BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9210
(234 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242023614|ref|XP_002432227.1| protein SSU72, putative [Pediculus humanus corporis]
gi|212517624|gb|EEB19489.1| protein SSU72, putative [Pediculus humanus corporis]
Length = 195
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/236 (57%), Positives = 163/236 (69%), Gaps = 43/236 (18%)
Query: 1 MPS--NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCS 58
MPS NLK+AV CSSNMNRSMEAHA+LSKKG VKSFGTGDK
Sbjct: 1 MPSLNNLKIAVSCSSNMNRSMEAHAFLSKKGFFVKSFGTGDK------------------ 42
Query: 59 ELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRN 118
+ GTA DKPNVYDF +Y++IYQDL+NKDK FYT+N
Sbjct: 43 ---------------------VKLPGTAPDKPNVYDF-GCSYDEIYQDLLNKDKTFYTQN 80
Query: 119 GLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
GLLHML+RN+RIKL PE+FQ +KFDIIITCEERVYDQV+E +N+ S ENTPVH+IN
Sbjct: 81 GLLHMLDRNRRIKLGPERFQSCMEKFDIIITCEERVYDQVIEALENRP-STENTPVHIIN 139
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IDIQDN EEAT+GAFL EL++ + +DLDN+IDE++ +FE KC R +LH ++FY
Sbjct: 140 IDIQDNHEEATIGAFLLCELVTKLSQSDDLDNDIDELLHDFEAKCDRAILHCVMFY 195
>gi|383855882|ref|XP_003703439.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Megachile rotundata]
Length = 195
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 163/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P+++ VAV+CSSNMNRSMEAHA+LSKKG +VKSFGTGDK
Sbjct: 4 PNSISVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDK--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A D+PN+YDF TTY++IY DL++KDK +YT+NGLL
Sbjct: 43 ------------------VKLPGNAPDRPNIYDF-GTTYDEIYNDLLSKDKQYYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK KPE+FQ SKDKFDI+ITCEERVYDQV+E +++ +N PVHLINIDI
Sbjct: 84 HMLDRNRRIKPKPERFQLSKDKFDILITCEERVYDQVIECMESRTPE-DNQPVHLINIDI 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEAT+G+FL EL+++ EDLDN+IDE++ EFE K +R +LHT+LFY
Sbjct: 143 QDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFARTILHTVLFY 195
>gi|307193223|gb|EFN76114.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Harpegnathos saltator]
Length = 195
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 162/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P+++ VAV+CSSNMNRSMEAHA+LSKKG +VKSFGTGDK
Sbjct: 4 PNSISVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDK--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A D+PN+YDF T+Y++IY DL+ KDK +YT+NGLL
Sbjct: 43 ------------------VKLPGNAPDRPNIYDF-GTSYDEIYNDLLTKDKQYYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK +PE+FQ SKDKFDI+ITCEERVYDQV+E +++ +N PVHLINIDI
Sbjct: 84 HMLDRNRRIKPRPERFQLSKDKFDILITCEERVYDQVIECMESRTQE-DNQPVHLINIDI 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEAT+G+FL EL+++ EDLDN+IDE++ EFE K SR +LHT+LFY
Sbjct: 143 QDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFSRTILHTVLFY 195
>gi|332024507|gb|EGI64705.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Acromyrmex echinatior]
Length = 195
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 163/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P+++ VAV+CSSNMNRSMEAHA+LSKKG +VKSFGTGDK
Sbjct: 4 PNSISVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDK--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ GTA D+PN+YDF T+Y++IY DL+ KDK +YT+NGLL
Sbjct: 43 ------------------VKLPGTAPDRPNIYDF-GTSYDEIYNDLLMKDKQYYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK +PE+FQ SKDKFDI+I+CEERVYDQV+E +++ +N PVHLINIDI
Sbjct: 84 HMLDRNRRIKPRPERFQLSKDKFDILISCEERVYDQVIECMESRTKE-DNQPVHLINIDI 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEAT+G+FL EL+++ EDLDN+IDE++ EFE K +R +LHT+LFY
Sbjct: 143 QDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFEAKFARTILHTVLFY 195
>gi|307173644|gb|EFN64495.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Camponotus floridanus]
Length = 195
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 161/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P+++ VAV+CSSNMNRSMEAHA+L KKG +VKSFGTGDK
Sbjct: 4 PNSISVAVICSSNMNRSMEAHAFLGKKGFNVKSFGTGDK--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ GTA D+PN+YDF TTY++IY DL+ KDK +YT+NGLL
Sbjct: 43 ------------------VKLPGTAPDRPNIYDF-GTTYDEIYNDLLMKDKQYYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK +PE+FQ SKDKFDI+ITCEERVYDQV+E +++ +N PVHLINIDI
Sbjct: 84 HMLDRNRRIKPRPERFQLSKDKFDILITCEERVYDQVIECMESRTKE-DNQPVHLINIDI 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEAT+G+FL EL+++ EDLDN+IDE++ EFE K R +LHT+LFY
Sbjct: 143 QDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFVRTILHTVLFY 195
>gi|340717362|ref|XP_003397153.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Bombus terrestris]
gi|350413377|ref|XP_003489976.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Bombus impatiens]
Length = 195
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 163/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P+++ VAV+CSSNMNRSMEAHA+LSKKG +VKSFGTGDK
Sbjct: 4 PNSISVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDK--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A D+PN+YDF T+Y++IY DL++KDK +YT+NGLL
Sbjct: 43 ------------------VKLPGNAPDRPNIYDF-GTSYDEIYNDLLSKDKQYYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK KPE+FQ SKDKFDI+ITCEERVYDQV+E +++ ++ PVHLINIDI
Sbjct: 84 HMLDRNRRIKPKPERFQLSKDKFDILITCEERVYDQVIECMESRTQE-DSQPVHLINIDI 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEAT+G+FL EL+++ EDLDN+IDE++ EFE K +R +LHT+LFY
Sbjct: 143 QDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFARTILHTVLFY 195
>gi|48139949|ref|XP_397061.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Apis mellifera]
gi|380015137|ref|XP_003691566.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Apis florea]
Length = 195
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 164/236 (69%), Gaps = 43/236 (18%)
Query: 1 MPSN--LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCS 58
MP++ + VAV+CSSNMNRSMEAHA+LSKKG +VKSFGTGDK
Sbjct: 1 MPASNSISVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDK------------------ 42
Query: 59 ELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRN 118
+ G A D+PN+YDF T+Y++IY DL++KDK +YT+N
Sbjct: 43 ---------------------VKLPGNAPDRPNIYDF-GTSYDEIYNDLLSKDKQYYTQN 80
Query: 119 GLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
GLLHML+RN+RIK KPE+FQ SKDKFDI+ITCEERVYDQV+E +++ ++ PVHLIN
Sbjct: 81 GLLHMLDRNRRIKPKPERFQLSKDKFDILITCEERVYDQVIECMESRT-QEDSQPVHLIN 139
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IDIQDN EEAT+G+FL EL+++ EDLDN+IDE++ EFE K +R +LHT+LFY
Sbjct: 140 IDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFARTILHTVLFY 195
>gi|321479422|gb|EFX90378.1| hypothetical protein DAPPUDRAFT_39456 [Daphnia pulex]
Length = 192
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 157/234 (67%), Gaps = 42/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP LK+AV+CSSNMNRSMEAH +LSKKG V+SFGTGDK
Sbjct: 1 MPQPLKLAVICSSNMNRSMEAHNFLSKKGYRVQSFGTGDKV------------------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A D+PNVY+F T Y+DIYQDL+ KD+ YTRNGL
Sbjct: 42 --------------------KLPGAAPDRPNVYEF-GTPYDDIYQDLLQKDRELYTRNGL 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK PE+FQ + ++F++I+TCEERVYDQV+E + + + TPVH++NI+
Sbjct: 81 LHMLDRNRRIKPHPERFQSTTEQFNLILTCEERVYDQVIESLEGR--DSQTTPVHVVNIE 138
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEAT+GAFL EL+SM +DLDN+IDE++Q+FE KC RP+LH +LFY
Sbjct: 139 IQDNHEEATIGAFLMCELVSMMANSDDLDNDIDEMLQDFEAKCQRPILHCLLFY 192
>gi|193636719|ref|XP_001949489.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Acyrthosiphon pisum]
Length = 194
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/232 (52%), Positives = 162/232 (69%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+ K+AVVCSSNMNRSMEAHA+LSKKG +V+SFGTGDK
Sbjct: 4 SDFKIAVVCSSNMNRSMEAHAFLSKKGFNVRSFGTGDKV--------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA +KPN+YDF +Y+DIY+DL NKDK +YT+NGLL+
Sbjct: 43 ------------------KLPGTAQEKPNIYDF-GCSYDDIYKDLYNKDKTYYTQNGLLN 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PE+FQE ++F ++ITCEERVYDQVLE+F+N ++S N PVH+INI+IQ
Sbjct: 84 MLDRNRRIKQHPERFQECNEQFTVVITCEERVYDQVLEYFEN-ILSFGNRPVHVININIQ 142
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAFL EL+++ + EDLDN+ID+++ ++EEKC R L + +LFY
Sbjct: 143 DNHEEATIGAFLICELVTLLSRSEDLDNDIDQLVVKYEEKCQRSLFNCVLFY 194
>gi|241177326|ref|XP_002399947.1| LDL receptor-related protein, putative [Ixodes scapularis]
gi|215495225|gb|EEC04866.1| LDL receptor-related protein, putative [Ixodes scapularis]
Length = 193
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 154/234 (65%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP +L++AVVCSSN NRSMEAHA+LSKKG V+SFG+G +
Sbjct: 1 MPGSLRIAVVCSSNQNRSMEAHAFLSKKGFKVRSFGSGAQV------------------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G+A DKPNVYDF TYE +YQDLM KDKA YT+NG+
Sbjct: 42 --------------------KLPGSAPDKPNVYDF-GVTYEQMYQDLMEKDKALYTQNGI 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK PE+FQ DKFD+I T EERVYDQV+E ++ + +N+PVH+IN+D
Sbjct: 81 LHMLDRNRRIKSSPERFQNCYDKFDVIFTVEERVYDQVVEELSGRL-TCDNSPVHIINLD 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEAT+GAFL E+ M EDLDN+IDE++QEFE K RP+LHT+ FY
Sbjct: 140 IQDNHEEATIGAFLICEIAQMMSDSEDLDNDIDELIQEFEAKAQRPILHTVQFY 193
>gi|346471353|gb|AEO35521.1| hypothetical protein [Amblyomma maculatum]
Length = 193
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 155/234 (66%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP +L++AVVCSSN NRSMEAHA+LSKKG V+SFG+G +
Sbjct: 1 MPGSLRLAVVCSSNQNRSMEAHAFLSKKGFKVRSFGSGAQV------------------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G+A DKPNVYDF TYE +YQDLM+KDKA YT+NG+
Sbjct: 42 --------------------KLPGSAPDKPNVYDF-GVTYEQMYQDLMDKDKALYTQNGI 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK PE+FQ +KFD+I T EERVYDQV+E N++ +N+PVH+IN+D
Sbjct: 81 LHMLDRNRRIKPNPERFQSCYEKFDVIFTVEERVYDQVVEELSNRL-PCDNSPVHIINLD 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEAT+GAFL E+ M EDLDN+IDE++QEFE K RP+LHT+ FY
Sbjct: 140 IQDNHEEATIGAFLICEMAQMMSDSEDLDNDIDELIQEFEAKAQRPILHTVQFY 193
>gi|427787055|gb|JAA58979.1| Putative ssu72-like protein [Rhipicephalus pulchellus]
Length = 193
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 154/234 (65%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP +L++AVVCSSN NRSMEAHA+LSKKG V+SFG+G +
Sbjct: 1 MPGSLRLAVVCSSNQNRSMEAHAFLSKKGFKVRSFGSGAQV------------------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G+A DKPNVYDF TYE +YQDLM KDKA YT+NG+
Sbjct: 42 --------------------KLPGSAPDKPNVYDF-GVTYEQMYQDLMEKDKALYTQNGI 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK PE+FQ DKFD+I T EERVYDQV+E N++ +N+PVH+IN+D
Sbjct: 81 LHMLDRNRRIKPTPERFQSCYDKFDVIFTVEERVYDQVVEELSNRL-PCDNSPVHIINLD 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEAT+GAFL E+ M EDLDN+IDE++Q+FE K RP+LHT+ FY
Sbjct: 140 IQDNHEEATIGAFLICEMAQMMSDSEDLDNDIDELIQDFEAKAQRPILHTVQFY 193
>gi|332376743|gb|AEE63511.1| unknown [Dendroctonus ponderosae]
Length = 195
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 159/231 (68%), Gaps = 41/231 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L++AV+CSSNMNRSMEAHA+LSKKG V SFGTGDK
Sbjct: 5 SDLRIAVICSSNMNRSMEAHAFLSKKGFRVNSFGTGDK---------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
I G+A D+PN+Y+F T+Y+DIY+DL+ KDK YT+NGLLH
Sbjct: 43 -----------------VKIPGSAADRPNIYEF-GTSYDDIYKDLLEKDKTLYTQNGLLH 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+RIK PEKFQ+S +KFDI++TCEERVYDQVLE +N+ S +N+ VH+INIDI+
Sbjct: 85 TLDRNRRIKSHPEKFQDSTEKFDILVTCEERVYDQVLEFMENKAPS-DNSIVHVINIDIR 143
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
DN EEAT+GAFL S+L + EDLDN+I+E++ FEEKC RP+LH+I+F
Sbjct: 144 DNLEEATIGAFLISDLCMHIVTAEDLDNDIEEVLHSFEEKCQRPILHSIVF 194
>gi|91081991|ref|XP_968963.1| PREDICTED: similar to phosphatase SSU72, putative [Tribolium
castaneum]
gi|270007315|gb|EFA03763.1| hypothetical protein TcasGA2_TC013874 [Tribolium castaneum]
Length = 195
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 161/231 (69%), Gaps = 41/231 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L++AV+CSSNMNRSMEAHA+L+KKG V+SFGTGDK
Sbjct: 5 SDLRIAVICSSNMNRSMEAHAFLAKKGFLVQSFGTGDK---------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
I G+A DKPN+YDF +Y++IY DL+ KDK+ YT+NGLLH
Sbjct: 43 -----------------VKIPGSAADKPNIYDF-GISYDEIYHDLLGKDKSLYTQNGLLH 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+RIK PE+FQE+ +KFDI+ITCEERVYDQV+E+ +++ ++N+ VH+INIDIQ
Sbjct: 85 TLDRNRRIKTHPERFQETDEKFDILITCEERVYDQVVEYMESKT-PVDNSIVHVINIDIQ 143
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
DN EEAT+GAFL S++ M K EDLDN+I+E++ FEEKC RP+LH+I+F
Sbjct: 144 DNLEEATIGAFLISDMCLMLAKAEDLDNDIEEVLHNFEEKCQRPILHSIVF 194
>gi|443734572|gb|ELU18503.1| hypothetical protein CAPTEDRAFT_1792 [Capitella teleta]
Length = 195
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 156/234 (66%), Gaps = 41/234 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP+ L++AVVCSSN NRSMEAH +LSK+G +VKSFG+G
Sbjct: 1 MPAEILRIAVVCSSNQNRSMEAHNFLSKRGFNVKSFGSGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G + D+PN+YDF TTTY+ +Y+DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPSPDRPNIYDFKTTTYDQMYRDLIEKDKNLYTQNG 81
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
LLHML+RN+RIK KP++FQ D FD+IITCEERVYDQV+E +N+ S E H+INI
Sbjct: 82 LLHMLDRNRRIKEKPQRFQSCPDHFDLIITCEERVYDQVVEDLENRDNS-EAESCHIINI 140
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
DIQDN EEAT+GAF+ +L++M KCEDLDNE+DE++QEFE +C RPLLHT +F
Sbjct: 141 DIQDNHEEATIGAFMICDLVAMLAKCEDLDNEVDEMVQEFEGQCQRPLLHTAIF 194
>gi|195432298|ref|XP_002064160.1| GK20018 [Drosophila willistoni]
gi|194160245|gb|EDW75146.1| GK20018 [Drosophila willistoni]
Length = 195
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 161/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS VAVVCSSNMNRSMEAH +L+KKG V+S+GTG++
Sbjct: 4 PSKFSVAVVCSSNMNRSMEAHNFLAKKGYSVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A+DKPNVY+F T+YEDIY+DL KDK FYT+NGLL
Sbjct: 43 ------------------VRLPGVAIDKPNVYEF-GTSYEDIYRDLEAKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIVTVEERVYDLVVLHMES-MDSVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ +K DLDN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNAEDALMGAFLITDMINLMVKSNDLDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|317575682|ref|NP_001187275.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Ictalurus punctatus]
gi|308322587|gb|ADO28431.1| RNA polymerase II subunit a c-terminal domain phosphatase ssu72
[Ictalurus punctatus]
Length = 194
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/235 (53%), Positives = 150/235 (63%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYSDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHMLERNKRIK +PE+FQ KD+FD++ITCEERVYDQVLE N PVH+IN+
Sbjct: 81 ILHMLERNKRIKTRPERFQSCKDQFDLVITCEERVYDQVLEDL-NSREQETFQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL +D++N+IDE++QEFE+K SRP LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTDDMENDIDELLQEFEDKSSRPFLHTVCFY 194
>gi|194762702|ref|XP_001963473.1| GF20420 [Drosophila ananassae]
gi|190629132|gb|EDV44549.1| GF20420 [Drosophila ananassae]
Length = 195
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 161/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLSVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T+YEDIY+DL KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGIAFDKPNVYEF-GTSYEDIYRDLETKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIVTVEERVYDLVVLHMES-MDSVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ K DLDN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNAEDALMGAFLITDMINLMAKSTDLDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|195479696|ref|XP_002100991.1| GE15863 [Drosophila yakuba]
gi|194188515|gb|EDX02099.1| GE15863 [Drosophila yakuba]
Length = 195
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 161/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T+YEDIY+DL KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGMAFDKPNVYEF-GTSYEDIYRDLEAKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIVTVEERVYDLVVLHMES-MESVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ K DLDN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNAEDALMGAFLITDMINLMAKSTDLDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|348507869|ref|XP_003441478.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Oreochromis niloticus]
Length = 194
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 155/236 (65%), Gaps = 44/236 (18%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGS-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 41 -------------------HVKLPGPAPDKPNVYDF-KTTYEQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDN-QMISLENTPVHLIN 178
+LHML+RNKRIK KPE+FQ KDKFD++ITCEERVYDQV+E ++ + +L+ PVH+IN
Sbjct: 81 ILHMLDRNKRIKSKPERFQNCKDKFDLVITCEERVYDQVVEDLNSREQETLQ--PVHVIN 138
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DIQDN EEATLGAFL EL +D++NEIDE++QEFE+K +RP LHT+ FY
Sbjct: 139 VDIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFEDKSNRPFLHTVCFY 194
>gi|157112000|ref|XP_001657367.1| phosphatase SSU72, putative [Aedes aegypti]
gi|108878198|gb|EAT42423.1| AAEL006036-PA [Aedes aegypti]
Length = 197
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 154/232 (66%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L +AV+CSSNMNRSMEAH +L+KK V+SFGTGDK
Sbjct: 7 SPLSIAVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDK---------------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA DKPN+YDF T+Y+DIY DL +KDK +YT+NGLLH
Sbjct: 45 -----------------VKLPGTAADKPNIYDF-GTSYDDIYTDLASKDKQYYTQNGLLH 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+++TCEERVYDQV+E +++ + N PVH+INIDIQ
Sbjct: 87 MLDRNRRIKPSPEKFQLCTERFDVLVTCEERVYDQVIEFMESKTPTY-NLPVHVINIDIQ 145
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAF +L++M + +DLDN+IDE++ +FE KC R +LH +LFY
Sbjct: 146 DNHEEATVGAFAICDLITMMAQSDDLDNDIDELLHDFEGKCQRSVLHCVLFY 197
>gi|118789785|ref|XP_317836.3| AGAP011470-PA [Anopheles gambiae str. PEST]
gi|116122738|gb|EAA13083.3| AGAP011470-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 153/232 (65%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L +AV+CSSNMNRSMEAH +L+KK V+SFGTGDK
Sbjct: 7 SPLSIAVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDKV--------------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA D+PNVY+F TTY+DIY DL KDK +YT+NGLLH
Sbjct: 46 ------------------KLPGTAADRPNVYEF-GTTYDDIYNDLAAKDKQYYTQNGLLH 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+++TCEERVYDQV+E +++ S N PVH+INIDIQ
Sbjct: 87 MLDRNRRIKSCPEKFQLCTERFDVLVTCEERVYDQVIEFMESKTPSY-NLPVHVINIDIQ 145
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAFL +L++M + EDLDN+IDE++ +FE KC R +LH + FY
Sbjct: 146 DNHEEATVGAFLICDLITMMAQSEDLDNDIDELLHDFENKCQRSVLHCVQFY 197
>gi|195042055|ref|XP_001991356.1| GH12100 [Drosophila grimshawi]
gi|193901114|gb|EDV99980.1| GH12100 [Drosophila grimshawi]
Length = 195
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 162/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSNMNRSMEAH++L+KKG +V+S+GTG++
Sbjct: 4 PSKLSVAVVCSSNMNRSMEAHSFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T+YE+IY+DL KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGLAFDKPNVYEF-GTSYEEIYRDLEAKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDIIIT EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIITVEERVYDLVVLHMES-MNSVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ K D+DN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNTEDALMGAFLITDMLNLMAKSNDIDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|194893081|ref|XP_001977808.1| GG19244 [Drosophila erecta]
gi|190649457|gb|EDV46735.1| GG19244 [Drosophila erecta]
Length = 195
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 161/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS + VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKIAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T+YEDIY+DL KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGMAFDKPNVYEF-GTSYEDIYRDLEAKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIVTVEERVYDLVVLHMES-MESVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ K DLDN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNAEDALMGAFLITDMINLMAKSTDLDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|170071677|ref|XP_001869977.1| phosphatase SSU72 [Culex quinquefasciatus]
gi|167867653|gb|EDS31036.1| phosphatase SSU72 [Culex quinquefasciatus]
Length = 197
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 154/232 (66%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L VAV+CSSNMNRSMEAH +L+KK V+SFGTGDK
Sbjct: 7 SPLSVAVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDK---------------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA DKPNVY+F T+Y+DI+ DL NKDK +YT+NGLLH
Sbjct: 45 -----------------VKLPGTAADKPNVYEF-GTSYDDIFSDLANKDKNYYTQNGLLH 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+++TCEERVYDQV+E +++ + N PVH+INIDIQ
Sbjct: 87 MLDRNRRIKTCPEKFQLCTERFDVLVTCEERVYDQVIEFMESKTPTY-NLPVHVINIDIQ 145
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAF +L++M + +DLDN+IDE++ +FE KC R +LH +LFY
Sbjct: 146 DNHEEATVGAFAICDLITMMAQSDDLDNDIDELLHDFESKCQRSVLHCVLFY 197
>gi|19920366|ref|NP_608342.1| Ssu72 ortholog, isoform A [Drosophila melanogaster]
gi|7293626|gb|AAF48998.1| Ssu72 ortholog, isoform A [Drosophila melanogaster]
gi|16648400|gb|AAL25465.1| LD40846p [Drosophila melanogaster]
gi|220946200|gb|ACL85643.1| CG14216-PA [synthetic construct]
gi|220955962|gb|ACL90524.1| CG14216-PA [synthetic construct]
Length = 195
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 160/233 (68%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGMAFDKPNVYEF-GTKYEDIYRDLESKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMHMES-MESVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAF+ +++++M K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 143 VDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
>gi|195399195|ref|XP_002058206.1| GJ15959 [Drosophila virilis]
gi|194150630|gb|EDW66314.1| GJ15959 [Drosophila virilis]
Length = 195
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 162/233 (69%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLSVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T+YE+IY+DL +KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGLAFDKPNVYEF-GTSYEEIYRDLESKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDIIIT EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIITVEERVYDLVVMHMES-MDSVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ K D+DN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNAEDALMGAFLITDMLNLMAKSNDIDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|213511468|ref|NP_001133126.1| Ssu72 RNA polymerase II CTD phosphatase-like [Salmo salar]
gi|197632027|gb|ACH70737.1| Ssu72 RNA polymerase II CTD phosphatase-like [Salmo salar]
Length = 194
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 152/235 (64%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD+FD++ITCEERVYDQVLE ++ TPVH+IN+
Sbjct: 81 ILHMLDRNKRIKSRPERFQSCKDQFDLVITCEERVYDQVLEDLSSREQET-FTPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL +D++NE+DE++QEFE+K +RP LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEDKSNRPFLHTVCFY 194
>gi|221579697|gb|ACM24350.1| Ssu72 domain protein [Bombyx mori]
Length = 192
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 155/232 (66%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L VAVVCSSNMNRSMEAHA+L KKG +VKS+GTG+K
Sbjct: 2 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEK---------------------- 39
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G + D+PN Y+F Y++IY DLM KDK +YT+NGLLH
Sbjct: 40 -----------------VKLPGASADRPNCYEF-GVLYDEIYNDLMEKDKNYYTQNGLLH 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+IITCEERVYDQV+E F ++ S+ N PVH++NIDIQ
Sbjct: 82 MLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRR-SIYNQPVHVVNIDIQ 140
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAFL S++++ + +DLDN+IDE++ EFE KC RP L+ I+FY
Sbjct: 141 DNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPSLNCIMFY 192
>gi|432958989|ref|XP_004086144.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Oryzias latipes]
Length = 194
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 151/235 (64%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH+ LSK+G +V+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHSILSKRGFEVRSFGTGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK KPE+FQ K+KFD++ITCEERVYDQVLE N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKSKPERFQLCKEKFDLVITCEERVYDQVLEDL-NSREQETMQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL +D++NEIDE++QEFE+K +RP LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFEDKSNRPFLHTVCFY 194
>gi|195134304|ref|XP_002011577.1| GI11105 [Drosophila mojavensis]
gi|193906700|gb|EDW05567.1| GI11105 [Drosophila mojavensis]
Length = 195
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 160/233 (68%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PGKLSVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T+YE+IY+DL KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGLAFDKPNVYEF-GTSYEEIYRDLEAKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQE+K++FDIIIT EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 84 HMLDRNRRIKKCPERFQETKEQFDIIITVEERVYDLVVMHMES-MESVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAFL ++++++ K D+DN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 143 VDNAEDALMGAFLITDMLNLLAKSNDIDNDIDEMIQEFEERRNRVILHSVLFY 195
>gi|114052000|ref|NP_001040442.1| Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori]
gi|95102912|gb|ABF51397.1| Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori]
Length = 192
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 155/232 (66%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L VAVVCSSNMNRSMEAHA+L KKG +VKS+GTG+K
Sbjct: 2 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEK---------------------- 39
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G + D+PN Y+F Y++IY DLM KDK +YT+NGLLH
Sbjct: 40 -----------------VKLPGASADRPNCYEF-GVLYDEIYNDLMEKDKNYYTQNGLLH 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+IITCEERVYDQV+E ++ S+ N PVH++NIDIQ
Sbjct: 82 MLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWLGSRR-SIYNQPVHVVNIDIQ 140
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAFL S++++ + +DLDN+IDE++ EFE KC RP+L+ I+FY
Sbjct: 141 DNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 192
>gi|260812926|ref|XP_002601171.1| hypothetical protein BRAFLDRAFT_121072 [Branchiostoma floridae]
gi|229286462|gb|EEN57183.1| hypothetical protein BRAFLDRAFT_121072 [Branchiostoma floridae]
Length = 196
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 154/236 (65%), Gaps = 45/236 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+L +AVVCSSN NRSMEAHA+LSKKG VKSFGTG +
Sbjct: 2 GDLNIAVVCSSNQNRSMEAHAFLSKKGFRVKSFGTGSQV--------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF----YTRN 118
+ G A DKPNVYDF TTY+ +++DL KD A YT+N
Sbjct: 41 ------------------KLPGPAPDKPNVYDF-GTTYDQMHKDLTQKDLALLKPRYTQN 81
Query: 119 GLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
G+LHML+RNKRIK +PE+FQ +K++FDI++TCEERVYDQV+E + + S + PVH+IN
Sbjct: 82 GILHMLDRNKRIKPRPERFQSAKERFDIVVTCEERVYDQVVEDLETR-DSGADAPVHVIN 140
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IDIQDN EEAT+GAFL +L M +DL+NE+DEI+Q FEEKC+RP+LHT+ FY
Sbjct: 141 IDIQDNHEEATIGAFLICDLCQMLQDSDDLENEMDEILQAFEEKCNRPILHTVSFY 196
>gi|218505661|ref|NP_001136192.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
gi|209738232|gb|ACI69985.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
Length = 194
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 152/235 (64%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G +V+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFEVRSFGTGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD+FD++ITCEERVYDQVLE ++ TPVH+IN+
Sbjct: 81 ILHMLDRNKRIKSRPERFQSCKDQFDLVITCEERVYDQVLEDLSSREQET-FTPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL +D++NE+DE++QEFE+K +RP LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEDKSNRPFLHTVCFY 194
>gi|410919603|ref|XP_003973273.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Takifugu rubripes]
Length = 194
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 153/236 (64%), Gaps = 44/236 (18%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G DKPNVYDF TTY +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPTPDKPNVYDF-KTTYVQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDN-QMISLENTPVHLIN 178
+LHML+RNKRIK KPE+FQ KD+FD++ITCEERVYDQV+E ++ + +L+ PVH+IN
Sbjct: 81 ILHMLDRNKRIKTKPERFQNCKDRFDLVITCEERVYDQVVEDLNSREQETLQ--PVHVIN 138
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DIQDN EEATLGAFL EL ED++NEI+E++QEFEEK +RP LHT+ FY
Sbjct: 139 VDIQDNHEEATLGAFLICELCQCIQHTEDMENEIEELLQEFEEKSNRPFLHTVCFY 194
>gi|225715534|gb|ACO13613.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Esox lucius]
Length = 194
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 152/235 (64%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ K++FD++I+CEERVYDQVLE ++ TPVH+IN+
Sbjct: 81 ILHMLDRNKRIKSRPERFQSCKEQFDLVISCEERVYDQVLEDLSSREQET-FTPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL +D++NE+DE++QEFE+K +RP LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEDKSNRPFLHTVCFY 194
>gi|195345791|ref|XP_002039452.1| GM22980 [Drosophila sechellia]
gi|194134678|gb|EDW56194.1| GM22980 [Drosophila sechellia]
Length = 195
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 159/232 (68%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 5 SKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER---------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLLH
Sbjct: 43 -----------------VKLPGMAFDKPNVYEF-GTKYEDIYRDLESKDKEFYTQNGLLH 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 85 MLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVLHMES-MESVDNRPVHVLNVDVV 143
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAF+ +++++M K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 144 DNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
>gi|41152271|ref|NP_957022.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Danio rerio]
gi|82187008|sp|Q6PC19.1|SSU72_DANRE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|37589826|gb|AAH59504.1| Zgc:73143 [Danio rerio]
Length = 194
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 146/233 (62%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 3 PHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHV-------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPN+YDF TTYE +Y DL+ KDK YT+NG+L
Sbjct: 43 -------------------KLPGPAPDKPNIYDF-KTTYEQMYNDLVRKDKELYTQNGIL 82
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RNKRIK +PE+FQ +D+FD++ITCEERVYDQVLE N PVH+IN+DI
Sbjct: 83 HMLDRNKRIKSRPERFQSCRDQFDLVITCEERVYDQVLEDL-NSREQESFQPVHVINVDI 141
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEATLGAFL EL +D++NE+DE++QEFEEK RP LH++ FY
Sbjct: 142 QDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEEKSHRPFLHSVCFY 194
>gi|195567755|ref|XP_002107424.1| GD17455 [Drosophila simulans]
gi|194204831|gb|EDX18407.1| GD17455 [Drosophila simulans]
Length = 195
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 158/230 (68%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 7 LAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER------------------------ 42
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLLHML
Sbjct: 43 ---------------VKLPGMAFDKPNVYEF-GTKYEDIYRDLESKDKEFYTQNGLLHML 86
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+ DN
Sbjct: 87 DRNRRIKKCPERFQDTKERFDIIVTVEERVYDLVVLHMES-MESVDNRPVHVLNVDVVDN 145
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E+A +GAF+ +++++M K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 146 AEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
>gi|334350280|ref|XP_001362341.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Monodelphis domestica]
Length = 373
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 147/234 (62%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
M S+L+VAVVCSSN NRSMEAH LSK+G +V+SFGTG
Sbjct: 181 MQSSLRVAVVCSSNQNRSMEAHNILSKRGFNVRSFGTGT--------------------- 219
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+
Sbjct: 220 ------------------HVKLPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGI 260
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+D
Sbjct: 261 LHMLDRNRRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVD 319
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEATLGAFL EL ED++NEIDE++QEFEEK +R LHT+ FY
Sbjct: 320 IQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSNRTFLHTVCFY 373
>gi|319443651|pdb|3OMW|A Chain A, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443652|pdb|3OMW|B Chain B, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443653|pdb|3OMW|C Chain C, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443654|pdb|3OMW|D Chain D, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443655|pdb|3OMX|A Chain A, Crystal Structure Of Ssu72 With Vanadate Complex
gi|319443656|pdb|3OMX|B Chain B, Crystal Structure Of Ssu72 With Vanadate Complex
gi|319443657|pdb|3OMX|C Chain C, Crystal Structure Of Ssu72 With Vanadate Complex
gi|319443658|pdb|3OMX|D Chain D, Crystal Structure Of Ssu72 With Vanadate Complex
Length = 190
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 158/230 (68%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 2 LAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER------------------------ 37
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLLHML
Sbjct: 38 ---------------VKLPGMAFDKPNVYEF-GTKYEDIYRDLESKDKEFYTQNGLLHML 81
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+ DN
Sbjct: 82 DRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMHMES-MESVDNRPVHVLNVDVVDN 140
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E+A +GAF+ +++++M K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 141 AEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 190
>gi|126306611|ref|XP_001362860.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Monodelphis domestica]
Length = 194
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 147/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK SR LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSSRTFLHTVCFY 194
>gi|311258315|ref|XP_003127550.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sus scrofa]
Length = 227
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 34 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 75
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG
Sbjct: 76 ---------------------KLPGPAPDKPNVYDFRTT-YDQMYNDLLRKDKELYTQNG 113
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 114 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 172
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 173 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 227
>gi|444515605|gb|ELV10936.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 193
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 144/234 (61%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP L+VAVVCSSN NRSMEAH+ LSK+G V+SFGTG
Sbjct: 1 MPLPLRVAVVCSSNQNRSMEAHSILSKRGFSVRSFGTGTHV------------------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NGL
Sbjct: 42 --------------------KLPGAAPDKPNVYDFRTT-YDQMYHDLLRKDKELYTQNGL 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RNKRIK PE+FQ +D FD+I+TCEERVYDQV+E ++ PVH++N+D
Sbjct: 81 LHMLDRNKRIKAAPERFQSCRDVFDLIVTCEERVYDQVVEELSSREQET-CQPVHVVNVD 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEATLGAFL EL ED++NEI E++Q+FEEK R LHT+ FY
Sbjct: 140 IQDNHEEATLGAFLICELCQCLQHAEDMENEISELLQDFEEKSGRTFLHTVCFY 193
>gi|397471566|ref|XP_003807358.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Pan paniscus]
Length = 355
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 142/230 (61%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 167 LRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGT------------------------- 201
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML
Sbjct: 202 --------------HVKLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHML 246
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+DIQDN
Sbjct: 247 DRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNVDIQDN 305
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 306 HEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 355
>gi|327290403|ref|XP_003229912.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Anolis carolinensis]
Length = 194
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYSDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDVFDLILTCEERVYDQVIEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
>gi|417397459|gb|JAA45763.1| Putative rna polymerase ii subunit a c-terminal domain phosphatase
ssu72-like protein [Desmodus rotundus]
Length = 227
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 34 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGT-------------------- 73
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KD+ YT+NG
Sbjct: 74 -------------------HVKLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDRELYTQNG 113
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 114 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 172
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 173 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 227
>gi|56119014|ref|NP_001007876.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Gallus gallus]
gi|82081744|sp|Q5ZJQ7.1|SSU72_CHICK RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|53133414|emb|CAG32036.1| hypothetical protein RCJMB04_16f24 [Gallus gallus]
Length = 194
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDVFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
>gi|344283598|ref|XP_003413558.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Loxodonta africana]
Length = 194
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|391326056|ref|XP_003737541.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Metaseiulus occidentalis]
Length = 193
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 146/234 (62%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MPS+L+ AV+CSSN NRSME H +LSK+G V+SFGTGDK
Sbjct: 1 MPSSLRFAVICSSNQNRSMETHLFLSKRGFKVRSFGTGDK-------------------- 40
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A DKPNVYDF T YE ++QDL KD YT NG+
Sbjct: 41 -------------------VKLPGNAPDKPNVYDF-GTPYEAMFQDLKKKDLLLYTNNGI 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
+ ML+RNKRIKL PE+FQ++ D FD+I T EERVYDQVLE F + I +PVH++NID
Sbjct: 81 MSMLDRNKRIKLAPERFQQNFDIFDVIFTVEERVYDQVLEEFSKRPIRY-TSPVHIVNID 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ DN EEATLGAF+ EL + EDLDN+IDE++QEFE +RP+LHT+ FY
Sbjct: 140 VMDNHEEATLGAFMFCELAQLMADSEDLDNDIDELLQEFESSKNRPILHTVQFY 193
>gi|442617006|ref|NP_001259725.1| Ssu72 ortholog, isoform B [Drosophila melanogaster]
gi|440216962|gb|AGB95565.1| Ssu72 ortholog, isoform B [Drosophila melanogaster]
Length = 194
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 159/233 (68%), Gaps = 42/233 (18%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T YEDIY+DL +KDK YT+NGLL
Sbjct: 43 ------------------VKLPGMAFDKPNVYEF-GTKYEDIYRDLESKDKD-YTQNGLL 82
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 83 HMLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMHMES-MESVDNRPVHVLNVDV 141
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A +GAF+ +++++M K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 142 VDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 194
>gi|115496564|ref|NP_001069817.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Bos taurus]
gi|122145744|sp|Q17QI2.1|SSU72_BOVIN RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|109659375|gb|AAI18345.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[Bos taurus]
Length = 194
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
>gi|71043762|ref|NP_001020828.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Rattus norvegicus]
gi|348551480|ref|XP_003461558.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cavia porcellus]
gi|123782057|sp|Q4KLK9.1|SSU72_RAT RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|68533835|gb|AAH99142.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[Rattus norvegicus]
gi|149024820|gb|EDL81317.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) [Rattus
norvegicus]
Length = 194
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|356640183|ref|NP_001239254.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Canis lupus familiaris]
Length = 194
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ +D FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCRDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|7661832|ref|NP_054907.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Homo sapiens]
gi|387849206|ref|NP_001248476.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Macaca mulatta]
gi|114550590|ref|XP_001147261.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 isoform 2 [Pan troglodytes]
gi|296206493|ref|XP_002750231.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Callithrix jacchus]
gi|395840809|ref|XP_003793244.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Otolemur garnettii]
gi|402852635|ref|XP_003891022.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Papio anubis]
gi|426327444|ref|XP_004024528.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Gorilla gorilla gorilla]
gi|74752877|sp|Q9NP77.1|SSU72_HUMAN RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|6841584|gb|AAF29145.1|AF161530_1 HSPC182 [Homo sapiens]
gi|7023312|dbj|BAA91921.1| unnamed protein product [Homo sapiens]
gi|14165533|gb|AAH08070.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[Homo sapiens]
gi|18073354|emb|CAC81713.1| hypothetical protein [Homo sapiens]
gi|119576587|gb|EAW56183.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|123990476|gb|ABM83913.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[synthetic construct]
gi|123999318|gb|ABM87235.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[synthetic construct]
gi|380783997|gb|AFE63874.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Macaca mulatta]
gi|383417757|gb|AFH32092.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Macaca mulatta]
gi|410214818|gb|JAA04628.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
gi|410253112|gb|JAA14523.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
gi|410308116|gb|JAA32658.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
gi|410335863|gb|JAA36878.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
Length = 194
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
>gi|308198622|pdb|3O2S|B Chain B, Crystal Structure Of The Human Symplekin-Ssu72 Complex
Length = 214
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 21 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 62
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 63 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 100
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 101 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 159
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 160 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 214
>gi|431896766|gb|ELK06070.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 194
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 145/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPTPPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK PE+FQ+ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPGPERFQDCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|12751087|gb|AAK07538.1|AF277178_1 PNAS-120 [Homo sapiens]
Length = 194
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEE+ R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEERVGRTFLHTVCFY 194
>gi|315113756|pdb|3P9Y|A Chain A, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
gi|315113757|pdb|3P9Y|B Chain B, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
gi|315113758|pdb|3P9Y|C Chain C, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
gi|315113759|pdb|3P9Y|D Chain D, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
Length = 198
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 41/232 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVV SSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 7 PSKLAVAVVDSSNMNRSMEAHNFLAKKGFNVRSYGTGER--------------------- 45
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLL
Sbjct: 46 ------------------VKLPGMAFDKPNVYEF-GTKYEDIYRDLESKDKEFYTQNGLL 86
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
HML+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+
Sbjct: 87 HMLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMHMES-MESVDNRPVHVLNVDV 145
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
+N E+A +GAF+ +++++M K DLDN+IDE++QEFEE+ R +LH++LF
Sbjct: 146 VNNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLF 197
>gi|291234902|ref|XP_002737376.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog isoform
2 [Saccoglossus kowalevskii]
Length = 192
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 151/232 (65%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+NLK+AVVCSSN NRSMEAH LSKKG +VKSFGTG
Sbjct: 2 NNLKIAVVCSSNQNRSMEAHGLLSKKGFNVKSFGTGTHV--------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G A DKPNVYDF TT YE +Y+DL +KD YT+NG+LH
Sbjct: 41 ------------------KLPGPAPDKPNVYDFQTT-YEQMYKDLEDKDINLYTQNGILH 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK +PE+FQ SKDKFDI+ITCEERVYDQV+E F+++ + VH++NIDIQ
Sbjct: 82 MLDRNRRIKPRPERFQSSKDKFDIVITCEERVYDQVVEDFESREQETGQS-VHVLNIDIQ 140
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEATLGAF S+ +C DL+N+IDE++Q+FE K +R +LHT+ FY
Sbjct: 141 DNHEEATLGAFQILNFCSLIRECTDLENDIDELLQDFELKENRDILHTVCFY 192
>gi|348563735|ref|XP_003467662.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cavia porcellus]
Length = 194
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 148/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP+ L+VAVVC SN NRSMEAHA LSK+G +V+SFGTG
Sbjct: 1 MPALPLRVAVVCFSNQNRSMEAHAILSKRGFNVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+++Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDEMYHDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEER+YDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERIYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDNQEEATLGAFL EL ED+DNE++E++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNQEEATLGAFLICELCQCIQHTEDIDNEMEELLQEFEEKTGRAFLHTVCFY 194
>gi|354495817|ref|XP_003510025.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cricetulus griseus]
gi|344251691|gb|EGW07795.1| hypothetical protein I79_018214 [Cricetulus griseus]
Length = 194
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL +L ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICDLCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|172088095|ref|NP_081175.2| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Mus musculus]
gi|81904403|sp|Q9CY97.1|SSU72_MOUSE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|12859235|dbj|BAB31582.1| unnamed protein product [Mus musculus]
gi|148683079|gb|EDL15026.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 194
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 145/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ D FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCTDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|62858895|ref|NP_001016264.1| SSU72 RNA polymerase II CTD phosphatase homolog [Xenopus (Silurana)
tropicalis]
gi|169642209|gb|AAI60490.1| hypothetical protein LOC549018 [Xenopus (Silurana) tropicalis]
gi|213624284|gb|AAI70887.1| hypothetical protein LOC549018 [Xenopus (Silurana) tropicalis]
gi|213625570|gb|AAI70883.1| hypothetical protein LOC549018 [Xenopus (Silurana) tropicalis]
Length = 194
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 145/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP+ L+VAVVCSSN NRSMEAH LSK+ +V+SFGTG
Sbjct: 1 MPTAPLRVAVVCSSNQNRSMEAHNILSKRSFNVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYNDLLKKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RN+RIK +PE+FQ KD FD++ITCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNRRIKPRPERFQNCKDNFDLVITCEERVYDQVVEEL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFE+K R LHTI FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEDKSGRTFLHTICFY 194
>gi|390349510|ref|XP_780352.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Strongylocentrotus purpuratus]
Length = 210
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 151/234 (64%), Gaps = 43/234 (18%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP L++AVVCSSN NRSMEAHA LSKKG +VKS+GTG
Sbjct: 20 MP--LRIAVVCSSNQNRSMEAHAILSKKGFNVKSYGTG---------------------- 55
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+V L G A DKPN+YDF TTYE++YQDL KD+ YT+NG+
Sbjct: 56 ------------ATVKL-----PGPAQDKPNIYDF-KTTYEEMYQDLKRKDRDLYTQNGI 97
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK KPE+FQ SKDKFD+++T EERVYDQVLE F+++ + PVH+INID
Sbjct: 98 LHMLDRNRRIKSKPERFQNSKDKFDVVLTAEERVYDQVLEDFESKEEETQ-IPVHIINID 156
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEAT+GAF S L DLD EIDE++Q FEE+ + +LHT+ FY
Sbjct: 157 IQDNHEEATIGAFRMSNLCIKLEALRDLDKEIDELIQLFEEELNISVLHTLCFY 210
>gi|148222547|ref|NP_001084864.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Xenopus laevis]
gi|82185273|sp|Q6NRQ7.1|SSU72_XENLA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|47123913|gb|AAH70675.1| Ssu72 protein [Xenopus laevis]
Length = 194
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 145/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP+ L+VAVVCSSN NRSMEAH LSK+ +V+SFGTG
Sbjct: 1 MPTAPLRVAVVCSSNQNRSMEAHNILSKRSFNVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYSDLLKKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RN+RIK +PE+FQ KD FD++ITCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNRRIKPRPERFQNCKDYFDLVITCEERVYDQVVEEL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFE+K R LHTI FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEDKSGRTFLHTICFY 194
>gi|148228728|ref|NP_001089572.1| uncharacterized protein LOC734628 [Xenopus laevis]
gi|68534027|gb|AAH98966.1| MGC114707 protein [Xenopus laevis]
Length = 194
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP+ L+VAVVCSSN NRSMEAH LSK+ ++V+SFGTG
Sbjct: 1 MPTAPLRVAVVCSSNQNRSMEAHNILSKRSINVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KTTYEQMYSDLLKKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RN+R+K +PE+FQ KD FD++ITCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNRRVKPRPERFQNCKDYFDLVITCEERVYDQVVEEL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++Q+FE+K R LHTI FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQDFEDKSGRTFLHTICFY 194
>gi|351698000|gb|EHB00919.1| hypothetical protein GW7_08759 [Heterocephalus glaber]
Length = 194
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 147/235 (62%), Gaps = 42/235 (17%)
Query: 1 MP-SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP S L+VAVVC SN NRSMEAHA LSK+G V+SFGTG +
Sbjct: 1 MPDSPLQVAVVCFSNQNRSMEAHAILSKRGFKVRSFGTGTQV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TT Y+++Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDFKTT-YDEMYHDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPGPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDNQEEATLGAFL EL ED+D+E+DE++QEFEEK + LHT+ FY
Sbjct: 140 DIQDNQEEATLGAFLICELCQCIQLTEDIDDEMDELLQEFEEKTGKAFLHTVCFY 194
>gi|12837628|dbj|BAB23890.1| unnamed protein product [Mus musculus]
Length = 194
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 144/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNVYDF-KPTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ D FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCTDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|308198617|pdb|3O2Q|B Chain B, Crystal Structure Of The Human Symplekin-Ssu72-Ctd
Phosphopeptide Complex
gi|308198619|pdb|3O2Q|E Chain E, Crystal Structure Of The Human Symplekin-Ssu72-Ctd
Phosphopeptide Complex
gi|410563131|pdb|4H3H|B Chain B, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Poymerase Ii Ctd Peptide
Phosphorylated At Ser-7
gi|410563133|pdb|4H3H|E Chain E, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Poymerase Ii Ctd Peptide
Phosphorylated At Ser-7
gi|410563136|pdb|4H3K|B Chain B, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Polymerase Ii Ctd Peptide
Phosphorylated At Ser-2, Ser-5 And Ser-7
gi|410563138|pdb|4H3K|E Chain E, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Polymerase Ii Ctd Peptide
Phosphorylated At Ser-2, Ser-5 And Ser-7
Length = 214
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 145/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVV SSN NRSMEAH LSK+G V+SFGTG
Sbjct: 21 MPSSPLRVAVVSSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 62
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 63 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 100
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 101 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 159
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 160 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 214
>gi|291407829|ref|XP_002720252.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog
[Oryctolagus cuniculus]
Length = 191
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 145/234 (61%), Gaps = 43/234 (18%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP L+VAVVCSSN NRSMEAH LSK+G +V+SFGTG
Sbjct: 1 MP--LRVAVVCSSNQNRSMEAHNILSKRGFNVRSFGTGTHV------------------- 39
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+
Sbjct: 40 --------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGI 78
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+D
Sbjct: 79 LHMLDRNRRIKPRPERFQSCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNVD 137
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEATLGAFL EL ED++NEI+E++QEFEEK R LHT+ FY
Sbjct: 138 IQDNPEEATLGAFLICELCQCIQHTEDMENEIEELLQEFEEKSGRAFLHTVCFY 191
>gi|355722031|gb|AES07451.1| Ssu72 RNA polymerase II CTD phosphatase-like protein [Mustela
putorius furo]
Length = 189
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 141/229 (61%), Gaps = 41/229 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 2 LRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV----------------------- 38
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML
Sbjct: 39 ----------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHML 81
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RNKRIK +PE+FQ +D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN
Sbjct: 82 DRNKRIKPRPERFQNCRDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDN 140
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ F
Sbjct: 141 HEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCF 189
>gi|357607252|gb|EHJ65407.1| Ssu72 RNA polymerase II CTD phosphatase [Danaus plexippus]
Length = 179
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 147/220 (66%), Gaps = 41/220 (18%)
Query: 15 MNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQIS 74
MNRSMEAHA+L+KKG VKS+GTG+K
Sbjct: 1 MNRSMEAHAFLAKKGFKVKSYGTGEK---------------------------------- 26
Query: 75 VNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKP 134
+ G + D+PN Y+F Y+DIY DL+ KDKA+YT+NGLLHML+RN+RIK P
Sbjct: 27 -----VKLPGASADRPNCYEF-GVPYDDIYNDLLEKDKAYYTQNGLLHMLDRNRRIKPCP 80
Query: 135 EKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFL 194
EKFQ S ++FD+IITCEERVYDQV+E F ++ S+ N PVH++N+DIQDN EEAT+GAFL
Sbjct: 81 EKFQVSTERFDVIITCEERVYDQVIEWFGSKR-SVYNQPVHVVNVDIQDNHEEATIGAFL 139
Query: 195 ASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
S++++ + +DLDN+IDE++ EFE KC RP+L+ I+FY
Sbjct: 140 ISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 179
>gi|351697484|gb|EHB00403.1| hypothetical protein GW7_21672 [Heterocephalus glaber]
Length = 194
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 145/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DK +VYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKTHVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
>gi|440911715|gb|ELR61352.1| hypothetical protein M91_10915, partial [Bos grunniens mutus]
Length = 202
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 146/240 (60%), Gaps = 47/240 (19%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 4 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------ 45
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF----- 114
+ G A DKPNVYDF TTY+ +Y DL+ KDK
Sbjct: 46 ---------------------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELHPILS 83
Query: 115 YTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPV 174
YT+NG+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PV
Sbjct: 84 YTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPV 142
Query: 175 HLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
H+IN+DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 143 HVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 202
>gi|311277074|ref|XP_003135483.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sus scrofa]
Length = 194
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 142/230 (61%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVCSSN NRSMEAH+ LSK+G V+SFGTG
Sbjct: 6 LRVAVVCSSNQNRSMEAHSILSKRGFSVRSFGTG-------------------------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML
Sbjct: 40 -------------AHVKLPGPAPDKPNVYDFRTT-YDQMYNDLLMKDKDLYTQNGILHML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RNKRIK +PE+FQ KD FD+IITCEERVYD V+E N PVH+IN+DIQDN
Sbjct: 86 DRNKRIKPRPERFQNCKDPFDLIITCEERVYDLVVEDL-NSREQETCQPVHVINVDIQDN 144
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEATLGAFL EL ED+DNEI+E++QEFEEK + LHT+ FY
Sbjct: 145 HEEATLGAFLICELCQCIQHTEDVDNEIEELLQEFEEKSGQTFLHTVCFY 194
>gi|47229651|emb|CAG06847.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 153/271 (56%), Gaps = 77/271 (28%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGT-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G DKPNVYDF TTY +Y DL+ KDK YT+NG
Sbjct: 41 -------------------HVKLPGPTPDKPNVYDF-KTTYVQMYNDLVRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDN--------------- 164
+LHML+RNKRIK KPE+FQ KD+FD+++TCEERVYDQV+E D+
Sbjct: 81 ILHMLDRNKRIKSKPERFQNCKDRFDLVVTCEERVYDQVVEGEDSPSQRGCDSNLKPLCC 140
Query: 165 ------QMISLEN---------------TPVHLINIDIQDNQEEATLGAFLASELMSMFI 203
++ L N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 141 CARHQPELTRLSNLCCSSDLNSREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIE 200
Query: 204 KCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEI+E++QEFEEK +RP LHT+ FY
Sbjct: 201 HTEDMENEIEELLQEFEEKSNRPFLHTVCFY 231
>gi|239789900|dbj|BAH71546.1| ACYPI005067 [Acyrthosiphon pisum]
Length = 178
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 146/214 (68%), Gaps = 41/214 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+ K+AVVCSSNMNRSMEAHA+LSKKG + +SFGTGDK
Sbjct: 4 SDFKIAVVCSSNMNRSMEAHAFLSKKGFNARSFGTGDK---------------------- 41
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA +KPN+YDF +Y+DIY+DL NKDK +YT+NGLL+
Sbjct: 42 -----------------VKLPGTAQEKPNIYDF-GCSYDDIYKDLYNKDKTYYTQNGLLN 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PE+FQE ++F ++ITCEERVYDQVLE+F+N ++S N PVH+INI+ Q
Sbjct: 84 MLDRNRRIKQHPERFQECNEQFTVVITCEERVYDQVLEYFEN-ILSFGNKPVHVININFQ 142
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIM 216
DN EEA +GAFL EL+++ + EDLDN+ID+++
Sbjct: 143 DNHEEARIGAFLICELVTLLSRSEDLDNDIDQLV 176
>gi|291234900|ref|XP_002737375.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog isoform
1 [Saccoglossus kowalevskii]
Length = 196
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 151/236 (63%), Gaps = 45/236 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+NLK+AVVCSSN NRSMEAH LSKKG +VKSFGTG
Sbjct: 2 NNLKIAVVCSSNQNRSMEAHGLLSKKGFNVKSFGTGTHV--------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD----KAFYTRN 118
+ G A DKPNVYDF TT YE +Y+DL +KD YT+N
Sbjct: 41 ------------------KLPGPAPDKPNVYDFQTT-YEQMYKDLEDKDINLYPPKYTQN 81
Query: 119 GLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
G+LHML+RN+RIK +PE+FQ SKDKFDI+ITCEERVYDQV+E F+++ + VH++N
Sbjct: 82 GILHMLDRNRRIKPRPERFQSSKDKFDIVITCEERVYDQVVEDFESREQETGQS-VHVLN 140
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IDIQDN EEATLGAF S+ +C DL+N+IDE++Q+FE K +R +LHT+ FY
Sbjct: 141 IDIQDNHEEATLGAFQILNFCSLIRECTDLENDIDELLQDFELKENRDILHTVCFY 196
>gi|301755340|ref|XP_002913512.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Ailuropoda melanoleuca]
Length = 198
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 144/233 (61%), Gaps = 47/233 (20%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVCSSN NRSMEAH L K+G V+SFGTG +
Sbjct: 10 LRVAVVCSSNQNRSMEAHNILKKRGFSVRSFGTGTQV----------------------- 46
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVYDF TT Y+ +Y+DL+ KDK YT+NG+LHML
Sbjct: 47 ----------------KLPGPAPDKPNVYDFKTT-YDQMYKDLVRKDKGLYTQNGILHML 89
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTP---VHLINIDI 181
+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E +IS E VH+IN+DI
Sbjct: 90 DRNKRIKPRPERFQNCKDIFDLILTCEERVYDQVVE----DLISREQETCQLVHVINVDI 145
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEATLGAFL EL ED DN+I+E++QEFEEK RP LHT FY
Sbjct: 146 QDNLEEATLGAFLICELCQCIQHIEDRDNDIEELLQEFEEKSGRPFLHTACFY 198
>gi|281347453|gb|EFB23037.1| hypothetical protein PANDA_001329 [Ailuropoda melanoleuca]
Length = 194
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 144/233 (61%), Gaps = 47/233 (20%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVCSSN NRSMEAH L K+G V+SFGTG +
Sbjct: 6 LRVAVVCSSNQNRSMEAHNILKKRGFSVRSFGTGTQV----------------------- 42
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVYDF TTY+ +Y+DL+ KDK YT+NG+LHML
Sbjct: 43 ----------------KLPGPAPDKPNVYDF-KTTYDQMYKDLVRKDKGLYTQNGILHML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTP---VHLINIDI 181
+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E +IS E VH+IN+DI
Sbjct: 86 DRNKRIKPRPERFQNCKDIFDLILTCEERVYDQVVE----DLISREQETCQLVHVINVDI 141
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QDN EEATLGAFL EL ED DN+I+E++QEFEEK RP LHT FY
Sbjct: 142 QDNLEEATLGAFLICELCQCIQHIEDRDNDIEELLQEFEEKSGRPFLHTACFY 194
>gi|219689264|pdb|3FDF|A Chain A, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689265|pdb|3FDF|B Chain B, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689266|pdb|3FDF|C Chain C, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689267|pdb|3FDF|D Chain D, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689299|pdb|3FMV|A Chain A, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689300|pdb|3FMV|B Chain B, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689301|pdb|3FMV|C Chain C, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689302|pdb|3FMV|D Chain D, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689303|pdb|3FMV|E Chain E, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689304|pdb|3FMV|F Chain F, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689305|pdb|3FMV|G Chain G, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689306|pdb|3FMV|H Chain H, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253
Length = 195
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 153/233 (65%), Gaps = 41/233 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAVVCSSN NRS EAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLAVAVVCSSNXNRSXEAHNFLAKKGFNVRSYGTGER--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLL
Sbjct: 43 ------------------VKLPGXAFDKPNVYEF-GTKYEDIYRDLESKDKEFYTQNGLL 83
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
H L+RN+RIK PE+FQ++K++FDII+T EERVYD V+ H ++ S++N PVH++N+D+
Sbjct: 84 HXLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVXHXESXE-SVDNRPVHVLNVDV 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+A GAF+ ++ ++ K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 143 VDNAEDALXGAFVITDXINXXAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
>gi|410988365|ref|XP_004000456.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Felis catus]
Length = 194
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 145/230 (63%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVC+SN NRSMEAH +LSK+G V+SFGTG
Sbjct: 6 LRVAVVCASNQNRSMEAHYFLSKRGFSVRSFGTGTHV----------------------- 42
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A D+PNVYDF TT Y+ +Y DL++KD+ YT+NG+LHML
Sbjct: 43 ----------------KLPGPAPDQPNVYDFQTT-YDQMYNDLVSKDRDLYTQNGMLHML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
ERNKRIK +PE+FQ +D FD+I+TCEE VYDQV+E N + PVH+IN+DI+DN
Sbjct: 86 ERNKRIKPRPERFQNCQDVFDLIVTCEESVYDQVVEDM-NSREQVTCQPVHVINVDIEDN 144
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEAT+GA L +L + ED+++E+DE++QEFEEK RP LHT+ FY
Sbjct: 145 DEEATVGAILICKLCQCIQRTEDMEDELDELLQEFEEKSGRPFLHTVCFY 194
>gi|444515407|gb|ELV10899.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
gi|444518690|gb|ELV12323.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 194
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 142/232 (61%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+VAVVCS+N NRSMEAH LSK+G V+SFGTG +
Sbjct: 4 STLRVAVVCSNNQNRSMEAHNLLSKRGFCVRSFGTGTRV--------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G A DKPNVYDFHTT Y+ +Y+DL+ KD+ YTRNG+LH
Sbjct: 43 ------------------KLPGPAPDKPNVYDFHTT-YDQMYKDLLRKDEKLYTRNGVLH 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML RNKRIK +PE+FQ D FD+I+TCEERVYDQV+EH N PVH++N+DI+
Sbjct: 84 MLGRNKRIKPRPERFQTCPDAFDLIVTCEERVYDQVVEHL-NSREQKTFQPVHVVNLDIK 142
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+Q+EA LGAF+ EL + EDL EI E++QE EEK R LHT+ FY
Sbjct: 143 DDQDEALLGAFVICELCQCVQRSEDLAKEIGELLQELEEKKGRTFLHTVCFY 194
>gi|395731329|ref|XP_003775879.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase SSU72 [Pongo abelii]
Length = 194
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 141/235 (60%), Gaps = 42/235 (17%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGT-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK Y + G
Sbjct: 41 -------------------HVKLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYPKMG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
LHML+RNKRIK +PE Q KD FD+I+TCEERVYDQV++ N PVH++N+
Sbjct: 81 FLHMLDRNKRIKPRPEXVQNCKDLFDLILTCEERVYDQVVKDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
>gi|431909736|gb|ELK12882.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 193
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 143/234 (61%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP +L+VAVVC SN NRSMEAH +L K+G V+SFGTG
Sbjct: 1 MPPSLRVAVVCWSNQNRSMEAHNFLGKRGFRVRSFGTGSHV------------------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + D+PNVYD+HTT YE +Y DL++KDK FYTR G+
Sbjct: 42 --------------------KLPGPSPDRPNVYDYHTT-YEQMYNDLVSKDKDFYTRKGI 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML RNKRIK +PE+FQ+ D FD+I+TC+ERVYD V+E + + VH+IN+D
Sbjct: 81 LHMLARNKRIKPRPERFQDCNDPFDLILTCDERVYDYVVEDLNAREQETFQL-VHVINVD 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
I DN+EEATLGAF+ +L K DLD+EI E++QEFEEK R LHT+ FY
Sbjct: 140 IPDNEEEATLGAFVICKLCQCLQKSLDLDDEISELLQEFEEKSGRTFLHTVCFY 193
>gi|354485443|ref|XP_003504893.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cricetulus griseus]
gi|344239934|gb|EGV96037.1| hypothetical protein I79_011960 [Cricetulus griseus]
Length = 194
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 144/235 (61%), Gaps = 42/235 (17%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS ++VAVVCSSN NRSMEAH LS++G +VKSFGT
Sbjct: 1 MPSVPIRVAVVCSSNHNRSMEAHRVLSQQGFNVKSFGTQG-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
F + G DKPN+Y FHT YE IY DLM KD+AFYT+NG
Sbjct: 41 -------------------FVRLPGPTPDKPNIYGFHTM-YEKIYCDLMKKDRAFYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RN+RIK PE+FQ SKD FD+I TCEE+VYDQV+EH + + L VH+IN+
Sbjct: 81 ILHMLDRNRRIKSSPEQFQSSKDLFDVIFTCEEKVYDQVVEHLNAREQGLSQL-VHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+I DN EEATLGAFL EL ED+D+EI E++Q+FE K + LHT+ FY
Sbjct: 140 NIPDNYEEATLGAFLILELCHSIQDMEDVDDEIAELLQKFEAKTGKTFLHTVCFY 194
>gi|395546024|ref|XP_003774894.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sarcophilus harrisii]
Length = 194
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 146/235 (62%), Gaps = 42/235 (17%)
Query: 1 MP-SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP S L++AVVCSSN NRSMEAH L K+G V+SFG+G +
Sbjct: 1 MPLSPLRLAVVCSSNQNRSMEAHNILLKRGFSVRSFGSGSRV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPN+YDF TT Y+ IY DL+ KDK YT+NG
Sbjct: 43 ---------------------KLPGPAPDKPNIYDFKTT-YDQIYNDLLKKDKKLYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML RNKRIK PE+FQ +D FD+I+TCEE+VYDQV+E+ ++ PVH++N+
Sbjct: 81 ILHMLNRNKRIKPGPERFQNCEDLFDLILTCEEKVYDQVVEYLTSREQET-CQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DI+D+QEEA LGAFL EL ED++NEIDE++QEFEEK ++ LHT+ FY
Sbjct: 140 DIKDDQEEAILGAFLICELCQCIQLTEDMENEIDELLQEFEEKSNKSFLHTVCFY 194
>gi|405958264|gb|EKC24409.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Crassostrea gigas]
Length = 175
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 142/216 (65%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
MEAH++LSK+G +V+SFGTG +
Sbjct: 1 MEAHSFLSKRGYNVRSFGTGSQV------------------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G +DKPN+YDF+TT Y+++Y+DLM KD YT+NG+LHML+RN+RIK PE+FQ
Sbjct: 24 --KLPGATLDKPNIYDFNTT-YDEMYRDLMRKDPELYTQNGILHMLDRNRRIKPMPERFQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
K+KF++IITCEERVYDQV+E F+ + + P H+INIDIQDN EEAT+GAFL S+L
Sbjct: 81 ACKEKFNVIITCEERVYDQVIEDFETREKE-DMQPAHIINIDIQDNHEEATIGAFLISDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+M + +DLDN+IDEI+Q+FE + RP+LHT+ FY
Sbjct: 140 ATMLFESDDLDNDIDEILQDFEPRARRPILHTVCFY 175
>gi|326932340|ref|XP_003212277.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like, partial [Meleagris gallopavo]
Length = 181
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 134/222 (60%), Gaps = 41/222 (18%)
Query: 13 SNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQ 72
SN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 SNQNRSMEAHNILSKRGFSVRSFGTGTHV------------------------------- 29
Query: 73 ISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKL 132
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK
Sbjct: 30 --------KLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKP 80
Query: 133 KPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGA 192
+PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGA
Sbjct: 81 RPERFQNCKDVFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGA 139
Query: 193 FLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
FL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 140 FLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 181
>gi|291407391|ref|XP_002719924.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog
[Oryctolagus cuniculus]
Length = 194
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 142/230 (61%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+VAVVCS+N NRSMEAH LSK+G +V+SFGTG +
Sbjct: 6 LRVAVVCSNNQNRSMEAHRILSKRGFNVRSFGTGAQV----------------------- 42
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A+DKPN YDF TTYE++Y DL+ KDK YT+NG+LHML
Sbjct: 43 ----------------KLPGPAIDKPNTYDF-KTTYEEMYNDLVRKDKILYTQNGILHML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+RIK PE+FQ KD FD+I TCEERVYDQV++ ++ PVH+IN+DIQD+
Sbjct: 86 DRNRRIKPHPERFQSCKDTFDLIFTCEERVYDQVVDCLTSREQET-CQPVHVINVDIQDS 144
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEAT+GAFL EL ED++NE++E++Q E+K R LHTI FY
Sbjct: 145 YEEATIGAFLICELCQGLQHTEDMENEMEELIQALEKKSGRAFLHTICFY 194
>gi|351713890|gb|EHB16809.1| hypothetical protein GW7_11296 [Heterocephalus glaber]
Length = 194
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 149/237 (62%), Gaps = 46/237 (19%)
Query: 1 MP-SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP S LKVAVVCS+N NRSMEAH L K+G +V+SFGTG
Sbjct: 1 MPGSPLKVAVVCSNNQNRSMEAHHILHKRGFNVRSFGTGTHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
I+G +DKPN+YDF TT YE IY+DL K+K FYT+NG
Sbjct: 43 ---------------------KISGQILDKPNIYDFQTT-YEQIYKDLTRKNKKFYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLI 177
+L ML+RNKRIK +PE+FQ D FD+I+TCEERVYDQV+E+ +++ ++T PVH+I
Sbjct: 81 VLGMLDRNKRIKPQPERFQNCTDLFDLILTCEERVYDQVVEYLNSRE---QDTCQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+DN EEA LG+FL +L ED+DNEI E+++E E+K S+ LHT+ FY
Sbjct: 138 NVDIKDNYEEAILGSFLICKLCQYIQLIEDVDNEIQEVLKEMEKKTSKTFLHTVCFY 194
>gi|156539561|ref|XP_001603042.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like, partial [Nasonia vitripennis]
Length = 167
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 138/208 (66%), Gaps = 41/208 (19%)
Query: 27 KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTA 86
KKG +VKSFGTGDK + G A
Sbjct: 1 KKGFNVKSFGTGDK---------------------------------------VKLPGNA 21
Query: 87 MDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDI 146
D+PN+YDF TTYE+IY DL+ KDK +YT+NGLLHML+RN+RIK+KPE+FQ SKD+FDI
Sbjct: 22 PDRPNIYDF-GTTYEEIYNDLLIKDKQYYTQNGLLHMLDRNRRIKVKPERFQLSKDRFDI 80
Query: 147 IITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCE 206
+ITCEERVYDQV+E +++ +N PVHLINIDIQDN EEAT+G+FL EL+S+ +
Sbjct: 81 LITCEERVYDQVIECMESRT-QEDNQPVHLINIDIQDNHEEATVGSFLICELVSVLANSD 139
Query: 207 DLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DLDN+IDE++ EFE K + +LHT+LFY
Sbjct: 140 DLDNDIDELLHEFESKFDKTILHTVLFY 167
>gi|156379803|ref|XP_001631645.1| predicted protein [Nematostella vectensis]
gi|156218689|gb|EDO39582.1| predicted protein [Nematostella vectensis]
Length = 193
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 146/234 (62%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
M LK+AVVCSSN NRSMEAH +LSK+G +VKS+G+G
Sbjct: 1 MVHKLKIAVVCSSNQNRSMEAHNFLSKRGFNVKSYGSGTH-------------------- 40
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A DKPN+Y F T Y+++Y+DL+ KD A YT+NG+
Sbjct: 41 -------------------VKLPGPAPDKPNIYTF-DTPYDEMYKDLLRKDSALYTQNGI 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK PE+FQE+ + FD+IIT EERVYDQV+EH + + + PVH++NID
Sbjct: 81 LHMLDRNRRIKALPERFQEAVEHFDLIITAEERVYDQVIEHLEG-LDAQSYKPVHVVNID 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
I DN EEATLGAFL E+ K D+++EI++++ +FE+K R +LH++ FY
Sbjct: 140 ILDNHEEATLGAFLICEICEAIEKLTDVEDEINDVVAKFEDKYKRNILHSVAFY 193
>gi|345789420|ref|XP_850372.2| PREDICTED: uncharacterized protein LOC608299 [Canis lupus
familiaris]
Length = 391
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 132/228 (57%), Gaps = 46/228 (20%)
Query: 7 VAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFH 66
VAVVCSS NRSME H L+K+G V+SFGTG
Sbjct: 210 VAVVCSSTQNRSMEVHKILNKRGFSVRSFGTGT--------------------------- 242
Query: 67 KVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLER 126
+ G A D+PNVYDF TT DL+ DK YT+NG+LHML++
Sbjct: 243 ------------HVKLPGPAPDRPNVYDFKTT------YDLLRTDKELYTQNGILHMLDK 284
Query: 127 NKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQE 186
NKRIK +PE+FQ +D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN E
Sbjct: 285 NKRIKPRPERFQNCRDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHE 343
Query: 187 EATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EATLGAFL L ED++NEIDE++QEFEEK R LH++ FY
Sbjct: 344 EATLGAFLICGLCQCIQHTEDMENEIDELLQEFEEKSGRAFLHSVGFY 391
>gi|195169957|ref|XP_002025780.1| GL18262 [Drosophila persimilis]
gi|194110633|gb|EDW32676.1| GL18262 [Drosophila persimilis]
Length = 221
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 152/230 (66%), Gaps = 42/230 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+V V ++++ S + H +L+KKG +V+S+GTG++
Sbjct: 34 LQVVTVRAASVPSS-KPHNFLAKKGFNVRSYGTGER------------------------ 68
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G DKPNVY+F T+YEDI++DL +KDK FYT+NGLLHML
Sbjct: 69 ---------------VKLPGMTFDKPNVYEF-GTSYEDIHRDLESKDKEFYTQNGLLHML 112
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+R+K PE+FQE+K+KFDII+T EERVYD V+ H ++ M S+ N PVH++N+D+ DN
Sbjct: 113 DRNRRLKKAPERFQETKEKFDIIVTVEERVYDLVVLHMES-MDSVYNRPVHVLNVDVVDN 171
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E+A +GAFL ++++++ K DLDN+IDE++QEFEE+ +R +LH++LFY
Sbjct: 172 AEDALMGAFLITDMINLLAKSNDLDNDIDEMIQEFEERRNRVILHSVLFY 221
>gi|332226178|ref|XP_003262265.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Nomascus leucogenys]
Length = 194
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 146/232 (62%), Gaps = 45/232 (19%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+V VVC SN N+SME H+ LSK+G V+SFG
Sbjct: 6 LRVVVVCWSNQNQSMETHSILSKRGFSVQSFGIARHV----------------------- 42
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A +KPN+YDF TT Y+++Y DL+ KDK FYT+NG+L ML
Sbjct: 43 ----------------KLPGPAPNKPNIYDFETT-YDEMYNDLITKDKEFYTQNGVLCML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQ 182
+RNKRIKL+PE+FQ+ KD FD+IITCEER+YDQV+E +++ ++T PVH++N+DIQ
Sbjct: 86 DRNKRIKLRPERFQDCKDVFDLIITCEERIYDQVVEDLNSRE---QDTCQPVHVLNMDIQ 142
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DNQE+A +GAFL EL + ED++NEID+++Q+ E+K + LHT+ FY
Sbjct: 143 DNQEDAIIGAFLICELCQCIQRSEDMENEIDQLLQKLEKKSDQAFLHTVCFY 194
>gi|126336762|ref|XP_001372227.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Monodelphis domestica]
Length = 195
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 141/231 (61%), Gaps = 42/231 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L++AVVCSSN NRSMEAH+ LS++G +V+SFG G K
Sbjct: 6 LRMAVVCSSNQNRSMEAHSLLSRRGFNVRSFGVGTKV----------------------- 42
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A DKPNVYDF TT Y +Y DL+ KD FYT +G+LHML
Sbjct: 43 ----------------RLPGPAPDKPNVYDFQTT-YSQMYNDLLRKDSKFYTHSGILHML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
RN+RIK +PE+FQ ++KFD+IITCEERVYD+V+ +++ PV++IN+DIQDN
Sbjct: 86 GRNQRIKPRPERFQNCQEKFDLIITCEERVYDKVVADLNSREPET-GQPVYVINVDIQDN 144
Query: 185 QEEATLGAFLASELMSMFIKCEDL-DNEIDEIMQEFEEKCSRPLLHTILFY 234
QEEA LGAFL EL E++ D +++E++QEFE S+ LHT+ FY
Sbjct: 145 QEEAILGAFLICELCECIELLEEVEDQDLEELLQEFERTTSKTFLHTVCFY 195
>gi|198424954|ref|XP_002128154.1| PREDICTED: similar to Ssu72-like protein [Ciona intestinalis]
Length = 192
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 145/234 (61%), Gaps = 42/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP L AVVCSSNMNRSMEAH +SK+G V+SFG+G++
Sbjct: 1 MPK-LSFAVVCSSNMNRSMEAHRCMSKRGYAVESFGSGNQV------------------- 40
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G++ D+PNVY F +T Y+DI DL KD+ YT+NG+
Sbjct: 41 --------------------KLPGSSADRPNVYSF-STKYDDILTDLKQKDRNLYTQNGV 79
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
L+ML+RN+RIK +P++FQ+ +FD+IIT EERVYDQ++E F N S VH+IN+D
Sbjct: 80 LNMLDRNRRIKDRPQRFQDYVGQFDVIITLEERVYDQIMEDF-NTRESETMEAVHVINLD 138
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IQDN EEAT+GAF+ EL +DLDN+IDE++Q+FEE+ R ++H++ FY
Sbjct: 139 IQDNHEEATIGAFVVCELSKKLEGSDDLDNDIDELLQDFEERSKRRIIHSVHFY 192
>gi|324523309|gb|ADY48226.1| RNA polymerase II subunit A C-terminal domain phosphatase [Ascaris
suum]
Length = 216
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 138/231 (59%), Gaps = 41/231 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ AV CSSNMNRSMEAH++L K+G +V+SFG+G +
Sbjct: 26 LRFAVSCSSNMNRSMEAHSFLQKRGFNVESFGSGSQV----------------------- 62
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + D+PN Y+F +Y+ IY DL +KD YT+NGLL+ML
Sbjct: 63 ----------------KLPGPSPDRPNCYEFGVASYDFIYNDLKSKDPQLYTQNGLLNML 106
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+RIK P+KFQ K KFD+II EERVYDQ+LE + S + VH+INIDIQDN
Sbjct: 107 DRNRRIKGMPQKFQHFKGKFDVIICLEERVYDQILEDLQTRE-SDDGDSVHVINIDIQDN 165
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEE-KCSRPLLHTILFY 234
EEAT+GA EL + CEDLDNEIDEI+ EFE+ R +LHTI FY
Sbjct: 166 HEEATIGALFVCELCAKLEACEDLDNEIDEILTEFEQNNPKRNILHTICFY 216
>gi|296479013|tpg|DAA21128.1| TPA: RNA polymerase II subunit A C-terminal domain phosphatase
SSU72 [Bos taurus]
Length = 173
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 130/214 (60%), Gaps = 42/214 (19%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG--------------------- 39
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 40 ------------------THVKLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH+IN+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEID 213
DIQDN EEATLGAFL EL ED++NEID
Sbjct: 140 DIQDNHEEATLGAFLICELCQCIQHTEDMENEID 173
>gi|312083477|ref|XP_003143878.1| hypothetical protein LOAG_08298 [Loa loa]
gi|307760956|gb|EFO20190.1| hypothetical protein LOAG_08298 [Loa loa]
Length = 197
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 136/231 (58%), Gaps = 41/231 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ AV CSSNMNRSMEAH++L K+G +V+SFG+G +
Sbjct: 7 LRFAVSCSSNMNRSMEAHSFLQKRGFNVESFGSGSQV----------------------- 43
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G D+PN YDF TY+ IY DL KD YT+NGLL+ML
Sbjct: 44 ----------------KLPGPTPDRPNCYDFGVATYDFIYNDLKQKDPQLYTQNGLLNML 87
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+RIK P+KFQ KFD+II EERVYDQ++E + + E VH+INIDIQDN
Sbjct: 88 DRNRRIKDMPQKFQHFNGKFDVIICLEERVYDQIVEDLQTRDTN-EGDSVHVINIDIQDN 146
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCS-RPLLHTILFY 234
EEAT+GA +L + CEDLDNEIDE++ EFE+ S R +LHTI FY
Sbjct: 147 HEEATIGALFVCDLCAKLEACEDLDNEIDEVLTEFEQNNSQRNILHTICFY 197
>gi|170573826|ref|XP_001892595.1| Ssu72-like protein [Brugia malayi]
gi|158601750|gb|EDP38570.1| Ssu72-like protein [Brugia malayi]
Length = 194
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 135/231 (58%), Gaps = 41/231 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ AV CSSNMNRSMEAH++L K+G V+SFG+G +
Sbjct: 4 LRFAVSCSSNMNRSMEAHSFLQKRGFSVESFGSGSQV----------------------- 40
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G D+PN YDF TY+ IY DL KD YT+NGLL+ML
Sbjct: 41 ----------------KLPGPTPDRPNCYDFGVATYDFIYNDLKQKDPQLYTQNGLLNML 84
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+RIK P+KFQ KFD+II EERVYDQ++E + + E VH+INIDIQDN
Sbjct: 85 DRNRRIKDMPQKFQHFSGKFDVIICLEERVYDQIVEDLQTRDTN-EGDSVHVINIDIQDN 143
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRP-LLHTILFY 234
EEAT+GA +L + CEDLDNEIDE++ EFE+ SR +LHTI FY
Sbjct: 144 HEEATIGALFVCDLCAKLEACEDLDNEIDEVLTEFEQNNSRRNILHTICFY 194
>gi|341880035|gb|EGT35970.1| hypothetical protein CAEBREN_08488 [Caenorhabditis brenneri]
Length = 197
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 141/233 (60%), Gaps = 41/233 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S ++ AV CSSNMNRSMEAH+ L K+G +++S+G+G +
Sbjct: 5 SKIRFAVSCSSNMNRSMEAHSILKKRGFNIESYGSGTQ---------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
I G +D+PN Y+F TTYEDIY DL+ KD FY +GLL+
Sbjct: 43 -----------------VKIPGPTIDRPNCYEFGPTTYEDIYSDLLKKDHQFYLTSGLLN 85
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
M++RN+RIK +P++FQ +FDI++ EERV+DQV++ F N+ I PVH+INIDI+
Sbjct: 86 MVDRNRRIKARPQRFQSETREFDIVLCLEERVFDQVVD-FLNRRIGSTGNPVHVINIDIE 144
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEE-KCSRPLLHTILFY 234
DN EEAT+GAF S+L + KC+D + EID+I+ + EE R LLHTI FY
Sbjct: 145 DNPEEATVGAFFVSDLCAKLEKCDDFEEEIDQIITDLEETNPKRNLLHTICFY 197
>gi|196007280|ref|XP_002113506.1| hypothetical protein TRIADDRAFT_26378 [Trichoplax adhaerens]
gi|190583910|gb|EDV23980.1| hypothetical protein TRIADDRAFT_26378 [Trichoplax adhaerens]
Length = 192
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 143/234 (61%), Gaps = 42/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP L A+VCSSN NRSM AH LSK+G +V SFG+G HC
Sbjct: 1 MPK-LDFAIVCSSNQNRSMAAHKLLSKRGFNVTSFGSG------------THC------- 40
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++PN+Y F ++Y+++Y DL KDK YT+NG+
Sbjct: 41 --------------------KLPGPTPEEPNIYSF-DSSYDEMYNDLTKKDKTLYTQNGI 79
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LHML+RN+RIK KPE+FQ+ K D +I+C+ERVYDQV+E F+N+ ++ TPVHLIN++
Sbjct: 80 LHMLDRNRRIKTKPERFQDCTVKHDCVISCDERVYDQVIEDFENRG-NVNGTPVHLINLN 138
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
I DNQEEAT+GA L EL +CEDLD+ I+ I++EFE+K R L + + FY
Sbjct: 139 IMDNQEEATIGAVLICELCQQIEECEDLDDNIENIIKEFEDKNKRTLYYHVAFY 192
>gi|221132596|ref|XP_002155087.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Hydra magnipapillata]
Length = 202
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 138/232 (59%), Gaps = 42/232 (18%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+AV CSSN NRSMEAH LSK+G +V+S+G+G
Sbjct: 12 DLKIAVTCSSNQNRSMEAHGVLSKRGFNVRSYGSGS------------------------ 47
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ + G DKPN+Y F+T Y+ +YQDL KD Y +NG+LHM
Sbjct: 48 ---------------YVKLPGPTADKPNIYHFNTP-YDQMYQDLARKDPILYKQNGILHM 91
Query: 124 LERNKRIKLKPEKFQESKD-KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+RIK PE+FQ+ K +FDIIIT EE+VYDQVLE F N+ PVH+INI+I
Sbjct: 92 LDRNRRIKRSPERFQDDKSSEFDIIITAEEKVYDQVLEEF-NRREPQSYRPVHIINIEIA 150
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEATLGAF EL K +DLD++I EI++E E K R +LHT+ FY
Sbjct: 151 DNHEEATLGAFQICELCEKLEKPDDLDDDIAEILEECERKFKRNILHTVAFY 202
>gi|157109750|ref|XP_001650808.1| phosphatase SSU72, putative [Aedes aegypti]
gi|108868411|gb|EAT32636.1| AAEL015160-PA, partial [Aedes aegypti]
Length = 166
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 129/199 (64%), Gaps = 41/199 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L +AV+CSSNMNRSMEAH +L+KK V+SFGTGDK
Sbjct: 7 SPLSIAVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDK---------------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA DKPN+YDF T+Y+DIY DL +KDK +YT+NGLLH
Sbjct: 45 -----------------VKLPGTAADKPNIYDF-GTSYDDIYTDLASKDKQYYTQNGLLH 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+++TCEERVYDQV+E +++ + N PVH+INIDIQ
Sbjct: 87 MLDRNRRIKPSPEKFQLCTERFDVLVTCEERVYDQVIEFMESKTPTY-NLPVHVINIDIQ 145
Query: 183 DNQEEATLGAFLASELMSM 201
DN EEAT+GAF +L++M
Sbjct: 146 DNHEEATVGAFAICDLITM 164
>gi|426240417|ref|XP_004014100.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Ovis aries]
Length = 357
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 207 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 265
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 266 DLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQC 324
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 325 IQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 357
>gi|115533947|ref|NP_495386.3| Protein SSUP-72 [Caenorhabditis elegans]
gi|351062358|emb|CCD70326.1| Protein SSUP-72 [Caenorhabditis elegans]
Length = 197
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 139/233 (59%), Gaps = 41/233 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+ AV CSSNMNRSMEAH L K+G +++S+G+G++
Sbjct: 5 SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQ---------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G +DKPN Y+F TTYEDIY DL NKD YT+NGLLH
Sbjct: 43 -----------------VKMPGPTVDKPNCYEFGPTTYEDIYADLTNKDLHLYTQNGLLH 85
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
M++RN+RIK +P++FQ +FDI++ EERV+DQV++ F N+ + PVH+INIDI+
Sbjct: 86 MVDRNRRIKSRPQRFQAETREFDIVLCLEERVFDQVVD-FLNRSVGKSGNPVHVINIDIE 144
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEE-KCSRPLLHTILFY 234
DN EEAT GAF ++L + ED + +ID+I+ + EE R LLHTI FY
Sbjct: 145 DNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEENNPKRNLLHTICFY 197
>gi|403297823|ref|XP_003939750.1| PREDICTED: uncharacterized protein LOC101032690 [Saimiri
boliviensis boliviensis]
Length = 499
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 349 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 407
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I+TCEERVYDQV+E N PVH++N+DIQDN EEATLGAFL EL
Sbjct: 408 DLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQC 466
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 467 IQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 499
>gi|308503188|ref|XP_003113778.1| CRE-SSUP-72 protein [Caenorhabditis remanei]
gi|308263737|gb|EFP07690.1| CRE-SSUP-72 protein [Caenorhabditis remanei]
Length = 197
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 139/234 (59%), Gaps = 41/234 (17%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L+ AV CSSNMNRSMEAH L K+G +++S+G+G +
Sbjct: 4 PSKLRFAVSCSSNMNRSMEAHLILKKRGFNIESYGSGTQ--------------------- 42
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G +DKPN Y+F TTY+DI+ DL NKDK Y +NGLL
Sbjct: 43 ------------------VKMPGPTIDKPNCYEFGPTTYDDIFADLTNKDKDLYRQNGLL 84
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
M++RN+RIK +P++FQ +FD+I+ EERV+DQV++ F N+ + PVH+INIDI
Sbjct: 85 FMVDRNRRIKTRPQRFQAETREFDVILCLEERVFDQVID-FLNRRVGTSGNPVHVINIDI 143
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEE-KCSRPLLHTILFY 234
+DN EEAT GAF +EL + K D + EID+I+ + EE + R LLHTI FY
Sbjct: 144 EDNAEEATFGAFFLAELCTKLEKSHDFEEEIDQIITDLEEAQPKRNLLHTICFY 197
>gi|7507774|pir||T16860 hypothetical protein T13C2.4 - Caenorhabditis elegans
Length = 1357
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 138/231 (59%), Gaps = 41/231 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+ AV CSSNMNRSMEAH L K+G +++S+G+G++
Sbjct: 43 SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQV--------------------- 81
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G +DKPN Y+F TTYEDIY DL NKD YT+NGLLH
Sbjct: 82 ------------------KMPGPTVDKPNCYEFGPTTYEDIYADLTNKDLHLYTQNGLLH 123
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
M++RN+RIK +P++FQ +FDI++ EERV+DQV++ F N+ + PVH+INIDI+
Sbjct: 124 MVDRNRRIKSRPQRFQAETREFDIVLCLEERVFDQVVD-FLNRSVGKSGNPVHVINIDIE 182
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEE-KCSRPLLHTIL 232
DN EEAT GAF ++L + ED + +ID+I+ + EE R LLHTIL
Sbjct: 183 DNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEENNPKRNLLHTIL 233
>gi|449487116|ref|XP_002188365.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Taeniopygia guttata]
Length = 242
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 92 LPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 150
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 151 DVFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQC 209
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 210 IQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 242
>gi|297469735|ref|XP_874866.3| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Bos taurus]
gi|297492521|ref|XP_002699640.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Bos taurus]
gi|296471216|tpg|DAA13331.1| TPA: Ssu72 RNA polymerase II CTD phosphatase homolog [Bos taurus]
Length = 194
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 133/230 (57%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L++AVVCSSN NRSMEAH LSK+G + SFGTG
Sbjct: 6 LRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTN------------------------ 41
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A D+PNVYDF Y+D+Y+DL+ KDK Y +NG+L ML
Sbjct: 42 ---------------MKLPGPARDRPNVYDFRAM-YDDVYKDLLRKDKERYMQNGVLRML 85
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
ERN +IK +PE+FQE KD FD+I+TCEERVYDQV+E N PVH+IN++I D
Sbjct: 86 ERNSQIKPRPERFQECKDLFDLILTCEERVYDQVVEDM-NSGEQETCQPVHVINVNILDT 144
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+EATLGAFL +L D+++ I E++Q FEEK R LHT+ FY
Sbjct: 145 NKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY 194
>gi|444731469|gb|ELW71822.1| Putative RNA polymerase II subunit A C-terminal domain phosphatase
SSU72-like protein 2 [Tupaia chinensis]
Length = 194
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 143/236 (60%), Gaps = 44/236 (18%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L++AVVC SN+NRSMEAH+ L KKG+ V+SFGT
Sbjct: 1 MPSSSLRLAVVCMSNINRSMEAHSMLRKKGISVRSFGTAS-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
F + GT +P VY+F TTY+++ DL+ KD+ FYT+NG
Sbjct: 41 -------------------FVKLPGTRRKRPVVYNF-ATTYKEMSDDLVRKDREFYTKNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEH-FDNQMISLENTPVHLIN 178
+LH+L RN+RIK PE+FQ+ D FD+I TCEE VYD+V+E+ + + + + PVH+IN
Sbjct: 81 ILHILGRNERIKPGPERFQDCTDPFDVIFTCEESVYDRVVEYLYSREQETFQ--PVHVIN 138
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DI+D QEEATLGAFL EL + ED+++ + +++ E EEK + LHT+ FY
Sbjct: 139 VDIKDTQEEATLGAFLIYELCQCLQQAEDMEDSVGKLLLEMEEKSGKSFLHTVCFY 194
>gi|313217069|emb|CBY38253.1| unnamed protein product [Oikopleura dioica]
gi|313233268|emb|CBY24383.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 141/230 (61%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L++AV+CSSNMNRSMEAH L KKG ++ S+GTG +
Sbjct: 13 LRIAVICSSNMNRSMEAHRLLEKKGYNISSYGTGTR------------------------ 48
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ GT+ D PNVY F +T Y +IY+DL KD+ Y +NG+L+ML
Sbjct: 49 ---------------VKLPGTSHDNPNVYAF-STPYNEIYEDLYRKDRNVYRQNGMLNML 92
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN++IK PEKFQ + D F++I++CEERVYDQ+L+ F N+ + T H+IN+DI DN
Sbjct: 93 DRNRKIKNHPEKFQLNNDVFNVILSCEERVYDQILDDF-NKRKAKAFTQCHVINLDIPDN 151
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E+A +GA + S+L+ IK DLD IDE++Q FEE+ R L+H+++FY
Sbjct: 152 HEDADIGAIVFSQLLDELIKDNDLDANIDELLQSFEEEKKRDLMHSVVFY 201
>gi|149719335|ref|XP_001500061.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Equus caballus]
Length = 194
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 143/238 (60%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L VAVVC SNMNRSMEAH+ L KKG V+SFGTG S+V
Sbjct: 1 MPSSPLMVAVVCKSNMNRSMEAHSILRKKGFSVRSFGTG--------SLV---------- 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ GTA D P VY+F TTTY+++Y DL+ +D+ YTRNG
Sbjct: 43 ---------------------RLPGTARDLPAVYNF-TTTYKEMYNDLLRRDRQHYTRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHL 176
+LH+LERN+RIK +PE+FQE ++ FD+I TC E +YD+V+E + + E PVH+
Sbjct: 81 ILHILERNQRIKPRPERFQECREAFDVIFTCGESIYDRVVE----DLCAREQETFQPVHV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IN+DIQD E+ATLGA L EL +D+++ +D+++ EEK + LHT+ FY
Sbjct: 137 INVDIQDTLEDATLGALLICELCQHLQHADDMEDSVDKLLLMVEEKRGKSFLHTVCFY 194
>gi|444712553|gb|ELW53474.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 175
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 126/216 (58%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
MEAH LSK+G V+SFGTG
Sbjct: 1 MEAHNILSKRGFSVRSFGTGTHV------------------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G A +KPNVYDF T Y +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ
Sbjct: 24 --KLPGPAPNKPNVYDF-KTIYGQMYNDLLKKDKELYTQNGILHMLDRNKRIKPRPERFQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
KD FD+I+TCEERVYDQV+E N PVH++N+DIQDN EEATLG+FL EL
Sbjct: 81 NCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNVDIQDNHEEATLGSFLICEL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QE EEK R LHT+ FY
Sbjct: 140 CQCIQHTEDMENEIDELLQELEEKSGRTFLHTVCFY 175
>gi|301778038|ref|XP_002924419.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Ailuropoda melanoleuca]
Length = 179
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ +
Sbjct: 29 LPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCR 87
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 88 DLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQC 146
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 147 IQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 179
>gi|281345099|gb|EFB20683.1| hypothetical protein PANDA_013776 [Ailuropoda melanoleuca]
Length = 168
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ +
Sbjct: 18 LPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCR 76
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 77 DLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQC 135
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 136 IQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 168
>gi|355557450|gb|EHH14230.1| hypothetical protein EGK_00115, partial [Macaca mulatta]
gi|355744843|gb|EHH49468.1| hypothetical protein EGM_00124, partial [Macaca fascicularis]
Length = 169
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 19 LPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 77
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I+TCEERVYDQV+E N PVH++N+DIQDN EEATLGAFL EL
Sbjct: 78 DLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQC 136
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 137 IQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 169
>gi|290561747|gb|ADD38271.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Lepeophtheirus salmonis]
Length = 193
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 148/234 (63%), Gaps = 41/234 (17%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
M +NLK+AV+CSSNMNRSMEAHA L KKG +V S+GTG+ H
Sbjct: 1 MGTNLKIAVICSSNMNRSMEAHALLGKKGFNVCSYGTGE------------HI------- 41
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
I G ++ PNVY F TTY IY DL+ KDK YT +G+
Sbjct: 42 --------------------KIPGKSLRDPNVYPF-GTTYTQIYDDLVKKDKKMYTESGM 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LH+L+RN+RIK +PEKFQ + +K+D+I+TCEERVYD VL F+++ + PVH+IN+D
Sbjct: 81 LHILDRNRRIKERPEKFQRTNNKYDVILTCEERVYDLVLLDFESREAA-HQQPVHIINMD 139
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
I DN E+AT+GAFL EL+ M + +D+D++IDEI+Q+FE K R LLH + FY
Sbjct: 140 IVDNPEDATIGAFLFYELVQMMVHSDDVDDDIDEIIQDFEVKSKRSLLHAVNFY 193
>gi|194387104|dbj|BAG59918.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 122/199 (61%), Gaps = 42/199 (21%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG--------------------- 39
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG
Sbjct: 40 ------------------THVKLPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASEL 198
DIQDN EEATLGAFL EL
Sbjct: 140 DIQDNHEEATLGAFLICEL 158
>gi|148683078|gb|EDL15025.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 264
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 121/199 (60%), Gaps = 42/199 (21%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 83 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGT-------------------- 122
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG
Sbjct: 123 -------------------HVKLPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNG 162
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ D FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 163 ILHMLDRNKRIKPRPERFQNCTDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 221
Query: 180 DIQDNQEEATLGAFLASEL 198
DIQDN EEATLGAFL EL
Sbjct: 222 DIQDNHEEATLGAFLICEL 240
>gi|16741452|gb|AAH16544.1| Ssu72 protein [Mus musculus]
Length = 182
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 121/199 (60%), Gaps = 42/199 (21%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGT-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG
Sbjct: 41 -------------------HVKLPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
+LHML+RNKRIK +PE+FQ D FD+I+TCEERVYDQV+E N PVH++N+
Sbjct: 81 ILHMLDRNKRIKPRPERFQNCTDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVVNV 139
Query: 180 DIQDNQEEATLGAFLASEL 198
DIQDN EEATLGAFL EL
Sbjct: 140 DIQDNHEEATLGAFLICEL 158
>gi|320168732|gb|EFW45631.1| Ssu72 protein [Capsaspora owczarzaki ATCC 30864]
Length = 203
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 142/243 (58%), Gaps = 52/243 (21%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLS-----------KKGVDVKSFGTGDKKPQQWESVVIF 51
+K AV+CSSN NRSMEAHA LS KKG DV S+G+G+
Sbjct: 2 GRVKYAVICSSNQNRSMEAHALLSHKTTLRLLYRRKKGFDVCSYGSGNN----------- 50
Query: 52 HCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD 111
+ G D+PNVY+F+T Y DIY +L +KD
Sbjct: 51 ----------------------------VKLPGPTPDQPNVYEFNTP-YNDIYAELASKD 81
Query: 112 KAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN 171
AFYT NG+L ML+RN++IK PE+F ++K FD+IITCEERV+DQVLE + + S
Sbjct: 82 NAFYTGNGILSMLDRNRKIKTAPERFADAKPLFDVIITCEERVFDQVLEVLEARD-SRTF 140
Query: 172 TPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTI 231
PVH+INIDI+DN EEAT+GA L ++ F + +DL+ +I+E++ EF+ K +R LLH+I
Sbjct: 141 RPVHIINIDIKDNHEEATVGAALIFKMCQAFDQADDLEVKIEEVLDEFQRKHARTLLHSI 200
Query: 232 LFY 234
FY
Sbjct: 201 AFY 203
>gi|114642178|ref|XP_001152448.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 141/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G D+P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPDRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ + E++ + E+K + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEKKAGKSFLHTVCFY 194
>gi|225708834|gb|ACO10263.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Caligus rogercresseyi]
Length = 203
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 147/232 (63%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+ LK+AV+CSSNMNRSMEAHA L KKG +V S+GTG+ H
Sbjct: 13 TGLKIAVICSSNMNRSMEAHALLGKKGFNVASYGTGE------------HI--------- 51
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
I G ++ PNVY F T+Y IY DL+ KDK YT +G+LH
Sbjct: 52 ------------------KIPGKSIRDPNVYPF-GTSYTQIYDDLVKKDKKMYTESGMLH 92
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+L+RN+RIK +PEKFQ ++ K+D+I+TCEERVYD VL F+++ + + PVH+IN+DI
Sbjct: 93 ILDRNRRIKERPEKFQRTEKKYDVILTCEERVYDLVLLDFESREPA-DQQPVHIINMDIV 151
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN E+AT+GAFL EL+ M + +D+D++IDEI+Q+FE K R LLH + FY
Sbjct: 152 DNPEDATIGAFLFYELVQMMVHSDDVDDDIDEIIQDFEVKSKRSLLHAVNFY 203
>gi|332224333|ref|XP_003261322.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Nomascus
leucogenys]
Length = 194
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 140/235 (59%), Gaps = 43/235 (18%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESRV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G D P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGPRPDCPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINI 179
LH+LERN+RIK PE+FQE D FD+I TCEERVYD V+E + +L+ PVH+IN+
Sbjct: 82 LHILERNERIKPGPERFQECTDFFDVIFTCEERVYDTVVEDLCSREQQTLQ--PVHVINM 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DI+D EEAT+GAFL E+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 140 DIEDTLEEATMGAFLICEICQCLQQSDDMEDSLGELLLQMEEKAGKSFLHTVCFY 194
>gi|332862947|ref|XP_001152323.2| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 140/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G D+P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPDRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVCFY 194
>gi|268530596|ref|XP_002630424.1| Hypothetical protein CBG11149 [Caenorhabditis briggsae]
Length = 197
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 136/233 (58%), Gaps = 41/233 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+ AV CSSNMNRSMEAH L K+G +++S+G+G +
Sbjct: 5 SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGTQV--------------------- 43
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPN Y+F TTYE+I+QDL KD Y +NGLL
Sbjct: 44 ------------------KMPGPSIDKPNCYEFGATTYEEIHQDLSAKDPLLYQQNGLLS 85
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
M++RN+RIK +P++FQ +FDI++ EERV+DQV++ F N+ + PVH+INIDI+
Sbjct: 86 MVDRNRRIKPRPQRFQAETREFDIVLCLEERVFDQVVD-FLNRRVGTSGNPVHVINIDIE 144
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEK-CSRPLLHTILFY 234
DN EEAT GAF +++ + D D EID+I+ + E+ R LLHTI FY
Sbjct: 145 DNPEEATFGAFFLADMCQKLEQSVDCDEEIDQIITDLEDSNPKRNLLHTICFY 197
>gi|74221876|dbj|BAE28662.1| unnamed protein product [Mus musculus]
Length = 148
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 110/149 (73%), Gaps = 2/149 (1%)
Query: 86 AMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFD 145
A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ D FD
Sbjct: 2 APDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCTDLFD 60
Query: 146 IIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKC 205
+I+TCEERVYDQV+E N PVH++N+DIQDN EEATLGAFL EL
Sbjct: 61 LILTCEERVYDQVVEDL-NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHT 119
Query: 206 EDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 120 EDMENEIDELLQEFEEKSGRAFLHTVCFY 148
>gi|114635778|ref|XP_001160061.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 139/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G +P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVCFY 194
>gi|440905151|gb|ELR55574.1| hypothetical protein M91_15723, partial [Bos grunniens mutus]
Length = 209
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 133/242 (54%), Gaps = 53/242 (21%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L++AVVCSSN NRSMEAH LSK+G + SFGTG
Sbjct: 9 LRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTN------------------------ 44
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A D+PNVYDF Y+D+Y+DL+ KDK Y +NG+L ML
Sbjct: 45 ---------------MKLPGPARDRPNVYDFRAM-YDDVYKDLLRKDKELYMQNGVLRML 88
Query: 125 ERN------------KRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT 172
ERN +IK +PE+FQE KD FD+I+TCEERVYDQV+E N
Sbjct: 89 ERNMEKEMATHSIHGSQIKPRPERFQECKDLFDLILTCEERVYDQVVEDM-NSGEQETCQ 147
Query: 173 PVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTIL 232
PVH+IN++I D +EATLGAFL +L D+++ I E++Q FEEK R LHT+
Sbjct: 148 PVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDGIGELLQAFEEKSGRSFLHTVC 207
Query: 233 FY 234
FY
Sbjct: 208 FY 209
>gi|114642191|ref|XP_001152962.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 139/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHHPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVCFY 194
>gi|426245021|ref|XP_004016314.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
Length = 194
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 134/234 (57%), Gaps = 45/234 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L+VAVVC SNMNRSMEAH+ L KKG V+SFG G +
Sbjct: 4 SSLRVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSRV--------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA + P VYDF +TTYE + +DL+ D+ YT NG+LH
Sbjct: 43 ------------------RLPGTARNLPVVYDF-STTYEQMRKDLVRIDRERYTSNGILH 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINID 180
+L RN+RIK PE+FQE +D+FD+I TCEE VYD+V+E + + T PVH+IN+D
Sbjct: 84 ILGRNERIKPCPERFQECRDRFDVIFTCEESVYDRVIEEL---WVREQETCQPVHVINVD 140
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ DN E+ATLG+ + EL + ED++ + E++ E K R LHT+ FY
Sbjct: 141 MDDNTEDATLGSLIICELCEHLQQAEDMEGSLAELLLAVERKTGRSFLHTVCFY 194
>gi|440893073|gb|ELR45984.1| hypothetical protein M91_11038 [Bos grunniens mutus]
Length = 194
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 135/234 (57%), Gaps = 45/234 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S LKVAVVC SNMNRSMEAH+ L KKG V+SFG G +
Sbjct: 4 SPLKVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSRV--------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA + P VYDF +TTYE +++DL+ D+ YT NG+LH
Sbjct: 43 ------------------RLPGTARNLPVVYDF-STTYEQMHKDLVRIDRERYTSNGILH 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINID 180
+L RN+RIK +PE+FQE +D+FD+I TCEE VYD+V+E + + T PV++IN++
Sbjct: 84 ILGRNERIKPRPERFQECRDRFDVIFTCEESVYDRVIEEL---WVREQETCQPVYVINVN 140
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ DN E+ATLG+ + EL + ED++ + E++ E K R LHT+ FY
Sbjct: 141 MDDNTEDATLGSLIICELCERLQQAEDMEGSLAELLLAVERKTGRSFLHTVCFY 194
>gi|114695211|ref|XP_001170092.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 139/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G +P VYDF TTY+++Y DL+ D+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHRPIVYDF-ATTYKEMYNDLLRNDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVCFY 194
>gi|296479875|tpg|DAA21990.1| TPA: Ssu72 RNA polymerase II CTD phosphatase homolog [Bos taurus]
Length = 194
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 134/234 (57%), Gaps = 45/234 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S LKVAVVC SNMNRSMEAH+ L KKG V+SFG G +
Sbjct: 4 SPLKVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSRV--------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GTA + P VYDF +TTYE + +DL+ D+ YT NG+LH
Sbjct: 43 ------------------RLPGTARNLPVVYDF-STTYEQMRKDLVRIDRERYTSNGILH 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINID 180
+L RN+RIK +PE+FQE +D+FD+I TCEE VYD+V+E + + T PV++IN++
Sbjct: 84 ILGRNERIKPRPERFQECRDRFDVIFTCEESVYDRVIEEL---WVREQETCQPVYVINVN 140
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ DN E+ATLG+ + EL + ED++ + E++ E K R LHT+ FY
Sbjct: 141 MDDNTEDATLGSLIICELCERLQQAEDMEGSLAELLLAVERKTGRSFLHTVCFY 194
>gi|440889193|gb|ELR44621.1| hypothetical protein M91_16259, partial [Bos grunniens mutus]
Length = 197
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 135/234 (57%), Gaps = 45/234 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S LKVAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 7 SPLKVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSR---------------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
++ G A + P VYDF +TTYE++ +DL+ KD+ Y NG+LH
Sbjct: 45 -----------------VTLPGAARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNGILH 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINID 180
+L RN+RIK +PE+FQE +D+FD+I TCEE VYD+V+E + + T PVH+IN+D
Sbjct: 87 ILGRNERIKPRPERFQECRDRFDVIFTCEESVYDKVVEEL---WVREQETFQPVHVINVD 143
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ DN E+ATLG+ + EL + ++L++ + E++ E K + LHT+ FY
Sbjct: 144 MADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKSFLHTVCFY 197
>gi|340382199|ref|XP_003389608.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Amphimedon queenslandica]
Length = 194
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 143/233 (61%), Gaps = 43/233 (18%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+L+ AVVCSSN NRSMEAH L+K+G +VKS+G G SVV
Sbjct: 3 SLRFAVVCSSNQNRSMEAHHLLNKRGYNVKSYGIG--------SVV-------------- 40
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G + ++P +Y F TTYED+YQDL +D YT+NG+L M
Sbjct: 41 -----------------KLPGASANEPIIYPF-GTTYEDMYQDLYQRDPHLYTQNGILQM 82
Query: 124 LERNKRIKLKPEKFQES-KDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+RIK PE+FQE+ +DKF+II T E+++D V++ +++ + +PVH+INI+IQ
Sbjct: 83 LDRNRRIKPSPERFQEATEDKFNIIFTVGEKIFDTVIDDIESRGPQIY-SPVHVININIQ 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEK-CSRPLLHTILFY 234
DN +EAT G+FL E+ M EDLDNEI+ I+ EFE K +R +LH+I FY
Sbjct: 142 DNLDEATFGSFLFCEMCEMMSDSEDLDNEIELILLEFEAKHTTRTVLHSITFY 194
>gi|114636088|ref|XP_001160103.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 138/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHRTVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVCFY 194
>gi|440913624|gb|ELR63052.1| hypothetical protein M91_07835 [Bos grunniens mutus]
Length = 194
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%), Gaps = 46/237 (19%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L VAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYPLSVAVVCMSNMNRSMEAHCILRRKGFRVRSFGAGSR------------------- 41
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P VYDF +TTYE++ +DL+ KD+ Y NG
Sbjct: 42 --------------------VRLPGRARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLI 177
+LH+L RN+RIK +PE+FQE +D+FD+I TCEE VYD+V+E + + T PVH+I
Sbjct: 81 ILHILGRNERIKPRPERFQECRDRFDVIFTCEESVYDKVVEEL---WVREQETFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+D+ DN E+ATLG+ + EL + ++L++ + E++ E K + LHT+ FY
Sbjct: 138 NVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKSFLHTVCFY 194
>gi|114642201|ref|XP_001153255.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 142/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G D+P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPDRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|296479880|tpg|DAA21995.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%), Gaps = 46/237 (19%)
Query: 1 MPSNL-KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L VAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYLLSVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSR------------------- 41
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P VYDF +TTYE++ +DL+ KD+ Y NG
Sbjct: 42 --------------------VRLPGRARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLI 177
+LH+L RN+RIK +PE+FQE +D+FD+I TCEE VYD+V+E + + T PVH+I
Sbjct: 81 ILHILGRNERIKPRPERFQECRDRFDVIFTCEESVYDRVVEEL---WVREQETFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+D+ DN E+ATLG+ + EL + ++L++ + E++ E K + LHT+ FY
Sbjct: 138 NVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKSFLHTVCFY 194
>gi|296479842|tpg|DAA21957.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%), Gaps = 46/237 (19%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L VAVVC+SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYPLSVAVVCTSNMNRSMEAHRILRRKGFRVRSFGAGSR------------------- 41
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P VYDF +TTYE++ +DL+ KD Y NG
Sbjct: 42 --------------------VRLPGRARNLPVVYDF-STTYEEMRKDLVRKDGQRYNSNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLI 177
+LH+L RN+RIK +PE+FQE +D+FD+I TCEE VYD+V+E + + T PVH+I
Sbjct: 81 ILHILGRNERIKPRPERFQECRDRFDVIFTCEESVYDKVVEEL---WVREQETFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+D+ DN E+ATLG+ + EL + ++L++ + E++ E K + LHT+ FY
Sbjct: 138 NVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKSFLHTVCFY 194
>gi|432099601|gb|ELK28738.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Myotis davidii]
Length = 194
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 137/235 (58%), Gaps = 47/235 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+ L+VAVVCSSN NRSMEAH LS+KG V+SFGTG
Sbjct: 4 AQLRVAVVCSSNQNRSMEAHYLLSQKGFAVRSFGTGSHV--------------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G A DKPNVYD+ +TTY+ IY+DL KD Y RNG+L
Sbjct: 43 ------------------RLLGPAPDKPNVYDY-STTYDAIYRDLRRKDPELYARNGVLR 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQV---LEHFDNQMISLENTPVHLINI 179
ML+RN+ IKL+PE+F ++ FD+I+TCEERVYDQV L + + + L VH++N+
Sbjct: 84 MLQRNRAIKLRPEQFASCQEPFDLILTCEERVYDQVVLELTAREQETMQL----VHVVNV 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+IQDN EA LGAFL EL +D+D+++ E++ EFEE +P LHT+ FY
Sbjct: 140 NIQDNYREAHLGAFLLCELCQCVSLLDDVDSDLAELLLEFEEHSGQPFLHTVCFY 194
>gi|296479876|tpg|DAA21991.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 46/237 (19%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L VAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYPLSVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P VYDF +TTYE++ +DL+ KD+ Y NG
Sbjct: 43 ---------------------RLPGRARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLI 177
+LH+L RN+RIK +PE+FQE +D+FD+I TC E VYD+V+E + + T PVH+I
Sbjct: 81 ILHILGRNERIKPRPERFQECRDRFDVIFTCAESVYDRVVEEL---WVREQETFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+D+ DN E+ATLG+F+ EL + ++L++ + +++ E K + LHT+ FY
Sbjct: 138 NVDMADNAEDATLGSFIICELCERLQQADNLEDSLVQVLLAAESKTGKSFLHTVCFY 194
>gi|114642181|ref|XP_001152517.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 141/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G D+P VYDF TTY+++Y DL+ D+ YTRNG+
Sbjct: 43 --------------------RLPGPRPDRPVVYDF-ATTYKEMYNDLLRNDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|114642195|ref|XP_001153086.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 141/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G +P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL SE+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|313216548|emb|CBY37838.1| unnamed protein product [Oikopleura dioica]
Length = 179
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 131/220 (59%), Gaps = 41/220 (18%)
Query: 15 MNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQIS 74
MNRSMEAH L KKG ++ S+GTG +
Sbjct: 1 MNRSMEAHRLLEKKGYNISSYGTGTR---------------------------------- 26
Query: 75 VNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKP 134
+ GT+ D PNVY F +T Y +IY+DL KD+ Y +NG+L+ML+RN++IK P
Sbjct: 27 -----VKLPGTSHDNPNVYAF-STPYNEIYEDLYRKDRNVYRQNGMLNMLDRNRKIKNHP 80
Query: 135 EKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFL 194
EKFQ + D F++I++CEERVYDQ+L+ F N+ + T H+IN+DI DN E+A +GA +
Sbjct: 81 EKFQLNNDVFNVILSCEERVYDQILDDF-NKRKAKAFTQCHVINLDIPDNHEDADIGAIV 139
Query: 195 ASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
S+L+ IK DLD IDE++Q FEE+ R L+H+++FY
Sbjct: 140 FSQLLDELIKDNDLDANIDELLQSFEEEKKRDLMHSVVFY 179
>gi|426367055|ref|XP_004050552.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Gorilla gorilla
gorilla]
Length = 194
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 141/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRERYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKAGPERFQECTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D++++++E++ + EEK + LHTI FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDDLEELLLQMEEKAGKSFLHTICFY 194
>gi|119622990|gb|EAX02585.1| hCG1991759, isoform CRA_a [Homo sapiens]
Length = 194
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 140/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRERYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDSFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|114642198|ref|XP_001153201.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 140/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G +P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDIEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|114642183|ref|XP_001152650.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
gi|114642189|ref|XP_001152902.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 140/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G +P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPHRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQ+ D FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQDCTDFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|426367051|ref|XP_004050550.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Gorilla gorilla
gorilla]
Length = 194
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 141/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D++++++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDDLEELLLQMEEKAGKSFLHTVCFY 194
>gi|190360258|sp|A6NK39.1|S72L1_HUMAN RecName: Full=Putative RNA polymerase II subunit A C-terminal
domain phosphatase SSU72-like protein 1; Short=CTD
phosphatase SSU72-like protein 1
Length = 194
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 139/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+ +Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKQMYNDLLRKDRERYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDSFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDIEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|426367053|ref|XP_004050551.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Gorilla gorilla
gorilla]
Length = 194
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 141/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRERYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DIQD E+ATLGAFL E+ + +D++++++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIQDTLEDATLGAFLICEICQCLQQSDDMEDDLEELLLQMEEKAGKSFLHTVCFY 194
>gi|190360259|sp|A8MSY0.1|S72L2_HUMAN RecName: Full=Putative RNA polymerase II subunit A C-terminal
domain phosphatase SSU72-like protein 2; Short=CTD
phosphatase SSU72-like protein 2
Length = 194
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 140/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L KKG+ V+SFGT ES V
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRKKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N++IQD E+ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMEIQDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|395814937|ref|XP_003780993.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Otolemur
garnettii]
Length = 194
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 134/238 (56%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L+VAVVC SN+NRSMEAH+ L KKG+ V+SFG +
Sbjct: 1 MPSAPLRVAVVCMSNINRSMEAHSMLRKKGLSVQSFGIASRV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G + +YDF T Y+++Y DL+ KD+ +YT G
Sbjct: 43 ---------------------RLPGPGPNFALIYDF-ATPYKEMYNDLLRKDREYYTGTG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHL 176
LLH+L RN+RIK +PE+FQE FD+I TCEERVYD+V+ ++ S E PVH+
Sbjct: 81 LLHILGRNERIKPRPERFQECGASFDVIFTCEERVYDRVV----TELCSREQETFQPVHV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IN+DI D+ E AT GAFL +L + +D+++ +DE++ + EEK + LHT+ FY
Sbjct: 137 INVDIVDDPESATCGAFLICQLCQALQQMDDMEDNMDELLLQAEEKTGKRFLHTVCFY 194
>gi|339233924|ref|XP_003382079.1| conserved hypothetical protein [Trichinella spiralis]
gi|316979009|gb|EFV61877.1| conserved hypothetical protein [Trichinella spiralis]
Length = 365
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 136/276 (49%), Gaps = 89/276 (32%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ +VVCSSNMNRSMEAHA L KKG +V+SFG+G +
Sbjct: 130 LRFSVVCSSNMNRSMEAHAMLQKKGFNVRSFGSGSQ------------------------ 165
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + N+Y F +T YE+IYQDL+ KDK YT+NGLL+ML
Sbjct: 166 ---------------VKLPGPSPTVHNIYSF-STPYEEIYQDLVAKDKNLYTQNGLLNML 209
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQ-------------VLEHFDNQMIS--- 168
+RN+R+K PE+FQE K D+II CEERVYDQ L D ++
Sbjct: 210 DRNRRVKPHPERFQEYKGLSDVIICCEERVYDQYARDNEVYILKSICLSCMDGLLLPDFV 269
Query: 169 ---------------------------LENTP------VHLINIDIQDNQEEATLGAFLA 195
L NT VH+INIDI+DN EEAT GA L
Sbjct: 270 KKPHILNKNADINVAINVEEQFSVIKILMNTEMKYCHLVHIINIDIRDNHEEATCGALLF 329
Query: 196 SELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTI 231
L ++ K DLDNEI+EI+ FE C R +LHT+
Sbjct: 330 CHLCTLLEKSADLDNEIEEILSNFENICKRTILHTL 365
>gi|296479878|tpg|DAA21993.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 134/237 (56%), Gaps = 46/237 (19%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L VAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYPLSVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P VY+F +TTYE++ +DL+ KD+ Y NG
Sbjct: 43 ---------------------RLPGRARNLPVVYNF-STTYEEMRKDLVRKDRQRYNSNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLI 177
+LH+L RN+RIK +PE+FQE +D FD+I TC E VY++V+E + + T PVH+I
Sbjct: 81 ILHILGRNERIKPRPERFQECRDHFDVIFTCAESVYNKVVEEL---WVREQETFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+D+ DN E+ATLG+F+ EL + ++L++ + +++ E K + LHT+ FY
Sbjct: 138 NVDMADNLEDATLGSFIICELCERLQQADNLEDSLVQVLLAAESKTGKSFLHTVCFY 194
>gi|332266759|ref|XP_003282365.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Nomascus
leucogenys]
gi|332266761|ref|XP_003282366.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Nomascus
leucogenys]
Length = 194
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 140/237 (59%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ LS+KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILSRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E+ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIEDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
>gi|402855890|ref|XP_003892544.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Papio anubis]
Length = 195
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 138/233 (59%), Gaps = 43/233 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+LKVAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 5 SSLKVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESNV------------- 43
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G +P VYDF TY+++Y DL+ KD+ YT NG+LH
Sbjct: 44 ------------------RLPGPRPGRPVVYDF-AATYKEMYNDLVRKDRECYTHNGILH 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDI 181
+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + +L+ PVH+IN+DI
Sbjct: 85 ILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVEDLCSREQQTLQ--PVHVINMDI 142
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D E+ATLGAFL EL + +D+++ ++E++ + EEK R LHT+ FY
Sbjct: 143 KDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSGRSFLHTVCFY 195
>gi|109083620|ref|XP_001082455.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Macaca mulatta]
Length = 194
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 137/233 (58%), Gaps = 43/233 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 4 SSLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESHV------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G P VYDF TTY+++Y DL+ KD+ YT NG+LH
Sbjct: 43 ------------------RLPGPRPGHPVVYDF-ATTYKEMYNDLLRKDRECYTCNGILH 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDI 181
+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + +L+ PVH+IN DI
Sbjct: 84 ILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVEDLCSREQQTLQ--PVHVINTDI 141
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D E+ATLGAFL EL + +D+++ ++E++ + EEK R LHT+ FY
Sbjct: 142 KDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSGRSFLHTVCFY 194
>gi|395518385|ref|XP_003763342.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Sarcophilus harrisii]
Length = 131
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 103 IYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF 162
+Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E
Sbjct: 1 MYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL 60
Query: 163 DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEK 222
N PVH+IN+DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK
Sbjct: 61 -NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEK 119
Query: 223 CSRPLLHTILFY 234
SR LHT+ FY
Sbjct: 120 SSRTFLHTVCFY 131
>gi|149719339|ref|XP_001500904.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Equus caballus]
Length = 194
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ LKVAVVC SN+NRSMEA + L KKG V SFG G +
Sbjct: 1 MPSSPLKVAVVCMSNINRSMEAQSILRKKGFSVWSFGAGSQV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P VY+F +TTY+++Y DL+ KD+ Y RNG
Sbjct: 43 ---------------------RLPGDAPNLPVVYNF-STTYKEMYNDLLRKDRQHYIRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHL 176
+LH+L RN+RIK +PE+FQE + FD+I TC E +YD+V+E + + E PVH+
Sbjct: 81 ILHILRRNERIKPQPERFQECLEAFDVIFTCGESIYDRVVE----DLCAREQETFQPVHV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
IN+DIQD E+ATLGA L EL +D+++ + +++ EEK + LH + FY
Sbjct: 137 INVDIQDTLEDATLGALLICELCQRLQHADDVEDSLAKLLLAVEEKRGKSFLHMVFFY 194
>gi|332868512|ref|XP_527875.2| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Pan troglodytes]
Length = 194
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGRRRNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE + FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVME----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
>gi|297681396|ref|XP_002818444.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Pongo abelii]
Length = 194
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 139/235 (59%), Gaps = 43/235 (18%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC+SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCASNINRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGRRPNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINI 179
LH+LERN+RIK PE+FQE D FD+I TCEE VYD V+E + +L+ PVH+IN+
Sbjct: 82 LHILERNERIKPGPERFQECTDFFDVIFTCEESVYDTVVEDLCSREQQTLQ--PVHVINM 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DI+D E A LGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 140 DIEDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
>gi|355558332|gb|EHH15112.1| hypothetical protein EGK_01160 [Macaca mulatta]
gi|355566818|gb|EHH23197.1| hypothetical protein EGK_06624 [Macaca mulatta]
Length = 194
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 138/235 (58%), Gaps = 43/235 (18%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S+L+VAVVC SN+NRSMEAH+ L +KG+ V+SFG ES V
Sbjct: 2 LSSSLRVAVVCVSNINRSMEAHSILRRKGLSVRSFG--------IESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G +P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGPRPGRPVVYDF-ATTYKEMYNDLLRKDRECYTCNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINI 179
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + +L+ PVH+IN
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVEDLCSREQQTLQ--PVHVINT 139
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DI+D E+ATLGAFL EL + +D+++ ++E++ + EEK R LHT+ FY
Sbjct: 140 DIKDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSGRSFLHTVCFY 194
>gi|397488952|ref|XP_003815505.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Pan paniscus]
Length = 194
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGRRRNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE + FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
>gi|426357743|ref|XP_004046193.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Gorilla gorilla
gorilla]
Length = 194
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGRRPNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE + FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E ATLGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
>gi|431922663|gb|ELK19583.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 131
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 103 IYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF 162
+Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E
Sbjct: 1 MYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL 60
Query: 163 DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEK 222
N PVH+IN+DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK
Sbjct: 61 -NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEK 119
Query: 223 CSRPLLHTILFY 234
R LHT+ FY
Sbjct: 120 SGRAFLHTVCFY 131
>gi|311263369|ref|XP_003129660.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sus scrofa]
Length = 195
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 131/236 (55%), Gaps = 43/236 (18%)
Query: 1 MPSN--LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCS 58
MPS+ L+VAVVC SNMNRSMEAH+ LSKKG V+SFG G S+V
Sbjct: 1 MPSSAPLRVAVVCMSNMNRSMEAHSILSKKGFRVRSFGAG--------SMV--------- 43
Query: 59 ELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRN 118
+ G A +P +Y F T Y + +DL D Y RN
Sbjct: 44 ----------------------RLPGPAHHRPVLYSFRTP-YRQMRRDLAWLDPDCYRRN 80
Query: 119 GLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
G+LH+L RN+RIK PE+FQ+ ++ FD+I TCEE VYD+V+ H + PVH+IN
Sbjct: 81 GILHLLGRNERIKPCPERFQDCREAFDVIFTCEESVYDRVVGHLCAREQE-TCQPVHVIN 139
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D+QD+ E+ATLG+ + EL + ED+++ + E++ E K R LHT+ FY
Sbjct: 140 VDMQDDLEDATLGSLVICELCQRLQQAEDMEDCLAELLLGVERKTGRSFLHTVCFY 195
>gi|355778588|gb|EHH63624.1| hypothetical protein EGM_16631 [Macaca fascicularis]
Length = 194
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 136/233 (58%), Gaps = 43/233 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+L+VAVVC SN+NRSMEAH+ L +KG+ V+SFG ES V
Sbjct: 4 SSLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGI--------ESHV------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G P VYDF TTY+++Y DL+ KD+ YT NG+LH
Sbjct: 43 ------------------RLPGPRPGHPVVYDF-ATTYKEMYNDLLRKDRECYTCNGILH 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDI 181
+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + +L+ PVH+IN DI
Sbjct: 84 ILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVEDLCSREQQTLQ--PVHVINTDI 141
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D E+ATLGAFL EL + +D+++ ++E++ + EEK R LHT+ FY
Sbjct: 142 KDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSGRSFLHTVCFY 194
>gi|205829941|sp|A6NG73.2|S72L3_HUMAN RecName: Full=Putative RNA polymerase II subunit A C-terminal
domain phosphatase SSU72-like protein 3; Short=CTD
phosphatase SSU72-like protein 3
gi|119604018|gb|EAW83612.1| hCG1651160 [Homo sapiens]
Length = 194
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 137/237 (57%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGRRPNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE + FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E A LGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIKDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
>gi|393215469|gb|EJD00960.1| phospho protein phosphatase [Fomitiporia mediterranea MF3/22]
Length = 302
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 128/226 (56%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
+VC+SN NRSME H+ LSK G V S GTG S V
Sbjct: 118 IVCASNNNRSMEGHSVLSKAGFHVVSSGTG--------SAV------------------- 150
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++DKPN+Y F T Y +Y++L +KD YT NG+L+M++RN+
Sbjct: 151 ------------RLPGPSIDKPNIYAF-GTPYNTMYEELNSKDPRLYTVNGILNMIDRNR 197
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+IKL PE++QES++ D++ITCEER YD V + ++ N PVH+INI+I+DN EEA
Sbjct: 198 KIKLAPERWQESRNVADVVITCEERCYDAVCDDLLSKGGEY-NRPVHVINIEIKDNHEEA 256
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +DLD +I +I++E +EK PLLHT+ FY
Sbjct: 257 LIAGKAMLDLATAIEASDDLDEDIGKILEEQQEKHPHPLLHTVAFY 302
>gi|51095084|gb|EAL24327.1| similar to RIKEN cDNA 1500011L16 [Homo sapiens]
Length = 194
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 137/237 (57%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGRRPNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE + FD+I TCEERVYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E A LGAFL E+ + +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 138 NMDIKDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
>gi|297689569|ref|XP_002822219.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Pongo abelii]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 136/237 (57%), Gaps = 47/237 (19%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+N+SMEAH+ L +KG++V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCMSNVNKSMEAHSILRRKGLNVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G P VYDF TTY+++Y DL+ KD+ YT NG+
Sbjct: 43 --------------------RLPGPRPGHPVVYDF-ATTYKEMYNDLLRKDRERYTHNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH+I
Sbjct: 82 LHILGRNERIKPGPERFQECTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVI 137
Query: 178 NIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N+DI+D E+AT GAFL E+ + +D+D+ ++E++ EEK + LHT+ FY
Sbjct: 138 NMDIEDTLEDATRGAFLICEICQCLQQSDDMDDNLEELLLLMEEKAGKSFLHTVCFY 194
>gi|409050135|gb|EKM59612.1| hypothetical protein PHACADRAFT_250223 [Phanerochaete carnosa
HHB-10118-sp]
Length = 246
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 119/226 (52%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H LSK G V S+GTG S V
Sbjct: 62 VVCASNQNRSMEGHYVLSKAGHRVISYGTG--------SAV------------------- 94
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G A+DKPN+Y F T Y IY++L +D YT NGLL ML+RN+
Sbjct: 95 ------------RLPGPAIDKPNIYPF-GTPYNQIYEELQEQDPRLYTANGLLQMLDRNR 141
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
R+KL PE++QESK DI+ITCEER +D V + + N PVH++NI+I+DN EEA
Sbjct: 142 RLKLAPERWQESKAVADIVITCEERCFDAVCDDLLARGGDF-NKPVHIVNIEIKDNHEEA 200
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+L + D+D EID I+Q +EK LLH + +Y
Sbjct: 201 HFAGKAIVDLAAAIEAANDIDEEIDAILQAHQEKHPHSLLHAVAYY 246
>gi|403412459|emb|CCL99159.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 124/229 (54%), Gaps = 43/229 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H LSK G V S+GTG S V
Sbjct: 102 VVCASNQNRSMEGHYVLSKAGYRVVSYGTG--------SAV------------------- 134
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G A+DKPN+Y F T Y D+Y++L +D YT NGLL ML+RN+
Sbjct: 135 ------------RLPGPAIDKPNIYPF-GTPYNDMYEELQGQDPRLYTANGLLQMLDRNR 181
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLE---NTPVHLINIDIQDNQ 185
R+KL PE++Q+S+ D++ITCEER +D V + +++ N PVH+INI+I+DN
Sbjct: 182 RLKLAPERWQDSRTVADVVITCEERCFDAVAKRRFADLLARGGDFNKPVHVINIEIKDNH 241
Query: 186 EEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEA + +L + D+D ++D+I+Q +EK LLH + +Y
Sbjct: 242 EEAHIAGKAIVDLAAAIEASGDVDEDMDKILQTHQEKHPHSLLHAVAYY 290
>gi|342319742|gb|EGU11689.1| Phosphoprotein phosphatase [Rhodotorula glutinis ATCC 204091]
Length = 1226
Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 123/223 (55%), Gaps = 41/223 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSMEAH LSK V S GTG S V
Sbjct: 121 VVCASNQNRSMEAHNVLSKANFKVISAGTG--------SAV------------------- 153
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++D+PN+Y F T YE +YQDL KD+ YT NGLL ML+RN+
Sbjct: 154 ------------RLPGPSIDRPNIYAF-GTPYEHMYQDLKQKDERLYTANGLLTMLDRNR 200
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+IK PE++QES D++ITCEER YD V++ ++ L N PVH+IN++I+DN EEA
Sbjct: 201 KIKTAPERWQESNKVADVVITCEERCYDAVIDDLLSKNGEL-NRPVHVINVEIKDNHEEA 259
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTI 231
+ EL S +DLD+EID+I+ +E+ LLHT+
Sbjct: 260 LIAGKAMLELCSAIEASKDLDSEIDDILARQQERHPHELLHTV 302
>gi|444723412|gb|ELW64069.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 206
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 104/178 (58%), Gaps = 41/178 (23%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
MP L+VAVVCSSN NRSMEAH+ LSK+G V+SFGTG
Sbjct: 1 MPLPLRVAVVCSSNQNRSMEAHSILSKRGFSVRSFGTGT--------------------- 39
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NGL
Sbjct: 40 ------------------HVKLPGAAPDKPNVYDFRTT-YDQMYHDLLRKDKELYTQNGL 80
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
LHML+RNKRIK PE+FQ +D FD+I+TCEERVYDQV+E ++ PVH++N
Sbjct: 81 LHMLDRNKRIKAAPERFQSCRDVFDLIVTCEERVYDQVVEELSSREQE-TCQPVHVVN 137
>gi|336386458|gb|EGO27604.1| hypothetical protein SERLADRAFT_382815 [Serpula lacrymans var.
lacrymans S7.9]
Length = 257
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 122/226 (53%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H+ L K G V S GTG S V
Sbjct: 73 VVCASNQNRSMEGHSVLQKAGYRVISSGTG--------SAV------------------- 105
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++DKPN+Y F T Y IY++L +KD YT NGLLHML+RN+
Sbjct: 106 ------------RLPGPSIDKPNIYPF-GTPYHTIYEELTSKDTRLYTANGLLHMLDRNR 152
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
R+KL PE++QES+ D++ITCEER +D V + + N PVH+INI+I+DN EEA
Sbjct: 153 RLKLAPERWQESRTVADVVITCEERCFDAVCDDLLARGGDF-NRPVHIINIEIKDNHEEA 211
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L S D+D+EI+ I++ +E+ LLH + FY
Sbjct: 212 LIAGKAMLDLASAIESSNDIDDEIESILKAQQERHPHSLLHAVAFY 257
>gi|432108842|gb|ELK33447.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Myotis davidii]
Length = 217
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 127/233 (54%), Gaps = 42/233 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKG-VDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
S L++AVVCSSN NRSMEAH L ++G + V+SFGTG
Sbjct: 26 SRLRLAVVCSSNQNRSMEAHCMLRRQGFLRVRSFGTGS---------------------- 63
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
SV L G PNVYDF TT YE +Y+DL+ KD+ Y G+L
Sbjct: 64 ------------SVRL-----PGPTPYMPNVYDFQTT-YEQMYEDLIRKDEDLYRHTGIL 105
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
ML+RNKRIK +PE+FQ D FD+I+TCEE V+ +V+ N+ S+ PV++IN+DI
Sbjct: 106 GMLQRNKRIKPRPERFQNCYDMFDLILTCEESVFWRVVREL-NERQSVMRKPVNVINVDI 164
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QD+ EA LG+ L L + + E+ E+++ FEE S P LH FY
Sbjct: 165 QDDDTEAILGSVLLCHLCHCILLMGNTQKELVELLKLFEEGLSMPFLHARCFY 217
>gi|296479843|tpg|DAA21958.1| TPA: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
Length = 194
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 127/238 (53%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVC SN+NRSMEAH LSK G V+SFG G
Sbjct: 1 MPSSPLRVAVVCMSNVNRSMEAHRILSKNGFHVRSFGAGS-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A P +YDF +T+Y+ ++ DL +KD+ Y RNG
Sbjct: 41 -------------------HVRLPGGARKPPVLYDF-STSYKKMHSDLSSKDQKRYKRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF---DNQMISLENTPVHL 176
+LH+L+RN+RIK PE+FQE D FD+I TC +R Y++V+ D + PV +
Sbjct: 81 VLHILKRNERIKPGPERFQECPDPFDVIFTCGQRAYNRVVADLCARDQETWQ----PVLV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+N+DI D E A+LGA + EL + +D + + E++Q +EK R LHT+ FY
Sbjct: 137 VNVDIDDTLEAASLGALIICELCQGLQQADDTQSHLAELLQAAKEKTGRSFLHTVCFY 194
>gi|345308858|ref|XP_001518897.2| PREDICTED: hypothetical protein LOC100089504 [Ornithorhynchus
anatinus]
Length = 471
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 115 YTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPV 174
YT+NG+LHML+RNKRIK +PE+FQ KD FD+I+TCEERVYDQV+E N PV
Sbjct: 353 YTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL-NSREQETCQPV 411
Query: 175 HLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
H+IN+DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 412 HVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 471
>gi|326426640|gb|EGD72210.1| RNA polymerase II subunit A domain phosphatase SSU72 [Salpingoeca
sp. ATCC 50818]
Length = 275
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 130/233 (55%), Gaps = 47/233 (20%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ AVVCSSN NRSMEAH +L ++G +V+S+GTG C
Sbjct: 86 RYAVVCSSNQNRSMEAHLFLKQRGFNVESYGTG-------------SCV----------- 121
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
I G ++D+PNV++F + +Y+++Y+ L ++KA Y + G+L ML+
Sbjct: 122 ---------------KIPGPSIDRPNVFEFDSISYDEMYKQLEAQNKALYQQTGMLAMLD 166
Query: 126 RNKRIKLKPEKFQESKDK-FDIIITCEERVYDQV---LEHFDNQMISLENTPVHLINIDI 181
RN++IK PEKFQ + DK FDII+TCE R++D+V L+ DN L VH+ N+DI
Sbjct: 167 RNRKIKRNPEKFQRATDKRFDIILTCETRIFDEVVRDLQQRDNTTGEL----VHICNLDI 222
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D E AT GA L + +DLD E++ ++ FE+ L+H++ FY
Sbjct: 223 KDTHECATQGALNFVHLAQLMEATDDLDEEVEAVIARFEDDTGEELMHSVAFY 275
>gi|299747514|ref|XP_001837087.2| phosphoprotein phosphatase [Coprinopsis cinerea okayama7#130]
gi|298407554|gb|EAU84704.2| phosphoprotein phosphatase [Coprinopsis cinerea okayama7#130]
Length = 281
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 122/226 (53%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H LSK G V S GTG S V
Sbjct: 97 VVCASNQNRSMEGHNVLSKAGYRVISSGTG--------SAV------------------- 129
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G A+DKPN+Y F T Y IY++L +KD YT NGLL ML+RN+
Sbjct: 130 ------------RLPGPAIDKPNIYSF-GTPYNTIYEELSSKDPRLYTANGLLQMLDRNR 176
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
RIK PE++QE++ D++ITCEER +D V + N+ L + PVH+IN++I+DN EEA
Sbjct: 177 RIKTAPERWQETRTVADVVITCEERCFDAVCDDLLNRGGDL-SKPVHIINMEIKDNHEEA 235
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +D+D ID+I++ +EK LLH + +Y
Sbjct: 236 AIAGKAMLDLAAAIEATDDIDENIDKILEAQQEKHPHNLLHAVAYY 281
>gi|73988223|ref|XP_542338.2| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Canis lupus
familiaris]
Length = 246
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 125/228 (54%), Gaps = 43/228 (18%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L+VAVVCSSNMNRSMEAH L K+G V+SFG +
Sbjct: 28 PSPLRVAVVCSSNMNRSMEAHDILQKRGFCVRSFGVARQV-------------------- 67
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G + P +YDF +TTY+ +Y+DL K++ Y+ NG+L
Sbjct: 68 -------------------KLPGLIRNCPVLYDF-STTYKQMYKDLWRKNRECYSSNGIL 107
Query: 122 HMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINID 180
+L RN+RIK PE+FQE D FD+I TCEERVYD+V++ + + + P+H++N+D
Sbjct: 108 QLLGRNQRIKPHPERFQECSDPFDVIFTCEERVYDRVVQDLCAREQATFQ--PLHVVNVD 165
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLL 228
I D EEATLGAFL L + D+++ + +++ EEK + L
Sbjct: 166 IVDTLEEATLGAFLIYRLCQSLQQAGDMEDSLGQLLLAAEEKTGKSFL 213
>gi|392568635|gb|EIW61809.1| Ssu72-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 257
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H L+K G V S GTG S V
Sbjct: 73 VVCASNQNRSMEGHFVLAKAGFRVCSSGTG--------SAV------------------- 105
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G A+DKPN+Y F T Y DIY+ L ++D Y+ NGLL ML+RN+
Sbjct: 106 ------------RLPGPAIDKPNIYPF-GTPYNDIYEQLSSQDARLYSANGLLQMLDRNR 152
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
R+KL PE++QE+K D++ITCEER +D V + + N PVH+IN++I+DN EEA
Sbjct: 153 RLKLAPERWQETKTVADVVITCEERCFDAVCDDLLTRGGDF-NKPVHIINLEIKDNHEEA 211
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +D+D EI++I+Q +EK +LH + +Y
Sbjct: 212 HIAGKAMVDLATAIENAKDIDEEINDILQAHQEKHPHSILHAVAYY 257
>gi|149719693|ref|XP_001496934.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Equus caballus]
Length = 210
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 130/237 (54%), Gaps = 48/237 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ LKVAVVC SNMNRSMEAH+ L KK V SF TG +
Sbjct: 1 MPSSPLKVAVVCVSNMNRSMEAHSILKKKAFSVWSFRTGSR------------------- 41
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A + P Y F +TTY+++Y DL+ KD+ YTRNG
Sbjct: 42 --------------------VRLPGEAPNLPVAYYF-STTYKEMYNDLLRKDRQHYTRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHL 176
+LH+L RN+RIK +PE+FQE + FD+I TC E ++D+V+E + + E PVH+
Sbjct: 81 MLHILGRNERIKPRPERFQECCEAFDVIFTCGESIHDRVVE----DLCAREQETFQPVHV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
IN+DIQ+ E+ATLGA L EL +++++ + +++ EEK + LH F
Sbjct: 137 INVDIQNTPEDATLGALLICELCQCLQHMDNMEDSLAKLLLAVEEKRGKKFLHGGCF 193
>gi|403177817|ref|XP_003336253.2| hypothetical protein PGTG_18028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173216|gb|EFP91834.2| hypothetical protein PGTG_18028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 267
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 42/232 (18%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
N VVC+SN NRSME H L+++ V S GTG S+V
Sbjct: 77 NFTFCVVCASNQNRSMEGHNVLAREAFRVTSAGTG--------SMV-------------- 114
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G A+DKPNVY F T Y+D+YQDL KD+ YT NG+L M
Sbjct: 115 -----------------RLPGPAIDKPNVYSF-GTPYDDMYQDLKEKDERLYTANGILSM 156
Query: 124 LERNKRIKLKPEKFQESK-DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+++KL PE++Q+S D++ITCEER +D V + ++ L N PVHLINI+I+
Sbjct: 157 LDRNRKLKLAPERWQDSVVGVADVVITCEERCFDAVCDDLFSRGGEL-NKPVHLINIEIK 215
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA+L +L + C+DLD++++EI+++ EK L+HT+ +Y
Sbjct: 216 DNHEEASLAGKALLDLCNAIEACKDLDSDLEEILEKQMEKHPHQLIHTVGYY 267
>gi|331247215|ref|XP_003336237.1| hypothetical protein PGTG_17818 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309315227|gb|EFP91818.1| hypothetical protein PGTG_17818 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 267
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 42/232 (18%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
N VVC+SN NRSME H L+++ V S GTG S+V
Sbjct: 77 NFTFCVVCASNQNRSMEGHNVLAREAFRVTSAGTG--------SMV-------------- 114
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G A+DKPNVY F T Y+D+YQDL KD+ YT NG+L M
Sbjct: 115 -----------------RLPGPAIDKPNVYSF-GTPYDDMYQDLKEKDERLYTANGILSM 156
Query: 124 LERNKRIKLKPEKFQESK-DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+++KL PE++Q+S D++ITCEER +D V + ++ L N PVHLINI+I+
Sbjct: 157 LDRNRKLKLAPERWQDSVVGVADVVITCEERCFDAVCDDLFSRGGEL-NKPVHLINIEIK 215
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA+L +L + C+DLD++++EI+++ EK L+HT+ +Y
Sbjct: 216 DNHEEASLAGKALLDLCNAIEACKDLDSDLEEILEKQMEKHPHQLIHTVGYY 267
>gi|384250494|gb|EIE23973.1| Ssu72-like protein [Coccomyxa subellipsoidea C-169]
Length = 192
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+KVA+VC+SN NRSMEAHA L K G V S+GT H
Sbjct: 2 GKMKVAMVCASNQNRSMEAHALLKKHGFQVSSYGTNG------------HV--------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ GT+ +PNVYDF T Y DIY+DL KD+ FY+R GLL
Sbjct: 41 ------------------KLPGTSQREPNVYDF-GTPYADIYEDLRQKDENFYSRKGLLQ 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN +K PE++Q+++D FD ++T +ER+ +Q+L+ F+++ S P+ +INI+++
Sbjct: 82 MLQRNMGVKRAPERWQDNRDVFDAVVTFDERIMEQLLDDFNSRPQSTMK-PLLVININVE 140
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA A L + ED ++ ID+++Q+FEE+ R ++T+ FY
Sbjct: 141 DNHEEAARVAPQTLRLCQLLEAKEDWEDGIDDVIQQFEEETGRRPIYTVCFY 192
>gi|392593068|gb|EIW82394.1| Ssu72-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 204
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 122/226 (53%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSMEAH+ L K+G V S+GTG S V
Sbjct: 20 VVCASNQNRSMEAHSILQKEGYRVISYGTG--------SAV------------------- 52
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++DKPN+Y F T Y IY++L KD YT NGLLHML+RN+
Sbjct: 53 ------------RLPGPSIDKPNIYSF-GTPYNTIYEELHGKDPRLYTANGLLHMLDRNR 99
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+IKL PE++QESK DI+ITCEER +D V + + VH+INI+I+DN EEA
Sbjct: 100 KIKLAPERWQESKTMADIVITCEERCFDAVCDDLLARGGEFSRV-VHIINIEIKDNHEEA 158
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +D+D +I+ I+Q +E+ +LH + FY
Sbjct: 159 FIAGKAILDLAAAIEASDDVDEDINHILQLQQERHPHSILHAVAFY 204
>gi|328771807|gb|EGF81846.1| hypothetical protein BATDEDRAFT_29671 [Batrachochytrium
dendrobatidis JAM81]
Length = 202
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 131/241 (54%), Gaps = 51/241 (21%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S +K AVVC+SN NRSMEAH L + + S+GTG
Sbjct: 2 SKIKFAVVCASNQNRSMEAHHVLRQHNFSISSYGTG------------------------ 37
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+V L G + DKPN+Y F T Y+DIY +L ++D+ YT+NGLL
Sbjct: 38 ----------TAVRL-----PGPSADKPNIYSF-GTPYDDIYNELASQDRHLYTQNGLLL 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PE+FQ++ D FD+I TCEER +D E N+ N PVH+IN++I
Sbjct: 82 MLDRNRRIKRAPERFQDTSDVFDVIFTCEERCFDAACESILNRS-RQSNQPVHVINVEII 140
Query: 183 DNQEEATLGAF----LASEL---MSMFIKCE---DLDNEIDEIMQEFEEKCSRPLLHTIL 232
DN E+AT+G LA EL MS+ + E DLD EI +++ F +K +L+TI
Sbjct: 141 DNHEQATVGGKLILQLAQELVANMSVDGQIEATTDLDQEIGALLEAFIDKTKANILYTIT 200
Query: 233 F 233
+
Sbjct: 201 Y 201
>gi|134111156|ref|XP_775720.1| hypothetical protein CNBD4490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258384|gb|EAL21073.1| hypothetical protein CNBD4490 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 376
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 123/228 (53%), Gaps = 44/228 (19%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSMEAH L+K V S GTG S V
Sbjct: 191 VVCASNNNRSMEAHYVLNKNSFRVVSAGTG--------SAV------------------- 223
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G A+DKPNVY F T Y+DIY+DL ++D YTRNG+L ML+RN+
Sbjct: 224 ------------RLPGPAIDKPNVYRF-GTPYDDIYRDLESQDPQLYTRNGILPMLDRNR 270
Query: 129 RIKLKPEKFQESKDKF-DIIITCEERVYDQVLEHFDNQMISLE-NTPVHLINIDIQDNQE 186
++K PEK+QE K D++ITCEER YD V + D S E N P+H+INI+I+DN E
Sbjct: 271 KVKKAPEKWQELKSVLADVVITCEERCYDAVCD--DLLTRSGEYNRPIHIINIEIKDNPE 328
Query: 187 EATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EA + EL +DLD++ID I+ +K LLHT+ FY
Sbjct: 329 EAHIAGQSILELARAIEASDDLDSDIDAILNAHGDKHPHTLLHTVGFY 376
>gi|328852771|gb|EGG01914.1| hypothetical protein MELLADRAFT_49939 [Melampsora larici-populina
98AG31]
Length = 268
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 123/232 (53%), Gaps = 42/232 (18%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
N VVC+SN NRSME H L+++ V S GTG S+V
Sbjct: 78 NWSFCVVCASNQNRSMEGHNVLAREAFRVTSAGTG--------SMV-------------- 115
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G A+DKPNVY F T Y+D+YQDL NKD+ YT NG+L M
Sbjct: 116 -----------------RLPGPAIDKPNVYPF-GTPYDDMYQDLKNKDERLYTANGILSM 157
Query: 124 LERNKRIKLKPEKFQESKDKF-DIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN+RIK PE++QE DIIITCEER +D V + + L N PVHLIN++I+
Sbjct: 158 LDRNRRIKRSPERWQEGISGLADIIITCEERCFDSVCDDLFYRGGEL-NKPVHLINLEIK 216
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA L +L +C DLD ++ +++ EK L+HT+ +Y
Sbjct: 217 DNHEEAFLAGQALVDLCGSIEECTDLDGQLHLVLERQMEKHPHQLIHTVAYY 268
>gi|296479879|tpg|DAA21994.1| TPA: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Bos taurus]
Length = 194
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+VAVVC SNMNRSMEAH+ L KKG +V+SFG G
Sbjct: 4 STLRVAVVCMSNMNRSMEAHSILKKKGFNVRSFGVGS----------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
++ G A + P VYDF +TTYE + +DL+ K++ + NG+L
Sbjct: 41 ----------------HVTLPGLAPNLPVVYDF-STTYEQMCKDLLCKNRMHHKSNGVLQ 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+L RN+RIK PE+FQE +D FD I TC ERVY V++ + PV++IN++I+
Sbjct: 84 ILGRNERIKSGPERFQECRDPFDAIFTCTERVYKVVVKDLCAREQKTWQ-PVYVINVEIE 142
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D E ATLGA + EL + +D+ + + ++ Q ++K + LHTI FY
Sbjct: 143 DTLEAATLGALIICELCQGLQQEDDMQSSLPKLFQAVKKKTGKSFLHTICFY 194
>gi|410989932|ref|XP_004001207.1| PREDICTED: uncharacterized protein LOC101086792 [Felis catus]
Length = 314
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 89/117 (76%), Gaps = 2/117 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ +
Sbjct: 136 LPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCR 194
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 195 DLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGAFLICEL 250
>gi|213407982|ref|XP_002174762.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Schizosaccharomyces japonicus yFS275]
gi|212002809|gb|EEB08469.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Schizosaccharomyces japonicus yFS275]
Length = 197
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 131/234 (55%), Gaps = 43/234 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+NLK++V+C+SN NRSMEAH L G +V+SFGTG S V
Sbjct: 5 TNLKISVICASNQNRSMEAHNVLKNAGYEVQSFGTG--------SAV------------- 43
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPN+Y F +Y++IY +L +D YT NGLL
Sbjct: 44 ------------------RLPGPSIDKPNIYQF-GYSYDNIYNELEAQDARLYTANGLLK 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PE++Q+ ++ FDI+ITCEER +D V E + +N PV LIN+DI+
Sbjct: 85 MLDRNRRIKTAPERWQDQRNTFDIVITCEERCFDAVCEDLFRRG-EKQNYPVFLINVDIK 143
Query: 183 DNQEEATLGAFLASELMSMFIKC-EDLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
DN EEA++G L+ +DL+ + +IM E++ K + P+L TI ++
Sbjct: 144 DNHEEASVGGKAILALVEKLTDAGDDLEEKFTDIMTEWQTKYPKLPVLFTIHYF 197
>gi|167517765|ref|XP_001743223.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778322|gb|EDQ91937.1| predicted protein [Monosiga brevicollis MX1]
Length = 196
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 134/236 (56%), Gaps = 42/236 (17%)
Query: 1 MP-SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MP + + AVVCSSN NRSME H + G +++S+GTG S V
Sbjct: 1 MPDATRRYAVVCSSNQNRSMETHLVFQRHGFNIESYGTG--------SAV---------- 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G ++DKPNV+ F TTYED+Y+ L ++ Y+ NG
Sbjct: 43 ---------------------KLPGPSIDKPNVFGFDDTTYEDMYKQLKEQNFELYSGNG 81
Query: 120 LLHMLERNKRIKLKPEKFQ-ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
+L MLERN IK +PEKFQ ++K +FDII+TCE R++D+VL + + E TPVH+IN
Sbjct: 82 VLDMLERNMAIKPRPEKFQRQTKKRFDIILTCESRIFDEVLRDLE-ERDGAEGTPVHIIN 140
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DI DN AT+GA +L M EDLD++ID+I++ F+++ LLH + FY
Sbjct: 141 LDIPDNHSAATVGALNLYKLAQMMEASEDLDDDIDDIIETFQKETGEELLHALAFY 196
>gi|393246301|gb|EJD53810.1| Ssu72-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 251
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 121/226 (53%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H L+ G+ V S+GTG S V
Sbjct: 67 VVCASNQNRSMEGHNVLAHAGMRVISYGTG--------SAV------------------- 99
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G + D+PNVY F T Y D+Y++L KD Y NG+L ML+RN+
Sbjct: 100 ------------RLPGASADRPNVYQF-GTPYNDMYEELSAKDARLYQANGVLAMLDRNR 146
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
RIK PE++QE + DI+ITCEER +D V + ++ + N PVH+INI+I+DN EEA
Sbjct: 147 RIKRAPERWQEGRAIPDIVITCEERCFDAVCDDLLSRGGDM-NRPVHVINIEIKDNHEEA 205
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +D+D ++ +I+QE +EK LLH + +Y
Sbjct: 206 HIAGKAILDLATAIEAADDMDEDMGKILQEHQEKHPHALLHVVTYY 251
>gi|114642193|ref|XP_001153025.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 188
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 123/220 (55%), Gaps = 47/220 (21%)
Query: 18 SMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNL 77
+ EAH+ +KG+ V+SFGT ES V
Sbjct: 13 AWEAHSIFRRKGLSVRSFGT--------ESHV---------------------------- 36
Query: 78 FFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKF 137
+ G +P VYDF TTY+++Y DL+ KD+ YTRNG+LH+L RN+RIK PE+F
Sbjct: 37 ---RLPGPRPHRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGILHILGRNERIKPGPERF 92
Query: 138 QESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLINIDIQDNQEEATLGAFL 194
Q+ D FD+I TCEE VYD V+E + S E PVH+IN+DIQD E+ATLGAFL
Sbjct: 93 QDCTDFFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHVINMDIQDTLEDATLGAFL 148
Query: 195 ASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
SE+ + +D+++ + E++ + EEK + LHT+ FY
Sbjct: 149 ISEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVCFY 188
>gi|358421662|ref|XP_003585065.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Bos taurus]
Length = 194
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 125/232 (53%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+VAVVC NMNRSMEAH+ L KKG +V+SFG G
Sbjct: 4 STLRVAVVCMRNMNRSMEAHSILKKKGFNVRSFGVGS----------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
++ G A + P VYDF +TTYE + +DL+ K++ + NG+L
Sbjct: 41 ----------------HVTLPGLAPNLPVVYDF-STTYEQMRKDLLCKNRMHHKSNGVLQ 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+L RN+RIK PE+FQE +D FD I TC ERVY V++ + PV++IN++I+
Sbjct: 84 ILGRNERIKSGPERFQECRDPFDAIFTCTERVYKVVVKDLCAREQKTWQ-PVYVINVEIE 142
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D E ATLGA + EL + +D+ + + ++ Q ++K + LHTI FY
Sbjct: 143 DTLEAATLGALIICELCQGLQQEDDMQSSLPKLFQAVKKKTGKSFLHTICFY 194
>gi|328766200|gb|EGF76256.1| hypothetical protein BATDEDRAFT_28613 [Batrachochytrium
dendrobatidis JAM81]
Length = 210
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 131/248 (52%), Gaps = 57/248 (22%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S +K AVVC+SN NRSMEAH L + + S+GTG
Sbjct: 2 SKIKFAVVCASNQNRSMEAHHVLRQHNFSISSYGTG------------------------ 37
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+V L G + DKPN+Y F T Y+DIY +L ++D+ YT+NGLL
Sbjct: 38 ----------TAVRL-----PGPSADKPNIYSF-GTPYDDIYNELASQDRHLYTQNGLLL 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDN-------QMISLENTPVH 175
ML+RN+RIK PE+FQ++ D FD+I TCEER +D E D+ N PVH
Sbjct: 82 MLDRNRRIKRAPERFQDTSDVFDVIFTCEERCFDAACEMIDSISDVGILNRSRQSNQPVH 141
Query: 176 LINIDIQDNQEEATLGAF----LASEL---MSMFIKCE---DLDNEIDEIMQEFEEKCSR 225
+IN++I DN E+AT+G LA EL MS+ + E DLD EI +++ F +K
Sbjct: 142 VINVEIIDNHEQATVGGKLILQLAQELVANMSVDGQIEATTDLDQEIGALLEAFIDKTKA 201
Query: 226 PLLHTILF 233
+L+TI +
Sbjct: 202 NILYTITY 209
>gi|426245025|ref|XP_004016316.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
gi|426245027|ref|XP_004016317.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
Length = 194
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 121/238 (50%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVC SN+NRSMEAH L K G V+SFG G
Sbjct: 1 MPSSPLRVAVVCMSNVNRSMEAHRVLRKNGFHVRSFGAGS-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G P +YDF +T Y+ ++ DL +KD+ Y RNG
Sbjct: 41 -------------------HVRLPGGPRKPPVLYDF-STPYKKMHGDLSSKDQKHYQRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF---DNQMISLENTPVHL 176
+L +L RN+RIK PE+FQE D FD+I TC +R Y++V+ D + PV +
Sbjct: 81 VLRILRRNERIKPGPERFQECPDPFDVIFTCGQRAYNRVVADLCARDQETWQ----PVPV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+N+DI D E A+LGA + EL + D + + E++Q EEK R LHT+ FY
Sbjct: 137 VNVDIDDTLEAASLGASIICELCQGLQQAGDTQSRLAELLQAAEEKTGRSFLHTVCFY 194
>gi|50556318|ref|XP_505567.1| YALI0F18194p [Yarrowia lipolytica]
gi|74632479|sp|Q6C195.1|SSU72_YARLI RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|49651437|emb|CAG78376.1| YALI0F18194p [Yarrowia lipolytica CLIB122]
Length = 193
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 42/233 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+ LK+ VC+SN NRSMEAH L + G DV+S+GTG S V
Sbjct: 2 TELKMCTVCASNQNRSMEAHKVLKEAGFDVESYGTG--------SAV------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G A DKPN+Y F T Y+DIY +L +D+ YT NGLL
Sbjct: 41 ------------------RLPGPAYDKPNIYAF-GTPYDDIYNELSAQDERLYTANGLLT 81
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN++IK PE++ E K+ FD++ TCEER ++ V + ++ L+ PVH+IN+DI+
Sbjct: 82 MLDRNRKIKTAPERWVEHKNVFDVVFTCEERCFEAVCDDLMDRGEKLQR-PVHVINVDIR 140
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
DN E++ +GA +L +DLD +I IM ++E+ + PL+H + ++
Sbjct: 141 DNHEDSVIGAQGILKLARSLADSKDLDAQIMGIMDSWQEQHPKLPLMHAVGYF 193
>gi|388855955|emb|CCF50530.1| probable SSU72-Nuclear zinc-finger motif containing protein
[Ustilago hordei]
Length = 245
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S++ VVC+SN NRSM AH+ L++ G +V S GTG S V
Sbjct: 55 SSIMFCVVCASNQNRSMAAHSLLAQSGFNVTSAGTG--------SAV------------- 93
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ PN+Y F T Y DI +DL NKD Y NGL+
Sbjct: 94 ------------------RLPGPKINLPNIYPF-GTAYTDIIEDLNNKDPRLYWANGLMT 134
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML RNK +K PE++QE+K DI+ITCEER +D V E N+ L N PVH+IN++I+
Sbjct: 135 MLNRNKDVKRAPERWQETKYTADIVITCEERCFDAVCEDLFNRGGEL-NRPVHVINVEIK 193
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +L + +D+D E+D+I+++ ++ +LHT+ +Y
Sbjct: 194 DNHEEAVAAGKAILDLANAIAGSQDIDTEMDQILEQHQQAYPHAILHTVAYY 245
>gi|330843210|ref|XP_003293553.1| hypothetical protein DICPUDRAFT_42185 [Dictyostelium purpureum]
gi|325076096|gb|EGC29912.1| hypothetical protein DICPUDRAFT_42185 [Dictyostelium purpureum]
Length = 213
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 131/231 (56%), Gaps = 42/231 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
K+A+VC+SN NRS+EAH K G +++SFGT HC
Sbjct: 23 KIAMVCASNQNRSLEAHYLFVKTGFKNIRSFGTSG------------HC----------- 59
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PN++ F T Y +IY L ++D+ Y +NGLL+ML
Sbjct: 60 ----------------KLPGPSIHQPNIFSF-GTPYSEIYTTLRDQDQELYIKNGLLNML 102
Query: 125 ERNKRIKLKPEKFQESKD-KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
ERNK++KL PEK+QE + KFDI+ T ++RVYD V++ + I+ PVH+IN+ ++D
Sbjct: 103 ERNKKVKLAPEKWQEELNAKFDIVFTFDQRVYDAVIDDLAQRDITTLMQPVHIINLQVKD 162
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEA GA A E+ S+ ED ++++++I++ F + R +LHT++FY
Sbjct: 163 THEEAVGGAQHALEITSIIENTEDWEDKLNDILENFYKSTQRQILHTLMFY 213
>gi|410972780|ref|XP_003992834.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Felis catus]
Length = 196
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 126/236 (53%), Gaps = 45/236 (19%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
PS L VAV C NMNRSMEAH+ L K+G V+SFG +
Sbjct: 3 PSALGVAVGCMINMNRSMEAHSILQKRGFSVRSFGA----------------------IS 40
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNV--YDFHTTTYEDIYQDLMNKDKAFYTRNG 119
PL + G +P+ YDF +T Y Y DL KD Y NG
Sbjct: 41 PL-----------------RLPGPTRCRPHPMRYDF-STRYMHTYDDLSRKDLECYRGNG 82
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLIN 178
+L +LER +RIK PE+FQE D F++I TCEERVYD+V++ + ++ VH+++
Sbjct: 83 ILRILERKERIKPHPERFQECSDSFEVIFTCEERVYDRVVQELCAREQVTFRA--VHVVD 140
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DI+D EEAT AFL EL F + +D ++ +D+++Q EEK + +LHT+ FY
Sbjct: 141 MDIEDTLEEATSRAFLICELCQSFQQADDKEDSLDQLLQAAEEKTGKSILHTVCFY 196
>gi|302840788|ref|XP_002951940.1| hypothetical protein VOLCADRAFT_61755 [Volvox carteri f.
nagariensis]
gi|300262841|gb|EFJ47045.1| hypothetical protein VOLCADRAFT_61755 [Volvox carteri f.
nagariensis]
Length = 192
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 124/230 (53%), Gaps = 41/230 (17%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VC+SN NRSMEAHA L K G++V SFG G H
Sbjct: 4 LRFAMVCASNQNRSMEAHALLKKHGMNVSSFGVG------------AHV----------- 40
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F T Y+ IY DL KD Y RNGLL ML
Sbjct: 41 ----------------KLPGPSQKEPNVYKF-GTPYKTIYDDLAAKDPDLYNRNGLLEML 83
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN +KL PE++QE++D+FD++IT EERV +QVLE NQ P+ + N+D++DN
Sbjct: 84 KRNMGVKLAPERYQENRDQFDVVITFEERVMEQVLEDM-NQRPQASLQPLLVCNMDVKDN 142
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+EA A +L M + + ++ +D ++ +F+++ R L +TI +Y
Sbjct: 143 HKEAMFAALQTLKLCQMLEQGGEWEDCVDAVVAQFQQETGRRLTYTICYY 192
>gi|343424841|emb|CBQ68379.1| probable SSU72-Nuclear zinc-finger motif containing protein
[Sporisorium reilianum SRZ2]
Length = 240
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 121/232 (52%), Gaps = 41/232 (17%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
SN+ VVC+SN NRSM AH+ L++ G +V S GTG S V
Sbjct: 50 SNIMFCVVCASNQNRSMAAHSLLAQSGFNVTSAGTG--------SAV------------- 88
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ PN+Y F T Y DI DL +KD Y NGL+
Sbjct: 89 ------------------RLPGPKINLPNIYPF-GTAYTDIIDDLNSKDPRLYWANGLMT 129
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RNK +K PE++QE+K DI+ITCEER +D V E N+ L N PVH+IN++I+
Sbjct: 130 MLKRNKDVKRAPERWQETKYAADIVITCEERCFDAVCEDLFNRGGEL-NRPVHVINVEIK 188
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +L + +D+D E+D I++ ++ +LHT+ +Y
Sbjct: 189 DNHEEAVAAGKAILDLANAIAASQDIDAEMDAILERHQQTHPHAILHTVAYY 240
>gi|224286621|gb|ACN41015.1| unknown [Picea sitchensis]
Length = 193
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 125/232 (53%), Gaps = 43/232 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VC+SN NRSMEAHA L K G DV S+GTG H
Sbjct: 3 LRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTG------------AHV----------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVYDF T Y ++ DL KD Y RNGLL ML
Sbjct: 40 ----------------KLPGPSIREPNVYDF-GTPYRRMFDDLKRKDPELYKRNGLLQML 82
Query: 125 ERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +K+ P+++QE+ FD++ T EERV+D V+E N+ L + V ++N+D++
Sbjct: 83 KRNLNVKMAPQRWQENAVDGPFDVVFTFEERVFDMVIEDLQNREPILMRS-VLVVNLDVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+ EEA +GA LA +L ++EID+I+ FE + R L++TI FY
Sbjct: 142 DSHEEAAVGARLALDLCQKLEAANSWEDEIDDIVMRFERQHRRKLIYTIYFY 193
>gi|66823137|ref|XP_644923.1| hypothetical protein DDB_G0272871 [Dictyostelium discoideum AX4]
gi|74857750|sp|Q558Z3.1|SSU72_DICDI RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|60473125|gb|EAL71073.1| hypothetical protein DDB_G0272871 [Dictyostelium discoideum AX4]
Length = 214
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 43/234 (18%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
N ++A+VC+SN NRS+EAH K G +++SFGT HC
Sbjct: 21 NKRIAMVCASNQNRSLEAHHLFVKNGFKNIRSFGTSA------------HC--------- 59
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PN++ F T Y++IY L N+D+ Y RNGLL+
Sbjct: 60 ------------------KLPGPSIHQPNIFSF-GTPYQEIYTSLKNQDQELYIRNGLLN 100
Query: 123 MLERNKRIKLKPEKFQE-SKDKFDIIITCEERVYDQVLEHFDNQMISLEN-TPVHLINID 180
MLERN +KL PEK+QE + KF+I+ T ++RVYD V+E + +S PVH+IN+
Sbjct: 101 MLERNISVKLAPEKWQEEQQSKFEIVYTFDQRVYDAVIEDLLQRDVSSSLLQPVHIINLQ 160
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
++D EEA GA A E+ S+ K + + ++D+I+++F ++ SR LHT++FY
Sbjct: 161 VKDTHEEAVGGAQHALEITSIIEKTLNWEEKLDQILEDFYKQTSRQFLHTLMFY 214
>gi|426245023|ref|XP_004016315.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
Length = 194
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 120/238 (50%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVC SN+NRSMEAH L K G V+SFG G
Sbjct: 1 MPSSPLRVAVVCMSNVNRSMEAHRVLRKNGFHVRSFGAGSHV------------------ 42
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G P +YDF +T + ++ DL +KD+ Y RNG
Sbjct: 43 ---------------------RLPGGPRQPPVLYDF-STPCKKMHGDLSSKDQKHYQRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF---DNQMISLENTPVHL 176
+L +L RN+RIK PE+FQE D FD+I TC +R Y++V+ D + PV +
Sbjct: 81 VLRILRRNERIKPGPERFQECPDPFDVIFTCGQRAYNRVVADLCARDQETWQ----PVPV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+N+DI D E A+LGA + EL + D + + E++Q EEK R LHT+ FY
Sbjct: 137 VNVDIDDTLEAASLGASIICELCQGLQQAGDTQSRLAELLQAAEEKTGRSFLHTVCFY 194
>gi|390601325|gb|EIN10719.1| Ssu72-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 175
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 115/216 (53%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME H LS+ G V SFGTG S V
Sbjct: 1 MEGHNVLSQGGYRVISFGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++DKPNVY F T Y IY++L KD YT NGLL ML+RN+RIKL PE++Q
Sbjct: 24 --RLPGPSIDKPNVYPF-GTPYNTIYEELSQKDARLYTANGLLQMLDRNRRIKLAPERWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
ESK DI+ITCEER +D V + ++ L N PVH+INI+I+DN EEA + +L
Sbjct: 81 ESKAVADIVITCEERCFDAVCDDLLSRGGDL-NRPVHVINIEIRDNHEEAWIAGKAMLDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ D+D +ID+I++ +EK PLLH + +Y
Sbjct: 140 AAAIEASNDIDEDIDQILRTQQEKHPHPLLHAVAYY 175
>gi|168018157|ref|XP_001761613.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687297|gb|EDQ73681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 43/232 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VC+SN NRSMEAHA L ++G+DV S+GTG H
Sbjct: 3 LRHAMVCASNQNRSMEAHALLQRQGLDVSSYGTGS------------HV----------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F T Y I +DL NK+ Y RNGLL ML
Sbjct: 40 ----------------KLPGPSIREPNVYAF-GTPYRSILEDLTNKNPELYKRNGLLQML 82
Query: 125 ERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +K P+++Q+ + FD++ T EERV++ V++ +N+ + L N + +IN+D++
Sbjct: 83 KRNVGVKEAPQRWQDNAADGAFDVVFTFEERVFNMVIDDLENREVRLLNVAL-IINLDVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +G LA +L + ++EID+I+ FE + R L++TI FY
Sbjct: 142 DNHEEAAIGGKLALDLCQKLELADAWEDEIDDIISRFERQHRRRLIYTIRFY 193
>gi|440905149|gb|ELR55572.1| hypothetical protein M91_15721, partial [Bos grunniens mutus]
Length = 154
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 104/153 (67%), Gaps = 5/153 (3%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A D+PNVYDF TT +++Y+DL+ KDK + +NG+L MLERNK IK +PE+FQ+ K
Sbjct: 7 LPGPAHDRPNVYDFRTTC-DEMYKDLLRKDKELHMQNGVLWMLERNKSIKPRPERFQDCK 65
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D FD+I++CEERVYDQV+E N PVH+IN+ D +EATLGAFL +L
Sbjct: 66 DPFDLILSCEERVYDQVVEAM-NSGEQETCQPVHVINV---DTHKEATLGAFLICDLCQC 121
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+++ I +++Q F+EK R LHT+ FY
Sbjct: 122 VQLMGDMEDGISKLLQVFQEKSGRSFLHTVCFY 154
>gi|357160720|ref|XP_003578855.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Brachypodium distachyon]
Length = 198
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 44/232 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSNMNRSMEAHA L + +DV+S+GTG +
Sbjct: 8 RFAMVCSSNMNRSMEAHAVLGRAALDVESYGTGSQ------------------------- 42
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G +M +PNVYDF T Y IY+DL KD Y RNGLL ML+
Sbjct: 43 --------------VKLPGPSMHEPNVYDF-GTPYGGIYEDLRRKDPDLYKRNGLLPMLK 87
Query: 126 RNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++Q++ FD+I+T EERV+D V+E +N+ L + V +IN+D++D
Sbjct: 88 RNISVKLAPQRWQDNAGDGVFDMILTFEERVFDLVVEDMNNREPKLLKS-VLIINMDVKD 146
Query: 184 NQEEATLGAFLASELMSMFIKC-EDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N EEA++GA LA +L ED + ID+++ FE++ R L + + FY
Sbjct: 147 NHEEASVGAKLALDLCQKLEGVDEDWEEIIDDLIVAFEKQHKRKLTYYVSFY 198
>gi|15219558|ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana]
gi|12324205|gb|AAG52071.1|AC012679_9 unknown protein; 85102-83684 [Arabidopsis thaliana]
gi|26453040|dbj|BAC43596.1| unknown protein [Arabidopsis thaliana]
gi|28973307|gb|AAO63978.1| unknown protein [Arabidopsis thaliana]
gi|332197391|gb|AEE35512.1| Ssu72-like protein [Arabidopsis thaliana]
Length = 193
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 130/231 (56%), Gaps = 43/231 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSN NRSMEAHA L ++G+DV S+GTG H
Sbjct: 4 RYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGS------------HV------------ 39
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y+ ++ +L KD Y RNG+L M++
Sbjct: 40 ---------------KLPGPSLREPNVYDF-GTPYKQMFDELRRKDPELYKRNGILQMIK 83
Query: 126 RNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++Q++ FD+++T EE+V+D VLE +N+ SL T + ++N++++D
Sbjct: 84 RNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLEDLNNREQSLTKT-ILVMNLEVKD 142
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N EEA +G LA EL E ++ ID+I+ FE++ R L+++I FY
Sbjct: 143 NHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEKQHRRKLVYSISFY 193
>gi|297842133|ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
lyrata]
gi|297334789|gb|EFH65207.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 43/231 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSN NRSMEAHA L ++G+DV S+GTG H
Sbjct: 4 RYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGS------------HV------------ 39
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y+ ++ +L KD Y RNG+L ML+
Sbjct: 40 ---------------KLPGPSVREPNVYDF-GTPYKQMFDELRRKDPELYKRNGILQMLK 83
Query: 126 RNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++Q++ FD+++T EE+V+D VLE +N+ SL T + ++N++++D
Sbjct: 84 RNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLEDLNNREQSLMKT-ILVMNLEVKD 142
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N EEA +G LA EL E ++ ID+I+ FE++ R L+++I FY
Sbjct: 143 NHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEKQHRRKLVYSISFY 193
>gi|19114988|ref|NP_594076.1| phosphoric ester hydrolase Ssu72 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582123|sp|O42868.1|SSU72_SCHPO RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu72; Short=CTD phosphatase ssu72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|2706455|emb|CAA15913.1| phosphoric ester hydrolase Ssu72 (predicted) [Schizosaccharomyces
pombe]
Length = 197
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 129/234 (55%), Gaps = 43/234 (18%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
+NL+++V+C+SN NRSMEAH L G V SFGTG S V
Sbjct: 5 TNLQISVICASNQNRSMEAHNVLKNAGYQVDSFGTG--------SAV------------- 43
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPN+Y F Y++IY++L +D YT NGLL
Sbjct: 44 ------------------RLPGPSIDKPNIYQF-GYPYDEIYKELEAQDSRLYTANGLLK 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK P ++Q+ ++I+ITCEER YD + E + +L N PV+LIN+DI+
Sbjct: 85 MLDRNRRIKRAPCRWQDQDSIYNIVITCEERCYDAICEDLYRRGETL-NRPVYLINVDIK 143
Query: 183 DNQEEATLGAFLASELMSMFIKCED-LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
DN EEA++G +L++ + +D L+ IM +F+ + P+L+TI F+
Sbjct: 144 DNHEEASVGGKAILDLVNKLTEAQDKLEELFPSIMADFQSNHPKLPVLYTIHFF 197
>gi|226528467|ref|NP_001141361.1| uncharacterized protein LOC100273452 [Zea mays]
gi|194704174|gb|ACF86171.1| unknown [Zea mays]
gi|195619310|gb|ACG31485.1| protein SSU72 [Zea mays]
gi|414878440|tpg|DAA55571.1| TPA: protein SSU72 [Zea mays]
Length = 198
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 44/232 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSNMNRSMEAH+ L + G+DV+S+GTG H
Sbjct: 8 RFAMVCSSNMNRSMEAHSQLGRAGLDVESYGTGT------------HV------------ 43
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y IY DL KD Y RNGLL ML+
Sbjct: 44 ---------------KLPGPSLHEPNVYDF-GTPYGAIYDDLRRKDPELYKRNGLLPMLK 87
Query: 126 RNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++Q++ FD+I+T EERV+D V+E +N+ L V +IN+D++D
Sbjct: 88 RNTSVKLAPQRWQDNAGDGVFDMIMTFEERVFDLVVEDMNNREPRLMKC-VLIINMDVKD 146
Query: 184 NQEEATLGAFLASELMSMFIKCE-DLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N EEA +GA LA EL + D ++ ID+++ FE++ R L ++I FY
Sbjct: 147 NHEEAGVGAKLAVELCQKLEAIDGDWEDIIDDLITAFEKQHKRRLAYSISFY 198
>gi|119907562|ref|XP_001251709.1| PREDICTED: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
gi|297483270|ref|XP_002693437.1| PREDICTED: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
gi|296479877|tpg|DAA21992.1| TPA: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
Length = 194
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 48/238 (20%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVC SN+NRSMEAH LSK G V+SFG G
Sbjct: 1 MPSSPLRVAVVCMSNVNRSMEAHRVLSKNGFHVRSFGAGS-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ A + P Y+F +T+Y+ ++ L +KD+ Y RNG
Sbjct: 41 -------------------HVRLPRGARNPPVRYNF-STSYKKMHSYLFSKDQKLYKRNG 80
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF---DNQMISLENTPVHL 176
+LH+L+RN+RIK E+FQE D FD+I TC +R Y++V+ + D +M PV +
Sbjct: 81 VLHILKRNERIKPGRERFQECPDPFDVIFTCGQRAYNRVVANLCARDQEMWQ----PVPV 136
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+N+DI + E A+LGA + EL + +D + + +++Q +EK R LHT+ FY
Sbjct: 137 VNVDIDNTLEAASLGASIICELCQGLQQADDTQSHLAKLLQATKEKTGRSFLHTVCFY 194
>gi|255549148|ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
gi|223545267|gb|EEF46774.1| Protein SSU72, putative [Ricinus communis]
Length = 193
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 126/232 (54%), Gaps = 43/232 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VCSSN NRSMEAH+ L +G DV S+GTG H
Sbjct: 3 LRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTG------------AHV----------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVYDF T Y+ ++ DL KD Y RNG+L ML
Sbjct: 40 ----------------KLPGPSLREPNVYDF-GTPYKQMFDDLRRKDPDLYKRNGILPML 82
Query: 125 ERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +KL P+++Q+ + FD++ + EE+V+D V+E N+ L + V +IN++++
Sbjct: 83 KRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIEDLHNRDHVLMRS-VLVINLEVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +GA LA EL E ++ IDEI+ FE K R LL+++ FY
Sbjct: 142 DNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAFETKHRRKLLYSVSFY 193
>gi|242084918|ref|XP_002442884.1| hypothetical protein SORBIDRAFT_08g004310 [Sorghum bicolor]
gi|241943577|gb|EES16722.1| hypothetical protein SORBIDRAFT_08g004310 [Sorghum bicolor]
Length = 199
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 129/235 (54%), Gaps = 50/235 (21%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSNMNRSMEAH+ L + G+DV+S+GTG H
Sbjct: 9 RFAMVCSSNMNRSMEAHSQLGRAGLDVESYGTGT------------HV------------ 44
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y IY DL KD Y RNGLL ML+
Sbjct: 45 ---------------KLPGPSLHEPNVYDF-GTPYGAIYDDLRRKDPDLYKRNGLLPMLK 88
Query: 126 RNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++Q++ FD+I+T EERV+D V+E N+ L V +IN+D++D
Sbjct: 89 RNTSVKLAPQRWQDNAGDGVFDMIMTFEERVFDLVVEDMSNREPRLMKC-VLIINMDVKD 147
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNE----IDEIMQEFEEKCSRPLLHTILFY 234
N EEA +GA LA EL K E +D + ID+++ FE++ R L ++I FY
Sbjct: 148 NHEEAGVGAKLAVELCQ---KLEAIDGDWEDIIDDLITAFEKQHKRRLAYSISFY 199
>gi|388580810|gb|EIM21122.1| Ssu72-like protein [Wallemia sebi CBS 633.66]
Length = 224
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVCSSN NRSMEAH L++ +V SFGTG
Sbjct: 40 VVCSSNQNRSMEAHKVLAQNKFNVTSFGTG------------------------------ 69
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+V L GT++D+PN Y F T Y I QDL +KD+ YT NGLL ML RN+
Sbjct: 70 ----TAVRL-----PGTSIDRPNTYSF-GTPYNHILQDLESKDRRMYTNNGLLAMLNRNR 119
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+IKL PE++ +S D++ITCEER ++ V + N+ N VH+INI+I+DNQEEA
Sbjct: 120 QIKLAPERWADSPPTSDVVITCEERCWEAVCDDLLNRE-GYYNRSVHIINIEIKDNQEEA 178
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +DLD +I+ I+ K LLH + +Y
Sbjct: 179 AIAGKAILDLALAIEESKDLDQDIESILDNQRLKHPHALLHCVAYY 224
>gi|302801969|ref|XP_002982740.1| hypothetical protein SELMODRAFT_179725 [Selaginella moellendorffii]
gi|302818428|ref|XP_002990887.1| hypothetical protein SELMODRAFT_185661 [Selaginella moellendorffii]
gi|300141218|gb|EFJ07931.1| hypothetical protein SELMODRAFT_185661 [Selaginella moellendorffii]
gi|300149330|gb|EFJ15985.1| hypothetical protein SELMODRAFT_179725 [Selaginella moellendorffii]
Length = 194
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 131/233 (56%), Gaps = 44/233 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VC+SN NRSMEAHA L ++G+DV S+GTG++
Sbjct: 3 LRHAMVCASNQNRSMEAHALLQREGLDVSSYGTGNQ------------------------ 38
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + PN+Y F T Y I +DL NKD Y RNGLL ML
Sbjct: 39 ---------------VKLPGPTIRDPNIYQF-GTPYTAIIEDLKNKDPDLYKRNGLLPML 82
Query: 125 ERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +K P+++Q++ FD+++T EERV+D V E N+ +L T V ++N+D++
Sbjct: 83 KRNASVKDAPQRWQDNAGDGAFDVVLTFEERVFDLVNEDLQNREQTLFKT-VLVVNLDVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCE-DLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +GA LA +L + E + ++EID+I++ FE++ R L++TI FY
Sbjct: 142 DNHEEAAVGAKLALDLCKKLEESEKNWEDEIDDIVRRFEKQHKRRLIYTICFY 194
>gi|412985122|emb|CCO20147.1| predicted protein [Bathycoccus prasinos]
Length = 206
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 128/230 (55%), Gaps = 44/230 (19%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFH 66
A+VC++NMNRSM AH L +KG+ +V SFG G SV
Sbjct: 18 AMVCAANMNRSMAAHCALLEKGLLNVSSFGAG-------SSV------------------ 52
Query: 67 KVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLER 126
I G+ D PNVY F TY DI +DL+ D+ Y + GL+ MLER
Sbjct: 53 --------------KIPGSTKDDPNVYQFGKATYADIRKDLIRLDENAYRQKGLIDMLER 98
Query: 127 NKRIKLKPEKFQESKD--KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
N R+K KPE++Q++ D +FD+++ EERV+D VL D + + + TP +IN+D++D+
Sbjct: 99 NMRVKEKPERWQDNSDEKEFDVVVCFEERVFDLVL--ADMREKNAKGTPCLVINLDVRDS 156
Query: 185 QEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E+A A +A +L M KCED + EIDEI+ +FEE+ L+++ +Y
Sbjct: 157 HEDAVNAAPMALKLCEMIEKCEDWECEIDEIIDQFEEEVGIKPLYSVCYY 206
>gi|440891227|gb|ELR45064.1| hypothetical protein M91_12158, partial [Bos grunniens mutus]
Length = 155
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A + P VYDF +TTYE++ +DL+ KD+ Y NG+LH+L RN+RIK +PE+FQE +
Sbjct: 5 LPGRARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNGILHILGRNERIKPRPERFQECR 63
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATLGAFLASELM 199
D+FD+I TCEE VYD+V+E + + T PVH+IN+D+ DN EEATLG+F+ EL
Sbjct: 64 DRFDVIFTCEESVYDKVVEEL---WVREQETFQPVHVINVDMADNLEEATLGSFIICELC 120
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ ++L++ + +++ E K + LHT+ FY
Sbjct: 121 ERLQQADNLEDSLVQVLLAAERKTGKSFLHTVCFY 155
>gi|168045018|ref|XP_001774976.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673723|gb|EDQ60242.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 43/232 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VC+SN NRSMEAHA L ++G++V S+GTG H
Sbjct: 3 LRHAMVCASNQNRSMEAHALLQRQGLNVSSYGTGS------------HV----------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F T Y + +DLM KD Y RNGLL ML
Sbjct: 40 ----------------KLPGPSAREPNVYSF-GTPYRVMLEDLMKKDPELYKRNGLLQML 82
Query: 125 ERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +K P+++Q+ + FD++ T EERV+D V++ +N+ +L + +IN+D++
Sbjct: 83 KRNLGVKEAPQRWQDNAADGTFDVVFTFEERVFDTVIDDLENRETNLMKLAL-IINMDVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN +EA +G LA +L + + ++EID+I+ FE++ R L++TI FY
Sbjct: 142 DNHDEAAIGGKLALDLCQRLEQADAWEDEIDDIVSRFEKQHRRRLMYTIRFY 193
>gi|401624008|gb|EJS42085.1| ssu72p [Saccharomyces arboricola H-6]
Length = 206
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 127/241 (52%), Gaps = 50/241 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
SNLK VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 7 SNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG--------SAV------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 46 ------------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSADRYKSNGLLQ 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+R+K PEK+QES FD + TCEER +D V E N+ L N VH+IN+DI+
Sbjct: 87 MLDRNRRLKKAPEKWQESTKTFDFVFTCEERCFDAVCEDLMNRGGKL-NKIVHVINVDIK 145
Query: 183 DNQEEATLGAFLASELMSMFI----KCEDLD----NEIDEIMQEFEEKCSR-PLLHTILF 233
D+ E A +G+ EL MF KCE D + I +I+ E+++ S+ P L++ +
Sbjct: 146 DDDENAKIGSKAILELADMFNDKIEKCEKSDIPFEDCILDILTEWQDGHSQLPSLYSPSY 205
Query: 234 Y 234
Y
Sbjct: 206 Y 206
>gi|351724119|ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
gi|255628381|gb|ACU14535.1| unknown [Glycine max]
Length = 193
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 124/231 (53%), Gaps = 43/231 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSN NRSMEAH L ++G DV S+GTG H
Sbjct: 4 RYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTG------------AHV------------ 39
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y+ + +DL KD Y RNG+ ML+
Sbjct: 40 ---------------KLPGPSLREPNVYDF-GTPYKHMIEDLRRKDPDLYKRNGIFPMLK 83
Query: 126 RNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++QE + FD+++T EE+V+D V+E N+ +L T V +IN++++D
Sbjct: 84 RNSTVKLAPQRWQENAADGSFDVVVTFEEKVFDMVIEDLHNRDHALLKT-VLVINLEVKD 142
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N +EA +GA L +L E + IDEI+ FE K R LL++I FY
Sbjct: 143 NHDEAAVGARLTLDLCREIEAAESWEESIDEIIAGFENKHRRKLLYSISFY 193
>gi|281209434|gb|EFA83602.1| hypothetical protein PPL_02668 [Polysphondylium pallidum PN500]
Length = 232
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 134/232 (57%), Gaps = 43/232 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
++A+VC+SN NRS+EAH KG +++SFGT +C
Sbjct: 41 RLAMVCASNQNRSVEAHNLFLLKGYRNIRSFGTSG------------NC----------- 77
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + D+PN++ F T Y+ I++ L +++ YT+NG+L+ML
Sbjct: 78 ----------------KLPGPSQDRPNIFPF-GTPYQSIHESLRQQNQELYTQNGILNML 120
Query: 125 ERNKRIKLKPEKFQESK-DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
ERN+R+KL PEK+QE + +FDI+ T ++RV+D V++ + I+ PVH++N+ ++D
Sbjct: 121 ERNQRVKLAPEKWQEEQLARFDIVFTFDQRVFDMVVDDLTQRDITAPMQPVHIVNLQVKD 180
Query: 184 NQEEATLGAFLASELMSMFIKCED-LDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEA GA A +L+++ + ED ++ +D+I+++F K R LL+T++FY
Sbjct: 181 THEEAAGGASHALQLLNLIDETEDNWEDSMDDILEKFYRKTGRQLLYTLMFY 232
>gi|336373642|gb|EGO01980.1| hypothetical protein SERLA73DRAFT_49573 [Serpula lacrymans var.
lacrymans S7.3]
Length = 175
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME H+ L K G V S GTG S V
Sbjct: 1 MEGHSVLQKAGYRVISSGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++DKPN+Y F T Y IY++L +KD YT NGLLHML+RN+R+KL PE++Q
Sbjct: 24 --RLPGPSIDKPNIYPF-GTPYHTIYEELTSKDTRLYTANGLLHMLDRNRRLKLAPERWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
ES+ D++ITCEER +D V + + N PVH+INI+I+DN EEA + +L
Sbjct: 81 ESRTVADVVITCEERCFDAVCDDLLARGGDF-NRPVHIINIEIKDNHEEALIAGKAMLDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
S D+D+EI+ I++ +E+ LLH + FY
Sbjct: 140 ASAIESSNDIDDEIESILKAQQERHPHSLLHAVAFY 175
>gi|395330651|gb|EJF63034.1| Ssu72-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 175
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 99/153 (64%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A+DKPNVY F T Y DIY++L ++D YT NGLL M++RN+RIKL PE++QESK
Sbjct: 25 LPGPAIDKPNVYPF-GTPYNDIYEELQSQDARLYTANGLLQMIDRNRRIKLAPERWQESK 83
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
DI+ITCEER +D V + + N PVH+IN++I+DN EEA L +L +
Sbjct: 84 TVADIVITCEERCFDAVCDDLLARGGDF-NKPVHIINLEIKDNHEEAHLAGKAILDLATA 142
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+D EI+ I+Q +EK + +LH + +Y
Sbjct: 143 IENANDIDEEINGILQAQQEKHPQSVLHAVAYY 175
>gi|242209093|ref|XP_002470395.1| predicted protein [Postia placenta Mad-698-R]
gi|220730565|gb|EED84420.1| predicted protein [Postia placenta Mad-698-R]
Length = 175
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 113/216 (52%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME H LSK G V S GTG S V
Sbjct: 1 MEGHYVLSKAGYRVVSSGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G A+DKPN+Y F T Y DIY++L +D Y+ NGLL ML+RN+RIKL PE++Q
Sbjct: 24 --RLPGPAIDKPNIYAF-GTPYNDIYEELQAQDSRLYSANGLLQMLDRNRRIKLAPERWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
ESK DI+ITCEER +D V + + N PVH+INI+I+DN EEA + +L
Sbjct: 81 ESKTIADIVITCEERCFDAVCDDLLTRGGDF-NRPVHVINIEIKDNHEEAHIAGKAIVDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +D+D ++++I+Q +EK LLH + +Y
Sbjct: 140 AAAIEASDDIDEDMEKILQAHQEKHPHSLLHAVAYY 175
>gi|224135609|ref|XP_002322116.1| predicted protein [Populus trichocarpa]
gi|222869112|gb|EEF06243.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 43/231 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSN NRSMEAH+ L + G DV S+GTG H
Sbjct: 4 RYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGA------------HV------------ 39
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y+ ++ DL KD Y RNG+L ML+
Sbjct: 40 ---------------KLPGPSLREPNVYDF-GTPYKQMFDDLRRKDPELYKRNGILPMLK 83
Query: 126 RNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +KL P+++Q+ + F ++ T EE+V+D VLE N+ L + V +IN++++D
Sbjct: 84 RNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLEDLHNRDHVLLKS-VLVINLEVKD 142
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N EEA +G L EL E ++ IDEI+ FE K R L+++I FY
Sbjct: 143 NHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAFEAKHRRKLVYSISFY 193
>gi|168064189|ref|XP_001784047.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664433|gb|EDQ51153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 43/232 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ A+VC+SN NRSMEAHA L ++G+DV S+GTG H
Sbjct: 3 LRHAMVCASNQNRSMEAHALLQRQGLDVSSYGTGS------------HV----------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F T Y + +DL+ KD Y RNGLL ML
Sbjct: 40 ----------------KLPGPSAREPNVYSF-GTPYRTMLEDLIKKDPELYKRNGLLQML 82
Query: 125 ERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +K P+++Q+ + FD++ T EERV+D V++ N+ +L + +IN+D++
Sbjct: 83 KRNLGVKEAPQRWQDNAADGAFDVVFTFEERVFDMVIDDLGNRETNLLKLAL-IINMDVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +G LA + + + ++EID I+ FE+ R L++TI FY
Sbjct: 142 DNHEEAAIGGKLALDFCLRLEQADAWEDEIDAIISRFEKHHRRRLIYTIRFY 193
>gi|353239192|emb|CCA71113.1| probable SSU72-Nuclear zinc-finger motif containing protein
[Piriformospora indica DSM 11827]
Length = 265
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H L K G DV S GTG S+V
Sbjct: 81 VVCASNQNRSMEGHNVLLKAGYDVISAGTG--------SLV------------------- 113
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G +D PNVY F T Y+ +++DL +D A Y +NGLL ML+RN+
Sbjct: 114 ------------RLPGRTVDTPNVYQF-GTPYQKMWEDLHRQDPALYEQNGLLQMLDRNR 160
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
IK P+++ +++ D++ITCEER +D V + Q N VH+IN++I+DN EEA
Sbjct: 161 NIKTAPQRWADTRKVVDVVITCEERCFDAVCDDL-LQKGGESNRSVHIINMEIKDNHEEA 219
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L + +DLD E+D I+Q LLHT+ FY
Sbjct: 220 LIAGQAMLDLAAAISNADDLDEEMDGIVQRQLATHPHSLLHTVAFY 265
>gi|225435973|ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Vitis vinifera]
gi|296083946|emb|CBI24334.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 126/232 (54%), Gaps = 43/232 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+ A+VCSSN NRSMEAH+ L K+G DV S+GTG H
Sbjct: 3 FRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTG------------AHV----------- 39
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY+F T Y+ ++ DL KD Y RNG+L ML
Sbjct: 40 ----------------KLPGPSLREPNVYEF-GTPYKHMFDDLRRKDPDLYKRNGILPML 82
Query: 125 ERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +K P+++Q+ + FD++ T EE+V+D V+E N+ L T V +IN++++
Sbjct: 83 KRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVEDLHNRDHVLMKT-VLVINLEVK 141
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +GA LA +L E ++ +D+++ FE++ R LL++I FY
Sbjct: 142 DNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGFEKQHRRKLLYSISFY 193
>gi|402217576|gb|EJT97656.1| Ssu72-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 175
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++DKPN+Y F T YEDIYQDLM KD YT NG+L M++RN+ IK PE++QE++
Sbjct: 25 LPGPSIDKPNIYGF-GTPYEDIYQDLMRKDPRLYTANGVLQMIDRNRHIKRAPERWQETR 83
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D++ITCEE+ +D V N+ L N PVH+INI+I+DN EEA L +L S
Sbjct: 84 TMADVVITCEEKCFDSVCIDLLNRGGEL-NRPVHIINIEIKDNVEEALLAGKAILDLASA 142
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ DLD++++ I+ +++E+ +LH + +Y
Sbjct: 143 IEESNDLDSDMEGILSKWQERHPHGVLHALAYY 175
>gi|432090019|gb|ELK23627.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Myotis davidii]
Length = 305
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH---MLERNKRIKLKPEKFQ 138
+ G A DKPNVYDF TT Y+ +Y DL+ KDK Y ++ I L
Sbjct: 152 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYPSESPFQDPSVVVCGTGIVLTHGGHL 210
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
D FD+I+TCEERVYDQV+E N PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 211 GGGDLFDLILTCEERVYDQVVEDL-NSREQETCQPVHVINVDIQDNHEEATLGAFLICEL 269
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEI+E++QEFEEK R LHT+ FY
Sbjct: 270 CQCIQHTEDMENEIEELLQEFEEKSGRTFLHTVCFY 305
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSK 27
MPS+ L+VAVVCSSN NRSMEAH LS
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSS 28
>gi|440889966|gb|ELR44738.1| hypothetical protein M91_02650 [Bos grunniens mutus]
Length = 189
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 122/232 (52%), Gaps = 46/232 (19%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L+VAVVC SNMNRSMEAH+ L KKG +V+SFG G
Sbjct: 4 STLRVAVVCMSNMNRSMEAHSILKKKGFNVRSFGVGS----------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
++ G A + P VYDF +TTYE + +DL+ K++ + NG+L
Sbjct: 41 ----------------HVTLPGLAPNLPVVYDF-STTYEQMCKDLLCKNRMHHKSNGVLQ 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+L RN+RIK P++ D FD I TC ERVY V++ + PV++IN++I+
Sbjct: 84 ILGRNERIKSGPDR-----DPFDAIFTCTERVYKVVVKDLCAREQKTWQ-PVYVINVEIE 137
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D E ATLGA + EL + +D+ + + ++ Q ++K + LHTI FY
Sbjct: 138 DTLEAATLGALIICELCQGLQQEDDMQSSLPKLFQAVKKKTGKSFLHTICFY 189
>gi|440803601|gb|ELR24490.1| RNA polymerase II subunit A Cterminal domain phosphatase SSU72,
putative [Acanthamoeba castellanii str. Neff]
Length = 200
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 42/229 (18%)
Query: 7 VAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFH 66
VA+VC+SNMNRSMEAH L+K G S+GTG+ H
Sbjct: 13 VALVCASNMNRSMEAHLRLAKHGFRASSYGTGN------------HV------------- 47
Query: 67 KVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLER 126
+ G A D+PNVY F T Y+ IY+DL ++ Y +NG+L+MLER
Sbjct: 48 --------------KLPGPAADRPNVYSF-GTPYKTIYEDLKAQNYDLYKQNGVLNMLER 92
Query: 127 NKRIKLKPEKFQ-ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQ 185
N +IK PE++ E+K F+++IT EERV++ V E N+ + P++L+N+ +DN
Sbjct: 93 NMKIKNAPEQWHAEAKQHFNMVITFEERVFEAVYEDMLNRG-APNGQPLYLVNVPTKDNH 151
Query: 186 EEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
EEA + A ++ + +D + DE ++EF+ + RP +T+LF+
Sbjct: 152 EEALIAATQVLQMCKSLMDYDDWEVHFDENLEEFQRRYKRPATYTVLFW 200
>gi|449439211|ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cucumis sativus]
gi|449506693|ref|XP_004162820.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cucumis sativus]
Length = 193
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 43/231 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VCSSN NRSMEAH+ L KG +V S+GTG H
Sbjct: 4 RYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTG------------AHV------------ 39
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G ++ +PNVYDF T Y+ ++ DL KD Y RNG+L ML+
Sbjct: 40 ---------------KLPGPSLREPNVYDF-GTPYKHMFDDLRRKDPELYKRNGILPMLK 83
Query: 126 RNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
RN +K P+++Q+ + FD++ T EE+V+D V+E + + ++ T V ++N++++D
Sbjct: 84 RNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIEDLNTRDHAMMKT-VLIVNLEVKD 142
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
N EEA +GA L +L + E ++ ID+I+ FE++ R LL++I FY
Sbjct: 143 NHEEAAIGARLTFDLCQEIERTESWEDSIDDIVINFEKQLRRKLLYSISFY 193
>gi|164659676|ref|XP_001730962.1| hypothetical protein MGL_1961 [Malassezia globosa CBS 7966]
gi|159104860|gb|EDP43748.1| hypothetical protein MGL_1961 [Malassezia globosa CBS 7966]
Length = 175
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++DKPN+Y F T YE ++QDLM KD Y NGLL ML+RN+ IK PE++QE +
Sbjct: 25 LPGPSIDKPNIYAF-GTPYETMFQDLMKKDSRLYEANGLLPMLDRNRHIKSAPERWQECR 83
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
D++ITCEER +D V E ++ L N PVH+IN++I+DN EEA A L M
Sbjct: 84 RVSDVVITCEERCFDSVCEDLLSRRQEL-NRPVHVINVEIKDNHEEAQKAANAILSLAEM 142
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ D+D ++DEI+++ ++ + PLLHT+ +Y
Sbjct: 143 IEQARDIDEDMDEILEKQQQCFAYPLLHTVAYY 175
>gi|170044257|ref|XP_001849770.1| phosphatase SSU72 [Culex quinquefasciatus]
gi|167867481|gb|EDS30864.1| phosphatase SSU72 [Culex quinquefasciatus]
Length = 111
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEKFQ ++FD+++TCEERVYDQV+E +++ + N PVH+INIDIQ
Sbjct: 1 MLDRNRRIKTCPEKFQLCTERFDVLVTCEERVYDQVIEFMESKTPTY-NLPVHVINIDIQ 59
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEAT+GAF +L++M + +DLDN+IDE++ +FE KC R +LH +LFY
Sbjct: 60 DNHEEATVGAFAICDLITMMAQSDDLDNDIDELLHDFESKCQRSVLHCVLFY 111
>gi|401885170|gb|EJT49296.1| hypothetical protein A1Q1_01596 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A+DKPNVY F T Y+ IY+DL +KD YT NGLL ML+RN+++KL PEK+QE +
Sbjct: 159 LPGPAIDKPNVYRFGTP-YDTIYKDLESKDPKLYTANGLLPMLDRNRKVKLAPEKWQEQR 217
Query: 142 DKF-DIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
+ D++ITCEER YD V + + N P+H+IN++I+DN EEA + EL
Sbjct: 218 NILADVVITCEERCYDAVCDDMLARGGEF-NRPIHVINVEIKDNPEEAHIAGKSILELCQ 276
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
K D+D E+D+I+ + +E+ LLHT+ F+
Sbjct: 277 TIEKARDIDAEMDDILVQHQERHPHALLHTVAFF 310
>gi|115487532|ref|NP_001066253.1| Os12g0168200 [Oryza sativa Japonica Group]
gi|108862247|gb|ABA95913.2| Ssu72-like protein, expressed [Oryza sativa Japonica Group]
gi|113648760|dbj|BAF29272.1| Os12g0168200 [Oryza sativa Japonica Group]
gi|215697487|dbj|BAG91481.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 125/233 (53%), Gaps = 44/233 (18%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
++ A+VCSSNMNRSMEAH+ L + G+DV S+GTG H
Sbjct: 9 MRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGT------------HV----------- 45
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVYDF T Y IY DL KD Y RNGLL ML
Sbjct: 46 ----------------KLPGPSLHEPNVYDF-GTPYNVIYDDLRRKDPDLYKRNGLLPML 88
Query: 125 ERNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +KL P+++Q++ FD+I + EERV+D +++ N+ + + +IN+D++
Sbjct: 89 KRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNREQRMLKNAL-IINMDVK 147
Query: 183 DNQEEATLGAFLASELMSMFIKC-EDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DN EEA +GA LA +L ED + ID+++ FE++ R L + + FY
Sbjct: 148 DNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEKQHKRKLTYNMAFY 200
>gi|45270732|gb|AAS56747.1| YNL222W [Saccharomyces cerevisiae]
Length = 206
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 124/241 (51%), Gaps = 50/241 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
SNLK VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 7 SNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG--------SAV------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 46 ------------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSADRYKSNGLLQ 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+R+K PEK+QES FD + TCEER +D V E N+ L N VH+IN+DI+
Sbjct: 87 MLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDLMNRGGKL-NKIVHVINVDIK 145
Query: 183 DNQEEATLGAFLASELMSMFI----KCEDLD----NEIDEIMQEFEEKCSR-PLLHTILF 233
D+ E A +G+ EL M +CE D + I +I+ E++ S+ P L+ +
Sbjct: 146 DDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDILTEWQSSHSQLPPLYAPSY 205
Query: 234 Y 234
Y
Sbjct: 206 Y 206
>gi|6324107|ref|NP_014177.1| Ssu72p [Saccharomyces cerevisiae S288c]
gi|1711532|sp|P53538.1|SSU72_YEAST RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2
gi|1173490|gb|AAA86497.1| Ssu72p [Saccharomyces cerevisiae]
gi|1302241|emb|CAA96125.1| SSU72 [Saccharomyces cerevisiae]
gi|151944322|gb|EDN62600.1| suppressor of sua7, gene 2 [Saccharomyces cerevisiae YJM789]
gi|190409196|gb|EDV12461.1| protein SSU72 [Saccharomyces cerevisiae RM11-1a]
gi|207341866|gb|EDZ69807.1| YNL222Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272365|gb|EEU07348.1| Ssu72p [Saccharomyces cerevisiae JAY291]
gi|259149142|emb|CAY82384.1| Ssu72p [Saccharomyces cerevisiae EC1118]
gi|285814440|tpg|DAA10334.1| TPA: Ssu72p [Saccharomyces cerevisiae S288c]
gi|323307494|gb|EGA60765.1| Ssu72p [Saccharomyces cerevisiae FostersO]
gi|323331875|gb|EGA73287.1| Ssu72p [Saccharomyces cerevisiae AWRI796]
gi|323335884|gb|EGA77162.1| Ssu72p [Saccharomyces cerevisiae Vin13]
gi|323352871|gb|EGA85173.1| Ssu72p [Saccharomyces cerevisiae VL3]
gi|349580724|dbj|GAA25883.1| K7_Ssu72p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763489|gb|EHN05017.1| Ssu72p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297129|gb|EIW08230.1| Ssu72p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1589662|prf||2211396A SSU72 protein
Length = 206
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 124/241 (51%), Gaps = 50/241 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
SNLK VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 7 SNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG--------SAV------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 46 ------------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSADRYKSNGLLQ 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+R+K PEK+QES FD + TCEER +D V E N+ L N VH+IN+DI+
Sbjct: 87 MLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDLMNRGGKL-NKIVHVINVDIK 145
Query: 183 DNQEEATLGAFLASELMSMFI----KCEDLD----NEIDEIMQEFEEKCSR-PLLHTILF 233
D+ E A +G+ EL M +CE D + I +I+ E++ S+ P L+ +
Sbjct: 146 DDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDILTEWQSSHSQLPSLYAPSY 205
Query: 234 Y 234
Y
Sbjct: 206 Y 206
>gi|321257327|ref|XP_003193550.1| phosphoprotein phosphatase [Cryptococcus gattii WM276]
gi|317460020|gb|ADV21763.1| Phosphoprotein phosphatase, putative [Cryptococcus gattii WM276]
Length = 187
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A+DKPNVY F T Y+DIY+DL ++D YTRNG+L ML+RN+++K PEK+QE K
Sbjct: 36 LPGPAIDKPNVYRF-GTPYDDIYRDLESQDPQLYTRNGILPMLDRNRKVKKAPEKWQELK 94
Query: 142 DKF-DIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
DI+ITCEER YD V + + N P+H+INI+I+DN EEA + EL
Sbjct: 95 SVLADIVITCEERCYDAVCDDLLTRSGEY-NRPIHIINIEIKDNPEEAHIAGQSILELAR 153
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DLD++ID I+ +K LLHT+ FY
Sbjct: 154 AIEASDDLDSDIDAILNAHGDKHPHTLLHTVGFY 187
>gi|406694800|gb|EKC98122.1| hypothetical protein A1Q2_07668 [Trichosporon asahii var. asahii
CBS 8904]
Length = 363
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A+DKPNVY F T Y+ IY+DL +KD YT NGLL ML+RN+++KL PEK+QE +
Sbjct: 212 LPGPAIDKPNVYRF-GTPYDTIYKDLESKDPKLYTANGLLPMLDRNRKVKLAPEKWQEQR 270
Query: 142 DKF-DIIITCEERVYDQVLEHFDNQMISLE---NTPVHLINIDIQDNQEEATLGAFLASE 197
+ D++ITCEER YD V + M++ N P+H+IN++I+DN EEA + E
Sbjct: 271 NILADVVITCEERCYDAVCD----DMLARGGEFNRPIHVINVEIKDNPEEAHIAGKSILE 326
Query: 198 LMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
L K D+D E+D+I+ + +E+ LLHT+ F+
Sbjct: 327 LCQTIEKARDIDAEMDDILVQHQERHPHALLHTVAFF 363
>gi|449550051|gb|EMD41016.1| hypothetical protein CERSUDRAFT_131491 [Ceriporiopsis subvermispora
B]
Length = 175
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 110/216 (50%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME H LSK G V S GTG S V
Sbjct: 1 MEGHYVLSKAGFRVVSSGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G A+DKPN+Y F T Y IY++L +D YT NGLL ML+RN+R+KL PE++Q
Sbjct: 24 --RLPGPAIDKPNIYPF-GTPYNAIYEELQAQDHRLYTANGLLQMLDRNRRLKLAPERWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
ESK D++ITCEER +D V + + N PVH+INI+I+DN EEA + +L
Sbjct: 81 ESKTVADVVITCEERCFDTVCDDLLARGGEY-NKPVHIINIEIKDNHEEAHIAGKAIVDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ D+D ++ +I+Q +EK LLH + +Y
Sbjct: 140 AAAIESSSDIDEDMGKILQAHQEKHPHSLLHAVAYY 175
>gi|58266176|ref|XP_570244.1| phosphoprotein phosphatase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819531|sp|P0CR77.1|SSU72_CRYNB RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|338819532|sp|P0CR76.1|SSU72_CRYNJ RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|57226477|gb|AAW42937.1| phosphoprotein phosphatase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 187
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A+DKPNVY F T Y+DIY+DL ++D YTRNG+L ML+RN+++K PEK+QE K
Sbjct: 36 LPGPAIDKPNVYRF-GTPYDDIYRDLESQDPQLYTRNGILPMLDRNRKVKKAPEKWQELK 94
Query: 142 DKF-DIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D++ITCEER YD V + + N P+H+INI+I+DN EEA + EL
Sbjct: 95 SVLADVVITCEERCYDAVCDDLLTRSGEY-NRPIHIINIEIKDNPEEAHIAGQSILELAR 153
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+DLD++ID I+ +K LLHT+ FY
Sbjct: 154 AIEASDDLDSDIDAILNAHGDKHPHTLLHTVGFY 187
>gi|365758761|gb|EHN00588.1| Ssu72p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840334|gb|EJT43195.1| SSU72-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 206
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 106/200 (53%), Gaps = 41/200 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
SNL+ VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 7 SNLRFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG--------SAV------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 46 ------------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSADRYKSNGLLQ 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+R+K PEK+QES FD + TCEER +D V E N+ L N VH+IN+DI+
Sbjct: 87 MLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDLMNRGGKL-NRIVHVINVDIK 145
Query: 183 DNQEEATLGAFLASELMSMF 202
D+ E A +G+ EL +F
Sbjct: 146 DDDENAKIGSKAILELADIF 165
>gi|409080008|gb|EKM80369.1| hypothetical protein AGABI1DRAFT_99972 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198227|gb|EKV48153.1| hypothetical protein AGABI2DRAFT_149982 [Agaricus bisporus var.
bisporus H97]
Length = 175
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME H LSK G V S GTG S V
Sbjct: 1 MEGHFVLSKAGYRVISSGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++DKPN+Y F T Y IY++L +KD YT NGLL ML+RN+ IKL PE++Q
Sbjct: 24 --RLPGPSIDKPNIYPF-GTPYNAIYEELTSKDPRLYTANGLLQMLDRNRHIKLAPERWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
+++ D++ITCEER +D V + ++ N PVH++N++I+DN EEA + +L
Sbjct: 81 DTRTVADVVITCEERCFDAVCDDLLSRGGDF-NKPVHIVNMEIKDNHEEALIAGKAMLDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ EDLD +ID+I+Q +E+ LLH + +Y
Sbjct: 140 AAAIDATEDLDEDIDKILQAQQERHPHSLLHAVAYY 175
>gi|259481633|tpe|CBF75334.1| TPA: transcription/RNA-processing factor Ssu72 (AFU_orthologue;
AFUA_2G03760) [Aspergillus nidulans FGSC A4]
Length = 263
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 52/230 (22%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 50 LRFCTVCASNQNRSMEAHLRLSTAASPFPVISFGTG--------SLV------------- 88
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F++T+Y +Y +L++KD+ Y NG+L+
Sbjct: 89 ------------------RLPGPSITQPNVYNFNSTSYSQMYDELLSKDERLYRNNGILN 130
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+ +K PE+FQ+ D+IITCEER +D V++ N+ +L N PVH+ N+DI+
Sbjct: 131 MLDRNRNVKWGPERFQDWGGVVDVIITCEERCWDAVVDDLLNKGSTL-NRPVHVFNVDIK 189
Query: 183 DNQEEATLGAFLASELMSMF----------IKCEDLDNEIDEIMQEFEEK 222
DN EEA +G EL + + +N E + F+EK
Sbjct: 190 DNHEEALVGGKAILELATRLNEVATQEQKALGSGGWENGTGEARRSFDEK 239
>gi|448114684|ref|XP_004202638.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
gi|359383506|emb|CCE79422.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
Length = 222
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 133/263 (50%), Gaps = 75/263 (28%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
NLK+ VC+SN NRSME+H L G DVKSFGTG S V
Sbjct: 4 GNLKICTVCASNNNRSMESHKQLRDAGYDVKSFGTG--------SAV------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLL 121
+ G ++DKPNVY+F T YE IYQDLM+++ + Y NGL+
Sbjct: 43 ------------------RLPGPSIDKPNVYEF-GTPYESIYQDLMSQECRKMYESNGLI 83
Query: 122 HMLERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHF---------DNQMISLE 170
HM++RN+ IK PEK+ + KFD++ITCEER +D VLE DN++ +
Sbjct: 84 HMIDRNRHIKRAPEKWHSNSYAGKFDLVITCEERCFDSVLEDLMTRLCIKSKDNEVKQV- 142
Query: 171 NTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED------------------LDNEI 212
VH+IN+DI+D+ E A +G +L++M + + LD++I
Sbjct: 143 ---VHIINVDIKDDNENAVIGGKGILKLVNMIHEFHNKSKNDRINKSYEDESSIILDDQI 199
Query: 213 DEIMQEFE-EKCSRPLLHTILFY 234
I+ E++ E P L+++ +Y
Sbjct: 200 IRILAEWQKEHTHLPTLYSVAYY 222
>gi|392580516|gb|EIW73643.1| hypothetical protein TREMEDRAFT_26308, partial [Tremella
mesenterica DSM 1558]
Length = 169
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A+DKPNVY F T Y+ IY+DL +KD+A YTRNGLL ML+RN+++K PEK+QE K
Sbjct: 18 LPGPAIDKPNVYRF-GTPYDVIYRDLDSKDRALYTRNGLLPMLDRNRKVKTAPEKWQEQK 76
Query: 142 DKF-DIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D++ITCEER +D V + + N P+H+IN++I+DN EEA + EL
Sbjct: 77 AVLADVVITCEERCFDAVCDDLYARGGEY-NRPIHVINVEIKDNPEEALIAGQSILELAR 135
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
DLD EID I+Q +K L HT+ F+
Sbjct: 136 SIEAASDLDEEIDTILQLHSDKHPHTLSHTVAFF 169
>gi|302696725|ref|XP_003038041.1| hypothetical protein SCHCODRAFT_12799 [Schizophyllum commune H4-8]
gi|300111738|gb|EFJ03139.1| hypothetical protein SCHCODRAFT_12799 [Schizophyllum commune H4-8]
Length = 190
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 112/226 (49%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
V+ S NRSME H L K G V S+GTG S V
Sbjct: 6 VIHCSLQNRSMEGHFVLMKAGYRVCSYGTG--------SAV------------------- 38
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++DKPN+Y F T Y IY++L KD YT NGLL ML+RN+
Sbjct: 39 ------------RLPGPSIDKPNIYPF-GTPYNAIYEELQAKDARLYTANGLLQMLDRNR 85
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+KL PE++QE + D++ITCEER +D V + + N PVH+INI+I DN EEA
Sbjct: 86 NVKLAPERWQEGRTMADVVITCEERCFDAVCDDLLTRGGDY-NRPVHVINIEITDNHEEA 144
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ EL + DLD ++++I+Q EK +H + +Y
Sbjct: 145 LKAGKIMLELAAAIEASADLDEDMEKIVQRSREKHPHNFIHVVAYY 190
>gi|448112113|ref|XP_004202012.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
gi|359465001|emb|CCE88706.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
Length = 222
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 114/212 (53%), Gaps = 56/212 (26%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
NLK+ VC+SN NRSME+H L G DVKSFGTG S V
Sbjct: 4 GNLKICTVCASNNNRSMESHKQLRDAGYDVKSFGTG--------SAV------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLL 121
+ G ++DKPNVY+F T YE+IYQDLM+++ + Y NGL+
Sbjct: 43 ------------------RLPGPSIDKPNVYEF-GTPYENIYQDLMSQECRKMYESNGLI 83
Query: 122 HMLERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHF---------DNQMISLE 170
HM++RN+ IK PEK+ + KFD++ITCEER +D VLE DN++ +
Sbjct: 84 HMIDRNRHIKRAPEKWHSNSYAGKFDLVITCEERCFDSVLEDLMTRLCIKTKDNEVKQI- 142
Query: 171 NTPVHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+IN+DI+D+ E A +G +L++M
Sbjct: 143 ---VHIINVDIKDDNENAVIGGKGILKLVNMI 171
>gi|45185040|ref|NP_982757.1| ABL190Wp [Ashbya gossypii ATCC 10895]
gi|74695614|sp|Q75E60.1|SSU72_ASHGO RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|44980676|gb|AAS50581.1| ABL190Wp [Ashbya gossypii ATCC 10895]
gi|374105959|gb|AEY94869.1| FABL190Wp [Ashbya gossypii FDAG1]
Length = 281
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 126/245 (51%), Gaps = 52/245 (21%)
Query: 1 MP--SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCS 58
MP S L++ VC+SN NRSME+H L + G DV S+GTG S V
Sbjct: 78 MPNTSTLRLCTVCASNNNRSMESHRVLKEAGYDVSSYGTG--------SAV--------- 120
Query: 59 ELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRN 118
+ G ++DKPNVY F T Y DIY DL+ + Y N
Sbjct: 121 ----------------------RLPGLSIDKPNVYPF-GTPYNDIYNDLLAQSAERYKSN 157
Query: 119 GLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLIN 178
GLL ML+RN+RIK PEK+ +S+ FD + TCEER +D V E N+ L N VH+IN
Sbjct: 158 GLLEMLDRNRRIKKAPEKWHDSQKVFDFVFTCEERCFDSVCEDLMNRGGQL-NKIVHVIN 216
Query: 179 IDIQDNQEEATLGAF----LASELMSMFIKCED----LDNEIDEIMQEFEEKCSR-PLLH 229
+DI+D+ E A +G L L S +C+ ++ I +++ ++++ + PLL+
Sbjct: 217 LDIRDDNENAKIGGRAMLELVKALNSKMQECDQQGVPFEDTIMDVVADWQQAHPQLPLLY 276
Query: 230 TILFY 234
+ +Y
Sbjct: 277 SPAYY 281
>gi|50307869|ref|XP_453928.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606159|sp|Q6CQ61.1|SSU72_KLULA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|49643062|emb|CAH01024.1| KLLA0D19514p [Kluyveromyces lactis]
Length = 207
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 50/241 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S LK VC+SN NRSME+H L + G DV S+GTG S V
Sbjct: 8 SGLKFCTVCASNNNRSMESHRVLEEAGYDVSSYGTG--------SAV------------- 46
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y+DIY DL+++ + Y +NG+L
Sbjct: 47 ------------------RLPGLSIDKPNVYSF-GTPYDDIYNDLISQSEDRYKQNGVLE 87
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+++K PEK+ + + FD + TCEER +D V E N+ L N H+INIDI+
Sbjct: 88 MLDRNRKLKKAPEKWHDGRKVFDFVFTCEERCFDSVCEDLMNRGGQL-NLIAHIINIDIK 146
Query: 183 DNQEEATLGA----FLASELMSMFIKCE----DLDNEIDEIMQEFEEKCSR-PLLHTILF 233
D+ E A +G LA L +CE ++ I ++ E++EK + PL ++ +
Sbjct: 147 DDNENAKIGGRAILRLADMLRDKVFECEKNGTQFEDFIMDVFTEWQEKYPKLPLTYSAAY 206
Query: 234 Y 234
Y
Sbjct: 207 Y 207
>gi|125578629|gb|EAZ19775.1| hypothetical protein OsJ_35355 [Oryza sativa Japonica Group]
Length = 214
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 129/249 (51%), Gaps = 60/249 (24%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
++ A+VCSSNMNRSMEAH+ L + G+DV S+GTG H
Sbjct: 7 MRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGT------------HV----------- 43
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVYDF T Y IY DL KD Y RNGLL ML
Sbjct: 44 ----------------KLPGPSLHEPNVYDF-GTPYNVIYDDLRRKDPDLYKRNGLLPML 86
Query: 125 ERNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +KL P+++Q++ FD+I + EERV+D +++ N+ + + +IN+D++
Sbjct: 87 KRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNREQRMLKNAL-IINMDVK 145
Query: 183 DNQEEATLGAFLASELMS---------------MFIKCEDLDNE--IDEIMQEFEEKCSR 225
DN EEA +GA LA +L +F++ D D E ID+++ FE++ R
Sbjct: 146 DNHEEAGVGAKLALDLCQKPSLLDQHMLDGLGWVFLEGADEDWEEIIDDLIITFEKQHKR 205
Query: 226 PLLHTILFY 234
L + + FY
Sbjct: 206 KLTYNMAFY 214
>gi|354544957|emb|CCE41682.1| hypothetical protein CPAR2_802320 [Candida parapsilosis]
Length = 220
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 115/210 (54%), Gaps = 54/210 (25%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L+ G DV SFGTG S V
Sbjct: 5 SLKICTVCASNNNRSMESHKQLADAGYDVHSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLLH 122
+ G ++DKPNVY F T YE IYQDL+N++ + Y +NG+LH
Sbjct: 43 -----------------RLPGPSIDKPNVYSF-GTPYEKIYQDLLNQNARKSYEQNGVLH 84
Query: 123 MLERNKRIKLKPEKFQES--KDKFDIIITCEERVYDQVLEHFDNQMISLENTP------- 173
MLERNK +K PEK+QE+ KFD++ITCEER +D V+E M+ + N+
Sbjct: 85 MLERNKSVKTAPEKWQENAYAGKFDLVITCEERCFDSVVEDL---MLRMYNSNSQSDLKS 141
Query: 174 -VHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+IN++I+D+ E A +G +L++M
Sbjct: 142 IVHVINVEIKDDNENAIIGGKGILKLVNMI 171
>gi|344229796|gb|EGV61681.1| Ssu72-like protein [Candida tenuis ATCC 10573]
Length = 230
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 111/213 (52%), Gaps = 55/213 (25%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+P +L+V VC++N NRSMEAH L G ++KSFGTG S V
Sbjct: 9 VPDSLRVCTVCAANNNRSMEAHKQLKDAGYNIKSFGTG--------SAV----------- 49
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNG 119
+ G +DKPNVY F T YEDIY DLM++D + Y NG
Sbjct: 50 --------------------RLPGPTIDKPNVYQF-GTPYEDIYNDLMSQDCRKLYESNG 88
Query: 120 LLHMLERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHFDNQMISLENTP---- 173
L+HML RNK++K PE++ + KFD++ITCEER +D V+ D+ M L N
Sbjct: 89 LIHMLTRNKQVKRAPERWHANSYAGKFDLVITCEERCFDSVV---DDLMFRLHNNDYNDN 145
Query: 174 -----VHLINIDIQDNQEEATLGAFLASELMSM 201
VH+INIDI+D+ E A +G +L+ M
Sbjct: 146 EVKQVVHIINIDIKDDNENAVIGGNGIVKLVGM 178
>gi|50292029|ref|XP_448447.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609021|sp|Q6FMU7.1|SSU72_CANGA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|49527759|emb|CAG61408.1| unnamed protein product [Candida glabrata]
Length = 204
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 101/198 (51%), Gaps = 41/198 (20%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 7 LKFCTVCASNNNRSMESHRILQEAGYEVSSYGTG--------SAV--------------- 43
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + DKPNVY F T Y DIY DL+++ Y NGLL ML
Sbjct: 44 ----------------RLPGLSFDKPNVYPF-GTPYNDIYNDLLSQSAERYKANGLLQML 86
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+R+K PEK+QE FD + TCEER +D V E N+ L N VH+INIDI+D+
Sbjct: 87 DRNRRLKKAPEKWQEGTKTFDFVFTCEERCFDAVCEDLMNRGGRL-NKIVHVINIDIRDD 145
Query: 185 QEEATLGAFLASELMSMF 202
E A +G EL +M
Sbjct: 146 NENAKIGGRAILELANML 163
>gi|363754891|ref|XP_003647661.1| hypothetical protein Ecym_6473 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891298|gb|AET40844.1| hypothetical protein Ecym_6473 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 111/212 (52%), Gaps = 47/212 (22%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
SNLK+ VC+SN NRSME+H L + G DV S+GTG S V
Sbjct: 10 SNLKLCTVCASNNNRSMESHRVLKEAGYDVSSYGTG--------SAV------------- 48
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 49 ------------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSAERYKSNGLLE 89
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN++IK PEK+ + FD + TCEER +D V E N+ L N VH+IN+DI+
Sbjct: 90 MLDRNRKIKKAPEKWHDCNKVFDFVFTCEERCFDSVCEDLMNRGGQL-NKIVHVINLDIR 148
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDE 214
D+ E A +G EL+ + L+++IDE
Sbjct: 149 DDNENAKIGGKAMLELV------DQLNSKIDE 174
>gi|358415769|ref|XP_003583201.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
A C-terminal domain phosphatase SSU72-like protein
3-like [Bos taurus]
gi|359073253|ref|XP_003587042.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
A C-terminal domain phosphatase SSU72-like protein
3-like [Bos taurus]
Length = 238
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 115/225 (51%), Gaps = 44/225 (19%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
+VC SNMN+SMEAH+ L KKG +V+SFG G C L P
Sbjct: 50 GLVCMSNMNKSMEAHSILKKKGFNVRSFGVGS--------------CMTLPGLAP----- 90
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
P VYDF +TT E +DL+ KD+ Y+ +G+ H L RN
Sbjct: 91 ---------------------XPVVYDF-STTNEXKCKDLLLKDQVCYSSSGVFHTLGRN 128
Query: 128 KRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDIQDNQE 186
+ IK PE FQE D FD+I TC ERVY V++ D + + PVH+IN+D++D +
Sbjct: 129 EIIKPCPEXFQECTDPFDVIFTCAERVYKMVVKDLCDREQKPWQ--PVHVINLDVKDTLK 186
Query: 187 EATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTI 231
A+LGA + EL + +D+ + + E++ ++K R LHT+
Sbjct: 187 AASLGASITCELYQGLQQADDMQSSLAELLPAAKQKTGRSFLHTV 231
>gi|448509146|ref|XP_003866068.1| Ssu72 protein [Candida orthopsilosis Co 90-125]
gi|380350406|emb|CCG20628.1| Ssu72 protein [Candida orthopsilosis Co 90-125]
Length = 220
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 113/210 (53%), Gaps = 54/210 (25%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L+ G DV SFGTG S V
Sbjct: 5 SLKICTVCASNNNRSMESHKQLADAGYDVHSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLLH 122
+ G ++DKPNVY+F T YE IYQDL+ ++ + Y NG+LH
Sbjct: 43 -----------------RLPGPSIDKPNVYNF-GTPYEKIYQDLLKQNARKLYESNGVLH 84
Query: 123 MLERNKRIKLKPEKFQES--KDKFDIIITCEERVYDQVLEHFDNQMISLENTP------- 173
MLERNK +K PEK+QE+ KFD++ITCEER +D VLE M + NT
Sbjct: 85 MLERNKSVKTAPEKWQENAYAGKFDLVITCEERCFDSVLEDL---MFRMYNTNSQQDLKS 141
Query: 174 -VHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+IN++I+D+ E A +G +L++M
Sbjct: 142 VVHVINVEIKDDNENAIIGGKGILKLVNMI 171
>gi|366995233|ref|XP_003677380.1| hypothetical protein NCAS_0G01400 [Naumovozyma castellii CBS 4309]
gi|342303249|emb|CCC71027.1| hypothetical protein NCAS_0G01400 [Naumovozyma castellii CBS 4309]
Length = 208
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 119/241 (49%), Gaps = 54/241 (22%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME+H L + G DV S+GTG S V
Sbjct: 11 LKFCTVCASNNNRSMESHKVLQEAGYDVSSYGTG--------SAV--------------- 47
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL ML
Sbjct: 48 ----------------RLPGLSIDKPNVYAF-GTPYNDIYNDLLSQSAERYKANGLLQML 90
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
+RN+R+K PEK+ + FD + TCEER +D V E N+ +L N VH+INIDI+D+
Sbjct: 91 DRNRRLKKAPEKWHTNSKTFDFVFTCEERCFDSVCEDLMNRGGNL-NKMVHVINIDIKDD 149
Query: 185 QEEATLGAFLASELMSM-----------FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
E A +G EL M +I ED +I I Q ++ + PLL++ F
Sbjct: 150 NENAKIGGKGILELADMLGAKVKECDESYIPFEDCIMDILAIWQ--QDHPNLPLLYSPAF 207
Query: 234 Y 234
Y
Sbjct: 208 Y 208
>gi|126133545|ref|XP_001383297.1| hypothetical protein PICST_30447 [Scheffersomyces stipitis CBS
6054]
gi|126095446|gb|ABN65268.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 62/253 (24%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSMEAH L G DVKSFGTG S V
Sbjct: 5 SLKICTVCASNNNRSMEAHKQLKDAGYDVKSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLLH 122
+ G ++DKPNVY+F T YEDIY DL++++ + Y NGL+H
Sbjct: 43 -----------------RLPGPSIDKPNVYEF-GTPYEDIYNDLISQNCRKMYEANGLIH 84
Query: 123 MLERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHFDNQMISLENTP-----VH 175
ML+RN+ +K PEK+ + KFD++ITCEER +D V++ +M S + VH
Sbjct: 85 MLDRNRHVKPAPEKWHSNSYAGKFDLVITCEERCFDSVMDDLMFRMYSRNDESDVKQIVH 144
Query: 176 LINIDIQDNQEEATLGAFLASELMSMFIK--------CED-----LDNEIDEIMQEFE-E 221
+IN+DI+D+ E A LG +L++M + ED L++++ I+ E++ E
Sbjct: 145 VINVDIKDDNENALLGGKGILKLVTMIHEFRQKKKDAVEDESDVILEDQMMSILTEWQKE 204
Query: 222 KCSRPLLHTILFY 234
P L+ I +Y
Sbjct: 205 NTHLPTLYGISYY 217
>gi|254584594|ref|XP_002497865.1| ZYRO0F15312p [Zygosaccharomyces rouxii]
gi|238940758|emb|CAR28932.1| ZYRO0F15312p [Zygosaccharomyces rouxii]
Length = 206
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 124/241 (51%), Gaps = 50/241 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+LK VC+SN NRSME+H L + G V S+GTG S V
Sbjct: 7 SDLKFCTVCASNNNRSMESHKVLQEAGYSVSSYGTG--------SAV------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+ + Y NGLL
Sbjct: 46 ------------------RLPGLSIDKPNVYQF-GTPYNDIYNDLLFQSAERYKSNGLLQ 86
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+++K PEK+Q++ + FD++ TCEER +D V E + +L N VH+IN+DI+
Sbjct: 87 MLDRNRKLKKAPEKWQDNHELFDVVFTCEERCFDAVCEDLMGRGGNL-NKIVHVINVDIK 145
Query: 183 DNQEEATLGAFLASELMSMFIK--CEDLDNEID------EIMQEFEEK-CSRPLLHTILF 233
D+ E A +G +L M K E +I +I+ +++EK + P+L++ +
Sbjct: 146 DDNENAKIGGLAILKLADMLTKKVTESRKGQIPFEDCMMDILTDWQEKHPNLPVLYSPAY 205
Query: 234 Y 234
Y
Sbjct: 206 Y 206
>gi|119622991|gb|EAX02586.1| hCG1991759, isoform CRA_b [Homo sapiens]
Length = 166
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 105/187 (56%), Gaps = 48/187 (25%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT ES V
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT--------ESHV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+
Sbjct: 43 --------------------RLPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRERYTRNGI 81
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLI 177
LH+L RN+RIK PE+FQE D FD+I TCEE VYD V+E + S E PVH
Sbjct: 82 LHILGRNERIKPGPERFQECTDSFDVIFTCEESVYDTVVE----DLCSREQQTFQPVHQS 137
Query: 178 NIDIQDN 184
+ D++DN
Sbjct: 138 D-DMEDN 143
>gi|125535907|gb|EAY82395.1| hypothetical protein OsI_37609 [Oryza sativa Indica Group]
Length = 214
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 128/249 (51%), Gaps = 60/249 (24%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
++ A+VCSSNMNRSMEAH+ L + G+DV S+GTG H
Sbjct: 7 MRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTG------------THV----------- 43
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVYDF T Y IY DL KD Y RNGLL ML
Sbjct: 44 ----------------KLPGPSLHEPNVYDF-GTPYNVIYDDLRRKDPDLYKRNGLLPML 86
Query: 125 ERNKRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+RN +KL P+++Q++ FD+I + EERV+D +++ N+ + + +IN+D++
Sbjct: 87 KRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNREQRMLKNAL-IINMDVK 145
Query: 183 DNQEEATLGAFLASELMS---------------MFIKCEDLDNE--IDEIMQEFEEKCSR 225
DN EEA +GA LA +L + ++ D D E ID+++ FE++ R
Sbjct: 146 DNHEEAGVGAKLALDLCQKPSLLDQHMLDGLGWVLLEGADEDWEEIIDDLIITFEKQHKR 205
Query: 226 PLLHTILFY 234
L + + FY
Sbjct: 206 KLTYNMAFY 214
>gi|431919134|gb|ELK17886.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 171
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 116/236 (49%), Gaps = 67/236 (28%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS L++AVVC SNMNRSMEAH+ L KKG V+SFG G C +
Sbjct: 1 MPSFPLRLAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGS-----------------CVK 43
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
L G P VYDF +TTY+ I
Sbjct: 44 L----------------------PGPTPTLPVVYDF-STTYKQI---------------- 64
Query: 120 LLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLIN 178
N+RIK +PE+FQE D+FD+I TCEE VYD+V+ + +L+ PVH++N
Sbjct: 65 -------NERIKPRPERFQECSDRFDVIFTCEESVYDRVVADLCAREQETLQ--PVHVVN 115
Query: 179 IDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D++D A LGA + EL EDL+ ++D+++ E+K + LHT+ FY
Sbjct: 116 VDVKDTLRGAALGAVIICELCQGLQDVEDLEGDLDKLLLAVEKKTGKSFLHTVCFY 171
>gi|301792953|ref|XP_002931443.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like, partial
[Ailuropoda melanoleuca]
Length = 136
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 96/139 (69%), Gaps = 4/139 (2%)
Query: 97 TTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYD 156
+TTY+ +Y+DL KD Y+RNG+L++L RN RIK +PE+FQE D FD+I TCEE VYD
Sbjct: 1 STTYKRMYEDLCRKDWECYSRNGILYLLGRNDRIKPRPERFQECSDPFDVIFTCEEGVYD 60
Query: 157 QVLEHF-DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEI 215
+V++ + ++ + PVH++N+DI D E+AT+GAF+ EL + +D+D+ +D++
Sbjct: 61 RVVQELCAREQVTFQ--PVHVVNVDIADTLEDATVGAFIICELCQSLQQADDVDS-LDQL 117
Query: 216 MQEFEEKCSRPLLHTILFY 234
+ EEK + LHT+ FY
Sbjct: 118 LLAAEEKTGKSFLHTVCFY 136
>gi|281337203|gb|EFB12787.1| hypothetical protein PANDA_022586 [Ailuropoda melanoleuca]
Length = 137
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 96/139 (69%), Gaps = 4/139 (2%)
Query: 97 TTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYD 156
+TTY+ +Y+DL KD Y+RNG+L++L RN RIK +PE+FQE D FD+I TCEE VYD
Sbjct: 2 STTYKRMYEDLCRKDWECYSRNGILYLLGRNDRIKPRPERFQECSDPFDVIFTCEEGVYD 61
Query: 157 QVLEHF-DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEI 215
+V++ + ++ + PVH++N+DI D E+AT+GAF+ EL + +D+D+ +D++
Sbjct: 62 RVVQELCAREQVTFQ--PVHVVNVDIADTLEDATVGAFIICELCQSLQQADDVDS-LDQL 118
Query: 216 MQEFEEKCSRPLLHTILFY 234
+ EEK + LHT+ FY
Sbjct: 119 LLAAEEKTGKSFLHTVCFY 137
>gi|358056988|dbj|GAA97119.1| hypothetical protein E5Q_03794 [Mixia osmundae IAM 14324]
Length = 253
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 41/226 (18%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SNMNRSME H L++ +V S GTG
Sbjct: 69 VVCASNMNRSMEGHNVLAQANFNVISAGTGS----------------------------- 99
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G A+D+PNVY F T Y+D+ DL +KD+ YT GL+ MLERN+
Sbjct: 100 ----------MVRLPGPALDRPNVYAF-GTPYDDMMADLKSKDEKLYTSYGLMAMLERNR 148
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+K PE++Q+S DI+ITCEER Y+ V E ++ + N PVH+IN++I+DN E+A
Sbjct: 149 VLKRAPERWQDSAAVADIVITCEERCYEAVCEDLLSRGGEM-NRPVHVINVEIKDNHEDA 207
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +L +D D +++ I+ +E+ + ++HT+ +Y
Sbjct: 208 LVAGKALLDLCQAIDAADDADADMEAIIDAHQERHPQTVMHTLAWY 253
>gi|428184872|gb|EKX53726.1| hypothetical protein GUITHDRAFT_64039 [Guillardia theta CCMP2712]
Length = 198
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 119/232 (51%), Gaps = 45/232 (19%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L A VCSSNMNRSMEAH L G +V SFGTG
Sbjct: 8 LNFATVCSSNMNRSMEAHKQLLHSGFNVTSFGTG-------------------------- 41
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
N+ + G + DKPNVY+F T Y +I DL KD+ Y NGL+ ML
Sbjct: 42 ----------TNV---RLPGPSQDKPNVYEF-GTPYAEILVDLQRKDENLYRNNGLIAML 87
Query: 125 ERNKRIKLKPEKFQ--ESKDKFDIIITCEERVYDQVLEHFDNQMISLEN-TPVHLINIDI 181
+RN +K PE++Q + K D+++T EERV+D VL+ D Q EN +H+IN++
Sbjct: 88 QRNVNVKRAPERWQDMDQNRKLDVVLTYEERVFDAVLQ--DLQGRESENMRAMHVINLET 145
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
D EEA + A +L M DL++EI E++ +FE+ R ++++++
Sbjct: 146 IDKHEEAVIAAQDTCQLCRMLESAADLESEIMEVLSKFEKNSKRSFMYSLVY 197
>gi|170090828|ref|XP_001876636.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648129|gb|EDR12372.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 149
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 99/184 (53%), Gaps = 41/184 (22%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSME H LSK G V S GTG S V
Sbjct: 1 VVCASNQNRSMEGHHVLSKAGYQVISSGTG--------SAV------------------- 33
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++DKPN+Y F T Y IY++L +KD YT NGLL ML+RN+
Sbjct: 34 ------------RLPGPSIDKPNIYPF-GTPYNTIYEELNSKDPRLYTANGLLPMLDRNR 80
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
R+KL PE++Q+S+ DI++TCEER +D V + + N PVH+IN++I+DN EEA
Sbjct: 81 RLKLAPERWQDSRTVADIVVTCEERCFDAVCDDLLTRGGEF-NKPVHVINMEIKDNHEEA 139
Query: 189 TLGA 192
+
Sbjct: 140 LIAG 143
>gi|255711726|ref|XP_002552146.1| KLTH0B08250p [Lachancea thermotolerans]
gi|238933524|emb|CAR21708.1| KLTH0B08250p [Lachancea thermotolerans CBS 6340]
Length = 206
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 50/240 (20%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK VC+SN NRSME+H L + G DV S+GTG S V
Sbjct: 8 SLKFCTVCASNNNRSMESHRVLREAGYDVSSYGTG--------SAV-------------- 45
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G + DKPNVY F T Y DIY DL ++ Y NGLL M
Sbjct: 46 -----------------RLPGLSEDKPNVYAF-GTPYNDIYNDLRSQSVERYRSNGLLEM 87
Query: 124 LERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
L+RN+++K PEK+QE FD + TCEER +D V E N+ L N VH+INI+I+D
Sbjct: 88 LDRNRKLKKAPEKWQEGFKVFDFVFTCEERCFDAVCEDLMNRGGQL-NKIVHVININIRD 146
Query: 184 NQEEATLGAFLASELMSMF----IKCED----LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
+ E A +G+ +L M ++CE L++ I ++ +++E + PLL++ +Y
Sbjct: 147 DNENAKIGSKAILKLADMLSQETVRCEKTGEPLEDCIISLLAQWQEMYPQLPLLYSPAYY 206
>gi|444321669|ref|XP_004181490.1| hypothetical protein TBLA_0G00210 [Tetrapisispora blattae CBS 6284]
gi|387514535|emb|CCH61971.1| hypothetical protein TBLA_0G00210 [Tetrapisispora blattae CBS 6284]
Length = 202
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 42/199 (21%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ G +V+S+GTG S V
Sbjct: 4 LKFCTVCASNNNRSMEAHKVLSEAGYNVESYGTG--------SAV--------------- 40
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++DKPNVY F T Y DIY DL+++ + YT NGLL ML
Sbjct: 41 ----------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSQTRYTSNGLLQML 83
Query: 125 ERNKRIKLKPEKFQESKDK-FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
+RN++IK P+++QE + FDI+ TCEER +D V + + +E + VH+ N++I+D
Sbjct: 84 DRNRKIKKAPQRWQEEHSRTFDIVFTCEERCFDAVCDDLRTRN-GIEGSIVHIFNVEIRD 142
Query: 184 NQEEATLGAFLASELMSMF 202
+ E A G EL M
Sbjct: 143 DNENAKTGGQAIRELADML 161
>gi|389637074|ref|XP_003716177.1| RNA polymerase II subunit A domain phosphatase SSU72 [Magnaporthe
oryzae 70-15]
gi|58257467|gb|AAW69355.1| SSU72 protein-like protein [Magnaporthe grisea]
gi|194338877|gb|ACF49355.1| Ssu72 [Magnaporthe oryzae]
gi|351641996|gb|EHA49858.1| RNA polymerase II subunit A domain phosphatase SSU72 [Magnaporthe
oryzae 70-15]
gi|440469231|gb|ELQ38348.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Magnaporthe oryzae Y34]
gi|440481003|gb|ELQ61632.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Magnaporthe oryzae P131]
Length = 259
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LSK V SFGTG S+V
Sbjct: 29 LKFCTVCASNQNRSMEAHLQLSKANYPVISFGTG--------SLV--------------- 65
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F++T+Y+ +Y++L KD+ YT NG+L+ML
Sbjct: 66 ----------------RLPGPTITQPNVYKFNSTSYDAMYKELEGKDRRLYTANGILNML 109
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
ERN+ +K PE++Q+ + D+ DI+ TCEER +D V+E +
Sbjct: 110 ERNRNVKRGPERWQDWQIGIPRLEHASDRGSEGTEAGVVDIVFTCEERCWDAVVEDLHAR 169
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN+DI+DN EEA +G
Sbjct: 170 GSPL-NRPVHVINVDIKDNHEEAAVGG 195
>gi|365988212|ref|XP_003670937.1| hypothetical protein NDAI_0F03760 [Naumovozyma dairenensis CBS 421]
gi|343769708|emb|CCD25694.1| hypothetical protein NDAI_0F03760 [Naumovozyma dairenensis CBS 421]
Length = 204
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 120/243 (49%), Gaps = 54/243 (22%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
++LK VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 5 TDLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG--------SAV------------- 43
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 44 ------------------RLPGLSIDKPNVYPF-GTPYNDIYNDLLSQSPERYKANGLLQ 84
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+++K PEK+Q + FD + TCEER +D V E + L N VH+INIDI+
Sbjct: 85 MLDRNRKLKKAPEKWQTNTKTFDFVFTCEERCFDAVCEDLMLRGGHL-NQMVHIINIDIK 143
Query: 183 DNQEEATLGAFLASELMSM-----------FIKCEDLDNEIDEIMQEFEEKCSRPLLHTI 231
D+ E A +G +L M FI ED+ +I I Q+ K PLL++
Sbjct: 144 DDNENAKIGGKAILKLADMLSEKVQECEESFIPFEDIIMDILAIWQQDHPKL--PLLYSP 201
Query: 232 LFY 234
FY
Sbjct: 202 GFY 204
>gi|159473515|ref|XP_001694879.1| hypothetical protein CHLREDRAFT_130182 [Chlamydomonas reinhardtii]
gi|158276258|gb|EDP02031.1| predicted protein [Chlamydomonas reinhardtii]
Length = 199
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 119/232 (51%), Gaps = 46/232 (19%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A+VC++N NRSME+HA L K G+ V S+G G
Sbjct: 9 AMVCAANNNRSMESHAMLKKHGMHVSSYGVG----------------------------- 39
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
+ G + +PNVY F T Y+ I+ DL +KD Y RNGLL ML RN
Sbjct: 40 ----------AHVKLPGPSQKEPNVYKF-GTPYKVIHDDLESKDPELYARNGLLTMLRRN 88
Query: 128 KRIKLKPEKFQESK-----DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+K PE+FQ++ D FD+++T EERV +QV+E NQ + P+ + N+D++
Sbjct: 89 MGVKTAPERFQDNSGGNVLDHFDVVVTFEERVMEQVIEDM-NQRSQVTLQPLLVCNLDVK 147
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+ EEA A L +L M + + ++ +DE++ +F+ + R L +TI +Y
Sbjct: 148 DSHEEAANAAPLTLKLCQMLEQGGEWEDCVDEVVGQFQMETGRRLTYTICYY 199
>gi|367007725|ref|XP_003688592.1| hypothetical protein TPHA_0O01910 [Tetrapisispora phaffii CBS 4417]
gi|357526901|emb|CCE66158.1| hypothetical protein TPHA_0O01910 [Tetrapisispora phaffii CBS 4417]
Length = 202
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 49/240 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
++LK+ VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 4 TSLKLCTVCASNNNRSMESHKVLQEAGYNVNSYGTG--------SAV------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 43 ------------------RLPGLSIDKPNVYAFGTP-YNDIYNDLLSQSSERYKANGLLS 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML RN+++K PEK+QE+ FDII TCEER +D V+E ++ +N VH+IN+DI+
Sbjct: 84 MLNRNRKLKKFPEKWQENFKVFDIIFTCEERCFDSVIEDLMSRG-GKKNKLVHVINVDIK 142
Query: 183 DNQEEATLGA---FLASELMSMFIKCED----LDNEIDEIMQEFEEK-CSRPLLHTILFY 234
D+ E A +GA ++L++ K ++ L++ I I+ E++ + + P L++ +Y
Sbjct: 143 DDNENAKIGAKSILKLTDLINERYKTQNDENLLEDNIISILTEWQAQYPTLPCLYSPAYY 202
>gi|403216262|emb|CCK70759.1| hypothetical protein KNAG_0F00900 [Kazachstania naganishii CBS
8797]
Length = 209
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 123/245 (50%), Gaps = 54/245 (22%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S+LK VC+SN NRSME+H L + G VKS+GTG S V
Sbjct: 6 SSLKFCTVCASNNNRSMESHKVLQEAGYSVKSYGTG--------SAV------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 45 ------------------RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSADRYKSNGLLG 85
Query: 123 MLERNKRIKLKPEKFQ-ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDI 181
ML+RN+++K PEK+Q S + FD + TCEER +D V E + L N VH+INIDI
Sbjct: 86 MLDRNRKLKKAPEKWQNNSGNVFDFVFTCEERCFDAVCEDLMGRGGHL-NKLVHVINIDI 144
Query: 182 QDNQEEATLGAFLASELMSMFIKCED-----------LDNEIDEIMQEFEEK-CSRPLLH 229
+D+ E A +GA +L M + D ++ I I+ E++++ + P L+
Sbjct: 145 KDDNENAKIGAKAILKLADMLNQSVDECNRDNSSAVPFEDSIIGILTEWQQQFPTLPCLY 204
Query: 230 TILFY 234
+ FY
Sbjct: 205 SPAFY 209
>gi|402580593|gb|EJW74543.1| RNA polymerase II subunit A domain phosphatase SSU72 [Wuchereria
bancrofti]
Length = 131
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 84/156 (53%), Gaps = 39/156 (25%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ AV CSSNMNRSMEAH++L K+G V+SFG+G +
Sbjct: 2 GKLRFAVSCSSNMNRSMEAHSFLQKRGFSVESFGSGSQV--------------------- 40
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G D+PN YDF TY+ IY DL KD YT+NGLL+
Sbjct: 41 ------------------KLPGPTPDRPNCYDFGVATYDFIYNDLKQKDPQLYTQNGLLN 82
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQV 158
ML+RN+RIK P+KFQ KFD+II EERVYDQV
Sbjct: 83 MLDRNRRIKDMPQKFQHFSGKFDVIICLEERVYDQV 118
>gi|238484823|ref|XP_002373650.1| transcription/RNA-processing factor Ssu72 [Aspergillus flavus
NRRL3357]
gi|317140821|ref|XP_001818422.2| RNA polymerase II subunit A C-terminal domain phosphatase ssu72
[Aspergillus oryzae RIB40]
gi|220701700|gb|EED58038.1| transcription/RNA-processing factor Ssu72 [Aspergillus flavus
NRRL3357]
gi|391870614|gb|EIT79794.1| protein involved in transcription start site selection [Aspergillus
oryzae 3.042]
Length = 290
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 122/251 (48%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 56 LRFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTG--------SLV------------- 94
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y++L +KD+ Y NGLL+
Sbjct: 95 ------------------RLPGPSITQPNVYNFNTTSYSQMYEELYSKDERLYRNNGLLN 136
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 137 MLERNRNLKWGPERFQDWVPGMPRVDHVAKGDKGALGTEGGVVDVIITCEERCWDAVVDD 196
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIK------CEDLDNE 211
N+ SL N PVH+ N+DI+DN EEA +G LA+ L ++ E +N
Sbjct: 197 LMNKG-SLLNRPVHVFNVDIKDNHEEALVGGKAILELANRLNEAAVQERKANNSEGWENG 255
Query: 212 IDEIMQEFEEK 222
E + F+EK
Sbjct: 256 TGEARRSFDEK 266
>gi|134076401|emb|CAK48219.1| unnamed protein product [Aspergillus niger]
Length = 251
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 104/196 (53%), Gaps = 48/196 (24%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 32 LRFCTVCASNQNRSMEAHLRLSTATSPFPVISFGTG--------SLV------------- 70
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L++KD+ Y NGLL+
Sbjct: 71 ------------------RLPGPSITQPNVYNFNTTSYSQMYDELLSKDERLYRNNGLLN 112
Query: 123 MLERNKRIKLKPEKFQE------SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHL 176
MLERN+ +K PE+FQ+ D+IITCEER +D V++ N+ L N PVH+
Sbjct: 113 MLERNRNLKWGPERFQDWGALGTEGGVVDVIITCEERCWDAVVDDLMNKGSPL-NRPVHV 171
Query: 177 INIDIQDNQEEATLGA 192
N+DI+DN EEA +G
Sbjct: 172 FNVDIKDNHEEALVGG 187
>gi|345565523|gb|EGX48472.1| hypothetical protein AOL_s00080g101 [Arthrobotrys oligospora ATCC
24927]
Length = 284
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC++N NRSMEAH LS+ G V SFGTG S V
Sbjct: 50 LKFCTVCANNQNRSMEAHLVLSQAGFPVISFGTG--------SAV--------------- 86
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++DKPN+Y F+ T+Y+++Y +L +D Y+ NGLL ML
Sbjct: 87 ----------------RLPGPSIDKPNIYAFNATSYDEMYTELKARDIRLYSANGLLSML 130
Query: 125 ERNKRIKLKPEKFQE---------------------------SKDKFDIIITCEERVYDQ 157
+RN++IK PE++Q+ D++ITCEER +D
Sbjct: 131 DRNRKIKKSPERWQDWNVGLPRVGAGPVEKRGGGEKTYSDEIESGIVDVVITCEERCWDA 190
Query: 158 VLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFI--------KCED-- 207
V++ ++ L N VH+INIDI+DN EEA +G EL M K D
Sbjct: 191 VVDDLISRGSPL-NRLVHVINIDIKDNHEEAAVGGKGILELAKMLTAAAKEEKDKAADEA 249
Query: 208 -------LDNEIDEIMQEFEEK-CSRPLLHTILFY 234
+D + EI+ E++E+ + P+L T ++
Sbjct: 250 RDFDRSSVDGRVPEILAEWQERHPTLPVLWTASYF 284
>gi|124107583|sp|Q2UPU5.1|SSU72_ASPOR RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu72; Short=CTD phosphatase ssu72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|83766277|dbj|BAE56420.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 262
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 122/251 (48%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 28 LRFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTG--------SLV------------- 66
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y++L +KD+ Y NGLL+
Sbjct: 67 ------------------RLPGPSITQPNVYNFNTTSYSQMYEELYSKDERLYRNNGLLN 108
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 109 MLERNRNLKWGPERFQDWVPGMPRVDHVAKGDKGALGTEGGVVDVIITCEERCWDAVVDD 168
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIK------CEDLDNE 211
N+ SL N PVH+ N+DI+DN EEA +G LA+ L ++ E +N
Sbjct: 169 LMNKG-SLLNRPVHVFNVDIKDNHEEALVGGKAILELANRLNEAAVQERKANNSEGWENG 227
Query: 212 IDEIMQEFEEK 222
E + F+EK
Sbjct: 228 TGEARRSFDEK 238
>gi|296419400|ref|XP_002839296.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635424|emb|CAZ83487.1| unnamed protein product [Tuber melanosporum]
Length = 259
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 126/256 (49%), Gaps = 66/256 (25%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS V SFGTG S V
Sbjct: 44 LKFCTVCASNQNRSMEAHLVLSLSQYPVISFGTG--------SAV--------------- 80
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++DKPN+Y F++TTY+++Y L KD Y NGLL ML
Sbjct: 81 ----------------RLPGPSIDKPNIYAFNSTTYDEMYNSLKEKDPRLYHANGLLGML 124
Query: 125 ERNKRIKLKPEKFQESK-----------DKFDIIITCEERVYDQVLEHFDNQMISLENTP 173
+RN+RIK PE++Q+ K D+++TCEER +D V++ N+ L N
Sbjct: 125 DRNRRIKGCPERWQDWKVGVPRKDGVEDGVVDVVVTCEERCWDIVVDDLTNRNSPL-NRL 183
Query: 174 VHLINIDIQDNQEEATLGAFLASELMSMFIKC--------------EDLDNEIDEIMQEF 219
VH+IN+DI+DN EEA +G EL +M + E +D ++ E++ ++
Sbjct: 184 VHIINVDIKDNHEEALVGGKGILELANMLSEAAREEREKAGPNFVRETVDGKVPEVLAKW 243
Query: 220 EEK-CSRPLLHTILFY 234
+E+ P L T+ ++
Sbjct: 244 QERFPGLPALWTVGYF 259
>gi|296198280|ref|XP_002746675.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Callithrix jacchus]
Length = 169
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 97 TTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYD 156
T ++ + K K YT+N +LH+L+RNKR++ +PE+FQ KD FD+I+TC+ERVYD
Sbjct: 34 ATKGSTVFPASVRKTKKLYTQNVILHILDRNKRMEPRPERFQNCKDLFDLILTCQERVYD 93
Query: 157 QVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIM 216
QV+E N PVH++N+DIQD EEATLG FL EL ED +N+I+E++
Sbjct: 94 QVVEDL-NSREQETCQPVHVVNVDIQDKHEEATLGTFLICELCQCIQHTEDTENQINELL 152
Query: 217 QEFEEKCSRPLLHTILFY 234
Q F E+ LHTI FY
Sbjct: 153 Q-FVERSGLTFLHTICFY 169
>gi|170580434|ref|XP_001895263.1| transcription factor associated protein Ssu72 [Brugia malayi]
gi|158597868|gb|EDP35891.1| transcription factor associated protein Ssu72, putative [Brugia
malayi]
Length = 156
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G D+PN YDF TY+ IY DL KD YT+NGLL+ML+RN+RIK P+KFQ
Sbjct: 21 LPGPTPDRPNCYDFGVATYDFIYNDLKQKDPQLYTQNGLLNMLDRNRRIKDMPQKFQHFS 80
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
KFD+II EERVYDQ++E + + E VH+INIDIQDN EEA +GA +L +
Sbjct: 81 GKFDVIICLEERVYDQIVEDLQTRDTN-EGDSVHVINIDIQDNHEEAAIGALFVCDLCA 138
>gi|121710386|ref|XP_001272809.1| transcription/RNA-processing factor Ssu72 [Aspergillus clavatus
NRRL 1]
gi|119400959|gb|EAW11383.1| transcription/RNA-processing factor Ssu72 [Aspergillus clavatus
NRRL 1]
Length = 284
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 116/249 (46%), Gaps = 71/249 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 52 LKFCTVCASNQNRSMEAHLRLSTAPYPVISFGTG--------SLV--------------- 88
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+TT+Y +Y +L +KD+ Y NGLL+ML
Sbjct: 89 ----------------RLPGPTITQPNVYHFNTTSYSQMYDELQSKDERLYRNNGLLNML 132
Query: 125 ERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEHFD 163
+RN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 133 DRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGAVDVIITCEERCWDAVVDDLM 192
Query: 164 NQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIK------CEDLDNEID 213
N+ L N PVH+ N+DI+DN EEA +G LA L + E +N
Sbjct: 193 NKGAVL-NRPVHVFNVDIKDNHEEALVGGKAILDLAGRLNDAATQERKAHGSEGWENGTG 251
Query: 214 EIMQEFEEK 222
E + F+E+
Sbjct: 252 EARRSFDER 260
>gi|297714506|ref|XP_002833686.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like, partial [Pongo
abelii]
Length = 138
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 7/141 (4%)
Query: 97 TTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYD 156
TTY+++Y DL+ KD+ YT NG+LH+L RN+RIK PE+FQE D FD+I TCEE VYD
Sbjct: 2 ATTYKEMYNDLLRKDRERYTHNGILHILGRNERIKPGPERFQECTDFFDVIFTCEESVYD 61
Query: 157 QVLEHFDNQMISLEN---TPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEID 213
V+E + S E PVH+IN+DI+D E+ATLGAFL E+ + +D+D+ ++
Sbjct: 62 TVVE----DLCSREQQTFQPVHVINMDIEDTLEDATLGAFLICEICQCLQQSDDMDDNLE 117
Query: 214 EIMQEFEEKCSRPLLHTILFY 234
E++ EEK + LHT+ FY
Sbjct: 118 ELLLLMEEKAGKSFLHTVCFY 138
>gi|443896847|dbj|GAC74190.1| protein involved in transcription start site selection [Pseudozyma
antarctica T-34]
Length = 221
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 96/186 (51%), Gaps = 41/186 (22%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S++ VVC+SN NRSM AH+ L+K G +V S GTG
Sbjct: 48 SSIMFCVVCASNQNRSMAAHSLLAKSGFNVTSAGTGSA---------------------- 85
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ PN+Y F T Y DI DL +KD Y NGL+
Sbjct: 86 -----------------VRLPGPKINLPNIYPFGTA-YTDIIDDLNSKDPRLYWANGLMT 127
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML RNK +K PE++QE+K DI+ITCEER +D V E N+ L N PVH+IN++I+
Sbjct: 128 MLNRNKDVKRAPERWQETKFTADIVITCEERCFDAVCEDLFNRGGEL-NRPVHVINVEIK 186
Query: 183 DNQEEA 188
DN EEA
Sbjct: 187 DNHEEA 192
>gi|261196954|ref|XP_002624880.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
SLH14081]
gi|239596125|gb|EEQ78706.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
SLH14081]
gi|239609712|gb|EEQ86699.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
ER-3]
gi|327355371|gb|EGE84228.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
ATCC 18188]
Length = 292
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 58 LKFCTVCAANQNRSMEAHNRLSAPPSSYPVISFGTG--------SLV------------- 96
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +LM KD Y NG+L
Sbjct: 97 ------------------RLPGPSITQPNVYNFNTVSYAQIYDELMQKDPRLYRNNGVLP 138
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQE DK D IITCEER +D V++
Sbjct: 139 MLERNKGVKWGPERFQEWIPGMPRLDHVSRGDKGALGTEGGLVDAIITCEERCWDAVVDD 198
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L D
Sbjct: 199 LMNRGAPL-NRPVHVFNVDIRDNHEEALVGSKAILDLADRLNSAADEERKINGTNGWDQG 257
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D+++ EI+ +++EK P L T+ ++
Sbjct: 258 TGEARRSFDDKVPEILAKWQEKWPNLPALWTLSWF 292
>gi|367014017|ref|XP_003681508.1| hypothetical protein TDEL_0E00540 [Torulaspora delbrueckii]
gi|359749169|emb|CCE92297.1| hypothetical protein TDEL_0E00540 [Torulaspora delbrueckii]
Length = 206
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 102/199 (51%), Gaps = 41/199 (20%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+L+ VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 8 DLRFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG--------SAV-------------- 45
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL M
Sbjct: 46 -----------------RLPGLSIDKPNVYAF-GTPYNDIYNDLLSQSADRYKSNGLLQM 87
Query: 124 LERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
L+RN+++K PEK+ E+ FD + TCEER +D V E N+ L N VH+IN+DI+D
Sbjct: 88 LDRNRKLKRAPEKWHENTGTFDFVFTCEERCFDSVCEDLMNRGGML-NKIVHVINVDIRD 146
Query: 184 NQEEATLGAFLASELMSMF 202
+ E A +G +L M
Sbjct: 147 DNENAKIGGKAILQLADML 165
>gi|85115996|ref|XP_964973.1| protein SSU72 [Neurospora crassa OR74A]
gi|74618547|sp|Q7SFY0.1|SSU72_NEUCR RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu-72; Short=CTD phosphatase ssu-72;
AltName: Full=Suppressor of SUA7 protein 2 homolog
gi|28926772|gb|EAA35737.1| protein SSU72 [Neurospora crassa OR74A]
Length = 266
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 105/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME H LS V SFGTG S+V
Sbjct: 36 LKFCTVCASNQNRSMEGHLRLSLANYPVISFGTG--------SLV--------------- 72
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 73 ----------------RLPGPSITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 116
Query: 125 ERNKRIKLKPEKFQESK----------DK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+++K PE++Q+ + DK D++ITCEER +D V+E N+
Sbjct: 117 GRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGVADVVITCEERCWDAVIEDLLNR 176
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+INIDI+DN EEA++G
Sbjct: 177 GSPL-NRPVHVINIDIKDNHEEASVGG 202
>gi|350296554|gb|EGZ77531.1| RNA polymerase II subunit A C-terminal domain phosphatase ssu-72
[Neurospora tetrasperma FGSC 2509]
Length = 266
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 105/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME H LS V SFGTG S+V
Sbjct: 36 LKFCTVCASNQNRSMEGHLRLSLANYPVISFGTG--------SLV--------------- 72
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 73 ----------------RLPGPSITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 116
Query: 125 ERNKRIKLKPEKFQESK----------DKF---------DIIITCEERVYDQVLEHFDNQ 165
RN+++K PE++Q+ + DK D++ITCEER +D V+E N+
Sbjct: 117 GRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGVADVVITCEERCWDAVIEDLLNR 176
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+INIDI+DN EEA++G
Sbjct: 177 GSPL-NRPVHVINIDIKDNHEEASVGG 202
>gi|336464464|gb|EGO52704.1| hypothetical protein NEUTE1DRAFT_91302 [Neurospora tetrasperma FGSC
2508]
Length = 266
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 105/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME H LS V SFGTG S+V
Sbjct: 36 LKFCTVCASNQNRSMEGHLRLSLANYPVISFGTG--------SLV--------------- 72
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 73 ----------------RLPGPSITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 116
Query: 125 ERNKRIKLKPEKFQESK----------DK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+++K PE++Q+ + DK D++ITCEER +D V+E N+
Sbjct: 117 GRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGVADVVITCEERCWDAVIEDLLNR 176
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+INIDI+DN EEA++G
Sbjct: 177 GSPL-NRPVHVINIDIKDNHEEASVGG 202
>gi|320586441|gb|EFW99111.1| transcription RNA-processing factor ssu72 [Grosmannia clavigera
kw1407]
Length = 250
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 104/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L K G V SFGTG S+V
Sbjct: 20 LKFCTVCASNQNRSMEAHLRLGKAGFPVVSFGTG--------SLV--------------- 56
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ +Y++L KD Y NG+L+M+
Sbjct: 57 ----------------RLPGPSITQPNVYQFNKTSYDSMYRELEAKDDRLYRANGVLNMI 100
Query: 125 ERNKRIKLKPEKFQESK-------------------DKFDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ + D++ITCEER +D V++ N+
Sbjct: 101 DRNRGVKWGPERWQDWQIGIPRLEHASDLGSIGTEGGVVDVVITCEERCWDAVIDDLLNR 160
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH++N+DI+DN EEA +G
Sbjct: 161 GSPL-NRPVHVVNVDIRDNHEEAAVGG 186
>gi|242786923|ref|XP_002480900.1| transcription/RNA-processing factor Ssu72 [Talaromyces stipitatus
ATCC 10500]
gi|218721047|gb|EED20466.1| transcription/RNA-processing factor Ssu72 [Talaromyces stipitatus
ATCC 10500]
Length = 290
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 104/209 (49%), Gaps = 61/209 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 57 LKFCTVCASNNNRSMEAHYQLSSGSYPVISFGTG--------SLV--------------- 93
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNV++F +T+Y +Y+DL NKD+ Y NG+L+ML
Sbjct: 94 ----------------RLPGPSITQPNVFNFDSTSYNHMYEDLYNKDQRLYRNNGILNML 137
Query: 125 ERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEHFD 163
+RN+ +K PE+FQ DK D+IITCEER +D V++
Sbjct: 138 DRNRNLKWGPERFQNWVPGQPRLDHIAKGDKGSLGTEAGVVDVIITCEERCWDAVVDDLL 197
Query: 164 NQMISLENTPVHLINIDIQDNQEEATLGA 192
N+ L N PVH+ N+DI+DN EEA LG
Sbjct: 198 NRGSPL-NRPVHVFNVDIRDNHEEALLGG 225
>gi|241958328|ref|XP_002421883.1| RNA polymerase II subunit A C-terminal domain phosphatase,
putative; transcription/RNA-processing factor, putative
[Candida dubliniensis CD36]
gi|223645228|emb|CAX39827.1| RNA polymerase II subunit A C-terminal domain phosphatase, putative
[Candida dubliniensis CD36]
Length = 226
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 110/209 (52%), Gaps = 50/209 (23%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L G DV SFGTG
Sbjct: 8 SLKICTVCASNNNRSMESHKQLMDAGYDVHSFGTG------------------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMN-KDKAFYTRNGLLH 122
+V L G ++DKPNVYDF T Y+ +Y DL++ K + Y NGL+H
Sbjct: 43 ---------TAVRL-----PGPSVDKPNVYDF-GTPYQVMYDDLISQKSRKLYESNGLIH 87
Query: 123 MLERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENTP------- 173
MLERNK +K PEK+ S KFD++ITCEER +D V+E ++M + +
Sbjct: 88 MLERNKSVKEAPEKWHRNASLGKFDLVITCEERCFDSVIEDLMHRMYDRDPSDNDDIKRL 147
Query: 174 VHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+INIDI+D+ E A +G +L++M
Sbjct: 148 VHVINIDIKDDNENAIMGGKGILKLVNMI 176
>gi|156845938|ref|XP_001645858.1| hypothetical protein Kpol_1054p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156116527|gb|EDO18000.1| hypothetical protein Kpol_1054p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 202
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 100/190 (52%), Gaps = 41/190 (21%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 4 SQLTFCTVCASNNNRSMESHKVLQEAGYNVNSYGTG--------SAV------------- 42
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL
Sbjct: 43 ------------------RLPGLSIDKPNVYPF-GTPYNDIYNDLLSQSADRYKSNGLLQ 83
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK PEK+ E+ FDII TCEER +D V+E ++ +N VH+INIDI+
Sbjct: 84 MLDRNRRIKKSPEKWHENFKIFDIIFTCEERCFDSVIEDLMSRG-GKQNKLVHVINIDIK 142
Query: 183 DNQEEATLGA 192
D+ E A G+
Sbjct: 143 DDNENAKTGS 152
>gi|145354748|ref|XP_001421639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581877|gb|ABO99932.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 199
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 46/234 (19%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ AVVC++N NRSMEAH L+++G+DV SFG +
Sbjct: 7 RYAVVCAANFNRSMEAHKVLAERGLDVASFGAASR------------------------- 41
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF---YTRNGLLH 122
+ G + D PNVYDF + TYEDI DL + + Y G+
Sbjct: 42 --------------VKLPGASRDDPNVYDFDSITYEDIASDLERQPRETVENYEARGMFE 87
Query: 123 MLERNKRIKLKPEKFQ--ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
ML RN +IK P+++Q +++FD+++ EERV+D V+E + + E V ++N+D
Sbjct: 88 MLRRNAKIKPAPQRWQTHSDRERFDVVVCFEERVFDLVMEDLRAKGGAREG--VLVVNLD 145
Query: 181 IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
++D+ + + A A L ED ++E+DEIM FEE L+ + +Y
Sbjct: 146 VRDSHDSSVDAAPRALRLCEALEASEDWESEVDEIMNAFEEAEGMRPLYGVCYY 199
>gi|70989317|ref|XP_749508.1| transcription/RNA-processing factor Ssu72 [Aspergillus fumigatus
Af293]
gi|74669140|sp|Q4WHY5.1|SSU72_ASPFU RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu72; Short=CTD phosphatase ssu72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|66847139|gb|EAL87470.1| transcription/RNA-processing factor Ssu72 [Aspergillus fumigatus
Af293]
gi|159128919|gb|EDP54033.1| transcription/RNA-processing factor Ssu72 [Aspergillus fumigatus
A1163]
Length = 287
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 118/251 (47%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 53 LKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTG--------SLV------------- 91
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L+ KD+ Y NGLL+
Sbjct: 92 ------------------RLPGPSITQPNVYNFNTTSYSQMYDELLAKDERLYRNNGLLN 133
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 134 MLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGTVDVIITCEERCWDAVVDD 193
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFI----------KCEDLDNE 211
N+ +L N PVH+ N+DI+DN EEA +G EL + E +N
Sbjct: 194 LMNKGAAL-NRPVHVFNVDIRDNHEEALVGGKAILELATRLNDAATQERKIHGAEGWENG 252
Query: 212 IDEIMQEFEEK 222
E + F+E+
Sbjct: 253 NGEARRSFDER 263
>gi|119479963|ref|XP_001260010.1| transcription/RNA-processing factor Ssu72 [Neosartorya fischeri
NRRL 181]
gi|119408164|gb|EAW18113.1| transcription/RNA-processing factor Ssu72 [Neosartorya fischeri
NRRL 181]
Length = 287
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 118/251 (47%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 53 LKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTG--------SLV------------- 91
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L+ KD+ Y NGLL+
Sbjct: 92 ------------------RLPGPSITQPNVYNFNTTSYSQMYDELLAKDERLYRNNGLLN 133
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 134 MLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGTVDVIITCEERCWDAVVDD 193
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFI----------KCEDLDNE 211
N+ +L N PVH+ N+DI+DN EEA +G EL + E +N
Sbjct: 194 LMNKGAAL-NRPVHVFNVDIRDNHEEALVGGKAILELATRLNDAANQERKIHGAEGWENG 252
Query: 212 IDEIMQEFEEK 222
E + F+E+
Sbjct: 253 NGEARRSFDER 263
>gi|344304093|gb|EGW34342.1| end formation complex subunit [Spathaspora passalidarum NRRL
Y-27907]
Length = 221
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 50/212 (23%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+ +LK+ VC+SN NRSMEAH L G DVKSFGTG S V
Sbjct: 2 LEDSLKICTVCASNNNRSMEAHKQLQDAGFDVKSFGTG--------SAV----------- 42
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMN-KDKAFYTRNG 119
+ G ++DKPNVYDF T Y+ IY DLM+ K + Y G
Sbjct: 43 --------------------RLPGPSIDKPNVYDF-GTPYQVIYDDLMSQKCRKMYESTG 81
Query: 120 LLHMLERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHFDNQMISLENTP---- 173
L+HML+RN+++K PEK+ + KFD++ITCEER +D VL+ +M + ++
Sbjct: 82 LIHMLDRNRQVKTAPEKWHSNSYAGKFDLVITCEERCFDSVLDDLMYRMYANDDDDANDV 141
Query: 174 ---VHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+IN+DI+D+ E A +G +L++M
Sbjct: 142 KKIVHVINVDIKDDNENAIIGGRGILKLVNMI 173
>gi|336267164|ref|XP_003348348.1| hypothetical protein SMAC_02845 [Sordaria macrospora k-hell]
gi|380092000|emb|CCC10268.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 266
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 105/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME H LS V SFGTG S+V
Sbjct: 36 LKFCTVCASNQNRSMEGHLRLSLANYPVISFGTG--------SLV--------------- 72
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 73 ----------------RLPGPSITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 116
Query: 125 ERNKRIKLKPEKFQESK----------DK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+++K PE++Q+ + DK D++ITCEER +D V++ N+
Sbjct: 117 GRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGVADVVITCEERCWDAVIDDLLNR 176
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+INIDI+DN EEA++G
Sbjct: 177 GSPL-NRPVHVINIDIKDNHEEASVGG 202
>gi|225562672|gb|EEH10951.1| transcription/RNA-processing factor Ssu72 [Ajellomyces capsulatus
G186AR]
Length = 292
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 58 LKFCTVCAANQNRSMEAHNRLSAPPSSYPVISFGTG--------SLV------------- 96
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y +Y +L+ KD Y NG+L
Sbjct: 97 ------------------RLPGPSIAQPNVYNFNTVSYAQMYDELLQKDPRLYRNNGVLP 138
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQE DK D IITCEER +D V++
Sbjct: 139 MLERNKSVKWGPERFQEWVPGMPRLDHVSRGDKGALGTEGGLVDAIITCEERCWDAVVDD 198
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L D
Sbjct: 199 LMNRGAPL-NRPVHVFNVDIRDNHEEALVGSKAILDLADRLNSAADQERRINGTNGWDQG 257
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D+++ EI+ +++EK P L T+ ++
Sbjct: 258 TGEARRCFDDQVPEILAKWQEKWPNLPALWTLSWF 292
>gi|154279658|ref|XP_001540642.1| hypothetical protein HCAG_04482 [Ajellomyces capsulatus NAm1]
gi|150412585|gb|EDN07972.1| hypothetical protein HCAG_04482 [Ajellomyces capsulatus NAm1]
gi|240279478|gb|EER42983.1| transcription/RNA-processing factor Ssu72 [Ajellomyces capsulatus
H143]
gi|325092608|gb|EGC45918.1| transcription/RNA-processing factor Ssu72 [Ajellomyces capsulatus
H88]
Length = 292
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 58 LKFCTVCAANQNRSMEAHNRLSAPPSSYPVISFGTG--------SLV------------- 96
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y +Y +L+ KD Y NG+L
Sbjct: 97 ------------------RLPGPSIAQPNVYNFNTVSYAQMYDELLQKDPRLYRNNGVLP 138
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQE DK D IITCEER +D V++
Sbjct: 139 MLERNKSVKWGPERFQEWVPGMPRLDHVSRGDKGALGTEGGLVDAIITCEERCWDAVVDD 198
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L D
Sbjct: 199 LMNRGAPL-NRPVHVFNVDIRDNHEEALVGSKAILDLADRLNSAADQERRINGTNGWDQG 257
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D+++ EI+ +++EK P L T+ ++
Sbjct: 258 TGEARKCFDDQVPEILAKWQEKWPNLPALWTLSWF 292
>gi|358368849|dbj|GAA85465.1| transcription/RNA-processing factor Ssu72 [Aspergillus kawachii IFO
4308]
Length = 299
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 126/274 (45%), Gaps = 85/274 (31%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 65 LRFCTVCASNQNRSMEAHLRLSTASSPFPVISFGTG--------SLV------------- 103
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L++KD+ Y NGLL+
Sbjct: 104 ------------------RLPGPSITQPNVYNFNTTSYSQMYDELLSKDERLYRNNGLLN 145
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 146 MLERNRNLKWGPERFQDWVPGQPRVEHVSKGDKGALGTEGGVVDVIITCEERCWDAVVDD 205
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKC---------------- 205
N+ L N PVH+ N+DI+DN EEA +G +L + +
Sbjct: 206 LMNKGSPL-NRPVHVFNVDIKDNHEEALVGGKAILDLANRLNEAASQERKASGADGWENG 264
Query: 206 -----EDLDNEIDEIMQEFEEKCSR-PLLHTILF 233
+ D + +I+ E++EK P L T+ +
Sbjct: 265 VGEARRNFDARVPDILAEWQEKWPHLPALWTLAW 298
>gi|260949673|ref|XP_002619133.1| hypothetical protein CLUG_00292 [Clavispora lusitaniae ATCC 42720]
gi|238846705|gb|EEQ36169.1| hypothetical protein CLUG_00292 [Clavispora lusitaniae ATCC 42720]
Length = 225
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 109/210 (51%), Gaps = 51/210 (24%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LKV VC+SN NRSME+H L G DV SFGTG
Sbjct: 5 SLKVCTVCASNNNRSMESHKQLKDAGFDVSSFGTGS------------------------ 40
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLLH 122
SV L G ++D+PN+Y+F T YE IYQDL++++ + Y NGL+
Sbjct: 41 ----------SVKL-----PGPSIDRPNIYEF-GTPYETIYQDLLSQEYRKMYEANGLIS 84
Query: 123 MLERNKRIKLKPEKFQESKD--KFDIIITCEERVYDQVLEHFDNQMISLENTP------- 173
ML+RN+ +K PEK+ + + KFD++ITCEER +D V+E N+M +
Sbjct: 85 MLDRNRHVKKAPEKWHNNANAGKFDLVITCEERCFDSVVEDLMNRMNNKSEDAEEKDVRK 144
Query: 174 -VHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+INIDI+D+ E A +G L+ M
Sbjct: 145 VVHIINIDIKDDNENAKIGGKGIVRLVKMI 174
>gi|351697237|gb|EHB00156.1| hypothetical protein GW7_01941 [Heterocephalus glaber]
Length = 151
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 102/216 (47%), Gaps = 65/216 (30%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
MEAH LSK+G V+SFGTG
Sbjct: 1 MEAHNILSKRGFRVQSFGTGTHV------------------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G A DKPNVYDF TTY+ I NKR K +PE+FQ
Sbjct: 24 --KLPGPAPDKPNVYDF-KTTYDQI-----------------------NKRTKPQPERFQ 57
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
KD D+I+TCEERV+DQV+E N PVH++N+DIQDN EE TLG FL EL
Sbjct: 58 NCKDLLDLILTCEERVFDQVVEDL-NSREQETCQPVHVVNVDIQDNHEETTLGVFLICEL 116
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E ++ EIDE+++E EK R LHT+ FY
Sbjct: 117 CQCIQHTEYMEKEIDELLREC-EKNGRAFLHTVCFY 151
>gi|296810940|ref|XP_002845808.1| transcription/RNA-processing factor Ssu72 [Arthroderma otae CBS
113480]
gi|238843196|gb|EEQ32858.1| transcription/RNA-processing factor Ssu72 [Arthroderma otae CBS
113480]
Length = 293
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 59 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 97
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 98 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 139
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 140 MLERNKGVKWGPERFQDWNPGMPRLDHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 199
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + + D
Sbjct: 200 LMNRGAPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADEERRLNGPNGWDQG 258
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 259 AGDARRGFDERVPEILAKWQEKWPNLPALWTLSWF 293
>gi|326473182|gb|EGD97191.1| transcription/RNA-processing factor Ssu72 [Trichophyton tonsurans
CBS 112818]
Length = 288
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 93 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 135 MLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + + D
Sbjct: 195 LMNRGSPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADEERRLNGPNGWDQG 253
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 254 TGDARRGFDERVPEILAKWQEKWPNLPALWTLSWF 288
>gi|302667169|ref|XP_003025175.1| hypothetical protein TRV_00657 [Trichophyton verrucosum HKI 0517]
gi|291189265|gb|EFE44564.1| hypothetical protein TRV_00657 [Trichophyton verrucosum HKI 0517]
Length = 288
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 93 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 135 MLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + + D
Sbjct: 195 LMNRGSPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADEERRLNGPNGWDQG 253
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 254 TGDARRGFDERVPEILAKWQEKWPNLPALWTLSWF 288
>gi|255943147|ref|XP_002562342.1| Pc18g05150 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587075|emb|CAP94739.1| Pc18g05150 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 288
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 118/251 (47%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKK--GVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCASNNNRSMEAHLQLSGAPTAFPVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY F+TT+Y +Y++L KD+ Y NG+L+
Sbjct: 93 ------------------RLPGPSITQPNVYSFNTTSYNQMYEELSGKDERLYRSNGILN 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+++K PE+FQ+ DK DIIITCEER +D V++
Sbjct: 135 MLDRNRQLKWGPERFQDWVPGVPRVDHLSKGDKGAVGTEGGVVDIIITCEERCWDAVVDD 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFI------KCEDLDNE 211
N+ +L N PVH+ N+DI+DN EEA G LA+ L + E +N
Sbjct: 195 LMNKGTAL-NYPVHVFNVDIKDNHEEALTGGKAILDLANRLNEAAVAEHRIHGSEGWENG 253
Query: 212 IDEIMQEFEEK 222
Q F+EK
Sbjct: 254 TGPARQSFDEK 264
>gi|327296353|ref|XP_003232871.1| transcription/RNA-processing factor Ssu72 [Trichophyton rubrum CBS
118892]
gi|326465182|gb|EGD90635.1| transcription/RNA-processing factor Ssu72 [Trichophyton rubrum CBS
118892]
Length = 288
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 125/275 (45%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 93 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 135 MLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIKCEDL--------- 208
N+ L N PVH+ N+DI+DN EEA +G+ LA+ L + K L
Sbjct: 195 LMNRGSPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADKERRLNGPNGWDQG 253
Query: 209 --------DNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 254 TGDARRGFDERVPEILAKWQEKWPNLPALWTLSWF 288
>gi|302502979|ref|XP_003013450.1| hypothetical protein ARB_00268 [Arthroderma benhamiae CBS 112371]
gi|291177014|gb|EFE32810.1| hypothetical protein ARB_00268 [Arthroderma benhamiae CBS 112371]
Length = 288
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 93 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 135 MLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + + D
Sbjct: 195 LMNRGSPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADEERRLNGPNGWDQG 253
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 254 TGDARRGFDERVPEILAKWQEKWPNLPALWTLSWF 288
>gi|315051736|ref|XP_003175242.1| RNA polymerase II subunit A domain phosphatase SSU72 [Arthroderma
gypseum CBS 118893]
gi|311340557|gb|EFQ99759.1| RNA polymerase II subunit A domain phosphatase SSU72 [Arthroderma
gypseum CBS 118893]
Length = 288
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 93 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 135 MLERNKGVKWGPERFQDWSPGMPRLEHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + + D
Sbjct: 195 LMNRGSPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADEERRLKGPNGWDQG 253
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 254 TGDARRGFDERVPEILGKWQEKWPNLPALWTLSWF 288
>gi|326477647|gb|EGE01657.1| RNA polymerase II subunit A domain phosphatase SSU72 [Trichophyton
equinum CBS 127.97]
Length = 288
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 54 LKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTG--------SLV------------- 92
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y IY +L KD Y NG+L
Sbjct: 93 ------------------RLPGPSITQPNVYNFNTVSYSQIYDELQAKDPRLYRNNGVLP 134
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQ+ DK D+IITCEER +D V+E
Sbjct: 135 MLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGTEGGVVDVIITCEERCWDAVVED 194
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + + D
Sbjct: 195 LMNRGSPL-NRPVHVFNVDIRDNHEEALVGSKGILDLANRLNEVADEERRLNGPNGWDQG 253
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ +++EK P L T+ ++
Sbjct: 254 TGDARRGFDERVPEILAKWQEKWPNLPALWTLSWF 288
>gi|367043744|ref|XP_003652252.1| hypothetical protein THITE_2113524 [Thielavia terrestris NRRL 8126]
gi|346999514|gb|AEO65916.1| hypothetical protein THITE_2113524 [Thielavia terrestris NRRL 8126]
Length = 257
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 122/271 (45%), Gaps = 81/271 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME H L++ V SFGTG S+V
Sbjct: 27 LKFCTVCASNQNRSMEGHLRLAQANYPVISFGTG--------SLV--------------- 63
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 64 ----------------RLPGPTQTQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 107
Query: 125 ERNKRIKLKPEKFQE----------SKDKF---------DIIITCEERVYDQVLEHFDNQ 165
RN+ IK PE++Q+ KD+ D++ITCEER +D V++ N+
Sbjct: 108 GRNRLIKWGPERWQDWQVGMPRIKNEKDQGSAGLEGGVPDVVITCEERCWDAVVDDLLNR 167
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKC-------------------- 205
L N PVH+INIDI+DN ++A++G +L K
Sbjct: 168 GSPL-NRPVHVINIDIKDNHQDASIGGGAIVDLADALNKAAVEEREKVGASGFDAGSAAS 226
Query: 206 -EDLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + E++ E++E+ + P T+ ++
Sbjct: 227 RASFDERVPEVLAEWQERWPKLPSTWTLSWF 257
>gi|255089158|ref|XP_002506501.1| predicted protein [Micromonas sp. RCC299]
gi|226521773|gb|ACO67759.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 40/211 (18%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
+ A+VC++NMNRSMEAH G+DVKS+G G++
Sbjct: 6 RFAMVCAANMNRSMEAHKVALNAGLDVKSYGAGNR------------------------- 40
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
+ G + D PNV++F + TY+DIY LM +D+ YTRNGL MLE
Sbjct: 41 --------------VKLPGASRDNPNVFEFGSVTYKDIYDKLMAEDEKLYTRNGLKDMLE 86
Query: 126 RNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQ 185
RN IK P+++Q+S+ D+++ EERV+D V+ + + P+ +IN+D+ D+
Sbjct: 87 RNMTIKPAPQRWQDSEVDVDVVVCFEERVFDNVVSDLKGR-VGGSGEPLLVINLDVIDSH 145
Query: 186 EEATLGAFLASELMSMFIKCEDLDNEIDEIM 216
EEA A +L M +D + E DEIM
Sbjct: 146 EEALNAGPHALKLCEMIDASDDWECECDEIM 176
>gi|317029579|ref|XP_001391912.2| RNA polymerase II subunit A C-terminal domain phosphatase ssu72
[Aspergillus niger CBS 513.88]
Length = 294
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 126/274 (45%), Gaps = 85/274 (31%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 60 LRFCTVCASNQNRSMEAHLRLSTATSPFPVISFGTG--------SLV------------- 98
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L++KD+ Y NGLL+
Sbjct: 99 ------------------RLPGPSITQPNVYNFNTTSYSQMYDELLSKDERLYRNNGLLN 140
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 141 MLERNRNLKWGPERFQDWVPGQPRVEHVSKGDKGALGTEGGVVDVIITCEERCWDAVVDD 200
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKC---------------- 205
N+ L N PVH+ N+DI+DN EEA +G +L + +
Sbjct: 201 LMNKGSPL-NRPVHVFNVDIKDNHEEALVGGKAILDLANRLNEAASQERKTNGADGWENG 259
Query: 206 -----EDLDNEIDEIMQEFEEKCSR-PLLHTILF 233
+ D + +I+ E++E+ P L T+ +
Sbjct: 260 VGEARRNFDARVPDILAEWQERWPHLPALWTLAW 293
>gi|410075555|ref|XP_003955360.1| hypothetical protein KAFR_0A07910 [Kazachstania africana CBS 2517]
gi|372461942|emb|CCF56225.1| hypothetical protein KAFR_0A07910 [Kazachstania africana CBS 2517]
Length = 206
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 123/241 (51%), Gaps = 51/241 (21%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+L+ VC+SN NRSME+H L + G +V S+GTG S V
Sbjct: 7 SLEFCTVCASNNNRSMESHRVLQEAGYNVSSYGTG--------SAV-------------- 44
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL M
Sbjct: 45 -----------------RLPGLSIDKPNVYPF-GTPYNDIYNDLLSQSADRYKANGLLQM 86
Query: 124 LERNKRIKLKPEKFQESKDK-FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
L+RN++IK PEK+ E+ K FD + TCEER +D V E N+ +L N VH+INIDI+
Sbjct: 87 LDRNRKIKKFPEKWHENGSKVFDFVFTCEERCFDSVCEDLMNRGGTL-NKIVHVINIDIK 145
Query: 183 DNQEEATLGA----FLASELMSMFIKCE----DLDNEIDEIMQEFEEKCSR-PLLHTILF 233
D+ E A G+ +A L +CE ++ I +I+ E+++ P L++ +
Sbjct: 146 DDNENAKTGSKAILKMADMLSDKIDQCELNGVPFEDCIMDILTEWQQSYPNLPCLYSPAY 205
Query: 234 Y 234
Y
Sbjct: 206 Y 206
>gi|116180454|ref|XP_001220076.1| hypothetical protein CHGG_00855 [Chaetomium globosum CBS 148.51]
gi|126352771|sp|Q2HFZ9.1|SSU72_CHAGB RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|88185152|gb|EAQ92620.1| hypothetical protein CHGG_00855 [Chaetomium globosum CBS 148.51]
Length = 257
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 125/271 (46%), Gaps = 81/271 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME H L++ V SFGTG S+V
Sbjct: 27 LKFCTVCASNQNRSMEGHLRLAQANYPVISFGTG--------SLV--------------- 63
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 64 ----------------RLPGPTITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 107
Query: 125 ERNKRIKLKPEKFQE----------SKDKF---------DIIITCEERVYDQVLEHFDNQ 165
RN+ IK PE++Q+ KD+ DI+ITCEER +D V++ N+
Sbjct: 108 GRNRVIKWGPERWQDWQVGMPRVKHEKDQGSIGMEAGVPDIVITCEERCWDAVVDDLLNR 167
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIKCED-------------- 207
L N PVH+INIDI+DN ++A++G LA L ++ D
Sbjct: 168 GSPL-NRPVHVINIDIKDNHQDASIGGGAMVDLADSLNRAAMEERDKVGAAVFDAGGAAS 226
Query: 208 ---LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + E++ E++E+ P T+ ++
Sbjct: 227 RASFDERVPEVLGEWQERWPGLPSTWTLSWF 257
>gi|350635877|gb|EHA24238.1| hypothetical protein ASPNIDRAFT_181340 [Aspergillus niger ATCC
1015]
Length = 266
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 126/274 (45%), Gaps = 85/274 (31%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 32 LRFCTVCASNQNRSMEAHLRLSTATSPFPVISFGTG--------SLV------------- 70
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L++KD+ Y NGLL+
Sbjct: 71 ------------------RLPGPSITQPNVYNFNTTSYSQMYDELLSKDERLYRNNGLLN 112
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 113 MLERNRNLKWGPERFQDWVPGQPRVEHVSKGDKGALGTEGGVVDVIITCEERCWDAVVDD 172
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKC---------------- 205
N+ L N PVH+ N+DI+DN EEA +G +L + +
Sbjct: 173 LMNKGSPL-NRPVHVFNVDIKDNHEEALVGGKAILDLANRLNEAASQERKTNGADGWENG 231
Query: 206 -----EDLDNEIDEIMQEFEEKCSR-PLLHTILF 233
+ D + +I+ E++E+ P L T+ +
Sbjct: 232 VGEARRNFDARVPDILAEWQERWPHLPALWTLAW 265
>gi|389747389|gb|EIM88568.1| Ssu72-like protein [Stereum hirsutum FP-91666 SS1]
Length = 175
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 41/216 (18%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME H L++ G +V S+GTG S V
Sbjct: 1 MEGHFVLARAGYNVVSYGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++DKPN+Y F T Y DI+++L KD Y+ NG+L M++RN+R+KL PE++Q
Sbjct: 24 --RLPGPSIDKPNIYSF-GTPYNDIFEELNAKDPRLYSANGVLQMIDRNRRVKLAPERWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
E K DI+ITCEER +D V + ++ N PVH+IN++I+DN EEA + +L
Sbjct: 81 ECKTVADIVITCEERCFDAVCDDLMSRGGEF-NRPVHIINVEIKDNHEEALIAGKAMLDL 139
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +D+D +ID+I+Q +EK LLH I +Y
Sbjct: 140 AAAIEASDDIDEDIDKILQAQQEKHPHSLLHAIAYY 175
>gi|294654610|ref|XP_456672.2| DEHA2A07854p [Debaryomyces hansenii CBS767]
gi|218511842|sp|Q6BYP7.2|SSU72_DEBHA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|199429012|emb|CAG84628.2| DEHA2A07854p [Debaryomyces hansenii CBS767]
Length = 223
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 129/262 (49%), Gaps = 74/262 (28%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC++N NRSME+H L G +V+SFGTG S V
Sbjct: 5 SLKICTVCAANNNRSMESHKQLKDAGYNVRSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLLH 122
+ G ++DKPNVY+F T Y+DIY+DL +++ Y NGL+
Sbjct: 43 -----------------RLPGPSVDKPNVYEF-GTPYDDIYRDLTSQEYHKMYESNGLIR 84
Query: 123 MLERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFDNQMISLENT-------- 172
M+ RN+ IK PEK+ S KFD++ITCEER +D VL D+ M+ L N
Sbjct: 85 MINRNRHIKRAPEKWHNNASAGKFDLVITCEERCFDLVL---DDLMVRLVNKDQADTEIK 141
Query: 173 -PVHLINIDIQDNQEEATLGAFLASELMSMFIKCE----------DLDNEIDEIMQE--- 218
VH+INIDI+D+ E A +G +L++M + D D+E D I+++
Sbjct: 142 QAVHIINIDIKDDYENAVIGGKGILKLVNMIHEFRNTNKQRRLDHDFDDESDTILEDQMM 201
Query: 219 ------FEEKCSRPLLHTILFY 234
+E P L+++ +Y
Sbjct: 202 KLLAKWQQEHTHLPTLYSVAYY 223
>gi|451850776|gb|EMD64077.1| hypothetical protein COCSADRAFT_142185 [Cochliobolus sativus
ND90Pr]
Length = 287
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ + SFGTG S+V
Sbjct: 57 LKFCTVCASNQNRSMEAHLQLASAHLPTISFGTG--------SLV--------------- 93
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F++TTY I+ +L ++ A YT NGLL+ML
Sbjct: 94 ----------------RLPGPTITQPNVYHFNSTTYRAIHDELAEQNAALYTNNGLLNML 137
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN IK PE+FQ+ ++DK D++ITCEER +D VLE N+
Sbjct: 138 GRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTEAGVVDVVITCEERCFDAVLEDLHNK 197
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+ N+DI+DN EEA +G
Sbjct: 198 GGKL-NRPVHVFNVDIKDNHEEALVGG 223
>gi|425769346|gb|EKV07841.1| hypothetical protein PDIP_71210 [Penicillium digitatum Pd1]
Length = 289
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 117/251 (46%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGV--DVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 55 LKFCTVCASNNNRSMEAHLQLSGAPAAFPVISFGTG--------SLV------------- 93
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY F+TT+Y +Y++L KD+ Y NG+L+
Sbjct: 94 ------------------RLPGPSITQPNVYSFNTTSYNQMYEELAGKDERLYRGNGILN 135
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+++K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 136 MLDRNRQLKWGPERFQDWVPGVPRVDHLSKGDKGAVGTEGGVVDVIITCEERCWDAVVDD 195
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFI------KCEDLDNE 211
N+ SL N PVH+ N+DI+DN EEA G LA+ L + + N
Sbjct: 196 LMNKGTSL-NYPVHVFNVDIKDNHEEALTGGKAILDLANRLNEAAVAEHRVHGSDGWANG 254
Query: 212 IDEIMQEFEEK 222
Q F+EK
Sbjct: 255 TGPARQSFDEK 265
>gi|425771118|gb|EKV09572.1| hypothetical protein PDIG_61820 [Penicillium digitatum PHI26]
Length = 289
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 117/251 (46%), Gaps = 73/251 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGV--DVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 55 LKFCTVCASNNNRSMEAHLQLSGAPAAFPVISFGTG--------SLV------------- 93
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY F+TT+Y +Y++L KD+ Y NG+L+
Sbjct: 94 ------------------RLPGPSITQPNVYSFNTTSYNQMYEELAGKDERLYRGNGILN 135
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+++K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 136 MLDRNRQLKWGPERFQDWVPGVPRVDHLSKGDKGAVGTEGGVVDVIITCEERCWDAVVDD 195
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFI------KCEDLDNE 211
N+ SL N PVH+ N+DI+DN EEA G LA+ L + + N
Sbjct: 196 LMNKGTSL-NYPVHVFNVDIKDNHEEALTGGKAILDLANRLNEAAVAEHRVHGSDGWANG 254
Query: 212 IDEIMQEFEEK 222
Q F+EK
Sbjct: 255 TGPARQSFDEK 265
>gi|154321293|ref|XP_001559962.1| hypothetical protein BC1G_01521 [Botryotinia fuckeliana B05.10]
gi|347830901|emb|CCD46598.1| similar to transcription/RNA-processing factor Ssu72 [Botryotinia
fuckeliana]
Length = 260
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 127/270 (47%), Gaps = 80/270 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME+H L+ V SFGTG S+V
Sbjct: 31 LKFCTVCASNNNRSMESHLRLAAAHYPVISFGTG--------SLV--------------- 67
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ +Y++L +KD Y NG+L+ML
Sbjct: 68 ----------------RLPGPSITQPNVYQFNKTSYDSMYKELESKDPRLYRANGILNML 111
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ S D+ DI+ITCEER +D V++ N+
Sbjct: 112 GRNRSVKWGPERWQDWQVGVPRLQHSTDQGADGVEGGVVDIVITCEERCWDAVVDDLLNR 171
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIKCEDL------------- 208
L N PVH+IN+DI+DN EEA +G LA L + +L
Sbjct: 172 GSPL-NRPVHVINVDIKDNHEEALVGGRGILDLADSLNKAAAEERELNPAGFDSGSAHSR 230
Query: 209 ---DNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ E++E+ P + T+ ++
Sbjct: 231 AGFDERVPEIIGEWQERWPNLPAVWTLAWF 260
>gi|451995972|gb|EMD88439.1| hypothetical protein COCHEDRAFT_1022845 [Cochliobolus
heterostrophus C5]
Length = 290
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ + SFGTG S+V
Sbjct: 60 LKFCTVCASNQNRSMEAHLQLASAHLPTISFGTG--------SLV--------------- 96
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F++TTY I+ +L ++ A YT NGLL+ML
Sbjct: 97 ----------------RLPGPTITQPNVYHFNSTTYRAIHDELAEQNAALYTNNGLLNML 140
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN IK PE+FQ+ ++DK D++ITCEER +D VLE N+
Sbjct: 141 GRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTEAGVVDVVITCEERCFDAVLEDLHNK 200
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+ N+DI+DN EEA +G
Sbjct: 201 GGKL-NRPVHVFNVDIKDNHEEALVGG 226
>gi|226287269|gb|EEH42782.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Paracoccidioides brasiliensis Pb18]
Length = 292
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 122/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSK--KGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 58 LKFCTVCAANQNRSMEAHNRLSSPPSSYPVISFGTG--------SLV------------- 96
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y +Y +L+ KD Y NG+L
Sbjct: 97 ------------------RLPGPSITQPNVYNFNTVSYAQMYDELLQKDPRLYRNNGVLT 138
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQE DK D IITCEER +D V+E
Sbjct: 139 MLERNKNVKWGPERFQEWVPGMPRLDHVSRGDKGSLGTEGGLVDAIITCEERCWDAVVED 198
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+D+ EEA +G+ +L D
Sbjct: 199 LMNRGAPL-NRPVHVFNVDIRDSHEEALVGSKAILDLADRLNSAADEEQKINGANGWDQA 257
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D ++ EI+ +++EK P L T+ ++
Sbjct: 258 TGEARRCFDEKVPEILAKWQEKWPNLPALWTLSWF 292
>gi|396460110|ref|XP_003834667.1| similar to transcription/RNA-processing factor Ssu72 [Leptosphaeria
maculans JN3]
gi|312211217|emb|CBX91302.1| similar to transcription/RNA-processing factor Ssu72 [Leptosphaeria
maculans JN3]
Length = 286
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ + SFGTG S+V
Sbjct: 56 LKFCTVCASNQNRSMEAHLQLASAHLPTISFGTG--------SLV--------------- 92
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F++TTY I+ +L ++ A YT NGLL+ML
Sbjct: 93 ----------------RLPGPTITQPNVYHFNSTTYRAIHDELAQQNTALYTHNGLLNML 136
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN IK PE+FQ+ ++DK D++ITCEER +D VLE N+
Sbjct: 137 GRNLNIKRFPERFQDWVPGKPRLEHAEDKGSQGTEAGVVDVVITCEERCFDAVLEDLHNK 196
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+ N+DI+DN EEA +G
Sbjct: 197 GGKL-NRPVHVFNVDIKDNHEEALVGG 222
>gi|340517189|gb|EGR47434.1| predicted protein [Trichoderma reesei QM6a]
Length = 253
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 23 LRFCTVCASNQNRSMEAHLRLSQANYPVISFGTG--------SLV--------------- 59
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ +Y++L KD Y NG+L+ML
Sbjct: 60 ----------------RLPGPTITQPNVYQFNKTSYDSMYKELEAKDPRLYRNNGILNML 103
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ S DK D++ TCEER +D V++ N+
Sbjct: 104 GRNRGVKWGPERWQDWPVGVPRLQHSSDKGSEGTEGGIVDVVFTCEERCWDAVIDDLLNR 163
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN+DI+DN EEA +G
Sbjct: 164 GSPL-NRPVHVINVDIKDNHEEAHIGG 189
>gi|225677982|gb|EEH16266.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Paracoccidioides brasiliensis Pb03]
Length = 282
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 122/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSK--KGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 48 LKFCTVCAANQNRSMEAHNRLSSPPSSYPVISFGTG--------SLV------------- 86
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y +Y +L+ KD Y NG+L
Sbjct: 87 ------------------RLPGPSITQPNVYNFNTVSYAQMYDELLQKDPRLYRNNGVLT 128
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQE DK D IITCEER +D V+E
Sbjct: 129 MLERNKNVKWGPERFQEWVPGMPRLDHVSRGDKGSLGTEGGLVDAIITCEERCWDAVVED 188
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+D+ EEA +G+ +L D
Sbjct: 189 LMNRGAPL-NRPVHVFNVDIRDSHEEALVGSKAILDLADRLNSAADEEQKINGANGWDQA 247
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D ++ EI+ +++EK P L T+ ++
Sbjct: 248 TGEARRCFDEKVPEILAKWQEKWPNLPALWTLSWF 282
>gi|212543525|ref|XP_002151917.1| transcription/RNA-processing factor Ssu72 [Talaromyces marneffei
ATCC 18224]
gi|210066824|gb|EEA20917.1| transcription/RNA-processing factor Ssu72 [Talaromyces marneffei
ATCC 18224]
Length = 296
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 115/246 (46%), Gaps = 73/246 (29%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 68 TVCASNNNRSMEAHLQLSRS-YPVISFGTG--------SLV------------------- 99
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G ++ +PNV++F +T+Y +Y+DL NKD+ Y NG+L+ML+RN+
Sbjct: 100 ------------RLPGPSITQPNVFNFDSTSYNHMYEDLYNKDQRLYRNNGILNMLDRNR 147
Query: 129 RIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEHFDNQMI 167
+K PE+FQ DK D+IITCEER +D V++ N+
Sbjct: 148 NLKWGPERFQNWVPGQPRLDHIAKGDKGSLGTEAGVVDVIITCEERCWDAVVDDLLNRGS 207
Query: 168 SLENTPVHLINIDIQDNQEEATLGA-----------FLASELMSMFIKCEDLDNEIDEIM 216
L N PVH+ N+DI+DN EEA G A+E ++ + D E
Sbjct: 208 PL-NRPVHVFNVDIRDNHEEALTGGKAIRDLADMLNAAANEERRLYDDPDAWDRGASEAR 266
Query: 217 QEFEEK 222
Q F+EK
Sbjct: 267 QSFDEK 272
>gi|46108096|ref|XP_381106.1| hypothetical protein FG00930.1 [Gibberella zeae PH-1]
gi|126352772|sp|Q4IPC8.1|SSU72_GIBZE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
Length = 255
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 25 LKFCTVCASNNNRSMEAHLRLSQADYPVISFGTG--------SLV--------------- 61
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ ++++L +KD Y NG+L+ML
Sbjct: 62 ----------------RLPGPTITQPNVYHFNKTSYDSMFKELESKDARLYKNNGILNML 105
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ +KD+ DI+ITCEER +D V++ N+
Sbjct: 106 NRNRGVKWGPERWQDWQVGVPRLQHAKDRGSEGTEGGLVDIVITCEERCWDAVVDDLMNR 165
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN++I+DN EEA +G
Sbjct: 166 GSPL-NRPVHVINVEIKDNHEEAAVGG 191
>gi|68485609|ref|XP_713287.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|68485714|ref|XP_713235.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|46434716|gb|EAK94118.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|46434769|gb|EAK94170.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|238879781|gb|EEQ43419.1| protein SSU72 [Candida albicans WO-1]
Length = 226
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 50/209 (23%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L G DV SFGTG
Sbjct: 8 SLKICTVCASNNNRSMESHKQLMDAGYDVHSFGTG------------------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMN-KDKAFYTRNGLLH 122
+V L G ++DKPNVY+F T Y+ +Y DL++ K + Y NGL+H
Sbjct: 43 ---------TAVRL-----PGPSVDKPNVYEF-GTPYQVMYDDLISQKSRKLYESNGLIH 87
Query: 123 MLERNKRIKLKPEKFQESK--DKFDIIITCEERVYDQVLEHFDNQMISLENTP------- 173
MLERNK +K PEK+ + KFD++ITCEER +D V++ ++M + +
Sbjct: 88 MLERNKSVKEAPEKWHRNAPLGKFDLVITCEERCFDSVIDDLMHRMYDRDPSDNDDVKRL 147
Query: 174 VHLINIDIQDNQEEATLGAFLASELMSMF 202
VH+INIDI+D+ E A +G +L++M
Sbjct: 148 VHVINIDIKDDNENAIIGGKGILKLVNMI 176
>gi|408388073|gb|EKJ67766.1| hypothetical protein FPSE_12038 [Fusarium pseudograminearum CS3096]
Length = 255
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 25 LKFCTVCASNNNRSMEAHLRLSQADYPVISFGTG--------SLV--------------- 61
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ ++++L +KD Y NG+L+ML
Sbjct: 62 ----------------RLPGPTITQPNVYHFNKTSYDSMFKELESKDARLYKNNGILNML 105
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ +KD+ DI+ITCEER +D V++ N+
Sbjct: 106 NRNRGVKWGPERWQDWQVGVPRLQHAKDRGSEGTEGGLVDIVITCEERCWDAVVDDLMNR 165
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN++I+DN EEA +G
Sbjct: 166 GSPL-NRPVHVINVEIKDNHEEAAVGG 191
>gi|440636611|gb|ELR06530.1| RNA polymerase II subunit A domain phosphatase ssu-72 [Geomyces
destructans 20631-21]
Length = 260
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 81/271 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ V SFGTG S+V
Sbjct: 30 LKFCTVCASNNNRSMEAHLRLAAANFPVISFGTG--------SLV--------------- 66
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G +M+ PNVY F+ T+Y+ +Y++L KD Y NG+L+ML
Sbjct: 67 ----------------RLPGASMNTPNVYHFNKTSYDSMYKELDAKDPRLYRANGILNML 110
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ +K++ DI+ITCEER +D V++ ++
Sbjct: 111 DRNRNVKWGPERWQDWQVGMPRLDHAKERGFEGTEGGVADIVITCEERCWDAVVDDLLSR 170
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIKCEDL------------- 208
L N PVH+IN+DI+DN EEA +G LA L + D+
Sbjct: 171 GSPL-NRPVHVINVDIKDNHEEALVGGRGILDLAESLNKAAAEERDIRGASSFDRGSTAG 229
Query: 209 ----DNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + +I+ E++E+ P T+ ++
Sbjct: 230 RSGFDERVPDIIGEWQERWPNLPATWTLAWF 260
>gi|330919141|ref|XP_003298489.1| hypothetical protein PTT_09232 [Pyrenophora teres f. teres 0-1]
gi|311328262|gb|EFQ93404.1| hypothetical protein PTT_09232 [Pyrenophora teres f. teres 0-1]
Length = 282
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ + SFGTG S+V
Sbjct: 52 LKFCTVCASNQNRSMEAHLQLASAHLPTISFGTG--------SLV--------------- 88
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ TTY I+++L ++ A YT NGLL+ML
Sbjct: 89 ----------------RLPGPTITQPNVYRFNDTTYRAIHEELSEQNAALYTHNGLLNML 132
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN IK PE+FQ+ ++DK D++ITCEER +D VLE N+
Sbjct: 133 GRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTESGVVDVVITCEERCFDAVLEDLHNK 192
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+ N+DI+DN EEA +G
Sbjct: 193 GGKL-NRPVHVFNVDIKDNHEEALVGG 218
>gi|396081555|gb|AFN83171.1| Ssu72-like protein [Encephalitozoon romaleae SJ-2008]
Length = 190
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 44/230 (19%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+K+AV C+ N NRSM+ H +KKG+ +KSFGT P+
Sbjct: 1 MKLAVSCAMNQNRSMQTHDLFAKKGIPIKSFGTN-----------------------PVI 37
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G MDKPNVY F T Y+ IY DL K++ +Y +G+L++L
Sbjct: 38 ----------------KLPGETMDKPNVYSFGQT-YQQIYDDLCMKNEDYYRESGILYLL 80
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
ERN R+K KPE F + + FD++ITCEERV+ + EH+ + S ++N DI+D
Sbjct: 81 ERNMRVKEKPENFFQRDEDFDLVITCEERVFTSIFEHYADG--SSCTKSFFMVNFDIKDT 138
Query: 185 QEEATLGAFLASELMSMFIKCED--LDNEIDEIMQEFEEKCSRPLLHTIL 232
+A GA E + + E+ L +D+ ++ + E+ LL T++
Sbjct: 139 PSDAITGAQEILEFVEDVLSLEENGLRYAVDDALRRYFERKGTMLLFTVV 188
>gi|340914682|gb|EGS18023.1| hypothetical protein CTHT_0060370 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 264
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 61/227 (26%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P LK VC+SN NRSME H LS+ V SFGTG S+V
Sbjct: 31 PFRLKFCTVCASNQNRSMEGHLRLSQAKYPVISFGTG--------SLV------------ 70
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G + +PNVY F+ T+Y+ IY++L KD Y NGLL
Sbjct: 71 -------------------RLPGPTITQPNVYKFNETSYDSIYKELEAKDPRLYRMNGLL 111
Query: 122 HMLERNKRIKLKPEKFQESKDKF-------------------DIIITCEERVYDQVLEHF 162
+ML RN+ IK PE++Q+ + DI+ITCEER +D V++
Sbjct: 112 NMLGRNRSIKWGPERWQDWQIGMPRVKHEKDLGSQGMEAGVPDIVITCEERCWDAVIDDL 171
Query: 163 DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMF--IKCED 207
+ L N PVH+INIDI+DN ++A++G +L + CE+
Sbjct: 172 LMRGSPL-NRPVHVINIDIRDNHQDASIGGSAIVDLADSLNKVACEE 217
>gi|358387620|gb|EHK25214.1| hypothetical protein TRIVIDRAFT_32134 [Trichoderma virens Gv29-8]
Length = 253
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 23 LKFCTVCASNQNRSMEAHLRLSQANYPVISFGTG--------SLV--------------- 59
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ +Y++L KD Y NG+L+ML
Sbjct: 60 ----------------RLPGPTITQPNVYQFNKTSYDSMYKELEAKDPRLYRNNGILNML 103
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ + D+ D++ TCEER +D V++ N+
Sbjct: 104 GRNRGVKWGPERWQDWPVGVPRLQHTSDRGSEGTEGGVVDVVFTCEERCWDAVIDDLLNR 163
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN+DI+DN EEA +G
Sbjct: 164 GSPL-NRPVHVINVDIKDNHEEAHIGG 189
>gi|367020102|ref|XP_003659336.1| hypothetical protein MYCTH_2296228 [Myceliophthora thermophila ATCC
42464]
gi|347006603|gb|AEO54091.1| hypothetical protein MYCTH_2296228 [Myceliophthora thermophila ATCC
42464]
Length = 258
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 116/245 (47%), Gaps = 69/245 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ VC+SN NRSME H L++ V SFGTG S+V
Sbjct: 28 LRFCTVCASNQNRSMEGHLRLAQANYPVISFGTG--------SLV--------------- 64
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ IY++L KD Y NGLL+ML
Sbjct: 65 ----------------RLPGPTITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNML 108
Query: 125 ERNKRIKLKPEKFQE----------SKDKF---------DIIITCEERVYDQVLEHFDNQ 165
RN+ IK PE++Q+ KD+ DI+ITCEER +D V++ +
Sbjct: 109 GRNRIIKWGPERWQDWQVGMPRVKHEKDQGSAGMEAGVPDIVITCEERCWDAVVDDLLQR 168
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSR 225
L N PVH+INIDI+DN ++A++G DL + ++++ QE E+
Sbjct: 169 GSPL-NRPVHVINIDIKDNHQDASIGGG----------AIVDLADSLNKVAQEERERVGA 217
Query: 226 PLLHT 230
L +
Sbjct: 218 ALFDS 222
>gi|332261443|ref|XP_003279779.1| PREDICTED: uncharacterized protein LOC100594573, partial [Nomascus
leucogenys]
Length = 400
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TTY+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 27 LPGPAPDKPNVYDF-KTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 85
Query: 142 DKFDIIITCEERVYDQVLE 160
D FD+I+TCEERVYDQV+E
Sbjct: 86 DLFDLILTCEERVYDQVVE 104
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 169 LENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLL 228
L P + I + +A +G + + L ED++NEIDE++QEFEEK R L
Sbjct: 335 LHTRPGVSLVIQVLGGSWQARVGKAVTTGLSLQIQHTEDMENEIDELLQEFEEKSGRTFL 394
Query: 229 HTILFY 234
HT+ FY
Sbjct: 395 HTVCFY 400
>gi|322712001|gb|EFZ03574.1| protein SSU72 [Metarhizium anisopliae ARSEF 23]
Length = 255
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 25 LKFCTVCASNQNRSMEAHLRLSQAEYPVISFGTG--------SLV--------------- 61
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ +Y++L +KD Y NG+L+ML
Sbjct: 62 ----------------RLPGPTITQPNVYQFNKTSYDSMYKELESKDGRLYKANGILNML 105
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ S DK D++ TCEER +D V++ ++
Sbjct: 106 DRNRGVKWGPERWQDWAVGIPRLQHSTDKGSDGTEGGVVDVVFTCEERCWDAVIDDLLSR 165
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN+DI+DN EEA +G
Sbjct: 166 GSPL-NRPVHVINVDIKDNHEEAHIGG 191
>gi|303323513|ref|XP_003071748.1| Ssu72-like protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111450|gb|EER29603.1| Ssu72-like protein [Coccidioides posadasii C735 delta SOWgp]
Length = 299
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH L+ V SFGTG S+V
Sbjct: 65 LKFCTVCAANQNRSMEAHNRLAAPPSSYPVISFGTG--------SLV------------- 103
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G + +PNVY+F+T +Y IY +L +KD Y NG+L
Sbjct: 104 ------------------RLPGPTITQPNVYNFNTVSYSQIYDELQSKDPRLYRNNGVLP 145
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+ +K PE+FQE DK D+IITCEE+ +D V++
Sbjct: 146 MLDRNRSVKWGPERFQEWLPGMPRLDHVSRGDKGSLGTEGGIVDVIITCEEKCWDAVVDD 205
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + D
Sbjct: 206 LMNRGAPL-NRPVHVFNVDIRDNHEEALIGSKAILDLADRLNESADQERKINGIDGWDQG 264
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D ++ EI+ +++EK P L T+ ++
Sbjct: 265 GGAARKGFDEKVPEILAKWQEKWPNLPALWTLSWF 299
>gi|189209429|ref|XP_001941047.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977140|gb|EDU43766.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 281
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 102/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ + SFGTG S+V
Sbjct: 51 LKFCTVCASNQNRSMEAHLQLASAHLPTISFGTG--------SLV--------------- 87
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ TTY I+ +L ++ A YT NGLL+ML
Sbjct: 88 ----------------RLPGPTITQPNVYRFNDTTYRAIHDELTEQNAALYTHNGLLNML 131
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN IK PE+FQ+ ++DK D++ITCEER +D VLE N+
Sbjct: 132 GRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTESGVVDVVITCEERCFDAVLEDLHNK 191
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+ N+DI+DN EEA +G
Sbjct: 192 GGKL-NRPVHVFNVDIKDNHEEALVGG 217
>gi|119188867|ref|XP_001245040.1| hypothetical protein CIMG_04481 [Coccidioides immitis RS]
gi|392867946|gb|EAS33667.2| RNA polymerase II subunit A domain phosphatase ssu72 [Coccidioides
immitis RS]
Length = 299
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 123/275 (44%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH L+ V SFGTG S+V
Sbjct: 65 LKFCTVCAANQNRSMEAHNRLAAPPSSYPVISFGTG--------SLV------------- 103
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G + +PNVY+F+T +Y IY +L +KD Y NG+L
Sbjct: 104 ------------------RLPGPTITQPNVYNFNTVSYSQIYDELQSKDPRLYRNNGVLP 145
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
ML+RN+ +K PE+FQE DK D+IITCEE+ +D V++
Sbjct: 146 MLDRNRSVKWGPERFQEWLPGMPRLDHVSRGDKGSLGTEGGIVDVIITCEEKCWDAVVDD 205
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+DN EEA +G+ +L + D
Sbjct: 206 LMNRGAPL-NRPVHVFNVDIRDNHEEALIGSKAILDLADRLNESADQERKINGIDGWDQG 264
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D ++ EI+ +++EK P L T+ ++
Sbjct: 265 GGAARKGFDEKVPEILAKWQEKWPNLPALWTLSWF 299
>gi|405120322|gb|AFR95093.1| phosphoprotein phosphatase [Cryptococcus neoformans var. grubii
H99]
Length = 339
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 100/193 (51%), Gaps = 45/193 (23%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
+P + + C +NRSMEAH L+K V S GTG S V
Sbjct: 180 VPQGRRRPLFC---VNRSMEAHYVLNKNSFRVVSAGTG--------SAV----------- 217
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G A+DKPNVY F T Y+DIY+DL ++D YTRNG+
Sbjct: 218 --------------------RLPGPAIDKPNVYRF-GTPYDDIYRDLESQDPQLYTRNGI 256
Query: 121 LHMLERNKRIKLKPEKFQESKDKF-DIIITCEERVYDQVLEHFDNQMISLENTPVHLINI 179
L ML+RN+++K PEK+QE K D++ITCEER YD V + + N P+H+INI
Sbjct: 257 LPMLDRNRKVKKAPEKWQELKSVLADVVITCEERCYDAVCDDLLTRSGEY-NRPIHIINI 315
Query: 180 DIQDNQEEATLGA 192
+I+DN EEA +
Sbjct: 316 EIKDNPEEAHIAG 328
>gi|400603013|gb|EJP70611.1| Ssu72-like protein [Beauveria bassiana ARSEF 2860]
Length = 254
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 104/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 24 LKFCTVCASNQNRSMEAHLRLSQANYPVISFGTG--------SLV--------------- 60
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ +Y++L +KD Y NG+L+ML
Sbjct: 61 ----------------RLPGPTITQPNVYQFNKTSYDSMYKELESKDSRLYKNNGILNML 104
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ + D+ D++ TCEER +D V++ N+
Sbjct: 105 SRNRGVKWGPERWQDWAIGVPRLKHTTDRGSEGSEGGVVDVVFTCEERCWDAVVDDLMNR 164
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN++I+DN EEA +G
Sbjct: 165 GSPL-NRPVHVINVEIKDNHEEAHIGG 190
>gi|302923818|ref|XP_003053757.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734698|gb|EEU48044.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 255
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 25 LTFCTVCASNNNRSMEAHLRLSQAEYPVISFGTG--------SLV--------------- 61
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ ++++L +KD Y NG+L+ML
Sbjct: 62 ----------------RLPGPTITQPNVYHFNKTSYDSMFKELESKDPRLYKNNGILNML 105
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ SKD+ D++ITCEER +D V++ N+
Sbjct: 106 NRNRGVKWGPERWQDWQVGVPRLNHSKDRGSEGTEGGLVDVVITCEERCWDAVIDDLLNR 165
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN++I+DN EEA +G
Sbjct: 166 GSPL-NRPVHVINVEIKDNHEEAAVGG 191
>gi|302416011|ref|XP_003005837.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Verticillium albo-atrum VaMs.102]
gi|261355253|gb|EEY17681.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Verticillium albo-atrum VaMs.102]
Length = 258
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSM +H L++ V SFGTG S+V
Sbjct: 28 LKFCTVCASNQNRSMVSHLRLAEANYPVISFGTG--------SLV--------------- 64
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ IY++L +KD Y +NG+L+M+
Sbjct: 65 ----------------RLPGPSITQPNVYHFNKTSYDSIYRELQSKDPKLYVQNGVLNMV 108
Query: 125 ERNKRIKLKPEKFQESK------DK-------------FDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ + DK DI+ITCEER +D V++ +
Sbjct: 109 DRNRNVKWGPERWQDWQVGMPRLDKPDDRGSQGVEGGIVDIVITCEERCWDAVIDDLMAR 168
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
+ N PVH+IN+DI+DN EEA++G
Sbjct: 169 GAPM-NRPVHVINVDIKDNHEEASVGG 194
>gi|346973884|gb|EGY17336.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Verticillium dahliae VdLs.17]
Length = 258
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSM +H L++ V SFGTG S+V
Sbjct: 28 LKFCTVCASNQNRSMVSHLRLAEANYPVISFGTG--------SLV--------------- 64
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ IY++L +KD Y +NG+L+M+
Sbjct: 65 ----------------RLPGPSITQPNVYHFNKTSYDSIYRELQSKDPKLYVQNGVLNMV 108
Query: 125 ERNKRIKLKPEKFQESK------DK-------------FDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ + DK DI+ITCEER +D V++ +
Sbjct: 109 DRNRNVKWGPERWQDWQVGMPRLDKPDDRGSQGVEGGIVDIVITCEERCWDAVIDDLMAR 168
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
+ N PVH+IN+DI+DN EEA++G
Sbjct: 169 GAPM-NRPVHVINVDIKDNHEEASVGG 194
>gi|169595608|ref|XP_001791228.1| hypothetical protein SNOG_00546 [Phaeosphaeria nodorum SN15]
gi|111070921|gb|EAT92041.1| hypothetical protein SNOG_00546 [Phaeosphaeria nodorum SN15]
Length = 284
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 102/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH L+ + SFGTG S+V
Sbjct: 53 LKFCTVCASNQNRSMEAHLQLASAHLPTISFGTG--------SLV--------------- 89
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G +PNVY F++TTY I+ +L ++ A YT NGLL+ML
Sbjct: 90 ----------------RLPGPTAMQPNVYHFNSTTYRAIHDELAQQNTALYTHNGLLNML 133
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN IK PE+FQ+ ++DK D++ITCEER +D VLE N+
Sbjct: 134 GRNLNIKGFPERFQDWVPGKPRLEHAEDKGFQGTESGVADVVITCEERCFDAVLEDLHNK 193
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+ N+DI+DN EEA +G
Sbjct: 194 GGKL-NRPVHVFNVDIKDNHEEALVGG 219
>gi|402079245|gb|EJT74510.1| RNA polymerase II subunit A domain phosphatase SSU72
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 254
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 81/271 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 24 LKFCTVCASNQNRSMEAHLRLSQANFPVISFGTG--------SLV--------------- 60
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ TTY+++Y++L KD Y NG+L+ML
Sbjct: 61 ----------------RLPGPTITQPNVYKFNDTTYDNMYKELEGKDPRLYRANGILNML 104
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ + D+ D++ TCEER +D V++ +
Sbjct: 105 GRNRNVKRNPERWQDWQIGIPRLDHASDRGSAGTEGGVVDVVFTCEERCWDAVIDDLHAR 164
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIKCED-------------- 207
L N VH+IN+DI+DN EEA +G LA L + ++ D
Sbjct: 165 GSPL-NRAVHVINVDIKDNHEEAAIGGSGILDLAESLNKVAMEERDKVGAAVFDGAGGAG 223
Query: 208 ---LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + E++ E++E+ P T+ ++
Sbjct: 224 RSGFDERVPEVLAEWQERWPNLPATWTLAWF 254
>gi|255722129|ref|XP_002545999.1| protein SSU72 [Candida tropicalis MYA-3404]
gi|240136488|gb|EER36041.1| protein SSU72 [Candida tropicalis MYA-3404]
Length = 226
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 68/259 (26%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L G DV SFGTG K
Sbjct: 8 SLKICTVCASNNNRSMESHKQLQDAGYDVHSFGTGTK----------------------- 44
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKD-KAFYTRNGLLH 122
+ G ++D+PNVYDF T Y+++Y DL ++D + Y NG++
Sbjct: 45 ----------------VRLPGPSIDRPNVYDF-GTPYKNMYDDLTSQDCRKLYETNGVIS 87
Query: 123 MLERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLE-----HFDNQMISLENTP-- 173
ML RN ++K PEK+ + KFD++ITCEER +D V+E +D + ++
Sbjct: 88 MLSRNMQVKKAPEKWHNNATSGKFDLVITCEERCFDSVIEDLMHREYDKEAADHDDIRRL 147
Query: 174 VHLINIDIQDNQEEATLGAFLASELMSMF-----IKCEDLDNEIDE------------IM 216
VH+IN+DI+D+ E A +G +L++M K ++L +E+++ I+
Sbjct: 148 VHIINVDIKDDNENAIMGGKGILKLVNMIHDFKRKKQQELGDEVEDESHLILEDQMMGIL 207
Query: 217 QEFE-EKCSRPLLHTILFY 234
E++ E P L+++ +Y
Sbjct: 208 TEWQKEHVHLPTLYSVSYY 226
>gi|380486675|emb|CCF38544.1| RNA polymerase II subunit A domain phosphatase SSU72
[Colletotrichum higginsianum]
Length = 255
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSM +H L+ V SFGTG
Sbjct: 25 LKFCTVCASNQNRSMVSHLRLANANYPVISFGTGS------------------------- 59
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ I+++L +KD Y NG+L+M+
Sbjct: 60 --------------LVRLPGPSITQPNVYHFNKTSYDSIFKELESKDPRLYRANGVLNMV 105
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ + D+ DI+ITCEER +D V++ N+
Sbjct: 106 DRNRHVKWGPERWQDWQVGMPRLTHTDDRGSAGVEGGVVDIVITCEERCWDAVIDDLMNR 165
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN+DI+DN EEA++G
Sbjct: 166 GAPL-NRPVHVINVDIKDNHEEASVGG 191
>gi|115442658|ref|XP_001218136.1| protein SSU72 [Aspergillus terreus NIH2624]
gi|114188005|gb|EAU29705.1| protein SSU72 [Aspergillus terreus NIH2624]
Length = 219
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 104/207 (50%), Gaps = 63/207 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 50 LRFCTVCASNQNRSMEAHLRLSSAPSPFPVISFGTG--------SLV------------- 88
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+TT+Y +Y +L+ KD+ Y NGLL+
Sbjct: 89 ------------------RLPGPSITQPNVYNFNTTSYAQMYDELLAKDERLYRHNGLLN 130
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERN+ +K PE+FQ+ DK D+IITCEER +D V++
Sbjct: 131 MLERNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGVVDVIITCEERCWDAVVDD 190
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEA 188
N+ +L N PVH+ N+DI+DN EEA
Sbjct: 191 LMNKGSAL-NRPVHVFNVDIKDNHEEA 216
>gi|453086786|gb|EMF14828.1| RNA polymerase II subunit A C-terminal domain phosphatase ssu72,
partial [Mycosphaerella populorum SO2202]
Length = 267
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 109/232 (46%), Gaps = 78/232 (33%)
Query: 5 LKVAVVCSSNMNRSMEAHAYL--SKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
L+ VC+SN NRSMEAH L S + V SFGTG S+V
Sbjct: 6 LRFCTVCASNNNRSMEAHLRLTSSPQQYPVLSFGTG--------SLV------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ PNVY+F++T+YE +YQ+L KDK Y+ NG+L+
Sbjct: 45 ------------------RLPGASLHSPNVYNFNSTSYEQMYQELKEKDKRLYSANGILN 86
Query: 123 MLERNKRIKLKPEKFQE---------------------------SKDK---------FDI 146
MLERNK IK PE++Q+ S+D+ DI
Sbjct: 87 MLERNKNIKWGPERWQDWRVGVPRVGKRVIGKQKEAAARIEAEWSQDRGSAGAESGVVDI 146
Query: 147 IITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
+ TCEER +D V++ + L N PVH+ N+DI+DN EEA +G EL
Sbjct: 147 VFTCEERCWDAVVDDLLTRGAPL-NRPVHVFNVDIKDNHEEALVGGRAILEL 197
>gi|398408808|ref|XP_003855869.1| hypothetical protein MYCGRDRAFT_35093 [Zymoseptoria tritici IPO323]
gi|339475754|gb|EGP90845.1| hypothetical protein MYCGRDRAFT_35093 [Zymoseptoria tritici IPO323]
Length = 275
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 85/275 (30%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKK---GVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
LK VC+SN NRSMEAH L+ SFGTG S+V
Sbjct: 41 LKFCTVCASNNNRSMEAHLRLTTAQPTPYPTISFGTG--------SLV------------ 80
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G ++ +PNVY+F++T+Y +Y +L +KD+ Y+ NG+L
Sbjct: 81 -------------------RLPGPSISQPNVYNFNSTSYASMYDELASKDRRLYSANGIL 121
Query: 122 HMLERNKRIKLKPEKFQESK----------DK---------FDIIITCEERVYDQVLEHF 162
MLERNK +K PE++Q+ + DK D++ITCEER +D V++
Sbjct: 122 PMLERNKNVKFGPERWQDWRVGVPRTEWGDDKGAKGTEAGTVDVVITCEERCWDAVVDDL 181
Query: 163 DNQMISLENTPVHLINIDIQDNQEEATLGAF-----------LASELMSMFIKC------ 205
+ L N PVH+ N+DI+DN EEA +G +A E ++K
Sbjct: 182 LTRGSPL-NRPVHVFNVDIKDNHEEALVGGRAILELADKLNEVAVEEREAYVKGGGRGFE 240
Query: 206 -----EDLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + +++ E++E+ P L T+ ++
Sbjct: 241 NGEGRSGFDERVPDVLAEWQERWPNLPALWTLAWF 275
>gi|303288437|ref|XP_003063507.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455339|gb|EEH52643.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 181
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 45/226 (19%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
+VC++NMNRSMEAH L ++G+DVKS+G G+
Sbjct: 1 MVCAANMNRSMEAHRVLLERGLDVKSYGAGN----------------------------- 31
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G + D PNV+ F +Y+ IY LM + NGL MLERN
Sbjct: 32 ----------HVKLPGASRDNPNVFSFGVESYQQIYDALMEQGA-----NGLKDMLERNM 76
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+IK +P+++Q+ + D++I EERV+D V+E P+ +IN+D+ D+ EEA
Sbjct: 77 KIKPRPQRWQDEPIEVDVVICFEERVFDNVVEDV-RGRGGGGGEPLLVINLDVVDSHEEA 135
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
A +L ++ + ED + E DEIM F+ + R +++I ++
Sbjct: 136 LKAGPRALKLCALIDESEDWECECDEIMDTFQAEEGRRPIYSICYH 181
>gi|443924041|gb|ELU43118.1| phosphoprotein phosphatase [Rhizoctonia solani AG-1 IA]
Length = 634
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 109/225 (48%), Gaps = 57/225 (25%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
VVC+SN NRSMEAH L++ G V S GTG S V
Sbjct: 146 VVCASNQNRSMEAHNVLARAGFRVISSGTG--------SAV------------------- 178
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ G D+PN+Y F T Y+D++ DL N+D NGLL ML+RN+
Sbjct: 179 ------------RLPGPTADRPNIYAF-GTPYDDMWNDLHNQDP-----NGLLKMLDRNR 220
Query: 129 RIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEA 188
+IK PE++Q+++ + D++IT +L N PVH+IN++I+DN EEA
Sbjct: 221 KIKRAPERWQDNRTQADVVIT-------YLLSRGGE-----SNRPVHVINVEIKDNHEEA 268
Query: 189 TLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
+L + +DLD ++ I+ +E+ LLH +L+
Sbjct: 269 LKAGLAIQDLAAAIEGSDDLDQDMTRILATQQERHPHSLLHALLY 313
>gi|190345636|gb|EDK37559.2| hypothetical protein PGUG_01657 [Meyerozyma guilliermondii ATCC
6260]
Length = 223
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 49/208 (23%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L G DVKSFGTG S V
Sbjct: 5 SLKICTVCASNNNRSMESHKQLKDAGYDVKSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDK-AFYTRNGLLH 122
+ G ++D+PNVY+F T YEDIY DLM+++ Y NGL+H
Sbjct: 43 -----------------RLPGPSIDRPNVYEF-GTPYEDIYNDLMSQEAHKMYESNGLIH 84
Query: 123 MLERNKRIKLKPEKFQES--KDKFDIIITCEERVYDQVLEHFDNQMISLENTPVH----- 175
ML RN+ +K PEK+ + KFD++ITCEER +D V++ ++++ E+
Sbjct: 85 MLNRNRHVKRAPEKWHANAYAGKFDLVITCEERCFDSVIDDLMYRLVNKEDADTEVKQVV 144
Query: 176 -LINIDIQDNQEEATLGAFLASELMSMF 202
++N+DI+D+ E A +GA +L++M
Sbjct: 145 HVVNVDIKDDNENAFIGAKGIVKLVTMI 172
>gi|384487070|gb|EIE79250.1| hypothetical protein RO3G_03955 [Rhizopus delemar RA 99-880]
Length = 126
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G +++KPN+Y F T YE +YQ+L +D YT+NGLL+ML+RN++ K P+++ ES+
Sbjct: 4 LPGPSINKPNIYPF-GTPYEQVYQELKRQDPNLYTQNGLLNMLDRNRKTKSAPQRWHESR 62
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
+ FD+IITCEER +D V+E N+ +L N H+IN++I+DN E+A LG +L M
Sbjct: 63 EVFDVIITCEERCFDSVVEDLANRGQNL-NQSTHVINVEIKDNHEDALLGGRAILQLAQM 121
Query: 202 FI 203
+
Sbjct: 122 VV 123
>gi|358390946|gb|EHK40351.1| hypothetical protein TRIATDRAFT_153298 [Trichoderma atroviride IMI
206040]
Length = 254
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 102/207 (49%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L+ VC+SN NRSMEAH LS+ V SFGTG S+V
Sbjct: 24 LRFCTVCASNNNRSMEAHLRLSQANYPVISFGTG--------SLV--------------- 60
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G + +PNVY F+ T+Y+ +Y++L KD Y NG+L+ML
Sbjct: 61 ----------------RLPGPTITQPNVYQFNKTSYDSMYKELEAKDSRLYRNNGILNML 104
Query: 125 ERNKRIKLKPEKFQE----------SKDKFD---------IIITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ S DK ++ TCEER +D V++ N+
Sbjct: 105 GRNRGVKWGPERWQDWPVGVPRLQHSSDKGSEGVEGGVVDVVFTCEERCWDAVIDDLLNR 164
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+INIDI+DN EEA +G
Sbjct: 165 GSPL-NRPVHVINIDIKDNHEEAAVGG 190
>gi|146420056|ref|XP_001485986.1| hypothetical protein PGUG_01657 [Meyerozyma guilliermondii ATCC
6260]
Length = 223
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 49/208 (23%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L G DVKSFGTG S V
Sbjct: 5 SLKICTVCASNNNRSMESHKQLKDAGYDVKSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDK-AFYTRNGLLH 122
+ G +D+PNVY+F T YEDIY DLM+++ Y NGL+H
Sbjct: 43 -----------------RLPGPLIDRPNVYEF-GTPYEDIYNDLMSQEAHKMYESNGLIH 84
Query: 123 MLERNKRIKLKPEKFQES--KDKFDIIITCEERVYDQVLEHFDNQMISLENTPVH----- 175
ML RN+ +K PEK+ + KFD++ITCEER +D V++ ++++ E+
Sbjct: 85 MLNRNRHVKRAPEKWHANAYAGKFDLVITCEERCFDSVIDDLMYRLVNKEDADTEVKQVV 144
Query: 176 -LINIDIQDNQEEATLGAFLASELMSMF 202
++N+DI+D+ E A +GA +L++M
Sbjct: 145 HVVNVDIKDDNENAFIGAKGIVKLVTMI 172
>gi|378729852|gb|EHY56311.1| hypothetical protein, variant [Exophiala dermatitidis NIH/UT8656]
gi|378729853|gb|EHY56312.1| hypothetical protein HMPREF1120_04396 [Exophiala dermatitidis
NIH/UT8656]
Length = 347
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 122/279 (43%), Gaps = 85/279 (30%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKG--VDVKSFGTGDKKPQQWESVVIFHCCDFCS 58
+P L+ VC+SN NRSMEAH LS V SFGTG
Sbjct: 109 IPFKLRFCTVCASNNNRSMEAHLRLSTSEHHYPVISFGTGS------------------- 149
Query: 59 ELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRN 118
+ + G ++ +P VY+F+TT+Y +Y++L +D Y N
Sbjct: 150 --------------------YVRLPGPSISQPQVYNFNTTSYTKMYEELNAQDARLYRNN 189
Query: 119 GLLHMLERNKRIKLKPEKFQ------------ESKDK---------FDIIITCEERVYDQ 157
G+L+ML+RN+ IK PE+F + DK D+I TCEER +D
Sbjct: 190 GILNMLDRNRNIKWGPERFHDWVVGQARMDALQRGDKGAEGTEGGIVDVIFTCEERCWDA 249
Query: 158 VLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKC------------ 205
V+++ ++ L N PVH+ NIDI+DN EEA +G EL M +
Sbjct: 250 VVDNLLDRGAPL-NRPVHVFNIDIKDNHEEALIGGGAILELADMLNEAAAQERKIQGTAG 308
Query: 206 ---------EDLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
+ D + +I+ ++EK P L T+ ++
Sbjct: 309 WENGSGAARQSFDERVPDILATWQEKWPNLPALWTLSWF 347
>gi|19074334|ref|NP_585840.1| SSU72 PROTEIN HOMOLOG [Encephalitozoon cuniculi GB-M1]
gi|449329472|gb|AGE95744.1| SSU72 protein like-protein [Encephalitozoon cuniculi]
Length = 193
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 44/230 (19%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+K+AV C+ N NRSM+ H L+KKG+ VKSFGT P+
Sbjct: 4 MKLAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTN-----------------------PVI 40
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G MDKPNVY+F T Y+ IY DL K++ Y +G+L++L
Sbjct: 41 ----------------KLPGETMDKPNVYNFGVT-YQQIYDDLCMKNEDHYRESGILYLL 83
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
ERN +K +PE F + + FD++ITCEERV+ + E++ + + ++N DI+D
Sbjct: 84 ERNMGVKERPENFFQRSEDFDLVITCEERVFTSIFEYYADAPSCTQC--FFMVNFDIRDT 141
Query: 185 QEEATLGAFLASELMSMFIKCED--LDNEIDEIMQEFEEKCSRPLLHTIL 232
+A GA E + + E+ L+ +D ++ + E+ LL T++
Sbjct: 142 PSDAIAGAQEILEFVEDVLAKEEERLEYAVDSALRRYFERKGVMLLFTVV 191
>gi|392512706|emb|CAD25444.2| SSU72 PROTEIN HOMOLOG [Encephalitozoon cuniculi GB-M1]
Length = 190
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 44/230 (19%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+K+AV C+ N NRSM+ H L+KKG+ VKSFGT P+
Sbjct: 1 MKLAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTN-----------------------PVI 37
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G MDKPNVY+F T Y+ IY DL K++ Y +G+L++L
Sbjct: 38 ----------------KLPGETMDKPNVYNFGVT-YQQIYDDLCMKNEDHYRESGILYLL 80
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDN 184
ERN +K +PE F + + FD++ITCEERV+ + E++ + + ++N DI+D
Sbjct: 81 ERNMGVKERPENFFQRSEDFDLVITCEERVFTSIFEYYADAPSCTQC--FFMVNFDIRDT 138
Query: 185 QEEATLGAFLASELMSMFIKCED--LDNEIDEIMQEFEEKCSRPLLHTIL 232
+A GA E + + E+ L+ +D ++ + E+ LL T++
Sbjct: 139 PSDAIAGAQEILEFVEDVLAKEEERLEYAVDSALRRYFERKGVMLLFTVV 188
>gi|323303341|gb|EGA57137.1| Ssu72p [Saccharomyces cerevisiae FostersB]
gi|323346815|gb|EGA81094.1| Ssu72p [Saccharomyces cerevisiae Lalvin QA23]
Length = 184
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 112/225 (49%), Gaps = 50/225 (22%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
ME+H L + G +V S+GTG S V
Sbjct: 1 MESHKVLQEAGYNVSSYGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL ML+RN+R+K PEK+Q
Sbjct: 24 --RLPGLSIDKPNVYSF-GTPYNDIYNDLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQ 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
ES FD + TCEER +D V E N+ L N VH+IN+DI+D+ E A +G+ EL
Sbjct: 81 ESTKVFDFVFTCEERCFDAVCEDLMNRGGKL-NKIVHVINVDIKDDDENAKIGSKAILEL 139
Query: 199 MSMFI----KCEDLD----NEIDEIMQEFEEKCSR-PLLHTILFY 234
M +CE D + I +I+ E++ S+ P L+ +Y
Sbjct: 140 ADMLNDKIEQCEKDDIPFEDCIMDILTEWQSSHSQLPSLYAPSYY 184
>gi|407919991|gb|EKG13210.1| RNA polymerase II subunit A [Macrophomina phaseolina MS6]
Length = 291
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 123/271 (45%), Gaps = 81/271 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSMEAH LS V SFGTG S+V
Sbjct: 61 LKFCTVCASNNNRSMEAHLQLSAAQYPVISFGTG--------SLV--------------- 97
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F++TTY+ +Y++L +KD Y NG+L+ML
Sbjct: 98 ----------------RLPGPSISQPNVYAFNSTTYDAMYRELESKDARLYRANGILNML 141
Query: 125 ERNKRIKLKPEKFQESK----------DKFDI---------IITCEERVYDQVLEHFDNQ 165
+RN+ K PE++Q+ + DK + +ITCEER +D V++ N+
Sbjct: 142 DRNRNTKRYPERWQDWRVGVPRVSHKEDKGAMGVEGGVVDVVITCEERCWDAVVDDLLNR 201
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCE------------------- 206
L N PVH+ N+DI+DN EEA +G +L + +
Sbjct: 202 GSPL-NRPVHVFNVDIKDNHEEALVGGKAILDLATRLNEAAREERALKGPQGWDRGQGSA 260
Query: 207 --DLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ ++EK P L T+ ++
Sbjct: 261 RIGFDERVPEILGTWQEKWPNLPALWTLAWF 291
>gi|452983764|gb|EME83522.1| hypothetical protein MYCFIDRAFT_6894, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 262
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 126/295 (42%), Gaps = 105/295 (35%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVD---VKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
L+ VC+SN NRSMEAH L+ SFGTG S+V
Sbjct: 8 LRFCTVCASNNNRSMEAHLRLTTAPSGPYPTISFGTG--------SLV------------ 47
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G ++ +PNVY F++T+Y ++Y +L+ KDK Y NG+L
Sbjct: 48 -------------------RLPGPSISQPNVYTFNSTSYANMYDELLAKDKRLYNANGIL 88
Query: 122 HMLERNKRIKLKPEKFQE---------------------------SKDK---------FD 145
MLERNK +K PE++Q+ S+DK D
Sbjct: 89 PMLERNKNVKWGPERWQDWKVGVPRVGKRWVNPQQQEGVVADAEYSEDKGYQGTEAGTVD 148
Query: 146 IIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGA-----------FL 194
I+ITCEER +D V++ ++ L N PVH+ N+DI+DN EEA +G
Sbjct: 149 IVITCEERCWDAVIDDLLSRGSPL-NRPVHVFNVDIKDNHEEALVGGRAILELADALNAA 207
Query: 195 ASELMSMFIKC--------------EDLDNEIDEIMQEFEEKCS-RPLLHTILFY 234
A E F+ C E D + +I+ ++E+ P L T+ ++
Sbjct: 208 AREEREGFLSCGGSAEGFDRGRAGREGFDERVPDILARWQERWPLLPALWTLAWF 262
>gi|149246603|ref|XP_001527728.1| protein SSU72 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447682|gb|EDK42070.1| protein SSU72 [Lodderomyces elongisporus NRRL YB-4239]
Length = 221
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 108/208 (51%), Gaps = 50/208 (24%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+LK+ VC+SN NRSME+H L G DV SFGTG S V
Sbjct: 5 SLKICTVCASNNNRSMESHKQLMDAGYDVHSFGTG--------SAV-------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKA-FYTRNGLLH 122
+ G ++DKPNVY+F T YE I QDL++++ Y NG+L
Sbjct: 43 -----------------RLPGPSIDKPNVYEF-GTPYEKILQDLVSQNAGNTYEHNGVLS 84
Query: 123 MLERNKRIKLKPEKFQES--KDKFDIIITCEERVYDQVLEHF------DNQMISLENTPV 174
ML RNK +K PEK+ + KFD++ITCEER +D V+E +Q + L+ V
Sbjct: 85 MLRRNKDVKKAPEKWHSNYYAGKFDLVITCEERCFDSVMEDLMFRMSNRDQKMELKRV-V 143
Query: 175 HLINIDIQDNQEEATLGAFLASELMSMF 202
H+IN++I+D+ E A +G +L++M
Sbjct: 144 HVINVEIRDDNENAIIGGRGILKLVNMI 171
>gi|156054334|ref|XP_001593093.1| hypothetical protein SS1G_06015 [Sclerotinia sclerotiorum 1980]
gi|154703795|gb|EDO03534.1| hypothetical protein SS1G_06015 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 260
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 80/270 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSME+H L+ V SFGTG S+V
Sbjct: 31 LKFCTVCASNNNRSMESHLRLAAAHYPVISFGTG--------SLV--------------- 67
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ +Y++L +KD Y NG+L+ML
Sbjct: 68 ----------------RLPGPSISQPNVYQFNKTSYDSMYKELESKDPRLYRANGILNML 111
Query: 125 ERNKRIKLKPEKFQESKDKFDII-------------------ITCEERVYDQVLEHFDNQ 165
RN+ +K PE++Q+ + + ITCEER +D V++ N+
Sbjct: 112 GRNRSVKWGPERWQDWQVGVPRLQHNTDQGAEGVEGGVVDVVITCEERCWDAVVDDLLNR 171
Query: 166 MISLENTPVHLINIDIQDNQEEATLGAF----LASELMSMFIKCEDL------------- 208
L N PVH+IN+DI+DN EEA +G LA L + +L
Sbjct: 172 GSPL-NRPVHVINVDIKDNHEEALVGGRGILDLADSLNKAAAEERELNPTGFDSGSASSR 230
Query: 209 ---DNEIDEIMQEFEEKCSR-PLLHTILFY 234
D + EI+ E++E+ P + T+ ++
Sbjct: 231 AGFDERVPEIIGEWQERWPNLPAVWTLAWF 260
>gi|449017071|dbj|BAM80473.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 219
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 63/249 (25%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+L+ A+VC+SNMNRSME+HA L K+G +V SFGTG
Sbjct: 8 SLRFAMVCASNMNRSMESHALLQKRGFNVWSFGTG------------------------- 42
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHM 123
N+ + GTA DKP VY+F Y +IY++L +++ ++ +L M
Sbjct: 43 -----------ANV---KLPGTAPDKPIVYNFRVP-YREIYEELRAQNEEYFRNASVLPM 87
Query: 124 LERNKRIKLKPEKFQE---SKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID 180
LERN +K PE++Q+ S+ FD++++ EERV++ +LE Q ++ +H+IN++
Sbjct: 88 LERNMAVKPAPERWQDREASRQHFDVVVSFEERVFEAILEDC-QQREPVDFELMHVINLE 146
Query: 181 IQDNQEEATLGAFLA---SELMSMFIKCE----------------DLDNEIDEIMQEFEE 221
++D +A GA LA EL+ ++ D + ++ ++ FE+
Sbjct: 147 VRDTYADAAEGAVLALHLCELLEAALQSRADSGRYSEPVLMDSGHDASDPVERVLYAFED 206
Query: 222 KCSRPLLHT 230
+ R LL++
Sbjct: 207 RTGRRLLYS 215
>gi|401826676|ref|XP_003887431.1| Ssu72-like RNA polymerase II-interacting protein [Encephalitozoon
hellem ATCC 50504]
gi|395459949|gb|AFM98450.1| Ssu72-like RNA polymerase II-interacting protein [Encephalitozoon
hellem ATCC 50504]
Length = 190
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 54/235 (22%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+K+AV C+ N NRSM+ H KKG+ +KSFGT P+
Sbjct: 1 MKLAVSCAMNQNRSMQTHDLFMKKGIPIKSFGTN-----------------------PVI 37
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G +++PNVY F T Y+ IY DL K++ +Y +G+L++L
Sbjct: 38 ----------------KLPGETVERPNVYSFDNT-YQQIYDDLCMKNEDYYRESGILYLL 80
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTP-----VHLINI 179
ERN R+K KPE F + + FD++ITCEERV+ + EH+ ++P ++N
Sbjct: 81 ERNMRVKEKPENFFQRDEDFDLVITCEERVFTSIFEHY-------VDSPSCTRFFFMVNF 133
Query: 180 DIQDNQEEATLGAFLASELMS--MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTIL 232
DI+D +A GA E + + ++ E L+ +D ++ + E+ LL T++
Sbjct: 134 DIKDTPSDAITGAQEILEFVEDVLSLEEEGLEYAVDAALRRYFERKGAMLLFTVV 188
>gi|324526956|gb|ADY48735.1| RNA polymerase II subunit A C-terminal domain phosphatase [Ascaris
suum]
Length = 127
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 39/144 (27%)
Query: 15 MNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQIS 74
MNRSMEAH++L K+G +V+SFG+G +
Sbjct: 1 MNRSMEAHSFLQKRGFNVESFGSGSQV--------------------------------- 27
Query: 75 VNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKP 134
+ G + D+PN Y+F +Y+ IY DL +KD YT+NGLL+ML+RN+RIK P
Sbjct: 28 ------KLPGPSPDRPNCYEFGVASYDFIYNDLKSKDPQLYTQNGLLNMLDRNRRIKGMP 81
Query: 135 EKFQESKDKFDIIITCEERVYDQV 158
+KFQ K KFD+II EERVYDQV
Sbjct: 82 QKFQHFKGKFDVIICLEERVYDQV 105
>gi|449303857|gb|EMC99864.1| hypothetical protein BAUCODRAFT_64218 [Baudoinia compniacensis UAMH
10762]
Length = 271
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 61/209 (29%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVK--SFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC+SN NRSMEAH L+ SFGTG S+V
Sbjct: 33 LKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTG--------SLV------------- 71
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY F++T+Y +Y +L KD+ Y NG+L
Sbjct: 72 ------------------RLPGPSISQPNVYHFNSTSYAAMYNELAAKDQRLYRANGILP 113
Query: 123 MLERNKRIKLKPEKFQESK----------DK---------FDIIITCEERVYDQVLEHFD 163
MLERNK +K PE++Q+ + DK DI+ITCEER +D V++
Sbjct: 114 MLERNKGVKWGPERWQDWQVGVPRAEYKTDKGYMGTEAGTVDIVITCEERCWDAVIDDLL 173
Query: 164 NQMISLENTPVHLINIDIQDNQEEATLGA 192
+ L N PVH+ N+DI+DN EEA +G
Sbjct: 174 TRGSPL-NRPVHVFNVDIKDNHEEALVGG 201
>gi|67526705|ref|XP_661414.1| hypothetical protein AN3810.2 [Aspergillus nidulans FGSC A4]
gi|40740828|gb|EAA60018.1| hypothetical protein AN3810.2 [Aspergillus nidulans FGSC A4]
Length = 251
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 73/241 (30%)
Query: 16 NRSMEAHAYLSKKGVD--VKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQI 73
NRSMEAH LS V SFGTG S+V
Sbjct: 28 NRSMEAHLRLSTAASPFPVISFGTG--------SLV------------------------ 55
Query: 74 SVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLK 133
+ G ++ +PNVY+F++T+Y +Y +L++KD+ Y NG+L+ML+RN+ +K
Sbjct: 56 -------RLPGPSITQPNVYNFNSTSYSQMYDELLSKDERLYRNNGILNMLDRNRNVKWG 108
Query: 134 PEKFQE------------SKDK---------FDIIITCEERVYDQVLEHFDNQMISLENT 172
PE+FQ+ DK D+IITCEER +D V++ N+ +L N
Sbjct: 109 PERFQDWVPGMPRVDHVSKGDKGALGTEGGVVDVIITCEERCWDAVVDDLLNKGSTL-NR 167
Query: 173 PVHLINIDIQDNQEEATLGAFLASELMSMF----------IKCEDLDNEIDEIMQEFEEK 222
PVH+ N+DI+DN EEA +G EL + + +N E + F+EK
Sbjct: 168 PVHVFNVDIKDNHEEALVGGKAILELATRLNEVATQEQKALGSGGWENGTGEARRSFDEK 227
Query: 223 C 223
Sbjct: 228 V 228
>gi|429847680|gb|ELA23259.1| transcription rna-processing factor ssu72 [Colletotrichum
gloeosporioides Nara gc5]
Length = 253
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 61/237 (25%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSM +H L+ V SFGTG
Sbjct: 35 LKFCTVCASNQNRSMVSHLRLANANYPVISFGTGS------------------------- 69
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ I+++L +KD Y NG+L+M+
Sbjct: 70 --------------LVRLPGPSITQPNVYHFNKTSYDSIFKELESKDPRLYRLNGVLNMV 115
Query: 125 ERNKRIKLKPEKFQESKDK---------FDIIITCEERVYDQVLEHFDNQMISLENTPVH 175
+RN+ + + + Q ++D+ DI+ITCEER +D V++ N+ L N PVH
Sbjct: 116 DRNRHVGMP--RLQHTEDRGSVGTEGGVVDIVITCEERCWDAVIDDLMNRGSPL-NRPVH 172
Query: 176 LINIDIQDNQEEATLGAFLASELMSMF----------IKCEDLDNEIDEIMQEFEEK 222
+IN+DI+DN EEA++G +L + + E DN F+EK
Sbjct: 173 VINVDIKDNHEEASVGGKAILDLANHLNEAAKREREAVGAEVFDNGSASARASFDEK 229
>gi|335280137|ref|XP_003353509.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
A C-terminal domain phosphatase SSU72-like protein
1-like [Sus scrofa]
Length = 225
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 44/234 (18%)
Query: 2 PSNLKV-AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL 60
PS L + AVVC +NMNRSME + LS++G VKSF + S+V
Sbjct: 33 PSKLLILAVVCMNNMNRSMETRSILSQEGFHVKSF--------RGRSLV----------- 73
Query: 61 IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL 120
+ G + P Y+F +T Y ++ + + KD Y+ NG+
Sbjct: 74 --------------------KLPGPMPNHPAFYNF-STPYXEMRRHPLQKDXERYSSNGI 112
Query: 121 LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN-TPVHLINI 179
L++LERNKRIK PE+ Q+ + F +I TC E+V ++VL+ D E P+H+IN+
Sbjct: 113 LNILERNKRIKPCPERLQDCRCPFSVIFTCAEKVCNRVLK--DLYCRKQETFQPLHVINL 170
Query: 180 DIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
D +D E +LGA + EL + + + + E + E+K R LH + F
Sbjct: 171 DAEDTLEAISLGALIICELCQCLSRXDHVVGSLTEWLLAAEQKTGRRFLHAVCF 224
>gi|303389624|ref|XP_003073044.1| Ssu72-like protein [Encephalitozoon intestinalis ATCC 50506]
gi|303302188|gb|ADM11684.1| Ssu72-like protein [Encephalitozoon intestinalis ATCC 50506]
Length = 193
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 117/232 (50%), Gaps = 48/232 (20%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+K+AV C+ N NRSM+ H KKG+ +KSFGT S VI
Sbjct: 4 MKLAVSCAMNQNRSMQTHDLFMKKGIPIKSFGT---------SPVI-------------- 40
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G A+DKPNVY F T Y+ IY DL K++ +Y +G+L++L
Sbjct: 41 ----------------KLPGEAIDKPNVYSFDWT-YQKIYNDLCMKNEDYYRESGILYLL 83
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVH--LINIDIQ 182
ERN +K KPE F + + FD++ITCEERV+ + E++ + + H ++N DI+
Sbjct: 84 ERNMGVKEKPENFFQRCEDFDLVITCEERVFTSIFEYY----VDTPSCTKHFFMVNFDIK 139
Query: 183 DNQEEATLGAFLASELMS--MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTIL 232
D +A GA E + + ++ E L +D +++ E+ LL T++
Sbjct: 140 DTPSDAITGAQEILEFVEDVLSLEEEGLSYAVDLALKKHFERKGVMLLFTVV 191
>gi|310792310|gb|EFQ27837.1| Ssu72-like protein [Glomerella graminicola M1.001]
Length = 267
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 59/207 (28%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
LK VC+SN NRSM +H L+ V SFGTG S+V
Sbjct: 37 LKFCTVCASNQNRSMVSHLRLANANYPVISFGTG--------SLV--------------- 73
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++ +PNVY F+ T+Y+ I+++L +KD Y NG+L+M+
Sbjct: 74 ----------------RLPGPSITQPNVYHFNKTSYDSIFKELESKDPRLYRANGVLNMV 117
Query: 125 ERNKRIKLKPEKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQ 165
+RN+ +K PE++Q+ ++D+ DI++TCEER +D V++ N+
Sbjct: 118 DRNRHVKWGPERWQDWQIGMPRLNHTEDRGSVGVEGGVVDIVVTCEERCWDAVIDDLMNR 177
Query: 166 MISLENTPVHLINIDIQDNQEEATLGA 192
L N PVH+IN+DI+DN EEA++G
Sbjct: 178 GAPL-NRPVHVINVDIKDNHEEASVGG 203
>gi|452844323|gb|EME46257.1| hypothetical protein DOTSEDRAFT_70301 [Dothistroma septosporum
NZE10]
Length = 313
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 104/233 (44%), Gaps = 79/233 (33%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS---KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
LK VC+SN NRSMEAH L+ SFGTG S+V
Sbjct: 62 LKFCTVCASNNNRSMEAHLRLTTAPNGPYPTISFGTG--------SLV------------ 101
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
+ G ++ +PNVY+F++T+YE ++ +L KD Y NG+L
Sbjct: 102 -------------------RLPGPSISQPNVYNFNSTSYEAMHNELAGKDSRLYKANGIL 142
Query: 122 HMLERNKRIKLKPEKFQESK---------------------------DK---------FD 145
MLERNK +K PE++Q+ K DK D
Sbjct: 143 PMLERNKNVKWGPERWQDWKVGVPRVGKRWRTQDGTDQGRAEAEYKDDKGYQGTEAGTVD 202
Query: 146 IIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
I+ITCEER +D V++ + L N PVH+ N+DI+DN EEA +G EL
Sbjct: 203 IVITCEERCWDAVVDDLLTRGAPL-NRPVHVFNVDIKDNHEEALVGGRAILEL 254
>gi|308812782|ref|XP_003083698.1| Protein involved in transcription start site selection (ISS)
[Ostreococcus tauri]
gi|116055579|emb|CAL58247.1| Protein involved in transcription start site selection (ISS)
[Ostreococcus tauri]
Length = 205
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 48/239 (20%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S + A VC++N NRSMEAH L + G DVKS+G +
Sbjct: 8 SGYRYACVCAANFNRSMEAHRVLLENGFDVKSYGAASR---------------------- 45
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF---YTRNG 119
+ G + D PNVYDF T+YE+I +DL ++ + Y G
Sbjct: 46 -----------------VKLPGASRDDPNVYDFDGTSYEEILRDLRSQSEDLVKNYEERG 88
Query: 120 LLHMLERNKRIKLKPEKF---QESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHL 176
+ ML RN +IK PE++ +E + FD+I+ EERV+D V+ D + +
Sbjct: 89 MFDMLVRNAKIKRCPERWKTHRERGETFDVIVCFEERVFDLVV--MDLRAAGGARDAALV 146
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCED-LDNEIDEIMQEFEEKCSRPLLHTILFY 234
+N+D++D+ E + A A L +CE+ + EID I+ EFE + L+ + FY
Sbjct: 147 VNLDVRDSYEGSAEAAPRALRLCERLERCEEGWEGEIDSIVDEFEREEGLRALYCVCFY 205
>gi|406865336|gb|EKD18378.1| protein SSU72 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 287
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 41/193 (21%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE-- 139
+ G ++DKPNVY F+ T+Y+ +Y++L +KD Y NGLL+MLERN+ +K PE++Q+
Sbjct: 96 LPGPSIDKPNVYQFNKTSYDSMYKELESKDPRLYRANGLLNMLERNRNVKWGPERWQDWQ 155
Query: 140 --------SKDK---------FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
SKDK D++ITCEER +D V++ ++ L N PVH+IN+DI+
Sbjct: 156 VGAPRLEHSKDKGAEGVEGGVVDVVITCEERCWDAVIDDLMSRGSPL-NRPVHVINVDIK 214
Query: 183 DNQEEATLGAF----LASELMSMFIKCED----------------LDNEIDEIMQEFEEK 222
DN EEA +G LA L + I+ + D + EI+ ++E+
Sbjct: 215 DNHEEALVGGRGILDLADSLNEVAIEERERNPAGFDSGIAASRSGFDERVPEIIGAWQER 274
Query: 223 CSR-PLLHTILFY 234
P + T+ ++
Sbjct: 275 WPNLPAIWTLAWF 287
>gi|406606787|emb|CCH41823.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Wickerhamomyces ciferrii]
Length = 186
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 52/227 (22%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
M AH L + G V S+GTG S V
Sbjct: 1 MAAHKILKEHGYQVSSYGTG--------SAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++D+PNVY F T Y+ IY++L +D Y NG+L ML+RN++IK P+++
Sbjct: 24 --RLPGPSIDRPNVYPF-GTPYDKIYKELEAQDPKLYQANGILRMLDRNRKIKEAPQRWH 80
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
E ++ FD + TCEER +D V E ++ +L N VH+IN+DI+D+ + A G EL
Sbjct: 81 EGRETFDFVFTCEERCFDSVCEDLLHRGGNL-NKIVHVINVDIKDDDDNARSGGRGILEL 139
Query: 199 MSMFIKCEDL----------DNEIDEIMQEFEEKCSR-PLLHTILFY 234
K L +++I +I+ +++E S PLL+ LFY
Sbjct: 140 AESLAKASKLSKTHEDSVPFEDQILDILTKWQENHSNLPLLYAPLFY 186
>gi|346321743|gb|EGX91342.1| protein SSU72 [Cordyceps militaris CM01]
Length = 273
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 78/226 (34%)
Query: 5 LKVAVVCSSNMNR-------------------SMEAHAYLSKKGVDVKSFGTGDKKPQQW 45
LK VC+SN NR SMEAH LS+ V SFGTG
Sbjct: 24 LKFCTVCASNQNRYVASFLMPVCVLSHLTNPRSMEAHLRLSQANYPVISFGTG------- 76
Query: 46 ESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQ 105
S+V + G + +PNVY F+ T+Y+ +Y+
Sbjct: 77 -SLV-------------------------------RLPGPTITQPNVYQFNKTSYDSMYK 104
Query: 106 DLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE----------SKDK---------FDI 146
+L +KD Y NG+L+ML RN+ +K PE++Q+ + D+ DI
Sbjct: 105 ELDSKDSRLYKNNGILNMLSRNRGVKWGPERWQDWAIGVPRLKHTADRGSEGSEGGVVDI 164
Query: 147 IITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGA 192
+ TCEER +D V++ N+ L N PVH+IN++I+DN EEA +G
Sbjct: 165 VFTCEERCWDAVVDDLMNRGSPL-NRPVHVINVEIKDNHEEAHIGG 209
>gi|322694736|gb|EFY86558.1| protein SSU72 [Metarhizium acridum CQMa 102]
Length = 223
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 98/197 (49%), Gaps = 59/197 (29%)
Query: 15 MNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQIS 74
+ RSMEAH LS+ V SFGTG S+V
Sbjct: 3 IRRSMEAHLRLSQAEYPVISFGTG--------SLV------------------------- 29
Query: 75 VNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKP 134
+ G + +PNVY F+ T+Y+ +Y++L +KD Y NG+L+ML+RN+ +K P
Sbjct: 30 ------RLPGPTITQPNVYQFNKTSYDSMYKELESKDGRLYKANGILNMLDRNRGVKWGP 83
Query: 135 EKFQE----------SKDK---------FDIIITCEERVYDQVLEHFDNQMISLENTPVH 175
E++Q+ S DK D++ TCEER +D V++ ++ L N PVH
Sbjct: 84 ERWQDWAIGIPRLQHSTDKGSDGTEGGVVDVVFTCEERCWDAVIDDLLSRGSPL-NRPVH 142
Query: 176 LINIDIQDNQEEATLGA 192
+IN+DI+DN EEA +G
Sbjct: 143 VINVDIKDNHEEAHIGG 159
>gi|171687777|ref|XP_001908829.1| hypothetical protein [Podospora anserina S mat+]
gi|170943850|emb|CAP69502.1| unnamed protein product [Podospora anserina S mat+]
Length = 222
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 30/162 (18%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ--- 138
+ G + +PNVY F+ T+Y+ IY++L KD Y NGLL+ML RN+ IK PE++Q
Sbjct: 30 LPGPTITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNMLGRNRNIKWGPERWQDWQ 89
Query: 139 --------ESKDKF--------DIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
E+ F DI+ITCEER +D V++ N+ L N VH+INIDI+
Sbjct: 90 VGMPRVKKETDKGFEGMEGGVADIVITCEERCWDAVIDDLLNRGSPL-NRAVHVINIDIK 148
Query: 183 DNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCS 224
DN EEA++G +M DL + ++++ +E EK
Sbjct: 149 DNHEEASVGG------KAMV----DLADSLNQVAKEEREKVG 180
>gi|295663901|ref|XP_002792503.1| transcription/RNA-processing factor Ssu72 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279173|gb|EEH34739.1| transcription/RNA-processing factor Ssu72 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 282
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 116/275 (42%), Gaps = 95/275 (34%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSK--KGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH LS V SFGTG S+V
Sbjct: 58 LKFCTVCAANQNRSMEAHNRLSSPPSSYPVISFGTG--------SLV------------- 96
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G ++ +PNVY+F+T +Y I Y NG+L
Sbjct: 97 ------------------RLPGPSITQPNVYNFNTVSYAQI----------LYRNNGVLT 128
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEERVYDQVLEH 161
MLERNK +K PE+FQE DK D IITCEER +D V++
Sbjct: 129 MLERNKGVKWGPERFQEWVPGMPRLDHVSRGDKGSLGTEGGLVDAIITCEERCWDAVVDD 188
Query: 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCED-------------- 207
N+ L N PVH+ N+DI+D+ EEA +G+ +L D
Sbjct: 189 LMNRGAPL-NRPVHVFNVDIRDSHEEALVGSKAILDLADRLNSAADEEQKINGANGWDQA 247
Query: 208 -------LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
D ++ EI+ +++EK P L T+ ++
Sbjct: 248 TGEARRCFDEKVPEILAKWQEKWPNLPALWTLSWF 282
>gi|342878247|gb|EGU79602.1| hypothetical protein FOXB_09885 [Fusarium oxysporum Fo5176]
Length = 237
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 80/130 (61%), Gaps = 20/130 (15%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE-- 139
+ G + +PNVY F+ T+Y+ ++++L +KD Y NG+L+ML RN+ +K PE++Q+
Sbjct: 45 LPGPTITQPNVYHFNKTSYDSMFKELESKDARLYKNNGILNMLNRNRGVKWGPERWQDWQ 104
Query: 140 --------SKDK---------FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
+KD+ D++ITCEER +D V++ N+ + N PVH+IN++I+
Sbjct: 105 VGVPRLQHAKDRGSEGTEGGLVDVVITCEERCWDAVVDDLLNRGSPI-NRPVHVINVEIK 163
Query: 183 DNQEEATLGA 192
DN EEA +G
Sbjct: 164 DNHEEAAIGG 173
>gi|219121592|ref|XP_002181147.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407133|gb|EEC47070.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 172
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 46/211 (21%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L VVCSSN+NRSMEAH L G+ V+S+GTG +
Sbjct: 2 SKLSFGVVCSSNINRSMEAHVVLGNAGLQVESYGTGTQ---------------------- 39
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMN--KDKAFYTRNGL 120
V L + TAM+ P ++ F T YE++YQ + + +D A++ RNG+
Sbjct: 40 ------------VRLPGR----TAME-PRIFKF-GTPYEEMYQQMSSTAEDAAYFERNGV 81
Query: 121 LHMLERNKRIKLKPEKFQ----ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHL 176
L + R +K PE++Q E K D++I EER++D V+E + + + P+H+
Sbjct: 82 LQLCSRGAAVKRAPERWQDISSEDAAKHDVVIAFEERIFDAVIEDLQLREPTEDFRPIHV 141
Query: 177 INIDIQDNQEEATLGAFLASELMSMFIKCED 207
+ +D +DN EA +A L +C++
Sbjct: 142 VCLDTKDNPHEAARQGTVALRLCWQLEQCKE 172
>gi|430814512|emb|CCJ28266.1| unnamed protein product [Pneumocystis jirovecii]
Length = 163
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 102/216 (47%), Gaps = 55/216 (25%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
MEAH L G +V+SFGT S V
Sbjct: 1 MEAHCVLKNAGYNVRSFGT--------SSAV----------------------------- 23
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
+ G ++DKPN+Y F T Y+ IY +L KD YT NGLL++ +Q
Sbjct: 24 --RLPGPSIDKPNIYPF-GTPYDQIYNELKTKDIKLYTANGLLNI-------------WQ 67
Query: 139 ESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
+++D FDI+ITCEER +D V E N+ L N VH+INIDI+DN EEA +G +L
Sbjct: 68 DNRDLFDIVITCEERCFDTVCEDLINRG-ELMNRIVHVINIDIKDNHEEAVIGGQAILKL 126
Query: 199 MSMFIKCEDLDNEIDEIMQEFEEKCSR-PLLHTILF 233
+ +D++I I +++ + LLH++ +
Sbjct: 127 IDALSSSNAIDDDIYNIFSAWQKDHPKLSLLHSVHY 162
>gi|254567089|ref|XP_002490655.1| Transcription/RNA-processing factor [Komagataella pastoris GS115]
gi|238030451|emb|CAY68375.1| Transcription/RNA-processing factor [Komagataella pastoris GS115]
Length = 231
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 53/201 (26%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L VC+SN NRSMEAH L G V+S+GTG S V
Sbjct: 5 LSFCTVCASNQNRSMEAHKLLKDAGYKVRSYGTG--------SAV--------------- 41
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++DKPNV+ F T Y + + LM +D + NG+L M+
Sbjct: 42 ----------------RLPGPSIDKPNVFQF-GTPYSTMREQLMKQDVRLHQANGVLKMI 84
Query: 125 ERNKRIKLKPEKF----QESKDK----FDIIITCEERVYDQVLEHFDNQMIS-----LEN 171
+RN++IK P+++ QE + FDI+ TCEER +D V+E F N+ + +
Sbjct: 85 DRNEKIKEAPQRWPYIGQEPQTTEGLDFDIVFTCEERCFDAVVEDFMNRSYNDTSSQINR 144
Query: 172 TPVHLINIDIQDNQEEATLGA 192
+H+IN++I+D+ + A +G
Sbjct: 145 KLIHVINVEIRDDYDNALIGG 165
>gi|328351041|emb|CCA37441.1| autophagy-related protein 4 [Komagataella pastoris CBS 7435]
Length = 758
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 53/201 (26%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
L VC+SN NRSMEAH L G V+S+GTG S V
Sbjct: 532 LSFCTVCASNQNRSMEAHKLLKDAGYKVRSYGTG--------SAV--------------- 568
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
+ G ++DKPNV+ F T Y + + LM +D + NG+L M+
Sbjct: 569 ----------------RLPGPSIDKPNVFQF-GTPYSTMREQLMKQDVRLHQANGVLKMI 611
Query: 125 ERNKRIKLKPEKF----QESKDK----FDIIITCEERVYDQVLEHFDNQMIS-----LEN 171
+RN++IK P+++ QE + FDI+ TCEER +D V+E F N+ + +
Sbjct: 612 DRNEKIKEAPQRWPYIGQEPQTTEGLDFDIVFTCEERCFDAVVEDFMNRSYNDTSSQINR 671
Query: 172 TPVHLINIDIQDNQEEATLGA 192
+H+IN++I+D+ + A +G
Sbjct: 672 KLIHVINVEIRDDYDNALIGG 692
>gi|325185432|emb|CCA19916.1| RNA polymerase II subunit A Cterminal domain phosphatase putative
[Albugo laibachii Nc14]
Length = 197
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 44/230 (19%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A++C++N+NRS EAH +L G+ V SFG G+K
Sbjct: 7 AMLCANNVNRSTEAHDHLHAAGLRVCSFGAGNKV-------------------------- 40
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
G + +P ++DF T Y+ +Y L +++ + RNG+L ML+R+
Sbjct: 41 -------------RFPGPSRYEPRIFDFFTP-YQVMYHQLKEENEELFRRNGVLDMLKRD 86
Query: 128 KRIKLKPEKFQESK----DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
K P+++Q+ K D+I+ ++R+++ VLE ++ + P+HLI +D +D
Sbjct: 87 MSTKTCPQRWQDLSVKEIQKLDVIVCFDDRIFEIVLEDLQLRLGVGDWHPIHLICLDTKD 146
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILF 233
E+A +G LA EL +L++++ ++ FE+ LL+++L+
Sbjct: 147 TPEQAKIGGLLALELCQAIDALSELEDDVVREIRRFEKARDVRLLYSLLY 196
>gi|388495086|gb|AFK35609.1| unknown [Lotus japonicus]
Length = 133
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 106 DLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE--SKDKFDIIITCEERVYDQVLEHFD 163
DL KD Y RNG+L ML+RN +KL P+++QE + FDI+ EE+V+D V+E
Sbjct: 4 DLRRKDPELYKRNGILPMLKRNSNVKLAPQRWQENAADGSFDIVFAFEEKVFDMVIEDLH 63
Query: 164 NQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKC 223
N+ L T V +IN++++DN EEA +GA L +L E + ID+I+ FE++
Sbjct: 64 NRDHVLLKT-VLVINLEVKDNHEEAAVGARLTLDLCQEIEAAESWEESIDDIIGGFEKQH 122
Query: 224 SRPLLHTILFY 234
R LL++I FY
Sbjct: 123 RRKLLYSISFY 133
>gi|67484762|ref|XP_657601.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56474860|gb|EAL52214.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|407034063|gb|EKE37035.1| Ssu72 family protein [Entamoeba nuttalli P19]
gi|449704439|gb|EMD44680.1| RNA polymerase II subunit A Cterminal domain phosphatase SSU72
[Entamoeba histolytica KU27]
Length = 201
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 47/231 (20%)
Query: 7 VAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFH 66
+AV+C SN NRS+ AH L + G +V SFGTG ++P
Sbjct: 15 IAVICRSNQNRSISAHCRLKQLGYNVSSFGTG------------------VYTILP-GAT 55
Query: 67 KVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKA---FYTRNGLLHM 123
+ F FQ + Y+DI ++ + KD+A +Y +N + M
Sbjct: 56 RNFGFQFGI-----------------------PYKDI-KNSLPKDEASVEYYRKNKIYQM 91
Query: 124 LERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
L+RN +K PEKFQ+ K +F+IIIT + V+ VLE+FD++ S + ++ N+ + D
Sbjct: 92 LDRNANLKSAPEKFQDCKKEFNIIITLDYSVFMDVLEYFDSRE-SSTGSLCYVFNLTVMD 150
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ A GA SE + + D N ID +++ F K +LH++ Y
Sbjct: 151 QLDTAEKGAIEVSEFLKLMESDSDWMNNIDHVIKSFYSKTKINVLHSMQMY 201
>gi|258576003|ref|XP_002542183.1| hypothetical protein UREG_01699 [Uncinocarpus reesii 1704]
gi|237902449|gb|EEP76850.1| hypothetical protein UREG_01699 [Uncinocarpus reesii 1704]
Length = 269
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 44/183 (24%)
Query: 95 FHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE------------SKD 142
F+T +Y IY +L KD Y NG+L ML+RN+ +K PE+FQE D
Sbjct: 88 FNTVSYSQIYDELQTKDPRLYRNNGVLPMLDRNRSVKWGPERFQEWTPGLPRLDHVSRGD 147
Query: 143 K---------FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAF 193
K D+IITCEE+ +D V++ N+ L N PVH+ N+DI+DN EEA +G+
Sbjct: 148 KGSLGTEGGIVDVIITCEEKCWDAVVDDLMNRGAPL-NRPVHVFNVDIRDNHEEALVGSK 206
Query: 194 LASELMSMFIKCED---------------------LDNEIDEIMQEFEEKCSR-PLLHTI 231
+L + D D ++ EI+ +++EK P L T+
Sbjct: 207 AILDLADRLNEAADQERKMNGVDGWDQGGGAARRGFDEKVPEILAKWQEKWPNLPALWTL 266
Query: 232 LFY 234
++
Sbjct: 267 SWF 269
>gi|301115824|ref|XP_002905641.1| RNA polymerase II subunit A C-terminal domain phosphatase, putative
[Phytophthora infestans T30-4]
gi|262110430|gb|EEY68482.1| RNA polymerase II subunit A C-terminal domain phosphatase, putative
[Phytophthora infestans T30-4]
Length = 201
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 52/237 (21%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A++C++N+NRS EAH +L G+ V SFG G++ V F
Sbjct: 3 AMLCANNVNRSTEAHDHLHAAGLRVCSFGAGNR--------VRF---------------- 38
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
G + D P +Y+F T YE +Y++L ++ + RNG+L MLER+
Sbjct: 39 ---------------PGPSRDDPRIYEFFTP-YETMYRELKAENAELFKRNGVLSMLERD 82
Query: 128 KRIKLKPEKFQESKDK----FDIIITCEERVYDQVLEHFD--------NQMISLENTPVH 175
K P+++Q+ K D+++ ++R+++ VLE +++ P+H
Sbjct: 83 MLTKKCPQRWQDLSVKELQGLDVVLCFDDRIFEIVLEDLQLRGAAQPTGSELTMAWRPLH 142
Query: 176 LINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTIL 232
L+ +D +D E A +G LA EL L++ I + +Q+FE + + LL+++L
Sbjct: 143 LLCLDTKDTPEHAKVGGSLALELCQAIDVLNSLNDGIIDAIQDFESRKNVHLLYSLL 199
>gi|167390047|ref|XP_001739187.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Entamoeba dispar SAW760]
gi|165897210|gb|EDR24438.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72,
putative [Entamoeba dispar SAW760]
Length = 201
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 47/231 (20%)
Query: 7 VAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFH 66
+AV+C SN NRS+ AH L + G +V SFGTG ++P
Sbjct: 15 IAVICRSNQNRSISAHCRLKQLGYNVSSFGTG------------------VYTILP-GAT 55
Query: 67 KVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKA---FYTRNGLLHM 123
+ F FQ + Y+DI ++ + KD+ +Y +N + M
Sbjct: 56 RNFGFQFGI-----------------------PYKDI-KNSLPKDEVSVEYYRKNKIYQM 91
Query: 124 LERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
L+RN +K PEKFQ+ K +F+IIIT + V+ VLE+FD++ S + ++ N+ + D
Sbjct: 92 LDRNANLKSAPEKFQDCKKEFNIIITLDYSVFMDVLEYFDSRE-SSTGSLCYVFNLTVMD 150
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ A GA SE + + D N ID +++ F K +LH++ Y
Sbjct: 151 QLDTAEKGAIEVSEFLKLMESDSDWMNNIDHVIKSFYSKTKINVLHSMQIY 201
>gi|224003849|ref|XP_002291596.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973372|gb|EED91703.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 948
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDL--MNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE 139
+ G + +P ++ F T Y ++Y + +D+AF+ NG+L + +R +KL P+++Q+
Sbjct: 14 LPGKSSMEPRIFKF-GTPYSEMYASMSATPEDEAFFVHNGVLQLCKRGSSVKLAPQRWQD 72
Query: 140 SKDK----FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLA 195
+ K D++I EER+YD V+E + + + +H+I +D +DN EA L +A
Sbjct: 73 TPSKAIQTHDVVIAFEERIYDAVVEDLQTREPTEDFKAIHVICLDTKDNPHEAKLQGRVA 132
Query: 196 SELMSMFIKCEDLDNEIDEIMQEFEEK 222
EL + + EDLD E E+++ F+++
Sbjct: 133 LELCWLLEQTEDLDAEAAELVERFQDE 159
>gi|300708720|ref|XP_002996534.1| hypothetical protein NCER_100374 [Nosema ceranae BRL01]
gi|239605843|gb|EEQ82863.1| hypothetical protein NCER_100374 [Nosema ceranae BRL01]
Length = 188
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 45/190 (23%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
+K+AV C+ N NRSMEAH L G + S+GT H
Sbjct: 1 MKIAVCCAMNQNRSMEAHKILKDAGYKIDSYGTNQ------------HI----------- 37
Query: 65 FHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHML 124
I G +++ PN+Y F T+Y++IY+DL+ K+ +FY + G+L ML
Sbjct: 38 ----------------KIPGESLETPNIYQF-GTSYKEIYKDLIYKNASFYEKIGILKML 80
Query: 125 ERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQD 183
ERN IK E F D+IIT EE+ + + E+ M+ + ++N DI+D
Sbjct: 81 ERNMAIKDSAEYFFNKDTYHDLIITSEEKCFVTIYEN----MVKCNGSYKSFIVNFDIKD 136
Query: 184 NQEEATLGAF 193
+A+ GA
Sbjct: 137 TILDASAGAL 146
>gi|320035111|gb|EFW17053.1| transcription/RNA-processing factor Ssu72 [Coccidioides posadasii
str. Silveira]
Length = 271
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 106/261 (40%), Gaps = 85/261 (32%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLS--KKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
LK VC++N NRSMEAH L+ V SFGTG S+V
Sbjct: 65 LKFCTVCAANQNRSMEAHNRLAAPPSSYPVISFGTG--------SLV------------- 103
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G + +PNVY+F+T +Y IY +L +KD Y NG+L
Sbjct: 104 ------------------RLPGPTITQPNVYNFNTVSYSQIYDELQSKDPRLYRNNGVLP 145
Query: 123 MLERNKRIKLKPEKFQE------------SKDK---------FDIIITCEER-------V 154
ML+RN+ +K PE+FQE DK D+IITCEE+ +
Sbjct: 146 MLDRNRSVKWGPERFQEWLPGMPRLDHVSRGDKGSLGTEGGIVDVIITCEEKDNHEEALI 205
Query: 155 YDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDE 214
+ + +++ + + ID D A F D ++ E
Sbjct: 206 GSKAILDLADRLNESADQERKINGIDGWDQGGGAARKGF---------------DEKVPE 250
Query: 215 IMQEFEEKCSR-PLLHTILFY 234
I+ +++EK P L T+ ++
Sbjct: 251 ILAKWQEKWPNLPALWTLSWF 271
>gi|444519378|gb|ELV12798.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 114
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 173 PVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTIL 232
PVH++N+DIQDN EEATLGAFL EL ED++NEIDE++QEFEEK R LHT+
Sbjct: 53 PVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVC 112
Query: 233 FY 234
FY
Sbjct: 113 FY 114
>gi|359477895|ref|XP_002269043.2| PREDICTED: uncharacterized protein LOC100245320 [Vitis vinifera]
Length = 376
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 42/155 (27%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A+VC SN NRSMEAH+ L K+G +V S+ TG
Sbjct: 261 AMVCLSNQNRSMEAHSLLKKQGFNVSSYRTG----------------------------- 291
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
+ + L G ++ +PN+Y+F T Y+ ++ DL K+ + Y RNG+L ML+RN
Sbjct: 292 -----VHIKL-----PGPSLREPNIYEFETP-YKHMFDDLCCKNPSLYKRNGILPMLKRN 340
Query: 128 KRIKLKPEKFQESK--DKFDIIITCEERVYDQVLE 160
+K P+ +Q++ + FD++ T EE+V+D V+E
Sbjct: 341 LSVKTSPQHWQDNATYEPFDLVFTFEEKVFDMVVE 375
>gi|209734570|gb|ACI68154.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
Length = 103
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 61/123 (49%), Gaps = 41/123 (33%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 1 MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSH------------------- 41
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNG 119
+ G A DKPNVYDF TTYE +Y DL+ KDK Y +
Sbjct: 42 --------------------VKLPGPAPDKPNVYDF-KTTYEQMYNDLVRKDKELYPLHT 80
Query: 120 LLH 122
+H
Sbjct: 81 CIH 83
>gi|402576089|gb|EJW70048.1| hypothetical protein WUBG_19045, partial [Wuchereria bancrofti]
Length = 80
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQ 182
ML+RN+RIK P+KFQ KFD+II EERVYDQ++E + + E VH+INIDIQ
Sbjct: 1 MLDRNRRIKDMPQKFQHFSGKFDVIICLEERVYDQIVEDLQTRDTN-EGDSVHVINIDIQ 59
Query: 183 DNQEEATLGAFLASELMSMF 202
DN EEAT+GA +L F
Sbjct: 60 DNHEEATIGALFVYDLCLRF 79
>gi|358421162|ref|XP_001255435.4| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like, partial [Bos
taurus]
gi|359073272|ref|XP_002693489.2| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog, partial
[Bos taurus]
Length = 102
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 133 KPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATL 190
+PE+ QE + +FD+I TC E VYD+V+E + + T PVH+IN+D+ DN ++ATL
Sbjct: 2 RPERLQECRGRFDVIFTCVESVYDRVVEEL---WVREQETFQPVHVINVDMADNAKDATL 58
Query: 191 GAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
G+F+ EL + +L++ + +++ E K + LHT+ FY
Sbjct: 59 GSFIICELCERLQQAGNLEDSLVQVLLAAERKTGKSFLHTVCFY 102
>gi|350588220|ref|XP_003482602.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like, partial [Sus scrofa]
Length = 98
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 7/102 (6%)
Query: 136 KFQESKDKFDIIITCEERVYDQVLEHFDNQMISLEN---TPVHLINIDIQDNQEEATLGA 192
+FQ+ ++ FD+I TCEE +YD+V+ H + + E PVH+IN+D+QDN E+ TLG+
Sbjct: 1 RFQDCREAFDVIFTCEESIYDRVVGH----LCAREQETCQPVHVINVDMQDNLEDTTLGS 56
Query: 193 FLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ EL + +D++N + +++ E+K R LHT+ FY
Sbjct: 57 LVLCELCQRLQQVDDMENCLAKLLLGVEQKTGRSFLHTVCFY 98
>gi|348683711|gb|EGZ23526.1| hypothetical protein PHYSODRAFT_353833 [Phytophthora sojae]
Length = 177
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 55/206 (26%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A++C++N+NRS EAH +L G+ V SFG G++ V F
Sbjct: 9 AMLCANNVNRSTEAHDHLHAAGLRVCSFGAGNR--------VRF---------------- 44
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
G + D P +Y+F T YE +Y++L ++ + RNG+L MLER+
Sbjct: 45 ---------------PGPSRDDPRIYEFFTP-YETMYRELKAENAELFKRNGVLSMLERD 88
Query: 128 KRIKLKPEKFQESKDK----FDIIITCEERVYDQVLEHFDNQMI-----------SLENT 172
K P+++Q+ K D+++ ++R+++ VLE + +
Sbjct: 89 MLTKKCPQRWQDLSVKELQGLDVVLCFDDRIFEIVLEDLQLRGAAGGPGGPGNEPTTAWR 148
Query: 173 PVHLINIDIQDNQEEATLGAFLASEL 198
P+HL+ +D +D E A +G LA EL
Sbjct: 149 PLHLLCLDTKDTPEHAKVGGSLALEL 174
>gi|296479856|tpg|DAA21971.1| TPA: Ssu72 RNA polymerase II CTD phosphatase homolog [Bos taurus]
Length = 105
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 134 PEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATLG 191
PE+ QE + +FD+I TC E VYD+V+E + + T PVH+IN+D+ DN ++ATLG
Sbjct: 6 PERLQECRGRFDVIFTCVESVYDRVVEEL---WVREQETFQPVHVINVDMADNAKDATLG 62
Query: 192 AFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+F+ EL + +L++ + +++ E K + LHT+ FY
Sbjct: 63 SFIICELCERLQQAGNLEDSLVQVLLAAERKTGKSFLHTVCFY 105
>gi|170044255|ref|XP_001849769.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Culex quinquefasciatus]
gi|167867480|gb|EDS30863.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Culex quinquefasciatus]
Length = 77
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 57/110 (51%), Gaps = 40/110 (36%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S L VAV+CSSNMNRSMEAH +L+KK V+SFGTGDK
Sbjct: 7 SPLSVAVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDK---------------------- 44
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDK 112
+ GTA DKPNVY+F T+Y+DI+ DL NKDK
Sbjct: 45 -----------------VKLPGTAADKPNVYEF-GTSYDDIFSDLANKDK 76
>gi|440295361|gb|ELP88274.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72,
putative [Entamoeba invadens IP1]
Length = 199
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 47/231 (20%)
Query: 7 VAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFH 66
+AVVC SN NRS AH L + G +V SFGTG ++P
Sbjct: 13 IAVVCRSNQNRSTCAHRRLKQLGYNVSSFGTGQ------------------YTILPGPVR 54
Query: 67 KVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKA---FYTRNGLLHM 123
F FQ T Y+DI + +++KD+ F+ ++ + M
Sbjct: 55 N-FRFQFG-----------------------TPYKDI-KTMLSKDEMHIDFFKKHKIFQM 89
Query: 124 LERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQD 183
L++N +K PE+FQE+K +F I+I+ + +V+ +LE+FD + + ++ N+++ D
Sbjct: 90 LDKNAILKSAPERFQETKKEFAIVISLDYQVFMDLLEYFDTRQQQTGDL-CYVFNMNVVD 148
Query: 184 NQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ A GA SE + + D + ID I++ F K ++H++ Y
Sbjct: 149 QFDAAENGAMEVSEFLKLLENDVDWMSNIDRIIRTFYNKTRLNVMHSLQIY 199
>gi|359476444|ref|XP_003631840.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase SSU72-like [Vitis
vinifera]
Length = 115
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 42/154 (27%)
Query: 9 VVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKV 68
+V SSN N SMEAH+ L K+G +V S+GTG
Sbjct: 1 MVSSSNQNXSMEAHSLLKKQGFNVSSYGTG------------------------------ 30
Query: 69 FVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
+ V L ++ +PN+Y+F T Y+ ++ DL KD Y RNG+L ML+RN
Sbjct: 31 ----VHVKL-----PKPSLREPNIYEF-GTLYKHMFNDLSYKDPDLYKRNGILPMLKRNS 80
Query: 129 RIKLKPEKFQE--SKDKFDIIITCEERVYDQVLE 160
+K P++ Q+ + FD++ T E++V+D V+E
Sbjct: 81 LVKTTPQRXQDNATDGPFDVVFTFEKKVFDMVVE 114
>gi|300123212|emb|CBK24485.2| unnamed protein product [Blastocystis hominis]
Length = 171
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 43/196 (21%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A +CSSN+NRSMEAH+ K + V S+GTG K
Sbjct: 9 ATICSSNVNRSMEAHSLFKKNHLRVCSYGTGRK--------------------------- 41
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
I G + KP Y F T YE I DL+ +K F+T ++ M++R+
Sbjct: 42 ------------IKIPGLSEKKPLEYGF-GTEYETILNDLIELNKDFFTEREIIPMIQRD 88
Query: 128 KRIKLKPEKFQESKDK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQ 185
K +K P++FQ+ D D+ I +E V+D V+E + S + P+ + NI ++D
Sbjct: 89 KGVKKAPQRFQDEFDLSFIDVCICFDEHVFDSVVEELQFRGCS-KIKPIFVFNIHVKDRV 147
Query: 186 EEATLGAFLASELMSM 201
A GA A L M
Sbjct: 148 STAREGAKHALRLAEM 163
>gi|10434881|dbj|BAB14410.1| unnamed protein product [Homo sapiens]
gi|119576586|gb|EAW56182.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|158256084|dbj|BAF84013.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 57/116 (49%), Gaps = 41/116 (35%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSE 59
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGT-------------------- 40
Query: 60 LIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFY 115
+ G A DKPNVYDF TTY+ +Y DL+ KDK Y
Sbjct: 41 -------------------HVKLPGPAPDKPNVYDFK-TTYDQMYNDLLRKDKELY 76
>gi|361130392|gb|EHL02205.1| putative RNA polymerase II subunit A C-terminal domain phosphatase
SSU72 [Glarea lozoyensis 74030]
Length = 209
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 41/172 (23%)
Query: 103 IYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQE----------SKDKFD------- 145
+Y++L +KD Y NG+L+ML RN+ +K PE++Q+ +KD+
Sbjct: 39 MYKELESKDARLYRANGILNMLGRNRDVKWGPERWQDWRVGIPRLEHAKDQGSEGVEGGV 98
Query: 146 --IIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFI 203
++ITCEER +D V++ N+ L N PVH+IN+DI+DN EEA +G +L
Sbjct: 99 VDVVITCEERCWDAVIDDLLNRGSPL-NRPVHVINVDIKDNHEEALVGGRGILDLADSLN 157
Query: 204 KCE--------------------DLDNEIDEIMQEFEEKCSR-PLLHTILFY 234
K D + EI+ E++E+ P + T+ ++
Sbjct: 158 KAAAEERKLNPVGFDSGSASSRSSFDERVPEIIGEWQERWPNLPAVWTLAWF 209
>gi|402577345|gb|EJW71302.1| hypothetical protein WUBG_17791, partial [Wuchereria bancrofti]
Length = 77
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 170 ENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRP-LL 228
E VH+INIDIQDN EEAT+GA +L + CEDLDNEIDE++ EFE+ SR +L
Sbjct: 12 EGDSVHVINIDIQDNHEEATIGALFVCDLCAKLEACEDLDNEIDEVLTEFEQNNSRRNIL 71
Query: 229 HTILFY 234
HTI FY
Sbjct: 72 HTICFY 77
>gi|358421164|ref|XP_001255447.4| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog, partial
[Bos taurus]
Length = 102
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 133 KPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATL 190
+ E+ QE +D F++I TC E VYD+V+E + + T PVH+IN+D+ DN E+ATL
Sbjct: 2 RLERLQECRDHFEVIFTCVESVYDRVVEEL---WVREQETFQPVHVINVDMADNAEDATL 58
Query: 191 GAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
G+ + EL + +L++ + +++ E K + LHT+ FY
Sbjct: 59 GSLIICELCERLQQAGNLEDSLVQVLLAAERKTGKSFLHTVCFY 102
>gi|320583628|gb|EFW97841.1| Transcription/RNA-processing factor [Ogataea parapolymorpha DL-1]
Length = 207
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 71/247 (28%)
Query: 19 MEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLF 78
MEAH L G V+S+GTG SV L
Sbjct: 1 MEAHKVLKDAGYTVRSYGTG----------------------------------TSVRL- 25
Query: 79 FQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQ 138
G +D+PNV++F T Y I + L +D + NG+L M +RN IK PE++
Sbjct: 26 ----PGPTIDQPNVFEF-GTPYTKILEKLNTQDLKIHKANGVLDMTKRNIGIKKAPERWP 80
Query: 139 -----------------ESKDKFDIIITCEERVYDQVLEHFDNQMI---SLENTPVHLIN 178
E++ F ++ITCEER +D V+E F ++ S PVH N
Sbjct: 81 YYNQPPQRLPPSEYPEFENELDFQVVITCEERCFDSVVEDFFSRNYFEPSQTQQPVHCFN 140
Query: 179 IDIQDNQEEATLGAFLASELMSMF----------IKCEDLDNEIDEIMQEFEEKCS-RPL 227
++I+D + A GA +L M +++I +I+ E+++ P+
Sbjct: 141 VEIRDEHKSALAGAQAILDLARMLSDAHAKSLEDFSAPPFEDKIPDIITEWQQNHPVTPV 200
Query: 228 LHTILFY 234
L+ + ++
Sbjct: 201 LYALCYH 207
>gi|123412506|ref|XP_001304075.1| SSU72 protein-related protein [Trichomonas vaginalis G3]
gi|121885502|gb|EAX91145.1| SSU72 protein-related protein [Trichomonas vaginalis G3]
Length = 204
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 59/238 (24%)
Query: 1 MPSN--LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGD--KKPQQWESVVIFHCCDF 56
M SN L A VC+SN+NRSME H L + G +V S+GT D K P
Sbjct: 1 MTSNNQLAFACVCASNVNRSMEGHRVLKEAGFNVSSYGTNDYVKMP-------------- 46
Query: 57 CSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYT 116
+ +PL F DF T Y++I + +++ +Y
Sbjct: 47 GASNVPLQF----------------------------DFGAT-YKEILSKMESENNQYYE 77
Query: 117 RNGLLHMLERNKRIKLKPEKFQESKDK-----FDIIITCEERVYDQVLEHF---DNQMIS 168
GL+ ML + K KPE++ + + FD+I T + V D+VL F N+
Sbjct: 78 EQGLIKMLRDDANTKEKPERWSSTFNPATLKYFDVIFTYDNNVMDRVLNEFRENGNRTFQ 137
Query: 169 LENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRP 226
+ H++NI D+++ A L L M DL ++ I+ +F + P
Sbjct: 138 IS----HVVNIQTPDSRDNAILSRQYTLRLAQMLSAATDLTENLESIVDQFNMENGNP 191
>gi|348689637|gb|EGZ29451.1| hypothetical protein PHYSODRAFT_249278 [Phytophthora sojae]
Length = 242
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 64/236 (27%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELI 61
P A+VC++N+NRS AH LS G+ V S+G G + V F
Sbjct: 30 PRRPMFAMVCANNVNRSAAAHESLSAAGLRVCSYGAGRQ--------VTF---------- 71
Query: 62 PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLL 121
G + F T Y D++ L +D A ++ NG+L
Sbjct: 72 ---------------------PGKTSSDARTFKF-LTPYADMHSILEKEDAALFSGNGVL 109
Query: 122 HMLERNKRIKLKPEKFQESKDK----FDIIITCEERVYDQVLEH-----------FDNQM 166
+LER+ IK PE++Q +K D+++ + ++ VLE D QM
Sbjct: 110 QILERDMPIKKAPERWQSLSNKQLLDIDVVVCLDYVMFLTVLEGGLADLSWLCVFADIQM 169
Query: 167 ---ISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEF 219
+S + +H+I +D +D EEA G +L C +L+ DE+ +E
Sbjct: 170 RIRLSFKTKQLHIICLDTEDTPEEALTGGARVLDL------CRELNVPSDELTEEL 219
>gi|299117229|emb|CBN75191.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 230
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 44/162 (27%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
S + AVVCS+N NRSM AH L + V+S+GTG +
Sbjct: 102 SKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGRE---------------------- 139
Query: 63 LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLH 122
+ G + P V+ F T Y DI+ L KD+A +++N LL
Sbjct: 140 -----------------VRLPGKDIASPEVFPF-GTPYRDIFDKLKAKDEALFSQNNLLP 181
Query: 123 MLERNKRIKLKPEKFQESKDK----FDIIITCEERVYDQVLE 160
++ RN +K P++FQE + FD+++ E RV+ V+E
Sbjct: 182 LVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVE 223
>gi|301105268|ref|XP_002901718.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100722|gb|EEY58774.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 275
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 57/212 (26%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
A+VC +N+N S AH LS G+ V S+G G + V F
Sbjct: 13 AMVCVNNVNLSAAAHESLSSAGMRVYSYGAGRR--------VTF---------------- 48
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
G + + + F T Y ++ L +D A +T NG+L +L+R+
Sbjct: 49 ---------------PGKTISEARTFKF-LTPYATMHSILEKEDAALFTGNGVLQILKRD 92
Query: 128 KRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEE 187
+ +K PE++Q +K I I R+ +S + +H+I +D D +E
Sbjct: 93 RPLKTAPERWQSLSNKQLISIGVVMRIR-----------LSFKTKQLHIICLDTVDTPQE 141
Query: 188 ATLGAFLASELMSMFIKCEDLDNEIDEIMQEF 219
A G +L C +L+ +DE+ + F
Sbjct: 142 ALTGGERVLKL------CRELNVPVDELTEGF 167
>gi|402468085|gb|EJW03286.1| hypothetical protein EDEG_02352 [Edhazardia aedis USNM 41457]
Length = 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 60/247 (24%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFF 65
++A+ C+ N NRSME H L + + KSFGT +SVV D
Sbjct: 3 RIAICCAMNQNRSMEVHRLLLENNIKCKSFGT--------QSVVRLPSPDAL-------- 46
Query: 66 HKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLE 125
K N Y + T + DI +DL +K +Y + GL+ M++
Sbjct: 47 -----------------------KANTYKYDNT-FADIKKDLESKHDVWYEQTGLIDMVD 82
Query: 126 RNKRIKLKPE---KFQESKDK-----FDIIITCEERVYDQVLEHFDNQMISL-------- 169
+N + K KPE ++ ES +K FD+I++C++R Y+ ++E+ + +
Sbjct: 83 KNIKTKEKPENIFQYAESMNKNLIELFDLIVSCDKRCYNALIEYAEYEEEERKKIKKIVS 142
Query: 170 ENTPVHLINIDIQDNQEEATLGAFLASELMS-MFIKCE---DLDNEIDEIMQEFEEKCSR 225
++ ++N I+D+ +A A + + +F + E DN + ++ +F ++ +
Sbjct: 143 RDSHCWVVNFHIKDSIADAQSAANSVVDFVKRIFRRTEAGISYDNAVKRVITDFSQEMNE 202
Query: 226 PLLHTIL 232
+L +L
Sbjct: 203 DMLFKVL 209
>gi|299473591|emb|CBN77986.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 410
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 44/166 (26%)
Query: 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHK 67
AVVCSSN+NRS+ A L + + +S+GTG +
Sbjct: 145 AVVCSSNVNRSIMAEILLKEHDIRAQSYGTGRE--------------------------- 177
Query: 68 VFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERN 127
+ G P + F T Y +I L +++A + RN +L +LERN
Sbjct: 178 ------------VRLPGKDSKSPQSFPF-GTPYVEIRDFLARQNEALFRRNSVLGLLERN 224
Query: 128 KRIKLKPEKFQ----ESKDKFDIIITCEERVYDQVLEHFDNQMISL 169
K PE++Q E FD+++ E RV+D V+E + SL
Sbjct: 225 ATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEGILTFLCSL 270
>gi|397570222|gb|EJK47197.1| hypothetical protein THAOC_34103, partial [Thalassiosira oceanica]
Length = 240
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 131 KLKPEKFQESK----DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQE 186
KL P+++Q++ + D++I EER+YD V+E + + + +H+I +D +DN
Sbjct: 129 KLAPQRWQDTSTPAVQEHDVVIAFEERIYDAVIEDLQMREPTEDFKAIHVICLDTKDNPH 188
Query: 187 EATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEK 222
EA L +A EL + + +DLD+E E++++F+E+
Sbjct: 189 EAQLQGKVALELCWILEQTQDLDSEAPELIEQFQEQ 224
>gi|290985379|ref|XP_002675403.1| predicted protein [Naegleria gruberi]
gi|284088999|gb|EFC42659.1| predicted protein [Naegleria gruberi]
Length = 167
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 41/109 (37%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKK-GVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPL 63
+ AVVC+SN NRSM AH L KK ++V SFGTG
Sbjct: 98 ISFAVVCASNQNRSMSAHYLLQKKYRMNVSSFGTGS------------------------ 133
Query: 64 FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDK 112
SV L G + D PN+YDF T+Y+DI+ DL ++D+
Sbjct: 134 ----------SVKL-----PGKSRDSPNIYDF-GTSYQDIFNDLKSQDE 166
>gi|444731467|gb|ELW71820.1| Olfactory receptor 52B4 [Tupaia chinensis]
Length = 368
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 173 PVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEID 213
PVH+IN+DI+D QEEATLGAFL EL + ED+++ +
Sbjct: 14 PVHVINVDIKDTQEEATLGAFLICELFQCLQRTEDMEDSVG 54
>gi|146220066|gb|ABQ11249.1| Ssu72-like protein [Populus trichocarpa]
Length = 50
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
+ A+VCSSN NRSMEAH+ L + G DV S+GTG
Sbjct: 3 FRYAMVCSSNQNRSMEAHSLLKRXGFDVSSYGTG 36
>gi|146220074|gb|ABQ11253.1| Ssu72-like protein [Salix caprea f. pendula]
Length = 41
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
+ A+VCSSN NRSMEAH+ L + G DV S+GTG
Sbjct: 3 FRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTG 36
>gi|221220002|gb|ACM08662.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
Length = 93
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 40/104 (38%)
Query: 25 LSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITG 84
SK+G +V+SFGTG + G
Sbjct: 8 FSKRGFEVRSFGTGSH---------------------------------------VKLPG 28
Query: 85 TAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNK 128
A DKPNVYDF TTYE +Y DL+ KDK Y + +H ++K
Sbjct: 29 PAPDKPNVYDF-KTTYEQMYNDLVRKDKELYPLHSCIHTQTQHK 71
>gi|326678030|ref|XP_003200966.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Danio rerio]
Length = 771
Score = 40.0 bits (92), Expect = 0.82, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 208 LDNEIDEIMQEFEEKCSRPLLHT 230
++NE+DE++QEFEEK RP LH+
Sbjct: 1 MENEMDELLQEFEEKSHRPFLHS 23
>gi|402589399|gb|EJW83331.1| hypothetical protein WUBG_05760 [Wuchereria bancrofti]
Length = 49
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 170 ENTPVHLINIDIQDNQEEATLGAFLASELMSMF 202
E VH+INIDIQDN EEAT+GA +L F
Sbjct: 6 EGDSVHVINIDIQDNHEEATIGALFVYDLCLRF 38
>gi|328874212|gb|EGG22578.1| hypothetical protein DFA_04708 [Dictyostelium fasciculatum]
Length = 78
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D EEA GA A +L+++ ++ ++ +D+I+ +F K R LL++++FY
Sbjct: 26 HDTHEEAVGGAQHALQLINIIDDNDNWEDSMDKILDQFYRKTGRQLLYSLMFY 78
>gi|327350992|gb|EGE79849.1| hypothetical protein BDDG_02790 [Ajellomyces dermatitidis ATCC
18188]
Length = 797
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 96 HTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVY 155
H T ED+ Q L +KA N L LE NK K + ES ++ I + E +
Sbjct: 359 HNTASEDVCQKLRETEKALELANSKLEALENNKLNTKKLQGLAESSERKAIELQKENKAL 418
Query: 156 DQVLEHFDNQMISLEN 171
L F +M S E+
Sbjct: 419 KLSLARFKEEMTSYED 434
>gi|217075510|gb|ACJ86115.1| unknown [Medicago truncatula]
gi|388512945|gb|AFK44534.1| unknown [Medicago truncatula]
Length = 221
Score = 36.6 bits (83), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 118 NGLLHMLERNKRIKLK--------PEKFQESKDKFDIIITC--EERVYDQVLEHFDN--- 164
N L MLE+ + + LK ++F SK+K I C +R+YDQ +E N
Sbjct: 27 NETLEMLEKKETVLLKKAGAEVEKAKEFTRSKNK-RAAIQCLKRKRLYDQQVEQLGNFQL 85
Query: 165 ----QMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEI----- 215
QMI LE +D GAF + + F +D+DN +DEI
Sbjct: 86 RIHDQMIMLEGAQATTETVDALRT------GAFAMKRMQTEF-NLDDVDNIMDEITEQTE 138
Query: 216 -MQEFEEKCSRPL 227
M++ +E S P+
Sbjct: 139 KMRQVQEALSAPI 151
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,571,979,287
Number of Sequences: 23463169
Number of extensions: 144499539
Number of successful extensions: 375353
Number of sequences better than 100.0: 482
Number of HSP's better than 100.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 373619
Number of HSP's gapped (non-prelim): 919
length of query: 234
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 96
effective length of database: 9,121,278,045
effective search space: 875642692320
effective search space used: 875642692320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 74 (33.1 bits)