Query psy9210
Match_columns 234
No_of_seqs 108 out of 187
Neff 2.5
Searched_HMMs 29240
Date Fri Aug 16 21:44:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9210.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9210hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9y_A CG14216, LD40846P; phos 100.0 4E-106 2E-110 690.4 20.5 192 2-234 7-198 (198)
2 4h3k_B RNA polymerase II subun 100.0 8E-105 3E-109 688.7 20.6 191 3-234 24-214 (214)
3 3rof_A Low molecular weight pr 97.3 0.0013 4.5E-08 53.0 9.4 134 4-224 6-155 (158)
4 1u2p_A Ptpase, low molecular w 97.1 0.00075 2.5E-08 53.6 5.7 105 1-116 1-151 (163)
5 1jl3_A Arsenate reductase; alp 96.6 0.0062 2.1E-07 47.0 6.9 98 4-116 3-136 (139)
6 1jf8_A Arsenate reductase; ptp 96.5 0.0041 1.4E-07 48.0 5.5 96 4-114 3-128 (131)
7 2cwd_A Low molecular weight ph 96.4 0.004 1.4E-07 49.5 5.1 105 1-115 1-147 (161)
8 2wmy_A WZB, putative acid phos 96.2 0.0075 2.6E-07 47.5 5.6 103 5-116 9-146 (150)
9 3n8i_A Low molecular weight ph 96.1 0.0052 1.8E-07 49.1 4.4 110 2-118 3-156 (157)
10 1d1q_A Tyrosine phosphatase (E 96.1 0.0096 3.3E-07 47.2 5.7 108 3-116 6-158 (161)
11 1y1l_A Arsenate reductase (ARS 95.9 0.033 1.1E-06 42.4 8.0 92 6-114 1-121 (124)
12 2fek_A Low molecular weight pr 95.9 0.014 4.9E-07 47.3 6.0 103 5-116 23-160 (167)
13 2l17_A Synarsc, arsenate reduc 95.9 0.019 6.4E-07 44.4 6.4 93 6-115 6-130 (134)
14 1p8a_A Protein tyrosine phosph 95.8 0.023 7.8E-07 44.3 6.6 101 4-117 4-142 (146)
15 2wja_A Putative acid phosphata 95.7 0.015 5E-07 47.2 5.5 103 5-116 27-164 (168)
16 3t38_A Arsenate reductase; low 95.2 0.074 2.5E-06 45.1 8.3 96 1-114 78-204 (213)
17 3rh0_A Arsenate reductase; oxi 94.9 0.081 2.8E-06 42.2 7.4 94 5-113 21-144 (148)
18 3jvi_A Protein tyrosine phosph 94.3 0.021 7.2E-07 45.6 2.5 40 2-41 2-50 (161)
19 4etm_A LMPTP, low molecular we 93.7 0.038 1.3E-06 44.9 3.0 37 5-41 19-63 (173)
20 4egs_A Ribose 5-phosphate isom 93.5 0.06 2.1E-06 43.8 3.9 39 3-41 33-77 (180)
21 4etn_A LMPTP, low molecular we 93.3 0.051 1.7E-06 44.8 3.1 38 4-41 34-77 (184)
22 2gi4_A Possible phosphotyrosin 92.4 0.1 3.4E-06 41.4 3.6 36 6-41 3-46 (156)
23 3iwh_A Rhodanese-like domain p 89.8 0.29 9.9E-06 35.9 3.6 33 2-35 54-86 (103)
24 3foj_A Uncharacterized protein 89.0 0.31 1.1E-05 34.4 3.2 35 3-38 55-89 (100)
25 3gk5_A Uncharacterized rhodane 87.8 0.38 1.3E-05 34.7 3.1 35 3-38 54-88 (108)
26 3eme_A Rhodanese-like domain p 86.9 0.61 2.1E-05 32.9 3.6 35 3-38 55-89 (103)
27 3nhv_A BH2092 protein; alpha-b 86.8 0.57 2E-05 35.7 3.7 37 3-39 71-108 (144)
28 3g5j_A Putative ATP/GTP bindin 86.6 0.41 1.4E-05 34.3 2.7 34 5-38 90-123 (134)
29 2jtq_A Phage shock protein E; 86.2 0.76 2.6E-05 31.4 3.8 33 3-36 40-73 (85)
30 1vee_A Proline-rich protein fa 85.4 1 3.6E-05 33.5 4.4 42 4-46 74-116 (134)
31 1qxn_A SUD, sulfide dehydrogen 82.5 1.4 4.9E-05 33.1 4.2 35 3-38 81-116 (137)
32 1wv9_A Rhodanese homolog TT165 81.5 1.1 3.7E-05 31.3 2.9 33 5-38 54-86 (94)
33 3d1p_A Putative thiosulfate su 80.7 1.3 4.6E-05 32.7 3.4 34 4-38 91-125 (139)
34 2fsx_A RV0390, COG0607: rhodan 80.3 1.8 6E-05 32.7 4.0 35 4-39 80-115 (148)
35 1gmx_A GLPE protein; transfera 79.5 1.4 4.9E-05 31.2 3.1 35 3-38 57-92 (108)
36 1tq1_A AT5G66040, senescence-a 76.1 2 6.7E-05 31.8 3.1 35 3-38 81-116 (129)
37 3hix_A ALR3790 protein; rhodan 74.5 2 6.8E-05 30.7 2.7 34 4-38 52-86 (106)
38 3flh_A Uncharacterized protein 73.0 3.2 0.00011 30.4 3.6 35 3-38 70-106 (124)
39 2hhg_A Hypothetical protein RP 72.8 2 6.9E-05 31.5 2.4 34 4-38 86-120 (139)
40 2l2q_A PTS system, cellobiose- 71.2 5 0.00017 29.6 4.3 40 2-41 2-46 (109)
41 3ilm_A ALR3790 protein; rhodan 67.9 3.4 0.00011 31.4 2.8 35 3-38 55-90 (141)
42 2k0z_A Uncharacterized protein 62.5 7.3 0.00025 27.9 3.6 32 3-35 55-86 (110)
43 1rcu_A Conserved hypothetical 57.4 11 0.00037 31.4 4.2 32 6-38 25-66 (195)
44 3tg1_B Dual specificity protei 53.6 9.2 0.00032 29.0 3.0 34 5-38 94-135 (158)
45 1e0c_A Rhodanese, sulfurtransf 52.1 12 0.00041 30.3 3.5 35 4-38 81-116 (271)
46 1t3k_A Arath CDC25, dual-speci 51.6 17 0.00057 27.8 4.1 35 4-38 85-128 (152)
47 1rhs_A Sulfur-substituted rhod 47.6 16 0.00053 30.4 3.6 34 4-38 240-274 (296)
48 2a2k_A M-phase inducer phospha 46.3 13 0.00045 28.4 2.8 34 5-38 90-136 (175)
49 1c25_A CDC25A; hydrolase, cell 46.3 16 0.00055 27.4 3.3 34 5-38 88-134 (161)
50 3aay_A Putative thiosulfate su 44.3 15 0.00051 29.8 3.0 35 4-38 77-112 (277)
51 2eg4_A Probable thiosulfate su 40.4 19 0.00065 28.6 3.0 33 5-38 62-95 (230)
52 1fr2_A Colicin E9 immunity pro 39.2 19 0.00065 27.0 2.6 34 195-228 15-49 (86)
53 1yt8_A Thiosulfate sulfurtrans 39.1 24 0.00083 32.2 3.8 35 4-39 322-357 (539)
54 3i2v_A Adenylyltransferase and 38.5 16 0.00056 25.7 2.1 32 6-38 74-112 (127)
55 2j6p_A SB(V)-AS(V) reductase; 38.5 18 0.00063 27.3 2.5 32 7-38 71-109 (152)
56 4gnr_A ABC transporter substra 38.5 70 0.0024 25.7 6.1 73 153-229 29-104 (353)
57 3s5p_A Ribose 5-phosphate isom 35.7 24 0.00083 29.4 3.0 40 2-41 19-59 (166)
58 4gpa_A Glutamate receptor 4; P 34.5 41 0.0014 27.1 4.1 48 152-200 20-67 (389)
59 3ono_A Ribose/galactose isomer 33.9 40 0.0014 29.1 4.2 35 3-37 2-41 (214)
60 3sbx_A Putative uncharacterize 33.9 40 0.0014 27.9 4.0 33 3-35 12-50 (189)
61 2ppw_A Conserved domain protei 33.7 32 0.0011 29.7 3.5 36 4-39 3-43 (216)
62 1tvm_A PTS system, galactitol- 33.7 46 0.0016 24.6 4.0 37 4-40 21-63 (113)
63 3czc_A RMPB; alpha/beta sandwi 33.5 27 0.00091 25.7 2.6 35 4-38 18-59 (110)
64 1t35_A Hypothetical protein YV 33.5 30 0.001 28.2 3.2 31 6-36 3-40 (191)
65 3qua_A Putative uncharacterize 33.5 43 0.0015 27.9 4.2 32 4-35 22-59 (199)
66 2r7a_A Bacterial heme binding 33.4 1.6E+02 0.0056 23.1 7.4 72 143-223 59-133 (256)
67 1wek_A Hypothetical protein TT 32.9 32 0.0011 28.8 3.3 32 5-36 38-76 (217)
68 1weh_A Conserved hypothetical 32.9 33 0.0011 27.4 3.3 31 6-36 3-40 (171)
69 2fb7_A SM-like protein, LSM-14 32.8 23 0.00077 27.5 2.2 27 8-41 34-60 (95)
70 4hn9_A Iron complex transport 32.4 1.8E+02 0.0062 24.2 7.9 68 143-223 116-186 (335)
71 2iz6_A Molybdenum cofactor car 31.9 30 0.001 28.2 2.9 34 4-37 13-53 (176)
72 1e2b_A Enzyme IIB-cellobiose; 30.9 50 0.0017 24.4 3.8 38 4-41 3-45 (106)
73 2ouc_A Dual specificity protei 30.8 35 0.0012 24.2 2.8 33 5-38 84-125 (142)
74 4f67_A UPF0176 protein LPG2838 30.7 24 0.00083 30.4 2.3 62 4-77 181-245 (265)
75 3grc_A Sensor protein, kinase; 30.1 27 0.00092 24.0 2.0 40 1-41 3-42 (140)
76 1uar_A Rhodanese; sulfurtransf 29.9 19 0.00066 29.2 1.5 35 4-38 79-114 (285)
77 1urh_A 3-mercaptopyruvate sulf 29.4 56 0.0019 26.5 4.2 34 4-38 86-121 (280)
78 2wlr_A Putative thiosulfate su 29.2 40 0.0014 29.6 3.5 34 4-38 358-392 (423)
79 2qxy_A Response regulator; reg 29.0 28 0.00095 24.0 2.0 40 1-41 1-40 (142)
80 2vxe_A CG10686-PA; EDC3, CAR-1 28.9 32 0.0011 26.4 2.4 27 8-41 28-54 (88)
81 2vvr_A Ribose-5-phosphate isom 27.2 68 0.0023 26.1 4.2 37 5-41 2-39 (149)
82 3md9_A Hemin-binding periplasm 27.2 1.2E+02 0.0042 23.8 5.7 52 143-204 59-110 (255)
83 3kto_A Response regulator rece 27.0 26 0.00088 24.2 1.5 40 1-41 3-42 (136)
84 2chu_A CEUE, enterochelin upta 26.1 1.1E+02 0.0036 24.9 5.2 70 143-223 95-167 (296)
85 3u43_A Colicin-E2 immunity pro 26.1 40 0.0014 25.8 2.5 32 195-226 15-47 (94)
86 3lte_A Response regulator; str 25.5 32 0.0011 23.3 1.7 39 2-41 4-42 (132)
87 2vt8_A HPI31, PI31, proteasome 25.4 37 0.0013 26.7 2.3 28 20-47 27-62 (153)
88 3f4a_A Uncharacterized protein 25.2 44 0.0015 26.1 2.7 34 5-38 105-145 (169)
89 3hzu_A Thiosulfate sulfurtrans 24.6 42 0.0014 28.5 2.6 34 4-38 259-294 (318)
90 1qb0_A Protein (M-phase induce 24.3 57 0.0019 26.1 3.3 34 5-38 110-156 (211)
91 2isb_A Fumarase, FUM-1; NP_069 24.0 35 0.0012 29.2 2.1 70 20-129 49-121 (192)
92 2r79_A Periplasmic binding pro 24.0 2.1E+02 0.0073 23.0 6.7 70 143-222 59-131 (283)
93 1ydh_A AT5G11950; structural g 23.9 1E+02 0.0034 25.8 4.8 32 6-37 11-49 (216)
94 2a33_A Hypothetical protein; s 23.7 92 0.0031 26.0 4.5 31 6-36 15-52 (215)
95 1unk_A Colicin E7; immunity pr 23.6 39 0.0013 25.7 2.0 39 195-233 15-55 (87)
96 3gfv_A Uncharacterized ABC tra 23.5 84 0.0029 25.5 4.2 68 143-221 95-165 (303)
97 2q8p_A Iron-regulated surface 22.8 2.8E+02 0.0094 21.7 7.0 69 143-223 60-131 (260)
98 3hzu_A Thiosulfate sulfurtrans 22.8 54 0.0018 27.8 3.0 35 4-38 111-146 (318)
99 3op3_A M-phase inducer phospha 22.7 50 0.0017 27.3 2.7 32 7-38 127-169 (216)
100 1rhs_A Sulfur-substituted rhod 22.5 87 0.003 25.8 4.1 34 5-38 93-129 (296)
101 1n2z_A Vitamin B12 transport p 21.5 1E+02 0.0036 24.1 4.2 70 143-223 57-129 (245)
102 1okg_A Possible 3-mercaptopyru 21.4 53 0.0018 28.9 2.7 36 2-38 244-280 (373)
103 3bei_A Prothrombin; serine pro 21.3 24 0.00081 24.3 0.4 12 30-41 5-16 (44)
104 1yt8_A Thiosulfate sulfurtrans 21.2 57 0.0019 29.7 3.0 34 4-38 63-97 (539)
105 3tlk_A Ferrienterobactin-bindi 21.2 2.4E+02 0.0081 23.2 6.5 68 143-223 115-187 (326)
106 3nrx_A Protein regulator of cy 21.1 70 0.0024 25.4 3.1 24 206-229 64-87 (130)
107 2vvp_A Ribose-5-phosphate isom 21.1 49 0.0017 27.3 2.3 37 4-40 3-40 (162)
108 3lua_A Response regulator rece 20.4 53 0.0018 22.6 2.1 40 1-41 1-41 (140)
109 3e1k_B Lactose regulatory prot 20.3 47 0.0016 19.9 1.5 17 95-111 5-21 (22)
110 3lkb_A Probable branched-chain 20.2 2E+02 0.0069 23.4 5.8 39 153-192 29-67 (392)
111 3iwt_A 178AA long hypothetical 20.1 65 0.0022 25.0 2.7 35 2-37 13-61 (178)
112 3hv2_A Response regulator/HD d 20.1 55 0.0019 23.0 2.1 39 2-41 12-50 (153)
113 3lop_A Substrate binding perip 20.1 2.2E+02 0.0075 22.9 6.0 39 153-192 27-65 (364)
No 1
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=100.00 E-value=4.4e-106 Score=690.38 Aligned_cols=192 Identities=59% Similarity=1.029 Sum_probs=190.5
Q ss_pred CCCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCCCccccceeeeeccccccccccccccceeeeeeeccccccc
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQS 81 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
+++||||||||||||||||||++|+|+||+|+|||||++| |
T Consensus 7 ~~~l~~avVCaSN~NRSMEaH~~L~k~G~~V~SfGTGs~V---------------------------------------r 47 (198)
T 3p9y_A 7 PSKLAVAVVDSSNMNRSMEAHNFLAKKGFNVRSYGTGERV---------------------------------------K 47 (198)
T ss_dssp TTCCEEEEEESSSSSHHHHHHHHHHHTTCEEEEEECSSSE---------------------------------------E
T ss_pred CCCceEEEEcCCCCcccHHHHHHHHhCCCceeecCCCcee---------------------------------------E
Confidence 4789999999999999999999999999999999999999 9
Q ss_pred CCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHhhcchhhhhhhcccCcCCCccccccCCCccEEEEecchhHHHHHHh
Q psy9210 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEH 161 (234)
Q Consensus 82 lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt~NGlL~MLdRN~rIK~~PErfQe~~~~fDvIiTcEERvyD~V~Ed 161 (234)
|||||+||||||+|| |||++||+||.+||+++||+||||+||+|||+||++|||||++++.|||||||||||||+|+||
T Consensus 48 LPGps~d~PNvY~Fg-T~Y~~iy~dL~~kd~~lY~~NGiL~MLdRNr~iK~~PERfQ~~~~~fDvIiTcEERvfD~Vved 126 (198)
T 3p9y_A 48 LPGMAFDKPNVYEFG-TKYEDIYRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMH 126 (198)
T ss_dssp ECCSSTTCCEEECTT-CCHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHCSSCCBGGGCCCCCSEEEESSHHHHHHHHHH
T ss_pred cCCCCCCCCCccCCC-CcHHHHHHHHHHhhHHHHHHcCcHHHHhcCccccCCccchhccCCCcCEEEEeechhHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHcCCCceeeeccC
Q psy9210 162 FDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234 (234)
Q Consensus 162 l~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~~eDld~~ideil~~feek~~r~~Lhtv~fY 234 (234)
|.+ |++.+++|||||||||+||||||++||++|||||++|++++|||++|++||++||+|++||+|||||||
T Consensus 127 L~~-R~~~~~~pVHViNvDIkDn~EeA~~Ga~~ileL~~~l~~~~d~e~~i~~il~~fe~~~~~~~Lhtv~fY 198 (198)
T 3p9y_A 127 MES-MESVDNRPVHVLNVDVVNNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 198 (198)
T ss_dssp HHT-SCCSSCCEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTCCCEEEEEEC
T ss_pred HHh-cccCcCceEEEEEeeccCCHHHHHHHHHHHHHHHHHHHHchhHHHHHHHHHHHHHHhcCCCceeeeecC
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999
No 2
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=100.00 E-value=8.3e-105 Score=688.71 Aligned_cols=191 Identities=62% Similarity=0.992 Sum_probs=188.5
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCCCccccceeeeeccccccccccccccceeeeeeecccccccC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSI 82 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (234)
++||||||||||||||||||++|+|+||+|+|||||++| ||
T Consensus 24 ~~Lr~avVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~V---------------------------------------kL 64 (214)
T 4h3k_B 24 SPLRVAVVSSSNQNRSMEAHNILSKRGFSVRSFGTGTHV---------------------------------------KL 64 (214)
T ss_dssp --CEEEEEESSSSSHHHHHHHHHHHTTCEEEEEECSSSE---------------------------------------EE
T ss_pred CCCeEEEECCCCcchhHHHHHHHHHCCCceEeecCCCcc---------------------------------------CC
Confidence 469999999999999999999999999999999999999 99
Q ss_pred CCCCCCCCceecCCCCcHHHHHHHHHhccHHHHhhcchhhhhhhcccCcCCCccccccCCCccEEEEecchhHHHHHHhH
Q psy9210 83 TGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF 162 (234)
Q Consensus 83 PG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt~NGlL~MLdRN~rIK~~PErfQe~~~~fDvIiTcEERvyD~V~Edl 162 (234)
||||+|+||||+|| |||++||+||.+||+++||+||||+||+||++||++|||||+++++|||||||||||||+|+|||
T Consensus 65 PGps~d~PnvY~Fg-T~Y~~iy~dL~~kd~~lY~~NGlL~MLdRN~~iK~~PER~Q~~~~~fDvViTcEERvfD~Vvedl 143 (214)
T 4h3k_B 65 PGPAPDKPNVYDFK-TTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL 143 (214)
T ss_dssp CCSSTTCCEEECTT-SCHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTCSSCCBGGGCCCCCSEEEESSHHHHHHHHHHH
T ss_pred CCCCCCCCCccCCC-CCHHHHHHHHHhHCHHHHHHcCcHHHHhCCccccCCChhhhccCCCccEEEEccchhHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHcCCCceeeeccC
Q psy9210 163 DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234 (234)
Q Consensus 163 ~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~~eDld~~ideil~~feek~~r~~Lhtv~fY 234 (234)
.+ |++.+++|||||||||+||||||++||++|||||++|++++|||++|++||++||+|++|++|||||||
T Consensus 144 ~~-R~~~~~~pvHVINvdIkDn~EeA~~Ga~~ileL~~~le~~~D~e~~id~il~~fe~k~~r~~Lhtv~fY 214 (214)
T 4h3k_B 144 NS-REQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 214 (214)
T ss_dssp HH-SCCSSCCEEEEEEECCCSSHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHSCCEEEEEEEC
T ss_pred Hh-cCCCCCceEEEEEecccCCHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCCCceeeeecC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999
No 3
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=97.32 E-value=0.0013 Score=53.03 Aligned_cols=134 Identities=19% Similarity=0.313 Sum_probs=83.7
Q ss_pred CceEEEEecCCCccchHHHHHHhhC----C---CceeeccCCCCCCccccceeeeeccccccccccccccceeeeeeecc
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKK----G---VDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVN 76 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~----G---~~V~SfGTG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (234)
..||-.||..|-=||--|.++|++. | +.|.|-||+..-
T Consensus 6 m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~----------------------------------- 50 (158)
T 3rof_A 6 MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN----------------------------------- 50 (158)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS-----------------------------------
T ss_pred CCEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc-----------------------------------
Confidence 4689999999999999999988764 2 789999998621
Q ss_pred cccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHhhcchhhhhhhcccCc-CCCccccccCCCccEEEEecchhH
Q psy9210 77 LFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIK-LKPEKFQESKDKFDIIITCEERVY 155 (234)
Q Consensus 77 ~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt~NGlL~MLdRN~rIK-~~PErfQe~~~~fDvIiTcEERvy 155 (234)
.|..+|. ..-+ --.+.|+ .+. ..|..+.+.. .||+|||-++.-+
T Consensus 51 ------~G~~~~~------------~a~~--------~l~~~Gi--------d~~~~~ar~l~~~~-~~DlIi~Md~~~~ 95 (158)
T 3rof_A 51 ------LGEPPHE------------GTQK--------ILNKHNI--------PFDGMISELFEATD-DFDYIVAMDQSNV 95 (158)
T ss_dssp ------TTCCCCH------------HHHH--------HHHHTTC--------CCTTCCCCBCCTTC-CCSEEEESSHHHH
T ss_pred ------cCCCCCH------------HHHH--------HHHHcCC--------CcCCCcceECChhh-cCCEEEEcCHHHH
Confidence 1333331 1111 1122343 222 2344454444 7999999999887
Q ss_pred HHHHHhHhhhcccCCCceeEEE------E-eecCCCHHHHhhhHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHcC
Q psy9210 156 DQVLEHFDNQMISLENTPVHLI------N-IDIQDNQEEATLGAFLASELMSMFIKC-EDLDNEIDEIMQEFEEKCS 224 (234)
Q Consensus 156 D~V~Edl~~~r~~~~~~pVHvI------N-iDI~Dn~EeA~~Ga~~i~eL~~~l~~~-eDld~~ideil~~feek~~ 224 (234)
+.+...+-. ....||.+ . -||.|-.-. |+ ++++ +.++..++.++++..++++
T Consensus 96 ~~l~~~~p~-----~~~kv~~l~~~~~~~~~~VpDPyy~---~~---------F~~v~~~Ie~~~~~ll~~l~~~~~ 155 (158)
T 3rof_A 96 DNIKSINPN-----LKGQLFKLLEFSNMEESDVPDPYYT---NN---------FEGVYDMVLSSCDNLIDYIVKDAN 155 (158)
T ss_dssp HHHHHHCTT-----CCSEEEEGGGGCCSSCSSCCCHHHH---CC---------HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCC-----CcCEEEEehhhccCCCCcCCCCCCC---ch---------HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 776654332 22256654 2 688887642 21 3333 4467788888888877754
No 4
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=97.10 E-value=0.00075 Score=53.62 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=68.8
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhhC----C----CceeeccCCC-----------------------CCCcccc---
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKK----G----VDVKSFGTGD-----------------------KKPQQWE--- 46 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k~----G----~~V~SfGTG~-----------------------~v~~~~~--- 46 (234)
|+.+.||-+||..|-=||--|.++|++. | +.|.|-||+. +.++||.
T Consensus 1 m~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s~~ar~l~~~~ 80 (163)
T 1u2p_A 1 MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEH 80 (163)
T ss_dssp ---CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHH
T ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCCceeeECChhh
Confidence 7788999999999999999999888775 3 7799999997 4566654
Q ss_pred ---ceeeeeccccccc---cccccccceeeeeeecccccccCCCC-----CCCCCceecCCC-CcHHHHHHHHHhccHHH
Q psy9210 47 ---SVVIFHCCDFCSE---LIPLFFHKVFVFQISVNLFFQSITGT-----AMDKPNVYDFHT-TTYEDIYQDLMNKDKAF 114 (234)
Q Consensus 47 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lPG~-----a~dkPNvY~F~~-TtY~~Iy~dL~~kD~~~ 114 (234)
..||.-||.--.+ +.|-. .|++.+- -| .|+. .+..| | +++ ..|+++|+.|...=..|
T Consensus 81 ~~~DlIi~Md~~~~~~l~~~~p~~-~kv~~l~----~~---~~~~~~~~w~I~DP--~-~~~~~~f~~~~~~I~~~~~~l 149 (163)
T 1u2p_A 81 LAADLLVALDRNHARLLRQLGVEA-ARVRMLR----SF---DPRSGTHALDVEDP--Y-YGDHSDFEEVFAVIESALPGL 149 (163)
T ss_dssp HTSSEEEESSHHHHHHHHHTTCCG-GGEEEGG----GG---STTCCSSCCCCCCC--T-TSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEeCHHHHHHHHHHCCCc-ceEEehh----hh---cccccCCCCCCCCC--C-CCCHHHHHHHHHHHHHHHHHH
Confidence 6777777764333 34655 7776542 11 2332 34444 4 241 15888888887765554
Q ss_pred Hh
Q psy9210 115 YT 116 (234)
Q Consensus 115 Yt 116 (234)
..
T Consensus 150 l~ 151 (163)
T 1u2p_A 150 HD 151 (163)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 5
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=96.55 E-value=0.0062 Score=47.01 Aligned_cols=98 Identities=20% Similarity=0.254 Sum_probs=64.4
Q ss_pred CceEEEEecCCCccchHHHHHHhhCC---CceeeccCCCC--------------------CCccccc-------eeeeec
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKG---VDVKSFGTGDK--------------------KPQQWES-------VVIFHC 53 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G---~~V~SfGTG~~--------------------v~~~~~~-------~~~~~~ 53 (234)
+.||-+||..|-=||--|.++|++.. +.|.|-||+.+ .|+||.. .||--
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~~~~~p~a~~~l~~~Gid~s~~~sr~l~~~~~~~~D~Ii~m- 81 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTL- 81 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSCCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHTTCSEEEEC-
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCCCCCCHHHHHHHHHcCCCcccCccCcCCHHHhhcCCEEEEe-
Confidence 45899999999999999999999853 78999999864 6777753 34444
Q ss_pred cccccccccccccceeeeeeecccccccCCCCCCCCCceecC-CC-----CcHHHHHHHHHhccHHHHh
Q psy9210 54 CDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDF-HT-----TTYEDIYQDLMNKDKAFYT 116 (234)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F-~~-----TtY~~Iy~dL~~kD~~~Yt 116 (234)
|+-=.++.|.+-.++..+. + .+ ..| |.. |+ ..|+++|++|...=+.|..
T Consensus 82 ~~~~~~~~p~~~~~~~~~~------~-~i-----~DP--~~~~g~~~e~~~~f~~~~~~I~~~i~~ll~ 136 (139)
T 1jl3_A 82 CGDAADKCPMTPPHVKREH------W-GF-----DDP--ARAQGTEEEKWAFFQRVRDEIGNRLKEFAE 136 (139)
T ss_dssp SHHHHHHCCCCCTTSEEEE------C-CC-----CCG--GGCCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHhhCCCCCCCceEEe------c-cC-----CCC--cccCCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5532345676666654431 1 22 223 433 31 1488888888776555543
No 6
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=96.49 E-value=0.0041 Score=47.98 Aligned_cols=96 Identities=14% Similarity=0.184 Sum_probs=62.5
Q ss_pred CceEEEEecCCCccchHHHHHHhhC---CCceeeccCCCC--------------------CCcccc-------ceeeeec
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKK---GVDVKSFGTGDK--------------------KPQQWE-------SVVIFHC 53 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~---G~~V~SfGTG~~--------------------v~~~~~-------~~~~~~~ 53 (234)
+.||-.||..|.=||--|.++|++. ++.|.|-||+.+ .|+||. ..||--
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~~~~~p~a~~~l~~~Gid~s~~~ar~l~~~~~~~~D~Ii~m- 81 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTL- 81 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHHHCSEEEEC-
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCCCCCCHHHHHHHHHcCCCcccCccccCChHHhccCCEEEEc-
Confidence 5689999999999999999999985 478999999865 567764 344444
Q ss_pred cccccccccccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHH
Q psy9210 54 CDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF 114 (234)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~ 114 (234)
|+-=.++.|.+-.|++.+. + .+|-| |.=+...|+++|++|.+.=+.|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~------~-~i~DP-------~g~~~~~f~~~~~~i~~~~~~l 128 (131)
T 1jf8_A 82 CSDADNNCPILPPNVKKEH------W-GFDDP-------AGKEWSEFQRVRDEIKLAIEKF 128 (131)
T ss_dssp SHHHHHHSCCCCTTSEEEE------C-CCCCC-------TTSCHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHhhCcCCCCCcEEEE------e-cCCCc-------CCCCHHHHHHHHHHHHHHHHHH
Confidence 3421234566556665441 1 33333 3111125888888887654444
No 7
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=96.40 E-value=0.004 Score=49.55 Aligned_cols=105 Identities=24% Similarity=0.332 Sum_probs=68.6
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhhC----C----CceeeccCCC-----------------------CCCcccc---
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKK----G----VDVKSFGTGD-----------------------KKPQQWE--- 46 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k~----G----~~V~SfGTG~-----------------------~v~~~~~--- 46 (234)
|..+.||-.||..|.=||--|.++|++. | +.|.|-||+. +.|+||.
T Consensus 1 ~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~ar~l~~~~ 80 (161)
T 2cwd_A 1 MDRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFPHVARRLTRED 80 (161)
T ss_dssp -CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCCCCCCBCCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCccccccCCCHhH
Confidence 5667899999999999999999888773 4 5799999998 6788874
Q ss_pred ----ceeeeecccccc---ccccccccceeeeeeecccccccCCCCCCCCCceecCCC-CcHHHHHHHHHhccHHHH
Q psy9210 47 ----SVVIFHCCDFCS---ELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHT-TTYEDIYQDLMNKDKAFY 115 (234)
Q Consensus 47 ----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~-TtY~~Iy~dL~~kD~~~Y 115 (234)
.+||--|+.-=. ++.|-+-.|++.+.--. .+..+..| |. ++ ..|+++|+.|...=+.|.
T Consensus 81 ~~~~DlIi~M~~~~~~~l~~~~p~~~~kv~~l~~~~-------~~~~i~DP--~~-~~~~~f~~~~~~I~~~v~~ll 147 (161)
T 2cwd_A 81 VLAYDHILVMDRENLEEVLRRFPEARGKVRLVLEEL-------GGGEVQDP--YY-GDLEDFREVYWTLEAALQAFL 147 (161)
T ss_dssp HHHCSEEEESSHHHHHHHHHHCGGGTTTEEEGGGGG-------TCCCCCCC--TT-SCHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCEEEECChHHHHHHHHHCCCccCcEEeehhhc-------CCCCCCCC--CC-CCHHHHHHHHHHHHHHHHHHH
Confidence 456666654322 24465556776542111 11234444 32 31 268888888877655443
No 8
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=96.19 E-value=0.0075 Score=47.47 Aligned_cols=103 Identities=17% Similarity=0.387 Sum_probs=66.1
Q ss_pred ceEEEEecCCCccchHHHHHHhh--CCCceeeccCCC-----------------------CCCcccc-------ceeeee
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSK--KGVDVKSFGTGD-----------------------KKPQQWE-------SVVIFH 52 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k--~G~~V~SfGTG~-----------------------~v~~~~~-------~~~~~~ 52 (234)
.||-.||..|.=||--|.++|++ .++.|.|-||+. +.|+||. .+||--
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~~~~~v~SAGt~~~~g~~~~p~a~~~l~e~Gid~~~~~ar~l~~~~~~~~DlIi~m 88 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGALVDHTADESAIRVAEKNGLCLKGHRGTKFTSALARQYDLLLVM 88 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTSEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHTTCSEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhcCCCEEEeccccCCCCCCCCHHHHHHHHHcCCCccCCcccCCCHHHhccCCEEEEc
Confidence 38999999999999999999987 469999999964 5677764 456666
Q ss_pred cccccccc---ccccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHh
Q psy9210 53 CCDFCSEL---IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYT 116 (234)
Q Consensus 53 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt 116 (234)
|+.-=.++ .|-.-.|++.+- -| .++..+..| |.-+...|+++|+.|...=..|..
T Consensus 89 ~~~~~~~l~~~~p~~~~kv~~l~-----~~--~~~~~i~DP--~~~~~~~f~~~~~~i~~~i~~ll~ 146 (150)
T 2wmy_A 89 EYSHLEQISRIAPEARGKTMLFG-----HW--LDSKEIPDP--YRMSDEAFDSVYQLLEQASKRWAE 146 (150)
T ss_dssp CHHHHHHHHHHCGGGGGGEEETT-----TT--SSSCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCccceEeehH-----Hh--CCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66533323 343345655431 11 123344444 322222588899888776555543
No 9
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=96.12 E-value=0.0052 Score=49.15 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=65.8
Q ss_pred CCCceEEEEecCCCccchHHHHHHhhC--------CCceeeccCCCC-----------------------CCcccc----
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSKK--------GVDVKSFGTGDK-----------------------KPQQWE---- 46 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k~--------G~~V~SfGTG~~-----------------------v~~~~~---- 46 (234)
.++.||-.||..|-=||--|.++|++. ++.|.|-||+.. .++|+.
T Consensus 3 ~~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~ 82 (157)
T 3n8i_A 3 QATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKEDF 82 (157)
T ss_dssp -CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHHH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCCCCceeECCHHHc
Confidence 357899999999999999998888763 378999999862 355553
Q ss_pred ---ceeeeecccccc---ccccc---cccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHhh
Q psy9210 47 ---SVVIFHCCDFCS---ELIPL---FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTR 117 (234)
Q Consensus 47 ---~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt~ 117 (234)
..||--|..--. ++.|. .-+||+.+.- | .|+...+-|.=|-=+..-|+..|++|...=+.|..+
T Consensus 83 ~~~DlIi~M~~~n~~~l~~~~p~~~~~~~kv~ll~~-----~--~~~~~~dVpDPy~~~~~~F~~v~~~I~~~~~~ll~~ 155 (157)
T 3n8i_A 83 ATFDYILCMDESNLRDLNRKSNQVKTCKAKIELLGS-----Y--DPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLEK 155 (157)
T ss_dssp HHCSEEEESSHHHHHHHHHHHTTSSCCCCEEEEGGG-----G--CTTCCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCcHHHHHHHHHCCCccCccceEEEHHH-----h--CcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344444443222 22342 2356665421 1 132222333334222124888888888766666555
Q ss_pred c
Q psy9210 118 N 118 (234)
Q Consensus 118 N 118 (234)
+
T Consensus 156 ~ 156 (157)
T 3n8i_A 156 A 156 (157)
T ss_dssp C
T ss_pred h
Confidence 4
No 10
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=96.07 E-value=0.0096 Score=47.24 Aligned_cols=108 Identities=21% Similarity=0.245 Sum_probs=65.5
Q ss_pred CCceEEEEecCCCccchHHHHHHhhC----C-----CceeeccCCC-----------------------CCCcccc----
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKK----G-----VDVKSFGTGD-----------------------KKPQQWE---- 46 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~----G-----~~V~SfGTG~-----------------------~v~~~~~---- 46 (234)
.+.||-.||..|.=||--|.++|++. | +.|.|-||+. +.++||.
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s~~ar~l~~~~~ 85 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTKHF 85 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCCCCBCBCCGGGG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCCceEeECCHHHH
Confidence 45789999999999999999888763 3 7799999986 4667764
Q ss_pred ---ceeeeecccccc---cccccc-ccceeeeeeecccccccCC--CCCCCCCceecCCCCcHHHHHHHHHhccHHHHh
Q psy9210 47 ---SVVIFHCCDFCS---ELIPLF-FHKVFVFQISVNLFFQSIT--GTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYT 116 (234)
Q Consensus 47 ---~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~lP--G~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt 116 (234)
..||--||.-=. ++-|-+ -+|++.+- -|-...| +..+..| |.=+...|+++|+.|...=+.|..
T Consensus 86 ~~~DlIl~M~~~~~~~l~~~~p~~~~~kv~~l~----~~~~~~~~~~~~i~DP--~~~~~~~f~~~~~~I~~~~~~ll~ 158 (161)
T 1d1q_A 86 DEYDYIIGMDESNINNLKKIQPEGSKAKVCLFG----DWNTNDGTVQTIIEDP--WYGDIQDFEYNFKQITYFSKQFLK 158 (161)
T ss_dssp GTCSEEEESSHHHHHHHHHHCCTTCSCEEEEGG----GGCCCSSSSCSSCCCC--TTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEEEeCHHHHHHHHHHCCccchhhEEeHh----hhcccccCCCCcCCCC--CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 455555664321 334532 34555431 1100111 1234444 422223688899888776555544
No 11
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=95.95 E-value=0.033 Score=42.38 Aligned_cols=92 Identities=22% Similarity=0.324 Sum_probs=61.7
Q ss_pred eEEEEecCCCccchHHHHHHhhC--CCceeeccCCC--------------------CCCccccc-------eeeeecccc
Q psy9210 6 KVAVVCSSNMNRSMEAHAYLSKK--GVDVKSFGTGD--------------------KKPQQWES-------VVIFHCCDF 56 (234)
Q Consensus 6 k~AvVCsSN~NRSMEAH~~L~k~--G~~V~SfGTG~--------------------~v~~~~~~-------~~~~~~~~~ 56 (234)
||-.||..|.=||--|.++|++. ++.|.|-||+. +.|+||.. +||-- |+-
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~v~SAGt~~g~~~~~~a~~~l~e~Gids~~~sr~l~~~~~~~~D~Ii~m-~~~ 79 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAKSWKAESAGVEKAERVDETVKRLLAERGLKAKEKPRTVDEVNLDDFDLIVTV-CEE 79 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCSSCCEEEEESSCCSSCCHHHHHHHHTTTCCCCSSCCBGGGSCGGGCSCEEEE-ECS
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcCCEEEEecCCCCCCCCCHHHHHHHHHcCcCCCCccccCChhHhcCCCEEEEe-cCc
Confidence 68899999999999999999987 69999999975 35677643 33333 443
Q ss_pred ccccccccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHH
Q psy9210 57 CSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF 114 (234)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~ 114 (234)
+..|.+-.|++.-. + .+|-|. .=+...|+++|++|...=..|
T Consensus 80 --~~~p~~~~~~~~~~------~-~i~DP~-------~~~~~~f~~~~~~i~~~v~~l 121 (124)
T 1y1l_A 80 --SSCVVLPTDKPVTR------W-HIENPA-------GKDEGTYRRVLAEIEERVKKL 121 (124)
T ss_dssp --SCCBCCSCSSCEEE------E-ECCCCT-------TTCTTHHHHHHHHHHHHHHHH
T ss_pred --ccCcCCCCCeeecc------e-ecCCCC-------CCCHHHHHHHHHHHHHHHHHH
Confidence 67777666654411 1 344443 112246888888887654433
No 12
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=95.89 E-value=0.014 Score=47.25 Aligned_cols=103 Identities=22% Similarity=0.341 Sum_probs=66.9
Q ss_pred ceEEEEecCCCccchHHHHHHhh--CCCceeeccCCC-----------------------CCCcccc-------ceeeee
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSK--KGVDVKSFGTGD-----------------------KKPQQWE-------SVVIFH 52 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k--~G~~V~SfGTG~-----------------------~v~~~~~-------~~~~~~ 52 (234)
.||-.||..|-=||--|.++|++ .++.|.|-||+. +.|+||. .+||--
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~~~~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~~~~~~~~DlIitM 102 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTM 102 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTCEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHHHSSEEEES
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCCCCCCCCCHHHHHHHHHcCCCccCCcCccCCHHHhccCCEEEEc
Confidence 38999999999999999999987 479999999964 5677775 456666
Q ss_pred cccccccc---ccccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHh
Q psy9210 53 CCDFCSEL---IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYT 116 (234)
Q Consensus 53 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt 116 (234)
|+.-=.++ .|-.-.|++.+- -| .++..+..| |.-+...|+++|++|.+.=+.|..
T Consensus 103 ~~~~~~~l~~~~p~~~~kv~~l~-----~w--~~~~~I~DP--~~~~~~~f~~v~~~I~~~v~~ll~ 160 (167)
T 2fek_A 103 EKRHIERLCEMAPEMRGKVMLFG-----HW--DNECEIPDP--YRKSRETFAAVYTLLERSARQWAQ 160 (167)
T ss_dssp CHHHHHHHHHHCGGGGGGEEEGG-----GG--TTTCCCCCC--TTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCcccceEEehH-----Hh--CCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66533323 343345665431 11 123344444 432223588899888876555543
No 13
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=95.87 E-value=0.019 Score=44.39 Aligned_cols=93 Identities=22% Similarity=0.371 Sum_probs=61.4
Q ss_pred eEEEEecCCCccchHHHHHHhhCC---CceeeccCCC--------------------CCCccccc-------eeeeeccc
Q psy9210 6 KVAVVCSSNMNRSMEAHAYLSKKG---VDVKSFGTGD--------------------KKPQQWES-------VVIFHCCD 55 (234)
Q Consensus 6 k~AvVCsSN~NRSMEAH~~L~k~G---~~V~SfGTG~--------------------~v~~~~~~-------~~~~~~~~ 55 (234)
||-.||..|.=||--|.++|++.. +.|.|-||+. +.|+||.. .||--|
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~g~~~~~~a~~~l~e~Gid~s~~~sr~l~~~~~~~~DlIi~md-- 83 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLESSRVHPTAIAMMEEVGIDISGQTSDPIENFNADDYDVVISLC-- 83 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCTTSSCCHHHHHHHHTTTCCCSSCCCCCGGGCCGGGCSEEEECS--
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCCCCCCCHHHHHHHHHcCCCcccCccccCChHHhccCCEEEEeC--
Confidence 899999999999999999998853 8899999974 46777753 333332
Q ss_pred ccccccc--ccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHH
Q psy9210 56 FCSELIP--LFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFY 115 (234)
Q Consensus 56 ~~~~~~~--~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Y 115 (234)
-|.+..| .+-.|++. . + .+|-| |.-+...|+++|+.|...=+.|.
T Consensus 84 ~~~~~~p~~~~~~~~~~---~----~-~i~DP-------~~~~~~~f~~~~~~i~~~v~~ll 130 (134)
T 2l17_A 84 GCGVNLPPEWVTQEIFE---D----W-QLEDP-------DGQSLEVFRTVRGQVKERVENLI 130 (134)
T ss_dssp CSCSCCCTHHHHSSEEE---E----C-CCCCC-------TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhCcccccCCCeec---c----C-CCCCC-------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 3446778 66666531 1 1 23333 32222358888888876554443
No 14
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=95.76 E-value=0.023 Score=44.27 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=66.9
Q ss_pred CceEEEEecCCCccchHHHHHHhhC---CCceeeccCCC------------------------CCCcccc-------cee
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKK---GVDVKSFGTGD------------------------KKPQQWE-------SVV 49 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~---G~~V~SfGTG~------------------------~v~~~~~-------~~~ 49 (234)
+.||-.||..|.=||--|.++|++. .+.|.|-||+. +.|+||. ..|
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr~l~~~~~~~~DlI 83 (146)
T 1p8a_A 4 KKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQITKADFSKFDVI 83 (146)
T ss_dssp CCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCCCCCSHHHHSCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeeccCCHhHhhcCCEE
Confidence 4689999999999999999999874 38999999987 3466664 455
Q ss_pred eeecccccc---ccccc-cccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHhh
Q psy9210 50 IFHCCDFCS---ELIPL-FFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTR 117 (234)
Q Consensus 50 ~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt~ 117 (234)
|--|+.-=. +..|. +-.|++.+-- | ..+..| |. ++..|+++|+.|.+.=+.|..+
T Consensus 84 i~m~~~~~~~l~~~~p~~~~~kv~~l~~---------~-~~i~DP--~~-~~~~f~~~~~~I~~~v~~ll~~ 142 (146)
T 1p8a_A 84 AALDQSILSDINSMKPSNCRAKVVLFNP---------P-NGVDDP--YY-SSDGFPTMFASISKEMKPFLTE 142 (146)
T ss_dssp EESSHHHHHHHHHHCCSSCSCEEEECSC---------T-TSSCCC--SS-SSSSHHHHHHHHHHTTHHHHHH
T ss_pred EEeChHHHHHHHHHCCcccCCeEEEeCC---------C-CCCCCC--CC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 655664322 23455 3456654311 2 233333 33 3147999999998876666544
No 15
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=95.73 E-value=0.015 Score=47.21 Aligned_cols=103 Identities=17% Similarity=0.384 Sum_probs=64.7
Q ss_pred ceEEEEecCCCccchHHHHHHhh--CCCceeeccCCC-----------------------CCCcccc-------ceeeee
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSK--KGVDVKSFGTGD-----------------------KKPQQWE-------SVVIFH 52 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k--~G~~V~SfGTG~-----------------------~v~~~~~-------~~~~~~ 52 (234)
.||-.||..|-=||--|.++|++ .++.|.|-||+. +.|+||. .+||--
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~~~~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~~~~~~~~DlIitM 106 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGALVDHAADESAIRVAEKNGLCLKGHRGTKFTSALARQYDLLLVM 106 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHSTTSEEEEEETTCCTTCCCCHHHHHC---CCCCCTTCCCCBCCHHHHTTCSEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCCCCCCCCCHHHHHHHHHcCCCcccCccCCCChhHhccCCEEEEc
Confidence 48999999999999999999987 469999999964 5677764 456666
Q ss_pred ccccccccc---cccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHHHh
Q psy9210 53 CCDFCSELI---PLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYT 116 (234)
Q Consensus 53 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~Yt 116 (234)
|+.-=.++. |-.-.|++.+- -| .++..+..| |.-+...|+++|+.|...=+.|..
T Consensus 107 ~~~~~~~l~~~~p~~~~kv~~l~-----~w--~~~~~I~DP--~~~~~~~f~~v~~~I~~~v~~ll~ 164 (168)
T 2wja_A 107 EYSHLEQISRIAPEARGKTMLFG-----HW--LDSKEIPDP--YRMSDEAFDSVYQLLEQASKRWAE 164 (168)
T ss_dssp SHHHHHHHHHHCTTTGGGEEETT-----CC-----CCCCCC--TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCcccceEEeeH-----hh--CCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 655333333 43335655431 01 122234444 322222588888888776555543
No 16
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=95.20 E-value=0.074 Score=45.09 Aligned_cols=96 Identities=22% Similarity=0.324 Sum_probs=61.2
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhhC---CCceeeccCCC---------------------CCCccccc-------ee
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKK---GVDVKSFGTGD---------------------KKPQQWES-------VV 49 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k~---G~~V~SfGTG~---------------------~v~~~~~~-------~~ 49 (234)
|+.+.||-.||..|--||--|.++|++. ++.|.|-||+. +.|+||.. +|
T Consensus 78 ~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~~~sr~l~~~~~~~~DlI 157 (213)
T 3t38_A 78 ASPVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGSLPASEIHPLVLEILSERGVNISDAFPKPLTDDVIRASDYV 157 (213)
T ss_dssp SSCCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCCBCCHHHHHHCSEE
T ss_pred cCCCCEEEEECCCchhHHHHHHHHHHHhccCceEEEecccCCCCCCCHHHHHHHHHcCCCcccCcCCcCCHHHhccCCEE
Confidence 4568999999999999999999998874 48999999962 45666643 34
Q ss_pred eeeccccccccccccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHHH
Q psy9210 50 IFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF 114 (234)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~~ 114 (234)
|--.| ++.-|.+-.|.+. -..+|-| |.-+...|+++|++|...=..|
T Consensus 158 itMd~---~~~~P~~~gk~~~--------~w~IpDP-------y~~~~~~F~~v~d~Ie~~v~~L 204 (213)
T 3t38_A 158 ITMGC---GDVCPMYPGKHYL--------DWELADP-------SDEGEDKIQEIIEEIDGRIREL 204 (213)
T ss_dssp EESSC---CSCSCCCSSSEEE--------ESCC------------CCCCCHHHHHHHHHHHHHHH
T ss_pred EEecC---cccCccccCCccC--------CCCCCCC-------CCCCHHHHHHHHHHHHHHHHHH
Confidence 44333 3455665555431 0123333 3223347888998887754444
No 17
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=94.94 E-value=0.081 Score=42.22 Aligned_cols=94 Identities=20% Similarity=0.132 Sum_probs=63.8
Q ss_pred ceEEEEecCCCccchHHHHHHhhC---CCceeeccCCC---------------------CCCccccc------eeeeecc
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSKK---GVDVKSFGTGD---------------------KKPQQWES------VVIFHCC 54 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k~---G~~V~SfGTG~---------------------~v~~~~~~------~~~~~~~ 54 (234)
.||-.||..|--||--|.++|++. ++.|.|-||+. +.++||.. =.|+-=|
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~h~ar~l~~~~~~~~DlIitM~ 100 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKPAQGLNQLSVESIAEVGADMSQGIPKAIDPELLRTVDRVVILG 100 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCCBCCHHHHHHCSEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCCCCCCCHHHHHHHHHcCCCcCCCeeeECCHHHhcCCCEEEEec
Confidence 589999999999999999999884 48999999953 45777753 2455557
Q ss_pred ccccccccccccceeeeeeecccccccCCCCCCCCCceecCCCCcHHHHHHHHHhccHH
Q psy9210 55 DFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKA 113 (234)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPNvY~F~~TtY~~Iy~dL~~kD~~ 113 (234)
+-+.+..|.+-.|++.- ..+|=|. .=+...|+++|++|.+.=++
T Consensus 101 ~~~~~~~p~~~~k~~~~--------w~VpDPy-------~~~~~~F~~v~d~I~~~v~~ 144 (148)
T 3rh0_A 101 DDAQVDMPESAQGALER--------WSIEEPD-------AQGMERMRIVRDQIDNRVQA 144 (148)
T ss_dssp SSCCCCCCTTCCSEEEE--------ECCCCCS-------CCHHHHHHHHHHHHHHHHHH
T ss_pred ChHHhhCccCCCCEeec--------CCcCCCC-------CCCHHHHHHHHHHHHHHHHH
Confidence 77888888876665211 1233332 11112577788777765443
No 18
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=94.26 E-value=0.021 Score=45.60 Aligned_cols=40 Identities=33% Similarity=0.435 Sum_probs=32.5
Q ss_pred CCCceEEEEecCCCccchHHHHHHhh----CC----CceeeccCCC-CC
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSK----KG----VDVKSFGTGD-KK 41 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k----~G----~~V~SfGTG~-~v 41 (234)
|...||-.||..|-=||--|.++|++ +| +.|.|-||+. ++
T Consensus 2 ~~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~ 50 (161)
T 3jvi_A 2 PGSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHE 50 (161)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTT
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCccc
Confidence 45689999999999999999888776 33 6899999998 44
No 19
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=93.68 E-value=0.038 Score=44.87 Aligned_cols=37 Identities=35% Similarity=0.504 Sum_probs=31.7
Q ss_pred ceEEEEecCCCccchHHHHHHhh----CC----CceeeccCCCCC
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSK----KG----VDVKSFGTGDKK 41 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k----~G----~~V~SfGTG~~v 41 (234)
+||-+||.-|-=||--|.++|++ +| +.|.|-||+..-
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~ 63 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWH 63 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTT
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCC
Confidence 69999999999999999998865 44 689999998753
No 20
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=93.49 E-value=0.06 Score=43.84 Aligned_cols=39 Identities=28% Similarity=0.370 Sum_probs=32.6
Q ss_pred CCceEEEEecCCCccchHHHHHHhhC------CCceeeccCCCCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKK------GVDVKSFGTGDKK 41 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~------G~~V~SfGTG~~v 41 (234)
.++||-+||.-|--||--|.++|+.+ .+.|.|-||+...
T Consensus 33 ~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~ 77 (180)
T 4egs_A 33 GSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPE 77 (180)
T ss_dssp -CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCT
T ss_pred CCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcC
Confidence 46899999999999999999988642 4789999998654
No 21
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=93.28 E-value=0.051 Score=44.80 Aligned_cols=38 Identities=29% Similarity=0.421 Sum_probs=33.4
Q ss_pred CceEEEEecCCCccchHHHHHHhhC------CCceeeccCCCCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKK------GVDVKSFGTGDKK 41 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~------G~~V~SfGTG~~v 41 (234)
+.||-+||..|-=||--|.++|++. ++.|.|-||+...
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCcC
Confidence 5799999999999999999998874 7899999998643
No 22
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=92.39 E-value=0.1 Score=41.43 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=31.6
Q ss_pred eEEEEecCCCccchHHHHHHhhC--------CCceeeccCCCCC
Q psy9210 6 KVAVVCSSNMNRSMEAHAYLSKK--------GVDVKSFGTGDKK 41 (234)
Q Consensus 6 k~AvVCsSN~NRSMEAH~~L~k~--------G~~V~SfGTG~~v 41 (234)
||-.||..|-=||--|.++|++. .+.|.|-||+..-
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~ 46 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEH 46 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcc
Confidence 89999999999999999998864 3789999999853
No 23
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=89.77 E-value=0.29 Score=35.92 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=28.3
Q ss_pred CCCceEEEEecCCCccchHHHHHHhhCCCceeec
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSF 35 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~Sf 35 (234)
|..-.+.++|.| -+||..|-..|.++||++.+.
T Consensus 54 ~~~~~ivv~C~~-G~rS~~aa~~L~~~G~~~~~l 86 (103)
T 3iwh_A 54 NKNEIYYIVCAG-GVRSAKVVEYLEANGIDAVNV 86 (103)
T ss_dssp CTTSEEEEECSS-SSHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCeEEEECCC-CHHHHHHHHHHHHcCCCEEEe
Confidence 345678999987 589999999999999998876
No 24
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=89.00 E-value=0.31 Score=34.42 Aligned_cols=35 Identities=26% Similarity=0.519 Sum_probs=29.4
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCCceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG 38 (234)
..-+|-++|.|. +||..|-..|++.||+|..+--|
T Consensus 55 ~~~~ivvyC~~g-~rs~~a~~~L~~~G~~v~~l~GG 89 (100)
T 3foj_A 55 DNETYYIICKAG-GRSAQVVQYLEQNGVNAVNVEGG 89 (100)
T ss_dssp TTSEEEEECSSS-HHHHHHHHHHHTTTCEEEEETTH
T ss_pred CCCcEEEEcCCC-chHHHHHHHHHHCCCCEEEeccc
Confidence 345789999875 89999999999999999988544
No 25
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=87.83 E-value=0.38 Score=34.74 Aligned_cols=35 Identities=34% Similarity=0.592 Sum_probs=29.2
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCCceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG 38 (234)
..-+|.++|.|. +||..|-..|++.||+|..+--|
T Consensus 54 ~~~~ivvyC~~G-~rs~~aa~~L~~~G~~v~~l~GG 88 (108)
T 3gk5_A 54 RDKKYAVICAHG-NRSAAAVEFLSQLGLNIVDVEGG 88 (108)
T ss_dssp TTSCEEEECSSS-HHHHHHHHHHHTTTCCEEEETTH
T ss_pred CCCeEEEEcCCC-cHHHHHHHHHHHcCCCEEEEcCc
Confidence 345789999764 89999999999999999988544
No 26
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=86.85 E-value=0.61 Score=32.94 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=29.2
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCCceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG 38 (234)
..-.|-++|.+. +||..|=..|.+.||+|..+--|
T Consensus 55 ~~~~iv~yC~~g-~rs~~a~~~L~~~G~~v~~l~GG 89 (103)
T 3eme_A 55 KNEIYYIVCAGG-VRSAKVVEYLEANGIDAVNVEGG 89 (103)
T ss_dssp TTSEEEEECSSS-SHHHHHHHHHHTTTCEEEEETTH
T ss_pred CCCeEEEECCCC-hHHHHHHHHHHHCCCCeEEeCCC
Confidence 345788999876 89999999999999999887444
No 27
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=86.80 E-value=0.57 Score=35.75 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=31.6
Q ss_pred CCceEEEEecCCC-ccchHHHHHHhhCCCceeeccCCC
Q psy9210 3 SNLKVAVVCSSNM-NRSMEAHAYLSKKGVDVKSFGTGD 39 (234)
Q Consensus 3 s~lk~AvVCsSN~-NRSMEAH~~L~k~G~~V~SfGTG~ 39 (234)
..-+|-|+|.+.. +||..|-..|++.||+|..+--|-
T Consensus 71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~G~~v~~l~GG~ 108 (144)
T 3nhv_A 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGI 108 (144)
T ss_dssp TTSEEEEECSCTTCCHHHHHHHHHHHTTCEEEEEESHH
T ss_pred CCCeEEEEECCCCccHHHHHHHHHHHCCCeEEEeCCcH
Confidence 3457899999987 999999999999999999886553
No 28
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=86.64 E-value=0.41 Score=34.33 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=29.7
Q ss_pred ceEEEEecCCCccchHHHHHHhhCCCceeeccCC
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG 38 (234)
-+|.|+|+...+||..|=..|++.||+|..+--|
T Consensus 90 ~~ivvyC~~~G~rs~~a~~~L~~~G~~v~~l~GG 123 (134)
T 3g5j_A 90 DNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEGG 123 (134)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHHTTCCCEEETTH
T ss_pred CeEEEEECCCChHHHHHHHHHHHcCCceEEEeCc
Confidence 5788999867799999999999999999988655
No 29
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=86.21 E-value=0.76 Score=31.35 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=27.6
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCC-ceeecc
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFG 36 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfG 36 (234)
..-+|-++|.+. +||..|=..|++.|| +|...|
T Consensus 40 ~~~~ivv~C~~g-~rs~~aa~~L~~~G~~~v~~lG 73 (85)
T 2jtq_A 40 KNDTVKVYCNAG-RQSGQAKEILSEMGYTHVENAG 73 (85)
T ss_dssp TTSEEEEEESSS-HHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCcEEEEcCCC-chHHHHHHHHHHcCCCCEEecc
Confidence 345799999874 799999999999999 587773
No 30
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=85.36 E-value=1 Score=33.48 Aligned_cols=42 Identities=14% Similarity=0.275 Sum_probs=32.6
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCCCCCCcccc
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGDKKPQQWE 46 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG~~v~~~~~ 46 (234)
.-.|.|+|.|. +||..|=..|.+.|| +|.++--|-.-...|.
T Consensus 74 ~~~ivv~C~sG-~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~ 116 (134)
T 1vee_A 74 NTTLYILDKFD-GNSELVAELVALNGFKSAYAIKDGAEGPRGWL 116 (134)
T ss_dssp GCEEEEECSSS-TTHHHHHHHHHHHTCSEEEECTTTTTSTTSSG
T ss_pred CCEEEEEeCCC-CcHHHHHHHHHHcCCcceEEecCCccCCcchh
Confidence 35689999987 699999999999999 6999866643224564
No 31
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=82.45 E-value=1.4 Score=33.13 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=29.0
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
..-.|.|+|.|. +||..|=..|.+.|| +|..+--|
T Consensus 81 ~~~~ivvyC~~G-~rS~~aa~~L~~~G~~~v~~l~GG 116 (137)
T 1qxn_A 81 PEKPVVVFCKTA-ARAALAGKTLREYGFKTIYNSEGG 116 (137)
T ss_dssp TTSCEEEECCSS-SCHHHHHHHHHHHTCSCEEEESSC
T ss_pred CCCeEEEEcCCC-cHHHHHHHHHHHcCCcceEEEcCc
Confidence 345789999886 599999999999999 69888544
No 32
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=81.45 E-value=1.1 Score=31.25 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=27.9
Q ss_pred ceEEEEecCCCccchHHHHHHhhCCCceeeccCC
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG 38 (234)
-+|-++|.+. +||..|=..|++.||+|..+--|
T Consensus 54 ~~ivvyC~~g-~rs~~a~~~L~~~G~~v~~l~GG 86 (94)
T 1wv9_A 54 RPLLLVCEKG-LLSQVAALYLEAEGYEAMSLEGG 86 (94)
T ss_dssp SCEEEECSSS-HHHHHHHHHHHHHTCCEEEETTG
T ss_pred CCEEEEcCCC-ChHHHHHHHHHHcCCcEEEEccc
Confidence 4688999885 69999999999999998877544
No 33
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=80.67 E-value=1.3 Score=32.68 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=28.6
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|.++|.+ .+||..|-..|.+.|| +|..+--|
T Consensus 91 ~~~ivvyC~~-G~rs~~aa~~L~~~G~~~v~~l~GG 125 (139)
T 3d1p_A 91 AKELIFYCAS-GKRGGEAQKVASSHGYSNTSLYPGS 125 (139)
T ss_dssp TSEEEEECSS-SHHHHHHHHHHHTTTCCSEEECTTH
T ss_pred CCeEEEECCC-CchHHHHHHHHHHcCCCCeEEeCCc
Confidence 4578999998 5899999999999999 58887544
No 34
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=80.28 E-value=1.8 Score=32.66 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=28.8
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGD 39 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG~ 39 (234)
.-+|.|+|.|. +||..|=..|++.|| +|..+--|-
T Consensus 80 ~~~ivvyC~~G-~rS~~aa~~L~~~G~~~v~~l~GG~ 115 (148)
T 2fsx_A 80 ERPVIFLCRSG-NRSIGAAEVATEAGITPAYNVLDGF 115 (148)
T ss_dssp -CCEEEECSSS-STHHHHHHHHHHTTCCSEEEETTTT
T ss_pred CCEEEEEcCCC-hhHHHHHHHHHHcCCcceEEEcCCh
Confidence 35689999885 799999999999999 699985553
No 35
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=79.53 E-value=1.4 Score=31.23 Aligned_cols=35 Identities=34% Similarity=0.433 Sum_probs=28.3
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
..-.|.++|.+. +||..|-..|++.|| +|..+--|
T Consensus 57 ~~~~ivvyc~~g-~rs~~a~~~L~~~G~~~v~~l~GG 92 (108)
T 1gmx_A 57 FDTPVMVMCYHG-NSSKGAAQYLLQQGYDVVYSIDGG 92 (108)
T ss_dssp TTSCEEEECSSS-SHHHHHHHHHHHHTCSSEEEETTH
T ss_pred CCCCEEEEcCCC-chHHHHHHHHHHcCCceEEEecCC
Confidence 345688999875 599999999999999 58877544
No 36
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=76.14 E-value=2 Score=31.77 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=28.8
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
..-+|.++|.|. +||..|=..|.+.|| +|..+--|
T Consensus 81 ~~~~ivvyC~~G-~rs~~aa~~L~~~G~~~v~~l~GG 116 (129)
T 1tq1_A 81 QSDNIIVGCQSG-GRSIKATTDLLHAGFTGVKDIVGG 116 (129)
T ss_dssp TTSSEEEEESSC-SHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CCCeEEEECCCC-cHHHHHHHHHHHcCCCCeEEeCCc
Confidence 345789999975 799999999999999 58887544
No 37
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=74.54 E-value=2 Score=30.70 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=27.4
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|.++|.+ .+||..|-..|.+.|| +|..+--|
T Consensus 52 ~~~ivvyc~~-g~rs~~a~~~L~~~G~~~v~~l~GG 86 (106)
T 3hix_A 52 SRDIYVYGAG-DEQTSQAVNLLRSAGFEHVSELKGG 86 (106)
T ss_dssp TSCEEEECSS-HHHHHHHHHHHHHTTCSCEEECTTH
T ss_pred CCeEEEEECC-CChHHHHHHHHHHcCCcCEEEecCC
Confidence 4468899987 5789999999999999 58776433
No 38
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=73.04 E-value=3.2 Score=30.38 Aligned_cols=35 Identities=11% Similarity=-0.004 Sum_probs=28.2
Q ss_pred CCceEEEEecCCCcc--chHHHHHHhhCCCceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNR--SMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NR--SMEAH~~L~k~G~~V~SfGTG 38 (234)
..-+|-++|.+.. | |..|=..|++.||+|..+--|
T Consensus 70 ~~~~ivvyC~~g~-r~~s~~a~~~L~~~G~~v~~l~GG 106 (124)
T 3flh_A 70 PAKTYVVYDWTGG-TTLGKTALLVLLSAGFEAYELAGA 106 (124)
T ss_dssp TTSEEEEECSSSS-CSHHHHHHHHHHHHTCEEEEETTH
T ss_pred CCCeEEEEeCCCC-chHHHHHHHHHHHcCCeEEEeCCc
Confidence 3457889998864 5 899999999999998887444
No 39
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=72.83 E-value=2 Score=31.48 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=28.6
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-+|-|+|.+. +||..|-..|.+.|| +|..+--|
T Consensus 86 ~~~ivvyC~~G-~rs~~a~~~L~~~G~~~v~~l~GG 120 (139)
T 2hhg_A 86 DKKFVFYCAGG-LRSALAAKTAQDMGLKPVAHIEGG 120 (139)
T ss_dssp SSEEEEECSSS-HHHHHHHHHHHHHTCCSEEEETTH
T ss_pred CCeEEEECCCC-hHHHHHHHHHHHcCCCCeEEecCC
Confidence 45789999986 799999999999999 59888544
No 40
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=71.21 E-value=5 Score=29.56 Aligned_cols=40 Identities=20% Similarity=0.513 Sum_probs=30.0
Q ss_pred CCCceEEEEecCCCccchHHHH---HHhhCCCc--eeeccCCCCC
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHA---YLSKKGVD--VKSFGTGDKK 41 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~---~L~k~G~~--V~SfGTG~~v 41 (234)
|..+|+.+||++.+--||=+-+ .+++.|++ |...+.++.-
T Consensus 2 ~~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~~ 46 (109)
T 2l2q_A 2 PGSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRLS 46 (109)
T ss_dssp CCCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHH
T ss_pred CCceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHHHH
Confidence 6678999999999999987654 46678875 6666666543
No 41
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=67.95 E-value=3.4 Score=31.40 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=28.4
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
..-.|.++|.+. +||..|=..|.+.|| +|..+-.|
T Consensus 55 ~~~~ivvyC~~g-~rs~~aa~~L~~~G~~~v~~l~GG 90 (141)
T 3ilm_A 55 KSRDIYVYGAGD-EQTSQAVNLLRSAGFEHVSELKGG 90 (141)
T ss_dssp TTSEEEEECSSH-HHHHHHHHHHHHTTCCSEEECTTH
T ss_pred CCCeEEEEECCC-hHHHHHHHHHHHcCCCCEEEecCH
Confidence 345688999965 899999999999999 58877544
No 42
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=62.47 E-value=7.3 Score=27.85 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=26.1
Q ss_pred CCceEEEEecCCCccchHHHHHHhhCCCceeec
Q psy9210 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSF 35 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~Sf 35 (234)
..-+|.++|.+. +||..|=..|++.||+...+
T Consensus 55 ~~~~ivvyC~~G-~rs~~aa~~L~~~G~~~~~l 86 (110)
T 2k0z_A 55 KDKKVLLHCRAG-RRALDAAKSMHELGYTPYYL 86 (110)
T ss_dssp SSSCEEEECSSS-HHHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEEEeCCC-chHHHHHHHHHHCCCCEEEe
Confidence 345689999875 79999999999999976444
No 43
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=57.38 E-value=11 Score=31.39 Aligned_cols=32 Identities=38% Similarity=0.244 Sum_probs=22.9
Q ss_pred eEEEEecCCCccc------h----HHHHHHhhCCCceeeccCC
Q psy9210 6 KVAVVCSSNMNRS------M----EAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 6 k~AvVCsSN~NRS------M----EAH~~L~k~G~~V~SfGTG 38 (234)
+|||+|+|+.+.. . |.=+.|.++|+.|.| |-|
T Consensus 25 ~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs-Gg~ 66 (195)
T 1rcu_A 25 KVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN-GGR 66 (195)
T ss_dssp EEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE-CCS
T ss_pred eEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe-CCH
Confidence 6999999876422 1 223468889999999 743
No 44
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=53.56 E-value=9.2 Score=29.05 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=28.5
Q ss_pred ceEEEEecCCC--------ccchHHHHHHhhCCCceeeccCC
Q psy9210 5 LKVAVVCSSNM--------NRSMEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsSN~--------NRSMEAH~~L~k~G~~V~SfGTG 38 (234)
-.|-|.|.+.. .||.-|-..|.+.||+|..+--|
T Consensus 94 ~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~~v~~L~GG 135 (158)
T 3tg1_B 94 KEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGG 135 (158)
T ss_dssp SCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTCCEEEETTH
T ss_pred CeEEEEECCCCcccccCcchHHHHHHHHHHhCCCcEEEeCCc
Confidence 46889999886 57999999999999999987444
No 45
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=52.07 E-value=12 Score=30.28 Aligned_cols=35 Identities=11% Similarity=-0.060 Sum_probs=28.7
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|-|+|.+...||..|-..|++.|+ +|...-.|
T Consensus 81 ~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG 116 (271)
T 1e0c_A 81 EAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGG 116 (271)
T ss_dssp TCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTH
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCC
Confidence 456888998876699999999999999 58876544
No 46
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=51.62 E-value=17 Score=27.76 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=27.1
Q ss_pred CceEEEEecCCCccchHHHHHHh--------hCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLS--------KKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~--------k~G~-~V~SfGTG 38 (234)
.-+|.|+|.+..+||..|=..|. +.|| +|..+--|
T Consensus 85 ~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG 128 (152)
T 1t3k_A 85 KDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERG 128 (152)
T ss_dssp CCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESST
T ss_pred CCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 45688999866889998888774 4899 78877555
No 47
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=47.62 E-value=16 Score=30.35 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=28.0
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|.|.|.| -+||..|=..|.+.|| +|..|--|
T Consensus 240 ~~~ivv~C~s-G~rs~~a~~~L~~~G~~~v~~~~GG 274 (296)
T 1rhs_A 240 TKPLIATCRK-GVTACHIALAAYLCGKPDVAIYDGS 274 (296)
T ss_dssp TSCEEEECSS-SSTHHHHHHHHHHTTCCCCEEESSH
T ss_pred CCCEEEECCc-HHHHHHHHHHHHHcCCCCceeeCCc
Confidence 3568999998 4799999999999999 59888544
No 48
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=46.31 E-value=13 Score=28.39 Aligned_cols=34 Identities=9% Similarity=0.196 Sum_probs=25.3
Q ss_pred ceEEEE--ecCCCccchHHHHHHhhC----------CC-ceeeccCC
Q psy9210 5 LKVAVV--CSSNMNRSMEAHAYLSKK----------GV-DVKSFGTG 38 (234)
Q Consensus 5 lk~AvV--CsSN~NRSMEAH~~L~k~----------G~-~V~SfGTG 38 (234)
-.+.|| |....+||..|=..|+++ || +|..+--|
T Consensus 90 ~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG 136 (175)
T 2a2k_A 90 KRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGG 136 (175)
T ss_dssp CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTH
T ss_pred CCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCC
Confidence 456666 664578999999988864 98 78877555
No 49
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=46.30 E-value=16 Score=27.42 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=25.0
Q ss_pred ceEEEE--ecCCCccchHHHHHHhhC----------CC-ceeeccCC
Q psy9210 5 LKVAVV--CSSNMNRSMEAHAYLSKK----------GV-DVKSFGTG 38 (234)
Q Consensus 5 lk~AvV--CsSN~NRSMEAH~~L~k~----------G~-~V~SfGTG 38 (234)
-++.|| |....+||..|=..|+++ || +|..+--|
T Consensus 88 ~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG 134 (161)
T 1c25_A 88 KRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGG 134 (161)
T ss_dssp SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTH
T ss_pred CCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCC
Confidence 355555 875678999999999864 98 78877544
No 50
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=44.33 E-value=15 Score=29.78 Aligned_cols=35 Identities=23% Similarity=0.113 Sum_probs=28.4
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|-|+|.+...||..|-..|+..|| +|..+-.|
T Consensus 77 ~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG 112 (277)
T 3aay_A 77 EDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGG 112 (277)
T ss_dssp TSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTH
T ss_pred CCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCC
Confidence 356889998875679999999999999 78877544
No 51
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=40.37 E-value=19 Score=28.60 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=27.8
Q ss_pred ceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
-.|-++|.+...||..|-..|+ .|| +|..+-.|
T Consensus 62 ~~ivvyc~~g~~~s~~a~~~L~-~G~~~v~~l~GG 95 (230)
T 2eg4_A 62 SPVVLYDEGLTSRLCRTAFFLG-LGGLEVQLWTEG 95 (230)
T ss_dssp SSEEEECSSSCHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CEEEEEcCCCCccHHHHHHHHH-cCCceEEEeCCC
Confidence 4578899887679999999999 999 59888767
No 52
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=39.18 E-value=19 Score=27.04 Aligned_cols=34 Identities=15% Similarity=0.294 Sum_probs=24.2
Q ss_pred HHHHHHHhhcch-hhHHHHHHHHHHHHHHcCCCce
Q psy9210 195 ASELMSMFIKCE-DLDNEIDEIMQEFEEKCSRPLL 228 (234)
Q Consensus 195 i~eL~~~l~~~e-Dld~~ideil~~feek~~r~~L 228 (234)
+++|.+.|.+++ +.|.+.|.+|..|++-+..|--
T Consensus 15 fi~lv~~I~~~~~~~e~e~d~ll~~f~~~teHP~g 49 (86)
T 1fr2_A 15 FLQLVTTICNADTSSEEELVKLVTHFAEMTEHPSG 49 (86)
T ss_dssp HHHHHHHHHTTCSSSHHHHHHHHHHHHHHHCCTTT
T ss_pred HHHHHHHHHhCCCCChHHHHHHHHHHHHhcCCCCc
Confidence 456777777776 6777778888888877766643
No 53
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=39.13 E-value=24 Score=32.18 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=28.8
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCCceeeccC-CC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGT-GD 39 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGT-G~ 39 (234)
.-+|-++|.+. +||..|=..|++.||+|..+-- |-
T Consensus 322 ~~~ivv~c~~g-~rs~~aa~~L~~~G~~v~~l~G~G~ 357 (539)
T 1yt8_A 322 GARLVLVDDDG-VRANMSASWLAQMGWQVAVLDGLSE 357 (539)
T ss_dssp TCEEEEECSSS-SHHHHHHHHHHHTTCEEEEECSCCG
T ss_pred CCeEEEEeCCC-CcHHHHHHHHHHcCCeEEEecCCCh
Confidence 35788999865 8999999999999999998754 53
No 54
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=38.54 E-value=16 Score=25.75 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=25.6
Q ss_pred eEEEEecCCCccchHHHHHHhhC------CC-ceeeccCC
Q psy9210 6 KVAVVCSSNMNRSMEAHAYLSKK------GV-DVKSFGTG 38 (234)
Q Consensus 6 k~AvVCsSN~NRSMEAH~~L~k~------G~-~V~SfGTG 38 (234)
.|.|+|.+. +||..|-..|.+. |+ +|..+--|
T Consensus 74 ~ivv~C~~G-~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG 112 (127)
T 3i2v_A 74 PIYVICKLG-NDSQKAVKILQSLSAAQELDPLTVRDVVGG 112 (127)
T ss_dssp EEEEECSSS-SHHHHHHHHHHHHHHTTSSSCEEEEEETTH
T ss_pred eEEEEcCCC-CcHHHHHHHHHHhhccccCCCceEEEecCC
Confidence 789999874 7999999999999 44 78777444
No 55
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=38.52 E-value=18 Score=27.34 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=23.2
Q ss_pred EEEEecCCCccchHHH----HHHhhCCC---ceeeccCC
Q psy9210 7 VAVVCSSNMNRSMEAH----AYLSKKGV---DVKSFGTG 38 (234)
Q Consensus 7 ~AvVCsSN~NRSMEAH----~~L~k~G~---~V~SfGTG 38 (234)
|-+.|....+||..|= ..|.+.|| +|..+--|
T Consensus 71 vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG 109 (152)
T 2j6p_A 71 AVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGG 109 (152)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCc
Confidence 3344965678998886 77888998 68877555
No 56
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=38.46 E-value=70 Score=25.74 Aligned_cols=73 Identities=10% Similarity=0.118 Sum_probs=45.0
Q ss_pred hhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhh---cchhhHHHHHHHHHHHHHHcCCCcee
Q psy9210 153 RVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFI---KCEDLDNEIDEIMQEFEEKCSRPLLH 229 (234)
Q Consensus 153 RvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~---~~eDld~~ideil~~feek~~r~~Lh 229 (234)
+-....+|+++. +++...+||.++-.|-+-+++.|.-.+. +|...=. -.--+-...-..+...-++.+.|++-
T Consensus 29 ~g~~lAv~~iN~-~GGi~Gr~ielv~~D~~~~p~~a~~~a~---~li~~~~v~~i~g~~~s~~~~a~~~~~~~~~vp~i~ 104 (353)
T 4gnr_A 29 KGAQLAVDEINA-AGGIDGKQIEVVDKDNKSETAEAASVTT---NLVTQSKVSAVVGPATSGATAAAVANATKAGVPLIS 104 (353)
T ss_dssp HHHHHHHHHHHH-TTCBTTBEEEEEEEECTTCHHHHHHHHH---HHHHTSCCSEEECCCSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHh-cCCCCCeEEEEEEecCCCCHHHHHHHHH---HHHhhCCceEEeccccCcccceehhhhhccCcceEe
Confidence 445677899988 7888899999998888888777755544 3332100 00012233344455566667777664
No 57
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=35.69 E-value=24 Score=29.44 Aligned_cols=40 Identities=25% Similarity=0.343 Sum_probs=27.8
Q ss_pred CCCceEEEEecCC-CccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 2 PSNLKVAVVCSSN-MNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 2 ~s~lk~AvVCsSN-~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
|.++|||+-|=-. ..--.+.-.+|+++|+.|.-|||-+.-
T Consensus 19 ~~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~ 59 (166)
T 3s5p_A 19 PGSMKVAFASDHGGRDLRMFLQQRASAHGYEVMDLGTESDA 59 (166)
T ss_dssp CTTCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEEC----
T ss_pred CCceEEEEEECchHHHHHHHHHHHHHHCCCEEEEcCCCCCC
Confidence 6678888877554 233456678899999999999997643
No 58
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=34.52 E-value=41 Score=27.08 Aligned_cols=48 Identities=6% Similarity=-0.056 Sum_probs=37.2
Q ss_pred chhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHH
Q psy9210 152 ERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200 (234)
Q Consensus 152 ERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~ 200 (234)
+.-+...+|++++ +++....++.++-.|-+++..++..++..+++|.+
T Consensus 20 ~~a~~~Av~~iN~-~~~ilg~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 67 (389)
T 4gpa_A 20 YTAFRLAIFLHNT-SPNASEAPFNLVPHVDNIETANSFAVTNAFCSQYS 67 (389)
T ss_dssp HHHHHHHHHHHHT-CSCTTTCSSEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCCCCCEEEEEEEecCCCchHHHHHHHHHHHHh
Confidence 4567788999998 77777788888877777777888888887777654
No 59
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=33.91 E-value=40 Score=29.06 Aligned_cols=35 Identities=20% Similarity=0.274 Sum_probs=29.3
Q ss_pred CCceEEEEecCCCccch-----HHHHHHhhCCCceeeccC
Q psy9210 3 SNLKVAVVCSSNMNRSM-----EAHAYLSKKGVDVKSFGT 37 (234)
Q Consensus 3 s~lk~AvVCsSN~NRSM-----EAH~~L~k~G~~V~SfGT 37 (234)
..+|||+-|-..+.--. +.-.+|.++|+.|.-|||
T Consensus 2 ~~MkIaigsDha~~lK~~~i~~~l~~~L~~~G~eV~D~G~ 41 (214)
T 3ono_A 2 NAMKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFNVGM 41 (214)
T ss_dssp CCCEEEECCCGGGGGGHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CccEEEEECCCcHHHHChhHHHHHHHHHHHCCCEEEEcCC
Confidence 56899999987766556 677899999999999995
No 60
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=33.89 E-value=40 Score=27.86 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=22.8
Q ss_pred CCceEEEEecCCCccc------hHHHHHHhhCCCceeec
Q psy9210 3 SNLKVAVVCSSNMNRS------MEAHAYLSKKGVDVKSF 35 (234)
Q Consensus 3 s~lk~AvVCsSN~NRS------MEAH~~L~k~G~~V~Sf 35 (234)
++.+|||.|+|+.+.+ -|.=+.|.++|+.|.+=
T Consensus 12 ~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~G 50 (189)
T 3sbx_A 12 GRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWG 50 (189)
T ss_dssp -CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEEC
Confidence 4579999999884433 22235788999988764
No 61
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=33.74 E-value=32 Score=29.70 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=27.9
Q ss_pred CceEEEEecCCCccc-----hHHHHHHhhCCCceeeccCCC
Q psy9210 4 NLKVAVVCSSNMNRS-----MEAHAYLSKKGVDVKSFGTGD 39 (234)
Q Consensus 4 ~lk~AvVCsSN~NRS-----MEAH~~L~k~G~~V~SfGTG~ 39 (234)
.+|||+-|-..+.-- -+.-.+|.++|+.|.-|||-+
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~L~~~G~eV~D~G~~s 43 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKGYQLFNYGMRG 43 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEECSCCS
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHHHHHCCCEEEEeCCCC
Confidence 389999986554322 366778999999999999965
No 62
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=33.67 E-value=46 Score=24.64 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=26.9
Q ss_pred CceEEEEecCCCccchHH----HHHHhhCCCc--eeeccCCCC
Q psy9210 4 NLKVAVVCSSNMNRSMEA----HAYLSKKGVD--VKSFGTGDK 40 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEA----H~~L~k~G~~--V~SfGTG~~ 40 (234)
..|+.+||+|.+--|+=+ -+.+++.|++ |...+.++.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~ 63 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEI 63 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTT
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHH
Confidence 468999999999998632 3457778986 466665554
No 63
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=33.54 E-value=27 Score=25.71 Aligned_cols=35 Identities=31% Similarity=0.433 Sum_probs=26.1
Q ss_pred CceEEEEecCCCccchHHH----HHHhhCCCc---eeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAH----AYLSKKGVD---VKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH----~~L~k~G~~---V~SfGTG 38 (234)
..|+.+||++.+--|+=+- +.+++.|++ |...+.+
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~ 59 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVG 59 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHH
Confidence 3689999999999997665 677788986 4444433
No 64
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=33.53 E-value=30 Score=28.17 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=22.4
Q ss_pred eEEEEecCCCccc-------hHHHHHHhhCCCceeecc
Q psy9210 6 KVAVVCSSNMNRS-------MEAHAYLSKKGVDVKSFG 36 (234)
Q Consensus 6 k~AvVCsSN~NRS-------MEAH~~L~k~G~~V~SfG 36 (234)
+|||+|||+...+ -|.=+.|.++|+.|.|=|
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 6999999996332 223356888999998754
No 65
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=33.49 E-value=43 Score=27.91 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=22.1
Q ss_pred CceEEEEecCCCccc------hHHHHHHhhCCCceeec
Q psy9210 4 NLKVAVVCSSNMNRS------MEAHAYLSKKGVDVKSF 35 (234)
Q Consensus 4 ~lk~AvVCsSN~NRS------MEAH~~L~k~G~~V~Sf 35 (234)
..+|||+|+|+.+.+ -|.=+.|+++|+.|.+=
T Consensus 22 ~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~G 59 (199)
T 3qua_A 22 QWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSG 59 (199)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 368999999983322 12235788899998663
No 66
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=33.39 E-value=1.6e+02 Score=23.07 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=38.0
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+.....-..+.+.|.. ..-||.++.- -.++.++.. ..+..|++.+.+ ++.+-+++++-+++.
T Consensus 59 ~PDLIi~~~~~~~~~~~~~L~~-----~gipvv~~~~-~~~~~~~~~---~~i~~lg~~~g~~~~A~~~~~~~~~~~~~~ 129 (256)
T 2r7a_A 59 RPDSVITWQDAGPQIVLDQLRA-----QKVNVVTLPR-VPATLEQMY---ANIRQLAKTLQVPEQGDALVTQINQRLERV 129 (256)
T ss_dssp CCSEEEEETTCSCHHHHHHHHH-----TTCEEEEECC-CSCCHHHHH---HHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCHHHHHHHHH-----cCCcEEEecC-CCCCHHHHH---HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5799998754222456666655 3447766532 112443322 234445555543 344555556666666
Q ss_pred HHHc
Q psy9210 220 EEKC 223 (234)
Q Consensus 220 eek~ 223 (234)
.++.
T Consensus 130 ~~~~ 133 (256)
T 2r7a_A 130 QQNV 133 (256)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6655
No 67
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=32.93 E-value=32 Score=28.80 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=23.4
Q ss_pred ceEEEEecCCCcc-------chHHHHHHhhCCCceeecc
Q psy9210 5 LKVAVVCSSNMNR-------SMEAHAYLSKKGVDVKSFG 36 (234)
Q Consensus 5 lk~AvVCsSN~NR-------SMEAH~~L~k~G~~V~SfG 36 (234)
.+|||+|||+... .-+.=+.|.++|+.|.|=|
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGG 76 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGG 76 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 4799999999854 1333456788999998733
No 68
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=32.92 E-value=33 Score=27.39 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=22.9
Q ss_pred eEEEEecCCCccc-------hHHHHHHhhCCCceeecc
Q psy9210 6 KVAVVCSSNMNRS-------MEAHAYLSKKGVDVKSFG 36 (234)
Q Consensus 6 k~AvVCsSN~NRS-------MEAH~~L~k~G~~V~SfG 36 (234)
+|||+|||+...+ -+-=+.|.++|+.|.|=|
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Gg 40 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGG 40 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECC
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 6999999997531 233456888999998755
No 69
>2fb7_A SM-like protein, LSM-14_N (RAP55); DR.13312, BC055387, AAH55387, stronGly BENT five-stranded antiparallel beta- sheet, structural genomics, PSI; NMR {Danio rerio} SCOP: b.38.1.5 PDB: 2vxf_A
Probab=32.78 E-value=23 Score=27.54 Aligned_cols=27 Identities=33% Similarity=0.550 Sum_probs=19.6
Q ss_pred EEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 8 AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
++.++-|...|+=| | -+|+||||-...
T Consensus 34 GiL~~In~~~sTia---L----~nVRsfGTEgR~ 60 (95)
T 2fb7_A 34 GILYTIDTENSTVA---L----AKVRSFGTEDRP 60 (95)
T ss_dssp EEEEEEETTTTEEE---E----ESCCCCSCCSSS
T ss_pred EEEecccCccCEEE---E----EeeeEecccCCC
Confidence 56677777766533 3 389999999887
No 70
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=32.38 E-value=1.8e+02 Score=24.19 Aligned_cols=68 Identities=10% Similarity=0.144 Sum_probs=38.7
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+... .....+.|.. .+-||.+++. ++.++. ...+..|.+.+.+ ++.+-+++++-+++.
T Consensus 116 ~PDLIi~~~~--~~~~~~~L~~-----~gipvv~~~~---~~~~~~---~~~i~~lg~~lg~e~~A~~li~~~~~~~~~i 182 (335)
T 4hn9_A 116 TPDVVFLPMK--LKKTADTLES-----LGIKAVVVNP---EDQSLL---EECITLVGKITNNAGRAEALNNSIKTFLADN 182 (335)
T ss_dssp CCSEEEEEGG--GHHHHHHHHH-----TTCCEEEECC---CSHHHH---HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCc--chhHHHHHHH-----cCCCEEEEcC---CCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 5899999764 3566666665 3468877753 233322 1334455555543 344555555666666
Q ss_pred HHHc
Q psy9210 220 EEKC 223 (234)
Q Consensus 220 eek~ 223 (234)
.++.
T Consensus 183 ~~~~ 186 (335)
T 4hn9_A 183 KTNV 186 (335)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 5543
No 71
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=31.87 E-value=30 Score=28.16 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=24.2
Q ss_pred CceEEEEecCCCccc-------hHHHHHHhhCCCceeeccC
Q psy9210 4 NLKVAVVCSSNMNRS-------MEAHAYLSKKGVDVKSFGT 37 (234)
Q Consensus 4 ~lk~AvVCsSN~NRS-------MEAH~~L~k~G~~V~SfGT 37 (234)
..+|||+||++...+ -|.=+.|.++|+.|.|=|.
T Consensus 13 ~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg 53 (176)
T 2iz6_A 13 KPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGR 53 (176)
T ss_dssp CCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 468999999993323 1223468899999998665
No 72
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=30.86 E-value=50 Score=24.38 Aligned_cols=38 Identities=21% Similarity=0.178 Sum_probs=27.8
Q ss_pred CceEEEEecCCCccchHHH---HHHhhCCCce--eeccCCCCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAH---AYLSKKGVDV--KSFGTGDKK 41 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH---~~L~k~G~~V--~SfGTG~~v 41 (234)
..||-++|++-+-.||=+- ..++++|+++ ...+.++..
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~ 45 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAG 45 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTT
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecHHHHH
Confidence 3589999999999998665 4577899864 555555543
No 73
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=30.80 E-value=35 Score=24.22 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=24.5
Q ss_pred ceEEEEecCCCccc---------hHHHHHHhhCCCceeeccCC
Q psy9210 5 LKVAVVCSSNMNRS---------MEAHAYLSKKGVDVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsSN~NRS---------MEAH~~L~k~G~~V~SfGTG 38 (234)
-.|-|.|.+.. || ..|-..|.+.||+|..+--|
T Consensus 84 ~~ivvyc~~g~-~~~~~~~~~~~~~~~~~L~~~G~~v~~l~GG 125 (142)
T 2ouc_A 84 KEIIVYDENTN-EPSRVMPSQPLHIVLESLKREGKEPLVLKGG 125 (142)
T ss_dssp SCEEEECSSCC-CGGGCCTTSHHHHHHHHHHHTTCCCEEETTH
T ss_pred CcEEEEECCCC-chhhcCcccHHHHHHHHHHHcCCcEEEEccC
Confidence 35888998865 43 45777889999999877444
No 74
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=30.67 E-value=24 Score=30.35 Aligned_cols=62 Identities=26% Similarity=0.408 Sum_probs=41.2
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCCCCCCccccceeeeeccccccccccccccceeeee--eeccc
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQ--ISVNL 77 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 77 (234)
.-+|.+.|.+ .+||..|=.+|.+.|| +|..+--|-. .|..- ..+--+++--+-|||. ++|+-
T Consensus 181 dk~IVvyC~~-G~RS~~Aa~~L~~~Gf~nV~~L~GGi~---aW~~~--------~~~~~~~w~G~~fVFD~R~~~~~ 245 (265)
T 4f67_A 181 DKKIAMFCTG-GIRCEKTTAYMKELGFEHVYQLHDGIL---NYLES--------IPESESLWEGKCFVFDDRVAVDQ 245 (265)
T ss_dssp TSCEEEECSS-SHHHHHHHHHHHHHTCSSEEEETTHHH---HHHHH--------SCTTTCCEEECEECSSTTCEECT
T ss_pred CCeEEEEeCC-ChHHHHHHHHHHHcCCCCEEEecCHHH---HHHHh--------cCcccccccCcceeEcCcccccc
Confidence 4579999986 5799999999999999 7988744432 34321 1122245666778874 44443
No 75
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.14 E-value=27 Score=24.01 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=27.6
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
|+++.||.+|-.....| ......|.+.|++|..+.+|...
T Consensus 3 ~~~~~~iLivdd~~~~~-~~l~~~l~~~g~~v~~~~~~~~a 42 (140)
T 3grc_A 3 LAPRPRILICEDDPDIA-RLLNLMLEKGGFDSDMVHSAAQA 42 (140)
T ss_dssp --CCSEEEEECSCHHHH-HHHHHHHHHTTCEEEEECSHHHH
T ss_pred CCCCCCEEEEcCCHHHH-HHHHHHHHHCCCeEEEECCHHHH
Confidence 34567887776544444 35667888999999999888654
No 76
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=29.85 E-value=19 Score=29.25 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=28.2
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-+|.|+|.+..-||..|-..|++.|| +|..+--|
T Consensus 79 ~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG 114 (285)
T 1uar_A 79 DTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGG 114 (285)
T ss_dssp TCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTH
T ss_pred CCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCC
Confidence 457889998865579999999999999 58877544
No 77
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=29.39 E-value=56 Score=26.49 Aligned_cols=34 Identities=26% Similarity=0.225 Sum_probs=27.4
Q ss_pred CceEEEEecCCCcc-chHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNR-SMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NR-SMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|-|.|.+. +| |..|-..|+..|| +|..+--|
T Consensus 86 ~~~ivvyc~~g-~~~a~~a~~~L~~~G~~~v~~l~GG 121 (280)
T 1urh_A 86 DKHLIVYDEGN-LFSAPRAWWMLRTFGVEKVSILGGG 121 (280)
T ss_dssp TSEEEEECSSS-CSSHHHHHHHHHHTTCSCEEEETTH
T ss_pred CCeEEEECCCC-CccHHHHHHHHHHcCCCCEEEecCC
Confidence 34688899885 56 9999999999999 78877544
No 78
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=29.16 E-value=40 Score=29.57 Aligned_cols=34 Identities=24% Similarity=0.455 Sum_probs=28.1
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|.+.|.|. +||..|=..|...|| +|..|--|
T Consensus 358 ~~~ivvyC~sG-~rs~~aa~~L~~~G~~~v~~~~GG 392 (423)
T 2wlr_A 358 EQQVSFYCGTG-WRASETFMYARAMGWKNVSVYDGG 392 (423)
T ss_dssp TSEEEEECSSS-HHHHHHHHHHHHTTCSSEEEESSH
T ss_pred CCcEEEECCcH-HHHHHHHHHHHHcCCCCcceeCcc
Confidence 45788999875 689899899999999 79988544
No 79
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.03 E-value=28 Score=23.98 Aligned_cols=40 Identities=23% Similarity=0.157 Sum_probs=27.8
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
|+.+.||.+|-.....|. ..-..|.+.|+.|..+.+|...
T Consensus 1 M~~~~~iLivdd~~~~~~-~l~~~L~~~g~~v~~~~~~~~a 40 (142)
T 2qxy_A 1 MSLTPTVMVVDESRITFL-AVKNALEKDGFNVIWAKNEQEA 40 (142)
T ss_dssp --CCCEEEEECSCHHHHH-HHHHHHGGGTCEEEEESSHHHH
T ss_pred CCCCCeEEEEeCCHHHHH-HHHHHHHhCCCEEEEECCHHHH
Confidence 677888888876655544 4456678899999988877655
No 80
>2vxe_A CG10686-PA; EDC3, CAR-1, P-bodies, decapping, mRNA decay, LSM proteins, translational repression, transcription; NMR {Drosophila melanogaster}
Probab=28.92 E-value=32 Score=26.36 Aligned_cols=27 Identities=30% Similarity=0.438 Sum_probs=19.3
Q ss_pred EEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 8 AVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 8 AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
++.++-|...|+=| | -+|+||||-...
T Consensus 28 GiL~~In~~~sTi~---L----~nVrsfGTEgR~ 54 (88)
T 2vxe_A 28 GRLYTVDPQECTIA---L----SSVRSFGTEDRD 54 (88)
T ss_dssp EEEEEEETTTTEEE---E----EEEEECCCTTTC
T ss_pred EEEeeecCcccEEE---E----EeeeEecCcCCC
Confidence 56666676666533 2 389999999887
No 81
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=27.24 E-value=68 Score=26.07 Aligned_cols=37 Identities=30% Similarity=0.311 Sum_probs=28.8
Q ss_pred ceEEEEecCC-CccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 5 LKVAVVCSSN-MNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 5 lk~AvVCsSN-~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
+|||+-|--. ..--.+.-.+|.++|+.|.-|||-+.-
T Consensus 2 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~ 39 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSE 39 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTTCEEEECCCCSSS
T ss_pred cEEEEEeCchhHHHHHHHHHHHHHCCCEEEEeCCCCCC
Confidence 6888888444 555667788999999999999996543
No 82
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=27.19 E-value=1.2e+02 Score=23.78 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=27.9
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK 204 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~ 204 (234)
+.|+||+....--...++.|.. .+-||.+++ -.++.++. ...+..|++.+.+
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~-----~gipvv~~~--~~~~~~~~---~~~i~~lg~~~g~ 110 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIAS-----SGVNVVTVP--GQTTPESV---AMKINAVATALHQ 110 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHH-----TTCEEEEEC--CCCSHHHH---HHHHHHHHHHHTC
T ss_pred CCCEEEEcCCcCchhHHHHHHH-----cCCcEEEeC--CCCCHHHH---HHHHHHHHHHhCC
Confidence 5899999865322455666655 345766653 23344332 2334445555543
No 83
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=26.98 E-value=26 Score=24.25 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=26.6
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
|.+..||.+|-.....|. .....|++.|+.|..+++|...
T Consensus 3 ~~~~~~ilivdd~~~~~~-~l~~~L~~~g~~v~~~~~~~~a 42 (136)
T 3kto_A 3 LNHHPIIYLVDHQKDARA-ALSKLLSPLDVTIQCFASAESF 42 (136)
T ss_dssp ----CEEEEECSCHHHHH-HHHHHHTTSSSEEEEESSHHHH
T ss_pred CCCCCeEEEEcCCHHHHH-HHHHHHHHCCcEEEEeCCHHHH
Confidence 345678877766555444 4556788899999999888655
No 84
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam, SELF assembly, siderophore; HET: ECA; 2.40A {Campylobacter jejuni} SCOP: c.92.2.4
Probab=26.07 E-value=1.1e+02 Score=24.92 Aligned_cols=70 Identities=10% Similarity=0.147 Sum_probs=35.1
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+.... ....+.|.. .. |+-+++.+-.++.++- ...+..|.+.+.+ ++.+-+++++-+++.
T Consensus 95 ~PDLIi~~~~~--~~~~~~L~~-----~~-p~v~~~~~~~~~~~~~---~~~i~~lg~~~g~~~~A~~l~~~~~~~~~~~ 163 (296)
T 2chu_A 95 KPDLIIISGRQ--SKFYDKLKE-----IA-PTLFVGLDNANFLSSF---ENNVLSVAKLYGLEKEALEKISDIKNEIEKA 163 (296)
T ss_dssp CCSEEEECTTT--GGGHHHHHT-----TS-CEEECCCCTTSHHHHH---HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCcc--HHHHHHHHh-----hC-CEEEEecCCccchHHH---HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 58999986521 334444544 22 7755543212222222 2334455555544 344555566666666
Q ss_pred HHHc
Q psy9210 220 EEKC 223 (234)
Q Consensus 220 eek~ 223 (234)
.++.
T Consensus 164 ~~~~ 167 (296)
T 2chu_A 164 KSIV 167 (296)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 6655
No 85
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=26.07 E-value=40 Score=25.81 Aligned_cols=32 Identities=19% Similarity=0.405 Sum_probs=18.9
Q ss_pred HHHHHHHhhcch-hhHHHHHHHHHHHHHHcCCC
Q psy9210 195 ASELMSMFIKCE-DLDNEIDEIMQEFEEKCSRP 226 (234)
Q Consensus 195 i~eL~~~l~~~e-Dld~~ideil~~feek~~r~ 226 (234)
+++|.+.|.+++ .-|++++.+|..|++-+..|
T Consensus 15 fi~lv~~I~~~~~~~E~e~d~ll~~fe~iteHP 47 (94)
T 3u43_A 15 FLEFVKKICRAEGATEEDDNKLVREFERLTEHP 47 (94)
T ss_dssp HHHHHHHHHHTCCSSHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCC
Confidence 345555555544 55666666777776665544
No 86
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=25.50 E-value=32 Score=23.26 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=25.8
Q ss_pred CCCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
..+.||.+|-.....|. .....|.+.|+.|..+.+|...
T Consensus 4 ~~~~~ilivdd~~~~~~-~l~~~L~~~g~~v~~~~~~~~a 42 (132)
T 3lte_A 4 KQSKRILVVDDDQAMAA-AIERVLKRDHWQVEIAHNGFDA 42 (132)
T ss_dssp ---CEEEEECSCHHHHH-HHHHHHHHTTCEEEEESSHHHH
T ss_pred CCCccEEEEECCHHHHH-HHHHHHHHCCcEEEEeCCHHHH
Confidence 45677777765444443 5567788899999988887655
No 87
>2vt8_A HPI31, PI31, proteasome inhibitor PI31 subunit; polymorphism, hydrolase inhibitor; 2.6A {Homo sapiens}
Probab=25.45 E-value=37 Score=26.75 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=22.3
Q ss_pred HHHHHHhhCCCceeeccCCC--------CCCccccc
Q psy9210 20 EAHAYLSKKGVDVKSFGTGD--------KKPQQWES 47 (234)
Q Consensus 20 EAH~~L~k~G~~V~SfGTG~--------~v~~~~~~ 47 (234)
=.|..|-+.||+....|... ..|..|.+
T Consensus 27 ~vH~~m~~~gfr~~g~g~~~~~~~~~se~LP~~WN~ 62 (153)
T 2vt8_A 27 FLHWEVVTHGYCGLGVGDQPGPNDKKSELLPAGWNN 62 (153)
T ss_dssp HHHHHHHTTTEEEEEESSSCCTTCCCBSSCCTTTTS
T ss_pred HHHHHHHhcCCEeccCCCccCcccccccCCCHHHcC
Confidence 36999999999999776653 47888876
No 88
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=25.15 E-value=44 Score=26.13 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=24.9
Q ss_pred ceEEEEecCCCccchHHHHHHhh----CC---CceeeccCC
Q psy9210 5 LKVAVVCSSNMNRSMEAHAYLSK----KG---VDVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsSN~NRSMEAH~~L~k----~G---~~V~SfGTG 38 (234)
-.|.|+|.|.++||..|=..|.+ +| .+|..+--|
T Consensus 105 ~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG 145 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGG 145 (169)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTH
T ss_pred CeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCC
Confidence 46889999999999887666654 35 477777444
No 89
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=24.62 E-value=42 Score=28.52 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=27.4
Q ss_pred CceEEEEecCCCccchHHHHHHhh-CCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSK-KGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k-~G~-~V~SfGTG 38 (234)
.-.|.+.|.|. +||..|-..|.+ .|| +|..|--|
T Consensus 259 ~~~ivvyC~sG-~rs~~a~~~L~~~~G~~~v~~~~GG 294 (318)
T 3hzu_A 259 DDQTVVYCRIG-ERSSHTWFVLTHLLGKADVRNYDGS 294 (318)
T ss_dssp TCCCEEECSSS-HHHHHHHHHHHHTSCCSSCEECTTH
T ss_pred CCcEEEEcCCh-HHHHHHHHHHHHHcCCCCeeEeCCc
Confidence 45688999875 799999999987 999 59988444
No 90
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=24.34 E-value=57 Score=26.08 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=24.8
Q ss_pred ceEEEE--ecCCCccchHHHHHHhh----------CCC-ceeeccCC
Q psy9210 5 LKVAVV--CSSNMNRSMEAHAYLSK----------KGV-DVKSFGTG 38 (234)
Q Consensus 5 lk~AvV--CsSN~NRSMEAH~~L~k----------~G~-~V~SfGTG 38 (234)
-++.|| |....+||..|=..|.+ .|| +|..+--|
T Consensus 110 ~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG 156 (211)
T 1qb0_A 110 KRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGG 156 (211)
T ss_dssp SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTH
T ss_pred CCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCH
Confidence 456555 88457899999888876 598 78877544
No 91
>2isb_A Fumarase, FUM-1; NP_069927.1, fumarase of FUM-1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; HET: MSE; 1.66A {Archaeoglobus fulgidus} SCOP: c.8.9.1
Probab=24.02 E-value=35 Score=29.19 Aligned_cols=70 Identities=20% Similarity=0.320 Sum_probs=43.0
Q ss_pred HHHHHHhhCCCceeeccCCCCCCccccceeeeeccccccccccccccceeeeeeecccccccCCCCCCCCCc---eecCC
Q psy9210 20 EAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPN---VYDFH 96 (234)
Q Consensus 20 EAH~~L~k~G~~V~SfGTG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lPG~a~dkPN---vY~F~ 96 (234)
.||+.|.+ ..-.|...|...+.-+|||| ||++++|. +=.+|
T Consensus 49 aAHkRl~e------~l~~Ge~lP~dl~g~~Iyy~------------------------------GP~~~k~~~~~igs~G 92 (192)
T 2isb_A 49 EAHARALE------WMEEGKELPFSFDKGVVYHC------------------------------GPLVKKNDEWRVVSAG 92 (192)
T ss_dssp HHHHHHHH------HHHHTCCCSSCCTTCEEECB------------------------------CCEEEESSSEEEEECC
T ss_pred HHHHHHHH------HHHcCCCCCcCCCCCEEEEe------------------------------cCCCCCCCCcEeeEEC
Confidence 48888876 11123457888999999998 77766665 45677
Q ss_pred CCcHHHHHHHHHhccHHHHhhcchhhhhhhccc
Q psy9210 97 TTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKR 129 (234)
Q Consensus 97 ~TtY~~Iy~dL~~kD~~~Yt~NGlL~MLdRN~r 129 (234)
.||=.-|= .=-+.|..+.|+.-|+..-.|
T Consensus 93 PTTS~RMd----~y~~~ll~~~G~~~mIGKG~r 121 (192)
T 2isb_A 93 PTTSARMN----PFTPKILEKVECMGIIGKGGM 121 (192)
T ss_dssp BCBGGGGT----TTHHHHHHHCSCEEEEEBSCC
T ss_pred CCchhhhh----hhHHHHHHhCCcEEEEECCCC
Confidence 77632210 111334555688888765544
No 92
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=23.95 E-value=2.1e+02 Score=22.98 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=33.5
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+-..--...+.+.|.. ..-||.++. -.++.++.. ..+..|++.+.+ ++.+-+++++-+++.
T Consensus 59 ~PDLIi~~~~~~~~~~~~~L~~-----~gipvv~~~--~~~~~~~~~---~~i~~lg~~~g~~~~A~~l~~~~~~~~~~~ 128 (283)
T 2r79_A 59 RPDILIGTEEMGPPPVLKQLEG-----AGVRVETLS--AKPDLEALE---SNLKKLGDWLGVPQRAEAAELDYRQRLRRQ 128 (283)
T ss_dssp CCSEEEECTTCCCHHHHHHHHH-----TTCCEEECC--CCSSHHHHH---HHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccCcHHHHHHHHH-----cCCcEEEec--CCCCHHHHH---HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5799998653222455566655 234665542 223333321 234445555543 344444444444444
Q ss_pred HHH
Q psy9210 220 EEK 222 (234)
Q Consensus 220 eek 222 (234)
.++
T Consensus 129 ~~~ 131 (283)
T 2r79_A 129 ADW 131 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 93
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.88 E-value=1e+02 Score=25.80 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=22.6
Q ss_pred eEEEEecCCCcc-c------hHHHHHHhhCCCceeeccC
Q psy9210 6 KVAVVCSSNMNR-S------MEAHAYLSKKGVDVKSFGT 37 (234)
Q Consensus 6 k~AvVCsSN~NR-S------MEAH~~L~k~G~~V~SfGT 37 (234)
+|||+|+|+... + -|.=+.|.++|+.|.+=|.
T Consensus 11 ~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 11 KICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp EEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred eEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 699999887643 2 2333678899999876544
No 94
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.73 E-value=92 Score=25.96 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=21.7
Q ss_pred eEEEEecCCCccc---h----HHHHHHhhCCCceeecc
Q psy9210 6 KVAVVCSSNMNRS---M----EAHAYLSKKGVDVKSFG 36 (234)
Q Consensus 6 k~AvVCsSN~NRS---M----EAH~~L~k~G~~V~SfG 36 (234)
+|||+|.|..... . +.=+.|.++|+.|.|=|
T Consensus 15 ~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGG 52 (215)
T 2a33_A 15 RICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGG 52 (215)
T ss_dssp EEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECC
Confidence 6999999987433 1 11245888999998744
No 95
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=23.61 E-value=39 Score=25.66 Aligned_cols=39 Identities=15% Similarity=0.288 Sum_probs=24.8
Q ss_pred HHHHHHHhhcch--hhHHHHHHHHHHHHHHcCCCceeeecc
Q psy9210 195 ASELMSMFIKCE--DLDNEIDEIMQEFEEKCSRPLLHTILF 233 (234)
Q Consensus 195 i~eL~~~l~~~e--Dld~~ideil~~feek~~r~~Lhtv~f 233 (234)
.++|.+.|...+ +.+++-+++|..|++-+.+|-=--+.|
T Consensus 15 Fl~fv~~i~~~~~~~~e~~~d~lv~hF~~iteHP~gsDLIf 55 (87)
T 1unk_A 15 FVQLLKEIEKENVAATDDVLDVLLEHFVKITEHPDGTDLIY 55 (87)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHCCTTTTHHHH
T ss_pred HHHHHHHHHhCCCCCChhHHHHHHHHHHHhcCCCCCCCeee
Confidence 456666666665 577777777888877776664333333
No 96
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=23.45 E-value=84 Score=25.51 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=32.5
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+.. -.....+.|.. .. |+.++..+-.++.++. ...+..|++.+.+ ++.+-+++++-+++.
T Consensus 95 ~PDlIi~~~--~~~~~~~~L~~-----~~-p~v~~~~~~~~~~~~~---~~~i~~lg~~~g~~~~A~~l~~~~~~~~~~i 163 (303)
T 3gfv_A 95 DPDLIIISA--RQSESYKEFSK-----IA-PTIYLGVDTAKYMESF---KSDAETIGKIFDKEDKVKDELANIDHSIADV 163 (303)
T ss_dssp CCSEEEECG--GGGGGHHHHHH-----HS-CEEECCCCGGGHHHHH---HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEcC--cchhHHHHHHh-----hC-CEEEEcCCCcchHHHH---HHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 589999864 12344455544 23 7766554322222222 2334555555543 333444444444444
Q ss_pred HH
Q psy9210 220 EE 221 (234)
Q Consensus 220 ee 221 (234)
.+
T Consensus 164 ~~ 165 (303)
T 3gfv_A 164 KK 165 (303)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 97
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=22.84 E-value=2.8e+02 Score=21.72 Aligned_cols=69 Identities=14% Similarity=0.279 Sum_probs=35.2
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+... .-..+.+.|.. ..-||.+++. ++.++-. ..+..|++.+.+ ++.+-+++++-+++.
T Consensus 60 ~PDLIi~~~~-~~~~~~~~L~~-----~gipvv~~~~---~~~~~~~---~~i~~lg~~~g~~~~A~~~~~~~~~~~~~~ 127 (260)
T 2q8p_A 60 KPTHVLSVST-IKDEMQPFYKQ-----LNMKGYFYDF---DSLKGMQ---KSITQLGDQFNRKAQAKELNDHLNSVKQKI 127 (260)
T ss_dssp CCSEEEEEGG-GHHHHHHHHHH-----HTSCCEEECC---SSHHHHH---HHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEecCc-cCHHHHHHHHH-----cCCcEEEecC---CCHHHHH---HHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 4799998753 22455566655 2347766653 2333221 234455555544 334444455555555
Q ss_pred HHHc
Q psy9210 220 EEKC 223 (234)
Q Consensus 220 eek~ 223 (234)
.++.
T Consensus 128 ~~~~ 131 (260)
T 2q8p_A 128 ENKA 131 (260)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 98
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=22.80 E-value=54 Score=27.81 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=28.8
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|-|.|.+..-||-.|-..|+..|| +|..+--|
T Consensus 111 ~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG 146 (318)
T 3hzu_A 111 DDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGG 146 (318)
T ss_dssp TCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTH
T ss_pred CCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCC
Confidence 457889999877689999999999999 58877544
No 99
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=22.70 E-value=50 Score=27.27 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=24.4
Q ss_pred EEEEecCCCccchHHHHHHhhC----------CC-ceeeccCC
Q psy9210 7 VAVVCSSNMNRSMEAHAYLSKK----------GV-DVKSFGTG 38 (234)
Q Consensus 7 ~AvVCsSN~NRSMEAH~~L~k~----------G~-~V~SfGTG 38 (234)
|.+.|.+..+||..|-..|.+. || +|...--|
T Consensus 127 VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG 169 (216)
T 3op3_A 127 IVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGG 169 (216)
T ss_dssp EEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTH
T ss_pred EEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCc
Confidence 8899997889999999999987 66 57766444
No 100
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=22.51 E-value=87 Score=25.82 Aligned_cols=34 Identities=15% Similarity=0.035 Sum_probs=26.0
Q ss_pred ceEEEEecC--CCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 5 LKVAVVCSS--NMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 5 lk~AvVCsS--N~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
-.|-|.|.+ ..-+|..|-..|+..|| +|...--|
T Consensus 93 ~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG 129 (296)
T 1rhs_A 93 THVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGG 129 (296)
T ss_dssp CEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTH
T ss_pred CeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCC
Confidence 468889988 43347888999999999 68876444
No 101
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=21.50 E-value=1e+02 Score=24.11 Aligned_cols=70 Identities=11% Similarity=0.151 Sum_probs=34.6
Q ss_pred CccEEEEecchhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHHHH
Q psy9210 143 KFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQEF 219 (234)
Q Consensus 143 ~fDvIiTcEERvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~~f 219 (234)
+.|+||+.....-....+.|.. ..-||.+++- ++.++. ...+..|++.+.+ ++.+-+++++-+++.
T Consensus 57 ~PDLIi~~~~~~~~~~~~~L~~-----~gipvv~~~~---~~~~~~---~~~i~~lg~~lg~~~~A~~~~~~~~~~~~~~ 125 (245)
T 1n2z_A 57 KPDLVIAWRGGNAERQVDQLAS-----LGIKVMWVDA---TSIEQI---ANALRQLAPWSPQPDKAEQAAQSLLDQYAQL 125 (245)
T ss_dssp CCSEEEECTTTSCHHHHHHHHH-----HTCCEEECCC---CSHHHH---HHHHHHHGGGCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHH-----CCCcEEEeCC---CCHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5799999643223456666655 2347766542 233322 1233444555533 333444445555555
Q ss_pred HHHc
Q psy9210 220 EEKC 223 (234)
Q Consensus 220 eek~ 223 (234)
.++.
T Consensus 126 ~~~~ 129 (245)
T 1n2z_A 126 KAQY 129 (245)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 102
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=21.36 E-value=53 Score=28.90 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=0.0
Q ss_pred CCCceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.+.-.|.+.|.| -.||..|=..|.+.|| +|..|--|
T Consensus 244 ~~d~~ivvyC~s-G~rs~~a~~~L~~~G~~~v~~~~GG 280 (373)
T 1okg_A 244 ADLSSFVFSCGS-GVTACINIALVHHLGLGHPYLYCGS 280 (373)
T ss_dssp CCCTTSEEECSS-SSTHHHHHHHHHHTTSCCCEECSSH
T ss_pred cCCCCEEEECCc-hHHHHHHHHHHHHcCCCCeeEeCCh
No 103
>3bei_A Prothrombin; serine protease, acute phase, blood coagulation, cleavage on basic residues, disease mutation, gamma-carboxyglutamic ACI glycoprotein; HET: NAG; 1.55A {Homo sapiens} PDB: 1tq7_A* 3lu9_A* 3bef_A* 2pgq_A* 1z8j_A* 1z8i_A* 3hk3_A 2pv9_A* 3edx_A* 2pux_A 3hk6_A 3hki_A* 2ocv_A* 1avg_L 2a1d_A*
Probab=21.34 E-value=24 Score=24.28 Aligned_cols=12 Identities=25% Similarity=0.811 Sum_probs=11.2
Q ss_pred CceeeccCCCCC
Q psy9210 30 VDVKSFGTGDKK 41 (234)
Q Consensus 30 ~~V~SfGTG~~v 41 (234)
||.+|||.|...
T Consensus 5 FnpktFG~GE~d 16 (44)
T 3bei_A 5 FNPRTFGSGEAD 16 (44)
T ss_dssp SCHHHHCSCSTT
T ss_pred cCCccccCcccc
Confidence 789999999999
No 104
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=21.21 E-value=57 Score=29.74 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=27.6
Q ss_pred CceEEEEecCCCccchHHHHHHhhCCC-ceeeccCC
Q psy9210 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGTG 38 (234)
Q Consensus 4 ~lk~AvVCsSN~NRSMEAH~~L~k~G~-~V~SfGTG 38 (234)
.-.|-++|.+.. ||..|-..|++.|| +|..+--|
T Consensus 63 ~~~iVvyc~~g~-~s~~a~~~L~~~G~~~V~~L~GG 97 (539)
T 1yt8_A 63 DTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGG 97 (539)
T ss_dssp TSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTH
T ss_pred CCeEEEEECCCC-hHHHHHHHHHHcCCCceEEeCCC
Confidence 457889998765 99999999999999 68776433
No 105
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=21.16 E-value=2.4e+02 Score=23.24 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=39.0
Q ss_pred CccEEEEecchh--HHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhHHHHHHHHHHhhc---chhhHHHHHHHHH
Q psy9210 143 KFDIIITCEERV--YDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFIK---CEDLDNEIDEIMQ 217 (234)
Q Consensus 143 ~fDvIiTcEERv--yD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga~~i~eL~~~l~~---~eDld~~ideil~ 217 (234)
+.|+||+....- .....+.|.. .. ||.+++.+- ++-++ .+..|.+.+.+ ++.+-+++++-++
T Consensus 115 ~PDLIi~~~~~~~~~~~~~~~L~~-----~g-pvv~~~~~~-~~~~~------~i~~lg~~lg~~~~A~~li~~~~~~~~ 181 (326)
T 3tlk_A 115 MPDLILISATGGDSALALYDQLST-----IA-PTLIINYDD-KSWQS------LLTQLGEITGHEKQAAERIAQFDKQLA 181 (326)
T ss_dssp CCSEEEEESSSTTCCGGGHHHHHT-----TS-CEEEECCSS-SCHHH------HHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccchHHHHHHHHh-----hC-CEEEEcCCc-ccHHH------HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 589999875321 1233444444 45 888887642 33332 35556666644 4456666666677
Q ss_pred HHHHHc
Q psy9210 218 EFEEKC 223 (234)
Q Consensus 218 ~feek~ 223 (234)
+..++.
T Consensus 182 ~i~~~~ 187 (326)
T 3tlk_A 182 AAKEQI 187 (326)
T ss_dssp HHHHHB
T ss_pred HHHHhh
Confidence 777765
No 106
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A
Probab=21.12 E-value=70 Score=25.40 Aligned_cols=24 Identities=17% Similarity=0.422 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcee
Q psy9210 206 EDLDNEIDEIMQEFEEKCSRPLLH 229 (234)
Q Consensus 206 eDld~~ideil~~feek~~r~~Lh 229 (234)
--+++++...+.+||+.+|.|+|.
T Consensus 64 P~l~~~L~~~i~~wE~e~g~~Flv 87 (130)
T 3nrx_A 64 PKLEEELKARIELWEQEHSKAFMV 87 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred hHHHHHHHHHHHHHHHHcCCeeeE
Confidence 457888999999999999999985
No 107
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=21.11 E-value=49 Score=27.29 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=27.7
Q ss_pred CceEEEEecCC-CccchHHHHHHhhCCCceeeccCCCC
Q psy9210 4 NLKVAVVCSSN-MNRSMEAHAYLSKKGVDVKSFGTGDK 40 (234)
Q Consensus 4 ~lk~AvVCsSN-~NRSMEAH~~L~k~G~~V~SfGTG~~ 40 (234)
.+|||+-|--. ..--.+.-.+|.++|+.|.-|||-+.
T Consensus 3 ~MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~ 40 (162)
T 2vvp_A 3 GMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRY 40 (162)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHTTCEEEECSCCSC
T ss_pred CCEEEEEeCchhHHHHHHHHHHHHHCCCEEEEeCCCCC
Confidence 47888877443 44445677789999999999998653
No 108
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=20.42 E-value=53 Score=22.55 Aligned_cols=40 Identities=13% Similarity=0.053 Sum_probs=28.1
Q ss_pred CCCCceEEEEecCCCccchHHHHHHhh-CCCceeeccCCCCC
Q psy9210 1 MPSNLKVAVVCSSNMNRSMEAHAYLSK-KGVDVKSFGTGDKK 41 (234)
Q Consensus 1 ~~s~lk~AvVCsSN~NRSMEAH~~L~k-~G~~V~SfGTG~~v 41 (234)
|....||.+|-.....|. ..-..|.+ .|++|..+.+|...
T Consensus 1 M~~~~~ilivdd~~~~~~-~l~~~L~~~~~~~v~~~~~~~~a 41 (140)
T 3lua_A 1 MSLDGTVLLIDYFEYERE-KTKIIFDNIGEYDFIEVENLKKF 41 (140)
T ss_dssp --CCCEEEEECSCHHHHH-HHHHHHHHHCCCEEEEECSHHHH
T ss_pred CCCCCeEEEEeCCHHHHH-HHHHHHHhccCccEEEECCHHHH
Confidence 667788887766655554 44567777 89999999888655
No 109
>3e1k_B Lactose regulatory protein LAC9; transctiption, repressor, trans-activation, carbohydrate metabolism, DNA-binding, galactose metabolism; 3.00A {Kluyveromyces lactis}
Probab=20.33 E-value=47 Score=19.89 Aligned_cols=17 Identities=41% Similarity=0.858 Sum_probs=13.6
Q ss_pred CCCCcHHHHHHHHHhcc
Q psy9210 95 FHTTTYEDIYQDLMNKD 111 (234)
Q Consensus 95 F~~TtY~~Iy~dL~~kD 111 (234)
|.+||-+|+|+-|-..|
T Consensus 5 fntttmddvynylfd~~ 21 (22)
T 3e1k_B 5 FNTTTMDDVYNYIFDND 21 (26)
T ss_pred cccccHHHHHHHhccCC
Confidence 78899999999875543
No 110
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=20.22 E-value=2e+02 Score=23.41 Aligned_cols=39 Identities=8% Similarity=-0.083 Sum_probs=29.3
Q ss_pred hhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhH
Q psy9210 153 RVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGA 192 (234)
Q Consensus 153 RvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga 192 (234)
+-....+++++. +++..++++.++-.|-+.+.+.|.-.+
T Consensus 29 ~g~~~a~~~iN~-~ggi~G~~i~l~~~D~~~~~~~~~~~~ 67 (392)
T 3lkb_A 29 AAVEDYCKWANE-RKLVPGVVFNCVVRDDQYNNANTQRFF 67 (392)
T ss_dssp HHHHHHHHHHHH-HTSSTTEEEEEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCcCCeEeEEEEecCCCCHHHHHHHH
Confidence 445677888888 677778999999888888877664433
No 111
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.13 E-value=65 Score=24.97 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=26.2
Q ss_pred CCCceEEEEecCC--------------CccchHHHHHHhhCCCceeeccC
Q psy9210 2 PSNLKVAVVCSSN--------------MNRSMEAHAYLSKKGVDVKSFGT 37 (234)
Q Consensus 2 ~s~lk~AvVCsSN--------------~NRSMEAH~~L~k~G~~V~SfGT 37 (234)
|.++|+||+-.|. -|.. -.-+.|.+.|++|..+++
T Consensus 13 ~~~~~v~iitvsd~~~~~~~~~g~i~D~ng~-~L~~~L~~~G~~v~~~~i 61 (178)
T 3iwt_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGD-IIKQLLIENGHKIIGYSL 61 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHH-HHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEcCCCccccccCCCCCcchHH-HHHHHHHHCCCEEEEEEE
Confidence 5689999997764 2222 245789999999999885
No 112
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=20.10 E-value=55 Score=23.04 Aligned_cols=39 Identities=10% Similarity=0.019 Sum_probs=28.0
Q ss_pred CCCceEEEEecCCCccchHHHHHHhhCCCceeeccCCCCC
Q psy9210 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKK 41 (234)
Q Consensus 2 ~s~lk~AvVCsSN~NRSMEAH~~L~k~G~~V~SfGTG~~v 41 (234)
+...+|.+|-.....|. .....|++.|+.|..+.+|...
T Consensus 12 ~~~~~ILivdd~~~~~~-~l~~~L~~~g~~v~~~~~~~~a 50 (153)
T 3hv2_A 12 TRRPEILLVDSQEVILQ-RLQQLLSPLPYTLHFARDATQA 50 (153)
T ss_dssp CSCCEEEEECSCHHHHH-HHHHHHTTSSCEEEEESSHHHH
T ss_pred cCCceEEEECCCHHHHH-HHHHHhcccCcEEEEECCHHHH
Confidence 45678877766555444 4567788899999998888665
No 113
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=20.09 E-value=2.2e+02 Score=22.93 Aligned_cols=39 Identities=8% Similarity=0.075 Sum_probs=29.1
Q ss_pred hhHHHHHHhHhhhcccCCCceeEEEEeecCCCHHHHhhhH
Q psy9210 153 RVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGA 192 (234)
Q Consensus 153 RvyD~V~Edl~~~r~~~~~~pVHvINiDI~Dn~EeA~~Ga 192 (234)
+-....+++++. +++..++++.++-.|-+.+.+.|.-.+
T Consensus 27 ~g~~~a~~~~N~-~ggi~G~~i~l~~~D~~~~~~~~~~~~ 65 (364)
T 3lop_A 27 AGARLYFDWLNL-NGGINGETIRLVARDDEQKIEQTVRNV 65 (364)
T ss_dssp HHHHHHHHHHHH-TTTBTTBCEEEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCcCCeEEEEEEeCCCCCHHHHHHHH
Confidence 345667788887 677788999999999888877665443
Done!