Query psy9220
Match_columns 464
No_of_seqs 119 out of 1372
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 21:59:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swo_A Glutaryl-COA dehydrogen 100.0 1.4E-67 4.9E-72 546.1 42.6 394 1-464 3-397 (399)
2 3ii9_A Glutaryl-COA dehydrogen 100.0 2.1E-68 7.1E-73 551.9 35.2 388 15-464 7-395 (396)
3 3p4t_A Putative acyl-COA dehyd 100.0 3.9E-66 1.3E-70 536.2 44.4 383 18-463 17-403 (403)
4 3sf6_A Glutaryl-COA dehydrogen 100.0 4.3E-66 1.5E-70 535.9 44.4 383 16-464 19-402 (403)
5 2ix5_A Acyl-coenzyme A oxidase 100.0 4.9E-66 1.7E-70 541.1 44.3 382 19-464 47-428 (436)
6 2d29_A Acyl-COA dehydrogenase; 100.0 8.5E-66 2.9E-70 530.6 44.8 381 23-460 3-385 (387)
7 3pfd_A Acyl-COA dehydrogenase; 100.0 1.8E-66 6.1E-71 536.9 39.2 380 19-460 11-393 (393)
8 2eba_A Putative glutaryl-COA d 100.0 6.4E-66 2.2E-70 531.2 43.0 380 19-464 3-385 (385)
9 1ukw_A Acyl-COA dehydrogenase; 100.0 7.4E-66 2.5E-70 529.6 43.1 376 23-460 1-378 (379)
10 1buc_A Butyryl-COA dehydrogena 100.0 1.8E-65 6.3E-70 527.2 44.1 378 23-460 1-383 (383)
11 2vig_A Short-chain specific ac 100.0 2.7E-65 9.2E-70 527.8 43.6 377 23-460 2-380 (391)
12 2jif_A Short/branched chain sp 100.0 3.1E-65 1.1E-69 529.8 43.5 377 22-460 24-402 (404)
13 1siq_A GCD, glutaryl-COA dehyd 100.0 2.4E-65 8.1E-70 528.1 42.1 386 15-464 2-388 (392)
14 3r7k_A Probable acyl COA dehyd 100.0 2.7E-65 9.2E-70 529.9 42.5 376 23-461 25-403 (403)
15 1egd_A Medium chain acyl-COA d 100.0 4.1E-65 1.4E-69 527.2 42.7 381 22-461 11-393 (396)
16 2dvl_A Acyl-COA dehydrogenase; 100.0 4.5E-65 1.5E-69 522.6 42.3 369 26-460 2-372 (372)
17 3nf4_A Acyl-COA dehydrogenase; 100.0 5.1E-65 1.8E-69 524.6 42.6 373 24-460 13-387 (387)
18 2pg0_A Acyl-COA dehydrogenase; 100.0 2.5E-64 8.4E-69 519.4 44.7 373 25-458 8-383 (385)
19 1ivh_A Isovaleryl-COA dehydrog 100.0 1.2E-64 4.2E-69 523.3 41.7 377 25-460 11-391 (394)
20 1rx0_A Acyl-COA dehydrogenase 100.0 3E-64 1E-68 520.4 42.8 375 23-460 15-392 (393)
21 3mpi_A Glutaryl-COA dehydrogen 100.0 1.1E-64 3.7E-69 523.9 37.6 379 23-464 1-387 (397)
22 4hr3_A Putative acyl-COA dehyd 100.0 1.8E-64 6.2E-69 525.3 37.9 380 22-461 4-411 (415)
23 1r2j_A Protein FKBI; polyketid 100.0 3.6E-64 1.2E-68 515.0 38.0 361 36-463 2-366 (366)
24 3owa_A Acyl-COA dehydrogenase; 100.0 2.3E-63 7.7E-68 538.8 40.9 374 23-460 29-424 (597)
25 2z1q_A Acyl-COA dehydrogenase; 100.0 3.2E-62 1.1E-66 528.7 39.2 379 17-460 19-414 (577)
26 2uxw_A VERY-long-chain specifi 100.0 1.1E-60 3.8E-65 518.8 41.6 385 16-456 35-426 (607)
27 3mkh_A Nitroalkane oxidase; ox 100.0 1.3E-60 4.5E-65 499.5 37.6 388 22-461 2-417 (438)
28 2wbi_A Acyl-COA dehydrogenase 100.0 3.6E-61 1.2E-65 502.8 32.2 383 18-461 14-419 (428)
29 2c12_A Nitroalkane oxidase; ox 100.0 1.4E-59 4.8E-64 492.0 39.5 388 23-463 2-421 (439)
30 3mxl_A Nitrososynthase; flavin 100.0 4.4E-59 1.5E-63 480.9 32.0 369 22-462 4-395 (395)
31 3m9v_A FAD-dependent oxidoredu 100.0 3E-57 1E-61 474.2 35.7 373 19-463 12-407 (439)
32 2or0_A Hydroxylase; APC7385, r 100.0 9.3E-57 3.2E-61 467.1 31.9 367 22-463 13-404 (414)
33 2rfq_A 3-HSA hydroxylase, oxyg 100.0 1.4E-55 4.8E-60 454.8 34.1 353 33-463 11-389 (394)
34 2jbr_A P-hydroxyphenylacetate 100.0 1.3E-55 4.5E-60 459.7 32.1 355 32-464 38-418 (422)
35 1w07_A Acyl-COA oxidase; oxido 100.0 6.4E-51 2.2E-55 446.2 30.2 378 12-461 13-441 (659)
36 3djl_A Protein AIDB; alpha hel 100.0 2.1E-48 7.1E-53 417.0 35.9 328 61-462 88-443 (541)
37 2ddh_A Acyl-COA oxidase; beta 100.0 4.6E-47 1.6E-51 415.5 33.2 362 28-461 26-438 (661)
38 2yyk_A 4-hydroxyphenylacetate- 100.0 1.5E-36 5.1E-41 321.0 30.6 317 62-458 78-422 (481)
39 1u8v_A Gamma-aminobutyrate met 100.0 1.2E-36 4.3E-41 322.1 28.3 268 119-445 119-413 (490)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 4E-31 1.4E-35 280.3 29.2 273 123-458 127-430 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 1.1E-26 3.8E-31 246.5 26.1 249 127-436 134-400 (517)
42 3owa_A Acyl-COA dehydrogenase; 92.0 1.4 4.8E-05 47.1 13.3 122 334-459 466-590 (597)
43 2uxw_A VERY-long-chain specifi 66.1 35 0.0012 36.3 11.4 85 335-421 491-576 (607)
44 2z1q_A Acyl-COA dehydrogenase; 57.2 1.5E+02 0.0053 30.9 14.4 100 353-460 469-569 (577)
No 1
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.4e-67 Score=546.12 Aligned_cols=394 Identities=44% Similarity=0.733 Sum_probs=367.4
Q ss_pred CCcccccccccCcccCcccccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC
Q psy9220 1 MSLFRPLLRSYSTKFNWEDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~ 80 (464)
||+..|.. ..++++.|+.+|++.++++++++++.+++|+++++.|...+.++.+.+| +++|+.+++.||+++.+ +
T Consensus 3 m~~~~~~~---~~~~~~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~l~~-~ 77 (399)
T 3swo_A 3 MTLTAPSK---KSTYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLP-SELAKEFGNLGVLGMHL-Q 77 (399)
T ss_dssp -----------CCCCCHHHHHTGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-TTHHHHHHHHTCTTTTS-C
T ss_pred cCccCCCc---CccccccccccCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCC-HHHHHHHHHCCCCcCCh-h
Confidence 67776733 3447788888999999999999999999999999998888888889999 99999999999999999 8
Q ss_pred -CCCCCCCHHHHHHHHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccc
Q psy9220 81 -YGCAGASHISGGLVAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANM 159 (464)
Q Consensus 81 -~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~ 159 (464)
|||.|+++.+...++|++++.|+++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++||
T Consensus 78 e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gs----- 152 (399)
T 3swo_A 78 GYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGS----- 152 (399)
T ss_dssp STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSS-----
T ss_pred hhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCC-----
Confidence 99999999999999999999999988777777667778899999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCC
Q psy9220 160 QTRCFGLTEPNAGSDVANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGA 239 (464)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (464)
|+..++|+|+++ ++||+|||+|.|||+++.||+++|+|+++ .
T Consensus 153 --------------d~~~~~t~A~~~--~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~-~--------------------- 194 (399)
T 3swo_A 153 --------------NPAGMRTRARRD--GSDWILNGTKMWITNGNLADVATVWAQTD-D--------------------- 194 (399)
T ss_dssp --------------CGGGCCCEEEEE--TTEEEEEEEEEEEETTTTCSEEEEEEBCT-T---------------------
T ss_pred --------------CCccceEEEEEe--CCEEEEEEEEEeECCCCccCEEEEEEEeC-C---------------------
Confidence 999999999999 89999999999999999999999999875 2
Q ss_pred CchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccccChHHHHHh
Q psy9220 240 PLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLANSYKAPFTL 319 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~g~~~~~~~ 319 (464)
++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||...|+......
T Consensus 195 ----------------------g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~ 252 (399)
T 3swo_A 195 ----------------------GIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSC 252 (399)
T ss_dssp ----------------------SCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTTCCSTHHHHHH
T ss_pred ----------------------ceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCCChhHHHHHHH
Confidence 4789999999999999999999999999999999999999999999983399999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9220 320 LNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISI 399 (464)
Q Consensus 320 l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~ 399 (464)
+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|..+++++|++++++++.++.+.+....+++
T Consensus 253 l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~ 332 (399)
T 3swo_A 253 LNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISL 332 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCCC
Q psy9220 400 LKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQAF 464 (464)
Q Consensus 400 aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~~ 464 (464)
+|.++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..|+|.++|+|+|
T Consensus 333 aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~p~~ 397 (399)
T 3swo_A 333 GKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAF 397 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999987
No 2
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=2.1e-68 Score=551.89 Aligned_cols=388 Identities=57% Similarity=0.942 Sum_probs=362.1
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHH
Q psy9220 15 FNWEDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGL 93 (464)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~ 93 (464)
.-|.++..|++.++++++++++.+++|+++.+.|...+.++.+.+| +++|+.+++.||+++.+|+ |||.|+++.+...
T Consensus 7 ~~~~~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~ 85 (396)
T 3ii9_A 7 FHWDDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTD-AAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGL 85 (396)
T ss_dssp CCTTSTTCGGGGSCHHHHHHHHHHHHHCCCCCHHHHHHHHHHTCCC-THHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHH
T ss_pred CCCCcccccCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCC-HHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHH
Confidence 5588888999999999999999999999999998888888899999 9999999999999999998 9999999999999
Q ss_pred HHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCC
Q psy9220 94 VAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGS 173 (464)
Q Consensus 94 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~ 173 (464)
++|++++.|.++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++||
T Consensus 86 v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gs------------------- 146 (396)
T 3ii9_A 86 IAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGS------------------- 146 (396)
T ss_dssp HHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC----------------------
T ss_pred HHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCC-------------------
Confidence 9999999999888777777666566788999999999999999999999999999999999
Q ss_pred CCCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhccc
Q psy9220 174 DVANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCED 253 (464)
Q Consensus 174 d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (464)
|+..++|+|+++ +|||+|||+|.|||+++.||+++|.|+++++
T Consensus 147 d~~~~~t~A~~~--~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~----------------------------------- 189 (396)
T 3ii9_A 147 DPGSMVTRARKV--PGGYSLSGSKMWITNSPIADVFVVWAKLDED----------------------------------- 189 (396)
T ss_dssp ---CCCCEEEEE--TTEEEEEEEEEEEETGGGCSEEEEEEEEEET-----------------------------------
T ss_pred ChhhCeeEEEEe--CCEEEEEEEEEeECCCccCCEEEEEEEecCC-----------------------------------
Confidence 999999999998 8999999999999999999999999998622
Q ss_pred CCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccccChHHHHHhhhHHHHHHHHHHHH
Q psy9220 254 ATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLANSYKAPFTLLNSARYGIAWGVLG 333 (464)
Q Consensus 254 ~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~g~~~~~~~l~~~r~~~aa~~~G 333 (464)
+.+++++|+||++.|||++.+.|+++|++++++++++||||+||++++|+...|+......+...|+.+++.++|
T Consensus 190 -----g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G 264 (396)
T 3ii9_A 190 -----GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFTCLNSARYGIAWGALG 264 (396)
T ss_dssp -----TEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 113589999999999999999999999999999999999999999999987449999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q psy9220 334 AAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIAR 413 (464)
Q Consensus 334 ~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~ 413 (464)
+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.+|.+.+....++++|.++++.+.++++
T Consensus 265 ~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~ 344 (396)
T 3ii9_A 265 AAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIAR 344 (396)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888899999999999999999
Q ss_pred HHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCCC
Q psy9220 414 NARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQAF 464 (464)
Q Consensus 414 ~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~~ 464 (464)
.++|++||.||+++++++|+|||++...+++|++++++..|+|.++|+|+|
T Consensus 345 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llglp~~ 395 (396)
T 3ii9_A 345 LARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTGIQAF 395 (396)
T ss_dssp HHHHHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHSCCCC
T ss_pred HHHHhhCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999999999999999997
No 3
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=3.9e-66 Score=536.19 Aligned_cols=383 Identities=24% Similarity=0.361 Sum_probs=358.1
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHH
Q psy9220 18 EDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAR 96 (464)
Q Consensus 18 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e 96 (464)
.++..|+..++++++++++.+++|+++.+.|...+.++.+.+| +++|+.|++.||+++.+|+ |||.|+++.+...++|
T Consensus 17 ~~~~~M~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 95 (403)
T 3p4t_A 17 QGPGSMSIWTTAEREALRKTVRAFAEREVLPHAHEWERAGEIP-RELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICE 95 (403)
T ss_dssp ------CTTSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCC-HHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCC-HHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 4566788889999999999999999999999999999999999 9999999999999999998 9999999999999999
Q ss_pred HHHhcCCch-hhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCC
Q psy9220 97 EIERVDSGY-RSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDV 175 (464)
Q Consensus 97 ~l~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~ 175 (464)
++++.|.++ ++.+.++..++...+..+|+++||++||+++++|+.++|+++|||++|| |+
T Consensus 96 el~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gs-------------------d~ 156 (403)
T 3p4t_A 96 EMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGS-------------------DV 156 (403)
T ss_dssp HHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSS-------------------CG
T ss_pred HHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCC-------------------Cc
Confidence 999999998 7667777656667888999999999999999999999999999999999 99
Q ss_pred CCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCC
Q psy9220 176 ANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDAT 255 (464)
Q Consensus 176 ~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
..++|+|+++ ++||+|||+|.|||++..||+++|+|+++++
T Consensus 157 ~~~~t~A~~~--~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~------------------------------------- 197 (403)
T 3p4t_A 157 GHLRTRADLD--GDHYVINGAKTYITSGVRADYVVTAARTGGP------------------------------------- 197 (403)
T ss_dssp GGCCCEEEEE--TTEEEEEEEEEEEETTTTCSEEEEEEECSSS-------------------------------------
T ss_pred ccceEEEEEe--CCEEEEEEEEEEecCCcccCEEEEEEEeCCC-------------------------------------
Confidence 9999999999 8999999999999999999999999998632
Q ss_pred CCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHH
Q psy9220 256 HGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGA 334 (464)
Q Consensus 256 ~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~ 334 (464)
+.+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||..+ |+......+...|+.+++.++|+
T Consensus 198 ---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 274 (403)
T 3p4t_A 198 ---GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAG 274 (403)
T ss_dssp ---SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 12368999999999999999999999999999999999999999999999877 88889999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhHHHHHHHHHHHHHHHHHH
Q psy9220 335 AEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDT-PEMISILKRNNCAKALDIAR 413 (464)
Q Consensus 335 a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~-~~~~~~aK~~~~~~a~~v~~ 413 (464)
++++++.+++|+++|++||+||+++|.+|++|++|..+++++|++++++++.++.+.+. ...++++|.++++.+.++++
T Consensus 275 a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~ 354 (403)
T 3p4t_A 275 AQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVAN 354 (403)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988766 77899999999999999999
Q ss_pred HHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCC
Q psy9220 414 NARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQA 463 (464)
Q Consensus 414 ~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~ 463 (464)
.++|++||.||+++++++|+|||++...+++|++++++..|++.+ |+|.
T Consensus 355 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l-glps 403 (403)
T 3p4t_A 355 QAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL-GFQS 403 (403)
T ss_dssp HHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH-TTTC
T ss_pred HHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc-CCCC
Confidence 999999999999999999999999999999999999999999999 9874
No 4
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-66 Score=535.86 Aligned_cols=383 Identities=45% Similarity=0.762 Sum_probs=363.0
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHH
Q psy9220 16 NWEDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLV 94 (464)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v 94 (464)
...++..|++.++++++++++.+++|+++++.|...+.++.+.+|.+++|++|++.||+++.+ + |||.|+++.+...+
T Consensus 19 ~~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v 97 (403)
T 3sf6_A 19 GADDLIGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGLA 97 (403)
T ss_dssp CHHHHHTCGGGSCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHH
T ss_pred CCcchhccCCCCCHHHHHHHHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHH
Confidence 444566788899999999999999999999999888888888777568999999999999999 8 99999999999999
Q ss_pred HHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCC
Q psy9220 95 AREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSD 174 (464)
Q Consensus 95 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d 174 (464)
+|++++.|+++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++|| |
T Consensus 98 ~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gs-------------------d 158 (403)
T 3sf6_A 98 CLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGS-------------------D 158 (403)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSS-------------------C
T ss_pred HHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCC-------------------C
Confidence 999999999988777777666778899999999999999999999999999999999999 9
Q ss_pred CCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccC
Q psy9220 175 VANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDA 254 (464)
Q Consensus 175 ~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (464)
+..++|+|+++ ++||+|||+|.|||+++.||+++|+|+++ +
T Consensus 159 ~~~~~t~A~~~--~~g~~lnG~K~~is~a~~Ad~~~v~ar~~-~------------------------------------ 199 (403)
T 3sf6_A 159 PAGMRTRATRS--GDDWILTGTKMWITNGSVADVAVVWARTD-E------------------------------------ 199 (403)
T ss_dssp GGGCCCEEEEE--TTEEEEEEEEEEEETGGGCSEEEEEEEET-T------------------------------------
T ss_pred chhcEEEEEEE--CCEEEEEEEEEeecCCcccCEEEEEEEeC-C------------------------------------
Confidence 99999999999 89999999999999999999999999985 2
Q ss_pred CCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccccChHHHHHhhhHHHHHHHHHHHHH
Q psy9220 255 THGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLANSYKAPFTLLNSARYGIAWGVLGA 334 (464)
Q Consensus 255 ~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~g~~~~~~~l~~~r~~~aa~~~G~ 334 (464)
++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||...|+......+...|+.+++.++|+
T Consensus 200 -------g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~ 272 (403)
T 3sf6_A 200 -------GIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRCLNEARFGIVFGALGA 272 (403)
T ss_dssp -------EEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------ceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999984499999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy9220 335 AEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARN 414 (464)
Q Consensus 335 a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~ 414 (464)
++++++.+++|+++|++||+||+++|.+|++|++|..+++++|++++++++.++.+.+....++++|.++++.+.++++.
T Consensus 273 a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~ 352 (403)
T 3sf6_A 273 ARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKLNNVREAIEIART 352 (403)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988878888999999999999999999
Q ss_pred HHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCCC
Q psy9220 415 ARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQAF 464 (464)
Q Consensus 415 a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~~ 464 (464)
++|++||.||+++++++|+|||++...+++|++++++..|+|.++|+|+|
T Consensus 353 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llgl~~~ 402 (403)
T 3sf6_A 353 ARTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTGVGAF 402 (403)
T ss_dssp HHHHHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHhcCCeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999999999987
No 5
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=4.9e-66 Score=541.07 Aligned_cols=382 Identities=36% Similarity=0.584 Sum_probs=358.7
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy9220 19 DALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRGYGCAGASHISGGLVAREI 98 (464)
Q Consensus 19 ~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~~GG~g~~~~~~~~v~e~l 98 (464)
++.+|++.+++|++++++.+++|+++.+.|...+.++.+.+| .++|+.|++.||+++.+|+|||.|+++.+...++|++
T Consensus 47 ~~~~~~~~l~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~p-~~~~~~l~e~Gl~~l~~pe~GG~G~~~~~~~~v~eel 125 (436)
T 2ix5_A 47 DYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFP-FHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEI 125 (436)
T ss_dssp CTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-GGGHHHHHTTTCTTTTCCSTTCCCCCHHHHHHHHHHH
T ss_pred chhhcCCCCCHHHHHHHHHHHHHHHhhCChhhHHHHhcCCCC-HHHHHHHHHcCCCcCcCCCCCCCCCCHHHHHHHHHHH
Confidence 455566779999999999999999999988877777778899 9999999999999999999999999999999999999
Q ss_pred HhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCc
Q psy9220 99 ERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANM 178 (464)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~ 178 (464)
++.|.++++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|| |+..+
T Consensus 126 a~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GS-------------------d~~~~ 186 (436)
T 2ix5_A 126 ARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGS-------------------DASGL 186 (436)
T ss_dssp HHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSS-------------------CGGGC
T ss_pred HhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCC-------------------Ccccc
Confidence 99999887666777666777888999999999999999999999999999999999 88899
Q ss_pred eeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCC
Q psy9220 179 QTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGP 258 (464)
Q Consensus 179 ~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
+|+|+++ +|||+|||+|.|||+++.||+++|+|+++++
T Consensus 187 ~t~A~~~--gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~---------------------------------------- 224 (436)
T 2ix5_A 187 GTTATKV--EGGWKINGQKRWIGNSTFADLLIIFARNTTT---------------------------------------- 224 (436)
T ss_dssp CCEEEEE--TTEEEEEEEEEEEETTTTCSEEEEEEEETTT----------------------------------------
T ss_pred eEEEEEe--CCEEEEeeeccCCCCCcccCEEEEEEEECCC----------------------------------------
Confidence 9999999 8999999999999999999999999998532
Q ss_pred CCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccccChHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy9220 259 QNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLANSYKAPFTLLNSARYGIAWGVLGAAEFC 338 (464)
Q Consensus 259 ~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~a 338 (464)
.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||..+++......+..+|+.+++.++|+++++
T Consensus 225 --~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~a 302 (436)
T 2ix5_A 225 --NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGI 302 (436)
T ss_dssp --SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 157899999999999999999999999999999999999999999998777888888899999999999999999999
Q ss_pred HHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy9220 339 FSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDM 418 (464)
Q Consensus 339 l~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~ 418 (464)
++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|+
T Consensus 303 l~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a~e~a~~v~~~a~q~ 382 (436)
T 2ix5_A 303 YDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGREL 382 (436)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877667789999999999999999999999
Q ss_pred hCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCCC
Q psy9220 419 LGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQAF 464 (464)
Q Consensus 419 ~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~~ 464 (464)
+||.||+++++++|+|||++...+++|++++++..|+|.++|+++|
T Consensus 383 ~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llgl~~~ 428 (436)
T 2ix5_A 383 LGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASF 428 (436)
T ss_dssp TGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCC
T ss_pred hCccccccCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999999999999999999999999875
No 6
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=8.5e-66 Score=530.62 Aligned_cols=381 Identities=25% Similarity=0.366 Sum_probs=355.2
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhc
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERV 101 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~ 101 (464)
|++.+++++.++++.+++|+++.+.|...+.++.+.+| +++|+.+++.||+++.+|+ |||.|+++.+...++|++++.
T Consensus 3 m~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~ 81 (387)
T 2d29_A 3 LWFEEGAEERQVLGPFREFLKAEVAPGAAERDRTGAFP-WDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYY 81 (387)
T ss_dssp CTTSCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHCCCC-HHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhcCCCC-HHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhh
Confidence 67779999999999999999999999888888889999 9999999999999999998 999999999999999999999
Q ss_pred CCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeE
Q psy9220 102 DSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTR 181 (464)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~ 181 (464)
|+++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~~t~ 142 (387)
T 2d29_A 82 DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGS-------------------DAAALKTK 142 (387)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSS-------------------SGGGCCCE
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCC-------------------CHhhCceE
Confidence 99888766776555667888999999999999999999999999999999999 99999999
Q ss_pred EEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCC
Q psy9220 182 AKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNP 261 (464)
Q Consensus 182 A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
|+++ ++||+|||+|.|||+++.||+++|+|+++++.. ..++.+
T Consensus 143 A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~-----------------------------------~~~~~~ 185 (387)
T 2d29_A 143 AEKV--EGGWRLNGTKQFITQGSVAGVYVVMARTDPPPS-----------------------------------PERKHQ 185 (387)
T ss_dssp EEEE--TTEEEEEEEEEEEETTTTCSEEEEEEECSCCSC-----------------------------------GGGTTT
T ss_pred EEEe--CCEEEEEeEEeccCCCCcCCEEEEEEEeCCccc-----------------------------------cCCCCC
Confidence 9999 899999999999999999999999999863300 001234
Q ss_pred CeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy9220 262 QIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFS 340 (464)
Q Consensus 262 ~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 340 (464)
++++|+||++.|||++.+.|+++|++++++++++||||+||++++||.++ |+......+...|+.+++.++|+++++++
T Consensus 186 g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 265 (387)
T 2d29_A 186 GISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAALD 265 (387)
T ss_dssp TEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999877 88888888999999999999999999999
Q ss_pred HHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy9220 341 MARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLG 420 (464)
Q Consensus 341 ~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~G 420 (464)
.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++|
T Consensus 266 ~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~G 345 (387)
T 2d29_A 266 YALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILG 345 (387)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999987766778999999999999999999999999
Q ss_pred cccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 421 GNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 421 g~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
|.||+++++++|+|||++...+++|++++++..|++.+++
T Consensus 346 g~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~ 385 (387)
T 2d29_A 346 GYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLE 385 (387)
T ss_dssp GGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred CeecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999876
No 7
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.8e-66 Score=536.91 Aligned_cols=380 Identities=25% Similarity=0.387 Sum_probs=346.2
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHH
Q psy9220 19 DALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVARE 97 (464)
Q Consensus 19 ~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~ 97 (464)
++..|++.++++++++++.+++|+++.+.|...+.++.+.+| +++|++|++.||+++.+|+ |||.|+++.+...++|+
T Consensus 11 ~p~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~ee 89 (393)
T 3pfd_A 11 NPSFELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFP-EEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEE 89 (393)
T ss_dssp -----------CHHHHHHHHHHHHHHHTGGGHHHHHHTTCCC-HHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred CCcccCCCCCHHHHHHHHHHHHHHHHhCchHHHHHhhhCCCC-HHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHH
Confidence 344578889999999999999999999999988899999999 9999999999999999998 99999999999999999
Q ss_pred HHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCC
Q psy9220 98 IERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVAN 177 (464)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~ 177 (464)
+++.|.++++.+..+. +....+..+|+++||++|||++++|+.++|+++|||++|| |+..
T Consensus 90 la~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gs-------------------d~~~ 149 (393)
T 3pfd_A 90 VARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGS-------------------DAAS 149 (393)
T ss_dssp HHTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSS-------------------CGGG
T ss_pred HHhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCC-------------------Cccc
Confidence 9999999887555553 4445688899999999999999999999999999999999 9999
Q ss_pred ceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCC
Q psy9220 178 MQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHG 257 (464)
Q Consensus 178 ~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
++|+|+++ +|||+|||+|.|+|+++.||+++|+|+++++
T Consensus 150 ~~t~A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~--------------------------------------- 188 (393)
T 3pfd_A 150 MRTRAVAD--GDDWILNGSKCWITNGGKSTWYTVMAVTDPD--------------------------------------- 188 (393)
T ss_dssp CCCEEEEE--TTEEEEEEEEEEEETTTTCSEEEEEEESCGG---------------------------------------
T ss_pred CeeEEEEc--CCEEEEeeEEEEecCCcccCEEEEEEEeCCC---------------------------------------
Confidence 99999999 8999999999999999999999999998643
Q ss_pred CCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHH
Q psy9220 258 PQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAE 336 (464)
Q Consensus 258 ~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~ 336 (464)
++.+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++ |+......+...|+.+++.++|+++
T Consensus 189 ~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~ 268 (393)
T 3pfd_A 189 KGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQ 268 (393)
T ss_dssp GGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122468999999999999999999999999999999999999999999999877 8999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHHHH
Q psy9220 337 FCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLD-TPEMISILKRNNCAKALDIARNA 415 (464)
Q Consensus 337 ~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~-~~~~~~~aK~~~~~~a~~v~~~a 415 (464)
++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+ ....++++|.++++.+.++++.+
T Consensus 269 ~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a 348 (393)
T 3pfd_A 269 GALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVTTDA 348 (393)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988765 66789999999999999999999
Q ss_pred HHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 416 RDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 416 ~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
+|++||.||+++++++|+|||++...+++|++++++..|+|.++|
T Consensus 349 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 349 VQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp HHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred HHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999986
No 8
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=6.4e-66 Score=531.18 Aligned_cols=380 Identities=46% Similarity=0.754 Sum_probs=354.2
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHH
Q psy9220 19 DALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVARE 97 (464)
Q Consensus 19 ~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~ 97 (464)
++..|++.++++++++++.+++|+++.+.|...+.++.+.+| .++|+++++.||+++.+|+ |||.|+++.+...++|+
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 81 (385)
T 2eba_A 3 DFYALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFP-THLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYE 81 (385)
T ss_dssp CTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC-GGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHhCCccHHHHHHhCCCC-HHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHH
Confidence 334567778999999999999999999988888888888999 9999999999999999998 99999999999999999
Q ss_pred HHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCC-C
Q psy9220 98 IERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDV-A 176 (464)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~-~ 176 (464)
+++.|+++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++|| |+ .
T Consensus 82 la~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~ 142 (385)
T 2eba_A 82 LERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGS-------------------DPYG 142 (385)
T ss_dssp HHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTT-------------------STTT
T ss_pred HHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCC-------------------Cccc
Confidence 999999998777777666667788999999999999999999999999999999999 98 8
Q ss_pred CceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCC
Q psy9220 177 NMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATH 256 (464)
Q Consensus 177 ~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
.++|+|+++ ++||+|||+|.|||+++.||+++|+|+++ +
T Consensus 143 ~~~t~A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~-~-------------------------------------- 181 (385)
T 2eba_A 143 NMKTRARRE--GDTWVLNGTKMWITNGNLAHLAVIWAKDE-G-------------------------------------- 181 (385)
T ss_dssp TCCCEEEC----CEEEEEEEEEEEETTTTCSEEEEEEECC----------------------------------------
T ss_pred cCeeEEEEe--CCEEEEEeeeeccCCCcccCEEEEEEEeC-C--------------------------------------
Confidence 899999998 89999999999999999999999999975 2
Q ss_pred CCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHH
Q psy9220 257 GPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAA 335 (464)
Q Consensus 257 ~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a 335 (464)
+ .+++|+||++.||+++.+.|+++|+++++++++.||||+||++++| ..+ |+......+...|+.+++.++|++
T Consensus 182 --g--~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~~r~~~aa~~~G~a 256 (385)
T 2eba_A 182 --G--EVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKAPLSCLTQARFGIAWGAMGAL 256 (385)
T ss_dssp ------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C--cEEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2789999999999999999999999999999999999999999999 444 888888889999999999999999
Q ss_pred HHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy9220 336 EFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNA 415 (464)
Q Consensus 336 ~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a 415 (464)
+++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.+
T Consensus 257 ~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~v~~~a 336 (385)
T 2eba_A 257 EAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMA 336 (385)
T ss_dssp HHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877777789999999999999999999
Q ss_pred HHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCCC
Q psy9220 416 RDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQAF 464 (464)
Q Consensus 416 ~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~~ 464 (464)
+|++||.||+++++++|+|||++...+++|++++++..+++.++|+|.+
T Consensus 337 ~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llgl~~~ 385 (385)
T 2eba_A 337 RDILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITGLNAF 385 (385)
T ss_dssp HHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHhCCcccCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999999999999999999999999999999864
No 9
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=7.4e-66 Score=529.62 Aligned_cols=376 Identities=27% Similarity=0.440 Sum_probs=353.0
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhc
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERV 101 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~ 101 (464)
|++.+++++..+++.+++|+++.+.|...+.++.+.+| .++|+++.+.||+++.+|+ |||.|+++.+...++|++++.
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~ 79 (379)
T 1ukw_A 1 IDFSLTEEQRQLQALARRFAKEVILPVAQEYDEKEEVP-WPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYA 79 (379)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTGGGHHHHHHHTCCC-HHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCC-HHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999888888888999 9999999999999999998 999999999999999999999
Q ss_pred CCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeE
Q psy9220 102 DSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTR 181 (464)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~ 181 (464)
|+++++.+.+| .++...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|+
T Consensus 80 ~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~~t~ 139 (379)
T 1ukw_A 80 CMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGS-------------------DAAALKTR 139 (379)
T ss_dssp CHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSS-------------------CGGGCCCE
T ss_pred CchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCc-------------------ChhhCeEE
Confidence 99988766666 45667788999999999999999999999999999999998 88999999
Q ss_pred EEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCC
Q psy9220 182 AKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNP 261 (464)
Q Consensus 182 A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
|+++ ++||+|||+|.|||+++.||+++|+|+++++ ++.+
T Consensus 140 A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~---------------------------------------~~~~ 178 (379)
T 1ukw_A 140 AIRQ--GDHYVLNGTKMWISNGGEAEWVVVFATVNPE---------------------------------------LRHK 178 (379)
T ss_dssp EEEE--TTEEEEEEEEEEEETTTTEEEEEEEEESCGG---------------------------------------GGGG
T ss_pred EEEe--CCEEEEEEEEecccCCCcCCEEEEEEEcCCC---------------------------------------CCCC
Confidence 9999 8999999999999999999999999998532 1123
Q ss_pred CeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy9220 262 QIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFS 340 (464)
Q Consensus 262 ~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 340 (464)
++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||..+ |+......+...|+.+++.++|+++++++
T Consensus 179 g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 258 (379)
T 1ukw_A 179 GVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALD 258 (379)
T ss_dssp GEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999877 88888888999999999999999999999
Q ss_pred HHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy9220 341 MARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLG 420 (464)
Q Consensus 341 ~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~G 420 (464)
.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++|
T Consensus 259 ~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~G 338 (379)
T 1ukw_A 259 EARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAIQIHG 338 (379)
T ss_dssp HHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999887777778999999999999999999999999
Q ss_pred cccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 421 GNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 421 g~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
|.||+++++++|+|||++...+++|++++++..|++.+++
T Consensus 339 g~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 339 GYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp GGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred CeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999876
No 10
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.8e-65 Score=527.17 Aligned_cols=378 Identities=31% Similarity=0.470 Sum_probs=354.5
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCC---CCHHHHHHHHHHH
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAG---ASHISGGLVAREI 98 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g---~~~~~~~~v~e~l 98 (464)
|++.++++++++++.+++|+++.+.|...+.++.+.+| +++|+++++.||+++.+|+ |||.| +++.+...++|++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel 79 (383)
T 1buc_A 1 MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYD-KELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEEL 79 (383)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTTTTHHHHHHHTCCC-HHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCC-HHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHH
Confidence 45678999999999999999999999888888889999 9999999999999999998 99999 9999999999999
Q ss_pred HhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCc
Q psy9220 99 ERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANM 178 (464)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~ 178 (464)
++.|+++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++|| |+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~ 140 (383)
T 1buc_A 80 AKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGT-------------------DASGQ 140 (383)
T ss_dssp HHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSS-------------------CGGGC
T ss_pred HhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCC-------------------ChhhC
Confidence 99999988777777556667888999999999999999999999999999999999 88899
Q ss_pred eeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCC
Q psy9220 179 QTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGP 258 (464)
Q Consensus 179 ~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
+|+|++++ ++||+|||+|.|||+++.||+++|+|+++++ +
T Consensus 141 ~t~A~~~~-~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~---------------------------------------~ 180 (383)
T 1buc_A 141 QTIATKND-DGTYTLNGSKIFITNGGAADIYIVFAMTDKS---------------------------------------K 180 (383)
T ss_dssp CCEEEECT-TSCEEEEEEEEEEETTTTCSEEEEEEESCSS---------------------------------------S
T ss_pred EeEEEEcC-CCEEEEEEEEeccCCCCcCCEEEEEEEeCCC---------------------------------------C
Confidence 99999864 5789999999999999999999999998633 1
Q ss_pred CCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHH
Q psy9220 259 QNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEF 337 (464)
Q Consensus 259 ~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~ 337 (464)
+.+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++ |+......+...|+.+++.++|++++
T Consensus 181 ~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~ 260 (383)
T 1buc_A 181 GNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEA 260 (383)
T ss_dssp STTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23468999999999999999999999999999999999999999999999877 88888888999999999999999999
Q ss_pred HHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy9220 338 CFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARD 417 (464)
Q Consensus 338 al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~ 417 (464)
+++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|
T Consensus 261 al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q 340 (383)
T 1buc_A 261 ALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEAVQ 340 (383)
T ss_dssp HHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777788999999999999999999999
Q ss_pred HhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 418 MLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 418 ~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
++||.||+++++++|+|||++...+++|++++++..|++.++|
T Consensus 341 ~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 341 IFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp HHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred hcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999875
No 11
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=2.7e-65 Score=527.76 Aligned_cols=377 Identities=28% Similarity=0.455 Sum_probs=351.6
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhc
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERV 101 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~ 101 (464)
|++.+++++.++++.+++|+++.+.|...+.++.+.+| +++|+.+++.||+++.+|+ |||.|+++.+...++|++++.
T Consensus 2 ~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~ 80 (391)
T 2vig_A 2 QSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFP-AAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRG 80 (391)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCC-HHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCcccHHHHHhcCCCC-HHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhh
Confidence 55678999999999999999999999888888889999 9999999999999999998 999999999999999999999
Q ss_pred CCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeE
Q psy9220 102 DSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTR 181 (464)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~ 181 (464)
|+++++.+.+|..+....+..+|+++||++|||++++|+.++|+++|||++|| |+..++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~~t~ 141 (391)
T 2vig_A 81 CASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGS-------------------DAGAASTT 141 (391)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSS-------------------SGGGCCCE
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCC-------------------CcccceeE
Confidence 99888777776545667888999999999999999999999999999999999 99999999
Q ss_pred EEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCC
Q psy9220 182 AKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNP 261 (464)
Q Consensus 182 A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
|+++ ++||+|||+|.|||+++.||+++|+|+++++ ++.+
T Consensus 142 A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~---------------------------------------~~~~ 180 (391)
T 2vig_A 142 ARAE--GDSWVLNGTKAWITNAWEASAAVVFASTDRA---------------------------------------LQNK 180 (391)
T ss_dssp EEEE--TTEEEEEEEEEEEETTTTCSEEEEEEECCSS---------------------------------------STTS
T ss_pred EEEe--CCEEEEeeEEEeecCCCcCCEEEEEEEeCCC---------------------------------------CCCC
Confidence 9999 8999999999999999999999999998532 1224
Q ss_pred CeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy9220 262 QIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFS 340 (464)
Q Consensus 262 ~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 340 (464)
++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++ |+......+...|+.+++.++|+++++++
T Consensus 181 g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 260 (391)
T 2vig_A 181 SISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALD 260 (391)
T ss_dssp CEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999877 88888888999999999999999999999
Q ss_pred HHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy9220 341 MARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLG 420 (464)
Q Consensus 341 ~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~G 420 (464)
.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++|
T Consensus 261 ~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~G 340 (391)
T 2vig_A 261 CAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILG 340 (391)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999987766778999999999999999999999999
Q ss_pred cccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 421 GNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 421 g~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
|.||+.+++++|+|||++...+++|++++++..|++.+++
T Consensus 341 g~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~ 380 (391)
T 2vig_A 341 GMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLR 380 (391)
T ss_dssp GGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHH
T ss_pred CeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999875
No 12
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=3.1e-65 Score=529.81 Aligned_cols=377 Identities=30% Similarity=0.471 Sum_probs=353.0
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHh
Q psy9220 22 NISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIER 100 (464)
Q Consensus 22 ~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~ 100 (464)
.|.+.+++|++++++.+++|+++.+.|...+.++.+.+| +++|++|++.||+++.+|+ |||.|+++.+...++|++++
T Consensus 24 ~~~~~~~~e~~~l~~~~r~~~~~~~~p~~~~~d~~~~~~-~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~ 102 (404)
T 2jif_A 24 APLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKME-KSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAK 102 (404)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHTCCC-HHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCC-HHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHh
Confidence 455678999999999999999999999888888888999 9999999999999999998 99999999999999999999
Q ss_pred cCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCcee
Q psy9220 101 VDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQT 180 (464)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t 180 (464)
.|+++++.+.+|..++..++..+|+++||++|||++++|. ++++++|||++|| |+..++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gs-------------------d~~~~~t 162 (404)
T 2jif_A 103 VDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGS-------------------DSFALKT 162 (404)
T ss_dssp TCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSS-------------------SGGGCCC
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCC-------------------Chhhcee
Confidence 9999887777776666778889999999999999999986 7899999999999 8889999
Q ss_pred EEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCC
Q psy9220 181 RAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQN 260 (464)
Q Consensus 181 ~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
+|+++ +++|+|||+|.|||+++.||+++|+|+++++ ++.
T Consensus 163 ~A~~~--g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~~---------------------------------------~~~ 201 (404)
T 2jif_A 163 RADKE--GDYYVLNGSKMWISSAEHAGLFLVMANVDPT---------------------------------------IGY 201 (404)
T ss_dssp EEEEE--TTEEEEEEEEEEEETTTTCSEEEEEEESCGG---------------------------------------GGG
T ss_pred EEEEe--CCEEEEEeEEEeecCCcccCEEEEEEEeCCC---------------------------------------CCC
Confidence 99999 8999999999999999999999999998532 122
Q ss_pred CCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy9220 261 PQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCF 339 (464)
Q Consensus 261 ~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al 339 (464)
.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||..+ |+......+..+|+.+++.++|++++++
T Consensus 202 ~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al 281 (404)
T 2jif_A 202 KGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCF 281 (404)
T ss_dssp GGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999877 8888888899999999999999999999
Q ss_pred HHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9220 340 SMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDML 419 (464)
Q Consensus 340 ~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~ 419 (464)
+.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++
T Consensus 282 ~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~e~a~~v~~~a~q~~ 361 (404)
T 2jif_A 282 DYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWM 361 (404)
T ss_dssp HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998877677899999999999999999999999
Q ss_pred CcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 420 GGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 420 Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
||.||+++++++|+|||++...+++|++++++..|++.+++
T Consensus 362 Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~ 402 (404)
T 2jif_A 362 GGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDA 402 (404)
T ss_dssp GGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred CcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999864
No 13
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=2.4e-65 Score=528.14 Aligned_cols=386 Identities=61% Similarity=1.027 Sum_probs=359.7
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHH
Q psy9220 15 FNWEDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGL 93 (464)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~ 93 (464)
+++.++..|++.+++|++++++.+++|+++.+.|...+.++.+.+| +++|+.+++.||+++.+ + |||.|+++.+...
T Consensus 2 ~~~~~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~ 79 (392)
T 1siq_A 2 FDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFH-REIISEMGELGVLGPTI-KGYGCAGVSSVAYGL 79 (392)
T ss_dssp CCTTSTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-THHHHHHHHTTCSSTTC-EETTEECCCHHHHHH
T ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHHHhcCcchHHHHhhCCCC-HHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHH
Confidence 4556666788889999999999999999999988877888888899 99999999999999999 8 9999999999999
Q ss_pred HHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCC
Q psy9220 94 VAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGS 173 (464)
Q Consensus 94 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~ 173 (464)
++|++++.|+++++.+.++..++...+..+|+++||++|+|++++|+.++|+++|||++||
T Consensus 80 ~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gs------------------- 140 (392)
T 1siq_A 80 LARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGS------------------- 140 (392)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSS-------------------
T ss_pred HHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCc-------------------
Confidence 9999999999887666666555666788899999999999999999999999999999999
Q ss_pred CCCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhccc
Q psy9220 174 DVANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCED 253 (464)
Q Consensus 174 d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (464)
|+..++|+|+++++++||+|||+|.|||+++.||+++|+|+++++
T Consensus 141 d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~~g----------------------------------- 185 (392)
T 1siq_A 141 DPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDG----------------------------------- 185 (392)
T ss_dssp CGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEETTS-----------------------------------
T ss_pred CccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEECCC-----------------------------------
Confidence 888999999987556899999999999999999999999998532
Q ss_pred CCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccccChHHHHHhhhHHHHHHHHHHHH
Q psy9220 254 ATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLANSYKAPFTLLNSARYGIAWGVLG 333 (464)
Q Consensus 254 ~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~g~~~~~~~l~~~r~~~aa~~~G 333 (464)
++++|+||++.|||++.+.|+++|+++++++++.||||+||++++++...|+......+...|+.+++.++|
T Consensus 186 --------~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G 257 (392)
T 1siq_A 186 --------CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFGCLNNARYGIAWGVLG 257 (392)
T ss_dssp --------CEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcccCHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999987668888888889999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q psy9220 334 AAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIAR 413 (464)
Q Consensus 334 ~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~ 413 (464)
+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++
T Consensus 258 ~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~~~~~~a~~v~~ 337 (392)
T 1siq_A 258 ASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIAR 337 (392)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998777777899999999999999999
Q ss_pred HHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCCCCC
Q psy9220 414 NARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGIQAF 464 (464)
Q Consensus 414 ~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~~ 464 (464)
.++|++||.||+++++++|+|||++...+++|++++++..+++.++|+|.|
T Consensus 338 ~a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llgl~~~ 388 (392)
T 1siq_A 338 QARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAF 388 (392)
T ss_dssp HHHHHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999999999999999875
No 14
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=2.7e-65 Score=529.92 Aligned_cols=376 Identities=27% Similarity=0.399 Sum_probs=353.6
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhc
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERV 101 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~ 101 (464)
++..++++++++++.+++|+++.+.|...+.++.+.+| +++|+++++.||+++.+|+ |||.|+++.+...++|++++.
T Consensus 25 ~~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~ 103 (403)
T 3r7k_A 25 PEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIP-RDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAA 103 (403)
T ss_dssp CGGGGCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCC-THHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCC-HHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhc
Confidence 34558999999999999999999999988888899999 9999999999999999998 999999999999999999998
Q ss_pred -CCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCcee
Q psy9220 102 -DSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQT 180 (464)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t 180 (464)
|+++++.+.++..++...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gs-------------------d~~~~~t 164 (403)
T 3r7k_A 104 GGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGS-------------------DVANLRT 164 (403)
T ss_dssp TCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSS-------------------CGGGCCC
T ss_pred CCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCC-------------------ChhhceE
Confidence 88877666656556777888999999999999999999999999999999999 9999999
Q ss_pred EEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCC
Q psy9220 181 RAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQN 260 (464)
Q Consensus 181 ~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
+|+++ ++||+|||+|.|||+++.||+++|+|++++. +.
T Consensus 165 ~A~~~--~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~----------------------------------------~~ 202 (403)
T 3r7k_A 165 RAVRE--GDTYVVNGAKTFITSGVRADFVTTAVRTGGP----------------------------------------GY 202 (403)
T ss_dssp EEEEC--SSEEEEEEEEEEEETTTTCSEEEEEEECSSS----------------------------------------SG
T ss_pred EEEEE--CCEEEEEEEEEcccCCccCCEEEEEEEcCCC----------------------------------------CC
Confidence 99998 8999999999999999999999999998532 12
Q ss_pred CCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy9220 261 PQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCF 339 (464)
Q Consensus 261 ~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al 339 (464)
+++++|+||++.|||++.+.|+++|++++++++++||||+||++++||..+ |+......+...|+.+++.++|++++++
T Consensus 203 ~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al 282 (403)
T 3r7k_A 203 GGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRAL 282 (403)
T ss_dssp GGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999877 8899999999999999999999999999
Q ss_pred HHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9220 340 SMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDML 419 (464)
Q Consensus 340 ~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~ 419 (464)
+.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++
T Consensus 283 ~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~ 362 (403)
T 3r7k_A 283 DLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIF 362 (403)
T ss_dssp HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999877778899999999999999999999999
Q ss_pred CcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCC
Q psy9220 420 GGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGI 461 (464)
Q Consensus 420 Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~ 461 (464)
||.||+++++++|+|||++...+++|++++++..|+|.+ ||
T Consensus 363 Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l-gl 403 (403)
T 3r7k_A 363 GGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI-GL 403 (403)
T ss_dssp GGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH-C-
T ss_pred CCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh-cC
Confidence 999999999999999999999999999999999999987 54
No 15
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=4.1e-65 Score=527.19 Aligned_cols=381 Identities=28% Similarity=0.410 Sum_probs=353.9
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHh
Q psy9220 22 NISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIER 100 (464)
Q Consensus 22 ~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~ 100 (464)
.|++.+++++.++++.+++|+++.+.|...+.++.+.+| +++|+++++.||+++.+|+ |||.|+++.+...++|++++
T Consensus 11 ~m~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 89 (396)
T 1egd_A 11 GFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYP-VPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAY 89 (396)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHCCCC-HHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCC-HHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHh
Confidence 467789999999999999999999988888888889999 9999999999999999998 99999999999999999999
Q ss_pred cCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCcee
Q psy9220 101 VDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQT 180 (464)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t 180 (464)
.|+++++.+ .|..++...|..+|+++||++|||++++|+.++|+++|||++|| |+..++|
T Consensus 90 ~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~~t 149 (396)
T 1egd_A 90 GCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGS-------------------DVAGIKT 149 (396)
T ss_dssp HCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSS-------------------SGGGCCC
T ss_pred hCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCc-------------------chhhCee
Confidence 999887665 56555666688999999999999999999999999999999999 8889999
Q ss_pred EEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCC
Q psy9220 181 RAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQN 260 (464)
Q Consensus 181 ~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
+|+++ ++||+|||+|.|||+++.||+++|+|+++++.. .++.
T Consensus 150 ~A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~------------------------------------~~~~ 191 (396)
T 1egd_A 150 KAEKK--GDEYIINGQKMWITNGGKANWYFLLARSDPDPK------------------------------------APAN 191 (396)
T ss_dssp EEEEC--SSEEEEEEEEEEEETTTTCSEEEEEEECCCCTT------------------------------------SCGG
T ss_pred EEEEe--CCEEEEEEEEEcccCCcccCEEEEEEEeCCCCC------------------------------------CCCC
Confidence 99998 899999999999999999999999999864300 0011
Q ss_pred CCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy9220 261 PQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCF 339 (464)
Q Consensus 261 ~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al 339 (464)
.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++ |+......+...|+.+++.++|++++++
T Consensus 192 ~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al 271 (396)
T 1egd_A 192 KAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGLAQRAL 271 (396)
T ss_dssp GTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999877 8888888899999999999999999999
Q ss_pred HHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9220 340 SMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDML 419 (464)
Q Consensus 340 ~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~ 419 (464)
+.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++
T Consensus 272 ~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~ 351 (396)
T 1egd_A 272 DEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQIL 351 (396)
T ss_dssp HHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998777777899999999999999999999999
Q ss_pred CcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCC
Q psy9220 420 GGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGI 461 (464)
Q Consensus 420 Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~ 461 (464)
||.||+++++++|+|||++...+++|++++++..|++.+++.
T Consensus 352 Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~ 393 (396)
T 1egd_A 352 GGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDK 393 (396)
T ss_dssp GGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred CcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999998864
No 16
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=4.5e-65 Score=522.57 Aligned_cols=369 Identities=32% Similarity=0.475 Sum_probs=349.1
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCc
Q psy9220 26 LLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERVDSG 104 (464)
Q Consensus 26 ~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~~~~ 104 (464)
.+++++.++++.+++|+++.+.|...+.++.+.+| .++|+.+++.||+++.+|+ |||.|+++.+...++|++++.|++
T Consensus 2 ~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~ 80 (372)
T 2dvl_A 2 TLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYP-WPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPS 80 (372)
T ss_dssp -CCHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCC-HHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCC-HHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcH
Confidence 47899999999999999998888877888888999 9999999999999999998 999999999999999999999999
Q ss_pred hhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEE
Q psy9220 105 YRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKY 184 (464)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~ 184 (464)
+++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|+|++
T Consensus 81 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~~t~A~~ 141 (372)
T 2dvl_A 81 VAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGS-------------------DAKSLRAEARR 141 (372)
T ss_dssp HHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSS-------------------CGGGCCCEEEE
T ss_pred HHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCC-------------------ChhhCeeEEEE
Confidence 88777776445667888999999999999999999999999999999999 99999999999
Q ss_pred eCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeE
Q psy9220 185 DPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIR 264 (464)
Q Consensus 185 ~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
+ ++||+|||+|.|||+++.||+++|+|++++ +++
T Consensus 142 ~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~--------------------------------------------g~~ 175 (372)
T 2dvl_A 142 V--KGGFVLNGVKSWITSAGHAHLYVVMARTEK--------------------------------------------GIS 175 (372)
T ss_dssp E--TTEEEEEEEEEEEETTTTCSEEEEEEEETT--------------------------------------------EEE
T ss_pred E--CCEEEEEeEEEeecCCCcCCEEEEEEEeCC--------------------------------------------CcE
Confidence 8 899999999999999999999999999852 478
Q ss_pred EEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy9220 265 GFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFSMAR 343 (464)
Q Consensus 265 ~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 343 (464)
+|+||++.||+++.+.|+++|+++++++++.||||+||++++||.++ |+......+...|+.+++.++|+++++++.++
T Consensus 176 ~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 255 (372)
T 2dvl_A 176 AFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAK 255 (372)
T ss_dssp EEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877 88888888999999999999999999999999
Q ss_pred HHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCccc
Q psy9220 344 SYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLGGNG 423 (464)
Q Consensus 344 ~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g 423 (464)
+|+++|++||+||+++|.+|+++++|..+++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.|
T Consensus 256 ~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g 335 (372)
T 2dvl_A 256 AYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAVEVTREAVQVLGGYG 335 (372)
T ss_dssp HHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred HHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcCee
Confidence 99999999999999999999999999999999999999999999988777778999999999999999999999999999
Q ss_pred ccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 424 ISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 424 ~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
|+++++++|+|||++...+++|++++++..|++.+++
T Consensus 336 ~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 336 YHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp GSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred cCCCCcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999875
No 17
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=5.1e-65 Score=524.56 Aligned_cols=373 Identities=27% Similarity=0.426 Sum_probs=346.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcC
Q psy9220 24 SSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERVD 102 (464)
Q Consensus 24 ~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~~ 102 (464)
+..++++++++++.+++|+++.+.|...+.++.+.+| +++|+.|++.||+++.+|+ |||.|+++.+...++|++++.|
T Consensus 13 ~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 91 (387)
T 3nf4_A 13 RLLPSQEAAELIELTREIADKVLDPIVDRHEKDETYP-EGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARW 91 (387)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCC-TTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCccHHHHhhhCCCC-HHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999988899999999 9999999999999999998 9999999999999999999999
Q ss_pred CchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEE
Q psy9220 103 SGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRA 182 (464)
Q Consensus 103 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A 182 (464)
.++++.+..|. +....+..+|+++||++|+|++++|+.++|+++|||++|| |+..++|+|
T Consensus 92 ~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gs-------------------d~~~~~t~A 151 (387)
T 3nf4_A 92 ASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGS-------------------DAAALRCAA 151 (387)
T ss_dssp HHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSS-------------------CGGGCCCEE
T ss_pred chHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCC-------------------ChhhCEEEE
Confidence 99987777665 5567788999999999999999999999999999999999 999999999
Q ss_pred EEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCC
Q psy9220 183 KYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQ 262 (464)
Q Consensus 183 ~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
+++ +|||+|||+|.|+|+++.||+++|+|+++++ .++
T Consensus 152 ~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~-----------------------------------------~~g 188 (387)
T 3nf4_A 152 TPT--DGGYVINGSKSWITHGGKADFYTLFARTGEG-----------------------------------------SRG 188 (387)
T ss_dssp EEE--TTEEEEEEEEEEEETTTTCSEEEEEEECC-------------------------------------------CCC
T ss_pred EEe--CCEEEEEeEEecccCCcccCEEEEEEEeCCC-----------------------------------------CCc
Confidence 999 8999999999999999999999999998622 236
Q ss_pred eEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy9220 263 IRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFSM 341 (464)
Q Consensus 263 ~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 341 (464)
+++|+||.+.|||++.+.|+++|+++++++++.||||+||++++||..+ |+......+...|+.+++.++|+++++++.
T Consensus 189 ~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 268 (387)
T 3nf4_A 189 VSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDE 268 (387)
T ss_dssp EEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999887 888899999999999999999999999999
Q ss_pred HHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCc
Q psy9220 342 ARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLGG 421 (464)
Q Consensus 342 a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg 421 (464)
+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||
T Consensus 269 a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg 348 (387)
T 3nf4_A 269 AVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTDAVQVFGG 348 (387)
T ss_dssp HHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999887778889999999999999999999999999
Q ss_pred ccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 422 NGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 422 ~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
.||+++++++|+|||++...+++|++++++..|+|.+++
T Consensus 349 ~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 349 VGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp GGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred HhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999998763
No 18
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.5e-64 Score=519.36 Aligned_cols=373 Identities=28% Similarity=0.412 Sum_probs=348.4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcC-
Q psy9220 25 SLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERVD- 102 (464)
Q Consensus 25 ~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~~- 102 (464)
+.+++++.++++.+++|+++.+.|...+.++.+.+| +++|+++++.||+++.+|+ |||.|+++.+...++|++++.|
T Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~ 86 (385)
T 2pg0_A 8 RYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIP-RSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGS 86 (385)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCC-HHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCG
T ss_pred CCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCCC-HHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCC
Confidence 568999999999999999999999888888889999 9999999999999999998 9999999999999999999999
Q ss_pred CchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEE
Q psy9220 103 SGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRA 182 (464)
Q Consensus 103 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A 182 (464)
+++++.+ |..++...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|+|
T Consensus 87 ~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gs-------------------d~~~~~t~A 145 (385)
T 2pg0_A 87 SLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGS-------------------DLANISTTA 145 (385)
T ss_dssp GGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSS-------------------CGGGCCCEE
T ss_pred chHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCc-------------------CHhhCeEEE
Confidence 8876544 5545667788999999999999999999999999999999999 999999999
Q ss_pred EEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCC
Q psy9220 183 KYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQ 262 (464)
Q Consensus 183 ~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
+++ ++||+|||+|.|||+++.||+++|+|+++++. +++.++
T Consensus 146 ~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~-------------------------------------~~~~~g 186 (385)
T 2pg0_A 146 VKD--GDYYIVNGQKTFITNGIHADLIVVACKTDPQA-------------------------------------KPPHRG 186 (385)
T ss_dssp EEE--TTEEEEEEEEEEETTTTTCSEEEEEEESCTTC-------------------------------------SSGGGG
T ss_pred EEc--CCEEEEEeEEecccCCcccCEEEEEEEeCCcc-------------------------------------CCCCCc
Confidence 999 89999999999999999999999999985320 011236
Q ss_pred eEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy9220 263 IRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFSM 341 (464)
Q Consensus 263 ~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 341 (464)
+++|+||++.||+++.+.|+++|+++++++++.||||+||++++||.++ |+......++..|+.+++.++|+++++++.
T Consensus 187 ~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 266 (385)
T 2pg0_A 187 ISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSL 266 (385)
T ss_dssp EEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999877 888888889999999999999999999999
Q ss_pred HHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCc
Q psy9220 342 ARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLGG 421 (464)
Q Consensus 342 a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg 421 (464)
+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++++.+....++++|.++++.+.++++.++|++||
T Consensus 267 a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg 346 (385)
T 2pg0_A 267 TKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGG 346 (385)
T ss_dssp HHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999887777889999999999999999999999999
Q ss_pred ccccCcccHHHHHhhhccceeccChHHHHHHHHHHHh
Q psy9220 422 NGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAI 458 (464)
Q Consensus 422 ~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l 458 (464)
.||+++++++|+|||++...+++|++++++..|++.+
T Consensus 347 ~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 347 YGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp GGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred cccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999974
No 19
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.2e-64 Score=523.35 Aligned_cols=377 Identities=29% Similarity=0.458 Sum_probs=353.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChH--HHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhc
Q psy9220 25 SLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVR--AIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERV 101 (464)
Q Consensus 25 ~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~--e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~ 101 (464)
+.++++++++++.+++|+++.+.|...+.++.+.+| . ++|+.+++.||+++.+|+ |||.|+++.+...++|++++.
T Consensus 11 ~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~ 89 (394)
T 1ivh_A 11 NGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFK-NLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 89 (394)
T ss_dssp GTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCT-THHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCC-chHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhh
Confidence 458999999999999999999999888888888999 7 999999999999999998 999999999999999999999
Q ss_pred CCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeE
Q psy9220 102 DSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTR 181 (464)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~ 181 (464)
|+++++.+.+|..++...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs-------------------d~~~~~t~ 150 (394)
T 1ivh_A 90 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGS-------------------DVVSMKLK 150 (394)
T ss_dssp CHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSS-------------------SGGGCCCE
T ss_pred chhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCc-------------------CcccceEE
Confidence 99988777777656677888999999999999999999999999999999998 88899999
Q ss_pred EEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCC
Q psy9220 182 AKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNP 261 (464)
Q Consensus 182 A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
|+++ ++||+|||+|.|||+++.||+++|+|+++++.+ ++..
T Consensus 151 A~~~--~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~~~-------------------------------------~~~~ 191 (394)
T 1ivh_A 151 AEKK--GNHYILNGNKFWITNGPDADVLIVYAKTDLAAV-------------------------------------PASR 191 (394)
T ss_dssp EEEC--SSEEEEEEEEEEEETGGGCSEEEEEEESCTTCS-------------------------------------SGGG
T ss_pred EEEc--CCEEEEEeEEEeeCCCCcCCEEEEEEEeCCccc-------------------------------------CCCC
Confidence 9998 889999999999999999999999999853300 1123
Q ss_pred CeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy9220 262 QIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFS 340 (464)
Q Consensus 262 ~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 340 (464)
++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||..+ |+......+...|+.+++.++|+++++++
T Consensus 192 g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 271 (394)
T 1ivh_A 192 GITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLD 271 (394)
T ss_dssp GEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999877 88888888999999999999999999999
Q ss_pred HHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy9220 341 MARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLG 420 (464)
Q Consensus 341 ~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~G 420 (464)
.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|++|
T Consensus 272 ~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~G 351 (394)
T 1ivh_A 272 HTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFG 351 (394)
T ss_dssp HHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999987777778999999999999999999999999
Q ss_pred cccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 421 GNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 421 g~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
|.||+++++++|+|||++...+++|++++++..|++.+++
T Consensus 352 g~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~ 391 (394)
T 1ivh_A 352 GNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNA 391 (394)
T ss_dssp GGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHT
T ss_pred CccccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999886
No 20
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3e-64 Score=520.37 Aligned_cols=375 Identities=25% Similarity=0.358 Sum_probs=349.8
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhc
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERV 101 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~ 101 (464)
|+..++++++++++.+++|+++.+.|...+.++.+.+| +++|+++++.||+++.+|+ |||.|+++.+...++|++++.
T Consensus 15 ~~~~~~~e~~~~~~~~r~~~~~~~~~~~~~~d~~~~~p-~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~ 93 (393)
T 1rx0_A 15 PSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFP-VDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATG 93 (393)
T ss_dssp TTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-HHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhcCCCC-HHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHh
Confidence 44568999999999999999999988888888888999 9999999999999999998 999999999999999999999
Q ss_pred CCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeE
Q psy9220 102 DSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTR 181 (464)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~ 181 (464)
|+++++.+..|. +....+..+|+++||++|+|++++|+.++|+++|||++|| |+..+.|+
T Consensus 94 ~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gs-------------------d~~~~~t~ 153 (393)
T 1rx0_A 94 CTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGS-------------------DAASLLTS 153 (393)
T ss_dssp CHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSS-------------------SGGGCCCE
T ss_pred CcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCc-------------------CcccceeE
Confidence 988876666664 5567788899999999999999999999999999999999 88899999
Q ss_pred EEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCC
Q psy9220 182 AKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNP 261 (464)
Q Consensus 182 A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
|+++ ++||+|||+|.|||+++.||+++|+|+++++ +.+
T Consensus 154 A~~~--~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~----------------------------------------~~~ 191 (393)
T 1rx0_A 154 AKKQ--GDHYILNGSKAFISGAGESDIYVVMCRTGGP----------------------------------------GPK 191 (393)
T ss_dssp EEEE--TTEEEEEEEEEEEETTTTCSEEEEEEESSSS----------------------------------------SGG
T ss_pred EEEc--CCEEEEEeEEEeecCCccCCEEEEEEEcCCC----------------------------------------CCC
Confidence 9998 8999999999999999999999999997532 123
Q ss_pred CeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy9220 262 QIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFS 340 (464)
Q Consensus 262 ~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 340 (464)
++++|+||++.|||++.+.++++|+++++++++.||||+||++++||..+ |+......+...|+.+++.++|+++++++
T Consensus 192 g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 271 (393)
T 1rx0_A 192 GISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVI 271 (393)
T ss_dssp GEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999877 88888888899999999999999999999
Q ss_pred HHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9220 341 MARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNL-DTPEMISILKRNNCAKALDIARNARDML 419 (464)
Q Consensus 341 ~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~-~~~~~~~~aK~~~~~~a~~v~~~a~~~~ 419 (464)
.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+. +....++++|.++++.+.++++.++|++
T Consensus 272 ~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~ 351 (393)
T 1rx0_A 272 LTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMH 351 (393)
T ss_dssp HHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999998764 3466789999999999999999999999
Q ss_pred CcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 420 GGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 420 Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
||.||+++++++|+|||++...+++|++++++..|+|.+++
T Consensus 352 Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 352 GGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp GGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred CCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999875
No 21
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.1e-64 Score=523.85 Aligned_cols=379 Identities=29% Similarity=0.458 Sum_probs=353.5
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCC--CHHHHHHHHHHHH
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGA--SHISGGLVAREIE 99 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~--~~~~~~~v~e~l~ 99 (464)
|++.++++++++++.+++|+++.+.|...+.++.+.+|..++|++|++.||+++.+|+ |||.|+ +..+...++|+++
T Consensus 1 M~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela 80 (397)
T 3mpi_A 1 MDFNLSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIA 80 (397)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHH
Confidence 5677999999999999999999999998888888777645899999999999999998 999999 9999999999999
Q ss_pred hcCCchhhHHHhhhhhHHH-HHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCc
Q psy9220 100 RVDSGYRSMYSVQSSLVMG-AIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANM 178 (464)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~-~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~ 178 (464)
+.|.++++.+.+|. ++.. .+..+|+++||++|||++++|+.++|+++|||++|| |+..+
T Consensus 81 ~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gs-------------------d~~~~ 140 (397)
T 3mpi_A 81 RGSSALRVQLNMEV-LGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGS-------------------DVMAM 140 (397)
T ss_dssp HHCHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSS-------------------CGGGC
T ss_pred hhCchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCC-------------------CcccC
Confidence 99999987777763 4445 788999999999999999999999999999999999 88999
Q ss_pred eeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCC
Q psy9220 179 QTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGP 258 (464)
Q Consensus 179 ~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
.|+|+++ +|||+|||+|.|+|+++.||+++|+|+++++ +
T Consensus 141 ~t~A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~---------------------------------------~ 179 (397)
T 3mpi_A 141 SSTAEDK--GDHWLLNGSKTWISNAAQADVLIYYAYTDKA---------------------------------------A 179 (397)
T ss_dssp CCEEEEC--SSEEEEEEEEEEEETTTTCSSEEEEEESCGG---------------------------------------G
T ss_pred eEEEEEe--CCEEEEEEEEEeeCCCcccCEEEEEEEcCCC---------------------------------------C
Confidence 9999998 8999999999999999999999999998643 1
Q ss_pred CCCCeEEEEE-eCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHH
Q psy9220 259 QNPQIRGFII-EKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAE 336 (464)
Q Consensus 259 ~~~~~~~flV-~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~ 336 (464)
+.+++++|+| |++.|||++ +.|+++|+++++++++.||||+||++++||.++ |+......+...|+.+++.++|+++
T Consensus 180 ~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG~a~ 258 (397)
T 3mpi_A 180 GSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQ 258 (397)
T ss_dssp GGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2346899999 999999999 899999999999999999999999999999887 8888889999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHHHHHHHHHHH
Q psy9220 337 FCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESN-LDTPEMISILKRNNCAKALDIARNA 415 (464)
Q Consensus 337 ~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~-~~~~~~~~~aK~~~~~~a~~v~~~a 415 (464)
++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+ .+....++++|.++++.+.++++.+
T Consensus 259 ~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a 338 (397)
T 3mpi_A 259 ACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCANYA 338 (397)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987 6667789999999999999999999
Q ss_pred HHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHH-HHhhCCCCC
Q psy9220 416 RDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILG-RAITGIQAF 464 (464)
Q Consensus 416 ~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~-r~l~~~~~~ 464 (464)
+|++||.||+.+++++|+|||+++..+++|++++++..|+ |.+ |+|.+
T Consensus 339 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l-gl~~~ 387 (397)
T 3mpi_A 339 MRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL-GVRKA 387 (397)
T ss_dssp HHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH-TSSCC
T ss_pred HHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc-CCCcc
Confidence 9999999999999999999999999999999999999999 766 99864
No 22
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.8e-64 Score=525.29 Aligned_cols=380 Identities=21% Similarity=0.280 Sum_probs=342.4
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcC------------------CCChHHHHHHHHHcCCCCCCCCC-CC
Q psy9220 22 NISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHE------------------TSDVRAIYAEFGRLGILGCTLRG-YG 82 (464)
Q Consensus 22 ~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~------------------~~~~~e~~~~l~~~Gl~~l~vP~-~G 82 (464)
.|++.++++++++++.+++|+++.+.|...+.++.. .++ +++|+.+++.||+++.+|+ ||
T Consensus 4 ~M~~~~~~~~~~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~e~G~~~~~~P~~~G 82 (415)
T 4hr3_A 4 SMDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPEL-DSLKAKARAAGLWNLFLPDPEL 82 (415)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHH-HHHHHHHHHTTCSSTTCCCTTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhH-HHHHHHHHhCCCcCcCCCHHHC
Confidence 477889999999999999999999887766655432 256 8999999999999999998 99
Q ss_pred CCCCCHHHHHHHHHHHHhcCCchhhHHH-hhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCC-CCCCccccc
Q psy9220 83 CAGASHISGGLVAREIERVDSGYRSMYS-VQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPN-AGSDVANMQ 160 (464)
Q Consensus 83 G~g~~~~~~~~v~e~l~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~-~gs~~~~~~ 160 (464)
|.|+++.+...++|+|++.|.+..+... .+...++..|..+|+++||++|||++++|+.++|+++|||+ +||
T Consensus 83 G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gs------ 156 (415)
T 4hr3_A 83 GGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASS------ 156 (415)
T ss_dssp SCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTT------
T ss_pred CCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCC------
Confidence 9999999999999999998754432211 11223346788999999999999999999999999999999 899
Q ss_pred ccccCCCCCCCCCCCCCceeEEEEeCCCCeEEEEeEEEeecCCCC--CCEEEEEEEecCCCCCCCCCCccccccccCCCC
Q psy9220 161 TRCFGLTEPNAGSDVANMQTRAKYDPSSNSYIITGSKTWISSAPL--ADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPG 238 (464)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~--Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (464)
|+..++|+|+++ +|||+|||+|.|||++.+ ||+++|+|+++++.
T Consensus 157 -------------d~~~~~t~A~~~--g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~------------------- 202 (415)
T 4hr3_A 157 -------------DATNMAATAVVE--GDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNA------------------- 202 (415)
T ss_dssp -------------SGGGCCCEEEEE--TTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTS-------------------
T ss_pred -------------chhhCeeEEEEE--CCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCC-------------------
Confidence 999999999999 899999999999999966 99999999986441
Q ss_pred CCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccC--eeEEEEceeEeCccCcccccc-ChHH
Q psy9220 239 APLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASV--TGSISLDNVRVSQDQMLLLAN-SYKA 315 (464)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~--~~~v~f~nv~Vp~~~llg~~~-g~~~ 315 (464)
++.+++++|+||++.|||++.+.|+++|+++++ ++++.||||+||++++||..+ |+.+
T Consensus 203 -------------------~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~ 263 (415)
T 4hr3_A 203 -------------------HRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEI 263 (415)
T ss_dssp -------------------CTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHH
T ss_pred -------------------CCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHH
Confidence 223478999999999999999999999999987 999999999999999999877 8888
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCc
Q psy9220 316 PFTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKES--NLDT 393 (464)
Q Consensus 316 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~--~~~~ 393 (464)
....+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++. +.+.
T Consensus 264 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~ 343 (415)
T 4hr3_A 264 AQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGA 343 (415)
T ss_dssp HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 4456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCC
Q psy9220 394 PEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGI 461 (464)
Q Consensus 394 ~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~ 461 (464)
...++++|.++++.+.++++.++|++||.||+++++++|+|||+++..+++|++++++..|++.++|-
T Consensus 344 ~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~ 411 (415)
T 4hr3_A 344 LSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAK 411 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999873
No 23
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.6e-64 Score=514.97 Aligned_cols=361 Identities=23% Similarity=0.336 Sum_probs=330.7
Q ss_pred HHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCchhhHHHhhhh
Q psy9220 36 DSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERVDSGYRSMYSVQSS 114 (464)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~ 114 (464)
+.+++|+++.+.|...+.|+.+.+| +++|++|++.||+++.+|+ |||.|+++.+...++|++++.|+++++.+.+|..
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 80 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELP-RDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGM 80 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCC-HHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCC-HHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHH
Confidence 4578899999999888888889999 9999999999999999998 9999999999999999999999998877777654
Q ss_pred hHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEEeCCCCeEEEE
Q psy9220 115 LVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKYDPSSNSYIIT 194 (464)
Q Consensus 115 ~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~ln 194 (464)
++...+. +|+++||++|||++++|+ +.|+++|||++|| |+..++|+|+++ ++||+||
T Consensus 81 ~~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gs-------------------d~~~~~t~A~~~--~~g~~ln 137 (366)
T 1r2j_A 81 AAWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGS-------------------DLSAMRTRVRLD--GDTAVVD 137 (366)
T ss_dssp HHHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSS-------------------CGGGCCCEEEEE--TTEEEEE
T ss_pred HHHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCC-------------------chhhCEeEEEEe--CCEEEEE
Confidence 5666777 999999999999999999 9999999999999 999999999999 8999999
Q ss_pred eEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCC
Q psy9220 195 GSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPG 274 (464)
Q Consensus 195 G~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~G 274 (464)
|+|.|||+++.||+++|+|+++++ ++++|+||++.||
T Consensus 138 G~K~~~s~~~~Ad~~~v~a~~~~~-------------------------------------------g~~~flV~~~~~G 174 (366)
T 1r2j_A 138 GHKVWTTAAAYADHLVVFGLQEDG-------------------------------------------SGAVVVVPADTPG 174 (366)
T ss_dssp EEEEEETTTTTCSEEEEEEBCSSS-------------------------------------------CCEEEEEETTSTT
T ss_pred EEEecccCCcccCEEEEEEEeCCC-------------------------------------------ceEEEEEECCCCC
Confidence 999999999999999999987421 4789999999999
Q ss_pred eEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy9220 275 YETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAP-FTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQF 352 (464)
Q Consensus 275 v~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~-~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~ 352 (464)
|++.+.|+++|+++++++++.||||+||++++||.++ |+... ...++..|+.+++.++|+++++++.+++|+++|++|
T Consensus 175 v~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~f 254 (366)
T 1r2j_A 175 VRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQF 254 (366)
T ss_dssp EEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEET
T ss_pred eEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccC
Confidence 9999999999999999999999999999999999877 88877 778899999999999999999999999999999999
Q ss_pred CcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHH
Q psy9220 353 NKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESN-LDTPEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVI 431 (464)
Q Consensus 353 g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~-~~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~ 431 (464)
|+||+++|.+|+++++|.++++++|++++++++.++++ .+....++++|.++++.+.++++.++|++||.||+++++++
T Consensus 255 g~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~ 334 (366)
T 1r2j_A 255 GRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVE 334 (366)
T ss_dssp TEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--CCHHH
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHH
Confidence 99999999999999999999999999999999999876 56667899999999999999999999999999999999999
Q ss_pred HHHhhhccceeccChHHHHHHHHHHHhhCCCC
Q psy9220 432 RHMNNLEVVNTYEGTSDIHALILGRAITGIQA 463 (464)
Q Consensus 432 r~~rda~~~~~~~G~~~~~~~~i~r~l~~~~~ 463 (464)
|+|||++...+++|++++++..+++.++|+|.
T Consensus 335 r~~Rda~~~~~~~G~~~~~~~~ia~~~lgl~~ 366 (366)
T 1r2j_A 335 RAYRDAKLMEIIEGSSEMCRVMLAQHALALPA 366 (366)
T ss_dssp HHHHHHHHHHHSSSCHHHHHHHHHHHHTTCC-
T ss_pred HHHHhccCceecCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999874
No 24
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=2.3e-63 Score=538.77 Aligned_cols=374 Identities=28% Similarity=0.446 Sum_probs=344.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcC-CCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHh
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHE-TSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIER 100 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~ 100 (464)
.+..+++|++++++.+++|+++.+.|...+.++.+ .+| .++|+.+.+.||+++.+|+ |||.|+++.+...++|++++
T Consensus 29 ~p~~lt~eq~~l~~~vr~f~~~~~~p~~~~~d~~~~~~~-~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~ 107 (597)
T 3owa_A 29 TPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSR 107 (597)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHTGGGHHHHTTTCHHHH-HHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGG
T ss_pred CccCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCcCC-HHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHc
Confidence 34568999999999999999999998877776655 578 8999999999999999998 99999999999999999999
Q ss_pred cCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCcee
Q psy9220 101 VDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQT 180 (464)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t 180 (464)
.+ +.+..+..|...+...+..+|+++||++|||++++|+.++|+++|||++|| |+..++|
T Consensus 108 ~~-~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGS-------------------D~~~~~T 167 (597)
T 3owa_A 108 AG-GFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGS-------------------DALGAKT 167 (597)
T ss_dssp GT-HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSS-------------------SGGGCCC
T ss_pred cc-hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCC-------------------Cccccee
Confidence 86 344445555555555678899999999999999999999999999999999 9999999
Q ss_pred EEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCC
Q psy9220 181 RAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQN 260 (464)
Q Consensus 181 ~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
+|++++++++|+|||+|.||||++.||+++|+|++++.
T Consensus 168 ~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~~------------------------------------------ 205 (597)
T 3owa_A 168 TARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGE------------------------------------------ 205 (597)
T ss_dssp EEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETTT------------------------------------------
T ss_pred EEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCCC------------------------------------------
Confidence 99998656789999999999999999999999998633
Q ss_pred CCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy9220 261 PQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCF 339 (464)
Q Consensus 261 ~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al 339 (464)
++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||..+ |+.+....++.+|+.+++.++|++++++
T Consensus 206 -g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al 284 (597)
T 3owa_A 206 -HFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAV 284 (597)
T ss_dssp -EEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999887 8999999999999999999999999999
Q ss_pred HHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------CchhHHHHH
Q psy9220 340 SMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNL-------------------DTPEMISIL 400 (464)
Q Consensus 340 ~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~-------------------~~~~~~~~a 400 (464)
+.+++|+++|++||+||+++|.+|++|++|.++++++|+++|++++.+|.+. +....++++
T Consensus 285 ~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~a 364 (597)
T 3owa_A 285 EISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLN 364 (597)
T ss_dssp HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887642 234568999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 401 KRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 401 K~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
|.++++.+.+++++++|++||+||+.+++++|+|||++...+++|++++++..|++.+++
T Consensus 365 K~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~ 424 (597)
T 3owa_A 365 KVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLR 424 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999875
No 25
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-62 Score=528.67 Aligned_cols=379 Identities=27% Similarity=0.433 Sum_probs=344.7
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhc-CCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHH
Q psy9220 17 WEDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRH-ETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLV 94 (464)
Q Consensus 17 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v 94 (464)
|++..+.+ .+++|++++++.+++|+++.+.|...+.+.. ..+| .++|+.+++.||+++.+|+ |||.|++..+...+
T Consensus 19 ~~~~~~~~-~~~~e~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~p-~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v 96 (577)
T 2z1q_A 19 PERVYTPE-DFDESVKEIARTTRTFVEREVLPLLERMEHGELELN-VPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVV 96 (577)
T ss_dssp CSCCCCGG-GCCHHHHHHHHHHHHHHHTTTHHHHHHHHTTCGGGH-HHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHH
T ss_pred HHHcCCCC-CCCHHHHHHHHHHHHHHhccCchhHHhhhcccCCCC-HHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHH
Confidence 44443332 4799999999999999999887764333322 3678 8999999999999999998 99999999999999
Q ss_pred HHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCC
Q psy9220 95 AREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSD 174 (464)
Q Consensus 95 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d 174 (464)
+|++ ..|+++++.+.+|..++..+|..+|+++||++|||++++|+.++|+++|||++|| |
T Consensus 97 ~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGS-------------------D 156 (577)
T 2z1q_A 97 AEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGS-------------------D 156 (577)
T ss_dssp HHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSS-------------------S
T ss_pred HHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCC-------------------C
Confidence 9999 7788888777777655566788999999999999999999999999999999999 9
Q ss_pred CCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccC
Q psy9220 175 VANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDA 254 (464)
Q Consensus 175 ~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (464)
+..+.|+|++++++++|+|||+|.|||+++.||+++|+|++++.
T Consensus 157 ~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g~------------------------------------ 200 (577)
T 2z1q_A 157 ALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDGE------------------------------------ 200 (577)
T ss_dssp GGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETTT------------------------------------
T ss_pred cccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCCC------------------------------------
Confidence 99999999997546789999999999999999999999998522
Q ss_pred CCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHH
Q psy9220 255 THGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLG 333 (464)
Q Consensus 255 ~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G 333 (464)
++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||..+ |+......++.+|+.+++.++|
T Consensus 201 -------gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G 273 (577)
T 2z1q_A 201 -------HFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVG 273 (577)
T ss_dssp -------EEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------eeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999877 9999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCchhHHHH
Q psy9220 334 AAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESN--------------LDTPEMISI 399 (464)
Q Consensus 334 ~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~--------------~~~~~~~~~ 399 (464)
+++++++.+++|+++|+|||+||+++|.+|++|++|.++++++|+++++++..+|.+ .+....+++
T Consensus 274 ~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~ 353 (577)
T 2z1q_A 274 GAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASI 353 (577)
T ss_dssp HHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988764 234467899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhC
Q psy9220 400 LKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 400 aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~ 460 (464)
+|.++++.+.++++.++|++||+||+.+++++|+|||++...+++|++++++..|++.+++
T Consensus 354 aK~~ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~ 414 (577)
T 2z1q_A 354 IKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLR 414 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888764
No 26
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=1.1e-60 Score=518.84 Aligned_cols=385 Identities=26% Similarity=0.392 Sum_probs=344.4
Q ss_pred CcccccccCCCCCHHHHH----HHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHH
Q psy9220 16 NWEDALNISSLLTQEEKL----LRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHIS 90 (464)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~----l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~ 90 (464)
+|.+..+.+..+++++.+ +++.+++|+++.+.| ...+....+| .++|+.+++.||+++.+|+ |||.|++..+
T Consensus 35 ~~~~~~~~p~~l~~~~~~~~~~l~~~~~~~~~~~~~~--~~~d~~~~~p-~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~ 111 (607)
T 2uxw_A 35 TTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDP--AKNDALEMVE-ETTWQGLKELGAFGLQVPSELGGVGLCNTQ 111 (607)
T ss_dssp CCTTTSSCCCCCCHHHHHHHHHHHHHHHHHHHHTCCH--HHHHHHTSCC-HHHHHHHHHTTTTCTTSCGGGTSCCCCHHH
T ss_pred CHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHhhcCH--HHhccccCCC-HHHHHHHHHcCCcCCCCChhhCCCCCCHHH
Confidence 344444444567877754 889999999998755 3456678899 9999999999999999998 9999999999
Q ss_pred HHHHHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCC
Q psy9220 91 GGLVAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPN 170 (464)
Q Consensus 91 ~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~ 170 (464)
...++|+++++|+++++.+.+|..++...|..+|+++||++|||++++|+.++|+++|||++||
T Consensus 112 ~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGS---------------- 175 (607)
T 2uxw_A 112 YARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGS---------------- 175 (607)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSS----------------
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCC----------------
Confidence 9999999999999988777766555467788999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhh
Q psy9220 171 AGSDVANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAK 250 (464)
Q Consensus 171 ~~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (464)
|+..++|+|++++++++|+|||+|.|||+++.||+++|+|++++...
T Consensus 176 ---D~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~------------------------------ 222 (607)
T 2uxw_A 176 ---DAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDP------------------------------ 222 (607)
T ss_dssp ---CGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECT------------------------------
T ss_pred ---CcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCc------------------------------
Confidence 99999999999754558999999999999999999999999853200
Q ss_pred cccCCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHH
Q psy9220 251 CEDATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAW 329 (464)
Q Consensus 251 ~~~~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa 329 (464)
+ .|++.+++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||.++ |+......++.+|+.+++
T Consensus 223 --~--~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa 298 (607)
T 2uxw_A 223 --A--TGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA 298 (607)
T ss_dssp --T--TCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHH
T ss_pred --c--cCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 0 01112478999999999999999999999999999999999999999999999887 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHH
Q psy9220 330 GVLGAAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNL-DTPEMISILKRNNCAKA 408 (464)
Q Consensus 330 ~~~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~-~~~~~~~~aK~~~~~~a 408 (464)
.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +....++++|.++++.+
T Consensus 299 ~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a 378 (607)
T 2uxw_A 299 ALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAA 378 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998763 44578999999999999
Q ss_pred HHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHH
Q psy9220 409 LDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGR 456 (464)
Q Consensus 409 ~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r 456 (464)
.+++++++|++||+||.++++++|+|||++...+++|++++++..|++
T Consensus 379 ~~v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~ 426 (607)
T 2uxw_A 379 WKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVAL 426 (607)
T ss_dssp HHHHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988853
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=1.3e-60 Score=499.52 Aligned_cols=388 Identities=16% Similarity=0.194 Sum_probs=342.1
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhc----C-CC--ChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHH
Q psy9220 22 NISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRH----E-TS--DVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGL 93 (464)
Q Consensus 22 ~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~----~-~~--~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~ 93 (464)
.|++.+++|++++++.+++|+++++.|...+.+.. + .+ + +++|++|++.||+++.+|+ |||.|+++.+...
T Consensus 2 ~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~ 80 (438)
T 3mkh_A 2 AIDFHLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSPLRFQST-QPTYAAAVSAGILKGQISPAHGGTGGTLIESAI 80 (438)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTT-HHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCc-HHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHH
Confidence 37788999999999999999999998876555432 1 23 4 7899999999999999998 9999999999999
Q ss_pred HHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcC--CceEEEeecCCCCCCCcccccccccCCCCCCC
Q psy9220 94 VAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKG--NLIGCFGLTEPNAGSDVANMQTRCFGLTEPNA 171 (464)
Q Consensus 94 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G--~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~ 171 (464)
++|+|++.|+++++.+..+ .++...+..+|+++ |++||+++++| +.++|+++|||++|||+ .
T Consensus 81 v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~--------------~ 144 (438)
T 3mkh_A 81 LVEECYSVEPSAALTIFAT-GLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANA--------------L 144 (438)
T ss_dssp HHHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTT--------------T
T ss_pred HHHHHHhhChhHHHHHHHh-hHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCc--------------c
Confidence 9999999999887655444 34556677899999 99999999996 58999999999988721 0
Q ss_pred CCCCCCceeEEEEeCCCCeEEEEeEEEeecCCC-----CCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhh
Q psy9220 172 GSDVANMQTRAKYDPSSNSYIITGSKTWISSAP-----LADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCI 246 (464)
Q Consensus 172 ~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~-----~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (464)
.||+..++|+|+++ ++||+|||+|.|||+++ .||+++|+|+++.....
T Consensus 145 ~sd~~~~~t~A~~~--g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~------------------------- 197 (438)
T 3mkh_A 145 EKGAPGFQTTARLE--GDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLE------------------------- 197 (438)
T ss_dssp CTTSCCCSCEEEEE--TTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCC-------------------------
T ss_pred ccccccceeEEEEe--CCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccC-------------------------
Confidence 12588899999999 89999999999999997 89999999998642000
Q ss_pred hhhhcccCCCCCCCCCeEEEEEeCCC-----CC-eEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHh
Q psy9220 247 LWAKCEDATHGPQNPQIRGFIIEKDT-----PG-YETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTL 319 (464)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~flV~~~~-----~G-v~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~ 319 (464)
+.++...++++|+||++. || +++.+.|+++|+++++++++.||||+||++++||..+ |+.+....
T Consensus 198 --------~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~ 269 (438)
T 3mkh_A 198 --------EGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGA 269 (438)
T ss_dssp --------TTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHH
T ss_pred --------cccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchHHHHHHH
Confidence 001123468999999875 88 9999999999999999999999999999999999887 88889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC-cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc----h
Q psy9220 320 LNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFN-KPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDT----P 394 (464)
Q Consensus 320 l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g-~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~----~ 394 (464)
+..+|+.+++.++|+++++++.+++|+++|++|| +||+++|.+|++|++|.++++++|++++++++.++.+... .
T Consensus 270 l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~ 349 (438)
T 3mkh_A 270 FDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGPGDYDARR 349 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHH
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999999887542 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChH-HHHHHHHHHHhhCC
Q psy9220 395 EMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTS-DIHALILGRAITGI 461 (464)
Q Consensus 395 ~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~-~~~~~~i~r~l~~~ 461 (464)
..++++|.++++.+.++++.++|++||+||.++++++|+|||+++..+++|++ ++++.+|+|.+++.
T Consensus 350 ~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 350 ELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 34679999999999999999999999999999999999999999999999999 99999999999986
No 28
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-61 Score=502.82 Aligned_cols=383 Identities=21% Similarity=0.277 Sum_probs=331.8
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHHHhhcCCchh---hhhhc-----CC-----CChHHHHHHHHHcCCCCCCCCCCCCC
Q psy9220 18 EDALNISSLLTQEEKLLRDSVKSFCDAVLHPKIV---EDFRH-----ET-----SDVRAIYAEFGRLGILGCTLRGYGCA 84 (464)
Q Consensus 18 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~---~~~~~-----~~-----~~~~e~~~~l~~~Gl~~l~vP~~GG~ 84 (464)
.+...|++.++++++++++.+++|+++++.|... +.++. .. ++ +++|+++++.||+++.+|+ |.
T Consensus 14 ~~~~~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~l~~P~--G~ 90 (428)
T 2wbi_A 14 IDTTGQLFVQTRKGQEVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVI-DKLKEMAKVEGLWNLFLPA--VS 90 (428)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHH-HHHHHHHHHTTCCSTTCHH--HH
T ss_pred CCCccCCCCCCHHHHHHHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccH-HHHHHHHHHCCCCeecCCC--CC
Confidence 3445578889999999999999999998866554 43322 12 34 7899999999999999999 88
Q ss_pred CCCHHHHHHHHHHHHhcCCch-hhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCC-CCCCccccccc
Q psy9220 85 GASHISGGLVAREIERVDSGY-RSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPN-AGSDVANMQTR 162 (464)
Q Consensus 85 g~~~~~~~~v~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~-~gs~~~~~~~~ 162 (464)
|+++.+...++|++++.+.+. .+.+..+...+...|..+|+++||++|||++++|+.++|+++|||+ +||
T Consensus 91 g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGs-------- 162 (428)
T 2wbi_A 91 GLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASS-------- 162 (428)
T ss_dssp CCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTT--------
T ss_pred CCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCC--------
Confidence 999999999999999987432 2111112224556788899999999999999999999999999999 898
Q ss_pred ccCCCCCCCCCCCCCceeEEEEeCCCCeEEEEeEEEeecCCCC--CCEEEEEEEecCCCCCCCCCCccccccccCCCCCC
Q psy9220 163 CFGLTEPNAGSDVANMQTRAKYDPSSNSYIITGSKTWISSAPL--ADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAP 240 (464)
Q Consensus 163 ~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~--Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (464)
|+..+.|+|+++ +|||+|||+|.|||++.. ||+++|+|+++++.
T Consensus 163 -----------d~~~~~t~A~~~--~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~--------------------- 208 (428)
T 2wbi_A 163 -----------DATNIECSIQRD--EDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTS--------------------- 208 (428)
T ss_dssp -----------SGGGCCCEEEEE--TTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTT---------------------
T ss_pred -----------CcccceEEEEEe--CCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCcc---------------------
Confidence 988999999998 899999999999999987 99999999985330
Q ss_pred chhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccC---eeEEEEceeEeCccCcccccc-ChHHH
Q psy9220 241 LADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASV---TGSISLDNVRVSQDQMLLLAN-SYKAP 316 (464)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~---~~~v~f~nv~Vp~~~llg~~~-g~~~~ 316 (464)
+++..++++|+||++.|||++.+.|+++|+++++ ++++.||||+||++++||..+ |+...
T Consensus 209 ----------------~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~ 272 (428)
T 2wbi_A 209 ----------------LSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEIS 272 (428)
T ss_dssp ----------------SCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHH
T ss_pred ----------------CCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHH
Confidence 0122368999999999999999999999999995 999999999999999999877 88888
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-CCch
Q psy9220 317 FTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKES-N-LDTP 394 (464)
Q Consensus 317 ~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~-~-~~~~ 394 (464)
...+..+|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++. + .+..
T Consensus 273 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~ 352 (428)
T 2wbi_A 273 QGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAK 352 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchH
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999886 2 3455
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHHHhhCC
Q psy9220 395 EMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGRAITGI 461 (464)
Q Consensus 395 ~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r~l~~~ 461 (464)
..++++|.++++.+.++++.++|++||+||.++++++|+|||++...+++|++++++..|++.+++.
T Consensus 353 ~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~ 419 (428)
T 2wbi_A 353 KEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRD 419 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999999998864
No 29
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.4e-59 Score=492.05 Aligned_cols=388 Identities=16% Similarity=0.188 Sum_probs=341.0
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhc----CCC--ChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHH
Q psy9220 23 ISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRH----ETS--DVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVA 95 (464)
Q Consensus 23 ~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~----~~~--~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~ 95 (464)
|++.+++++..+++.+++|+++++.|...+.++. +.+ + +++|+++++.||+++.+|+ |||.|+++.+...++
T Consensus 2 M~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ 80 (439)
T 2c12_A 2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQAT-RPFYREAVRHGLIKAQVPIPLGGTMESLVHESIIL 80 (439)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTT-HHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCCCh-HHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHH
Confidence 6677899999999999999999998876665543 222 4 7899999999999999998 999999999999999
Q ss_pred HHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHh--cCCceEEEeecCCCCCCCcccccccccCCCCCCCCC
Q psy9220 96 REIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELA--KGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGS 173 (464)
Q Consensus 96 e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~--~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~ 173 (464)
|++++.|+++++.+..|. +....+..+|+++||++|||+++ +|+.++|+++|||++||| ...|
T Consensus 81 eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~--------------~~~s 145 (439)
T 2c12_A 81 EELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTAN--------------WLQK 145 (439)
T ss_dssp HHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTT--------------TTCT
T ss_pred HHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCC--------------cccc
Confidence 999999999987666653 44567888999999999999999 699999999999998872 1112
Q ss_pred CCCCceeEEEEeCCCCeEEEEeEEEeecCCC-----CCCEEEEEEEe-cC---CCCCCCCCCccccccccCCCCCCchhh
Q psy9220 174 DVANMQTRAKYDPSSNSYIITGSKTWISSAP-----LADLCILWAKC-ED---PTHGPQNPQIRGFIIEKDTPGAPLADL 244 (464)
Q Consensus 174 d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~-----~Ad~~~v~A~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (464)
|+..++|+|+++ ++||+|||+|.|||+++ .||+++|+|++ +. +..
T Consensus 146 d~~~~~t~A~~~--~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~------------------------ 199 (439)
T 2c12_A 146 GGPGLQTTARKV--GNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQD------------------------ 199 (439)
T ss_dssp TSCCCSCEEEEE--TTEEEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCC------------------------
T ss_pred ccccceeEEEEc--CCEEEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccc------------------------
Confidence 577889999999 89999999999999997 99999999998 52 100
Q ss_pred hhhhhhcccCCCCCCCCCeEEEEEeCCCC------CeEEeccCCccCCcccCeeEEEEceeEeCccCcccccc-ChH-HH
Q psy9220 245 CILWAKCEDATHGPQNPQIRGFIIEKDTP------GYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYK-AP 316 (464)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~flV~~~~~------Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~-~~ 316 (464)
.+.++.+++++|+||.+.| |+++.+.|+++|+++++++++.||||+||++++||..+ |+. +.
T Consensus 200 ----------~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~ 269 (439)
T 2c12_A 200 ----------PNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLV 269 (439)
T ss_dssp ----------TTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHHH
T ss_pred ----------cccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCCccHHHHH
Confidence 0001123689999999988 88899999999999999999999999999999999877 888 88
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--
Q psy9220 317 FTLLNSARYGIAWGVLGAAEFCFSMARSYMLD-RVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDT-- 393 (464)
Q Consensus 317 ~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~-R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~-- 393 (464)
...+...|+.+++.++|+++++++.+++|+++ |++||+||+++|.+|++|++|.++++++|++++++++.++.+.+.
T Consensus 270 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~ 349 (439)
T 2c12_A 270 ETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWK 349 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccch
Confidence 88899999999999999999999999999996 788999999999999999999999999999999999999876542
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChH-HHHHHHHHHHhhCCCC
Q psy9220 394 --PEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTS-DIHALILGRAITGIQA 463 (464)
Q Consensus 394 --~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~-~~~~~~i~r~l~~~~~ 463 (464)
...++++|.++++.+.++++.++|++||.||+++++++|+|||++...+++|++ ++++..+++.+ ..|.
T Consensus 350 ~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l-~~~~ 421 (439)
T 2c12_A 350 VKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVM-ALED 421 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHH-TSTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHH-hccc
Confidence 335889999999999999999999999999999999999999999999999988 79999998755 4554
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=4.4e-59 Score=480.86 Aligned_cols=369 Identities=15% Similarity=0.162 Sum_probs=326.0
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCC-CCHHHHHHHHHHHH
Q psy9220 22 NISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAG-ASHISGGLVAREIE 99 (464)
Q Consensus 22 ~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g-~~~~~~~~v~e~l~ 99 (464)
++...++++++++++.+++|+++ +.|...+.|+.+.+| +++|+.+++.||+++.+|+ |||.| .++.+...++|+++
T Consensus 4 ~~~~~lt~e~~~~~~~~r~~~~~-~~~~a~~~d~~~~~p-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~ 81 (395)
T 3mxl_A 4 DLRAPLTPAGRTVVDLLAGVIPR-ISAEAADRDRTGTFP-VEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLA 81 (395)
T ss_dssp SSSSCCSHHHHHHHHHHTTTHHH-HHHHHHHHHHHTCCC-HHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHH-HhhchHHHhhhCCCC-HHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHH
Confidence 35567899999999999999985 788888899999999 9999999999999999998 99999 89999999999999
Q ss_pred hcCCchhhHHHhhhhhHHHHH--HhcCCHHHH---HHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCC
Q psy9220 100 RVDSGYRSMYSVQSSLVMGAI--DKYGSDKQK---AKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSD 174 (464)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~l--~~~g~~~q~---~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d 174 (464)
+.|.++++.+.+|...+...+ ..+|+++|| ++|||++++|+.++|+++|||++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~-------------------- 141 (395)
T 3mxl_A 82 EADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV-------------------- 141 (395)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--------------------
T ss_pred hhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--------------------
Confidence 999998877777754444333 356999999 9999999999999999999998654
Q ss_pred CCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccC
Q psy9220 175 VANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDA 254 (464)
Q Consensus 175 ~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (464)
..++|+ + +|||+|||+|.|||+++.||+++|+|+++++
T Consensus 142 -~~~~t~---~--~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~------------------------------------ 179 (395)
T 3mxl_A 142 -TELHSD---G--AGGWLLSGRKVLVSMAPIATHFFVHAQRRDD------------------------------------ 179 (395)
T ss_dssp -CEEEEC---S--SSCEEEEEEEEEETTGGGCSEECCCEEEECT------------------------------------
T ss_pred -CceEEe---c--CCEEEEeeEEEEecCccccCEEEEEEEeCCC------------------------------------
Confidence 223322 3 8899999999999999999999999998644
Q ss_pred CCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccc--ccc-ChHHHHHhhhHHHHHHHHHH
Q psy9220 255 THGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLL--LAN-SYKAPFTLLNSARYGIAWGV 331 (464)
Q Consensus 255 ~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg--~~~-g~~~~~~~l~~~r~~~aa~~ 331 (464)
++.+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++|| ..+ ++..........|+.+++.+
T Consensus 180 ---~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~ 256 (395)
T 3mxl_A 180 ---DGSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIY 256 (395)
T ss_dssp ---TSCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHH
T ss_pred ---CCCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHH
Confidence 123468899999999999999999999999999999999999999999998 444 66555555666899999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CC-C-----chhHHHH
Q psy9220 332 LGAAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKES------NL-D-----TPEMISI 399 (464)
Q Consensus 332 ~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~------~~-~-----~~~~~~~ 399 (464)
+|+++++++.+++|++ ++||+++|.+|++|++|.++++++|++++++++.++. .. . ....+++
T Consensus 257 ~G~a~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ 331 (395)
T 3mxl_A 257 AGIAQAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQY 331 (395)
T ss_dssp HHHHHHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHH
Confidence 9999999999999998 4689999999999999999999999999999998875 11 1 1245778
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccce-eccChHHHHHHHHHHHhhCCC
Q psy9220 400 LKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVN-TYEGTSDIHALILGRAITGIQ 462 (464)
Q Consensus 400 aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~-~~~G~~~~~~~~i~r~l~~~~ 462 (464)
+|.++++.+.++++.++|++||.||+++++++|+|||++... +++|++++++.+|+|.++|+|
T Consensus 332 ak~~~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lglp 395 (395)
T 3mxl_A 332 AKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALGLD 395 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999 999999999999999999996
No 31
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=3e-57 Score=474.24 Aligned_cols=373 Identities=15% Similarity=0.220 Sum_probs=324.7
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCC-CCHHHHHHHHH
Q psy9220 19 DALNISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAG-ASHISGGLVAR 96 (464)
Q Consensus 19 ~~~~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g-~~~~~~~~v~e 96 (464)
+...|++.++++++++++.+++|+++ +.|...+.++.+.+| .++|+.|++.||+++.+|+ |||.| .++.++..++|
T Consensus 12 ~~~~m~~~lt~e~~~l~~~~r~~~~~-~~~~a~~~d~~~~~~-~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~e 89 (439)
T 3m9v_A 12 STTGLYAPVTPAGRVLLDRLAAHLPR-IRSTAAEHDRDGTFP-TDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALL 89 (439)
T ss_dssp CCSTTSSCSSHHHHHHHHHHHTTHHH-HHHHHHHHHHHTCCC-HHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHH-HhhhHHHHHhcCCCC-HHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHH
Confidence 44568889999999999999999985 778888888899999 9999999999999999998 99999 89999999999
Q ss_pred HHHhcCCchhhHHHhhhhhHHHH--HHhcCCHHH---HHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCC
Q psy9220 97 EIERVDSGYRSMYSVQSSLVMGA--IDKYGSDKQ---KAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNA 171 (464)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~q---~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~ 171 (464)
++++.|.++++.+.+|....... +..+|+++| |++||+++++|+.+.|+++|||+++
T Consensus 90 el~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~------------------ 151 (439)
T 3m9v_A 90 AVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA------------------ 151 (439)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC------------------
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC------------------
Confidence 99999998887777765444333 346799999 9999999999999999999999843
Q ss_pred CCCCCCceeEEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhc
Q psy9220 172 GSDVANMQTRAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKC 251 (464)
Q Consensus 172 ~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (464)
...+.|+ + +|||+|||+|+|+|++++||+++|+|+++++
T Consensus 152 ---~~~~~t~---~--~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~--------------------------------- 190 (439)
T 3m9v_A 152 ---VTTLRPD---G--AGGWLLSGRKTLVSMAPVGTHFVINARTDGT--------------------------------- 190 (439)
T ss_dssp ---CCEEEEC---S--SSCEEEEEEEEEETTGGGCSEEEECEEECC----------------------------------
T ss_pred ---CCceeec---c--CCEEEEEeEEEeecCccccCEEEEEEEecCC---------------------------------
Confidence 3333332 4 8899999999999999999999999999644
Q ss_pred ccCCCCCCCCCeEEEEEeCCCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccc--ccc-ChHHHHHhhhHHHHHHH
Q psy9220 252 EDATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLL--LAN-SYKAPFTLLNSARYGIA 328 (464)
Q Consensus 252 ~~~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg--~~~-g~~~~~~~l~~~r~~~a 328 (464)
.+.+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++|| ..+ ++.........+|+.++
T Consensus 191 ------~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~a 264 (439)
T 3m9v_A 191 ------DGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVL 264 (439)
T ss_dssp -------CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGH
T ss_pred ------CCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHH
Confidence 123468999999999999999999999999999999999999999999998 444 55444444556899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CCchhH
Q psy9220 329 WGVLGAAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESN------------LDTPEM 396 (464)
Q Consensus 329 a~~~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~------------~~~~~~ 396 (464)
+.++|+++++++.+++|++. +|++++|.+|++|++|.++++++|+++++++..++.. ......
T Consensus 265 a~~~G~a~~al~~a~~~a~~-----r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~ 339 (439)
T 3m9v_A 265 GVYVGVAQAAYDTAVAALER-----RPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRH 339 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----CSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHH
Confidence 99999999999999999984 6899999999999999999999999999998877641 112345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccce-eccChHHHHHHHHHHHhhCCCC
Q psy9220 397 ISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVN-TYEGTSDIHALILGRAITGIQA 463 (464)
Q Consensus 397 ~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~-~~~G~~~~~~~~i~r~l~~~~~ 463 (464)
++++|.++++.+.++++.++|++||.||+++++++|+|||+++.. +++|++++.+..+++.++|++.
T Consensus 340 ~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~~~ 407 (439)
T 3m9v_A 340 FQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGIER 407 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCCch
Confidence 678999999999999999999999999999999999999999999 9999999999999999999875
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=9.3e-57 Score=467.11 Aligned_cols=367 Identities=12% Similarity=0.056 Sum_probs=319.3
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHh
Q psy9220 22 NISSLLTQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIER 100 (464)
Q Consensus 22 ~~~~~l~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~ 100 (464)
..++.+++++.++++.+++|+++ +.|...+.++.+.+| .++|++|++.||+++.+|+ |||.|+++.+...++|++++
T Consensus 13 ~~~~~~~~~~~~l~~~~r~~~~~-~~~~a~~~d~~~~~p-~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~ 90 (414)
T 2or0_A 13 GRENLYFQGMGRVLDRIEVVAEE-IRGQAVQSEADCRLT-DAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAA 90 (414)
T ss_dssp ----------CHHHHHHHHTHHH-HHHHHHHHHHHTSCC-HHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred cccCCCCccHHHHHHHHHHHHHH-HHHhHHHHHhcCCCC-HHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHh
Confidence 34567899999999999999986 777777888888999 9999999999999999998 99999999999999999999
Q ss_pred cCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCcee
Q psy9220 101 VDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQT 180 (464)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t 180 (464)
.|+++++.+.++. +....+..+|+++||++|++ +|+.++|+++| | .|
T Consensus 91 ~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p----------------------------~t 137 (414)
T 2or0_A 91 LDGASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P----------------------------MG 137 (414)
T ss_dssp HCHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C----------------------------CE
T ss_pred hChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C----------------------------Cc
Confidence 9999887666653 56677889999999999999 79988888765 3 46
Q ss_pred EEEEeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCC
Q psy9220 181 RAKYDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQN 260 (464)
Q Consensus 181 ~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
+|+++ ++||+|||+|.|||+++.||+++|+|+++++.. .+..
T Consensus 138 ~A~~~--~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g------------------------------------~~~~ 179 (414)
T 2or0_A 138 VATPV--DGGYVLKGRWSFSSGTDHCQWAFLGAMVGDGEG------------------------------------GIAT 179 (414)
T ss_dssp EEEEE--TTEEEEEEEEEEETTGGGCSEEEEEEEECC-----------------------------------------CC
T ss_pred eeEEE--CCeEEEEeeEeccCCCchhhEEEEEEEecCCCC------------------------------------Cccc
Confidence 78888 899999999999999999999999999863200 0001
Q ss_pred CCeEEEEEeCCCCCeEEe-ccCCccCCcccCeeEEEEceeEeCccCcccc--------c-----cChHHHHHhhhHHHHH
Q psy9220 261 PQIRGFIIEKDTPGYETS-VIKGKFGLRASVTGSISLDNVRVSQDQMLLL--------A-----NSYKAPFTLLNSARYG 326 (464)
Q Consensus 261 ~~~~~flV~~~~~Gv~i~-~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~--------~-----~g~~~~~~~l~~~r~~ 326 (464)
+++++|+||++ |+++. +.|+++|+++++++++.||||+||++++|+. + .|+.+....+...|+.
T Consensus 180 ~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~ 257 (414)
T 2or0_A 180 PSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYSCMFPLG 257 (414)
T ss_dssp CSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHHHHHHHH
T ss_pred ceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCccccccHHHHHHHH
Confidence 26899999997 89999 8999999999999999999999999999975 1 1345556667889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccc-CcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCc----hhHH
Q psy9220 327 IAWGVLGAAEFCFSMARSYMLDRVQF-NKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKE----SNLDT----PEMI 397 (464)
Q Consensus 327 ~aa~~~G~a~~al~~a~~~~~~R~~~-g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d----~~~~~----~~~~ 397 (464)
+++.++|+++++++.+++|+++|++| |+||+++|.+|++|++|.++++++|++++++++.++ .+.+. ...+
T Consensus 258 ~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~~~~~~~~~ 337 (414)
T 2or0_A 258 ITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEITFEERAIG 337 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999999999999999 999999999999999999999999999999999998 55432 2468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccC-hHHHHHHHHHHHhhCCCC
Q psy9220 398 SILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEG-TSDIHALILGRAITGIQA 463 (464)
Q Consensus 398 ~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G-~~~~~~~~i~r~l~~~~~ 463 (464)
+++|.++++.+.++++.++|++||.||+++++++|+|||++...+++| ++++++..+++.++|+++
T Consensus 338 ~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~~~ 404 (414)
T 2or0_A 338 RRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGGEP 404 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999999 999999999999999885
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=1.4e-55 Score=454.79 Aligned_cols=353 Identities=11% Similarity=0.097 Sum_probs=316.5
Q ss_pred HHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCchhhHHHh
Q psy9220 33 LLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERVDSGYRSMYSV 111 (464)
Q Consensus 33 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~ 111 (464)
++++.+++|+++ +.|...+.|+.+.+| +++|++|++.||+++.+|+ |||.|+++.+...++|+|++.|+++++.+.+
T Consensus 11 ~l~~~~~~~~~~-~~~~~~~~d~~~~~p-~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~ 88 (394)
T 2rfq_A 11 EVMQRLDALLPT-LRERAQETEDLRRIP-DDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSI 88 (394)
T ss_dssp HHHHHHHHHHHH-HHHTHHHHHHHTSCC-HHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHhHHHHHhcCCCC-HHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHH
Confidence 588999999985 777777788888999 9999999999999999998 9999999999999999999999998876666
Q ss_pred hhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEEeCCCCeE
Q psy9220 112 QSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKYDPSSNSY 191 (464)
Q Consensus 112 ~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~ 191 (464)
+. +....+..+|+++||++|++ +|+.+.|+++| | .|+|+++ ++||
T Consensus 89 ~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p----------------------------~t~A~~~--~~g~ 133 (394)
T 2rfq_A 89 IG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P----------------------------MGAGQVV--DGGY 133 (394)
T ss_dssp HH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C----------------------------SEEEEEE--TTEE
T ss_pred HH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C----------------------------CceEEEe--CCeE
Confidence 53 55667888999999999999 79988888765 2 3578888 8999
Q ss_pred EEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCC
Q psy9220 192 IITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKD 271 (464)
Q Consensus 192 ~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~ 271 (464)
+|||+|.|||+++.||+++|+|+++++. ..+++++|+||++
T Consensus 134 ~lnG~K~~is~a~~Ad~~~v~a~~~~~g---------------------------------------~~~~~~~flV~~~ 174 (394)
T 2rfq_A 134 TVNGAWAWSSGCDHASWAVLGGPVIKDG---------------------------------------RPVDFVSFLIPRE 174 (394)
T ss_dssp EEEEEEEEETTGGGCSEEEEEEEEEETT---------------------------------------EEEEEEEEEEEGG
T ss_pred EEeeeEeccCCCcccceEEEeeeecCCC---------------------------------------CCCceeEEEEEhh
Confidence 9999999999999999999999984220 0125789999997
Q ss_pred CCCeEEeccCCccCCcccCeeEEEEceeEeCccCcccc--------cc-----ChHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy9220 272 TPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLL--------AN-----SYKAPFTLLNSARYGIAWGVLGAAEFC 338 (464)
Q Consensus 272 ~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~--------~~-----g~~~~~~~l~~~r~~~aa~~~G~a~~a 338 (464)
|+++.+.|+++|+++++++++.||||+||++++|+. ++ ++.+....+...|+.+++.++|+++++
T Consensus 175 --gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~~G~a~~a 252 (394)
T 2rfq_A 175 --DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTISAPIVGMAYGA 252 (394)
T ss_dssp --GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999975 11 344555667889999999999999999
Q ss_pred HHHHHHHhhhhc---ccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCc----hhHHHHHHHHHHHH
Q psy9220 339 FSMARSYMLDRV---QFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKE----SNLDT----PEMISILKRNNCAK 407 (464)
Q Consensus 339 l~~a~~~~~~R~---~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d----~~~~~----~~~~~~aK~~~~~~ 407 (464)
++.+++|+++|+ +||+||+++|.+|++|++|.++++++|++++++++.++ .+.+. ...++++|.++++.
T Consensus 253 l~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~~~ 332 (394)
T 2rfq_A 253 YDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFELRLRARRDQVRATGR 332 (394)
T ss_dssp HHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999998 55432 24689999999999
Q ss_pred HHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccC-hHHHHHHHHHHHhhCCCC
Q psy9220 408 ALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEG-TSDIHALILGRAITGIQA 463 (464)
Q Consensus 408 a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G-~~~~~~~~i~r~l~~~~~ 463 (464)
+.++++.++|++||.||+++++++|+|||++...+++| ++++++..+++.++|+|+
T Consensus 333 a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~~~ 389 (394)
T 2rfq_A 333 AISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGLPI 389 (394)
T ss_dssp HHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999 999999999999999986
No 34
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=1.3e-55 Score=459.70 Aligned_cols=355 Identities=13% Similarity=0.077 Sum_probs=319.5
Q ss_pred HHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCchhhHHH
Q psy9220 32 KLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASHISGGLVAREIERVDSGYRSMYS 110 (464)
Q Consensus 32 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~ 110 (464)
.++++.+++|++ .+.|...+.++.+.+| +++|+.|++.||+++.+|+ |||.|+++.+...++|++++.|+++++.+.
T Consensus 38 ~~l~~~~r~~~~-~~~~~a~~~d~~~~~p-~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~ 115 (422)
T 2jbr_A 38 VSMLEKIQQILP-QIAKNAESAEQLRRVP-DENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFS 115 (422)
T ss_dssp CCHHHHHHHHHH-HHHHTHHHHHHHTSCC-HHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHhhHHHHHcCCCC-HHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHH
Confidence 358899999998 4777777888888999 9999999999999999998 999999999999999999999999886666
Q ss_pred hhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEEeCCCCe
Q psy9220 111 VQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKYDPSSNS 190 (464)
Q Consensus 111 ~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g 190 (464)
.+ .+....+..+|+++||++|+++ |+.+.|+++| | .|+|+++ ++|
T Consensus 116 ~~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p----------------------------~t~A~~~--~~g 160 (422)
T 2jbr_A 116 LL-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P----------------------------FGKVEEV--EGG 160 (422)
T ss_dssp HH-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C----------------------------CSEEEEE--TTE
T ss_pred HH-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C----------------------------CeeEEEe--CCE
Confidence 55 3556678889999999999996 8888888765 3 3578888 899
Q ss_pred EEEEeEEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeC
Q psy9220 191 YIITGSKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEK 270 (464)
Q Consensus 191 ~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~ 270 (464)
|+|||+|.|||+++.||+++|+|+++++ ++.+++++|+||+
T Consensus 161 ~~lnG~K~~is~a~~Ad~~~v~a~~~~~---------------------------------------~g~~g~~~flV~~ 201 (422)
T 2jbr_A 161 IILNGDYGWSSGCDHAEYAIVGFNRFDA---------------------------------------DGNKIYSFGVIPR 201 (422)
T ss_dssp EEEEEEEEEETTGGGCSEEEEEEEEECT---------------------------------------TSCEEEEEEEEEG
T ss_pred EEEeeeEeeecCCccccEEEEEEEecCC---------------------------------------CCCceeEEEEEEc
Confidence 9999999999999999999999998643 1223689999999
Q ss_pred CCCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccc--------c-C-----hHHHHHhhhHHHHHHHHHHHHHHH
Q psy9220 271 DTPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLA--------N-S-----YKAPFTLLNSARYGIAWGVLGAAE 336 (464)
Q Consensus 271 ~~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~--------~-g-----~~~~~~~l~~~r~~~aa~~~G~a~ 336 (464)
+ |+++.+.|+++|+++++++++.||||+||++++||.. + | +.+....+...|+.+++.++|+++
T Consensus 202 ~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~ 279 (422)
T 2jbr_A 202 S--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAE 279 (422)
T ss_dssp G--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHHHHHHHH
T ss_pred C--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 7 8999999999999999999999999999999999864 3 4 556667788899999999999999
Q ss_pred HHHHHHHHHhhhhc--ccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCc----hhHHHHHHHHHHH
Q psy9220 337 FCFSMARSYMLDRV--QFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKE----SNLDT----PEMISILKRNNCA 406 (464)
Q Consensus 337 ~al~~a~~~~~~R~--~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d----~~~~~----~~~~~~aK~~~~~ 406 (464)
++++.+++|+++|+ +||+||+++|.+|++|++|.++++++|++++++++.++ .+.+. ...++++|.++++
T Consensus 280 ~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~~~~~~~~~aK~~a~e 359 (422)
T 2jbr_A 280 RMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVK 359 (422)
T ss_dssp HHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999998 99999999999999999999999999999999999998 55432 2468999999999
Q ss_pred HHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChH-HHHHHHHHHHhhCCCCC
Q psy9220 407 KALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTS-DIHALILGRAITGIQAF 464 (464)
Q Consensus 407 ~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~-~~~~~~i~r~l~~~~~~ 464 (464)
.+.++++.++|++||.||.++++++|+|||++...+++|++ ++++..+++.++|+|+.
T Consensus 360 ~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg~~~~ 418 (422)
T 2jbr_A 360 MCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPD 418 (422)
T ss_dssp HHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999 99999999999999863
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=6.4e-51 Score=446.25 Aligned_cols=378 Identities=19% Similarity=0.213 Sum_probs=319.8
Q ss_pred CcccCcccccccCCCCC-HHHHHHHHHHHHHHHhhcCCchhhhh-hcCCCChHHHHHHHHHcCCCCCCCCC-CCCCCCCH
Q psy9220 12 STKFNWEDALNISSLLT-QEEKLLRDSVKSFCDAVLHPKIVEDF-RHETSDVRAIYAEFGRLGILGCTLRG-YGCAGASH 88 (464)
Q Consensus 12 ~~~~~~~~~~~~~~~l~-~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~~~e~~~~l~~~Gl~~l~vP~-~GG~g~~~ 88 (464)
...|+++++ |.+.++ +|+.++++.+++|+++.... .... ....++ .+.|+.+++.|++.. +|+ || .+.
T Consensus 13 ~~~f~~~~l--~~~~~~~~e~~~lr~~vr~~l~~~~~~--~~~~~~~~~~~-~~~~~~l~~~g~l~~-~p~e~G---~~~ 83 (659)
T 1w07_A 13 KAEFDVEDM--KIVWAGSRHAFEVSDRIARLVASDPVF--EKSNRARLSRK-ELFKSTLRKCAHAFK-RIIELR---LNE 83 (659)
T ss_dssp TCSSCHHHH--HHHHHSSHHHHHHHHHHHHHHHTCGGG--CCTTTTSSCHH-HHHHHHHHHHHHHHH-HHHHTT---CCH
T ss_pred cCCCCHHHH--HHHHCCChHHHHHHHHHHHHHhcCccc--ccCCccCCChH-HHHHHHHHHHHHHHH-hHHHhC---CCc
Confidence 356777776 333455 88999999999999875322 1111 123456 789999998888875 676 98 345
Q ss_pred HHHHHHHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCC
Q psy9220 89 ISGGLVAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTE 168 (464)
Q Consensus 89 ~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~ 168 (464)
.+...+.+++ +.+++ +.+|..++...|..+|+++||++|||++++|+.++|+++|||++||
T Consensus 84 ~~~~~v~e~~---~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GS-------------- 144 (659)
T 1w07_A 84 EEAGRLRHFI---DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGS-------------- 144 (659)
T ss_dssp HHHHHHHHHH---CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSS--------------
T ss_pred hHHHHHHHHh---ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCC--------------
Confidence 6666665655 34443 6666556677888999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeEEEEeCCCCeEEEE-----eEEEeecC-CCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCch
Q psy9220 169 PNAGSDVANMQTRAKYDPSSNSYIIT-----GSKTWISS-APLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLA 242 (464)
Q Consensus 169 ~~~~~d~~~~~t~A~~~~~~~g~~ln-----G~K~~vs~-~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (464)
|+..++|+|++++++++|+|| |+|+|||+ +..||+++|+|+++.+
T Consensus 145 -----d~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~------------------------ 195 (659)
T 1w07_A 145 -----NVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITN------------------------ 195 (659)
T ss_dssp -----CGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEET------------------------
T ss_pred -----CcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCC------------------------
Confidence 999999999998656899999 99999999 7999999999998633
Q ss_pred hhhhhhhhcccCCCCCCCCCeEEEEEeC-C------CCCeEEeccCCccC---CcccCeeEEEEceeEeCccCcccc---
Q psy9220 243 DLCILWAKCEDATHGPQNPQIRGFIIEK-D------TPGYETSVIKGKFG---LRASVTGSISLDNVRVSQDQMLLL--- 309 (464)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~flV~~-~------~~Gv~i~~~~~~~G---~~~~~~~~v~f~nv~Vp~~~llg~--- 309 (464)
.+..++++|+||. + .|||++.++|+++| +++++++.+.|+||+||.+++||.
T Consensus 196 ---------------~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~ 260 (659)
T 1w07_A 196 ---------------GKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSK 260 (659)
T ss_dssp ---------------TEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEE
T ss_pred ---------------CCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCc
Confidence 1123688999995 5 69999999999999 999999999999999999999985
Q ss_pred ---cc-Ch------HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCc-------ccccCccHHHHHHHHHHH
Q psy9220 310 ---AN-SY------KAPFTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNK-------PLAANQIPQLKLANMLTD 372 (464)
Q Consensus 310 ---~~-g~------~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~-------~l~~~~~i~~~la~~~~~ 372 (464)
.+ ++ ......+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+++|.+|++|++|.++
T Consensus 261 v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~ 340 (659)
T 1w07_A 261 VTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLAS 340 (659)
T ss_dssp ECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHH
T ss_pred cCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHH
Confidence 33 33 24566788999999999999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-------cCCC-----chhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccc
Q psy9220 373 ISLALVSCCQVGRLKE-------SNLD-----TPEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVV 440 (464)
Q Consensus 373 l~~~r~~~~~~~~~~d-------~~~~-----~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~ 440 (464)
+++++++++++++.++ .+.. ....++++|.++++.+.++++.|+|+|||+||+.+++++|+|||++..
T Consensus 341 ~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~ 420 (659)
T 1w07_A 341 AYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPA 420 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhccee
Confidence 9999999999988763 3332 245789999999999999999999999999999999999999999999
Q ss_pred eeccChHHHHHHHHHHHhhCC
Q psy9220 441 NTYEGTSDIHALILGRAITGI 461 (464)
Q Consensus 441 ~~~~G~~~~~~~~i~r~l~~~ 461 (464)
.+++|++++++.++++.+++.
T Consensus 421 ~~~eG~~~v~~~~iar~lL~~ 441 (659)
T 1w07_A 421 CTYEGDNVVLQLQVARFLMKT 441 (659)
T ss_dssp GTTTSCHHHHHHHHHHHHHHH
T ss_pred EEEeCChHHHHHHHHHHHHHH
Confidence 999999999999999998864
No 36
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=2.1e-48 Score=416.95 Aligned_cols=328 Identities=19% Similarity=0.227 Sum_probs=289.2
Q ss_pred hHHHHHHHHHcCCCCCCC--CC-CCCCCCCHHHHHHHHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHh
Q psy9220 61 VRAIYAEFGRLGILGCTL--RG-YGCAGASHISGGLVAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELA 137 (464)
Q Consensus 61 ~~e~~~~l~~~Gl~~l~v--P~-~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~ 137 (464)
++++++.+++.||+++.+ |+ |||.+........+ +..+.+......++. .....|..+| ++||++|+|++.
T Consensus 88 ~~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~----~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~ 161 (541)
T 3djl_A 88 WHLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLH----AQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLL 161 (541)
T ss_dssp HHHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHH----HHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHT
T ss_pred HHHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHH----HHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHh
Confidence 478899999999999999 66 99654444333333 333444432333333 3445677788 999999999999
Q ss_pred cCCc-------------eEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEEeCCCCeEEEEeEEEeecCCC
Q psy9220 138 KGNL-------------IGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKYDPSSNSYIITGSKTWISSAP 204 (464)
Q Consensus 138 ~G~~-------------~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~ 204 (464)
+|+. +.|+++|||++|| |+..++|+|++++ +|+|+|||+|+|+| ++
T Consensus 162 sge~~p~~~~~~~~~g~~~~~a~TEp~~GS-------------------Dl~~~~T~A~~~~-~g~y~LnG~K~f~S-a~ 220 (541)
T 3djl_A 162 SDRYDSHLLPGGQKRGLLIGMGMTEKQGGS-------------------DVMSNTTRAERLE-DGSYRLVGHKWFFS-VP 220 (541)
T ss_dssp CSCCCCCSSCGGGSSSCCEEEECCBTTBSS-------------------CGGGCCCEEEECT-TSCEEEEEEEEEEE-CT
T ss_pred CCCcccccccccccccceeEEEeccCCcCC-------------------CcccceeEEEEcC-CCeEEEEEEEEeec-cc
Confidence 9998 7788888888888 9999999999974 57899999999999 99
Q ss_pred CCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCC-----CeEEec
Q psy9220 205 LADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKDTP-----GYETSV 279 (464)
Q Consensus 205 ~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~-----Gv~i~~ 279 (464)
.||+++|+|+++ . ++++|+||++.| ||++.+
T Consensus 221 ~Ad~~lVlArt~-~-------------------------------------------Gis~flVp~~~p~~~~~Gv~i~~ 256 (541)
T 3djl_A 221 QSDAHLVLAQTA-G-------------------------------------------GLSCFFVPRFLPDGQRNAIRLER 256 (541)
T ss_dssp TSSEEEEEEEET-T-------------------------------------------EEEEEEEESBCTTSCBCSEEEEE
T ss_pred ccCEEEEEEEEC-C-------------------------------------------ceEEEEEecCCCCCCcCCeEEee
Confidence 999999999985 2 589999999988 999999
Q ss_pred cCCccCCcccCeeEEEEceeEeCccCcccccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccc
Q psy9220 280 IKGKFGLRASVTGSISLDNVRVSQDQMLLLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNKPLAA 358 (464)
Q Consensus 280 ~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~~l~~ 358 (464)
.|+++|+++++++++.|+||+ +++||.++ |+.+....++..|+.+++.++|+++++++.+++|+++|++||+||++
T Consensus 257 ~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~ 333 (541)
T 3djl_A 257 LKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQ 333 (541)
T ss_dssp ECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred ccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCCchhh
Confidence 999999999999999999995 89999887 89999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc------hhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHH
Q psy9220 359 NQIPQLKLANMLTDISLALVSCCQVGRLKESNLDT------PEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIR 432 (464)
Q Consensus 359 ~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~------~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r 432 (464)
+|.+|++|++|.+++++++++++++++.++...+. ...++++|.++++.+.++++.++|++||+||.++++++|
T Consensus 334 ~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r 413 (541)
T 3djl_A 334 QPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 (541)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHH
Confidence 99999999999999999999999999999886432 345789999999999999999999999999999999999
Q ss_pred HHhhhccceeccChHHHHHHHHHHHhhCCC
Q psy9220 433 HMNNLEVVNTYEGTSDIHALILGRAITGIQ 462 (464)
Q Consensus 433 ~~rda~~~~~~~G~~~~~~~~i~r~l~~~~ 462 (464)
+|||+++..+++|++++++..|+|.+++.+
T Consensus 414 ~~Rda~~~~i~eGt~ei~~~~i~r~l~~~~ 443 (541)
T 3djl_A 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQA 443 (541)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHHHCT
T ss_pred HHHhhhhhheeCCcHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999998764
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=4.6e-47 Score=415.49 Aligned_cols=362 Identities=17% Similarity=0.199 Sum_probs=294.4
Q ss_pred CHHHHHHHHHHHHHHHhhcCCchhhhhhcCCCChHHHH-------HHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy9220 28 TQEEKLLRDSVKSFCDAVLHPKIVEDFRHETSDVRAIY-------AEFGRLGILGCTLRGYGCAGASHISGGLVAREIER 100 (464)
Q Consensus 28 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~-------~~l~~~Gl~~l~vP~~GG~g~~~~~~~~v~e~l~~ 100 (464)
+++..++++.+++++++. |..... ....++..+.+ ..+.+. +.+|||.+ ..+. .+.+++..
T Consensus 26 ~~~~~~~r~~~~~~l~~~--p~~~~~-~~~~~~~~e~~~~~~~~~~~l~~~------~~~~~~~~--~~~~-~~~~~~~~ 93 (661)
T 2ddh_A 26 SPENTRRRREIENLILND--PDFQHE-DYNFLTRSQRYEVAVKKSATMVKK------MREYGISD--PEEI-MWFKNSVH 93 (661)
T ss_dssp SHHHHHHHHHHHHHHHTC--GGGCCS-CGGGSCHHHHHHHHHHHHHHHHHH------HHHTTCCC--HHHH-HHHHHHHH
T ss_pred ChhHHHHHHHHHHHHhcC--cccccC-CcCCCCHHHHHHHHHHHHHHHHHH------HHHcCCCC--chHH-HHHHHHhc
Confidence 577889999999999875 321111 11112211221 222232 23488776 3333 34666665
Q ss_pred cCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCcee
Q psy9220 101 VDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQT 180 (464)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t 180 (464)
.+. +..+.+|..+++..|..+|+++|+++|||++++|++++|+++|||++|| |+..++|
T Consensus 94 ~~~--~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GS-------------------d~~~l~T 152 (661)
T 2ddh_A 94 RGH--PEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGT-------------------HLRGLET 152 (661)
T ss_dssp TTC--CCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSS-------------------CGGGCCC
T ss_pred cch--hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCc-------------------Cccccee
Confidence 433 2345667667778899999999999999999999999999999999999 9999999
Q ss_pred EEEEeCCCCeEEEE-----eEEEeecC-CCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccC
Q psy9220 181 RAKYDPSSNSYIIT-----GSKTWISS-APLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDA 254 (464)
Q Consensus 181 ~A~~~~~~~g~~ln-----G~K~~vs~-~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (464)
+|++++++++|+|| |+|+|+|+ +..||+++|+|+++.+
T Consensus 153 tA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~------------------------------------ 196 (661)
T 2ddh_A 153 TATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQ------------------------------------ 196 (661)
T ss_dssp EEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEET------------------------------------
T ss_pred EEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccC------------------------------------
Confidence 99998767899999 99999999 7899999999998632
Q ss_pred CCCCCCCCeEEEEEeC-C------CCCeEEeccCCccCCcccCeeEEEEceeEeCccCccccc-----cC-------hHH
Q psy9220 255 THGPQNPQIRGFIIEK-D------TPGYETSVIKGKFGLRASVTGSISLDNVRVSQDQMLLLA-----NS-------YKA 315 (464)
Q Consensus 255 ~~~~~~~~~~~flV~~-~------~~Gv~i~~~~~~~G~~~~~~~~v~f~nv~Vp~~~llg~~-----~g-------~~~ 315 (464)
.+..++++|+||. + .|||++.++|+++|+++++++++.|+||+||.+++||.. .| +..
T Consensus 197 ---~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~ 273 (661)
T 2ddh_A 197 ---GECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKL 273 (661)
T ss_dssp ---TEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC----
T ss_pred ---CCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHH
Confidence 1123689999994 4 799999999999999999999999999999999999873 23 456
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCc-------ccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9220 316 PFTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNK-------PLAANQIPQLKLANMLTDISLALVSCCQVGRLKE 388 (464)
Q Consensus 316 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~-------~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d 388 (464)
....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+++|.+|++|++|.+++++++.+++++++.++
T Consensus 274 ~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~ 353 (661)
T 2ddh_A 274 TYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYL 353 (661)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788999999999999999999999999999999998 8999999999999999999999999999998886
Q ss_pred c-------CCC-----chhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhccceeccChHHHHHHHHHH
Q psy9220 389 S-------NLD-----TPEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDIHALILGR 456 (464)
Q Consensus 389 ~-------~~~-----~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~~~~~i~r 456 (464)
. +.. ....++++|.++++.+.++++.|+++|||+||..+++++|+|||+++..+++|++++++.++++
T Consensus 354 ~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar 433 (661)
T 2ddh_A 354 RINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTAR 433 (661)
T ss_dssp C----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHH
T ss_pred HHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHH
Confidence 3 221 2456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCC
Q psy9220 457 AITGI 461 (464)
Q Consensus 457 ~l~~~ 461 (464)
.+++.
T Consensus 434 ~lL~~ 438 (661)
T 2ddh_A 434 FLMKI 438 (661)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98763
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=1.5e-36 Score=320.99 Aligned_cols=317 Identities=12% Similarity=0.056 Sum_probs=240.3
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhhHHHhhhhhHHHHHHhcCCHHHHHHHhHHHhcCCc
Q psy9220 62 RAIYAEFGRLGILGCTLRGYGCAGASHISGGLVAREIERVDSGYRSMYSVQSSLVMGAIDKYGSDKQKAKYLPELAKGNL 141 (464)
Q Consensus 62 ~e~~~~l~~~Gl~~l~vP~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~ 141 (464)
.++.++.+..|+++... +|-.|-++.-...++-.++- ....+..+ ++||++|||++++|++
T Consensus 78 ~dL~~~~~~~~lw~~~~--~g~~gRs~~~~~~~~~~~a~---------------~~~~~~~~--~eqk~~~L~~l~~Ge~ 138 (481)
T 2yyk_A 78 EDLKRRGQAYKLWADQN--LGMMGRSPDYLNAVVMAYAA---------------SADYFGEF--AENVRNYYRYLRDQDL 138 (481)
T ss_dssp HHHHHHHHHHHHHHHHT--TTCCCCCTHHHHHHHHHHHH---------------TGGGGGGG--HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhcC--CcccccChhhHHHHHHhccC---------------ChHHHHHH--HHHHHHHHHHHHcCCe
Confidence 77888888888887752 44334342111111111110 00111123 6899999999999999
Q ss_pred eEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEE-EeCCCCeEEEEeEEEeecCCCCCCEEEEEEEecCCCC
Q psy9220 142 IGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAK-YDPSSNSYIITGSKTWISSAPLADLCILWAKCEDPTH 220 (464)
Q Consensus 142 ~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~-~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~A~~~~~~~ 220 (464)
+.|+++|||+.|+. .-|..|||+. +.++++ ++ +|||+|||.|+|+|+ +.||+++|+|+++...
T Consensus 139 ~~a~a~TEP~~grs-----------~~~s~gsd~~-~~~~~~~~~--gdg~VlnG~K~~iT~-~~Ad~~iV~art~~~~- 202 (481)
T 2yyk_A 139 ATTHALTNPQVNRA-----------RPPSGQPDPY-IPVGVVKQT--EKGIVVRGARMTATF-PLADEVLIFPSILLQA- 202 (481)
T ss_dssp CEEEEECCCCCCTT-----------C----CCCSC-SBCEEEEEC--SSEEEEEEEEEEEEC-CCSSEEEECCCSCCCT-
T ss_pred EEEEeeECCCCCCC-----------CCccccCCcc-cceEEEEEE--CCEEEEEeEEEEecc-ccccEEEEEEecCCCC-
Confidence 99999999998730 1133455775 566665 55 889999999999999 9999999999985320
Q ss_pred CCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCeEEec--cCCc--------cCCcc-c
Q psy9220 221 GPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGYETSV--IKGK--------FGLRA-S 289 (464)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv~i~~--~~~~--------~G~~~-~ 289 (464)
+..+++++|+||.++|||++.. .+.. +|.+. .
T Consensus 203 -------------------------------------~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~ 245 (481)
T 2yyk_A 203 -------------------------------------GSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEE 245 (481)
T ss_dssp -------------------------------------TCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCC
T ss_pred -------------------------------------CCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCC
Confidence 0112478999999999999953 3332 56664 6
Q ss_pred CeeEEEEceeEeCccCcc--cccc-ChHHH--HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccCccHHH
Q psy9220 290 VTGSISLDNVRVSQDQML--LLAN-SYKAP--FTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFNKPLAANQIPQL 364 (464)
Q Consensus 290 ~~~~v~f~nv~Vp~~~ll--g~~~-g~~~~--~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~ 364 (464)
++++|.||||+||++++| |..+ ++... ...+..+|+..++..+|.++.++..+..++.. +| |+++|.+|+
T Consensus 246 ~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~g--i~~~q~vq~ 320 (481)
T 2yyk_A 246 MDCLVIFDDVLVPWERVFILGNVELCNNAYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---IG--ADVYGHVQE 320 (481)
T ss_dssp CEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT--GGGSHHHHH
T ss_pred CeEEEEEccEEECHHHccCCCCccHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--hhhhHHHHH
Confidence 889999999999999998 4444 44444 56788999999999999999999999988864 43 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---CC--CchhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHHHHhhhcc
Q psy9220 365 KLANMLTDISLALVSCCQVGRLKES---NL--DTPEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIRHMNNLEV 439 (464)
Q Consensus 365 ~la~~~~~l~~~r~~~~~~~~~~d~---~~--~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r~~rda~~ 439 (464)
+||+|.++++++|++++++++..+. +. +....++++|.++++.+.++++.++|++||.++. +|++|.| |.+.
T Consensus 321 ~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i 397 (481)
T 2yyk_A 321 KIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPL 397 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-Chhh
Confidence 9999999999999999999999874 32 4456799999999999999999999999998876 8888888 8843
Q ss_pred ce------eccChHHHHHHHHHHHh
Q psy9220 440 VN------TYEGTSDIHALILGRAI 458 (464)
Q Consensus 440 ~~------~~~G~~~~~~~~i~r~l 458 (464)
.. ...|++++++..|+|.+
T Consensus 398 ~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 398 GPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp HHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred hHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 22 22499999998888754
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.2e-36 Score=322.14 Aligned_cols=268 Identities=15% Similarity=0.089 Sum_probs=212.9
Q ss_pred HHHhcCC--HHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCC-CCceeEEEEeCCCCeEEEEe
Q psy9220 119 AIDKYGS--DKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDV-ANMQTRAKYDPSSNSYIITG 195 (464)
Q Consensus 119 ~l~~~g~--~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~-~~~~t~A~~~~~~~g~~lnG 195 (464)
.+..+|+ ++||++||+++++|+++.|+++|||+.|+ -.-|..|||+ ..++ +|+++ ++||+|||
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~r-----------s~~~~~gSD~~~~~~-~a~r~--gdg~vlnG 184 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDR-----------GLAPSAQKDPDLFLR-IVEKR--EDGIVVRG 184 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCT-----------TSCGGGCSSTTSSCE-EEEEC--SSEEEEEE
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCC-----------cccccccCCcccceE-EEEEE--CCEEEEEe
Confidence 4458999 99999999999999999999999999763 0113345685 3445 78887 89999999
Q ss_pred EEEeecCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCe
Q psy9220 196 SKTWISSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGY 275 (464)
Q Consensus 196 ~K~~vs~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv 275 (464)
.|+|+|+++.||+++|+|+++... ...+.+++|+||.++|||
T Consensus 185 ~K~~iT~a~~Ad~~iV~art~~~~--------------------------------------~~~~~~s~flVp~d~pGv 226 (490)
T 1u8v_A 185 AKAHQTGSINSHEHIIMPTIAMTE--------------------------------------ADKDYAVSFACPSDADGL 226 (490)
T ss_dssp EECSCTTCTTCSEEEECCSSCCCG--------------------------------------GGGGGCEEEEEETTCTTE
T ss_pred EEEEeeCCcccCEEEEEEecCCCC--------------------------------------CCCCeEEEEEEECCCCCE
Confidence 999999999999999999975220 001247899999999999
Q ss_pred EEec---cCCc----------cCC-cc-cCeeEEEEceeEeCccCcc--cccc-ChHHHHHhhhHHHHHHHHHHHHHHHH
Q psy9220 276 ETSV---IKGK----------FGL-RA-SVTGSISLDNVRVSQDQML--LLAN-SYKAPFTLLNSARYGIAWGVLGAAEF 337 (464)
Q Consensus 276 ~i~~---~~~~----------~G~-~~-~~~~~v~f~nv~Vp~~~ll--g~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~ 337 (464)
++.. .+.+ +|+ +. .++++|.||||+||++++| |..+ ++......+...|+.+++.++|.++.
T Consensus 227 ~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~ 306 (490)
T 1u8v_A 227 FMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQEYDFAGMMVERFAGYHRQSYGGCKVGVGDV 306 (490)
T ss_dssp EEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESCGGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9953 4443 666 63 6788999999999999998 5555 67666677778888888877777777
Q ss_pred HHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC--CchhHHHHHHHHHHHHHHHHH
Q psy9220 338 CFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKES---NL--DTPEMISILKRNNCAKALDIA 412 (464)
Q Consensus 338 al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~---~~--~~~~~~~~aK~~~~~~a~~v~ 412 (464)
++..+...... + +|+++|.+|++||+|.++++++|++++++++..+. +. +....++++|.++++.+.+++
T Consensus 307 ~lG~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~ 381 (490)
T 1u8v_A 307 VIGAAALAADY---N--GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYPTAAGNYQIDLLLANVCKQNITRFPYEIV 381 (490)
T ss_dssp HHHHHHHHHHH---H--TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHh---c--CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHH
Confidence 77766554432 3 38999999999999999999999999999999874 22 345679999999999999999
Q ss_pred HHHHHHhCcccccCcccHHHHHhhh-ccceeccC
Q psy9220 413 RNARDMLGGNGISDEYHVIRHMNNL-EVVNTYEG 445 (464)
Q Consensus 413 ~~a~~~~Gg~g~~~~~~l~r~~rda-~~~~~~~G 445 (464)
+.++|++||.|+. +|++|+|||. +...+.+.
T Consensus 382 ~~a~qi~Gg~g~~--~p~er~~rd~~~~~~~~~~ 413 (490)
T 1u8v_A 382 RLAEDIAGGLMVT--MPSEADFKSETVVGRDGET 413 (490)
T ss_dssp HHHHHHHCTHHHH--CCCHHHHTCCCBCSTTSCB
T ss_pred HHHHHHhCcchhc--ChHHHHHhCchhccccchh
Confidence 9999999999997 6777777776 34444433
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=4e-31 Score=280.28 Aligned_cols=273 Identities=12% Similarity=0.101 Sum_probs=201.9
Q ss_pred cCC--HHHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEEeCCCCeEEEEeEEEee
Q psy9220 123 YGS--DKQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKYDPSSNSYIITGSKTWI 200 (464)
Q Consensus 123 ~g~--~~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~lnG~K~~v 200 (464)
+++ .+|+++||+++++|+++.++++|||+.|. . .-|..|||+ .++++ +++ ++||+|||.|.||
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~r--------s---~~~~~GSD~-~~~~~-~~~--gdg~VlnG~K~~i 191 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDR--------S---SDAAQARSP-NLRIV-EKT--DDGIIVNGVKAVG 191 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCC--------C---SCTTTSCCS-BCEEE-EEC--SSEEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCc--------c---cccccCCCc-ceEEE-EEE--CCEEEEEEEEEEE
Confidence 554 57899999999999999999999999753 0 113346688 55544 344 7899999999999
Q ss_pred cCCCCCCEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCeEEecc
Q psy9220 201 SSAPLADLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGYETSVI 280 (464)
Q Consensus 201 s~~~~Ad~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv~i~~~ 280 (464)
|+++.||+++|+|++++.. ++. .+++|+||.++|||++...
T Consensus 192 T~a~~Ad~~lV~a~t~~~~--------------------------------------~~~-~~s~FlVp~d~pGv~v~~~ 232 (515)
T 3hwc_A 192 TGIAFGDYMHIGCLYRPGI--------------------------------------PGE-QVIFAAIPTNTPGVTVFCR 232 (515)
T ss_dssp ESGGGCSEEEECCCCCTTC--------------------------------------CGG-GCEEEEEETTCTTEEEEEC
T ss_pred CCccccCEEEEEEEecCCC--------------------------------------CCC-eEEEEEEECCCCCeEEeec
Confidence 9999999999999873220 111 2899999999999999877
Q ss_pred CCccCC-----c-----ccCeeEEEEceeEeCccCcc--cccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9220 281 KGKFGL-----R-----ASVTGSISLDNVRVSQDQML--LLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFSMARSYML 347 (464)
Q Consensus 281 ~~~~G~-----~-----~~~~~~v~f~nv~Vp~~~ll--g~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~ 347 (464)
+..+|. + +..+++|.||||+||++++| |..+ |+......+...+....+..+|.++.++..+..++.
T Consensus 233 ~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e 312 (515)
T 3hwc_A 233 ESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRIFDWVHYHILIRQVLRAELIVGLAILITE 312 (515)
T ss_dssp CCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776663 2 23488999999999999999 6666 766553333333222223445555555555555443
Q ss_pred hhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC--CchhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Q psy9220 348 DRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKES---NL--DTPEMISILKRNNCAKALDIARNARDMLGGN 422 (464)
Q Consensus 348 ~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~---~~--~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~ 422 (464)
. + +|+++|.+|++||+|.++++++|+++++++...+. +. +....++++|.++++.+.++++.++|++||.
T Consensus 313 ~---~--gI~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~~~as~AK~~ase~~~rv~~~a~qi~GG~ 387 (515)
T 3hwc_A 313 H---I--GTSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNPLIYDFGRAHFLQNQMSVMYELLDLAGRS 387 (515)
T ss_dssp H---H--TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred H---c--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2 3 39999999999999999999999999999998875 22 4566799999999999999999999999999
Q ss_pred cccCcc-----------cHHHHHhhhccceeccChHHHHHHHHHHHh
Q psy9220 423 GISDEY-----------HVIRHMNNLEVVNTYEGTSDIHALILGRAI 458 (464)
Q Consensus 423 g~~~~~-----------~l~r~~rda~~~~~~~G~~~~~~~~i~r~l 458 (464)
+++-.+ .+++|++-. . ....+.+....+..-+
T Consensus 388 ~i~~Ps~~d~~~pe~~~~l~ky~~g~---~-~~a~~R~kl~rl~~d~ 430 (515)
T 3hwc_A 388 SLMIPSEGQWDDSQSGQWFVKLNNGP---K-GNPRERVQIGRVIRDL 430 (515)
T ss_dssp GTSCCCHHHHHCTTTHHHHHHHTCCT---T-CCTHHHHHHHHHHHHH
T ss_pred eeeCCCHHHhcCchhHHHHHHHhCCC---C-CCHHHHHHHHHHHHHH
Confidence 987432 256666532 1 2444444444444444
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.95 E-value=1.1e-26 Score=246.52 Aligned_cols=249 Identities=12% Similarity=0.037 Sum_probs=193.0
Q ss_pred HHHHHHhHHHhcCCceEEEeecCCCCCCCcccccccccCCCCCCCCCCCCCceeEEEEeCCCCeEEEEeEEEeecCCCCC
Q psy9220 127 KQKAKYLPELAKGNLIGCFGLTEPNAGSDVANMQTRCFGLTEPNAGSDVANMQTRAKYDPSSNSYIITGSKTWISSAPLA 206 (464)
Q Consensus 127 ~q~~~~l~~l~~G~~~~~~a~tEp~~gs~~~~~~~~~~~~~~~~~~~d~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~A 206 (464)
+...+|+..+.++++..+.++|+|.. . |.+...|.. |+. ++ .++++ ++||+|||.|.|+|+++.|
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~-d-------Rs~~~~~q~---d~~-l~-Vve~~--~dGiVVnGaK~~~T~a~~A 198 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQM-D-------RSNPDAQQR---SPG-LR-VIEKN--DKGIVVSGVKAIGTGVAFA 198 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC----------------------CB-CE-EEEEC--SSEEEEEEEEEEEESGGGC
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCC-C-------CCCCchhcC---CCc-eE-EEEEc--CCeEEEeeEehhhcCcccc
Confidence 45678999999999999999999983 2 455666554 542 33 23444 7899999999999999999
Q ss_pred CEEEEEEEecCCCCCCCCCCccccccccCCCCCCchhhhhhhhhcccCCCCCCCCCeEEEEEeCCCCCeEEeccCCccCC
Q psy9220 207 DLCILWAKCEDPTHGPQNPQIRGFIIEKDTPGAPLADLCILWAKCEDATHGPQNPQIRGFIIEKDTPGYETSVIKGKFGL 286 (464)
Q Consensus 207 d~~~v~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~flV~~~~~Gv~i~~~~~~~G~ 286 (464)
|+++|++++.+. ...+..+.|+||.|+||+++.......+.
T Consensus 199 d~i~V~a~t~~~---------------------------------------~~~d~~~~F~VP~dtPGv~~i~r~~~~~~ 239 (517)
T 4g5e_A 199 DWIHIGVFFRPG---------------------------------------IPGDQIIFAATPVNTPGVTIVCRESVVKE 239 (517)
T ss_dssp SEEEECCCCCTT---------------------------------------CCGGGCEEEEEETTCTTEEEEECCCCCCS
T ss_pred CEEEEEeecCCC---------------------------------------CCccceEEEEEecCCCCeEEEecccccCC
Confidence 999999987543 12235788999999999999665544443
Q ss_pred ccc----------CeeEEEEceeEeCccCcc--cccc-ChHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q psy9220 287 RAS----------VTGSISLDNVRVSQDQML--LLAN-SYKAPFTLLNSARYGIAWGVLGAAEFCFSMARSYMLDRVQFN 353 (464)
Q Consensus 287 ~~~----------~~~~v~f~nv~Vp~~~ll--g~~~-g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~~~~R~~~g 353 (464)
+.. ..+.+.||||+||+|++| |..+ ++.+....+...|+..++..+|.++.++..+..++...
T Consensus 240 ~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae~~---- 315 (517)
T 4g5e_A 240 DPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHALIRQSVRAELMAGLAILITEHI---- 315 (517)
T ss_dssp CTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 322 347899999999999987 5555 66777777888899999999999999999999888653
Q ss_pred cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCchhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcc
Q psy9220 354 KPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESN-----LDTPEMISILKRNNCAKALDIARNARDMLGGNGISDEY 428 (464)
Q Consensus 354 ~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~-----~~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~ 428 (464)
.+.++|+||++|++|.+.++++|++++.++...+.. .+....++++|.++++.+.+++++++|++||.|++-
T Consensus 316 -Gi~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~~a~~~~~rv~~eaiqi~GG~g~~~-- 392 (517)
T 4g5e_A 316 -GTNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRALYLENFSQMIYELVDLSGRSALIF-- 392 (517)
T ss_dssp -TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCC--
T ss_pred -CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC--
Confidence 389999999999999999999999999888765442 245678899999999999999999999999999973
Q ss_pred cHHHHHhh
Q psy9220 429 HVIRHMNN 436 (464)
Q Consensus 429 ~l~r~~rd 436 (464)
|-++-|+|
T Consensus 393 Pse~d~~~ 400 (517)
T 4g5e_A 393 ASEDQWND 400 (517)
T ss_dssp CCHHHHHC
T ss_pred CCHHHhcC
Confidence 33344443
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=91.98 E-value=1.4 Score=47.10 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-chhHHHHHHHHHHHHHHHH
Q psy9220 334 AAEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKES-NLD-TPEMISILKRNNCAKALDI 411 (464)
Q Consensus 334 ~a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~-~~~-~~~~~~~aK~~~~~~a~~v 411 (464)
.+...+..+..++..| +|+.|.+.|.+..++|++.++++++.+.+.++-+.... +.+ ......+++.++.+...++
T Consensus 466 ~~~~~~~~~~~~~~~~--~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
T 3owa_A 466 NAKKIGLMVAGLAAQK--YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEI 543 (597)
T ss_dssp HHHHHHHHHHHHHHHH--HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 3333444444444443 56889999999999999999999999999999988764 544 3567899999999999999
Q ss_pred HHHHHHHhCcccccCcccHHHHHhhhccceeccChHHH-HHHHHHHHhh
Q psy9220 412 ARNARDMLGGNGISDEYHVIRHMNNLEVVNTYEGTSDI-HALILGRAIT 459 (464)
Q Consensus 412 ~~~a~~~~Gg~g~~~~~~l~r~~rda~~~~~~~G~~~~-~~~~i~r~l~ 459 (464)
-..+.+++ .++.++..+..++..++-+.-+...+.+ ++..|++.++
T Consensus 544 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 590 (597)
T 3owa_A 544 EAHAKETL--IAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKIL 590 (597)
T ss_dssp HHHHHHHH--HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HhhccchHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHH
Confidence 99999998 6666777777777777666666655543 3567777764
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=66.08 E-value=35 Score=36.30 Aligned_cols=85 Identities=15% Similarity=0.048 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHhhhhcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhHHHHHHHHHHHHHHHHHH
Q psy9220 335 AEFCFSMARSYMLDRVQFNKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDT-PEMISILKRNNCAKALDIAR 413 (464)
Q Consensus 335 a~~al~~a~~~~~~R~~~g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~-~~~~~~aK~~~~~~a~~v~~ 413 (464)
+...+..+...+.. ..|..+.+.|.+..+|+++...++++-+.+.++.+....+.+. .....+++.++.+...++-.
T Consensus 491 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~ 568 (607)
T 2uxw_A 491 ALEQFATVVEAKLI--KHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIRE 568 (607)
T ss_dssp HHHHHHHHHHHHHH--HHGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 33334444434332 3457888889999999999999999999999988776666544 34578899999888888888
Q ss_pred HHHHHhCc
Q psy9220 414 NARDMLGG 421 (464)
Q Consensus 414 ~a~~~~Gg 421 (464)
.+.++..+
T Consensus 569 ~~~~~~~~ 576 (607)
T 2uxw_A 569 GMAALQSD 576 (607)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 77775544
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=57.24 E-value=1.5e+02 Score=30.87 Aligned_cols=100 Identities=12% Similarity=-0.010 Sum_probs=69.0
Q ss_pred CcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccHHH
Q psy9220 353 NKPLAANQIPQLKLANMLTDISLALVSCCQVGRLKESNLDTPEMISILKRNNCAKALDIARNARDMLGGNGISDEYHVIR 432 (464)
Q Consensus 353 g~~l~~~~~i~~~la~~~~~l~~~r~~~~~~~~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~~~~Gg~g~~~~~~l~r 432 (464)
|..+.+.|.+-.+++++.+.++.+++.+.++.+. .+. ...+++.++.+...++...+.+++-+ +.+..+..-
T Consensus 469 ~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 540 (577)
T 2z1q_A 469 GQGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVLPR--LVEGDEARV 540 (577)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHGGG--TCCTTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHHHH--HHcCCchhH
Confidence 4566667889999999999999999998887765 222 78899999999888888887777633 334433222
Q ss_pred HHhhhcc-ceeccChHHHHHHHHHHHhhC
Q psy9220 433 HMNNLEV-VNTYEGTSDIHALILGRAITG 460 (464)
Q Consensus 433 ~~rda~~-~~~~~G~~~~~~~~i~r~l~~ 460 (464)
....++. ......+++-+...|++.++.
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ia~~~~~ 569 (577)
T 2z1q_A 541 VYSAARRLTKREPGDLVALRRQAAEAVLE 569 (577)
T ss_dssp HHHHHHHHTCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHh
Confidence 2222221 234445677777888888753
Done!