Your job contains 1 sequence.
>psy9210
MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFCSEL
IPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGL
LHMLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINID
IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9210
(234 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031054 - symbol:Ssu72 "Ssu72 ortholog" species:72... 488 1.1e-60 2
ZFIN|ZDB-GENE-040426-1689 - symbol:ssu72 "SSU72 RNA polym... 495 1.8e-60 2
UNIPROTKB|Q5ZJQ7 - symbol:SSU72 "RNA polymerase II subuni... 490 9.9e-60 2
UNIPROTKB|Q17QI2 - symbol:SSU72 "RNA polymerase II subuni... 490 9.9e-60 2
UNIPROTKB|Q9NP77 - symbol:SSU72 "RNA polymerase II subuni... 489 1.3e-59 2
RGD|1307854 - symbol:Ssu72 "SSU72 RNA polymerase II CTD p... 489 1.3e-59 2
UNIPROTKB|E2QZ84 - symbol:SSU72 "Uncharacterized protein"... 487 2.0e-59 2
MGI|MGI:1916241 - symbol:Ssu72 "Ssu72 RNA polymerase II C... 483 5.4e-59 2
UNIPROTKB|F1RJC9 - symbol:SSU72 "Uncharacterized protein"... 482 6.9e-59 2
UNIPROTKB|J9NXK3 - symbol:J9NXK3 "Uncharacterized protein... 475 7.8e-58 2
UNIPROTKB|J9P6L8 - symbol:LOC608299 "Uncharacterized prot... 434 4.2e-51 2
WB|WBGene00020480 - symbol:ssup-72 species:6239 "Caenorha... 421 5.4e-51 2
UNIPROTKB|G1K158 - symbol:SSU72 "RNA polymerase II subuni... 490 3.7e-50 2
UNIPROTKB|E1BBD9 - symbol:LOC617499 "Uncharacterized prot... 397 2.9e-48 2
UNIPROTKB|A8MSY0 - symbol:A8MSY0 "Putative RNA polymerase... 381 4.2e-47 2
UNIPROTKB|A6NK39 - symbol:A6NK39 "Putative RNA polymerase... 385 5.3e-47 2
UNIPROTKB|E1BAB2 - symbol:E1BAB2 "Uncharacterized protein... 360 1.6e-45 2
UNIPROTKB|A6NG73 - symbol:A6NG73 "Putative RNA polymerase... 365 6.7e-45 2
UNIPROTKB|G3MZ63 - symbol:LOC788349 "Uncharacterized prot... 360 1.4e-44 2
UNIPROTKB|G5E5U5 - symbol:G5E5U5 "Uncharacterized protein... 356 2.3e-44 2
UNIPROTKB|G3MZ34 - symbol:LOC788349 "Uncharacterized prot... 356 3.7e-44 2
UNIPROTKB|F1MS03 - symbol:F1MS03 "Uncharacterized protein... 379 7.6e-44 2
UNIPROTKB|F1RF63 - symbol:LOC100524945 "Uncharacterized p... 315 5.2e-41 2
DICTYBASE|DDB_G0272871 - symbol:ssu72 "RNA polymerase II ... 327 7.3e-38 2
POMBASE|SPAC3G9.04 - symbol:ssu72 "phosphoric ester hydro... 305 1.2e-37 2
TAIR|locus:2027789 - symbol:AT1G73820 species:3702 "Arabi... 295 4.0e-37 2
SGD|S000005166 - symbol:SSU72 "Phosphatase and transcript... 288 2.4e-35 2
ASPGD|ASPL0000012150 - symbol:AN3810 species:162425 "Emer... 284 3.4e-32 2
CGD|CAL0001446 - symbol:SSU72 species:5476 "Candida albic... 250 3.0e-31 2
UNIPROTKB|F1RF65 - symbol:LOC100737070 "Uncharacterized p... 243 1.3e-20 1
>FB|FBgn0031054 [details] [associations]
symbol:Ssu72 "Ssu72 ortholog" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016791 "phosphatase activity"
evidence=IDA] [GO:0070940 "dephosphorylation of RNA polymerase II
C-terminal domain" evidence=IDA] [GO:0008420 "CTD phosphatase
activity" evidence=IDA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 EMBL:AE014298 GO:GO:0006397 GO:GO:0008420
GO:GO:0070940 eggNOG:COG5211 PANTHER:PTHR20383 KO:K15544
GeneTree:ENSGT00390000010165 OMA:SMEAHNF EMBL:AY060426
RefSeq:NP_608342.1 UniGene:Dm.3992 PDB:3FDF PDB:3FMV PDB:3OMW
PDB:3OMX PDB:3P9Y PDBsum:3FDF PDBsum:3FMV PDBsum:3OMW PDBsum:3OMX
PDBsum:3P9Y SMR:Q9VWE4 STRING:Q9VWE4 EnsemblMetazoa:FBtr0074747
GeneID:32973 KEGG:dme:Dmel_CG14216 UCSC:CG14216-RA
FlyBase:FBgn0031054 InParanoid:Q9VWE4 OrthoDB:EOG412JNM
EvolutionaryTrace:Q9VWE4 GenomeRNAi:32973 NextBio:781308
Uniprot:Q9VWE4
Length = 195
Score = 488 (176.8 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 88/153 (57%), Positives = 125/153 (81%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVY+F T YEDIY+DL +KDK FYT+NGLLHML+RN+RIK PE+FQ++K
Sbjct: 45 LPGMAFDKPNVYEFGTK-YEDIYRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTK 103
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
++FDII+T EERVYD V+ H ++ M S++N PVH++N+D+ DN E+A +GAF+ +++++M
Sbjct: 104 EQFDIIVTVEERVYDLVVMHMES-MESVDNRPVHVLNVDVVDNAEDALMGAFVITDMINM 162
Query: 202 FIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
K DLDN+IDE++QEFEE+ R +LH++LFY
Sbjct: 163 MAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
Score = 151 (58.2 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 28/39 (71%), Positives = 35/39 (89%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDK 40
PS L VAVVCSSNMNRSMEAH +L+KKG +V+S+GTG++
Sbjct: 4 PSKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGER 42
>ZFIN|ZDB-GENE-040426-1689 [details] [associations]
symbol:ssu72 "SSU72 RNA polymerase II CTD
phosphatase homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR006811
Pfam:PF04722 ZFIN:ZDB-GENE-040426-1689 GO:GO:0005634 GO:GO:0005737
GO:GO:0006397 GO:GO:0004721 HOGENOM:HOG000183445 HOVERGEN:HBG059831
PANTHER:PTHR20383 CTD:29101 KO:K15544 GeneTree:ENSGT00390000010165
EMBL:BC059504 IPI:IPI00491577 RefSeq:NP_957022.1 UniGene:Dr.76327
ProteinModelPortal:Q6PC19 PRIDE:Q6PC19 Ensembl:ENSDART00000041895
GeneID:393701 KEGG:dre:393701 InParanoid:Q6PC19 NextBio:20814704
Bgee:Q6PC19 Uniprot:Q6PC19
Length = 194
Score = 495 (179.3 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 92/154 (59%), Positives = 119/154 (77%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPN+YDF TT YE +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ +
Sbjct: 44 LPGPAPDKPNIYDFKTT-YEQMYNDLVRKDKELYTQNGILHMLDRNKRIKSRPERFQSCR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDN-QMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D+FD++ITCEERVYDQVLE ++ + S + PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 103 DQFDLVITCEERVYDQVLEDLNSREQESFQ--PVHVINVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D++NE+DE++QEFEEK RP LH++ FY
Sbjct: 161 CIQHTDDMENEMDELLQEFEEKSHRPFLHSVCFY 194
Score = 142 (55.0 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 28/37 (75%), Positives = 31/37 (83%)
Query: 2 PSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
P L+VAVVCSSN NRSMEAH LSK+G DV+SFGTG
Sbjct: 3 PHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTG 39
>UNIPROTKB|Q5ZJQ7 [details] [associations]
symbol:SSU72 "RNA polymerase II subunit A C-terminal domain
phosphatase SSU72" species:9031 "Gallus gallus" [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR006811
Pfam:PF04722 GO:GO:0005634 GO:GO:0005737 GO:GO:0006397
GO:GO:0004721 eggNOG:COG5211 HOGENOM:HOG000183445
HOVERGEN:HBG059831 PANTHER:PTHR20383 CTD:29101 KO:K15544
OrthoDB:EOG49PB0D EMBL:AJ720377 IPI:IPI00577210
RefSeq:NP_001007876.1 UniGene:Gga.9388 ProteinModelPortal:Q5ZJQ7
STRING:Q5ZJQ7 Ensembl:ENSGALT00000002258 GeneID:419410
KEGG:gga:419410 GeneTree:ENSGT00390000010165 InParanoid:Q5ZJQ7
OMA:SMEAHNF NextBio:20822469 Uniprot:Q5ZJQ7
Length = 194
Score = 490 (177.5 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 94/154 (61%), Positives = 116/154 (75%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 103 DVFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVINVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
Score = 140 (54.3 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>UNIPROTKB|Q17QI2 [details] [associations]
symbol:SSU72 "RNA polymerase II subunit A C-terminal domain
phosphatase SSU72" species:9913 "Bos taurus" [GO:0008420 "CTD
phosphatase activity" evidence=ISS] [GO:0070940 "dephosphorylation
of RNA polymerase II C-terminal domain" evidence=ISS] [GO:0006378
"mRNA polyadenylation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0008420 GO:GO:0070940 eggNOG:COG5211
HOGENOM:HOG000183445 HOVERGEN:HBG059831 PANTHER:PTHR20383
EMBL:BC118344 IPI:IPI00712432 RefSeq:NP_001069817.1
UniGene:Bt.59246 ProteinModelPortal:Q17QI2 GeneID:614837
KEGG:bta:614837 CTD:29101 InParanoid:Q17QI2 KO:K15544
OrthoDB:EOG49PB0D NextBio:20899312 Uniprot:Q17QI2
Length = 194
Score = 490 (177.5 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 94/154 (61%), Positives = 116/154 (75%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 103 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVINVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
Score = 140 (54.3 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>UNIPROTKB|Q9NP77 [details] [associations]
symbol:SSU72 "RNA polymerase II subunit A C-terminal domain
phosphatase SSU72" species:9606 "Homo sapiens" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0070940 "dephosphorylation of RNA polymerase II C-terminal
domain" evidence=IDA] [GO:0008420 "CTD phosphatase activity"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 EMBL:CH471183 EMBL:AL645728 GO:GO:0008420
GO:GO:0070940 eggNOG:COG5211 HOGENOM:HOG000183445
HOVERGEN:HBG059831 PANTHER:PTHR20383 CTD:29101 KO:K15544
OrthoDB:EOG49PB0D OMA:SMEAHNF EMBL:AF161530 EMBL:AF277178
EMBL:AJ276409 EMBL:AK001809 EMBL:AK023110 EMBL:AK291324
EMBL:BC008070 IPI:IPI00023556 IPI:IPI00073512 RefSeq:NP_054907.1
UniGene:Hs.30026 UniGene:Hs.549751 PDB:3O2Q PDB:3O2S PDB:4H3H
PDB:4H3K PDBsum:3O2Q PDBsum:3O2S PDBsum:4H3H PDBsum:4H3K
ProteinModelPortal:Q9NP77 SMR:Q9NP77 DIP:DIP-53666N IntAct:Q9NP77
STRING:Q9NP77 PhosphoSite:Q9NP77 DMDM:74752877 PaxDb:Q9NP77
PRIDE:Q9NP77 DNASU:29101 Ensembl:ENST00000291386
Ensembl:ENST00000359060 GeneID:29101 KEGG:hsa:29101 UCSC:uc001agd.3
UCSC:uc001age.1 GeneCards:GC01M001477 HGNC:HGNC:25016
neXtProt:NX_Q9NP77 PharmGKB:PA142670866 InParanoid:Q9NP77
PhylomeDB:Q9NP77 ChiTaRS:SSU72 EvolutionaryTrace:Q9NP77
GenomeRNAi:29101 NextBio:52137 ArrayExpress:Q9NP77 Bgee:Q9NP77
CleanEx:HS_SSU72 Genevestigator:Q9NP77 Uniprot:Q9NP77
Length = 194
Score = 489 (177.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 93/154 (60%), Positives = 116/154 (75%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH++N+DIQDN EEATLGAFL EL
Sbjct: 103 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVVNVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 194
Score = 140 (54.3 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>RGD|1307854 [details] [associations]
symbol:Ssu72 "SSU72 RNA polymerase II CTD phosphatase homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO;ISS] [GO:0008420
"CTD phosphatase activity" evidence=ISO;ISS] [GO:0070940
"dephosphorylation of RNA polymerase II C-terminal domain"
evidence=ISO;ISS] InterPro:IPR006811 Pfam:PF04722 RGD:1307854
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0008420
GO:GO:0070940 eggNOG:COG5211 HOGENOM:HOG000183445
HOVERGEN:HBG059831 PANTHER:PTHR20383 CTD:29101 KO:K15544
OrthoDB:EOG49PB0D GeneTree:ENSGT00390000010165 OMA:SMEAHNF
EMBL:BC099142 IPI:IPI00190022 RefSeq:NP_001020828.1
UniGene:Rn.103950 ProteinModelPortal:Q4KLK9 STRING:Q4KLK9
PRIDE:Q4KLK9 Ensembl:ENSRNOT00000024349 GeneID:298681
KEGG:rno:298681 InParanoid:Q4KLK9 NextBio:644160
Genevestigator:Q4KLK9 Uniprot:Q4KLK9
Length = 194
Score = 489 (177.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 93/154 (60%), Positives = 116/154 (75%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH++N+DIQDN EEATLGAFL EL
Sbjct: 103 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVVNVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
Score = 140 (54.3 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>UNIPROTKB|E2QZ84 [details] [associations]
symbol:SSU72 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
CTD:29101 KO:K15544 GeneTree:ENSGT00390000010165 OMA:SMEAHNF
EMBL:AAEX03003848 EMBL:AAEX03003849 RefSeq:NP_001239254.1
UniGene:Cfa.11042 ProteinModelPortal:E2QZ84
Ensembl:ENSCAFT00000030566 GeneID:479567 KEGG:cfa:479567
NextBio:20854735 Uniprot:E2QZ84
Length = 194
Score = 487 (176.5 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 93/154 (60%), Positives = 116/154 (75%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ +
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 103 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVINVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
Score = 140 (54.3 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>MGI|MGI:1916241 [details] [associations]
symbol:Ssu72 "Ssu72 RNA polymerase II CTD phosphatase
homolog (yeast)" species:10090 "Mus musculus" [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006378
"mRNA polyadenylation" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008420 "CTD phosphatase activity" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070940
"dephosphorylation of RNA polymerase II C-terminal domain"
evidence=ISO] InterPro:IPR006811 Pfam:PF04722 MGI:MGI:1916241
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 EMBL:AL670236
GO:GO:0008420 GO:GO:0070940 eggNOG:COG5211 HOGENOM:HOG000183445
HOVERGEN:HBG059831 PANTHER:PTHR20383 CTD:29101 KO:K15544
OrthoDB:EOG49PB0D GeneTree:ENSGT00390000010165 OMA:SMEAHNF
EMBL:AK005220 EMBL:AK019168 EMBL:AK148783 EMBL:BC016544
IPI:IPI00318564 IPI:IPI00460332 RefSeq:NP_081175.2
UniGene:Mm.294770 UniGene:Mm.483261 ProteinModelPortal:Q9CY97
SMR:Q9CY97 STRING:Q9CY97 PhosphoSite:Q9CY97 PaxDb:Q9CY97
PRIDE:Q9CY97 Ensembl:ENSMUST00000030905 Ensembl:ENSMUST00000105595
GeneID:68991 KEGG:mmu:68991 UCSC:uc008wek.2 UCSC:uc008wel.2
InParanoid:Q9CY97 NextBio:328359 Bgee:Q9CY97 Genevestigator:Q9CY97
Uniprot:Q9CY97
Length = 194
Score = 483 (175.1 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 92/154 (59%), Positives = 115/154 (74%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCT 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH++N+DIQDN EEATLGAFL EL
Sbjct: 103 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVVNVDIQDNHEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 194
Score = 140 (54.3 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>UNIPROTKB|F1RJC9 [details] [associations]
symbol:SSU72 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004721 "phosphoprotein phosphatase
activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 OMA:SMEAHNF EMBL:FP102593
Ensembl:ENSSSCT00000003717 Uniprot:F1RJC9
Length = 195
Score = 482 (174.7 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 94/155 (60%), Positives = 116/155 (74%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAF-YTRNGLLHMLERNKRIKLKPEKFQES 140
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ
Sbjct: 44 LPGPAPDKPNVYDFRTT-YDQMYNDLLRKDKELHYTQNGILHMLDRNKRIKPRPERFQNC 102
Query: 141 KDKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELM 199
KD FD+I+TCEERVYDQV+E +++ E PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 103 KDLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVINVDIQDNHEEATLGAFLICELC 160
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 161 QCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 195
Score = 140 (54.3 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVCSSN NRSMEAH LSK+G V+SFGTG
Sbjct: 1 MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTG 39
>UNIPROTKB|J9NXK3 [details] [associations]
symbol:J9NXK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:AAEX03026291
Ensembl:ENSCAFT00000022394 OMA:EGERTHT Uniprot:J9NXK3
Length = 194
Score = 475 (172.3 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 92/154 (59%), Positives = 114/154 (74%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK PE+FQ +
Sbjct: 44 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKDLYTQNGILHMLDRNKRIKPHPERFQNCR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E D + E PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 103 DVFDLIVTCEERVYDQVVE--DLTLREQETCQPVHVINVDIQDNLEEATLGAFLICELCQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+D++N+IDE++QEFEEK R LHT+ FY
Sbjct: 161 CIQHTDDMENDIDELLQEFEEKSGRAFLHTVCFY 194
Score = 137 (53.3 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS LKVAVVCSSN NRSMEAH L+K+G V+SFGTG
Sbjct: 1 MPSVPLKVAVVCSSNQNRSMEAHNILNKRGFSVRSFGTG 39
>UNIPROTKB|J9P6L8 [details] [associations]
symbol:LOC608299 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634 GO:GO:0006397
GO:GO:0004721 PANTHER:PTHR20383 GeneTree:ENSGT00390000010165
EMBL:AAEX03013447 Ensembl:ENSCAFT00000007129 Uniprot:J9P6L8
Length = 182
Score = 434 (157.8 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 87/154 (56%), Positives = 111/154 (72%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A D+PNVYDF TT Y DL+ DK YT+NG+LHML++NKRIK +PE+FQ +
Sbjct: 37 LPGPAPDRPNVYDFKTT-----Y-DLLRTDKELYTQNGILHMLDKNKRIKPRPERFQNCR 90
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH+IN+DIQDN EEATLGAFL L
Sbjct: 91 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVINVDIQDNHEEATLGAFLICGLCQ 148
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LH++ FY
Sbjct: 149 CIQHTEDMENEIDELLQEFEEKSGRAFLHSVGFY 182
Score = 114 (45.2 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 7 VAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
VAVVCSS NRSME H L+K+G V+SFGTG
Sbjct: 1 VAVVCSSTQNRSMEVHKILNKRGFSVRSFGTG 32
>WB|WBGene00020480 [details] [associations]
symbol:ssup-72 species:6239 "Caenorhabditis elegans"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634
GO:GO:0006397 GO:GO:0004721 eggNOG:COG5211 HOGENOM:HOG000183445
PANTHER:PTHR20383 KO:K15544 GeneTree:ENSGT00390000010165
OMA:SMEAHNF EMBL:FO081267 RefSeq:NP_495386.3 UniGene:Cel.30709
ProteinModelPortal:Q22453 SMR:Q22453 STRING:Q22453 PaxDb:Q22453
EnsemblMetazoa:T13C2.4 GeneID:188472 KEGG:cel:CELE_T13C2.4
UCSC:T13C2.4 CTD:188472 WormBase:T13C2.4 InParanoid:Q22453
NextBio:938928 Uniprot:Q22453
Length = 197
Score = 421 (153.3 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 80/152 (52%), Positives = 107/152 (70%)
Query: 84 GTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDK 143
G +DKPN Y+F TTYEDIY DL NKD YT+NGLLHM++RN+RIK +P++FQ +
Sbjct: 47 GPTVDKPNCYEFGPTTYEDIYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQAETRE 106
Query: 144 FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSMFI 203
FDI++ EERV+DQV++ F N+ + PVH+INIDI+DN EEAT GAF ++L
Sbjct: 107 FDIVLCLEERVFDQVVD-FLNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLE 165
Query: 204 KCEDLDNEIDEIMQEFEEKC-SRPLLHTILFY 234
+ ED + +ID+I+ + EE R LLHTI FY
Sbjct: 166 RSEDFEEDIDQIITDLEENNPKRNLLHTICFY 197
Score = 126 (49.4 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDF 56
S L+ AV CSSNMNRSMEAH L K+G +++S+G+G++ +V +C +F
Sbjct: 5 SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEF 58
>UNIPROTKB|G1K158 [details] [associations]
symbol:SSU72 "RNA polymerase II subunit A C-terminal domain
phosphatase SSU72" species:9913 "Bos taurus" [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634 GO:GO:0006397
GO:GO:0004721 PANTHER:PTHR20383 GeneTree:ENSGT00390000010165
OMA:SMEAHNF EMBL:DAAA02043236 Ensembl:ENSBTAT00000003331
Uniprot:G1K158
Length = 168
Score = 490 (177.5 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 94/154 (61%), Positives = 116/154 (75%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A DKPNVYDF TT Y+ +Y DL+ KDK YT+NG+LHML+RNKRIK +PE+FQ K
Sbjct: 18 LPGPAPDKPNVYDFKTT-YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK 76
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E +++ E PVH+IN+DIQDN EEATLGAFL EL
Sbjct: 77 DLFDLILTCEERVYDQVVEDLNSR--EQETCQPVHVINVDIQDNHEEATLGAFLICELCQ 134
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
ED++NEIDE++QEFEEK R LHT+ FY
Sbjct: 135 CIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 168
Score = 49 (22.3 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 26 SKKGVDVKSFGTG 38
SK+G V+SFGTG
Sbjct: 1 SKRGFSVRSFGTG 13
>UNIPROTKB|E1BBD9 [details] [associations]
symbol:LOC617499 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:DAAA02067802 IPI:IPI00703537
Ensembl:ENSBTAT00000025591 Uniprot:E1BBD9
Length = 192
Score = 397 (144.8 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 79/154 (51%), Positives = 108/154 (70%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A D+PNVYDF Y+D+Y+DL+ KDK Y +NG+L MLERN IK +PE+FQE K
Sbjct: 44 LPGPARDRPNVYDFRAM-YDDVYKDLLRKDKERYMQNGVLRMLERN--IKPRPERFQECK 100
Query: 142 DKFDIIITCEERVYDQVLEHFDN-QMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I+TCEERVYDQV+E ++ + + + PVH+IN++I D +EATLGAFL +L
Sbjct: 101 DLFDLILTCEERVYDQVVEDMNSGEQETCQ--PVHVINVNILDTNKEATLGAFLICDLCQ 158
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+++ I E++Q FEEK R LHT+ FY
Sbjct: 159 CVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY 192
Score = 124 (48.7 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 24/34 (70%), Positives = 28/34 (82%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
L++AVVCSSN NRSMEAH LSK+G + SFGTG
Sbjct: 6 LRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTG 39
>UNIPROTKB|A8MSY0 [details] [associations]
symbol:A8MSY0 "Putative RNA polymerase II subunit A
C-terminal domain phosphatase SSU72-like protein 2" species:9606
"Homo sapiens" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634
GO:GO:0005737 GO:GO:0006397 GO:GO:0004721 EMBL:AC018793
eggNOG:COG5211 HOGENOM:HOG000183445 HOVERGEN:HBG059831
PANTHER:PTHR20383 IPI:IPI00399286 ProteinModelPortal:A8MSY0
SMR:A8MSY0 PhosphoSite:A8MSY0 PRIDE:A8MSY0 neXtProt:NX_A8MSY0
InParanoid:A8MSY0 OrthoDB:EOG42V8HC PhylomeDB:A8MSY0
Genevestigator:A8MSY0 Uniprot:A8MSY0
Length = 194
Score = 381 (139.2 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 72/154 (46%), Positives = 106/154 (68%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++P VYDF TTY+++Y DL+ KD+ YTRNG+LH+L RN+RIK PE+FQE
Sbjct: 44 LPGPRPNRPVVYDF-ATTYKEMYNDLLRKDRECYTRNGILHILGRNERIKPGPERFQECT 102
Query: 142 DKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I TCEE VYD V+E + + + PVH+IN++IQD E+ATLGAFL E+
Sbjct: 103 DFFDVIFTCEESVYDTVVEDLCSREQQTFQ--PVHVINMEIQDTLEDATLGAFLICEICQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 161 CLQQSDDMEDNLEELLLQMEEKAGKSFLHTVCFY 194
Score = 129 (50.5 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGT 37
+ S L+VAVVC SN+NRSMEAH+ L KKG+ V+SFGT
Sbjct: 2 LSSTLRVAVVCVSNVNRSMEAHSILRKKGLSVRSFGT 38
>UNIPROTKB|A6NK39 [details] [associations]
symbol:A6NK39 "Putative RNA polymerase II subunit A
C-terminal domain phosphatase SSU72-like protein 1" species:9606
"Homo sapiens" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634
GO:GO:0005737 GO:GO:0006397 GO:GO:0004721 EMBL:AC018793
IPI:IPI00179849 ProteinModelPortal:A6NK39 SMR:A6NK39 PRIDE:A6NK39
neXtProt:NX_A6NK39 eggNOG:COG5211 HOGENOM:HOG000183445
HOVERGEN:HBG059831 InParanoid:A6NK39 OrthoDB:EOG4D26R1
PhylomeDB:A6NK39 Genevestigator:A6NK39 PANTHER:PTHR20383
Uniprot:A6NK39
Length = 194
Score = 385 (140.6 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 73/154 (47%), Positives = 105/154 (68%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++P VYDF TTY+ +Y DL+ KD+ YTRNG+LH+L RN+RIK PE+FQE
Sbjct: 44 LPGPRPNRPVVYDF-ATTYKQMYNDLLRKDRERYTRNGILHILGRNERIKPGPERFQECT 102
Query: 142 DKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I TCEE VYD V+E + + + PVH+IN+DIQD E+ATLGAFL E+
Sbjct: 103 DSFDVIFTCEESVYDTVVEDLCSREQQTFQ--PVHVINMDIQDTLEDATLGAFLICEICQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 161 CLQQSDDIEDNLEELLLQMEEKAGKSFLHTVCFY 194
Score = 124 (48.7 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGT 37
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT
Sbjct: 2 LSSPLRVAVVCVSNVNRSMEAHSILRRKGLSVRSFGT 38
>UNIPROTKB|E1BAB2 [details] [associations]
symbol:E1BAB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004721 "phosphoprotein phosphatase
activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:DAAA02040970 IPI:IPI00907758
ProteinModelPortal:E1BAB2 PRIDE:E1BAB2 Ensembl:ENSBTAT00000023143
OMA:SDDMEDS NextBio:20872366 Uniprot:E1BAB2
Length = 194
Score = 360 (131.8 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 70/155 (45%), Positives = 104/155 (67%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ GTA + P VYDF +TTYE + +DL+ D+ YT NG+LH+L RN+RIK +PE+FQE +
Sbjct: 44 LPGTARNLPVVYDF-STTYEQMRKDLVRIDRERYTSNGILHILGRNERIKPRPERFQECR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATLGAFLASELM 199
D+FD+I TCEE VYD+V+E + + T PV++IN+++ DN E+ATLG+ + EL
Sbjct: 103 DRFDVIFTCEESVYDRVIEEL---WVREQETCQPVYVINVNMDDNTEDATLGSLIICELC 159
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ ED++ + E++ E K R LHT+ FY
Sbjct: 160 ERLQQAEDMEGSLAELLLAVERKTGRSFLHTVCFY 194
Score = 135 (52.6 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDK 40
S LKVAVVC SNMNRSMEAH+ L KKG V+SFG G +
Sbjct: 4 SPLKVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSR 41
>UNIPROTKB|A6NG73 [details] [associations]
symbol:A6NG73 "Putative RNA polymerase II subunit A
C-terminal domain phosphatase SSU72-like protein 3" species:9606
"Homo sapiens" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634
GO:GO:0005737 GO:GO:0006397 GO:GO:0004721 EMBL:CH471070
InterPro:IPR023485 SUPFAM:SSF52788 EMBL:CH236947 HOVERGEN:HBG059831
PANTHER:PTHR20383 EMBL:AC005521 IPI:IPI00375232
ProteinModelPortal:A6NG73 SMR:A6NG73 PRIDE:A6NG73
neXtProt:NX_A6NG73 InParanoid:A6NG73 PhylomeDB:A6NG73
Genevestigator:A6NG73 Uniprot:A6NG73
Length = 194
Score = 365 (133.5 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G + P VYDF TTY+++Y DL+ KD+ YT NG+LH+L RN+RIK PE+FQE
Sbjct: 44 LPGRRPNHPVVYDF-ATTYKEMYNDLLRKDRECYTHNGILHILGRNERIKPGPERFQECT 102
Query: 142 DKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
+ FD+I TCEERVYD V+E + + + PVH+IN+DI+D E A LGAFL E+
Sbjct: 103 EFFDVIFTCEERVYDTVVEDLCSREQQTFQ--PVHVINMDIKDTLEGAILGAFLICEICQ 160
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ +D+++ ++E++ + EEK + LHT+ FY
Sbjct: 161 CLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194
Score = 124 (48.7 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 1 MPSNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGT 37
+ S L+VAVVC SN+NRSMEAH+ L +KG+ V+SFGT
Sbjct: 2 LSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGT 38
>UNIPROTKB|G3MZ63 [details] [associations]
symbol:LOC788349 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:DAAA02040974 OMA:ICELCQR
ProteinModelPortal:G3MZ63 Ensembl:ENSBTAT00000064162 Uniprot:G3MZ63
Length = 194
Score = 360 (131.8 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 69/155 (44%), Positives = 105/155 (67%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A + P VYDF +TTYE++ +DL+ KD+ Y NG+LH+L RN+RIK +PE+FQE +
Sbjct: 44 LPGRARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNGILHILGRNERIKPRPERFQECR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATLGAFLASELM 199
D+FD+I TCEE VYD+V+E + + T PVH+IN+D+ DN E+ATLG+ + EL
Sbjct: 103 DRFDVIFTCEESVYDRVVEEL---WVREQETFQPVHVINVDMADNAEDATLGSLIICELC 159
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ ++L++ + E++ E K + LHT+ FY
Sbjct: 160 ERLQQADNLEDSVVEVLLAAERKTGKSFLHTVCFY 194
Score = 126 (49.4 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 1 MPSNL-KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDK 40
MPS L VAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYLLSVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSR 41
>UNIPROTKB|G5E5U5 [details] [associations]
symbol:G5E5U5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004721 "phosphoprotein phosphatase
activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:DAAA02040978
ProteinModelPortal:G5E5U5 Ensembl:ENSBTAT00000031154 OMA:SFLHTIC
NextBio:20901442 Uniprot:G5E5U5
Length = 194
Score = 356 (130.4 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 69/155 (44%), Positives = 104/155 (67%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A + P VYDF +TTYE++ +DL+ KD Y NG+LH+L RN+RIK +PE+FQE +
Sbjct: 44 LPGRARNLPVVYDF-STTYEEMRKDLVRKDGQRYNSNGILHILGRNERIKPRPERFQECR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATLGAFLASELM 199
D+FD+I TCEE VYD+V+E + + T PVH+IN+D+ DN E+ATLG+ + EL
Sbjct: 103 DRFDVIFTCEESVYDKVVEEL---WVREQETFQPVHVINVDMADNAEDATLGSLIICELC 159
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ ++L++ + E++ E K + LHT+ FY
Sbjct: 160 ERLQQADNLEDSVVEVLLAAERKTGKSFLHTVCFY 194
Score = 128 (50.1 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDK 40
MPS L VAVVC+SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYPLSVAVVCTSNMNRSMEAHRILRRKGFRVRSFGAGSR 41
>UNIPROTKB|G3MZ34 [details] [associations]
symbol:LOC788349 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:DAAA02040971
ProteinModelPortal:G3MZ34 Ensembl:ENSBTAT00000063188 OMA:FIICELC
NextBio:20872810 Uniprot:G3MZ34
Length = 194
Score = 356 (130.4 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 68/155 (43%), Positives = 105/155 (67%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A + P VYDF +TTYE++ +DL+ KD+ Y NG+LH+L RN+RIK +PE+FQE +
Sbjct: 44 LPGRARNLPVVYDF-STTYEEMRKDLVRKDRQRYNSNGILHILGRNERIKPRPERFQECR 102
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENT--PVHLINIDIQDNQEEATLGAFLASELM 199
D+FD+I TC E VYD+V+E + + T PVH+IN+D+ DN E+ATLG+F+ EL
Sbjct: 103 DRFDVIFTCAESVYDRVVEEL---WVREQETFQPVHVINVDMADNAEDATLGSFIICELC 159
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ ++L++ + +++ E K + LHT+ FY
Sbjct: 160 ERLQQADNLEDSLVQVLLAAESKTGKSFLHTVCFY 194
Score = 126 (49.4 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 1 MPSN-LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDK 40
MPS L VAVVC SNMNRSMEAH L +KG V+SFG G +
Sbjct: 1 MPSYPLSVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSR 41
>UNIPROTKB|F1MS03 [details] [associations]
symbol:F1MS03 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004721 "phosphoprotein phosphatase
activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:DAAA02067807 IPI:IPI00703172
Ensembl:ENSBTAT00000000739 Uniprot:F1MS03
Length = 182
Score = 379 (138.5 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 75/154 (48%), Positives = 108/154 (70%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A D+PNVYDF TT +++Y+DL+ KDK Y +NG+L MLERNK IK +PE+FQ+ K
Sbjct: 35 LPGPARDRPNVYDFRTTC-DEMYKDLLRKDKEMYMQNGVLWMLERNKSIKPRPERFQDCK 93
Query: 142 DKFDIIITCEERVYDQVLEHFDN-QMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
D FD+I++CEERVYDQV+E ++ + + + PVH+IN+D +EATLGAFL +L
Sbjct: 94 DPFDLILSCEERVYDQVVEDMNSGEQETCQ--PVHVINVD---THKEATLGAFLICDLCQ 148
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
D+++ I +++Q F+EK R LHT+ FY
Sbjct: 149 CVQLMGDMEDGISKLLQVFQEKSGRSFLHTVCFY 182
Score = 100 (40.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 1 MPS-NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWE 46
MPS +L++ VVCS+N N SME H LSK G +VK G +P ++
Sbjct: 1 MPSLSLRLTVVCSNNQNWSMEVHDILSKTGTNVKLPGPARDRPNVYD 47
>UNIPROTKB|F1RF63 [details] [associations]
symbol:LOC100524945 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:CU467106 RefSeq:XP_003129660.1
Ensembl:ENSSSCT00000016140 GeneID:100524945 KEGG:ssc:100524945
OMA:ICELCQR Uniprot:F1RF63
Length = 195
Score = 315 (115.9 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 64/154 (41%), Positives = 97/154 (62%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G A +P +Y F T Y + +DL D Y RNG+LH+L RN+RIK PE+FQ+ +
Sbjct: 45 LPGPAHHRPVLYSFRTP-YRQMRRDLAWLDPDCYRRNGILHLLGRNERIKPCPERFQDCR 103
Query: 142 DKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMS 200
+ FD+I TCEE VYD+V+ H + + + PVH+IN+D+QD+ E+ATLG+ + EL
Sbjct: 104 EAFDVIFTCEESVYDRVVGHLCAREQETCQ--PVHVINVDMQDDLEDATLGSLVICELCQ 161
Query: 201 MFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
+ ED+++ + E++ E K R LHT+ FY
Sbjct: 162 RLQQAEDMEDCLAELLLGVERKTGRSFLHTVCFY 195
Score = 137 (53.3 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 1 MPSN--LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
MPS+ L+VAVVC SNMNRSMEAH+ LSKKG V+SFG G
Sbjct: 1 MPSSAPLRVAVVCMSNMNRSMEAHSILSKKGFRVRSFGAG 40
>DICTYBASE|DDB_G0272871 [details] [associations]
symbol:ssu72 "RNA polymerase II subunit A C-terminal
domain phosphatase" species:44689 "Dictyostelium discoideum"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR006811 Pfam:PF04722 dictyBase:DDB_G0272871
GO:GO:0005634 GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0004721
EMBL:AAFI02000008 eggNOG:COG5211 PANTHER:PTHR20383 KO:K15544
OMA:SMEAHNF RefSeq:XP_644923.1 ProteinModelPortal:Q558Z3
STRING:Q558Z3 EnsemblProtists:DDB0202722 GeneID:8618602
KEGG:ddi:DDB_G0272871 ProtClustDB:CLSZ2431262 Uniprot:Q558Z3
Length = 214
Score = 327 (120.2 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 65/155 (41%), Positives = 104/155 (67%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++ +PN++ F T Y++IY L N+D+ Y RNGLL+MLERN +KL PEK+QE +
Sbjct: 61 LPGPSIHQPNIFSFGTP-YQEIYTSLKNQDQELYIRNGLLNMLERNISVKLAPEKWQEEQ 119
Query: 142 D-KFDIIITCEERVYDQVLEHFDNQMISLENT-PVHLINIDIQDNQEEATLGAFLASELM 199
KF+I+ T ++RVYD V+E + +S PVH+IN+ ++D EEA GA A E+
Sbjct: 120 QSKFEIVYTFDQRVYDAVIEDLLQRDVSSSLLQPVHIINLQVKDTHEEAVGGAQHALEIT 179
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
S+ K + + ++D+I+++F ++ SR LHT++FY
Sbjct: 180 SIIEKTLNWEEKLDQILEDFYKQTSRQFLHTLMFY 214
Score = 95 (38.5 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGV-DVKSFGT 37
N ++A+VC+SN NRS+EAH K G +++SFGT
Sbjct: 21 NKRIAMVCASNQNRSLEAHHLFVKNGFKNIRSFGT 55
>POMBASE|SPAC3G9.04 [details] [associations]
symbol:ssu72 "phosphoric ester hydrolase Ssu72
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=ISO] [GO:0042578 "phosphoric
ester hydrolase activity" evidence=ISO] InterPro:IPR006811
Pfam:PF04722 PomBase:SPAC3G9.04 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0006352 GO:GO:0004721
GO:GO:0005847 GO:GO:0006369 GO:GO:0042578 eggNOG:COG5211
HOGENOM:HOG000183445 PANTHER:PTHR20383 KO:K15544 OMA:SMEAHNF
PIR:T11640 RefSeq:NP_594076.1 ProteinModelPortal:O42868
STRING:O42868 EnsemblFungi:SPAC3G9.04.1 GeneID:2543452
KEGG:spo:SPAC3G9.04 OrthoDB:EOG4DFSXT NextBio:20804465
Uniprot:O42868
Length = 197
Score = 305 (112.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 63/155 (40%), Positives = 100/155 (64%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++DKPN+Y F Y++IY++L +D YT NGLL ML+RN+RIK P ++Q+
Sbjct: 45 LPGPSIDKPNIYQFGYP-YDEIYKELEAQDSRLYTANGLLKMLDRNRRIKRAPCRWQDQD 103
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
++I+ITCEER YD + E + +L N PV+LIN+DI+DN EEA++G +L++
Sbjct: 104 SIYNIVITCEERCYDAICEDLYRRGETL-NRPVYLINVDIKDNHEEASVGGKAILDLVNK 162
Query: 202 FIKCED-LDNEIDEIMQEFEEKCSR-PLLHTILFY 234
+ +D L+ IM +F+ + P+L+TI F+
Sbjct: 163 LTEAQDKLEELFPSIMADFQSNHPKLPVLYTIHFF 197
Score = 115 (45.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
+NL+++V+C+SN NRSMEAH L G V SFGTG
Sbjct: 5 TNLQISVICASNQNRSMEAHNVLKNAGYQVDSFGTG 40
>TAIR|locus:2027789 [details] [associations]
symbol:AT1G73820 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=RCA] InterPro:IPR006811 Pfam:PF04722
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009507
GO:GO:0006397 GO:GO:0004721 EMBL:AC012679 eggNOG:COG5211
HOGENOM:HOG000183445 PANTHER:PTHR20383 KO:K15544 OMA:SMEAHNF
EMBL:BT005558 EMBL:AK119020 IPI:IPI00531322 PIR:F96765
RefSeq:NP_177523.1 UniGene:At.34950 ProteinModelPortal:Q9C9T0
SMR:Q9C9T0 STRING:Q9C9T0 PaxDb:Q9C9T0 PRIDE:Q9C9T0
EnsemblPlants:AT1G73820.1 GeneID:843718 KEGG:ath:AT1G73820
TAIR:At1g73820 InParanoid:Q9C9T0 PhylomeDB:Q9C9T0
ProtClustDB:CLSN2679894 ArrayExpress:Q9C9T0 Genevestigator:Q9C9T0
Uniprot:Q9C9T0
Length = 193
Score = 295 (108.9 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 60/155 (38%), Positives = 101/155 (65%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++ +PNVYDF T Y+ ++ +L KD Y RNG+L M++RN +KL P+++Q++
Sbjct: 41 LPGPSLREPNVYDFGTP-YKQMFDELRRKDPELYKRNGILQMIKRNLSVKLAPQRWQDNA 99
Query: 142 DK--FDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELM 199
FD+++T EE+V+D VLE +N+ SL T + ++N++++DN EEA +G LA EL
Sbjct: 100 GDGVFDVVMTFEEKVFDSVLEDLNNREQSLTKT-ILVMNLEVKDNHEEAAIGGRLALELC 158
Query: 200 SMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
E ++ ID+I+ FE++ R L+++I FY
Sbjct: 159 QEIEGNETWEDTIDDIVAGFEKQHRRKLVYSISFY 193
Score = 120 (47.3 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 6 KVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
+ A+VCSSN NRSMEAHA L ++G+DV S+GTG
Sbjct: 4 RYAMVCSSNQNRSMEAHALLKRQGLDVASYGTG 36
>SGD|S000005166 [details] [associations]
symbol:SSU72 "Phosphatase and transcription/RNA-processing
factor" species:4932 "Saccharomyces cerevisiae" [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA;IPI] [GO:0031564 "transcription antitermination"
evidence=IMP] [GO:0004722 "protein serine/threonine phosphatase
activity" evidence=IMP;IDA] [GO:0070940 "dephosphorylation of RNA
polymerase II C-terminal domain" evidence=IMP;IDA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IMP]
[GO:0008420 "CTD phosphatase activity" evidence=IMP;IDA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA;IGI]
[GO:0005634 "nucleus" evidence=IEA;IGI;IPI] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030846 "termination of RNA polymerase II
transcription, poly(A)-coupled" evidence=IMP;IPI] [GO:0030847
"termination of RNA polymerase II transcription, exosome-dependent"
evidence=IMP;IPI] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0009302 "snoRNA
transcription" evidence=IMP] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=ISS;IDA] [GO:0001174
"transcriptional start site selection at RNA polymerase II
promoter" evidence=IGI;IMP] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0031124
"mRNA 3'-end processing" evidence=IMP] [GO:0006379 "mRNA cleavage"
evidence=IMP] InterPro:IPR006811 Pfam:PF04722 SGD:S000005166
EMBL:BK006947 GO:GO:0004725 GO:GO:0006368 EMBL:U20390 GO:GO:0005847
GO:GO:0006379 GO:GO:0031124 GO:GO:0008420 GO:GO:0030846
GO:GO:0070940 GO:GO:0030847 GO:GO:0031564 eggNOG:COG5211
HOGENOM:HOG000183445 PANTHER:PTHR20383 KO:K15544
GeneTree:ENSGT00390000010165 OMA:SMEAHNF OrthoDB:EOG4DFSXT
EMBL:Z71498 EMBL:AY558421 PIR:S63180 RefSeq:NP_014177.1
ProteinModelPortal:P53538 SMR:P53538 DIP:DIP-6700N IntAct:P53538
MINT:MINT-432815 STRING:P53538 PaxDb:P53538 PeptideAtlas:P53538
EnsemblFungi:YNL222W GeneID:855499 KEGG:sce:YNL222W CYGD:YNL222w
NextBio:979493 Genevestigator:P53538 GermOnline:YNL222W
GO:GO:0009302 GO:GO:0001174 Uniprot:P53538
Length = 206
Score = 288 (106.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 69/162 (42%), Positives = 97/162 (59%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++DKPNVY F T Y DIY DL+++ Y NGLL ML+RN+R+K PEK+QES
Sbjct: 47 LPGLSIDKPNVYSFGTP-YNDIYNDLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQEST 105
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASELMSM 201
FD + TCEER +D V E N+ L N VH+IN+DI+D+ E A +G+ EL M
Sbjct: 106 KVFDFVFTCEERCFDAVCEDLMNRGGKL-NKIVHVINVDIKDDDENAKIGSKAILELADM 164
Query: 202 FI----KCE--DLDNE--IDEIMQEFEEKCSR-PLLHTILFY 234
+CE D+ E I +I+ E++ S+ P L+ +Y
Sbjct: 165 LNDKIEQCEKDDIPFEDCIMDILTEWQSSHSQLPSLYAPSYY 206
Score = 110 (43.8 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 3 SNLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
SNLK VC+SN NRSME+H L + G +V S+GTG
Sbjct: 7 SNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTG 42
>ASPGD|ASPL0000012150 [details] [associations]
symbol:AN3810 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008420 "CTD phosphatase activity" evidence=IEA] [GO:0004725
"protein tyrosine phosphatase activity" evidence=IEA] [GO:0031124
"mRNA 3'-end processing" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0031564 "transcription antitermination" evidence=IEA]
[GO:0001174 "transcriptional start site selection at RNA polymerase
II promoter" evidence=IEA] [GO:0030846 "termination of RNA
polymerase II transcription, poly(A)-coupled" evidence=IEA]
[GO:0070940 "dephosphorylation of RNA polymerase II C-terminal
domain" evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IEA]
[GO:0030847 "termination of RNA polymerase II transcription,
exosome-dependent" evidence=IEA] [GO:0009302 "snoRNA transcription"
evidence=IEA] InterPro:IPR006811 Pfam:PF04722 GO:GO:0005634
GO:GO:0006397 EMBL:BN001302 GO:GO:0004721 HOGENOM:HOG000183445
PANTHER:PTHR20383 EnsemblFungi:CADANIAT00004902 OMA:CEERCWD
Uniprot:C8V6T1
Length = 263
Score = 284 (105.0 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 52/117 (44%), Positives = 82/117 (70%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESK 141
+ G ++ +PNVY+F++T+Y +Y +L++KD+ Y NG+L+ML+RN+ +K PE+FQ+
Sbjct: 90 LPGPSITQPNVYNFNSTSYSQMYDELLSKDERLYRNNGILNMLDRNRNVKWGPERFQDWG 149
Query: 142 DKFDIIITCEERVYDQVLEHFDNQMISLENTPVHLINIDIQDNQEEATLGAFLASEL 198
D+IITCEER +D V++ N+ +L N PVH+ N+DI+DN EEA +G EL
Sbjct: 150 GVVDVIITCEERCWDAVVDDLLNKGSTL-NRPVHVFNVDIKDNHEEALVGGKAILEL 205
Score = 84 (34.6 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 5 LKVAVVCSSNMNRSMEAHAYLSKKG--VDVKSFGTG 38
L+ VC+SN NRSMEAH LS V SFGTG
Sbjct: 50 LRFCTVCASNQNRSMEAHLRLSTAASPFPVISFGTG 85
>CGD|CAL0001446 [details] [associations]
symbol:SSU72 species:5476 "Candida albicans" [GO:0005847
"mRNA cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031124 "mRNA
3'-end processing" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0031564 "transcription antitermination" evidence=IEA]
[GO:0030846 "termination of RNA polymerase II transcription,
poly(A)-coupled" evidence=IEA] [GO:0001174 "transcriptional start
site selection at RNA polymerase II promoter" evidence=IEA]
[GO:0070940 "dephosphorylation of RNA polymerase II C-terminal
domain" evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IEA]
[GO:0030847 "termination of RNA polymerase II transcription,
exosome-dependent" evidence=IEA] [GO:0009302 "snoRNA transcription"
evidence=IEA] [GO:0008420 "CTD phosphatase activity" evidence=IEA]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA]
InterPro:IPR006811 Pfam:PF04722 CGD:CAL0001446 GO:GO:0005634
GO:GO:0006397 GO:GO:0004721 EMBL:AACQ01000131 EMBL:AACQ01000130
eggNOG:COG5211 HOGENOM:HOG000183445 PANTHER:PTHR20383 KO:K15544
RefSeq:XP_713235.1 RefSeq:XP_713287.1 ProteinModelPortal:Q59UG2
STRING:Q59UG2 GeneID:3645062 GeneID:3645129 KEGG:cal:CaO19.2402
KEGG:cal:CaO19.9939 Uniprot:Q59UG2
Length = 226
Score = 250 (93.1 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 54/130 (41%), Positives = 83/130 (63%)
Query: 82 ITGTAMDKPNVYDFHTTTYEDIYQDLMN-KDKAFYTRNGLLHMLERNKRIKLKPEKFQES 140
+ G ++DKPNVY+F T Y+ +Y DL++ K + Y NGL+HMLERNK +K PEK+ +
Sbjct: 47 LPGPSVDKPNVYEFGTP-YQVMYDDLISQKSRKLYESNGLIHMLERNKSVKEAPEKWHRN 105
Query: 141 KD--KFDIIITCEERVYDQVLEHFDNQMISLENTP-------VHLINIDIQDNQEEATLG 191
KFD++ITCEER +D V++ ++M + + VH+INIDI+D+ E A +G
Sbjct: 106 APLGKFDLVITCEERCFDSVIDDLMHRMYDRDPSDNDDVKRLVHVINIDIKDDNENAIIG 165
Query: 192 AFLASELMSM 201
+L++M
Sbjct: 166 GKGILKLVNM 175
Score = 109 (43.4 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 4 NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTG 38
+LK+ VC+SN NRSME+H L G DV SFGTG
Sbjct: 8 SLKICTVCASNNNRSMESHKQLMDAGYDVHSFGTG 42
>UNIPROTKB|F1RF65 [details] [associations]
symbol:LOC100737070 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR006811 Pfam:PF04722
GO:GO:0005634 GO:GO:0006397 GO:GO:0004721 PANTHER:PTHR20383
GeneTree:ENSGT00390000010165 EMBL:CU915729
Ensembl:ENSSSCT00000016138 Uniprot:F1RF65
Length = 111
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 47/113 (41%), Positives = 75/113 (66%)
Query: 123 MLERNKRIKLKPEKFQESKDKFDIIITCEERVYDQVLEHF-DNQMISLENTPVHLINIDI 181
+L RN+ IK PE+FQ+ ++ FD+I TCEE VYD+V+ H + + + PVH+IN+D+
Sbjct: 1 LLGRNEHIKPCPERFQDCREAFDVIFTCEESVYDRVVGHLCAREQETCQ--PVHVINVDM 58
Query: 182 QDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
QD+ E+ATLG+ + EL + +D++N + E++ E+K R LHT+ FY
Sbjct: 59 QDDLEDATLGSLVLCELCQRLQQVDDMENCLAELLLGVEQKTGRSFLHTVCFY 111
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 234 0.00087 113 3 11 22 0.37 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 599 (64 KB)
Total size of DFA: 198 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.64u 0.13s 23.77t Elapsed: 00:00:01
Total cpu time: 23.65u 0.13s 23.78t Elapsed: 00:00:01
Start: Thu Aug 15 11:55:38 2013 End: Thu Aug 15 11:55:39 2013