|++++|+..
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 83 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVEL 83 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHH
Confidence 4444444444444444 3444444444555555555555555555555554554444445555555555555555555
Q ss_pred HHHHHccccccHH
Q psy9209 201 YNKSRAIGDADGK 213 (349)
Q Consensus 201 ~~~a~~~~~~~~~ 213 (349)
+++++...|+++.
T Consensus 84 ~~~al~~~p~~~~ 96 (117)
T 3k9i_A 84 LLKIIAETSDDET 96 (117)
T ss_dssp HHHHHHHHCCCHH
T ss_pred HHHHHHhCCCcHH
Confidence 5555544444443
No 187
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.60 E-value=5.3e-15 Score=101.56 Aligned_cols=107 Identities=8% Similarity=-0.009 Sum_probs=74.9
Q ss_pred ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 208 GDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
+|+++.++..+|.++...|++++|+..+++++...|. ...++..+|.++...|++++|+.+++++++..|.
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE---------ESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC---------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4556666666777777777777777777777776666 5666777777777777777777777777777776
Q ss_pred --hHHHHHHHHHHHHHc-CCCCCchhHHHHhhhcCCCCC
Q psy9209 288 --AEEAKSLLRSIAQKR-QPDESSSQPMECAVVLDPVPP 323 (349)
Q Consensus 288 --~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~~ 323 (349)
+..++..++.++... |++++|++++++++...|.++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 73 EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 677777777777777 777777777777777766654
No 188
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.60 E-value=2.5e-14 Score=119.60 Aligned_cols=140 Identities=22% Similarity=0.216 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
..+..+|..++..|++++|+..|+++++..+..+. ..........+|....++.++|.+
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~nla~~ 282 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRA---------------------AAEDADGAKLQPVALSCVLNIGAC 282 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH---------------------HSCHHHHGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCcc---------------------ccChHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999999999887665420 111344455778888999999999
Q ss_pred HHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMK 199 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 199 (349)
+..+|++++|+.+++++++++|+++.+++.+|.+|..+|++++|+..|+++++++|++..++..++.++...++++++..
T Consensus 283 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 283 KLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888765
Q ss_pred H
Q psy9209 200 C 200 (349)
Q Consensus 200 ~ 200 (349)
.
T Consensus 363 ~ 363 (370)
T 1ihg_A 363 A 363 (370)
T ss_dssp C
T ss_pred H
Confidence 3
No 189
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.60 E-value=5.1e-15 Score=102.67 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=77.5
Q ss_pred hhCHHHHHHHHHHHHcc---ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH
Q psy9209 191 QEKISEAMKCYNKSRAI---GDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK 267 (349)
Q Consensus 191 ~~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 267 (349)
+|++++|+.+|+++++. +|.++.++..+|.++...|++++|+..|++++...|+ .+.++..+|.++..
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~ 73 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN---------HQALRVFYAMVLYN 73 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------chHHHHHHHHHHHH
Confidence 56777788888888877 5777778888888888888888888888888888777 67778888888888
Q ss_pred hCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCC
Q psy9209 268 ANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDE 306 (349)
Q Consensus 268 ~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~ 306 (349)
.|++++|+..+++++...|+++........+....+..+
T Consensus 74 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~~~l~ 112 (117)
T 3k9i_A 74 LGRYEQGVELLLKIIAETSDDETIQSYKQAILFYADKLD 112 (117)
T ss_dssp HTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHHTTCTT
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 888888888888888887777766655555544444443
No 190
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.59 E-value=3.3e-14 Score=104.55 Aligned_cols=135 Identities=19% Similarity=0.219 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC------
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD------YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND------ 177 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------ 177 (349)
..++..+|.++...|++++|+.+++++++..+.. ..++..+|.++...|++++|+.++++++...+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 4567778888888888888888888888765432 2467788888888888888888888887764432
Q ss_pred hHHHHHHHHHHHHhhCHHHHHHHHHHHHcccc------ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 178 PRMLTALGEAFEKQEKISEAMKCYNKSRAIGD------ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 178 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
..++..+|.++...|++++|+.++++++...+ ....++..+|.++...|++++|+..+++++.+...
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 45677888888888888888888888887632 23567788899999999999999999998887654
No 191
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=99.54 E-value=1.7e-11 Score=106.41 Aligned_cols=281 Identities=9% Similarity=-0.068 Sum_probs=188.0
Q ss_pred CcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCC-HHHHHHHHHHHhhh---hhchHHHHHHHHHHHHh
Q psy9209 10 NETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANN-LDTAYKCAQKCLQH---EETAEEAKSLLRSIAQK 85 (349)
Q Consensus 10 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~A~~~~~~~l~~---~~~~~~~~~~l~~~~~~ 85 (349)
|+++.+..+|++++...| +. .+|..........++ .+.....|+.++.. +|.+...|..+..+...
T Consensus 28 ~~~e~~~~iferal~~~p-------s~---~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~s~~iW~~Yi~f~~~ 97 (493)
T 2uy1_A 28 KDYRSLESLFGRCLKKSY-------NL---DLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWDSYGLYKEYIEEEGK 97 (493)
T ss_dssp TCHHHHHHHHHHHSTTCC-------CH---HHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTTCHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHhccCC-------CH---HHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHh
Confidence 778888888888884332 11 345555544444442 34556677777753 56666666555543211
Q ss_pred c-CCCcchHHHHHHHHHHHhhCcccHH-------------------------------------------------HHHH
Q psy9209 86 R-QPDESSSQAVLYFQRALKLNPNYLG-------------------------------------------------VWTL 115 (349)
Q Consensus 86 ~-~~~~~~~~A~~~~~~~~~~~~~~~~-------------------------------------------------~~~~ 115 (349)
. ...++.+.+...|++++..-+.... .|..
T Consensus 98 ~~~~~~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~W~~ 177 (493)
T 2uy1_A 98 IEDEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAAR 177 (493)
T ss_dssp CSSHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 1 0135677788888888774222111 1111
Q ss_pred HHHHHHhcCC---------hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy9209 116 LGHEYMEMKN---------TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGE 186 (349)
Q Consensus 116 la~~~~~~~~---------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 186 (349)
... ...++ .+.....|++++...|..+..|...+..+...|+.+.|...|++++.. |.+...+...+.
T Consensus 178 y~~--~E~~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 178 LID--LEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHH--HHHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHH--HHhcCCccCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 111 11121 234567888888888888888888888888888889999999988888 877655443333
Q ss_pred ----------------------------------------HHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC
Q psy9209 187 ----------------------------------------AFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN 226 (349)
Q Consensus 187 ----------------------------------------~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 226 (349)
...+.+..+.|...|+++ ...+....+|...+.+....+
T Consensus 255 ~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~ 333 (493)
T 2uy1_A 255 VMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYAT 333 (493)
T ss_dssp HTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHH
T ss_pred hcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHC
Confidence 233467788888999988 433335567766676666555
Q ss_pred -cHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCC
Q psy9209 227 -ETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPD 305 (349)
Q Consensus 227 -~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 305 (349)
+.+.|...|+.+++..|+ .+..+...+......|+.+.|...|+++. .....|..........|+.
T Consensus 334 ~d~~~ar~ife~al~~~~~---------~~~~~~~yid~e~~~~~~~~aR~l~er~~----k~~~lw~~~~~fE~~~G~~ 400 (493)
T 2uy1_A 334 GSRATPYNIFSSGLLKHPD---------STLLKEEFFLFLLRIGDEENARALFKRLE----KTSRMWDSMIEYEFMVGSM 400 (493)
T ss_dssp CCSHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHTCHHHHHHHHHHSC----CBHHHHHHHHHHHHHHSCH
T ss_pred CChHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCH
Confidence 589999999999988777 56677777888888899999999999873 4567777777777888998
Q ss_pred CCchhHHHHhhh
Q psy9209 306 ESSSQPMECAVV 317 (349)
Q Consensus 306 ~~A~~~~~~a~~ 317 (349)
+.+...+++++.
T Consensus 401 ~~~r~v~~~~~~ 412 (493)
T 2uy1_A 401 ELFRELVDQKMD 412 (493)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888888875
No 192
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=99.53 E-value=4.1e-12 Score=110.22 Aligned_cols=183 Identities=9% Similarity=-0.044 Sum_probs=123.4
Q ss_pred hhC-cHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhc
Q psy9209 8 KLN-ETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKR 86 (349)
Q Consensus 8 ~~g-~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 86 (349)
+.| +...|..+|++++...|. |+++.+..+|++++...| +.+.|..+......+
T Consensus 6 ~~~~~i~~aR~vyer~l~~~P~------------------------~~~e~~~~iferal~~~p-s~~LW~~Y~~f~~~~ 60 (493)
T 2uy1_A 6 KMGVELSSPSAIMEHARRLYMS------------------------KDYRSLESLFGRCLKKSY-NLDLWMLYIEYVRKV 60 (493)
T ss_dssp ------CCHHHHHHHHHHHHHT------------------------TCHHHHHHHHHHHSTTCC-CHHHHHHHHHHHHHH
T ss_pred HcCcchHHHHHHHHHHHHHCCC------------------------CCHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHh
Confidence 456 377888888888854432 789999999999999888 566777766655544
Q ss_pred CCCcchHHHHHHHHHHHhh---CcccHHHHHHHHHHHH----hcCChHHHHHHHHHHHHhCcccHH--------------
Q psy9209 87 QPDESSSQAVLYFQRALKL---NPNYLGVWTLLGHEYM----EMKNTNAAIQCYRQAIEINNLDYR-------------- 145 (349)
Q Consensus 87 ~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~----~~~~~~~A~~~~~~a~~~~~~~~~-------------- 145 (349)
. ...+.....|+.++.. +|.....|......+. ..|+.+.+..+|++++...+.+..
T Consensus 61 ~--~~~~~i~~~fe~al~~vg~d~~s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~ 138 (493)
T 2uy1_A 61 S--QKKFKLYEVYEFTLGQFENYWDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELN 138 (493)
T ss_dssp C------CTHHHHHHHHHHSTTCTTCHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC
T ss_pred C--chHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhc
Confidence 2 2345567778888864 6777888888777654 346788899999999884222111
Q ss_pred -----------------------------------HHHHHHHHHHHhCC---------HHHHHHHHHHHHhcCCCChHHH
Q psy9209 146 -----------------------------------AWYGLGQTYEILRL---------PYYGLYYYKQAHMVRPNDPRML 181 (349)
Q Consensus 146 -----------------------------------~~~~l~~~~~~~~~---------~~~A~~~~~~~~~~~~~~~~~~ 181 (349)
.|..... ...++ .+.....|++++...|..+.+|
T Consensus 139 ~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~W~~y~~--~E~~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW 216 (493)
T 2uy1_A 139 KITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAARLID--LEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVY 216 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHH--HHHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred cccHHHHHHHHhHHHHHHHHHHHHHHHHHhhccHHHHHHHHH--HHhcCCccCcchhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 1111111 11121 2345678888888888888999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHH
Q psy9209 182 TALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAK 220 (349)
Q Consensus 182 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 220 (349)
...+..+...|+.++|...|++++.. |.+...+...+.
T Consensus 217 ~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 217 FFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 99998888889999999999999888 877655554433
No 193
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.44 E-value=2.4e-12 Score=88.71 Aligned_cols=82 Identities=17% Similarity=0.149 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy9209 94 QAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV 173 (349)
Q Consensus 94 ~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 173 (349)
+|+..|+++++.+|+++.+++.+|.++...|++++|+..|+++++.+|.+..++..+|.++...|++++|+..|++++.+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 35566666666666666666666666666666666666666666666666666666666666666666666666666665
Q ss_pred CC
Q psy9209 174 RP 175 (349)
Q Consensus 174 ~~ 175 (349)
.|
T Consensus 83 ~~ 84 (115)
T 2kat_A 83 AQ 84 (115)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 194
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.44 E-value=1.1e-12 Score=90.46 Aligned_cols=85 Identities=15% Similarity=0.121 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHc
Q psy9209 127 NAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRA 206 (349)
Q Consensus 127 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 206 (349)
++|+..|+++++.+|.++.+++.+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+..|++++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q psy9209 207 IGDAD 211 (349)
Q Consensus 207 ~~~~~ 211 (349)
..|..
T Consensus 82 ~~~~~ 86 (115)
T 2kat_A 82 AAQSR 86 (115)
T ss_dssp HHHHH
T ss_pred hcccc
Confidence 87753
No 195
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.5e-13 Score=94.10 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC------hHHHHH
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND------PRMLTA 183 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~ 183 (349)
+.++..+|.++...|++++|+..|+++++.+|.++.++.++|.++...|++++|+..+++++.++|++ ..++..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 45666677777777777777777777777777777777777777777777777777777777777766 566666
Q ss_pred HHHHHHHhhCHHHHHHHHH
Q psy9209 184 LGEAFEKQEKISEAMKCYN 202 (349)
Q Consensus 184 l~~~~~~~~~~~~A~~~~~ 202 (349)
+|.++...|++++|+..++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHH
Confidence 6666666666655554443
No 196
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.43 E-value=8.8e-13 Score=90.25 Aligned_cols=96 Identities=10% Similarity=-0.005 Sum_probs=84.1
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCCh--
Q psy9209 211 DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETA-- 288 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~-- 288 (349)
++..+..+|.++...|++++|+..|++++...|. .+.++..+|.++...|++++|+..++++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 73 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ---------NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEH 73 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccH
Confidence 4567888999999999999999999999998888 78889999999999999999999999999999987
Q ss_pred ----HHHHHHHHHHHHHcCCCCCchhHHHHh
Q psy9209 289 ----EEAKSLLRSIAQKRQPDESSSQPMECA 315 (349)
Q Consensus 289 ----~~~~~~l~~~~~~~~~~~~A~~~~~~a 315 (349)
..++..++.++...|+++.|+..+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 74 VAIRSKLQYRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHhHHHHh
Confidence 888889999999999988888776653
No 197
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.41 E-value=4.5e-12 Score=83.22 Aligned_cols=83 Identities=30% Similarity=0.516 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
.+.++..+|.++...|++++|+..|+++++.+|.++.++..+|.++...|++++|+.+++++++.+|+++.++..+|.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 34555666666666666666666666666666666666666666666666666666666666666666666666666555
Q ss_pred HHh
Q psy9209 189 EKQ 191 (349)
Q Consensus 189 ~~~ 191 (349)
...
T Consensus 88 ~~~ 90 (91)
T 1na3_A 88 QKQ 90 (91)
T ss_dssp HHH
T ss_pred Hhc
Confidence 543
No 198
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.39 E-value=5.4e-12 Score=82.84 Aligned_cols=85 Identities=27% Similarity=0.397 Sum_probs=80.9
Q ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHH
Q psy9209 142 LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKL 221 (349)
Q Consensus 142 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 221 (349)
....++..+|.++...|++++|+.++++++...|.++.++..+|.++...|++++|+.+++++++.+|.++.++..+|.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcC
Q psy9209 222 YDKLN 226 (349)
Q Consensus 222 ~~~~~ 226 (349)
+...|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87764
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.36 E-value=1.2e-11 Score=106.50 Aligned_cols=127 Identities=11% Similarity=-0.047 Sum_probs=107.5
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCC---hH
Q psy9209 116 LGHEYMEMKNTNAAIQCYRQAIEI--------NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV-----RPND---PR 179 (349)
Q Consensus 116 la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~ 179 (349)
.+..+..+|+|++|+..+++++++ +|....++.++|.+|..+|+|++|+.++++++.+ .|++ ..
T Consensus 315 ~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~ 394 (490)
T 3n71_A 315 KIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGM 394 (490)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 445577899999999999999986 3445678899999999999999999999999986 3444 46
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHcc-----c---cccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAI-----G---DADGKALFKLAKLYDKLNETEAAADLFMEFVSKL 242 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 242 (349)
.+.++|.+|..+|++++|+.+|++++.+ . |........++.++..++.+++|...|+++.+..
T Consensus 395 ~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 395 AVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999976 3 4445567789999999999999999999987644
No 200
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.31 E-value=7.5e-11 Score=83.89 Aligned_cols=111 Identities=23% Similarity=0.183 Sum_probs=77.4
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----hCCHHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI----LRLPYYGLY 165 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~ 165 (349)
+++++|+.+|+++.+.... .+. +|.+|...+.+++|+.+|+++.+. .++.+++++|.+|.. .+++++|+.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~--~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM--FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT--THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH--hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 4667777777777766533 233 777777777777777777777765 456777777777776 677777777
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHH----hhCHHHHHHHHHHHHccc
Q psy9209 166 YYKQAHMVRPNDPRMLTALGEAFEK----QEKISEAMKCYNKSRAIG 208 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~ 208 (349)
+|+++.+. .++.+.+++|.+|.. .+++++|+.+|+++.+..
T Consensus 83 ~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 83 YYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 77777665 566777777777777 677777777777777653
No 201
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.31 E-value=4.6e-11 Score=102.83 Aligned_cols=120 Identities=14% Similarity=0.032 Sum_probs=91.7
Q ss_pred CCcchHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh--------CcccHHHHHHHH
Q psy9209 88 PDESSSQAVLYFQRALKL--------NPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI--------NNLDYRAWYGLG 151 (349)
Q Consensus 88 ~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~ 151 (349)
.+|++++|+..+++++++ +|....++.++|.+|..+|+|++|+.++++++++ .|.....+.+||
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 457888888888888764 2334556788888888888888888888888875 344566778888
Q ss_pred HHHHHhCCHHHHHHHHHHHHhc-----CCCCh---HHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 152 QTYEILRLPYYGLYYYKQAHMV-----RPNDP---RMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
.+|..+|++++|+.++++++.+ .|+++ .....++.++..++++++|...|.++.+.
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888875 45544 55667888888888888888888887654
No 202
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.31 E-value=7.7e-12 Score=83.59 Aligned_cols=89 Identities=18% Similarity=0.252 Sum_probs=58.6
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCcccHH-HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhh
Q psy9209 114 TLLGHEYMEMKNTNAAIQCYRQAIEINNLDYR-AWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQE 192 (349)
Q Consensus 114 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 192 (349)
+..|.++...|++++|+..|+++++.+|.++. +++.+|.++...|++++|+..|+++++++|+++.++.. +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 44566666777777777777777777776666 77777777777777777777777777777766665532 4
Q ss_pred CHHHHHHHHHHHHccccc
Q psy9209 193 KISEAMKCYNKSRAIGDA 210 (349)
Q Consensus 193 ~~~~A~~~~~~a~~~~~~ 210 (349)
.+.+++..|++++..+|+
T Consensus 76 ~~~~a~~~~~~~~~~~p~ 93 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLE 93 (99)
T ss_dssp HHHHHHHHHCCTTHHHHC
T ss_pred HHHHHHHHHHHHhccCcc
Confidence 555666666665555544
No 203
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.30 E-value=1.8e-11 Score=81.84 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=35.9
Q ss_pred CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc
Q psy9209 140 NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIG 208 (349)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 208 (349)
+|+++.+++.+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|++++++.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 344555555555555555555555555555555555555555555555555555555555555555443
No 204
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.30 E-value=2.3e-11 Score=81.35 Aligned_cols=86 Identities=22% Similarity=0.248 Sum_probs=68.1
Q ss_pred hCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC--hHHHH
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND--PRMLT 182 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~ 182 (349)
.+|+++.+++.+|.++...|++++|+..|+++++++|+++.+|..+|.++...|++++|+..|++++++.|.. .....
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 81 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS 81 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHH
Confidence 3688889999999999999999999999999999999999999999999999999999999999998876543 23333
Q ss_pred HHHHHHHH
Q psy9209 183 ALGEAFEK 190 (349)
Q Consensus 183 ~l~~~~~~ 190 (349)
.+..++..
T Consensus 82 ~l~~~l~~ 89 (100)
T 3ma5_A 82 ELQDAKLK 89 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.26 E-value=1.3e-10 Score=82.64 Aligned_cols=111 Identities=20% Similarity=0.202 Sum_probs=100.3
Q ss_pred CChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH----hhCHHHHHH
Q psy9209 124 KNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEK----QEKISEAMK 199 (349)
Q Consensus 124 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~ 199 (349)
+++++|+.+|+++.+..+.. +. +|.+|...+..++|+.+|+++.+. .++.+++.+|.+|.. .+++++|+.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 46899999999999876433 33 999999999999999999999987 789999999999998 899999999
Q ss_pred HHHHHHccccccHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhcc
Q psy9209 200 CYNKSRAIGDADGKALFKLAKLYDK----LNETEAAADLFMEFVSKL 242 (349)
Q Consensus 200 ~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~ 242 (349)
+|+++.+. .++.+.+.+|.+|.. .+++++|+.+|+++.+..
T Consensus 83 ~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 83 YYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 99999987 578999999999999 899999999999999874
No 206
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.23 E-value=2.9e-11 Score=80.72 Aligned_cols=89 Identities=8% Similarity=-0.008 Sum_probs=81.7
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC
Q psy9209 148 YGLGQTYEILRLPYYGLYYYKQAHMVRPNDPR-MLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN 226 (349)
Q Consensus 148 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 226 (349)
+..|.++...|++++|+..|+++++.+|+++. ++..+|.++...|++++|+..|+++++.+|+++.++.. +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 56889999999999999999999999999999 99999999999999999999999999999999888754 5
Q ss_pred cHHHHHHHHHHHHhcccc
Q psy9209 227 ETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 227 ~~~~A~~~~~~~~~~~~~ 244 (349)
.+.+++..|+++....|+
T Consensus 76 ~~~~a~~~~~~~~~~~p~ 93 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLE 93 (99)
T ss_dssp HHHHHHHHHCCTTHHHHC
T ss_pred HHHHHHHHHHHHhccCcc
Confidence 678888888888888776
No 207
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.22 E-value=1.2e-09 Score=88.83 Aligned_cols=142 Identities=13% Similarity=0.014 Sum_probs=100.5
Q ss_pred HHhhCcccHHHH--HHHHHHHHhcCC---hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCH-------HHHH-HHHH
Q psy9209 102 ALKLNPNYLGVW--TLLGHEYMEMKN---TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLP-------YYGL-YYYK 168 (349)
Q Consensus 102 ~~~~~~~~~~~~--~~la~~~~~~~~---~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~-------~~A~-~~~~ 168 (349)
+....|.++.+| +..|..+...++ ..+|+.+|+++++++|+.+.++..++.+|.....+ ..++ ..+.
T Consensus 186 ~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~ 265 (372)
T 3ly7_A 186 LQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEID 265 (372)
T ss_dssp HHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHH
Confidence 334455555444 455665555444 46788888888888888877777777766421111 0111 1111
Q ss_pred --HHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 169 --QAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 169 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
.++...|.++.++..++..+...|++++|+..+++++.++| +...+..+|.++...|++++|++.|.+++.++|.
T Consensus 266 a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 266 NIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 22345788888888888888888999999999999999987 4677788899999999999999999999999887
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.21 E-value=1.2e-09 Score=85.08 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=88.0
Q ss_pred HhcCCCChHHHHHHHHHHHH-----------hhCHHHHHHHHHHHHccccc--cHHHHHHHHHHHHhc-----CcHHHHH
Q psy9209 171 HMVRPNDPRMLTALGEAFEK-----------QEKISEAMKCYNKSRAIGDA--DGKALFKLAKLYDKL-----NETEAAA 232 (349)
Q Consensus 171 ~~~~~~~~~~~~~l~~~~~~-----------~~~~~~A~~~~~~a~~~~~~--~~~~~~~l~~~~~~~-----~~~~~A~ 232 (349)
-+.+|++++.++..|.+... .+...+|...++++++++|+ +..+|..+|.+|... |+.++|.
T Consensus 145 ~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~ 224 (301)
T 3u64_A 145 SRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAH 224 (301)
T ss_dssp TTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHH
T ss_pred HHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHH
Confidence 34577788877777766643 12357888899999999998 567899999998885 8999999
Q ss_pred HHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH-hCCHHHHHHHHHHHHcccCC
Q psy9209 233 DLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK-ANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~ 287 (349)
.+|++++.++|+. ...+++..|..+.. +|++++|..++++++..+|.
T Consensus 225 ~~ferAL~LnP~~--------~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 225 TAFEHLTRYCSAH--------DPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHCCTT--------CSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHhCCCC--------CchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 9999999999861 38888889998888 48999999999999988765
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.17 E-value=2.5e-09 Score=86.94 Aligned_cols=146 Identities=5% Similarity=-0.157 Sum_probs=104.5
Q ss_pred HHHHhCcccHHHH--HHHHHHHHHhC---CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCH--------HHHHHHH
Q psy9209 135 QAIEINNLDYRAW--YGLGQTYEILR---LPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKI--------SEAMKCY 201 (349)
Q Consensus 135 ~a~~~~~~~~~~~--~~l~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~A~~~~ 201 (349)
++....|.++.+| +..|..+...+ ...+|+.+|+++++++|+.+.++..++.++.....+ ......+
T Consensus 185 r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 185 TLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp HHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 3444455554443 34455555444 357899999999999999999988888877632211 1111122
Q ss_pred HH--HHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHH
Q psy9209 202 NK--SRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQ 279 (349)
Q Consensus 202 ~~--a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 279 (349)
+. ++..+|..+.++..++..+...|++++|+..+++++.++|+ ..++..+|.++...|++++|++.|.
T Consensus 265 ~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s----------~~a~~llG~~~~~~G~~~eA~e~~~ 334 (372)
T 3ly7_A 265 DNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS----------WLNYVLLGKVYEMKGMNREAADAYL 334 (372)
T ss_dssp HHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC----------HHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 22 22446778888888888888889999999999999988764 6677888899999999999999999
Q ss_pred HHHcccCChHH
Q psy9209 280 KCLQHEETAEE 290 (349)
Q Consensus 280 ~a~~~~~~~~~ 290 (349)
+|+.++|..+.
T Consensus 335 ~AlrL~P~~~t 345 (372)
T 3ly7_A 335 TAFNLRPGANT 345 (372)
T ss_dssp HHHHHSCSHHH
T ss_pred HHHhcCCCcCh
Confidence 99999888764
No 210
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.12 E-value=6.2e-09 Score=81.14 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=90.5
Q ss_pred hCcccHHHHHHHHHHHHH---h--C------CHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHh-----hCHHHHHHH
Q psy9209 139 INNLDYRAWYGLGQTYEI---L--R------LPYYGLYYYKQAHMVRPN--DPRMLTALGEAFEKQ-----EKISEAMKC 200 (349)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~---~--~------~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~~-----~~~~~A~~~ 200 (349)
.+|++++.++..|.+... . | ....|...++++++++|+ +..+|..+|.+|... |+.++|..+
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 477888777766665532 1 2 347889999999999999 677999999999985 999999999
Q ss_pred HHHHHcccccc-HHHHHHHHHHHHh-cCcHHHHHHHHHHHHhcccc
Q psy9209 201 YNKSRAIGDAD-GKALFKLAKLYDK-LNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 201 ~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~ 244 (349)
|+++++++|+. ..+++.+|..+.. .|++++|...+++++...|.
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 99999999975 9999999999988 49999999999999998876
No 211
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.03 E-value=4.9e-09 Score=68.31 Aligned_cols=72 Identities=8% Similarity=-0.087 Sum_probs=49.4
Q ss_pred CcccHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy9209 106 NPNYLGVWTLLGHEYMEMKN---TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND 177 (349)
Q Consensus 106 ~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 177 (349)
+|+++..+..+|.+++..++ .++|...++++++.+|+++.+++.+|..+...|+|++|+.+|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 46666677777776655444 5677777777777777777777777777777777777777777777766663
No 212
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.02 E-value=2.8e-07 Score=80.02 Aligned_cols=159 Identities=9% Similarity=-0.037 Sum_probs=110.4
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhC-cccHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHhC-cccHHHHHHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLN-PNYLGVWTLLGHEYMEMKN---------TNAAIQCYRQAIEIN-NLDYRAWYGL 150 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~---------~~~A~~~~~~a~~~~-~~~~~~~~~l 150 (349)
....+.+.|+.++|++.|+++.+.. +.+..+|..+-.++...+. .+.|.++|+++.... +.+..+|..+
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~l 111 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNG 111 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3355667788888888887776643 1234555555555554433 577778887776642 2256677778
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcC-CCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc--ccccHHHHHHHHHHHHhcCc
Q psy9209 151 GQTYEILRLPYYGLYYYKQAHMVR-PNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI--GDADGKALFKLAKLYDKLNE 227 (349)
Q Consensus 151 ~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~ 227 (349)
...|.+.|++++|..+++++.+.. +.+...|..+-..|.+.|+.++|..+|+++.+. .| +...+..+...+.+.|+
T Consensus 112 I~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~ 190 (501)
T 4g26_A 112 ARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSMDTKN 190 (501)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhhCCC
Confidence 888888888888888888777642 235667777777888888888888888887765 33 56677777788888888
Q ss_pred HHHHHHHHHHHHhc
Q psy9209 228 TEAAADLFMEFVSK 241 (349)
Q Consensus 228 ~~~A~~~~~~~~~~ 241 (349)
.++|.++++++.+.
T Consensus 191 ~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 191 ADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888877654
No 213
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=9.1e-09 Score=72.37 Aligned_cols=96 Identities=10% Similarity=-0.046 Sum_probs=79.9
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHhC-c-ccHHHHHHHHHHHHHhCCHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMK---NTNAAIQCYRQAIEIN-N-LDYRAWYGLGQTYEILRLPYYGL 164 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~a~~~~-~-~~~~~~~~l~~~~~~~~~~~~A~ 164 (349)
+....+.+.|.+.++.+|.+.++.+.+|.++.+.+ +.++++..++..++.+ | ...++++.+|..+.+.|+|++|.
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 45566777788888888888899999999999988 5668999999999988 7 56888999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHH
Q psy9209 165 YYYKQAHMVRPNDPRMLTALG 185 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~l~ 185 (349)
.++++++++.|++..+....-
T Consensus 92 ~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 92 KYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHH
Confidence 999999999998877655443
No 214
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.99 E-value=1.1e-08 Score=72.07 Aligned_cols=100 Identities=21% Similarity=0.199 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHccccccHHHHHHHHHHHHhcC---cHHHHHHHHHHHHhcc-cccCCCCCCcchHHHHHHHHHHHHHh
Q psy9209 193 KISEAMKCYNKSRAIGDADGKALFKLAKLYDKLN---ETEAAADLFMEFVSKL-DTFAAPPDKTCGFFAFKYLANHHLKA 268 (349)
Q Consensus 193 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (349)
....+.+.|.+.+..++.+.++.+++|.++.+.+ +.++++..++.+++.. |.. ..+++++||..+++.
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~--------~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE--------QRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH--------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc--------hHHHHHHHHHHHHHc
Confidence 4556777788888888888999999999999988 6679999999999987 621 689999999999999
Q ss_pred CCHHHHHHHHHHHHcccCChHHHHHHHHHHHH
Q psy9209 269 NNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQ 300 (349)
Q Consensus 269 g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 300 (349)
|+|++|+.++++++++.|++..+......+..
T Consensus 85 ~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999888877665544
No 215
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.97 E-value=6.3e-09 Score=67.81 Aligned_cols=72 Identities=14% Similarity=0.065 Sum_probs=57.2
Q ss_pred CcccHHHHHHHHHHHHHhCC---HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc
Q psy9209 140 NNLDYRAWYGLGQTYEILRL---PYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD 211 (349)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 211 (349)
+|+++.++..+|.++...++ .++|...++++++.+|+++.++..+|..++..|+|++|+.+++++++.+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 56778888888888765555 6888888888888888888888888888888888888888888888887763
No 216
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.94 E-value=6.3e-09 Score=88.15 Aligned_cols=62 Identities=16% Similarity=0.086 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHcc--------ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAI--------GDADGKALFKLAKLYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 241 (349)
++.++|.+|..+|+|++|+.++++++.+ +|+....+.++|.+|..+|++++|+..|++++.+
T Consensus 342 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 342 MMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 3444555555555555555555555443 2233334455555555555555555555555543
No 217
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.93 E-value=6.9e-07 Score=77.59 Aligned_cols=173 Identities=12% Similarity=0.032 Sum_probs=138.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhC---------CHHHHHHHHHHHHhcC-CCChHH
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEIN-NLDYRAWYGLGQTYEILR---------LPYYGLYYYKQAHMVR-PNDPRM 180 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~---------~~~~A~~~~~~~~~~~-~~~~~~ 180 (349)
.+..+-..+.+.|+.++|+++|+++.+.. +.+...|..+..++...+ ..+.|...|+++.... +.+..+
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t 107 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT 107 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH
Confidence 45556678889999999999999998852 224566777766665544 3688999999987753 236778
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHccc-cccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHH
Q psy9209 181 LTALGEAFEKQEKISEAMKCYNKSRAIG-DADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFK 259 (349)
Q Consensus 181 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (349)
+..+...+.+.|++++|..+|+++.+.. ..+...|..+...+.+.|+.++|.++|+++....-.. +...|.
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P--------d~~ty~ 179 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP--------EEPELA 179 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC--------CHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC--------CHHHHH
Confidence 9999999999999999999999988762 2267888999999999999999999999998753221 578899
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHcc--cCChHHHH
Q psy9209 260 YLANHHLKANNLDTAYKCAQKCLQH--EETAEEAK 292 (349)
Q Consensus 260 ~l~~~~~~~g~~~~A~~~~~~a~~~--~~~~~~~~ 292 (349)
.+...+.+.|+.++|..++++..+. .|+.....
T Consensus 180 ~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~ 214 (501)
T 4g26_A 180 ALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFD 214 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHH
Confidence 9999999999999999999998653 56654443
No 218
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.92 E-value=1.1e-08 Score=86.78 Aligned_cols=106 Identities=14% Similarity=0.056 Sum_probs=78.4
Q ss_pred HHHHhcCChHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCC---hHHH
Q psy9209 118 HEYMEMKNTNAAIQCYRQAIEI--------NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV-----RPND---PRML 181 (349)
Q Consensus 118 ~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~ 181 (349)
.-+..+|++++|+..+++++++ +|....++.++|.+|..+|+|++|+.++++++.+ .|++ ...+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 3455778899999999988875 2334567888888898999999999999888875 3343 3567
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHcc-----ccccHH---HHHHHHHHHH
Q psy9209 182 TALGEAFEKQEKISEAMKCYNKSRAI-----GDADGK---ALFKLAKLYD 223 (349)
Q Consensus 182 ~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~---~~~~l~~~~~ 223 (349)
+++|.+|..+|++++|+.++++++++ .|+++. ++.+|+.+..
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 88899999999999999999988876 344443 4445555443
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.90 E-value=1.7e-08 Score=85.66 Aligned_cols=117 Identities=9% Similarity=-0.094 Sum_probs=93.6
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhc-----CCCCh---HHHHHHHHHHHHhhCHHHHHHHHHHHHcc--------ccccHHH
Q psy9209 151 GQTYEILRLPYYGLYYYKQAHMV-----RPNDP---RMLTALGEAFEKQEKISEAMKCYNKSRAI--------GDADGKA 214 (349)
Q Consensus 151 ~~~~~~~~~~~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~ 214 (349)
..-+...|++++|+..+++++++ .|+++ .++.++|.+|..+|+|++|+.++++++.+ +|.....
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 34456789999999999999976 34444 67889999999999999999999999976 4555678
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHh
Q psy9209 215 LFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKA 268 (349)
Q Consensus 215 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (349)
++++|.+|..+|++++|+..+++++.+.... ...++|....+..+|+.+....
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~-lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT-HGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-TCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh-cCCCChHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999875431 1234566777777777776543
No 220
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.90 E-value=2e-08 Score=85.10 Aligned_cols=84 Identities=17% Similarity=0.065 Sum_probs=41.4
Q ss_pred CChHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCC---hHHHHHHHHH
Q psy9209 124 KNTNAAIQCYRQAIEI--------NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV-----RPND---PRMLTALGEA 187 (349)
Q Consensus 124 ~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~ 187 (349)
|+|++|+..+++++++ +|....++.++|.+|..+|+|++|+.++++++.+ .|++ ...+.++|.+
T Consensus 312 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~ 391 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRL 391 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 3455555555555543 1222344445555555555555555555555543 2222 2344555555
Q ss_pred HHHhhCHHHHHHHHHHHHcc
Q psy9209 188 FEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 188 ~~~~~~~~~A~~~~~~a~~~ 207 (349)
|..+|++++|+.+|++++++
T Consensus 392 ~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 392 YMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHH
Confidence 55555555555555555544
No 221
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.83 E-value=7e-08 Score=64.59 Aligned_cols=86 Identities=16% Similarity=0.151 Sum_probs=71.5
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHH
Q psy9209 211 DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEE 290 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 290 (349)
++.-.+.+|..+...|++..|+.+|++++...+.. .........++..+|.++.++|++++|+.++++++++.|++..
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~--~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~ 81 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEG--EISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQR 81 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT--CCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhcc--CCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence 45667889999999999999999999999876431 1112347899999999999999999999999999999999998
Q ss_pred HHHHHHHH
Q psy9209 291 AKSLLRSI 298 (349)
Q Consensus 291 ~~~~l~~~ 298 (349)
+...++.+
T Consensus 82 ~~~n~~~~ 89 (104)
T 2v5f_A 82 ANGNLKYF 89 (104)
T ss_dssp HHHHHHHH
T ss_pred HHhhHHHH
Confidence 87777633
No 222
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.83 E-value=7.2e-08 Score=64.52 Aligned_cols=76 Identities=13% Similarity=-0.110 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhC-------cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHH
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEIN-------NLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLT 182 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 182 (349)
+.-++.+|..++..|+|..|+..|+++++.. +....++..+|.++.++|+++.|+.++++++++.|+++.+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 3455677777777777777777777777652 234566667777777777777777777777777777766655
Q ss_pred HHH
Q psy9209 183 ALG 185 (349)
Q Consensus 183 ~l~ 185 (349)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 555
No 223
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.53 E-value=4.6e-06 Score=57.64 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=28.4
Q ss_pred HhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q psy9209 190 KQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDT 244 (349)
Q Consensus 190 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 244 (349)
..++.++|.+.|+.++......+.+|...|....++|+...|.+.+.+++.+.|.
T Consensus 72 ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 3345555555555554444444555555555555555555555555555555443
No 224
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.52 E-value=5.1e-06 Score=56.21 Aligned_cols=102 Identities=22% Similarity=0.200 Sum_probs=78.6
Q ss_pred hhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHH---HHHHHHHHHhcc-cccCCCCCCcchHHHHHHHHHHHH
Q psy9209 191 QEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEA---AADLFMEFVSKL-DTFAAPPDKTCGFFAFKYLANHHL 266 (349)
Q Consensus 191 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~---A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 266 (349)
......+...|.+....++....+.+++|.++....+... ++..++..+... |. ...+.++.||..++
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~--------~~Rd~lY~LAvg~y 85 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKE--------EQRDYVFYLAVGNY 85 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--------hHHHHHHHHHHHHH
Confidence 3445556666777766667788888888888888777665 888888887765 42 26788889999999
Q ss_pred HhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHH
Q psy9209 267 KANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQ 300 (349)
Q Consensus 267 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 300 (349)
+.|+|++|+.+++..++..|++..+..+...+..
T Consensus 86 klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 86 RLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999999988888776655543
No 225
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.51 E-value=3.2e-06 Score=57.24 Aligned_cols=94 Identities=9% Similarity=-0.057 Sum_probs=68.0
Q ss_pred chHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHH---HHHHHHHHHHhC-c-ccHHHHHHHHHHHHHhCCHHHHHH
Q psy9209 91 SSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNA---AIQCYRQAIEIN-N-LDYRAWYGLGQTYEILRLPYYGLY 165 (349)
Q Consensus 91 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~---A~~~~~~a~~~~-~-~~~~~~~~l~~~~~~~~~~~~A~~ 165 (349)
....+...|.+....++....+.+.+|.++....+... ++.+++..+..+ | ...+.++.+|..+++.|+|++|..
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~ 95 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 95 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34455566666666666777788888888877776665 777887777766 5 456777788888888888888888
Q ss_pred HHHHHHhcCCCChHHHHHH
Q psy9209 166 YYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~l 184 (349)
+++.+++..|++..+....
T Consensus 96 ~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 96 YVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHH
Confidence 8888888888777665443
No 226
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.48 E-value=1.3e-05 Score=55.49 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=83.3
Q ss_pred hCcccHHHHHHHHHHHHhcCCh------HHHHHHHHHHHHhCccc--------HHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 105 LNPNYLGVWTLLGHEYMEMKNT------NAAIQCYRQAIEINNLD--------YRAWYGLGQTYEILRLPYYGLYYYKQA 170 (349)
Q Consensus 105 ~~~~~~~~~~~la~~~~~~~~~------~~A~~~~~~a~~~~~~~--------~~~~~~l~~~~~~~~~~~~A~~~~~~~ 170 (349)
+.|++++.|..........|+. ++-++.|++++..-|.. ...|...+.. ...++.++|...|+.+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 4677888888887777777888 77788888888765532 4455666644 5668888999999988
Q ss_pred HhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHH
Q psy9209 171 HMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKA 214 (349)
Q Consensus 171 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 214 (349)
+.++...+.+|...|..-.++|+...|...+.+++.+.|.....
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 88877778888888888888999999999999998888865443
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.26 E-value=9.8e-06 Score=57.38 Aligned_cols=132 Identities=12% Similarity=0.040 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCccc---------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC---CCChH
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD---------YRAWYGLGQTYEILRLPYYGLYYYKQAHMVR---PNDPR 179 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~---~~~~~ 179 (349)
++..-...+...|.|+.|+-....++.+..++ ..++..+|.+++..++|..|...|+++++.. +..+.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45566677788899999998888877764333 2467888999999999999999999987652 22221
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHH
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFK 259 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (349)
....++. ... ....... +.+.++.+.++.|+..+|++++|+..++..-.... .+.+..
T Consensus 102 ~~~~~~~----~ss-------~p~s~~~-~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~R----------t~kvnm 159 (167)
T 3ffl_A 102 VRPSTGN----SAS-------TPQSQCL-PSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQR----------TPKINM 159 (167)
T ss_dssp --------------------------CC-CCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGGC----------CHHHHH
T ss_pred ccccccc----cCC-------Ccccccc-cchHHHHHHHHHHHHHHCCHHHHHHHHhcCCchhc----------CHHHHH
Confidence 1111110 000 0001112 34567888899999999999999988765433222 577777
Q ss_pred HHHHHH
Q psy9209 260 YLANHH 265 (349)
Q Consensus 260 ~l~~~~ 265 (349)
.||++|
T Consensus 160 ~LakLy 165 (167)
T 3ffl_A 160 LLANLY 165 (167)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 788765
No 228
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.20 E-value=2.8e-05 Score=55.11 Aligned_cols=126 Identities=16% Similarity=0.132 Sum_probs=82.3
Q ss_pred HhcCCCcchHHHHHHHHHHHhhCcccH---------HHHHHHHHHHHhcCChHHHHHHHHHHHHhCc---ccHHHHHHHH
Q psy9209 84 QKRQPDESSSQAVLYFQRALKLNPNYL---------GVWTLLGHEYMEMKNTNAAIQCYRQAIEINN---LDYRAWYGLG 151 (349)
Q Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~~~~~~---------~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~l~ 151 (349)
..+...|.|+.|+-....++....+++ .++..+|..++..++|..|...|++++.... +.......++
T Consensus 28 k~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~ 107 (167)
T 3ffl_A 28 RDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTG 107 (167)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 334446899999999998777653333 3779999999999999999999999987532 2222211111
Q ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHH
Q psy9209 152 QTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLY 222 (349)
Q Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 222 (349)
. ...+. .... .+.+.++.+.++.|+.+.|++++|+..++..- .....+.+...||.+|
T Consensus 108 ~----~ss~p-------~s~~-~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 108 N----SASTP-------QSQC-LPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp --------------------C-CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred c----cCCCc-------cccc-ccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 0 00000 0111 23456788999999999999999999887642 2333677777888765
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.90 E-value=0.0007 Score=45.98 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=67.2
Q ss_pred cHHHHHHHHHHHHhcCcH---HHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC
Q psy9209 211 DGKALFKLAKLYDKLNET---EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~---~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
.+.+.+++|.++.+..+. .+++..++..+...|.. ..+.++.||..+.+.|+|++|..+.+.+++..|+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~--------~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~ 110 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 110 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG--------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTT
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch--------hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCC
Confidence 678888888888877654 47888888888876642 6888999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q psy9209 288 AEEAKSLLRSIAQ 300 (349)
Q Consensus 288 ~~~~~~~l~~~~~ 300 (349)
+..+......+..
T Consensus 111 N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 111 NKQVGALKSMVED 123 (134)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9888777665543
No 230
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.87 E-value=0.00072 Score=45.91 Aligned_cols=77 Identities=6% Similarity=-0.057 Sum_probs=56.9
Q ss_pred cHHHHHHHHHHHHhcCCh---HHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNT---NAAIQCYRQAIEINNL-DYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTAL 184 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~---~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 184 (349)
.+.+.+++|.++....+. .+++.+++..++.+|. ..+.++.+|..+.++|+|++|..+.+.+++..|++..+....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 456777778777776654 3577888888877773 467788888888888888888888888888888877665443
Q ss_pred H
Q psy9209 185 G 185 (349)
Q Consensus 185 ~ 185 (349)
.
T Consensus 119 ~ 119 (134)
T 3o48_A 119 S 119 (134)
T ss_dssp H
T ss_pred H
Confidence 3
No 231
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.82 E-value=0.0015 Score=45.01 Aligned_cols=77 Identities=8% Similarity=-0.036 Sum_probs=56.5
Q ss_pred cccHHHHHHHHHHHHhcCChH---HHHHHHHHHHHhCc-ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHH
Q psy9209 107 PNYLGVWTLLGHEYMEMKNTN---AAIQCYRQAIEINN-LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLT 182 (349)
Q Consensus 107 ~~~~~~~~~la~~~~~~~~~~---~A~~~~~~a~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 182 (349)
...+.+.+++|.++....+.+ +++.+++..+...| ...+.++.+|..++++|+|++|..+.+.+++..|++..+..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 345677788888887776543 57778888777766 35677778888888888888888888888888888766544
Q ss_pred H
Q psy9209 183 A 183 (349)
Q Consensus 183 ~ 183 (349)
.
T Consensus 116 L 116 (144)
T 1y8m_A 116 L 116 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.82 E-value=0.0012 Score=45.52 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=68.3
Q ss_pred cccHHHHHHHHHHHHhcCcH---HHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHccc
Q psy9209 209 DADGKALFKLAKLYDKLNET---EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE 285 (349)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~---~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 285 (349)
...+.+.+++|.++.+..+. .+++..++..+...|.. ..+.++.||..+++.|+|++|..+.+..++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~--------~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 107 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST--------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc--------hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 34778888898888877654 47888888888876642 68889999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHH
Q psy9209 286 ETAEEAKSLLRSIAQ 300 (349)
Q Consensus 286 ~~~~~~~~~l~~~~~ 300 (349)
|++..+..+...+..
T Consensus 108 P~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 108 RNNKQVGALKSMVED 122 (144)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999888777655543
No 233
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.77 E-value=0.003 Score=52.48 Aligned_cols=191 Identities=8% Similarity=-0.096 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccH-----HHHHHHHHHHHH-hCCHHHHHHHHHHHHhcCCCChHH----
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDY-----RAWYGLGQTYEI-LRLPYYGLYYYKQAHMVRPNDPRM---- 180 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~-----~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~---- 180 (349)
.+...+|..|...|++++-.+++......-+.-+ .....+-..+.. -+..+.-++....+++...+.-..
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888888888888888877776654433222 222233333322 233444455555555433222222
Q ss_pred --HHHHHHHHHHhhCHHHHHHHHHHHHccc------cccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCC-CCC
Q psy9209 181 --LTALGEAFEKQEKISEAMKCYNKSRAIG------DADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAP-PDK 251 (349)
Q Consensus 181 --~~~l~~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-~~~ 251 (349)
-..+|..|...|+|.+|...+.+..+.- ....+++..-..+|...+++.++...+.++...... + .++
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~a---i~~~p 176 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANA---IYCPP 176 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---SCCCH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhcc---CCCCH
Confidence 2378999999999999998888877641 113456677788899999999999999999776533 2 112
Q ss_pred cchHHHHHHHHHHHH-HhCCHHHHHHHHHHHHcccC-----ChHHHHHHHHHHHHHcCC
Q psy9209 252 TCGFFAFKYLANHHL-KANNLDTAYKCAQKCLQHEE-----TAEEAKSLLRSIAQKRQP 304 (349)
Q Consensus 252 ~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~-----~~~~~~~~l~~~~~~~~~ 304 (349)
...+.....-|..+. ..++|.+|...|-.+++... ....+...++.+....++
T Consensus 177 ~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 177 KVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCC
Confidence 234566667788899 89999999999998875332 222334445555555454
No 234
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.70 E-value=0.016 Score=48.17 Aligned_cols=168 Identities=11% Similarity=-0.015 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHH--HHHHHHHHHhcC-CCcchHHHHHHHHHHHhhCcccHHH----
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEA--KSLLRSIAQKRQ-PDESSSQAVLYFQRALKLNPNYLGV---- 112 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~--~~~l~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~---- 112 (349)
.+...+|..|...|+.++-.+.+......-+.-+.+ ......+...+. ..+..+.-++.+..+++...+.-..
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999999999998876554332222 122222222222 2355566677777777643332222
Q ss_pred --HHHHHHHHHhcCChHHHHHHHHHHHHhC------cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC---CCCh---
Q psy9209 113 --WTLLGHEYMEMKNTNAAIQCYRQAIEIN------NLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR---PNDP--- 178 (349)
Q Consensus 113 --~~~la~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~---~~~~--- 178 (349)
-..+|..|...|+|.+|.+.+.+..+.- ....+++.....+|...+++.++...+.++.... +.+|
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~ 179 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQ 179 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHH
Confidence 2478999999999999999999988741 1235677888899999999999999999887652 2233
Q ss_pred -HHHHHHHHHHH-HhhCHHHHHHHHHHHHcc
Q psy9209 179 -RMLTALGEAFE-KQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 179 -~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~ 207 (349)
.....-|..+. ..++|.+|...|-++++.
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 34456688888 899999999999988754
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.0012 Score=59.44 Aligned_cols=119 Identities=8% Similarity=0.083 Sum_probs=88.4
Q ss_pred hcCC-HHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhh--------Ccc----------cHH
Q psy9209 51 KANN-LDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKL--------NPN----------YLG 111 (349)
Q Consensus 51 ~~~~-~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~----------~~~ 111 (349)
..|+ ++.|+..+++....+|.....+ ....++.......+--+|+....+.++. .+. ...
T Consensus 260 ~t~~~~~~a~~~le~L~~~~p~~~~~~-~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 338 (754)
T 4gns_B 260 ITPSLVDFTIDYLKGLTKKDPIHDIYY-KTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSD 338 (754)
T ss_dssp TCGGGHHHHHHHHHHHHHHCGGGHHHH-HHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhhCCchhHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchH
Confidence 3455 5889999999999888764332 2222222222223456677777777642 122 223
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQA 170 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 170 (349)
.+...+..+...|+++-|+++.++++...|.....|..|+.+|..+|+|+.|+-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45666888889999999999999999999999999999999999999999999888776
No 236
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=97.56 E-value=0.029 Score=49.81 Aligned_cols=242 Identities=8% Similarity=-0.052 Sum_probs=139.3
Q ss_pred HHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCc
Q psy9209 62 AQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINN 141 (349)
Q Consensus 62 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 141 (349)
+...+...|+.+....+-......+.+.+++..-+.++.. .|.+..............|+..+|.....++.....
T Consensus 58 v~~Fl~~~~~~p~~~~Lr~~~l~~l~~~~~w~~~l~~~~~----~p~~~~~~c~~~~A~~~~G~~~~a~~~~~~lW~~~~ 133 (618)
T 1qsa_A 58 VTNFVRANPTLPPARTLQSRFVNELARREDWRGLLAFSPE----KPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK 133 (618)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHCCS----CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHCCCChhHHHHHHHHHHHHHhCCCHHHHHHhccC----CCCCHHHHHHHHHHHHHcCChhHHHHHHHHHHhCCC
Confidence 3444555666665543333332333334677766665543 377777777788888888988777776666544321
Q ss_pred cc------------------HHHHHHHHHHHHHhCCHHHHHHHHHH-------------HHhcCCCChH-----------
Q psy9209 142 LD------------------YRAWYGLGQTYEILRLPYYGLYYYKQ-------------AHMVRPNDPR----------- 179 (349)
Q Consensus 142 ~~------------------~~~~~~l~~~~~~~~~~~~A~~~~~~-------------~~~~~~~~~~----------- 179 (349)
.. ...+..........|+...|...... ++..+|....
T Consensus 134 ~~p~~c~~l~~~~~~~g~lt~~~~~~R~~~al~~~~~~~a~~l~~~l~~~~~~~a~~~~al~~~p~~~~~~~~~~~~~~~ 213 (618)
T 1qsa_A 134 SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDF 213 (618)
T ss_dssp CCCTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCHHHHHHHHHTCCGGGHHHHHHHHHHHHCGGGHHHHHHHSCCCHH
T ss_pred CCcHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhChHhHHHHHhccCCChh
Confidence 11 11222223334444554444333221 1111332221
Q ss_pred --HHHHHHHHHHHhhCHHHHHHHHHHHHccccccH----HHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcc
Q psy9209 180 --MLTALGEAFEKQEKISEAMKCYNKSRAIGDADG----KALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTC 253 (349)
Q Consensus 180 --~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 253 (349)
.....+.......+.+.|...+.+.....+-+. ..+..++.-....+...++...+.+......+
T Consensus 214 ~~~~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~--------- 284 (618)
T 1qsa_A 214 TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQS--------- 284 (618)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCC---------
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCC---------
Confidence 122334444556688888888877654322221 22333444444445356777777765543332
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCchhHHHHhhh
Q psy9209 254 GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQPMECAVV 317 (349)
Q Consensus 254 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 317 (349)
.. ....++....+.|+++.|..+|+.+-..........+++|..+...|+.++|...|+++..
T Consensus 285 ~~-~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 285 TS-LIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HH-HHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hH-HHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 22 2333444456779999999999887665456678889999999999999999999999875
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.0026 Score=57.41 Aligned_cols=115 Identities=10% Similarity=-0.052 Sum_probs=86.2
Q ss_pred Ccc-hHHHHHHHHHHHhhCcccHHHHHHHHHHHH--hc-CChHHHHHHHHHHHHh--------C----------cccHHH
Q psy9209 89 DES-SSQAVLYFQRALKLNPNYLGVWTLLGHEYM--EM-KNTNAAIQCYRQAIEI--------N----------NLDYRA 146 (349)
Q Consensus 89 ~~~-~~~A~~~~~~~~~~~~~~~~~~~~la~~~~--~~-~~~~~A~~~~~~a~~~--------~----------~~~~~~ 146 (349)
.++ ++.|+..+++....+|.... ++..+.+.. .. .+--+|+..+.+.++. . |.....
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~L 339 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDL 339 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHH
Confidence 355 58899999999999987543 333232222 22 2334677777777642 1 112334
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy9209 147 WYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKS 204 (349)
Q Consensus 147 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 204 (349)
+..-+..+...|+++-|+++.++++...|.....|..|+.+|..+|+|+.|+-.++.+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 5556777888999999999999999999999999999999999999999999888876
No 238
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.045 Score=46.69 Aligned_cols=194 Identities=8% Similarity=-0.091 Sum_probs=121.2
Q ss_pred hCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcC-
Q psy9209 9 LNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQ- 87 (349)
Q Consensus 9 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~- 87 (349)
.|++.+|++.+....+.. ....+.... ..+...+...+...|+++...+.+.-..........+...+......+.
T Consensus 29 ~~~~~~a~e~ll~lEK~~-r~~~d~~s~--~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~ 105 (445)
T 4b4t_P 29 QNDCNSALDQLLVLEKKT-RQASDLASS--KEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLK 105 (445)
T ss_dssp HHHHHHHHHHHHHHHHHH-SSSCSTTTC--HHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHh-hhccchhhH--HHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 478889988875544322 222222222 2578888899999999998877766544433222222111111111110
Q ss_pred CCcchHHHHHHHHHHHhh----Cc-------ccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh----Cc--ccHHHHHHH
Q psy9209 88 PDESSSQAVLYFQRALKL----NP-------NYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI----NN--LDYRAWYGL 150 (349)
Q Consensus 88 ~~~~~~~A~~~~~~~~~~----~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~----~~--~~~~~~~~l 150 (349)
.....+. ......+.. .. ........++.++...|++.+|...+.....- .+ .-.+.+...
T Consensus 106 ~~~~~d~--~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q 183 (445)
T 4b4t_P 106 SSKSLDL--NTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQ 183 (445)
T ss_dssp HHCTTHH--HHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHH
T ss_pred cCCchhH--HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 0011111 111122211 11 12345578999999999999999999987642 11 125678888
Q ss_pred HHHHHHhCCHHHHHHHHHHHHh---cCCCCh----HHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 151 GQTYEILRLPYYGLYYYKQAHM---VRPNDP----RMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 151 ~~~~~~~~~~~~A~~~~~~~~~---~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
..++...+++..|...++++.. ..+..+ ..+...|.++...++|.+|-.+|..++..
T Consensus 184 ~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 184 MELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 9999999999999999998742 233333 45677899999999999999999998765
No 239
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.18 E-value=0.019 Score=53.13 Aligned_cols=100 Identities=11% Similarity=0.015 Sum_probs=59.1
Q ss_pred HHHHhcCCHHHHHH-HHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCC
Q psy9209 47 NHHLKANNLDTAYK-CAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKN 125 (349)
Q Consensus 47 ~~~~~~~~~~~A~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 125 (349)
......+++++|.. .+.. +. ++.. +..+...+...|.++.|++..+ ++... .......|+
T Consensus 607 ~~~~~~~~~~~a~~~~l~~-i~-~~~~------~~~~~~~l~~~~~~~~a~~~~~--------~~~~~---f~~~l~~~~ 667 (814)
T 3mkq_A 607 QTLTLRGEIEEAIENVLPN-VE-GKDS------LTKIARFLEGQEYYEEALNISP--------DQDQK---FELALKVGQ 667 (814)
T ss_dssp HHHHHTTCHHHHHHHTGGG-CC-CHHH------HHHHHHHHHHTTCHHHHHHHCC--------CHHHH---HHHHHHHTC
T ss_pred hHHHHhCCHHHHHHHHHhc-CC-chHH------HHHHHHHHHhCCChHHheecCC--------Ccchh---eehhhhcCC
Confidence 34456788888865 3311 11 0110 1222223333467777665442 12222 234567788
Q ss_pred hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 126 TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQA 170 (349)
Q Consensus 126 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 170 (349)
++.|.+..+. .++...|..+|..+...++++.|+.+|.++
T Consensus 668 ~~~A~~~~~~-----~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 668 LTLARDLLTD-----ESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHTT-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 8888877532 345678888888888888888888888876
No 240
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.17 E-value=0.013 Score=54.31 Aligned_cols=126 Identities=11% Similarity=0.014 Sum_probs=80.1
Q ss_pred CcchHHHHH-HHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHH
Q psy9209 89 DESSSQAVL-YFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYY 167 (349)
Q Consensus 89 ~~~~~~A~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 167 (349)
.+++++|.+ .+ ..-|+ ......+...+...|.++.|++..+ ++... .......|++++|.+..
T Consensus 612 ~~~~~~a~~~~l----~~i~~-~~~~~~~~~~l~~~~~~~~a~~~~~--------~~~~~---f~~~l~~~~~~~A~~~~ 675 (814)
T 3mkq_A 612 RGEIEEAIENVL----PNVEG-KDSLTKIARFLEGQEYYEEALNISP--------DQDQK---FELALKVGQLTLARDLL 675 (814)
T ss_dssp TTCHHHHHHHTG----GGCCC-HHHHHHHHHHHHHTTCHHHHHHHCC--------CHHHH---HHHHHHHTCHHHHHHHH
T ss_pred hCCHHHHHHHHH----hcCCc-hHHHHHHHHHHHhCCChHHheecCC--------Ccchh---eehhhhcCCHHHHHHHH
Confidence 378888765 33 11120 1223666677888899888887653 22222 23456789999998886
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc--------cccHHHHHHHHHHHHhcCcHHHHHHHH
Q psy9209 168 KQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIG--------DADGKALFKLAKLYDKLNETEAAADLF 235 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~ 235 (349)
+. .+++..|..+|..+.+.|+++.|+.+|.++-... ..+...+..++......|++..|...|
T Consensus 676 ~~-----~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~ 746 (814)
T 3mkq_A 676 TD-----ESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAY 746 (814)
T ss_dssp TT-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred Hh-----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHH
Confidence 43 3678899999999999999999999999874321 223333444444555555555554443
No 241
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=97.06 E-value=0.043 Score=38.94 Aligned_cols=116 Identities=12% Similarity=-0.015 Sum_probs=69.5
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQ 169 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 169 (349)
.+++.++-.-.- +-|..++....++.++.-.|+|..++-.+.+ -+...+.+.-+.||...+++..|+..++.
T Consensus 16 ~dYdt~~fLsa~---L~~~~~eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~ 87 (242)
T 3kae_A 16 RDYETAIFLAAC---LLPCKPEYRMLMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLES 87 (242)
T ss_dssp TCHHHHHHHHHH---HC----CTHHHHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccHHHHHHHH---HccCChHHHhhhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456655433222 2334445556677777788888877766532 23455666777788888888888888888
Q ss_pred HHhc-----------------CCCChH-HHHHHHHHHHHhhCHHHHHHHHHHHHccccccHH
Q psy9209 170 AHMV-----------------RPNDPR-MLTALGEAFEKQEKISEAMKCYNKSRAIGDADGK 213 (349)
Q Consensus 170 ~~~~-----------------~~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 213 (349)
.+.- +|.+.+ .+..+|.++.+.|+.++|+.++.......|-.+.
T Consensus 88 il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~ 149 (242)
T 3kae_A 88 ILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSP 149 (242)
T ss_dssp HHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccch
Confidence 8732 122222 3445666666777777777777666666664333
No 242
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.072 Score=38.51 Aligned_cols=100 Identities=16% Similarity=0.007 Sum_probs=53.0
Q ss_pred HHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHH
Q psy9209 155 EILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADL 234 (349)
Q Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 234 (349)
...|+++.|.+..+.. ++...|..+|......|+++-|..+|.++-.. ..+..+|...|+.+.-.+.
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~--------~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSF--------DKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH--------HHHHHHHHHHTCHHHHHHH
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH--------HHHHHHHHHhCCHHHHHHH
Confidence 3566666666665544 45566677777777777777777776665321 1233344445555443333
Q ss_pred HHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9209 235 FMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKC 281 (349)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 281 (349)
-+.+..... +.....++...|+++++++.|.+.
T Consensus 83 a~iA~~~g~--------------~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 83 QNIAQTRED--------------FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHTTC--------------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHCcc--------------HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 333322111 122234455667777777766554
No 243
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.095 Score=37.87 Aligned_cols=98 Identities=17% Similarity=0.120 Sum_probs=51.0
Q ss_pred HhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKC 200 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 200 (349)
...|+++.|.+..+.. ++...|..+|......|+++-|..+|.++-. +-.+..+|...|+.++-...
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTCHHHHHHH
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCCHHHHHHH
Confidence 4667777776665543 3456677777777777777777777766521 12233344445555443333
Q ss_pred HHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy9209 201 YNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFM 236 (349)
Q Consensus 201 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 236 (349)
-+.+..... +.....++..+|+++++++.|.
T Consensus 83 a~iA~~~g~-----~n~af~~~l~lGdv~~~i~lL~ 113 (177)
T 3mkq_B 83 QNIAQTRED-----FGSMLLNTFYNNSTKERSSIFA 113 (177)
T ss_dssp HHHHHHTTC-----HHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHCcc-----HHHHHHHHHHcCCHHHHHHHHH
Confidence 333322211 1112233445566666665553
No 244
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=96.72 E-value=0.38 Score=44.71 Aligned_cols=258 Identities=5% Similarity=-0.083 Sum_probs=135.0
Q ss_pred hCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhh-------chHHHHHHHHH
Q psy9209 9 LNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE-------TAEEAKSLLRS 81 (349)
Q Consensus 9 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~-------~~~~~~~~l~~ 81 (349)
.|+.++++..+.+.+ +.. ...+.....-+++.+|.++...+ .++...+...+..+. ......-....
T Consensus 387 ~g~~~~gl~~L~~yL---~~~-~s~~~~ik~GAllaLGli~ag~~--~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLG 460 (963)
T 4ady_A 387 KGNLLEGKKVMAPYL---PGS-RASSRFIKGGSLYGLGLIYAGFG--RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLG 460 (963)
T ss_dssp SSCTTTHHHHHTTTS---TTS-CCSCHHHHHHHHHHHHHHTTTTT--HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHhc---ccc-CCCcHHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHcCccccccccccHHHHHHHHHH
Confidence 455566665554433 110 02223334457778888776665 367777777765432 11122222334
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhhCcccH--HHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCC
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKLNPNYL--GVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRL 159 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 159 (349)
+|.++.-.++ +++.+.+...+..+.... .+-..+|.++.-.|+-+-...++..+.+...+...-...+|..+...|+
T Consensus 461 LGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~ 539 (963)
T 4ady_A 461 IGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGR 539 (963)
T ss_dssp HHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCC
Confidence 5666654443 567777777776443222 3446778888888887766666666665443333333445555567788
Q ss_pred HHHHHHHHHHHHhcCCCChH----HHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHH
Q psy9209 160 PYYGLYYYKQAHMVRPNDPR----MLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLF 235 (349)
Q Consensus 160 ~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 235 (349)
.+.+....+..... .++. +-..+|..|...|+...-..++..+..-..++..-...+|......|+.+.+...+
T Consensus 540 ~e~~~~li~~L~~~--~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~e~v~rlv 617 (963)
T 4ady_A 540 QELADDLITKMLAS--DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDYTTVPRIV 617 (963)
T ss_dssp GGGGHHHHHHHHHC--SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSCSSHHHHT
T ss_pred hHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHhhccCCHHHHHHHH
Confidence 87777776665543 2332 23356677778888655555776666543333332233333344455544333333
Q ss_pred HHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 236 MEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
..... ..+ ..-...+-..+|.+....++ .+++..+.+...
T Consensus 618 ~~L~~-~~d------~~VR~gAalALGli~aGn~~-~~aid~L~~L~~ 657 (963)
T 4ady_A 618 QLLSK-SHN------AHVRCGTAFALGIACAGKGL-QSAIDVLDPLTK 657 (963)
T ss_dssp TTGGG-CSC------HHHHHHHHHHHHHHTSSSCC-HHHHHHHHHHHT
T ss_pred HHHHh-cCC------HHHHHHHHHHHHHhccCCCc-HHHHHHHHHHcc
Confidence 22221 111 11112222333443333343 678888887754
No 245
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.69 E-value=0.074 Score=41.18 Aligned_cols=58 Identities=12% Similarity=-0.102 Sum_probs=32.8
Q ss_pred HhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Q psy9209 121 MEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDP 178 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (349)
.+.|+.++|+......++.+|.+......+..+++-.|+++.|.+.++.+.+++|...
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 3445555555555555555555555555555555555555555555555555555543
No 246
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.69 E-value=0.092 Score=37.29 Aligned_cols=120 Identities=16% Similarity=0.061 Sum_probs=81.2
Q ss_pred HhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHH
Q psy9209 50 LKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAA 129 (349)
Q Consensus 50 ~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 129 (349)
++-.+++.++-.-.-.....|. +..+..+...+ .|.+..++-.+.. -+...+.+..+.||...++|..|
T Consensus 13 ~kY~dYdt~~fLsa~L~~~~~e----Y~lL~~I~Lyy--ngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA 81 (242)
T 3kae_A 13 IRYRDYETAIFLAACLLPCKPE----YRMLMSIVLYL--NGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKA 81 (242)
T ss_dssp HHTTCHHHHHHHHHHHC----C----THHHHHHHHHH--TTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHH
T ss_pred hhcccccHHHHHHHHHccCChH----HHhhhhhhhhh--cchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHH
Confidence 3456777765443333333332 22333333333 5899988876533 34567778889999999999999
Q ss_pred HHHHHHHHH--h--C-------------cccHH-HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHH
Q psy9209 130 IQCYRQAIE--I--N-------------NLDYR-AWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRM 180 (349)
Q Consensus 130 ~~~~~~a~~--~--~-------------~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (349)
+..+++.++ . + |.+.+ .+..+|.++...|+-++|+.++.......|-.+.+
T Consensus 82 ~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 82 IKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 999999994 2 2 23333 45678999999999999999999999887765433
No 247
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.69 E-value=0.036 Score=51.61 Aligned_cols=96 Identities=7% Similarity=-0.052 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHcc----ccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchH
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAI----GDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGF 255 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 255 (349)
.+..+-..|.+.|+.++|...|....+. -.-+...|..+...+.+.|+.++|.+.|+++....-.. +.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P--------Dv 200 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP--------DL 200 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC--------CH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC--------cH
Confidence 3444445555555555555555443221 11134445555555555555555555555554322110 24
Q ss_pred HHHHHHHHHHHHhCCH-HHHHHHHHHHHc
Q psy9209 256 FAFKYLANHHLKANNL-DTAYKCAQKCLQ 283 (349)
Q Consensus 256 ~~~~~l~~~~~~~g~~-~~A~~~~~~a~~ 283 (349)
..|..+...+.+.|+. ++|.++++++.+
T Consensus 201 vTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 201 LSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 4445555555555542 444555555443
No 248
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.69 E-value=0.13 Score=39.91 Aligned_cols=60 Identities=13% Similarity=0.006 Sum_probs=54.9
Q ss_pred cCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHH
Q psy9209 86 RQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYR 145 (349)
Q Consensus 86 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 145 (349)
..+.|+.++|++.....++.+|.+......+..++.-.|+++.|.+-++.+.+++|....
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 456799999999999999999999999999999999999999999999999999998643
No 249
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.66 E-value=0.043 Score=51.09 Aligned_cols=98 Identities=7% Similarity=-0.078 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHh----CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC-CCChHHHHHH
Q psy9209 110 LGVWTLLGHEYMEMKNTNAAIQCYRQAIEI----NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR-PNDPRMLTAL 184 (349)
Q Consensus 110 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l 184 (349)
...+..+-..|.+.|+.++|..+|.++.+. -.-+...|..+...|.+.|+.++|.+.|+++.+.. .-+...|..+
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 346788889999999999999999876542 23367889999999999999999999999998752 3356778888
Q ss_pred HHHHHHhhC-HHHHHHHHHHHHcc
Q psy9209 185 GEAFEKQEK-ISEAMKCYNKSRAI 207 (349)
Q Consensus 185 ~~~~~~~~~-~~~A~~~~~~a~~~ 207 (349)
-.++.+.|+ .++|..+++++...
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHc
Confidence 888999988 47888999998876
No 250
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.015 Score=49.32 Aligned_cols=98 Identities=9% Similarity=-0.004 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHhhCHHHHHHHHHHHHccc--cccH----HH
Q psy9209 144 YRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN---DPRMLTALGEAFEKQEKISEAMKCYNKSRAIG--DADG----KA 214 (349)
Q Consensus 144 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~~----~~ 214 (349)
..++..+|..|...|+++.|.+.|.++...... ..+.+.....++...+++..+...+.++.... ..++ ..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 345667777777777777777777776654322 23556666666777777777777777765441 1112 23
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhc
Q psy9209 215 LFKLAKLYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 215 ~~~l~~~~~~~~~~~~A~~~~~~~~~~ 241 (349)
....|.++...++|.+|...|-.++..
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 334455566666777776666666543
No 251
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=96.44 E-value=0.23 Score=48.05 Aligned_cols=145 Identities=16% Similarity=0.052 Sum_probs=94.9
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC--------------------
Q psy9209 115 LLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR-------------------- 174 (349)
Q Consensus 115 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-------------------- 174 (349)
.+...+...+.++-+.+ .+...|.++...+.+|.++...|++++|..+|+++-..-
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 34445566666665544 334456666677888999999999999999988764320
Q ss_pred ---CCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccc-cH----HHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccC
Q psy9209 175 ---PNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDA-DG----KALFKLAKLYDKLNETEAAADLFMEFVSKLDTFA 246 (349)
Q Consensus 175 ---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 246 (349)
...+..|..+..++.+.|.++.++++-+.|++..+. +. ..|.++-..+...|+|++|...+...-...
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~---- 968 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTP---- 968 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSS----
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHH----
Confidence 112245666777888888899999998888876432 22 256777788888899999877765432211
Q ss_pred CCCCCcchHHHHHHHHHHHHHhCCHHH
Q psy9209 247 APPDKTCGFFAFKYLANHHLKANNLDT 273 (349)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~g~~~~ 273 (349)
.....+..|....+..|..+.
T Consensus 969 ------~r~~cLr~LV~~lce~~~~~~ 989 (1139)
T 4fhn_B 969 ------LKKSCLLDFVNQLTKQGKINQ 989 (1139)
T ss_dssp ------SCHHHHHHHHHHHHHHCCHHH
T ss_pred ------HHHHHHHHHHHHHHhCCChhh
Confidence 135556666666666655443
No 252
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.43 E-value=0.092 Score=43.90 Aligned_cols=112 Identities=11% Similarity=-0.115 Sum_probs=76.1
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHH-HHHHHHHHhcCCCChHHHHHHHHHHHHhhCHH
Q psy9209 117 GHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYG-LYYYKQAHMVRPNDPRMLTALGEAFEKQEKIS 195 (349)
Q Consensus 117 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 195 (349)
|......|+.+.|...+.+++.+.....-. ... ...+-.+ ...+++.. ..+...++..+...|++.
T Consensus 122 ~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~--~~~-----~~~w~~~~r~~l~~~~------~~a~~~~~~~~l~~g~~~ 188 (388)
T 2ff4_A 122 GVHAAAAGRFEQASRHLSAALREWRGPVLD--DLR-----DFQFVEPFATALVEDK------VLAHTAKAEAEIACGRAS 188 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCSSTTG--GGT-----TSTTHHHHHHHHHHHH------HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhcCCCCCC--CCC-----chhHHHHHHHHHHHHH------HHHHHHHHHHHHHCCCHH
Confidence 333445678888888888888864321100 000 0111111 11111111 134556778888999999
Q ss_pred HHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q psy9209 196 EAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 196 ~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 241 (349)
+++..+..++..+|-+-.++..+..++...|+..+|+..|+++...
T Consensus 189 ~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~ 234 (388)
T 2ff4_A 189 AVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTT 234 (388)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887653
No 253
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.40 E-value=0.039 Score=47.49 Aligned_cols=75 Identities=20% Similarity=0.167 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 114 TLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 114 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
..+|.+......+..|..+|.+|..+.|.+...+..||.+....|+.-+|+-+|-+++......+.+..++...+
T Consensus 156 ~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 156 VHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 445555555555555555555555555555555555555555555555555555555555444455555554444
No 254
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.38 E-value=0.073 Score=44.50 Aligned_cols=105 Identities=11% Similarity=-0.030 Sum_probs=66.9
Q ss_pred CcchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHH-HHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHH
Q psy9209 89 DESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAA-IQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYY 167 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 167 (349)
.|+.+.|...+.+++.+.....-. .+ ....+-.+ ...+++ ....+...++..+...|++.+++..+
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~-----~~--~~~~w~~~~r~~l~~------~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLD-----DL--RDFQFVEPFATALVE------DKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTG-----GG--TTSTTHHHHHHHHHH------HHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCC-----CC--CchhHHHHHHHHHHH------HHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 467888888888888775321100 00 00111111 111111 12234455677777888888888888
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHc
Q psy9209 168 KQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRA 206 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 206 (349)
..++..+|-+..++..+..++...|+..+|+..|+++..
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 888888888888888888888888888888888877654
No 255
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.35 E-value=0.039 Score=47.53 Aligned_cols=66 Identities=20% Similarity=0.145 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHHHhhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q psy9209 90 ESSSQAVLYFQRALKLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYE 155 (349)
Q Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 155 (349)
..+..|..+|.+|..+.|.++..++.+|.+....|+.-+|+-+|-+++......+.+..++...+.
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 445566666666666666666666666666666666666666666665554445555555555444
No 256
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.43 Score=40.64 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHcc----cc--ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCc
Q psy9209 179 RMLTALGEAFEKQEKISEAMKCYNKSRAI----GD--ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKT 252 (349)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 252 (349)
.....++.++...|++.+|...+.....- .+ .-.+.+.....++...+++..|...++++....... .....
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~--~~~~~ 215 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN--PKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--SCCHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--CCcHH
Confidence 45577899999999999999999887532 11 125677788889999999999999999875322110 11122
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 253 CGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 253 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
.....+...|.++...++|.+|..+|..+...
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34567778899999999999999999998764
No 257
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.15 Score=43.75 Aligned_cols=124 Identities=11% Similarity=0.022 Sum_probs=58.9
Q ss_pred cCCCcchHHHHHHHHHHHh-----------hCcccHHHHHHHHHHHHhcCChHHHHH----------HHHHHHHh-----
Q psy9209 86 RQPDESSSQAVLYFQRALK-----------LNPNYLGVWTLLGHEYMEMKNTNAAIQ----------CYRQAIEI----- 139 (349)
Q Consensus 86 ~~~~~~~~~A~~~~~~~~~-----------~~~~~~~~~~~la~~~~~~~~~~~A~~----------~~~~a~~~----- 139 (349)
+...+++++|.++-...+. +++-...+|+..+.++...|+...... .+..++..
T Consensus 146 L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~ 225 (523)
T 4b4t_S 146 LWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH 225 (523)
T ss_dssp ---------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc
Confidence 4456888888887765541 123345677777888877777655322 22222221
Q ss_pred Cc-ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC-------hHHHHHHHHHHHHhhCHHHHHHHHHHHHcccccc
Q psy9209 140 NN-LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPND-------PRMLTALGEAFEKQEKISEAMKCYNKSRAIGDAD 211 (349)
Q Consensus 140 ~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 211 (349)
++ .....+..+-+.|...+.++.|..+..++. .|.. ...++.+|.++..+++|.+|..++..|+...|.+
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 22 235677888899999999999999999985 4432 2567788999999999999999999999987653
No 258
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.036 Score=47.10 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=79.7
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCc---ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCCh----H
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINN---LDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR--PNDP----R 179 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~----~ 179 (349)
...++..+|..|...|+++.|.+.|.++..... ...+.+..+..++...+++..+..++.++.... ..++ .
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 345678999999999999999999999887532 347788899999999999999999999987652 2233 2
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 180 MLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 180 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
.....|.++...++|.+|...|-.++..
T Consensus 210 lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 210 YKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 3445677788899999999999888765
No 259
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.62 E-value=0.09 Score=45.07 Aligned_cols=130 Identities=9% Similarity=0.025 Sum_probs=58.8
Q ss_pred HHHhCCHHHHHHHHHHHHh---c--------CCCChHHHHHHHHHHHHhhCHHHHH----------HHHHHHHc-----c
Q psy9209 154 YEILRLPYYGLYYYKQAHM---V--------RPNDPRMLTALGEAFEKQEKISEAM----------KCYNKSRA-----I 207 (349)
Q Consensus 154 ~~~~~~~~~A~~~~~~~~~---~--------~~~~~~~~~~l~~~~~~~~~~~~A~----------~~~~~a~~-----~ 207 (349)
+...+++++|..+-...+. + ++-...+|+.++.++...|+..... ..+-.++. .
T Consensus 146 L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~ 225 (523)
T 4b4t_S 146 LWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH 225 (523)
T ss_dssp ---------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc
Confidence 3456677777666554441 1 2334466777777777776655422 12222221 1
Q ss_pred cc-ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccC
Q psy9209 208 GD-ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHEE 286 (349)
Q Consensus 208 ~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 286 (349)
++ .....+..+-+.|...+.+++|..+..++. .|.. ..........++.+|.++.-+++|.+|.+++..|+...|
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~--~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap 301 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHT--DVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAP 301 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTT--TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcc--cCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 22 235567778888999999999999988874 4431 112233567788899999999999999999999998766
Q ss_pred C
Q psy9209 287 T 287 (349)
Q Consensus 287 ~ 287 (349)
.
T Consensus 302 ~ 302 (523)
T 4b4t_S 302 H 302 (523)
T ss_dssp C
T ss_pred c
Confidence 3
No 260
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=95.45 E-value=1.3 Score=39.39 Aligned_cols=189 Identities=8% Similarity=-0.082 Sum_probs=114.1
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCcccH----HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhh
Q psy9209 117 GHEYMEMKNTNAAIQCYRQAIEINNLDY----RAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQE 192 (349)
Q Consensus 117 a~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 192 (349)
+.......+.+.|...+.+.....+-+. ..+..++.-....+...++...+.+.....+++. ..-..+......|
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~r~Alr~~ 299 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTS-LIERRVRMALGTG 299 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHH-HHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChH-HHHHHHHHHHHCC
Confidence 4444455577888888877654322221 2222333333344435677777777665444333 3333444455679
Q ss_pred CHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhccccc---------CC---C---CCCc--c--
Q psy9209 193 KISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTF---------AA---P---PDKT--C-- 253 (349)
Q Consensus 193 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------~~---~---~~~~--~-- 253 (349)
+++.|..++..+-......+...+-+|..+...|+.++|...|+++.... +. +. . ...+ .
T Consensus 300 d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~~-~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~ 378 (618)
T 1qsa_A 300 DRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQR-GFYPMVAAQRIGEEYELKIDKAPQNVDSA 378 (618)
T ss_dssp CHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC-SHHHHHHHHHTTCCCCCCCCCCCSCCCCH
T ss_pred CHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcCC-ChHHHHHHHHcCCCCCCCCCCCChhHHhh
Confidence 99999999987665545567778889999999999999999998876531 10 00 0 0000 0
Q ss_pred -hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCch
Q psy9209 254 -GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSS 309 (349)
Q Consensus 254 -~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 309 (349)
....-...+..+...|....|...+.......+ +.-...++.+....|.++.++
T Consensus 379 ~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~~~--~~~~~~la~~a~~~~~~~~~v 433 (618)
T 1qsa_A 379 LTQGPEMARVRELMYWNLDNTARSEWANLVKSKS--KTEQAQLARYAFNNQWWDLSV 433 (618)
T ss_dssp HHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC--HHHHHHHHHHHHHTTCHHHHH
T ss_pred hccChHHHHHHHHHHCCChhhHHHHHHHHHhcCC--HHHHHHHHHHHHHCCChHHHH
Confidence 112234567788899999999998888776432 233345566655566554444
No 261
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=95.36 E-value=1.4 Score=41.16 Aligned_cols=185 Identities=11% Similarity=-0.017 Sum_probs=97.6
Q ss_pred CcchHHHHHHHHHHHhhC-ccc----HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCc------cc----HHHHHHHHHH
Q psy9209 89 DESSSQAVLYFQRALKLN-PNY----LGVWTLLGHEYMEMKNTNAAIQCYRQAIEINN------LD----YRAWYGLGQT 153 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~-~~~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~----~~~~~~l~~~ 153 (349)
.|+.++++..+.+.+... ..+ ..+.+.+|.++...+ ++++..+...+..+. +. ..+-..||.+
T Consensus 387 ~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~--~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla 464 (963)
T 4ady_A 387 KGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFG--RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLA 464 (963)
T ss_dssp SSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTT--HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHH
Confidence 366677777776655421 111 234455555555444 467777777765432 01 1345567776
Q ss_pred HHHhCCHHHHHHHHHHHHhcCCCCh--HHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHH
Q psy9209 154 YEILRLPYYGLYYYKQAHMVRPNDP--RMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAA 231 (349)
Q Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 231 (349)
+...++ +++...+...+..+.... .+-..+|.++...|+-+-...++..+.+...+...-...+|......|+.+.+
T Consensus 465 ~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~ 543 (963)
T 4ady_A 465 AMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELA 543 (963)
T ss_dssp STTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGG
T ss_pred hcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHH
Confidence 665554 456666666665332111 23445677777777766555665555544333222223344445566776666
Q ss_pred HHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 232 ADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
....+........ .....+-..+|..|...|+...-...+..+..
T Consensus 544 ~~li~~L~~~~dp-------~vRygaa~alglAyaGTGn~~aIq~LL~~~~~ 588 (963)
T 4ady_A 544 DDLITKMLASDES-------LLRYGGAFTIALAYAGTGNNSAVKRLLHVAVS 588 (963)
T ss_dssp HHHHHHHHHCSCH-------HHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcc
Confidence 6555554432111 11223334566677777876544446555554
No 262
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=95.21 E-value=0.67 Score=44.86 Aligned_cols=101 Identities=13% Similarity=0.017 Sum_probs=78.5
Q ss_pred hhCcccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh---C--------------------cccHHHHHHHHHHHHHhCCH
Q psy9209 104 KLNPNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI---N--------------------NLDYRAWYGLGQTYEILRLP 160 (349)
Q Consensus 104 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~--------------------~~~~~~~~~l~~~~~~~~~~ 160 (349)
...|.++...+.+|.++...|++++|..+|+++-.- . ...+..|..+..++...+.+
T Consensus 836 ~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~ 915 (1139)
T 4fhn_B 836 GWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAY 915 (1139)
T ss_dssp HHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCC
T ss_pred hhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCH
Confidence 345667777799999999999999999999987321 0 01234567788899999999
Q ss_pred HHHHHHHHHHHhcCCCCh-----HHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy9209 161 YYGLYYYKQAHMVRPNDP-----RMLTALGEAFEKQEKISEAMKCYNKS 204 (349)
Q Consensus 161 ~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a 204 (349)
+.+++..+.|++..+.+. ..|.++-..+...|+|++|...+...
T Consensus 916 ~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 916 IDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 999999999998754332 25777788889999999998877554
No 263
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=92.12 E-value=4 Score=32.98 Aligned_cols=96 Identities=14% Similarity=0.028 Sum_probs=52.5
Q ss_pred cccHHHHHHHHHH-HHhcCcHHHHHHHHHHHHhcc----cccCC--C-------CCCcchHH-HHHHHHHHHHHhCC---
Q psy9209 209 DADGKALFKLAKL-YDKLNETEAAADLFMEFVSKL----DTFAA--P-------PDKTCGFF-AFKYLANHHLKANN--- 270 (349)
Q Consensus 209 ~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~~~~~~----~~~~~--~-------~~~~~~~~-~~~~l~~~~~~~g~--- 270 (349)
|.....+...+.+ |...++...|...+....+.. |.... + ...+..+. -+..+...-++.+.
T Consensus 183 ~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl~lLllt~q~~~~~l 262 (336)
T 3lpz_A 183 SHTAPLYCARAVLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFISMLLLSVQKGSPDL 262 (336)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHHHHHHHHHHSCCHHH
T ss_pred CccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhcCCCccccccccCCcccccCCCCchHHHHHHHHHHHhcCCHHH
Confidence 4455555555544 678899999988776655432 32000 0 00111221 12233334445554
Q ss_pred HHHHHHHHHHHHcccC-ChHHHHHHHHHHHHHcCC
Q psy9209 271 LDTAYKCAQKCLQHEE-TAEEAKSLLRSIAQKRQP 304 (349)
Q Consensus 271 ~~~A~~~~~~a~~~~~-~~~~~~~~l~~~~~~~~~ 304 (349)
|..-...|+..++.+| ........+|.+|.....
T Consensus 263 F~~L~~~Y~~~l~rd~~~~~~~L~~IG~~YFgi~~ 297 (336)
T 3lpz_A 263 FRQLKSKYEANLNELNGIWDTALELIAEMYFGIQR 297 (336)
T ss_dssp HHHHHHHTHHHHHTTTTTTHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCCC
Confidence 3333445555566666 778888889999986643
No 264
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=89.13 E-value=7.5 Score=31.12 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=22.0
Q ss_pred cccHHHHHHHHH-HHHhcCcHHHHHHHHHHHHhc
Q psy9209 209 DADGKALFKLAK-LYDKLNETEAAADLFMEFVSK 241 (349)
Q Consensus 209 ~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~~~~~ 241 (349)
|...+.+...+. .|...|+...|...+....+.
T Consensus 184 ~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~~ 217 (312)
T 2wpv_A 184 DSTVAEFFSRLVFNYLFISNISFAHESKDIFLER 217 (312)
T ss_dssp HHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 344555544444 467889999999988876544
No 265
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.27 E-value=11 Score=35.73 Aligned_cols=90 Identities=11% Similarity=0.032 Sum_probs=66.7
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc-c-c------------------
Q psy9209 150 LGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI-G-D------------------ 209 (349)
Q Consensus 150 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~-~------------------ 209 (349)
+...+...|.++-+ .+.+..-|.++..-+.+|.++...|++++|..+|+++-.- . +
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 44555666766644 3455667788877889999999999999999999987532 0 0
Q ss_pred ---ccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q psy9209 210 ---ADGKALFKLAKLYDKLNETEAAADLFMEFVSKLD 243 (349)
Q Consensus 210 ---~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 243 (349)
.....|..+..++...+-++-++...+.|+....
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~ 928 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 928 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcc
Confidence 0123667788888999999999999999997543
No 266
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=86.27 E-value=1.5e-06 Score=72.45 Aligned_cols=193 Identities=18% Similarity=0.071 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcccHHHHHHHHHH
Q psy9209 40 FAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPNYLGVWTLLGHE 119 (349)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 119 (349)
.+|..+|.+.+..+...+|++.|-++- +|.+ +..+.....+.|.+++-+.+++-+-+... .+.+=..+..+
T Consensus 55 ~VWs~LgkAqL~~~~v~eAIdsyIkA~--Dps~------y~eVi~~A~~~~~~edLv~yL~MaRk~~k-e~~IDteLi~a 125 (624)
T 3lvg_A 55 AVWSQLAKAQLQKGMVKEAIDSYIKAD--DPSS------YMEVVQAANTSGNWEELVKYLQMARKKAR-ESYVETELIFA 125 (624)
T ss_dssp CCSSSHHHHTTTSSSCTTTTTSSCCCS--CCCS------SSHHHHHTTTSSCCTTHHHHHHTTSTTCC-STTTTHHHHHH
T ss_pred cHHHHHHHHHHccCchHHHHHHHHhCC--ChHH------HHHHHHHHHhCCCHHHHHHHHHHHHHHhc-ccccHHHHHHH
Confidence 469999999999999999998887653 4443 12222334456788887777776654321 22222334444
Q ss_pred HHhcCC----------------------------hHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy9209 120 YMEMKN----------------------------TNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAH 171 (349)
Q Consensus 120 ~~~~~~----------------------------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 171 (349)
|.+.++ |+.|.-+|.. ..-|..|+.++..+|+|..|++.-+++
T Consensus 126 yAk~~rL~elEefl~~~N~A~iq~VGDrcf~e~lYeAAKilys~--------isN~akLAstLV~L~~yq~AVdaArKA- 196 (624)
T 3lvg_A 126 LAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNN--------VSNFGRLASTLVHLGEYQAAVDGARKA- 196 (624)
T ss_dssp HHTSCSSSTTTSTTSCCSSSCTHHHHHHHHHSCCSTTSSTTGGG--------SCCCTTTSSSSSSCSGGGSSTTTTTTC-
T ss_pred HHhhCcHHHHHHHHcCCCcccHHHHHHHHHHccCHHHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 444444 4333333321 111334555666666666666555443
Q ss_pred hcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCC
Q psy9209 172 MVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDK 251 (349)
Q Consensus 172 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 251 (349)
+++.+|-....+....+.+.-|-.+--..+-... . +-.+...|...|.+++-+..++..+.+...
T Consensus 197 ----ns~ktWKeV~~ACvd~~EfrLAqicGLniIvhad-e---L~elv~~YE~~G~f~ELIsLlEaglglErA------- 261 (624)
T 3lvg_A 197 ----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHAD-E---LEELINYYQDRGYFEELITMLEAALGLERA------- 261 (624)
T ss_dssp ----CSSCSHHHHTHHHHHSCTTTTTTHHHHHHHCCSS-C---CSGGGSSSSTTCCCTTSTTTHHHHTTSTTC-------
T ss_pred ----CChhHHHHHHHHHhCchHHHHHHHhcchhcccHH-H---HHHHHHHHHhCCCHHHHHHHHHHHhCCCch-------
Confidence 4455565555555555555444444333332111 0 112233344555555555555555544433
Q ss_pred cchHHHHHHHHHHHHH
Q psy9209 252 TCGFFAFKYLANHHLK 267 (349)
Q Consensus 252 ~~~~~~~~~l~~~~~~ 267 (349)
+...+..||.+|.+
T Consensus 262 --HmGmFTELaILYsK 275 (624)
T 3lvg_A 262 --HMGMFTELAILYSK 275 (624)
T ss_dssp --CHHHHHHHHHHHHS
T ss_pred --hHHHHHHHHHHHHh
Confidence 44455555554443
No 267
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.80 E-value=16 Score=34.63 Aligned_cols=88 Identities=18% Similarity=0.096 Sum_probs=65.2
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-CCC------------------
Q psy9209 116 LGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV-RPN------------------ 176 (349)
Q Consensus 116 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~------------------ 176 (349)
+...+...|.++-|.+ .+..-|.++..-+.+|.++...|++++|..+|+++-.- ...
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 4556666777765443 44566777777789999999999999999999987532 110
Q ss_pred ----ChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 177 ----DPRMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 177 ----~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
....|.....++...+-++-++.+.+.|++.
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~ 926 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADAS 926 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Confidence 1135667788888889999999999999875
No 268
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=82.81 E-value=2.8 Score=25.06 Aligned_cols=34 Identities=6% Similarity=0.032 Sum_probs=27.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHH
Q psy9209 42 FKYLANHHLKANNLDTAYKCAQKCLQHEETAEEA 75 (349)
Q Consensus 42 ~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~ 75 (349)
-..+|..+...|++++|..+|-+|+...|.....
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 3568999999999999999999998887776554
No 269
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=80.22 E-value=5.5e-05 Score=63.38 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=66.4
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAF 188 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (349)
.+.+|..+|..+...++..+|++.|-++ +++..+.....+..+.|++++=+.++..+.+. -..+.+-..+..+|
T Consensus 53 ~p~VWs~LgkAqL~~~~v~eAIdsyIkA-----~Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~-~ke~~IDteLi~ay 126 (624)
T 3lvg_A 53 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKK-ARESYVETELIFAL 126 (624)
T ss_dssp CCCCSSSHHHHTTTSSSCTTTTTSSCCC-----SCCCSSSHHHHHTTTSSCCTTHHHHHHTTSTT-CCSTTTTHHHHHHH
T ss_pred CccHHHHHHHHHHccCchHHHHHHHHhC-----CChHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-hcccccHHHHHHHH
Confidence 4667888888888888888888777553 23333445555566777888777777766554 33444445566666
Q ss_pred HHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHH
Q psy9209 189 EKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLF 235 (349)
Q Consensus 189 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 235 (349)
.+.++..+-.+++ ..|+. .-....|.-++..|.|+.|.-.|
T Consensus 127 Ak~~rL~elEefl-----~~~N~-A~iq~VGDrcf~e~lYeAAKily 167 (624)
T 3lvg_A 127 AKTNRLAELEEFI-----NGPNN-AHIQQVGDRCYDEKMYDAAKLLY 167 (624)
T ss_dssp HTSCSSSTTTSTT-----SCCSS-SCTHHHHHHHHHSCCSTTSSTTG
T ss_pred HhhCcHHHHHHHH-----cCCCc-ccHHHHHHHHHHccCHHHHHHHH
Confidence 6666644322211 12222 12234555566666666555444
No 270
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=79.26 E-value=4.5 Score=25.58 Aligned_cols=34 Identities=6% Similarity=0.032 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhhchHHH
Q psy9209 42 FKYLANHHLKANNLDTAYKCAQKCLQHEETAEEA 75 (349)
Q Consensus 42 ~~~l~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~ 75 (349)
-..+|..+...|+++.|+.+|-+|+...|.....
T Consensus 23 eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~L 56 (95)
T 1om2_A 23 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 56 (95)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 4568999999999999999999999888776554
No 271
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=77.15 E-value=7.8 Score=23.13 Aligned_cols=36 Identities=6% Similarity=0.013 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHH
Q psy9209 258 FKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKS 293 (349)
Q Consensus 258 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 293 (349)
-..+|..+...|++++|..+|-+|+...|.-.+...
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 355899999999999999999999998877655443
No 272
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=72.36 E-value=18 Score=30.72 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=51.8
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHhccc--ccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc-cCC
Q psy9209 216 FKLAKLYDKLNETEAAADLFMEFVSKLD--TFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH-EET 287 (349)
Q Consensus 216 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~-~~~ 287 (349)
..+-.+|.+.|+..-+...++..-...+ .. ...........++.+|.++...++|.+|.+++..|+.. .|.
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~-~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHF-NEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCG-GGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcCh-hhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 3456788999999888888865543321 10 01122346778899999999999999999999999988 553
No 273
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=71.42 E-value=39 Score=27.33 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=16.2
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHH
Q psy9209 109 YLGVWTLLGHEYMEMKNTNAAIQCY 133 (349)
Q Consensus 109 ~~~~~~~la~~~~~~~~~~~A~~~~ 133 (349)
++..+..+|..|.+.+++.+|..+|
T Consensus 135 dp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 135 DPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHccCCHHHHHHHH
Confidence 4566666666666666666666665
No 274
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=70.30 E-value=30 Score=25.54 Aligned_cols=48 Identities=2% Similarity=-0.112 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy9209 126 TNAAIQCYRQAIEI--NNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV 173 (349)
Q Consensus 126 ~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 173 (349)
..++..+|.-+... ....+..|...|..+...|++.+|..+|+.+++.
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~ 144 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 44455555544432 3334444555555555555555555555555554
No 275
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=70.00 E-value=10 Score=23.72 Aligned_cols=22 Identities=14% Similarity=-0.026 Sum_probs=19.7
Q ss_pred hhhhHHhhCcHHHHHHHHHHHH
Q psy9209 2 RNKLYDKLNETEAAADLFMEFV 23 (349)
Q Consensus 2 ~a~~~~~~g~~~~A~~~~~~~~ 23 (349)
||+.+.+.|.|++||.+.+++.
T Consensus 21 rAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 21 RADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHH
Confidence 5788899999999999998887
No 276
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=69.77 E-value=12 Score=23.61 Aligned_cols=37 Identities=5% Similarity=0.029 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHH
Q psy9209 258 FKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSL 294 (349)
Q Consensus 258 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 294 (349)
-..+|..+...|+++.|+.+|-+|+...|.-......
T Consensus 23 eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i 59 (95)
T 1om2_A 23 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQV 59 (95)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3458999999999999999999999988776554433
No 277
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=69.33 E-value=8 Score=23.79 Aligned_cols=25 Identities=20% Similarity=0.090 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 260 YLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 260 ~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
..|.-.-..|++++|+.+|..+++.
T Consensus 24 ~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 24 INAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3344445668888888888877654
No 278
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=68.72 E-value=12 Score=23.31 Aligned_cols=28 Identities=18% Similarity=0.209 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHH
Q psy9209 111 GVWTLLGHEYMEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 111 ~~~~~la~~~~~~~~~~~A~~~~~~a~~ 138 (349)
..+...+..+...|+|++|+++.+++..
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3456677788888888888888777654
No 279
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=67.88 E-value=8.3 Score=23.71 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=15.3
Q ss_pred HHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 262 ANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 262 ~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
|.-.-..|++++|+.+|..+++.
T Consensus 18 Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 18 AVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHH
Confidence 33445557888888887777653
No 280
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=67.66 E-value=46 Score=26.64 Aligned_cols=123 Identities=10% Similarity=-0.035 Sum_probs=59.8
Q ss_pred HhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-----hchHHHHHHHHH
Q psy9209 7 DKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE-----ETAEEAKSLLRS 81 (349)
Q Consensus 7 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~-----~~~~~~~~~l~~ 81 (349)
...|+|=+|.+.++....+.-... ........++.-+..+.+.|++..|.+...-.++.. |-+......+..
T Consensus 24 I~~G~yYEAhQ~~Rtl~~Ry~~~~---~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~ 100 (312)
T 2wpv_A 24 IKAGDYYEAHQTLRTIANRYVRSK---SYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVR 100 (312)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHH
T ss_pred hhccChHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 345777777777666654432221 112222455556666666676666665544333321 111222112222
Q ss_pred HHHhcCCCcchHHHHHHHHHHHhh-------CcccHHHHHHHHHHHHhcCChHHHHHHHH
Q psy9209 82 IAQKRQPDESSSQAVLYFQRALKL-------NPNYLGVWTLLGHEYMEMKNTNAAIQCYR 134 (349)
Q Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 134 (349)
+...+-. ... .=.++.+++++- .-.++..+..+|..+...|++.+|..+|-
T Consensus 101 l~~~~p~-~~~-~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 101 LIAELDP-SEP-NLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHTTCCT-TCT-THHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHCCC-CCc-hHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2111110 111 112333333322 12357778888888888888888877774
No 281
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=67.61 E-value=33 Score=27.97 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9209 15 AADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCL 66 (349)
Q Consensus 15 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l 66 (349)
++.+|.+++........+.+- +-|..+|-.+++.+++.+|+..+..+-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~Hv----YPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHI----YPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCS----HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCc----cchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 667777777544443333322 457888889999999999998887764
No 282
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=66.54 E-value=25 Score=29.94 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=13.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHh
Q psy9209 114 TLLGHEYMEMKNTNAAIQCYRQAIEI 139 (349)
Q Consensus 114 ~~la~~~~~~~~~~~A~~~~~~a~~~ 139 (349)
+.+|.++...++|.+|.+.+..|+..
T Consensus 224 YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 224 YLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 44455555555555555555555444
No 283
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=66.02 E-value=35 Score=28.43 Aligned_cols=48 Identities=17% Similarity=0.291 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9209 15 AADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCL 66 (349)
Q Consensus 15 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l 66 (349)
++.+|.+++........+.+- +-|..+|-.+++.+++.+|+..+-.+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~Hv----YPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHI----YPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCS----HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCc----cceeecchhhhhcchHHHHHHHHHHHH
Confidence 566677776544433333322 458888999999999999998887664
No 284
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=65.54 E-value=37 Score=28.25 Aligned_cols=84 Identities=7% Similarity=-0.081 Sum_probs=55.3
Q ss_pred CcchHHHHHHHHHHHhhC-----------------cccHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-------Ccc-c
Q psy9209 89 DESSSQAVLYFQRALKLN-----------------PNYLGVWTLLGHEYMEMKNTNAAIQCYRQAIEI-------NNL-D 143 (349)
Q Consensus 89 ~~~~~~A~~~~~~~~~~~-----------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-------~~~-~ 143 (349)
..+.++|++.+++....- .....+...++..|...|+.++|...++++-.. +|. .
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~ 168 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRIT 168 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHH
Confidence 367888888887764321 011344567788899999999999998888653 221 2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy9209 144 YRAWYGLGQTYEILRLPYYGLYYYKQAHM 172 (349)
Q Consensus 144 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 172 (349)
...+...+..+...+++..+....-..+.
T Consensus 169 ~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 169 NSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34455566677778888777666555554
No 285
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=63.53 E-value=42 Score=24.76 Aligned_cols=67 Identities=12% Similarity=-0.060 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHccc
Q psy9209 211 DGKALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQHE 285 (349)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 285 (349)
...+|...+..+ ..+...++..+|.-+....-. ...+..|...|..+...|++.+|...|+..++..
T Consensus 79 YLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG-------~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 79 FLKIWIWYINLF-LSNNFHESENTFKYMFNKGIG-------TKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSS-------TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCc-------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 344555555543 223345666666665543221 1156667777777777777777777777777653
No 286
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=63.35 E-value=18 Score=26.80 Aligned_cols=52 Identities=8% Similarity=-0.017 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChH-----HHHHHHHHHHHHcCCC
Q psy9209 254 GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAE-----EAKSLLRSIAQKRQPD 305 (349)
Q Consensus 254 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~-----~~~~~l~~~~~~~~~~ 305 (349)
.....+.+|.++...++|.+|...+..|+...|... .+...+--+...+|+.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 577888999999999999999999999998876432 2233333344556664
No 287
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=63.17 E-value=7.6 Score=23.54 Aligned_cols=27 Identities=26% Similarity=0.118 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 42 FKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 42 ~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
...+|+-+...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 567899999999999999999999864
No 288
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=63.13 E-value=36 Score=23.81 Aligned_cols=45 Identities=9% Similarity=0.023 Sum_probs=21.9
Q ss_pred HHHHHHHHHhc--CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 163 GLYYYKQAHMV--RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 163 A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
+..+|.-+... ....+..|...|..+...|++.+|...|+..++.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 44444444332 2233344445555555555555555555555554
No 289
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=62.84 E-value=26 Score=25.96 Aligned_cols=32 Identities=16% Similarity=0.005 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCccc
Q psy9209 112 VWTLLGHEYMEMKNTNAAIQCYRQAIEINNLD 143 (349)
Q Consensus 112 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 143 (349)
..+.+|.++...++|.+|.+.+..|+...|..
T Consensus 16 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 16 YKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 45677777777777777777777777776644
No 290
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=62.13 E-value=11 Score=22.85 Aligned_cols=27 Identities=22% Similarity=0.361 Sum_probs=20.8
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHh
Q psy9209 113 WTLLGHEYMEMKNTNAAIQCYRQAIEI 139 (349)
Q Consensus 113 ~~~la~~~~~~~~~~~A~~~~~~a~~~ 139 (349)
...+|+-|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 356777788888888888888887763
No 291
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.31 E-value=33 Score=29.45 Aligned_cols=57 Identities=14% Similarity=0.036 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhccccCCCCC--------------cchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 12 TEAAADLFMEFVSKLDTFAAPPD--------------KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
++..+..+++++..++....... ......++..++++|+..|++++|....++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 34556666777766664331111 3344568889999999999999999999999864
No 292
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=58.85 E-value=33 Score=29.15 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 12 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
++..+..++.++..++... .........++..++++|+..|+|++|....++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~-~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEK-NNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSC-CTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccc-cCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3456666777776665432 2233344568889999999999999999999998854
No 293
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=57.85 E-value=47 Score=23.48 Aligned_cols=58 Identities=9% Similarity=-0.141 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCC--h-HHH------HHHHHHHHHhhCHHHHHHHHHHHHc
Q psy9209 149 GLGQTYEILRLPYYGLYYYKQAHMVRPND--P-RML------TALGEAFEKQEKISEAMKCYNKSRA 206 (349)
Q Consensus 149 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~--~-~~~------~~l~~~~~~~~~~~~A~~~~~~a~~ 206 (349)
.-+..++..|+|-+|-+.++.+....+.. . ..+ ...|....+.|+...|...+.+++.
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34455556677777777777776655443 1 111 2223344556777777777777655
No 294
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=57.84 E-value=47 Score=23.48 Aligned_cols=63 Identities=13% Similarity=0.115 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHcccccc---HHHHHH------HHHHHHhcCcHHHHHHHHHHHHhccc
Q psy9209 181 LTALGEAFEKQEKISEAMKCYNKSRAIGDAD---GKALFK------LAKLYDKLNETEAAADLFMEFVSKLD 243 (349)
Q Consensus 181 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~------l~~~~~~~~~~~~A~~~~~~~~~~~~ 243 (349)
-+..+..++..|+|=+|-+.++.+-...+.. ...+.. .|..+.+.|+...|...+.+++..-.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~ 106 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFR 106 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3556777888899999999999998875433 233333 34456778999999999999987543
No 295
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=57.22 E-value=49 Score=23.48 Aligned_cols=29 Identities=14% Similarity=0.278 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 179 RMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
..|...|..+...|++.+|...|+..++.
T Consensus 97 lfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 97 QFYISWAEEYEARENFRKADAIFQEGIQQ 125 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34444444444444444444444444443
No 296
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=55.84 E-value=27 Score=21.42 Aligned_cols=19 Identities=37% Similarity=0.436 Sum_probs=11.2
Q ss_pred HHhcCChHHHHHHHHHHHH
Q psy9209 120 YMEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 120 ~~~~~~~~~A~~~~~~a~~ 138 (349)
.-..|++++|+.+|.++++
T Consensus 29 ~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 29 ADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHH
Confidence 3455666666666665554
No 297
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=55.39 E-value=39 Score=29.12 Aligned_cols=57 Identities=14% Similarity=0.056 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhccccCCC--CCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 12 TEAAADLFMEFVSKLDTFAAP--PDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
++..+..+++++..++..... ........++..+|++|+..|+|++|....++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345566666676666543211 122334467888999999999999999999998854
No 298
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=54.87 E-value=54 Score=23.26 Aligned_cols=46 Identities=9% Similarity=0.026 Sum_probs=28.3
Q ss_pred HHHHHHHHHH--hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q psy9209 129 AIQCYRQAIE--INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVR 174 (349)
Q Consensus 129 A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 174 (349)
+..+|..+.. +....+..|...|..+...|++.+|..+|+.+++..
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQK 126 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4445555444 234456666666777777777777777777777654
No 299
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=54.25 E-value=44 Score=28.50 Aligned_cols=56 Identities=14% Similarity=-0.013 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhccccCCC----CCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 13 EAAADLFMEFVSKLDTFAAP----PDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 13 ~~A~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
+..+..+++++..++..... ........++..++++|+..|++++|....++++..
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 44555566666555322111 112334467888999999999999999999988864
No 300
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=54.01 E-value=94 Score=25.79 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 213 KALFKLAKLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
.+...++..+...|+.++|...++++-..-...+ ..+.......+...+..+...+++..+....-..+.
T Consensus 128 ~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~-~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 128 LIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKD-SIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSC-CSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccC-CccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 3455677778888888888888887765432210 111223455666667777888888877766666553
No 301
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=53.78 E-value=54 Score=22.92 Aligned_cols=49 Identities=8% Similarity=-0.031 Sum_probs=37.3
Q ss_pred HHHHHHHHHHH--hCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy9209 128 AAIQCYRQAIE--INNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMVRPN 176 (349)
Q Consensus 128 ~A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (349)
++..+|.-+.. +....+..|...|..+...|++.+|..+|+.+++....
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 36777777665 34556777888888888999999999999988886544
No 302
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=53.53 E-value=45 Score=28.96 Aligned_cols=57 Identities=7% Similarity=-0.003 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhccccC--CCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 12 TEAAADLFMEFVSKLDTFA--APPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
++..+..++.++..++... ..........++..++++++..+++++|....++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445666667766665421 12223344568889999999999999999999998853
No 303
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=53.37 E-value=44 Score=28.49 Aligned_cols=55 Identities=13% Similarity=0.054 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 13 EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 13 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
+..+..++.++..++... .........++..+|++|+..|+|++|....++++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~-~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDF-NKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSC-CTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccc-CCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 455666667766665432 2223444568889999999999999999999998864
No 304
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=53.25 E-value=40 Score=28.89 Aligned_cols=56 Identities=16% Similarity=0.117 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 12 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
++..+..++.++..++... .........++..++++|+..|+|++|....++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~-~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQET-SNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSC-CTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccc-cCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3455666666665555432 2223344568889999999999999999999988854
No 305
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=52.98 E-value=36 Score=29.23 Aligned_cols=55 Identities=16% Similarity=-0.001 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q psy9209 12 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 67 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~ 67 (349)
++..+..++.++..++.. ..........++..++++|+..+++++|+...++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~-~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPIT-NKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSS-CSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCC-CCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 345566666676666543 2222333446888899999999999999999998874
No 306
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=52.35 E-value=45 Score=30.07 Aligned_cols=54 Identities=7% Similarity=-0.026 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCCCCc
Q psy9209 255 FFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPDESS 308 (349)
Q Consensus 255 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 308 (349)
.......|...+..|+|.-|.+..+.++..+|++..++..++.++.++|...+.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~ 502 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAEN 502 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccC
Confidence 455666788888999999999999999999999999999999999988855544
No 307
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=51.92 E-value=33 Score=20.96 Aligned_cols=18 Identities=33% Similarity=0.453 Sum_probs=9.9
Q ss_pred HhcCChHHHHHHHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~ 138 (349)
-..|++++|+.+|..+++
T Consensus 22 D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 345566665555555544
No 308
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=50.90 E-value=62 Score=22.77 Aligned_cols=80 Identities=10% Similarity=-0.035 Sum_probs=37.3
Q ss_pred hhHHhhCcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHH-HHHHHHHHHhhh--hhchHHHHHHHH
Q psy9209 4 KLYDKLNETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLD-TAYKCAQKCLQH--EETAEEAKSLLR 80 (349)
Q Consensus 4 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~A~~~~~~~l~~--~~~~~~~~~~l~ 80 (349)
...+-..+|.+.+..++ ..++...+. ..-+.+|..|....++. +..+..-..+.+ +|+....|..+|
T Consensus 16 ~~afl~~dYs~VI~~L~----~~~~~~Lp~------~~kY~LA~SYI~~e~Ls~eQKenIln~itlkSde~yL~YWIyiG 85 (161)
T 2ynq_A 16 TELFLQNKYSDVITTLE----DYAPEDMPY------VIQYELASSYVMTESLTEEQRQTVSNNITLKTDEQYMLYWIYIG 85 (161)
T ss_dssp HHHHTTTCHHHHHHHHT----TSCGGGSCH------HHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTSCHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHh----cCChhhCCh------hHHHHHHHHHHHccCCCHHHHHHHHhhCCccCCHHHHHHHHHHc
Confidence 34445566666665552 222221111 45667777777666543 233333333332 232222222222
Q ss_pred HHHHhcCCCcchHHHHHHHHH
Q psy9209 81 SIAQKRQPDESSSQAVLYFQR 101 (349)
Q Consensus 81 ~~~~~~~~~~~~~~A~~~~~~ 101 (349)
.|++++|+...+.
T Consensus 86 --------Rg~~~eAlDiA~~ 98 (161)
T 2ynq_A 86 --------RSQSEEALELART 98 (161)
T ss_dssp --------HTCHHHHHHHHHH
T ss_pred --------CCchHHHHHHHHh
Confidence 3677777766554
No 309
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=49.48 E-value=38 Score=20.89 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=12.7
Q ss_pred HHHHhcCChHHHHHHHHHHHH
Q psy9209 118 HEYMEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 118 ~~~~~~~~~~~A~~~~~~a~~ 138 (349)
.-.-..|++++|+.+|..+++
T Consensus 24 ve~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 24 VELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 334556666666666666654
No 310
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=46.13 E-value=1.3e+02 Score=25.18 Aligned_cols=44 Identities=14% Similarity=0.193 Sum_probs=29.2
Q ss_pred HHHHHHHHHhc-----CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHc
Q psy9209 163 GLYYYKQAHMV-----RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRA 206 (349)
Q Consensus 163 A~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 206 (349)
++.+|.+++.. .......|..+|-.+++.+++.+|+..+-.+-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 45555555543 233456677788888888888888888776643
No 311
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=46.08 E-value=71 Score=22.08 Aligned_cols=54 Identities=9% Similarity=-0.077 Sum_probs=32.9
Q ss_pred HHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc
Q psy9209 154 YEILRLPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI 207 (349)
Q Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 207 (349)
+...|+-++-.+.+...+.-.+-+++.+..+|.+|.+.|+..+|.+.+.+|-+.
T Consensus 101 lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 344556666556666655555555666667777777777777777766666654
No 312
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=45.67 E-value=30 Score=21.39 Aligned_cols=16 Identities=13% Similarity=-0.031 Sum_probs=7.8
Q ss_pred hhCcHHHHHHHHHHHH
Q psy9209 8 KLNETEAAADLFMEFV 23 (349)
Q Consensus 8 ~~g~~~~A~~~~~~~~ 23 (349)
..|++++|+.+|.+++
T Consensus 28 ~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 28 SESRYPQALVCYQEGI 43 (86)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 3445555555554444
No 313
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=45.60 E-value=1.3e+02 Score=25.13 Aligned_cols=83 Identities=12% Similarity=0.110 Sum_probs=47.3
Q ss_pred CChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHhhCHHHHH
Q psy9209 124 KNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILRLPYYGLYYYKQAHMV-----RPNDPRMLTALGEAFEKQEKISEAM 198 (349)
Q Consensus 124 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~A~ 198 (349)
.+|.-|+-.+-..-++.|.... ..++..|++++.. .......|..+|-.+.+.+++.+|+
T Consensus 259 ~~YPmALgnLgDLEei~pt~gr---------------p~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl 323 (489)
T 4gq4_A 259 ERYPMALGNLADLEELEPTPGR---------------PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREAL 323 (489)
T ss_dssp TTCHHHHHHHHHHHHHSCCTTS---------------CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHH
T ss_pred hhcchhhhcccCHhhcCCCCCC---------------CCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHH
Confidence 4566666666666666554311 1233444444442 2334566777777777778888888
Q ss_pred HHHHHHHcc------ccccHHHHHHHHHH
Q psy9209 199 KCYNKSRAI------GDADGKALFKLAKL 221 (349)
Q Consensus 199 ~~~~~a~~~------~~~~~~~~~~l~~~ 221 (349)
..+-.+-.. ..++.++|-.+-.+
T Consensus 324 ~~wa~aa~Vi~~YnY~reDeEiYke~~eI 352 (489)
T 4gq4_A 324 QAWADTATVIQDYNYCREDEEIYKEFFEV 352 (489)
T ss_dssp HHHHHHHHHHTTSCCCTTCHHHHHHHHHH
T ss_pred HHhhhhhhhhhhcccccchHHHHHHHHHH
Confidence 777766443 33455666555444
No 314
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=44.93 E-value=33 Score=25.51 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=35.6
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCC
Q psy9209 261 LANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPD 305 (349)
Q Consensus 261 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 305 (349)
...++.+.|.|++|.+.+++....+|++......|..+-....-+
T Consensus 120 AV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~~ 164 (235)
T 3bu8_A 120 AVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLA 164 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCcc
Confidence 345678899999999999999998877777777777766655544
No 315
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.02 E-value=34 Score=22.55 Aligned_cols=13 Identities=8% Similarity=0.148 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHh
Q psy9209 127 NAAIQCYRQAIEI 139 (349)
Q Consensus 127 ~~A~~~~~~a~~~ 139 (349)
++|..+..++|++
T Consensus 20 ~~AF~~Is~AL~~ 32 (116)
T 2dl1_A 20 KKAFLFVNKGLNT 32 (116)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 3444444444443
No 316
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=42.71 E-value=54 Score=20.01 Aligned_cols=18 Identities=11% Similarity=0.204 Sum_probs=10.9
Q ss_pred HhcCChHHHHHHHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~ 138 (349)
-..|++++|+.+|..+++
T Consensus 24 D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 445666666666666554
No 317
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=41.97 E-value=56 Score=20.48 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=9.5
Q ss_pred HhcCChHHHHHHHHHHHH
Q psy9209 121 MEMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 121 ~~~~~~~~A~~~~~~a~~ 138 (349)
-..|+|++|+.+|..+++
T Consensus 26 D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 344555555555555544
No 318
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=41.62 E-value=96 Score=26.31 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=28.9
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
......++..++++|+..|++++|..+.++++.
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 445677888999999999999999999999885
No 319
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=40.80 E-value=69 Score=28.88 Aligned_cols=45 Identities=7% Similarity=-0.118 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhC
Q psy9209 114 TLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEILR 158 (349)
Q Consensus 114 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 158 (349)
...|......|+|.-|.++...++..+|++..+...++.+|.++|
T Consensus 453 ~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~ 497 (658)
T 2cfu_A 453 LEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLG 497 (658)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 444555555666666666666666666666666666666555554
No 320
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=40.70 E-value=1e+02 Score=26.29 Aligned_cols=34 Identities=18% Similarity=0.035 Sum_probs=29.8
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
......++..++++|+.+|++++|..+.++++..
T Consensus 187 r~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 187 KPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4456778899999999999999999999999864
No 321
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=40.64 E-value=1.5e+02 Score=24.30 Aligned_cols=44 Identities=20% Similarity=0.204 Sum_probs=30.3
Q ss_pred HHHHHHHHHhc-----CCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHc
Q psy9209 163 GLYYYKQAHMV-----RPNDPRMLTALGEAFEKQEKISEAMKCYNKSRA 206 (349)
Q Consensus 163 A~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 206 (349)
++..|.+++.. .......+..+|..+.+.+++.+|+..+-.+-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 55666666553 333456677788888888888888888876644
No 322
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=40.52 E-value=78 Score=27.32 Aligned_cols=54 Identities=11% Similarity=-0.001 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHH------hcCCHHHHHHHHHHHhh
Q psy9209 14 AAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHL------KANNLDTAYKCAQKCLQ 67 (349)
Q Consensus 14 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~A~~~~~~~l~ 67 (349)
.-+..++.++..++.............++..++++|+ ..+++++|+...++++.
T Consensus 163 ~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 163 WIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 3444555555444433211222333356677777776 45677777777777763
No 323
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=39.82 E-value=1e+02 Score=26.56 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
......++..+|++|+..|++++|..+.++++..
T Consensus 199 r~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 199 KIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3456778889999999999999999999999864
No 324
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=38.94 E-value=1.2e+02 Score=22.67 Aligned_cols=65 Identities=8% Similarity=-0.114 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHhhCcccHHH--------HHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Q psy9209 92 SSQAVLYFQRALKLNPNYLGV--------WTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRAWYGLGQTYEI 156 (349)
Q Consensus 92 ~~~A~~~~~~~~~~~~~~~~~--------~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 156 (349)
.+.|+..++..-+..+-.... ......++...|.|++|.+.+++....++.+......|..+-..
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 567777777665544321111 12233456778888888888888877766665555555554443
No 325
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=38.70 E-value=1.1e+02 Score=26.13 Aligned_cols=34 Identities=18% Similarity=0.071 Sum_probs=29.5
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
+.....++..+|++|+..|++++|..+.++++..
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4456778889999999999999999999999854
No 326
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=38.33 E-value=52 Score=18.33 Aligned_cols=39 Identities=13% Similarity=-0.021 Sum_probs=13.6
Q ss_pred chHHHHHHHHHHHhhCcccH-HHHHHHHHHHHhcCChHHHH
Q psy9209 91 SSSQAVLYFQRALKLNPNYL-GVWTLLGHEYMEMKNTNAAI 130 (349)
Q Consensus 91 ~~~~A~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~~~A~ 130 (349)
..++|..+.+ .+...+... -+-......+.+.|+|++|+
T Consensus 21 cH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 21 CHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp CHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 4455544333 233333322 22334455566666666654
No 327
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=37.65 E-value=1.4e+02 Score=23.08 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH-hCCHHHHHHHHHHHHc
Q psy9209 228 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK-ANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 228 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~ 283 (349)
.+.|...|+++..+. .. ....+|.......+.+..|+. .++.++|....++++.
T Consensus 172 ~e~a~~aY~~A~~iA-~~-L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KD-LEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHH-TT-SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-Hh-CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 357788899888765 21 122244444445555555555 7999999988887764
No 328
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=37.36 E-value=1.2e+02 Score=25.81 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=29.5
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
......++..+|++|+.+|++++|....++++..
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4556788899999999999999999999998853
No 329
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=36.98 E-value=1.3e+02 Score=26.14 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=30.1
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 250 DKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
.......++..++++++..+++++|....++++..
T Consensus 177 gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 177 GRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456778899999999999999999999999863
No 330
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=36.75 E-value=1.1e+02 Score=26.06 Aligned_cols=53 Identities=15% Similarity=0.114 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHcc
Q psy9209 231 AADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 284 (349)
Q Consensus 231 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 284 (349)
-+..++.++..-|.. ....+.....++..+|++|+..|++++|....++++..
T Consensus 179 I~~DL~~A~~~L~~~-~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 179 VVSDMSNALSGLRQE-TSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHGGGSCSS-CCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccc-ccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 334444444444431 12234456778889999999999999999999999863
No 331
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=36.10 E-value=63 Score=21.34 Aligned_cols=17 Identities=29% Similarity=0.516 Sum_probs=8.6
Q ss_pred hcCChHHHHHHHHHHHH
Q psy9209 122 EMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 122 ~~~~~~~A~~~~~~a~~ 138 (349)
..|+|++|+.+|..+++
T Consensus 30 ~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHH
Confidence 33555555555554443
No 332
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=35.82 E-value=2e+02 Score=24.20 Aligned_cols=84 Identities=14% Similarity=0.030 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhC---CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhhCHHHHHHHHHHHHcc-----ccccHHHHH
Q psy9209 145 RAWYGLGQTYEILR---LPYYGLYYYKQAHMVRPNDPRMLTALGEAFEKQEKISEAMKCYNKSRAI-----GDADGKALF 216 (349)
Q Consensus 145 ~~~~~l~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~ 216 (349)
.....|-++++..| +|.-|+-.+-..-++.|..... .++.+|++++.. ...+...|.
T Consensus 243 ~lQq~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp---------------~~~~Lf~~AI~~ar~~Y~~~hvYPYt 307 (489)
T 4gq4_A 243 QLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRP---------------DPLTLYHKGIASAKTYYRDEHIYPYM 307 (489)
T ss_dssp HHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSC---------------CHHHHHHHHHHHHHHHSTTCCSHHHH
T ss_pred HHHHHHHHHHHhccchhhcchhhhcccCHhhcCCCCCCC---------------CHHHHHHHHHHHHHHhcccCccccee
Confidence 34445555555544 6778888888877777665321 223455555543 233466677
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHhccc
Q psy9209 217 KLAKLYDKLNETEAAADLFMEFVSKLD 243 (349)
Q Consensus 217 ~l~~~~~~~~~~~~A~~~~~~~~~~~~ 243 (349)
.+|-.+.+.+++.+|+..+-.+-..-.
T Consensus 308 YlgG~~~R~~~~~eAl~~wa~aa~Vi~ 334 (489)
T 4gq4_A 308 YLAGYHCRNRNVREALQAWADTATVIQ 334 (489)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ecchHHHHhhhHHHHHHHhhhhhhhhh
Confidence 888889999999999999887765433
No 333
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=35.26 E-value=94 Score=27.06 Aligned_cols=55 Identities=11% Similarity=0.198 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhccc--cC--CCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q psy9209 13 EAAADLFMEFVSKLDT--FA--APPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 67 (349)
Q Consensus 13 ~~A~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~ 67 (349)
+..+..++.++..+|. .. ..........++..++++++..+++++|....++++.
T Consensus 168 ~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 168 KWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4455566666666652 11 1112233446788899999999999999999998885
No 334
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=33.81 E-value=1.2e+02 Score=21.04 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=47.4
Q ss_pred HHHHHhhCHHHHHHHHHHHHccccccHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q psy9209 186 EAFEKQEKISEAMKCYNKSRAIGDADGKALFKLAKLYDKLNETEAAADLFMEFVSKL 242 (349)
Q Consensus 186 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 242 (349)
..+..+|+-++-.+.+...+...+-++..+..+|.+|.+.|+..+|.+.+.++.+..
T Consensus 99 d~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 99 DILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 455678888888888888767677789999999999999999999999999998753
No 335
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=33.80 E-value=1.8e+02 Score=23.30 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhh-------hhchHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhhCcc-------
Q psy9209 43 KYLANHHLKANNLDTAYKCAQKCLQH-------EETAEEAKSLLRSIAQKRQPDESSSQAVLYFQRALKLNPN------- 108 (349)
Q Consensus 43 ~~l~~~~~~~~~~~~A~~~~~~~l~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------- 108 (349)
...|.-+...|++++|+..|+.++.. +.....-..-+..++..| -.--.++.-++.+..++.
T Consensus 118 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEY----ilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 118 MNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREY----ILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHH----HHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcCcccHHHHHHHH
Q ss_pred ------------cHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCcccHHH
Q psy9209 109 ------------YLGVWTLLGHEYMEMKNTNAAIQCYRQAIEINNLDYRA 146 (349)
Q Consensus 109 ------------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 146 (349)
...++..--...++.++|..|....++.+++.|....+
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a 243 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA 243 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH
No 336
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=33.79 E-value=1.8e+02 Score=23.27 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCChHH
Q psy9209 254 GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEETAEE 290 (349)
Q Consensus 254 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 290 (349)
...++..--...++.++|..|..+.++.+++.|....
T Consensus 197 ~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 233 (320)
T 3mkr_B 197 MILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEV 233 (320)
T ss_dssp HHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 3444444455678889999999999999999886443
No 337
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=33.63 E-value=1.1e+02 Score=23.18 Aligned_cols=55 Identities=16% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q psy9209 13 EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 67 (349)
Q Consensus 13 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~ 67 (349)
+.|...|+++.+.......+.+++....++..-...|--.++.++|+...++++.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
No 338
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=32.11 E-value=75 Score=20.99 Aligned_cols=23 Identities=30% Similarity=0.270 Sum_probs=14.7
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 261 LANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 261 l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
.|.-.-..|++++|+.+|..+++
T Consensus 24 ~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 24 KAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHH
Confidence 33344455777777777777765
No 339
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=31.70 E-value=2.9e+02 Score=24.93 Aligned_cols=30 Identities=7% Similarity=-0.061 Sum_probs=18.1
Q ss_pred HHHHHHHH--HHhhCHHHHHHHHHHHHcccccc
Q psy9209 181 LTALGEAF--EKQEKISEAMKCYNKSRAIGDAD 211 (349)
Q Consensus 181 ~~~l~~~~--~~~~~~~~A~~~~~~a~~~~~~~ 211 (349)
+..+..++ ...|+++.|++.+++ +.+-|.+
T Consensus 539 Ll~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 539 LLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 33444444 667888888888777 4455544
No 340
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=31.35 E-value=1.1e+02 Score=26.33 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=28.2
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
......++..++++|+..+++++|....++++.
T Consensus 176 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 176 KPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred cccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 444667888899999999999999999998874
No 341
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=31.05 E-value=30 Score=25.35 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=29.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHcccCChHHHHHHHHHHHHHcCCC
Q psy9209 261 LANHHLKANNLDTAYKCAQKCLQHEETAEEAKSLLRSIAQKRQPD 305 (349)
Q Consensus 261 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 305 (349)
...++.+.|.+++|.+.+++....++++......|..+-....-+
T Consensus 123 AV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~II~~Kd~~ 167 (211)
T 3bqo_A 123 AIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTF 167 (211)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHHHHTTCTT
T ss_pred HHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHHHHccCCC
Confidence 456789999999999999999888776666666666655544433
No 342
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=29.53 E-value=1.1e+02 Score=19.25 Aligned_cols=55 Identities=11% Similarity=-0.053 Sum_probs=28.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCccc-HHHHH-----HHHHHHHHhCCHHHHHHHHHHHHh
Q psy9209 116 LGHEYMEMKNTNAAIQCYRQAIEINNLD-YRAWY-----GLGQTYEILRLPYYGLYYYKQAHM 172 (349)
Q Consensus 116 la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~-----~l~~~~~~~~~~~~A~~~~~~~~~ 172 (349)
.|..++..|+|=+|-+.++..-...|.. ...+. ..|......|+. |...+.+++.
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3455566677777777777766655432 11111 222333345555 6666666554
No 343
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=27.94 E-value=2.1e+02 Score=22.12 Aligned_cols=29 Identities=14% Similarity=0.113 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhh
Q psy9209 41 AFKYLANHHLKANNLDTAYKCAQKCLQHE 69 (349)
Q Consensus 41 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~ 69 (349)
-+..++.+..+.++|++.+.+.+++...+
T Consensus 10 ~~v~~AkLaeqaeRyddm~~~mk~v~~~~ 38 (260)
T 1o9d_A 10 ENVYMAKLAEQAERYEEMVEFMEKVSNSL 38 (260)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHccC
Confidence 35677888888999999999999988866
No 344
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=27.18 E-value=2.2e+02 Score=22.04 Aligned_cols=54 Identities=13% Similarity=0.059 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH-hCCHHHHHHHHHHHHc
Q psy9209 229 EAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK-ANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 229 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~ 283 (349)
+.|...|+.+..+.... ....+|.......+.+..|+. .++.++|....++++.
T Consensus 152 e~a~~aY~~A~~iA~~~-L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTE-LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 56778888887654210 011234344445555555555 6999999988888764
No 345
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=26.26 E-value=2.2e+02 Score=21.81 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH-hCCHHHHHHHHHHHHc
Q psy9209 228 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK-ANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 228 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~ 283 (349)
.+.|...|+.+..+.... ....+|.......+.+..|+. .++.++|....++++.
T Consensus 147 ~~~a~~aY~~A~~iA~~~-L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEH-MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356777888877643210 011234344444555555555 7999999888777754
No 346
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=26.22 E-value=2.3e+02 Score=21.94 Aligned_cols=29 Identities=17% Similarity=0.215 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhh
Q psy9209 41 AFKYLANHHLKANNLDTAYKCAQKCLQHE 69 (349)
Q Consensus 41 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~ 69 (349)
-+..++.+..+.++|++.+.+.+++.+.+
T Consensus 30 ~~v~~AkLaeqaeRyddmv~~mk~v~~~~ 58 (260)
T 2npm_A 30 SNVYMAKLAEQAERYDEMAKYMKDVVEAR 58 (260)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcc
Confidence 35567888888899999998888888765
No 347
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=25.80 E-value=1.9e+02 Score=22.42 Aligned_cols=48 Identities=15% Similarity=-0.033 Sum_probs=21.1
Q ss_pred chHHHHHHHHHHHhhCcccHHH---HHHHHHHHH-hcCChHHHHHHHHHHHH
Q psy9209 91 SSSQAVLYFQRALKLNPNYLGV---WTLLGHEYM-EMKNTNAAIQCYRQAIE 138 (349)
Q Consensus 91 ~~~~A~~~~~~~~~~~~~~~~~---~~~la~~~~-~~~~~~~A~~~~~~a~~ 138 (349)
-|++|.+....-++..|.+|.- ..+.+..|+ -++++++|....++++.
T Consensus 174 aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 174 FYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3445555444333224444321 223333333 34556666555555544
No 348
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=25.80 E-value=2.2e+02 Score=21.60 Aligned_cols=55 Identities=15% Similarity=0.068 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH-hCCHHHHHHHHHHHHc
Q psy9209 228 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK-ANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 228 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~ 283 (349)
.+.|...|++++.+.... ....+|.......+.+..|+. .++.++|....++++.
T Consensus 146 ~e~a~~aY~~A~~iA~~~-L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTE-LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcc-CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356777888887654210 011234344444555555555 7999999888887764
No 349
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=25.38 E-value=1.9e+02 Score=24.90 Aligned_cols=55 Identities=16% Similarity=0.073 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhccccC-CCCCcchhHHHHHHHHHHHHhc------CCHHHHHHHHHHHhh
Q psy9209 13 EAAADLFMEFVSKLDTFA-APPDKTCGFFAFKYLANHHLKA------NNLDTAYKCAQKCLQ 67 (349)
Q Consensus 13 ~~A~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~------~~~~~A~~~~~~~l~ 67 (349)
+..++.+++++..++... ..........++..+|++|+.. +++++|....++++.
T Consensus 170 ~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 170 TYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 445566666665555421 1122234446788889988865 788999888888875
No 350
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=24.55 E-value=2.5e+02 Score=21.76 Aligned_cols=55 Identities=15% Similarity=0.068 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCcchHHHHHHHHHHHHH-hCCHHHHHHHHHHHHc
Q psy9209 228 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLK-ANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 228 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~ 283 (349)
.+.|...|+++..+.... ....+|.......+.+..|+. .++.++|....++++.
T Consensus 172 ~e~a~~aY~~A~~iA~~~-L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTE-LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356778888887653210 011234344445555555555 6999999888777754
No 351
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=24.12 E-value=2.1e+02 Score=24.65 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=26.3
Q ss_pred CcchHHHHHHHHHHHH------HhCCHHHHHHHHHHHHc
Q psy9209 251 KTCGFFAFKYLANHHL------KANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~------~~g~~~~A~~~~~~a~~ 283 (349)
......++..++++|+ ..+++++|..+.++++.
T Consensus 184 r~tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 184 VADQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp SCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 3445667788888877 57899999999999974
No 352
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=23.90 E-value=1.1e+02 Score=26.11 Aligned_cols=53 Identities=11% Similarity=-0.046 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHh-ccccCCCCCcchhHHHHHHHHHHHHhcC---------CHHHHHHHHHHHhh
Q psy9209 14 AAADLFMEFVSK-LDTFAAPPDKTCGFFAFKYLANHHLKAN---------NLDTAYKCAQKCLQ 67 (349)
Q Consensus 14 ~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~A~~~~~~~l~ 67 (349)
..+..++.++.. ++.. ..........++..++++|+..+ ++++|....++++.
T Consensus 163 ~I~~DL~~A~~~~Lp~~-~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 163 IIIPDLLEAEQSDLAFS-DHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp THHHHHHHHHTSCCCSC-CSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCc-CcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 345555666654 4421 12223344467888899988887 78888888888875
No 353
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=23.28 E-value=4.2e+02 Score=23.95 Aligned_cols=32 Identities=3% Similarity=-0.060 Sum_probs=20.8
Q ss_pred HHHHHHHHHHH--HHhCCHHHHHHHHHHHHcccCC
Q psy9209 255 FFAFKYLANHH--LKANNLDTAYKCAQKCLQHEET 287 (349)
Q Consensus 255 ~~~~~~l~~~~--~~~g~~~~A~~~~~~a~~~~~~ 287 (349)
...+..+..++ +..|+++.|+..+++ +.+-|.
T Consensus 536 ~~lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl 569 (661)
T 2qx5_A 536 CMLLLNISSIRELYFNKQWQETLSQMEL-LDLLPF 569 (661)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCC
Confidence 34445555555 778899999888887 334443
No 354
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.07 E-value=2e+02 Score=24.94 Aligned_cols=56 Identities=14% Similarity=0.008 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHhccccCCC--CC----cchhHHHHHHHHHHHHhc--------CCHHHHHHHHHHHhh
Q psy9209 12 TEAAADLFMEFVSKLDTFAAP--PD----KTCGFFAFKYLANHHLKA--------NNLDTAYKCAQKCLQ 67 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~l~~~~~~~--------~~~~~A~~~~~~~l~ 67 (349)
++.-+..++.++..++..... .. ......++..+|++|+.. +++++|....++++.
T Consensus 163 ~~~I~~DL~~A~~~Lp~~~~~~~~g~~~~r~tk~aA~allarvyL~~a~~~~~~~~~~~~A~~~a~~vi~ 232 (535)
T 3ihv_A 163 YEYIEDDLLYACDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGYPVKDESKWEAAAKTARILVE 232 (535)
T ss_dssp HHHHHHHHHHHHHHCCCTTTCCSSSCCTTSCCHHHHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcccccccccccccCccHHHHHHHHHHHHHHccCCcccCHHHHHHHHHHHHHHHh
Confidence 344556666666666543211 11 344456788899998886 568999999998875
No 355
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=22.64 E-value=3e+02 Score=22.07 Aligned_cols=28 Identities=11% Similarity=-0.018 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhh
Q psy9209 42 FKYLANHHLKANNLDTAYKCAQKCLQHE 69 (349)
Q Consensus 42 ~~~l~~~~~~~~~~~~A~~~~~~~l~~~ 69 (349)
-...|.-+...|++.+|+..|+.++..-
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i 132 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSV 132 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 4567888899999999999999998654
No 356
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=22.13 E-value=65 Score=23.64 Aligned_cols=26 Identities=0% Similarity=-0.372 Sum_probs=11.5
Q ss_pred HHHHhCCHHHHHHHHHHHHhcCCCCh
Q psy9209 153 TYEILRLPYYGLYYYKQAHMVRPNDP 178 (349)
Q Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (349)
++.+.|.+++|.+.+++....++.+.
T Consensus 126 VCiekg~Fk~A~eiLkr~f~~~~~~~ 151 (211)
T 3bqo_A 126 VCMENGNFKEAEEVFERIFGDPNSHM 151 (211)
T ss_dssp HHHHTTCHHHHHHHHHHHC-----CC
T ss_pred HHHHccchHHHHHHHHHHhcCCCCch
Confidence 44555555555555555555444443
No 357
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=21.89 E-value=2.4e+02 Score=24.47 Aligned_cols=33 Identities=12% Similarity=0.312 Sum_probs=28.9
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHc
Q psy9209 251 KTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQ 283 (349)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 283 (349)
......++..+|++++..+++++|....++++.
T Consensus 194 r~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 194 RACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 445677888999999999999999999999885
No 358
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=21.69 E-value=1.5e+02 Score=18.34 Aligned_cols=47 Identities=11% Similarity=0.057 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHcccCC--hHHHH-HHHHHHHH
Q psy9209 254 GFFAFKYLANHHLKANNLDTAYKCAQKCLQHEET--AEEAK-SLLRSIAQ 300 (349)
Q Consensus 254 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~--~~~~~-~~l~~~~~ 300 (349)
.......-|.-+++.+++.+|...|+++.....+ -..+. +.++.|..
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~k 101 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRK 101 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHH
Confidence 4566677788899999999999999999765433 22333 55666644
No 359
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=21.57 E-value=1.5e+02 Score=23.05 Aligned_cols=51 Identities=10% Similarity=0.049 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhhhhhchHHHHHHHHHHHHh-cCCCcchHHHHHHHHHHHhh
Q psy9209 55 LDTAYKCAQKCLQHEETAEEAKSLLRSIAQK-RQPDESSSQAVLYFQRALKL 105 (349)
Q Consensus 55 ~~~A~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~~~A~~~~~~~~~~ 105 (349)
|++|.+....-++..|.+|..+-+.-+.+.. |.-.+++++|....++++..
T Consensus 175 Yq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 175 YEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 5566666655444466666554443333332 33457777777777777654
No 360
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=21.49 E-value=3.5e+02 Score=22.48 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy9209 212 GKALFKLAKLYDKLNETEAAADLFME 237 (349)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~A~~~~~~ 237 (349)
...+...|.++..+|+.+.|.++++.
T Consensus 336 ~~~~~eYA~lLA~qG~l~~A~~yL~~ 361 (399)
T 2pm7_A 336 IAKFLEFINLTTSTGNFELATEFLNS 361 (399)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 44556677888888888888887763
No 361
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=21.46 E-value=1.5e+02 Score=18.26 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9209 12 TEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKC 65 (349)
Q Consensus 12 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 65 (349)
.++=+..++++++.+.. ..+-...+..|+.=|..++..|++..|+..+.-+
T Consensus 11 i~kYi~~l~eaL~~i~~---a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 11 TLKWLERIEERVKEIEG---DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHGGGEEE---CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33445555666654432 1122223345666677777788888777766543
No 362
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=20.92 E-value=1.9e+02 Score=19.73 Aligned_cols=42 Identities=10% Similarity=-0.105 Sum_probs=25.4
Q ss_pred CcHHHHHHHHHHHHHhccccCCCCCcchhHHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q psy9209 10 NETEAAADLFMEFVSKLDTFAAPPDKTCGFFAFKYLANHHLKANNLDTAYKCAQKCLQH 68 (349)
Q Consensus 10 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 68 (349)
|+.+++..+++++.. ....+...+..|.++.|.-..+++.+.
T Consensus 4 ~~~ee~~~wl~~A~~-----------------dl~~A~~~~~~g~y~~a~F~aqQA~Ek 45 (141)
T 3o10_A 4 GNPVEARRWLRQARA-----------------NFSAARNDLHKNANEWVCFKCYLSTKL 45 (141)
T ss_dssp CCHHHHHHHHHHHHH-----------------HHHHHGGGTTTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHh-----------------hhhHHhhHHhhCccceEeeehhHHHHH
Confidence 566777777766652 334455556667776666666665543
No 363
>3jq0_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE GOL SO4; 1.13A {Bacteroides vulgatus atcc 8482}
Probab=20.77 E-value=1.8e+02 Score=24.97 Aligned_cols=55 Identities=5% Similarity=-0.122 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhccccCCC-CCc--chhHHHHHHHHHHHHhcC--------CHHHHHHHHHHHhh
Q psy9209 13 EAAADLFMEFVSKLDTFAAP-PDK--TCGFFAFKYLANHHLKAN--------NLDTAYKCAQKCLQ 67 (349)
Q Consensus 13 ~~A~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~~l~ 67 (349)
+..+..++.++..++..... ... .....++..+|++|+..+ ++++|+...++++.
T Consensus 154 ~~I~~DL~~A~~~Lp~~~~~~~gr~~~tk~aA~allArvyL~~~~~~~~~~~~~~~A~~~a~~vi~ 219 (493)
T 3jq0_A 154 EQIKKDIQASENAFGSDYSFKLGRHFWSAAATQMLKGEAYLWSGRQMNGGNSDYTIAKNAFENVKK 219 (493)
T ss_dssp HHHHHHHHHHHHHHTTCCSCTTCTTSCCHHHHHHHHHHHHHHHHHHSSCTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCccccccCCcccccHHHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHh
Confidence 44455556666555533211 111 233457778888888665 67888888888775
Done!