RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9210
         (234 letters)



>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus
           aureus [TaxId: 1280]}
          Length = 130

 Score = 27.9 bits (61), Expect = 0.61
 Identities = 11/127 (8%), Positives = 31/127 (24%), Gaps = 15/127 (11%)

Query: 6   KVAVVCSSNMNRSMEAHAYLSKKG---VDVKSFGTGDKKPQQWESVVIFHCCDFCSELIP 62
            +  + + N  RS  A  +  +      +V S G             +       S    
Sbjct: 4   TIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTS 63

Query: 63  LFFHKVFVFQI------------SVNLFFQSITGTAMDKPNVYDFHTTTYEDIYQDLMNK 110
                  + Q             +  +   ++        +      + ++ +  ++   
Sbjct: 64  DLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLA 123

Query: 111 DKAFYTR 117
            + F  R
Sbjct: 124 IEKFKLR 130


>g1q7l.1 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 280

 Score = 27.4 bits (60), Expect = 1.6
 Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 176 LINID-IQDNQEEATLGAFLASELMSMFIKCEDLDNEIDEIMQEFEEKCSRPLLHTILFY 234
            + I  +Q   +     AF       + + C+ ++     ++       + P L +IL  
Sbjct: 13  YLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLN 72


>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose
          oxidoreductase, N-terminal domain {Zymomonas mobilis
          [TaxId: 542]}
          Length = 221

 Score = 27.0 bits (58), Expect = 2.1
 Identities = 5/59 (8%), Positives = 18/59 (30%), Gaps = 2/59 (3%)

Query: 1  MPSN--LKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFC 57
          MP +     A+V       +     +   +   +++  +G+ +  +  +          
Sbjct: 28 MPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKI 86


>d1d1qa_ c.44.1.1 (A:) Tyrosine phosphatase {Baker's yeast
          (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 159

 Score = 26.4 bits (57), Expect = 2.6
 Identities = 13/74 (17%), Positives = 21/74 (28%), Gaps = 9/74 (12%)

Query: 5  LKVAVVCSSNMNRSMEAHAYL---------SKKGVDVKSFGTGDKKPQQWESVVIFHCCD 55
          + VA +   N  RS  A A             +   + SFGT +    +         C 
Sbjct: 6  ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICK 65

Query: 56 FCSELIPLFFHKVF 69
               I     ++ 
Sbjct: 66 QHGVKINHKGKQIK 79


>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
           {Crithidia fasciculata [TaxId: 5656]}
          Length = 240

 Score = 25.7 bits (55), Expect = 4.8
 Identities = 15/150 (10%), Positives = 35/150 (23%)

Query: 28  KGVDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTAM 87
           K      +            V         + +  +     F +++       +      
Sbjct: 37  KHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIA 96

Query: 88  DKPNVYDFHTTTYEDIYQDLMNKDKAFYTRNGLLHMLERNKRIKLKPEKFQESKDKFDII 147
            K         +YE ++ D               +     +          E+ D   I+
Sbjct: 97  AKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYIL 156

Query: 148 ITCEERVYDQVLEHFDNQMISLENTPVHLI 177
           +          +E   +Q + LE   V + 
Sbjct: 157 LATGSWPQHLGIEVPRSQTLQLEKAGVEVA 186


>d1y1la_ c.44.1.1 (A:) Arsenate reductase ArsC {Archaeoglobus
          fulgidus [TaxId: 2234]}
          Length = 124

 Score = 25.2 bits (54), Expect = 4.8
 Identities = 12/75 (16%), Positives = 18/75 (24%), Gaps = 1/75 (1%)

Query: 6  KVAVVCSSNMNRSMEAHAYLSKKG-VDVKSFGTGDKKPQQWESVVIFHCCDFCSELIPLF 64
          KV  VC  N  RS+ A A  +             +K  +  E+V                
Sbjct: 1  KVLFVCIHNTARSVMAEALFNAMAKSWKAESAGVEKAERVDETVKRLLAERGLKAKEKPR 60

Query: 65 FHKVFVFQISVNLFF 79
                      +  
Sbjct: 61 TVDEVNLDDFDLIVT 75


>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
           CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
           [TaxId: 10090]}
          Length = 107

 Score = 25.0 bits (54), Expect = 4.9
 Identities = 11/71 (15%), Positives = 18/71 (25%), Gaps = 3/71 (4%)

Query: 49  VIFHCCDFCSELIPLFFHKVFVFQISVNLFFQSITGTAMDKPNVYDFHTTTYEDIY---Q 105
           V+    +    L    ++K     I   +               Y      Y +     Q
Sbjct: 17  VLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQ 76

Query: 106 DLMNKDKAFYT 116
            +  KD   YT
Sbjct: 77  MITMKDMGVYT 87


>d1jl3a_ c.44.1.1 (A:) Arsenate reductase ArsC {Bacillus subtilis
          [TaxId: 1423]}
          Length = 137

 Score = 25.3 bits (54), Expect = 5.3
 Identities = 7/54 (12%), Positives = 16/54 (29%)

Query: 4  NLKVAVVCSSNMNRSMEAHAYLSKKGVDVKSFGTGDKKPQQWESVVIFHCCDFC 57
          N  +  +C+ N  RS  A  +  +   D     +   +        +    +  
Sbjct: 1  NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVG 54


>d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus
          [TaxId: 5724]}
          Length = 146

 Score = 24.3 bits (52), Expect = 9.0
 Identities = 10/56 (17%), Positives = 16/56 (28%), Gaps = 4/56 (7%)

Query: 6  KVAVVCSSNMNRSMEAHAYL----SKKGVDVKSFGTGDKKPQQWESVVIFHCCDFC 57
           V  VC  N+ RS             K +   +  +G    Q  ++     C    
Sbjct: 6  AVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNG 61


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.406 

Gapped
Lambda     K      H
   0.267   0.0524    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 888,223
Number of extensions: 41458
Number of successful extensions: 160
Number of sequences better than 10.0: 1
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 24
Length of query: 234
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 152
Effective length of database: 1,281,736
Effective search space: 194823872
Effective search space used: 194823872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.9 bits)