Query psy9226
Match_columns 548
No_of_seqs 134 out of 2159
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 22:07:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 9.5E-67 3.3E-71 557.9 44.0 432 18-548 20-467 (536)
2 3g7s_A Long-chain-fatty-acid-- 100.0 5.2E-66 1.8E-70 553.8 42.3 443 8-548 7-472 (549)
3 3rix_A Luciferase, luciferin 4 100.0 4.8E-66 1.6E-70 554.2 38.7 438 17-548 17-472 (550)
4 1mdb_A 2,3-dihydroxybenzoate-A 100.0 3.5E-65 1.2E-69 546.0 43.1 429 18-548 23-463 (539)
5 3etc_A AMP-binding protein; ad 100.0 1.8E-64 6.3E-69 544.1 47.1 438 18-548 53-508 (580)
6 2d1s_A Luciferase, luciferin 4 100.0 9.4E-65 3.2E-69 543.5 43.4 433 20-548 25-474 (548)
7 3o83_A Peptide arylation enzym 100.0 8.7E-65 3E-69 543.5 41.1 432 19-548 29-472 (544)
8 4fuq_A Malonyl COA synthetase; 100.0 1.2E-64 4E-69 537.4 41.6 421 24-548 4-432 (503)
9 3r44_A Fatty acyl COA syntheta 100.0 7.6E-65 2.6E-69 540.6 39.1 433 9-548 5-446 (517)
10 1v25_A Long-chain-fatty-acid-C 100.0 2.2E-64 7.4E-69 540.1 41.8 429 17-548 15-468 (541)
11 1pg4_A Acetyl-COA synthetase; 100.0 4.1E-64 1.4E-68 548.7 42.5 439 20-548 76-550 (652)
12 1ry2_A Acetyl-coenzyme A synth 100.0 7.6E-64 2.6E-68 546.9 44.6 442 20-548 82-559 (663)
13 1t5h_X 4-chlorobenzoyl COA lig 100.0 6.4E-64 2.2E-68 532.2 42.6 421 20-548 2-435 (504)
14 1amu_A GRSA, gramicidin synthe 100.0 1.2E-63 4.2E-68 536.1 44.7 416 18-548 37-463 (563)
15 3ivr_A Putative long-chain-fat 100.0 2E-63 6.7E-68 529.2 43.5 424 18-548 4-433 (509)
16 3fce_A D-alanine--poly(phospho 100.0 1E-63 3.5E-68 531.8 40.3 419 20-548 1-432 (512)
17 3c5e_A Acyl-coenzyme A synthet 100.0 8.5E-63 2.9E-67 530.3 44.4 432 19-548 37-489 (570)
18 4dg8_A PA1221; ANL superfamily 100.0 4.6E-63 1.6E-67 536.2 40.6 414 18-547 25-451 (620)
19 4gr5_A Non-ribosomal peptide s 100.0 2.9E-63 9.9E-68 534.7 37.8 417 18-548 73-502 (570)
20 2v7b_A Benzoate-coenzyme A lig 100.0 1.6E-62 5.6E-67 524.7 42.2 431 20-548 24-462 (529)
21 3e7w_A D-alanine--poly(phospho 100.0 3.2E-62 1.1E-66 520.0 44.2 417 20-548 1-431 (511)
22 3l8c_A D-alanine--poly(phospho 100.0 1.3E-62 4.3E-67 524.7 38.3 418 19-548 3-436 (521)
23 3rg2_A Enterobactin synthase c 100.0 7.9E-62 2.7E-66 528.2 44.0 429 18-548 25-467 (617)
24 3tsy_A Fusion protein 4-coumar 100.0 1.2E-62 4.2E-67 561.5 39.1 438 19-548 60-514 (979)
25 3ipl_A 2-succinylbenzoate--COA 100.0 8.2E-62 2.8E-66 515.9 34.7 421 20-548 1-431 (501)
26 3kxw_A Saframycin MX1 syntheta 100.0 9.2E-62 3.2E-66 526.1 35.1 430 17-548 8-494 (590)
27 3gqw_A Fatty acid AMP ligase; 100.0 3.5E-60 1.2E-64 512.4 39.5 432 12-548 13-494 (576)
28 3nyq_A Malonyl-COA ligase; A/B 100.0 1.8E-60 6.2E-65 505.2 28.2 410 18-548 20-439 (505)
29 2vsq_A Surfactin synthetase su 100.0 2.1E-59 7.1E-64 547.9 38.8 428 10-547 454-893 (1304)
30 3ite_A SIDN siderophore synthe 100.0 4.1E-59 1.4E-63 502.1 36.2 419 16-547 16-460 (562)
31 3t5a_A Long-chain-fatty-acid-- 100.0 7E-56 2.4E-60 468.0 36.0 397 18-513 22-480 (480)
32 3qov_A Phenylacetate-coenzyme 100.0 1.6E-39 5.5E-44 338.4 22.2 266 181-548 81-364 (436)
33 4gs5_A Acyl-COA synthetase (AM 100.0 1.6E-39 5.6E-44 328.5 19.4 245 184-547 36-285 (358)
34 2y4o_A Phenylacetate-coenzyme 100.0 4.8E-38 1.6E-42 328.0 22.4 265 181-548 88-368 (443)
35 2y27_A Phenylacetate-coenzyme 100.0 6.5E-38 2.2E-42 326.4 21.9 264 181-547 86-365 (437)
36 3hgu_A EHPF; phenazine, antibi 100.0 4.5E-28 1.5E-32 246.3 17.0 203 182-398 88-320 (369)
37 4eql_A 4-substituted benzoates 98.7 1.1E-07 3.9E-12 99.4 13.5 44 494-537 400-447 (581)
38 4b2g_A GH3-1 auxin conjugating 98.5 5.9E-07 2E-11 94.2 12.8 43 494-536 412-458 (609)
39 4epl_A Jasmonic acid-amido syn 98.5 7.2E-07 2.5E-11 93.1 12.2 43 494-536 407-453 (581)
40 3lax_A Phenylacetate-coenzyme 98.1 8.3E-07 2.8E-11 72.2 2.4 37 512-548 1-37 (109)
41 3gxs_A Phenylacetate-coenzyme 98.0 1.7E-06 5.9E-11 70.3 2.4 37 512-548 1-37 (109)
42 2y27_A Phenylacetate-coenzyme 90.8 1.8 6.2E-05 43.6 12.2 89 45-134 109-199 (437)
43 3qov_A Phenylacetate-coenzyme 90.5 2 6.9E-05 43.2 12.2 89 45-134 105-195 (436)
44 2y4o_A Phenylacetate-coenzyme 90.4 2 6.9E-05 43.3 12.0 89 45-134 111-201 (443)
45 3ipl_A 2-succinylbenzoate--COA 81.8 16 0.00053 37.3 13.4 98 33-134 161-268 (501)
46 3g7s_A Long-chain-fatty-acid-- 79.5 21 0.00073 36.8 13.7 102 183-288 32-138 (549)
47 3rix_A Luciferase, luciferin 4 77.7 10 0.00035 39.3 10.5 98 185-288 35-136 (550)
48 3ivr_A Putative long-chain-fat 77.2 18 0.00061 37.0 12.1 94 183-287 19-116 (509)
49 3ni2_A 4-coumarate:COA ligase; 75.9 17 0.00059 37.4 11.6 97 182-287 34-134 (536)
50 1v25_A Long-chain-fatty-acid-C 75.9 29 0.001 35.7 13.4 99 183-288 31-133 (541)
51 3o83_A Peptide arylation enzym 75.7 41 0.0014 34.6 14.5 97 33-133 189-297 (544)
52 2d1s_A Luciferase, luciferin 4 74.9 14 0.00048 38.2 10.6 97 35-133 192-299 (548)
53 1mdb_A 2,3-dihydroxybenzoate-A 74.6 32 0.0011 35.4 13.2 98 33-134 180-289 (539)
54 3t5a_A Long-chain-fatty-acid-- 74.4 30 0.001 34.8 12.8 106 182-289 36-147 (480)
55 3hgu_A EHPF; phenazine, antibi 74.4 8.4 0.00029 37.5 8.3 85 45-131 110-219 (369)
56 3c5e_A Acyl-coenzyme A synthet 73.6 37 0.0013 35.3 13.5 100 183-288 56-160 (570)
57 1t5h_X 4-chlorobenzoyl COA lig 72.0 36 0.0012 34.6 12.8 97 183-288 15-117 (504)
58 1amu_A GRSA, gramicidin synthe 71.2 39 0.0013 35.0 13.0 95 183-288 52-150 (563)
59 1pg4_A Acetyl-COA synthetase; 70.6 42 0.0014 35.5 13.3 95 183-282 89-187 (652)
60 3etc_A AMP-binding protein; ad 69.0 39 0.0013 35.2 12.4 95 182-282 68-166 (580)
61 3r44_A Fatty acyl COA syntheta 68.8 32 0.0011 35.1 11.6 95 183-286 29-127 (517)
62 2v7b_A Benzoate-coenzyme A lig 68.3 29 0.001 35.5 11.2 82 204-287 48-133 (529)
63 3kxw_A Saframycin MX1 syntheta 67.7 61 0.0021 33.5 13.7 101 182-289 23-130 (590)
64 1ry2_A Acetyl-coenzyme A synth 65.7 47 0.0016 35.2 12.4 96 183-283 95-195 (663)
65 3tbh_A O-acetyl serine sulfhyd 64.2 51 0.0017 31.5 11.2 90 35-126 35-127 (334)
66 4fuq_A Malonyl COA synthetase; 63.9 34 0.0012 34.8 10.5 79 204-284 28-110 (503)
67 4gr5_A Non-ribosomal peptide s 63.7 53 0.0018 34.0 12.2 91 183-284 88-182 (570)
68 3rg2_A Enterobactin synthase c 63.1 1.2E+02 0.0041 31.6 14.9 97 34-134 183-291 (617)
69 4gs5_A Acyl-COA synthetase (AM 62.1 43 0.0015 32.3 10.4 105 22-132 27-138 (358)
70 3fce_A D-alanine--poly(phospho 61.1 29 0.001 35.3 9.4 96 33-131 142-249 (512)
71 3e7w_A D-alanine--poly(phospho 59.8 37 0.0012 34.6 9.9 96 33-131 141-248 (511)
72 3tsy_A Fusion protein 4-coumar 56.5 31 0.001 38.6 9.2 94 182-284 73-170 (979)
73 3gqw_A Fatty acid AMP ligase; 55.5 62 0.0021 33.3 11.0 84 203-288 48-142 (576)
74 3ite_A SIDN siderophore synthe 49.7 1.6E+02 0.0053 30.2 12.9 97 182-282 32-134 (562)
75 3nyq_A Malonyl-COA ligase; A/B 49.4 1.1E+02 0.0036 31.1 11.3 96 33-133 153-259 (505)
76 3l8c_A D-alanine--poly(phospho 47.3 56 0.0019 33.2 8.9 77 204-282 29-109 (521)
77 3vc3_A Beta-cyanoalnine syntha 46.6 94 0.0032 29.8 9.8 89 36-126 51-142 (344)
78 4dg8_A PA1221; ANL superfamily 41.7 1.1E+02 0.0038 32.0 10.3 88 183-281 40-131 (620)
79 1z7w_A Cysteine synthase; tran 40.5 1.4E+02 0.0048 28.1 9.9 90 35-126 30-122 (322)
80 2q3b_A Cysteine synthase A; py 39.7 2.4E+02 0.0081 26.3 11.4 88 36-126 32-122 (313)
81 4aec_A Cysteine synthase, mito 39.2 1.4E+02 0.0048 29.6 9.9 64 62-125 165-229 (430)
82 4eez_A Alcohol dehydrogenase 1 36.7 85 0.0029 29.9 7.8 78 45-125 136-216 (348)
83 2egu_A Cysteine synthase; O-ac 35.1 2.6E+02 0.009 25.9 10.9 89 35-126 29-120 (308)
84 2pqm_A Cysteine synthase; OASS 34.8 2.5E+02 0.0086 26.6 10.8 88 36-126 43-133 (343)
85 3l6b_A Serine racemase; pyrido 34.6 92 0.0031 29.9 7.6 58 70-128 76-133 (346)
86 3dwg_A Cysteine synthase B; su 34.4 3E+02 0.01 25.9 11.2 64 62-126 64-128 (325)
87 1y7l_A O-acetylserine sulfhydr 30.6 3.3E+02 0.011 25.3 10.7 89 35-126 26-117 (316)
88 3tqh_A Quinone oxidoreductase; 30.5 1.4E+02 0.0049 27.9 8.2 76 45-124 125-203 (321)
89 3ju7_A Putative PLP-dependent 29.3 1.6E+02 0.0056 28.2 8.6 62 60-124 68-136 (377)
90 1o58_A O-acetylserine sulfhydr 27.3 3.7E+02 0.013 24.8 10.5 86 36-126 32-120 (303)
91 3goh_A Alcohol dehydrogenase, 26.9 1.5E+02 0.0053 27.5 7.7 73 45-122 115-190 (315)
92 1zsy_A Mitochondrial 2-enoyl t 26.5 2.3E+02 0.0079 26.9 9.0 79 45-123 139-222 (357)
93 4h27_A L-serine dehydratase/L- 26.3 1.4E+02 0.0048 28.8 7.3 60 70-129 92-151 (364)
94 3jv7_A ADH-A; dehydrogenase, n 26.3 2.6E+02 0.0088 26.3 9.3 78 46-126 143-225 (345)
95 2vsq_A Surfactin synthetase su 26.1 2.4E+02 0.008 32.6 10.3 91 183-284 477-571 (1304)
96 1ve1_A O-acetylserine sulfhydr 25.8 4E+02 0.014 24.6 11.1 89 36-126 25-117 (304)
97 3two_A Mannitol dehydrogenase; 25.5 1.7E+02 0.006 27.7 7.8 74 45-122 149-225 (348)
98 4eye_A Probable oxidoreductase 25.0 4E+02 0.014 24.9 10.4 78 45-125 131-212 (342)
99 4ej6_A Putative zinc-binding d 24.9 2.2E+02 0.0074 27.3 8.5 58 62-123 175-233 (370)
100 2rkb_A Serine dehydratase-like 24.8 1.9E+02 0.0064 27.1 7.8 57 73-129 56-112 (318)
101 3uog_A Alcohol dehydrogenase; 24.5 3.4E+02 0.012 25.7 9.8 76 44-123 160-239 (363)
102 2jtq_A Phage shock protein E; 23.9 1.7E+02 0.0057 20.9 5.8 46 44-96 22-67 (85)
103 4h1h_A LMO1638 protein; MCCF-l 23.9 2.1E+02 0.0071 27.1 7.9 15 66-80 8-22 (327)
104 2d1f_A Threonine synthase; ami 22.9 2.5E+02 0.0084 26.9 8.3 89 35-129 53-144 (360)
105 3aey_A Threonine synthase; PLP 22.7 2E+02 0.0069 27.4 7.6 58 72-129 78-136 (351)
106 2zsj_A Threonine synthase; PLP 22.5 2.2E+02 0.0075 27.2 7.9 87 37-129 49-138 (352)
107 1h2b_A Alcohol dehydrogenase; 22.2 2.6E+02 0.009 26.5 8.4 62 61-125 176-239 (359)
108 1gu7_A Enoyl-[acyl-carrier-pro 22.1 2.1E+02 0.0071 27.3 7.7 80 45-124 138-223 (364)
109 4d9i_A Diaminopropionate ammon 22.0 5.4E+02 0.019 24.8 10.9 59 73-131 114-172 (398)
110 1p5j_A L-serine dehydratase; l 21.8 2.2E+02 0.0076 27.5 7.7 58 72-129 94-151 (372)
111 3s2e_A Zinc-containing alcohol 21.7 2.5E+02 0.0085 26.4 8.1 77 45-125 139-218 (340)
112 3ss7_X D-serine dehydratase; t 21.7 2.8E+02 0.0094 27.5 8.6 98 35-132 101-221 (442)
113 2v03_A Cysteine synthase B; py 21.3 4.8E+02 0.017 24.0 11.1 87 36-125 26-115 (303)
114 2ayi_A Aminopeptidase T; metal 21.2 1.7E+02 0.0058 28.8 6.7 51 51-101 4-58 (408)
115 4dup_A Quinone oxidoreductase; 21.1 3.1E+02 0.01 26.0 8.6 77 45-124 139-219 (353)
116 3sr3_A Microcin immunity prote 20.9 2.9E+02 0.01 26.2 8.2 16 66-81 9-24 (336)
117 3ri6_A O-acetylhomoserine sulf 20.7 3.2E+02 0.011 26.9 8.8 58 74-131 100-160 (430)
118 3fpc_A NADP-dependent alcohol 20.5 2.1E+02 0.0072 27.1 7.3 76 45-124 139-218 (352)
119 3krt_A Crotonyl COA reductase; 20.4 2.5E+02 0.0086 27.8 8.1 76 45-123 198-279 (456)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=9.5e-67 Score=557.94 Aligned_cols=432 Identities=23% Similarity=0.343 Sum_probs=370.6
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGV 95 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (548)
.+.|+.++|.++++++|+++|+++. ++++||+||.++++++|..|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 20 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Ga 99 (536)
T 3ni2_A 20 KNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGA 99 (536)
T ss_dssp SSCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTC
T ss_pred CCCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCC
Confidence 3589999999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCC
Q psy9226 96 ITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSP 175 (548)
Q Consensus 96 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (548)
+++|+++.++.+++.+++++++++++|++++..+.+........ ..++.++... .....+.++........
T Consensus 100 v~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 170 (536)
T 3ni2_A 100 IITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESD--VKVMCVDSAP-------DGCLHFSELTQADENEA 170 (536)
T ss_dssp EEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHT--CEEEESSCCC-------TTCEETHHHHTSCGGGC
T ss_pred EEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcC--ceEEEecCCC-------CCccCHHHHhhcccccc
Confidence 99999999999999999999999999999987777766554432 3455544321 12233444433222111
Q ss_pred CCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHH----HhCCCCCCEEEEeCCchhHHHHHHHHHHHHHh
Q psy9226 176 PSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAY----QIGFRTKDRFYTPLPLYHTAGGAMCIGQALIF 251 (548)
Q Consensus 176 ~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~ 251 (548)
......++++++|+|||||||.||+|.+||+++++.+..... .+++.++|++++.+|++|.+|+...++.+|..
T Consensus 171 --~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~ 248 (536)
T 3ni2_A 171 --PQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGLRV 248 (536)
T ss_dssp --CCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHHHHH
T ss_pred --ccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHHHhc
Confidence 123457799999999999999999999999999988766543 34578899999999999999987778899999
Q ss_pred ccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEe
Q psy9226 252 GCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGE 329 (548)
Q Consensus 252 G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~ 329 (548)
|+++++.+.+++..+++.|+++++|++.++|+++..|++........+++||.++ |+++++++.+++++.++..++++
T Consensus 249 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~ 328 (536)
T 3ni2_A 249 GAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQ 328 (536)
T ss_dssp TCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCCCCCccc
Confidence 9999999999999999999999999999999999999998877777889999987 89999999999999995557999
Q ss_pred eeecCCCCccccCC--------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCC
Q psy9226 330 FYGATEGNANIANI--------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPS 401 (548)
Q Consensus 330 ~YG~tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~ 401 (548)
.||+||++++++.. ..+.+++|.|++ +++++++|++++.++ +.|+.|||+++
T Consensus 329 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~~~~~~----------~~g~~GEl~v~---- 388 (536)
T 3ni2_A 329 GYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVR------NAEMKIVDPETGASL----------PRNQPGEICIR---- 388 (536)
T ss_dssp EEECGGGSSEEEECGGGSSSCCCCCTTCCCEECS------SCEEEEECTTTCCBC----------CTTCCEEEEEE----
T ss_pred cccccccchhhhcccccCCccccCCCCCeeEeCC------CcEEEEEeCCCCcCC----------CCCCccEEEEe----
Confidence 99999999765421 235566777655 799999998877654 89999999998
Q ss_pred CCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhh
Q psy9226 402 NPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKK 481 (548)
Q Consensus 402 ~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 481 (548)
|+ .++.|||++++ .+...
T Consensus 389 g~-~v~~GY~~~p~-------------------------------------------------------------~t~~~ 406 (536)
T 3ni2_A 389 GD-QIMKGYLNDPE-------------------------------------------------------------ATSRT 406 (536)
T ss_dssp ST-TSCSEETTCHH-------------------------------------------------------------HHHHH
T ss_pred Cc-ccchhhcCChh-------------------------------------------------------------HHHhh
Confidence 67 88999999887 45555
Q ss_pred hhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 482 IVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 482 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
| +.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 407 ~------~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~ 467 (536)
T 3ni2_A 407 I------DKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGL 467 (536)
T ss_dssp B------CTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEE
T ss_pred c------cCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEee
Confidence 4 248899999999999999999999999999999999999999999999999999999974
No 2
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=5.2e-66 Score=553.81 Aligned_cols=443 Identities=18% Similarity=0.283 Sum_probs=360.8
Q ss_pred hhhccccccCcCCCHHHHHHHHHhhCCCceEEEECC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q psy9226 8 FLWAARRVAQKDLTIADIFREHAVRSPNKVIFMFEN--------TEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLEN 79 (548)
Q Consensus 8 ~~~~~~~~~~~~~tl~~~l~~~~~~~p~~~al~~~~--------~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n 79 (548)
|.......+.+..||.++|+++++++|+++|+++.+ +++||+||.++++++|..|++.|+++||+|+++++|
T Consensus 7 ~~~~~p~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~ 86 (549)
T 3g7s_A 7 YKIGFPSLYYPKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPN 86 (549)
T ss_dssp SCCCCCCCCCCCCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCS
T ss_pred eccCCCCCCcCCCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Confidence 333444455568899999999999999999999987 899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCC
Q psy9226 80 RPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVP 159 (548)
Q Consensus 80 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (548)
++++++++|||+++|++++|+++.++.+++.+++++++++++|++++..+.+........ ...++..+..
T Consensus 87 ~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------- 156 (549)
T 3g7s_A 87 SIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTG-VERVFVVGGE--------- 156 (549)
T ss_dssp SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSC-CCEEEEETCS---------
T ss_pred CHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCC-CcEEEEeCCC---------
Confidence 999999999999999999999999999999999999999999999988877777655544 2344444321
Q ss_pred cccccccccccCCCCCCCcccccCC-CCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhH
Q psy9226 160 RSQALSPLLSEVPTSPPSLSYRVGV-QDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHT 238 (548)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 238 (548)
...+.++......... .....+ +++++|+|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|.
T Consensus 157 -~~~~~~~~~~~~~~~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 233 (549)
T 3g7s_A 157 -VNSLSEVMDSGSEDFE--NVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHS 233 (549)
T ss_dssp -SSCHHHHHHHSCSCCC--CCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSH
T ss_pred -CcCHHHHHhcCccccc--cccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHH
Confidence 2334444433222111 122333 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCC--CCccceeeee--cCCCCHHH
Q psy9226 239 AGGAMCIGQALIFGCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPE--DKAHNVRLMF--GNGLRPQI 314 (548)
Q Consensus 239 ~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~--~~l~~Lr~i~--G~~l~~~~ 314 (548)
+++.. ++.++..|+++++.+.+++..+++.|+++++|++.++|+++..|++...... .++++||.++ |+++++++
T Consensus 234 ~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~ 312 (549)
T 3g7s_A 234 AEFGL-VNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPAL 312 (549)
T ss_dssp HHHHH-HTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHH
T ss_pred HHHHH-HHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHH
Confidence 99766 7789999999999999999999999999999999999999999987543332 5678999888 88999999
Q ss_pred HHHHHHh----cCc--ceEEeeeecCCCCccccCCC----CCCCcccccccccCCccceEEEEECCCCCcccccCCCcce
Q psy9226 315 WSEFVDR----FRI--AQIGEFYGATEGNANIANID----NQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCT 384 (548)
Q Consensus 315 ~~~~~~~----~~~--~~i~~~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 384 (548)
.+++.+. ++. .++++.||+||++.+++... .+..++|.|++ ++++.++|++++.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~~g~~~-------- 378 (549)
T 3g7s_A 313 VEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLRLDKSTTQGVPMS------DIELKVISLEDGREL-------- 378 (549)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGGGGGTTSCCEECT------TCEEEEECSSSCCEE--------
T ss_pred HHHHHHHHHhhcCCccccccceEeccccchhhhcCCccccCcCCCccccCC------CCEEEEEeCCCCcCC--------
Confidence 9999988 662 37999999999998766432 34456666554 789999997777654
Q ss_pred ecCCCCceeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCC
Q psy9226 385 RCEPGEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSN 464 (548)
Q Consensus 385 ~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 464 (548)
+.|+.|||+++ |+ .++.|||++++
T Consensus 379 --~~g~~GEl~v~----g~-~v~~GY~~~~~------------------------------------------------- 402 (549)
T 3g7s_A 379 --GVGESGEIVIR----GP-NIFKGYWKREK------------------------------------------------- 402 (549)
T ss_dssp --CTTCCEEEEEE----ST-TSCSEETTCTT-------------------------------------------------
T ss_pred --CCCCceEEEEE----Cc-chhhhhCCChh-------------------------------------------------
Confidence 89999999998 67 89999999987
Q ss_pred CccccccccCcchhhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceee
Q psy9226 465 PARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCV 544 (548)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 544 (548)
++.+.|..+ .++++||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+
T Consensus 403 ------------~t~~~f~~~--~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~ 468 (549)
T 3g7s_A 403 ------------ENQECWWYD--EKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPFELEALLMKHEAVMDVA 468 (549)
T ss_dssp ------------GGGTSEEEC--TTCCEEEEEEEEEEECTTSCEEEEEEC------------CHHHHHHHTTSTTEEEEE
T ss_pred ------------hhhhhhhcc--CCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHHHHHHHHHhCCCeeeEE
Confidence 466655322 134569999999999999999999999999999999999999999999999999999
Q ss_pred EeeC
Q psy9226 545 VYGV 548 (548)
Q Consensus 545 v~g~ 548 (548)
|+|+
T Consensus 469 Vv~~ 472 (549)
T 3g7s_A 469 VIGK 472 (549)
T ss_dssp EECC
T ss_pred EEee
Confidence 9975
No 3
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=4.8e-66 Score=554.22 Aligned_cols=438 Identities=20% Similarity=0.227 Sum_probs=331.3
Q ss_pred CcCCCHHHHHHHHHhhCCCceEEE---EC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q psy9226 17 QKDLTIADIFREHAVRSPNKVIFM---FE--NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLS 91 (548)
Q Consensus 17 ~~~~tl~~~l~~~~~~~p~~~al~---~~--~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~ 91 (548)
....|+.++|.++++++|+++|++ +. ++++||+||.++++++|..|+++|+++||+|+++++|++++++++|||+
T Consensus 17 ~~~~tl~~~l~~~a~~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 96 (550)
T 3rix_A 17 LEDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGAL 96 (550)
T ss_dssp CCCSCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHHHHHH
Confidence 357799999999999999998875 43 6799999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccC
Q psy9226 92 KLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEV 171 (548)
Q Consensus 92 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (548)
++|++++|+++.++.+++.+++++++++++|++++....+.......+....++.++..... .....+.++....
T Consensus 97 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 171 (550)
T 3rix_A 97 FIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDY-----QGFQSMYTFVTSH 171 (550)
T ss_dssp HHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCB-----TTBCBHHHHHHHH
T ss_pred HcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccc-----cCcccHHHHhhcc
Confidence 99999999999999999999999999999999999888888877777766666666543211 1223333333221
Q ss_pred CCC----CC-CcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHH
Q psy9226 172 PTS----PP-SLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAM 243 (548)
Q Consensus 172 ~~~----~~-~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~ 243 (548)
... .. .......++++++|+|||||||.||+|.++|+++...+...... +++.++|++++.+|++|.+|+ +
T Consensus 172 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~ 250 (550)
T 3rix_A 172 LPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGM-F 250 (550)
T ss_dssp CCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHH-H
T ss_pred ccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHH-H
Confidence 110 00 01112235789999999999999999999999999887765544 467889999999999999997 4
Q ss_pred HHHHHHHhccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHh
Q psy9226 244 CIGQALIFGCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDR 321 (548)
Q Consensus 244 ~~~~~L~~G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~ 321 (548)
.++.+|..|+++++.+.+++..+++.|+++++|++.++|+++..|++.......++++||.++ |+++++++.+++.+.
T Consensus 251 ~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~ 330 (550)
T 3rix_A 251 TTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKR 330 (550)
T ss_dssp HHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCCCCHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999988777677789999887 899999999999999
Q ss_pred cCcceEEeeeecCCCCccccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEe
Q psy9226 322 FRIAQIGEFYGATEGNANIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKI 398 (548)
Q Consensus 322 ~~~~~i~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~ 398 (548)
++...+++.||+||+++.++.. ..+.+++|+|++ ++++.++|++++.++ ++|+.|||+++
T Consensus 331 ~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~~~~------~~~~~i~d~~~~~~~----------~~g~~GEl~v~- 393 (550)
T 3rix_A 331 FHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVVP------FFEAKVVDLDTGKTL----------GVNQRGELCVR- 393 (550)
T ss_dssp TTCSCCEEEEECGGGSSEEEECCTTCCCTTEEEEECT------TCEEEEECTTTCCBC----------CTTCCEEEEEE-
T ss_pred cCCCccccccCcCccccceecCCCCCCCCCCcccccC------CcEEEEEeCCCCcCC----------CCCCCeEEEEe-
Confidence 9986699999999999876543 335567777665 689999998777654 88999999998
Q ss_pred cCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchh
Q psy9226 399 VPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDS 478 (548)
Q Consensus 399 ~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 478 (548)
|+ .++.|||++++ .+
T Consensus 394 ---g~-~v~~GY~~~~~-------------------------------------------------------------~t 408 (550)
T 3rix_A 394 ---GP-MIMSGYVNNPE-------------------------------------------------------------AT 408 (550)
T ss_dssp ---ST-TSCSEETTCHH-------------------------------------------------------------HH
T ss_pred ---CC-CcchhhcCChh-------------------------------------------------------------hh
Confidence 67 78999999887 45
Q ss_pred hhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 479 AKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 479 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
...| +.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 409 ~~~~------~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 472 (550)
T 3rix_A 409 NALI------DKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGL 472 (550)
T ss_dssp HHHB------CTTSCEEEEEEEEECTTCCEEEC-------------------------------------
T ss_pred hhhc------CCCCCeecCcEEEEeCCceEEEEecchheeEECCEEECHHHHHHHHHhCCCcceEEEEEe
Confidence 5444 248899999999999999999999999999999999999999999999999999999974
No 4
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=3.5e-65 Score=545.96 Aligned_cols=429 Identities=18% Similarity=0.277 Sum_probs=359.0
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
.+.|+.++|.++++++|+++|+.+.++++||+||.++++++|.+|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~~tl~~~l~~~a~~~p~~~A~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~ 102 (539)
T 1mdb_A 23 AGETFGDLLRDRAAKYGDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALP 102 (539)
T ss_dssp CSCCHHHHHHHHHHHHTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEE
T ss_pred cCCCHHHHHHHHHHHCCCCEEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEeCccch-----HHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCC
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIYGAELT-----DAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVP 172 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (548)
+|+++.++.+++.+++++++++++|++++.. ..........+....++..+... .+.++.....
T Consensus 103 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 171 (539)
T 1mdb_A 103 VFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE-----------EFLPLEDLHT 171 (539)
T ss_dssp EECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT-----------TSEEGGGCCC
T ss_pred ecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCcc-----------chhhhhhccc
Confidence 9999999999999999999999999987532 23333333344333344333211 1222222111
Q ss_pred CCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHH-HHHHHHHh
Q psy9226 173 TSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAM-CIGQALIF 251 (548)
Q Consensus 173 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~~L~~ 251 (548)
.. .......++++++++|||||||.||||.++|+++.+.+......+++.++|++++.+|++|.+++.. .++.+|..
T Consensus 172 ~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~ 249 (539)
T 1mdb_A 172 EP--VKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYA 249 (539)
T ss_dssp CC--CCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHT
T ss_pred cc--cccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHHHHHHHh
Confidence 11 1112456789999999999999999999999999999998888899999999999999999999765 68899999
Q ss_pred ccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEe
Q psy9226 252 GCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGE 329 (548)
Q Consensus 252 G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~ 329 (548)
|+++++.+.+++..+++.|+++++|++.++|+++..|++.......++++||.++ |+++++++.+++.+.++. ++++
T Consensus 250 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~-~~~~ 328 (539)
T 1mdb_A 250 GGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGC-TLQQ 328 (539)
T ss_dssp TCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTCS-EEEE
T ss_pred CCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHhCC-cEEE
Confidence 9999999999999999999999999999999999999876544455788999887 899999999999999987 5999
Q ss_pred eeecCCCCccccCCCC----CCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCcc
Q psy9226 330 FYGATEGNANIANIDN----QPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPAR 405 (548)
Q Consensus 330 ~YG~tE~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~ 405 (548)
.||+||++..+..... ..+++|+|++. ..++.++|+ ++. ++++|+.|||+++ || .
T Consensus 329 ~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~-----~~~~~i~d~-~~~----------~~~~g~~GEl~v~----g~-~ 387 (539)
T 1mdb_A 329 VFGMAEGLVNYTRLDDPEEIIVNTQGKPMSP-----YDESRVWDD-HDR----------DVKPGETGHLLTR----GP-Y 387 (539)
T ss_dssp EEECTTSCEEECCTTSCHHHHHHCCCEESST-----TCEEEEECT-TSC----------BCCTTCCEEEEEE----CT-T
T ss_pred EEcCCCCcccccCCCCcHHhcCCCCCcccCC-----CceEEEECC-CCC----------CCcCCCcceEEee----Cc-c
Confidence 9999997654443221 22456666531 246778874 343 4589999999998 67 7
Q ss_pred ccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhh
Q psy9226 406 AYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTD 485 (548)
Q Consensus 406 ~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (548)
++.|||++++ ++.+.|.
T Consensus 388 v~~GY~~~~~-------------------------------------------------------------~t~~~f~-- 404 (539)
T 1mdb_A 388 TIRGYYKAEE-------------------------------------------------------------HNAASFT-- 404 (539)
T ss_dssp SCSSCTTCHH-------------------------------------------------------------HHHHHBC--
T ss_pred cchhhcCChh-------------------------------------------------------------hhhhhcc--
Confidence 8999999887 4666553
Q ss_pred hhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 486 VFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 486 ~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 405 ----~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 463 (539)
T 1mdb_A 405 ----EDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSM 463 (539)
T ss_dssp ----TTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred ----CCCCeecCceEEECCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCcceEEEEec
Confidence 37899999999999999999999999999999999999999999999999999999974
No 5
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=1.8e-64 Score=544.08 Aligned_cols=438 Identities=25% Similarity=0.356 Sum_probs=363.5
Q ss_pred cCCCHH-HHHHHHHhhCCCceEEEEC-----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q psy9226 18 KDLTIA-DIFREHAVRSPNKVIFMFE-----NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLS 91 (548)
Q Consensus 18 ~~~tl~-~~l~~~~~~~p~~~al~~~-----~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~ 91 (548)
...|+. ++|+++++++|+++|+++. .+++||+||.++++++|.+|+++|+++||+|+++++|++++++++|||+
T Consensus 53 ~~~n~~~~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~ 132 (580)
T 3etc_A 53 ENFNFAYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLH 132 (580)
T ss_dssp SSCCHHHHTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 345555 9999999999999999973 4689999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccch--HHHHHHHhhcCCc-eEEEEeCCCCCCCCCCCCccccccccc
Q psy9226 92 KLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELT--DAVQEISTSLGSN-VKLFSWSPDTDSSSSPVPRSQALSPLL 168 (548)
Q Consensus 92 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (548)
++|++++|+++.++.+++.+++++++++++|++.+.. ..+.......+.. ..++.++... ..+...+.+.+
T Consensus 133 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 206 (580)
T 3etc_A 133 KLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDV------LEGWIDFRKEL 206 (580)
T ss_dssp HHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSC------CTTCEEHHHHH
T ss_pred hCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCcc------ccccccHHHHH
Confidence 9999999999999999999999999999999988754 5666665555543 4455544321 12334444444
Q ss_pred ccCCCCCC--CcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHH
Q psy9226 169 SEVPTSPP--SLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIG 246 (548)
Q Consensus 169 ~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~ 246 (548)
........ .......++++++|+|||||||.||+|.++|.+++..+......+++.+++++++..|++|..++...++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (580)
T 3etc_A 207 EESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGKCVWGKLY 286 (580)
T ss_dssp HHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTHHHHHTTH
T ss_pred hhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHHHHHHHHH
Confidence 33222111 1112457799999999999999999999999999887777666678899999999999999988766678
Q ss_pred HHHHhccEEEEc--CCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhc
Q psy9226 247 QALIFGCCVVIR--KKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRF 322 (548)
Q Consensus 247 ~~L~~G~~~v~~--~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~ 322 (548)
.++..|+++++. ..+++..+++.|+++++|++.++|++++.|++.. ....++++||.++ |+++++++.+++.+.+
T Consensus 287 ~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 365 (580)
T 3etc_A 287 GQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-LSHYNFSTLKYAVVAGEPLNPEVFNRFLEFT 365 (580)
T ss_dssp HHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC-C---CCTTCCEEEECSSCCCHHHHHHHHHHH
T ss_pred HHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc-cccCCCccceEEEEccCCCCHHHHHHHHHHh
Confidence 899999999987 5789999999999999999999999999998763 3445688999887 8999999999999999
Q ss_pred CcceEEeeeecCCCCccccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEec
Q psy9226 323 RIAQIGEFYGATEGNANIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIV 399 (548)
Q Consensus 323 ~~~~i~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~ 399 (548)
+. ++++.||+||++..++.. ..+.+++|+|++ ++++.++|++ +. ++++|+.|||++++.
T Consensus 366 g~-~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~------~~~v~ivd~~-g~----------~~~~g~~GEl~v~~~ 427 (580)
T 3etc_A 366 GI-KLMEGFGQTETVVTIATFPWMEPKPGSIGKPTP------GYKIELMDRD-GR----------LCEVGEEGEIVINTM 427 (580)
T ss_dssp SC-CCEEEECCTTSSCCEECCTTSCCCTTCCBEECT------TCEEEEECTT-SC----------BCCTTCCEEEEEECT
T ss_pred CC-eEecccccccccceeecCCCCCCCCCccccCCC------CCEEEEECCC-CC----------CCCCCCceEEEEecC
Confidence 88 599999999998776543 346677887765 6899999954 44 458999999999843
Q ss_pred CCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhh
Q psy9226 400 PSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSA 479 (548)
Q Consensus 400 ~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 479 (548)
.+.+..++.|||++++ .+.
T Consensus 428 ~g~~~~~~~gY~~~p~-------------------------------------------------------------~t~ 446 (580)
T 3etc_A 428 EGKPVGLFVHYGKDPE-------------------------------------------------------------RTE 446 (580)
T ss_dssp TCCCTTCCCEETTCHH-------------------------------------------------------------HHH
T ss_pred CCCCCeeeccccCCHh-------------------------------------------------------------HHH
Confidence 2222368888998887 465
Q ss_pred hhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 480 KKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 480 ~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+.| .+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 447 ~~f-------~~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V~~a~Vvg~ 508 (580)
T 3etc_A 447 ETW-------HDGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFEVESALIQHPAVLECAITGV 508 (580)
T ss_dssp HHE-------ETTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred hhc-------CCCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCeeeEEEEee
Confidence 555 27899999999999999999999999999999999999999999999999999999974
No 6
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=9.4e-65 Score=543.51 Aligned_cols=433 Identities=20% Similarity=0.240 Sum_probs=364.0
Q ss_pred CCHHH-HHHHHHhhCCCceEEEE--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q psy9226 20 LTIAD-IFREHAVRSPNKVIFMF--ENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVI 96 (548)
Q Consensus 20 ~tl~~-~l~~~~~~~p~~~al~~--~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (548)
.|+.+ ++.++++++ +++|+++ .++++||+||.++++++|..|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 25 ~~l~~~~l~~~~~~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav 103 (548)
T 2d1s_A 25 AGTQLRKYMERYAKL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVG 103 (548)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCE
T ss_pred CcHHHHHHHhhhccc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCE
Confidence 58999 899999999 9999998 4789999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCC
Q psy9226 97 TALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPP 176 (548)
Q Consensus 97 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (548)
++|+++.++.+++.+++++++++++|++++..+.+.......+....++.++.... ..+...+.++.........
T Consensus 104 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 178 (548)
T 2d1s_A 104 VAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVD-----YRGYQCLDTFIKRNTPPGF 178 (548)
T ss_dssp EEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSC-----BTTBCBHHHHHHHTSCTTC
T ss_pred EeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCccc-----ccccccHHHHHhcCccccC
Confidence 99999999999999999999999999999877776665555543455555543210 0112234444433211100
Q ss_pred CcccccC-----C-CCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHH
Q psy9226 177 SLSYRVG-----V-QDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQ 247 (548)
Q Consensus 177 ~~~~~~~-----~-~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~ 247 (548)
...... + +++++|+|||||||.||+|.+||+++.+.+...... +++.++|++++.+|++|.+|+...++.
T Consensus 179 -~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~ 257 (548)
T 2d1s_A 179 -QASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGY 257 (548)
T ss_dssp -CGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHH
T ss_pred -CcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHH
Confidence 001122 3 899999999999999999999999999888776665 678899999999999999998666777
Q ss_pred HHHhccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcc
Q psy9226 248 ALIFGCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIA 325 (548)
Q Consensus 248 ~L~~G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~ 325 (548)
++ .|+++++.+.+++..+++.|+++++|++.++|+++..|.+........+++||.++ |+++++++.+++.+.++..
T Consensus 258 ~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 336 (548)
T 2d1s_A 258 LI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGEAVARRFNLP 336 (548)
T ss_dssp HH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSCCCHHHHHHHHHHTTCS
T ss_pred Hh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCccCCHHHHHHHHHHcCCC
Confidence 77 99999999999999999999999999999999999999987766566788999887 8999999999999999654
Q ss_pred eEEeeeecCCCCccccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCC
Q psy9226 326 QIGEFYGATEGNANIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSN 402 (548)
Q Consensus 326 ~i~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~ 402 (548)
.+++.||+||++..++.. ..+.+++|+|++ ++++.++|++++.++ ++|+.|||+++ |
T Consensus 337 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~~~~~~----------~~g~~GEl~v~----g 396 (548)
T 2d1s_A 337 GVRQGYGLTETTSAIIITPEGDDKPGASGKVVP------LFKAKVIDLDTKKSL----------GPNRRGEVCVK----G 396 (548)
T ss_dssp CCEEEEECGGGSSEEEECCTTCCCTTCCBEECT------TCEEEEECTTTCCBC----------CTTCCEEEEEE----S
T ss_pred ceeeccccccccceeeecCcccCCCCCCCccCC------CceEEEEeCCcCccC----------CCCCCeEEEEC----C
Confidence 699999999998766542 234566777654 688999997777554 88999999998 6
Q ss_pred CccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhh
Q psy9226 403 PARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKI 482 (548)
Q Consensus 403 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 482 (548)
+ .++.|||++++ ++.+.|
T Consensus 397 ~-~v~~GY~~~~~-------------------------------------------------------------~t~~~f 414 (548)
T 2d1s_A 397 P-MLMKGYVNNPE-------------------------------------------------------------ATKELI 414 (548)
T ss_dssp T-TSCSEETTCHH-------------------------------------------------------------HHHHHB
T ss_pred H-HHhhhhcCChH-------------------------------------------------------------Hhhhcc
Confidence 7 78999999887 455554
Q ss_pred hhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 483 VTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 483 ~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
..+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 415 ------~~~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~V~~~ 474 (548)
T 2d1s_A 415 ------DEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAGV 474 (548)
T ss_dssp ------CTTSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCCBCHHHHHHHHHTSTTEEEEEEEEE
T ss_pred ------cCCcEEEccCEEEEcCCCeEEEeccccceEEECCEEECHHHHHHHHHhCCCccEEEEEEE
Confidence 247899999999999999999999999999999999999999999999999999999974
No 7
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=8.7e-65 Score=543.52 Aligned_cols=432 Identities=18% Similarity=0.239 Sum_probs=329.9
Q ss_pred CCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEE
Q psy9226 19 DLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITA 98 (548)
Q Consensus 19 ~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 98 (548)
+.||.++|.++++++|+++|+++.++++||+||.++++++|..|+++|+++||+|+++++|++++++++|||+++|++++
T Consensus 29 ~~tl~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~v 108 (544)
T 3o83_A 29 DQPLTRILTVGVQSHPHSLAIICGERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVL 108 (544)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEE
T ss_pred CCCHHHHHHHHHHhCCCceEEEcCCCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEe
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHhCeeEEEeCccch-----HHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCC
Q psy9226 99 LINHNLRQNSLLHCINIAGVSAFIYGAELT-----DAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPT 173 (548)
Q Consensus 99 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (548)
|+++.++.+++.+++++++++++|++++.. ...............++..+.... ...+.++......
T Consensus 109 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 180 (544)
T 3o83_A 109 NALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQAT--------DFGLLDWIETPAE 180 (544)
T ss_dssp ECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTT--------SEEHHHHHHSCCS
T ss_pred cCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCcc--------ccchhhhhhcccc
Confidence 999999999999999999999999987643 334444444444444554443211 1112222221111
Q ss_pred CCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHH-HHHHHHHhc
Q psy9226 174 SPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAM-CIGQALIFG 252 (548)
Q Consensus 174 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~~L~~G 252 (548)
. ........++++++|+|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|.+++.. .++.+|..|
T Consensus 181 ~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G 259 (544)
T 3o83_A 181 T-FVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPGALGVLHAG 259 (544)
T ss_dssp S-CCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTT
T ss_pred c-ccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecchHHHHHHHHcC
Confidence 1 11112456789999999999999999999999999999999999999999999999999999998764 578899999
Q ss_pred cEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEee
Q psy9226 253 CCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEF 330 (548)
Q Consensus 253 ~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~ 330 (548)
+++++.+.+++..+++.|+++++|++.++|+++..|++........+++||.++ |+++++++.+++.+.++. ++++.
T Consensus 260 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~~~~~ 338 (544)
T 3o83_A 260 GCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVLNC-KLQQV 338 (544)
T ss_dssp CEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHHCS-EEEEE
T ss_pred CEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHhCC-cEEee
Confidence 999999999999999999999999999999999999887766666788999887 899999999999999988 59999
Q ss_pred eecCCCCccccCCCC----CCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccc
Q psy9226 331 YGATEGNANIANIDN----QPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARA 406 (548)
Q Consensus 331 YG~tE~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~ 406 (548)
||+||++..++.... ...++|+|+. .++++.++| +++. ++++|+.|||+++ || .+
T Consensus 339 YG~TE~~~~~~~~~~~~~~~~~~~G~p~~-----~~~~~~i~d-~~~~----------~~~~g~~GEl~v~----g~-~v 397 (544)
T 3o83_A 339 FGMAEGLVNYTRLDDSDEQIFTTQGRPIS-----SDDEIKIVD-EQYR----------EVPEGEIGMLATR----GP-YT 397 (544)
T ss_dssp EECTTSCEEECCTTSCHHHHHHCCCEESC-----TTCEEEEEC-TTSC----------BCCTTCCEEEEEE----CT-TS
T ss_pred eccccccceeecCCCchhhccCCCceecC-----CCcEEEEEC-CCCC----------CCCCCCeeEEEEe----cC-Cc
Confidence 999999866554322 1245566532 257888888 4454 4489999999998 67 78
Q ss_pred cccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhh
Q psy9226 407 YLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDV 486 (548)
Q Consensus 407 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (548)
+.|||++++ .+.+.|
T Consensus 398 ~~GY~~~~~-------------------------------------------------------------~t~~~f---- 412 (544)
T 3o83_A 398 FCGYYQSPE-------------------------------------------------------------HNSQVF---- 412 (544)
T ss_dssp CSCCTTCHH-------------------------------------------------------------HHHHHB----
T ss_pred chhhcCChh-------------------------------------------------------------hhhhhC----
Confidence 899999887 455555
Q ss_pred hccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 487 FEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 487 ~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
..+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 413 --~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 472 (544)
T 3o83_A 413 --DEDNYYYSGDLVQRTPDGNLRVVGRIKDQINRGGEKIASEEIEKLILLHPEVMHAALVAI 472 (544)
T ss_dssp --CTTCCEEEEEEEEECTTSCEEEEEEEC---------------------------------
T ss_pred --CCCCCeEcCCEEEEcCCCCEEEEeecCCEEEeCCEEECHHHHHHHHHhCCCccEEEEEec
Confidence 248899999999999999999999999999999999999999999999999999999974
No 8
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=1.2e-64 Score=537.37 Aligned_cols=421 Identities=24% Similarity=0.325 Sum_probs=356.9
Q ss_pred HHHHHHHhhCCCceEEEE---CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEec
Q psy9226 24 DIFREHAVRSPNKVIFMF---ENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALI 100 (548)
Q Consensus 24 ~~l~~~~~~~p~~~al~~---~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 100 (548)
+++.++++++|++.|+.. .++++||+||.++++++|..|+++|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 4 ~l~~~~a~~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl 83 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPL 83 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHhCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEec
Confidence 468889999999988874 47899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCCccc
Q psy9226 101 NHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPSLSY 180 (548)
Q Consensus 101 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (548)
++.++.+++.+++++++++++|++++..+.+......... .+..++.... ..+.+....... .....
T Consensus 84 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~--~~~~~ 150 (503)
T 4fuq_A 84 NTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGA--TVETLGPDGR---------GSLTDAAAGASE--AFATI 150 (503)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTC--EEEECCTTSC---------SHHHHHHHTSCS--CCCCC
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcCc--eEEEecCCcc---------cccchhhhcCCC--CcCcC
Confidence 9999999999999999999999998766655554444332 3333332210 111111111111 11123
Q ss_pred ccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcCC
Q psy9226 181 RVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRKK 260 (548)
Q Consensus 181 ~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~~ 260 (548)
...++++++|+|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|.+|+...++.++..|+++++.+.
T Consensus 151 ~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~ 230 (503)
T 4fuq_A 151 DRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPK 230 (503)
T ss_dssp CCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSS
T ss_pred CCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCC
Confidence 45679999999999999999999999999999999999999999999999999999999976667789999999999999
Q ss_pred CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeecCCCCc
Q psy9226 261 FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGATEGNA 338 (548)
Q Consensus 261 ~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~ 338 (548)
+++..+++.++ ++|++.++|+++..|++........+++||.++ |+++++++.+++.+.++. ++++.||+||++.
T Consensus 231 ~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~-~~~~~YG~TE~~~ 307 (503)
T 4fuq_A 231 FDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKTGH-AVLERYGMTETNM 307 (503)
T ss_dssp CCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHSC-CEEECCEETTTEE
T ss_pred CCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHhCC-CccceEcccccCc
Confidence 99999999998 899999999999999998877777789999988 788999999999999998 5999999999987
Q ss_pred cccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccccCCcc
Q psy9226 339 NIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYVNEKD 415 (548)
Q Consensus 339 ~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~~~ 415 (548)
.++.. ....+++|+|++ ++++.++|++++.++ ++|+.|||+++ |+ .++.|||++++
T Consensus 308 ~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~~g~~~----------~~g~~GEl~v~----g~-~v~~GY~~~~~ 366 (503)
T 4fuq_A 308 NTSNPYDGDRVPGAVGPALP------GVSARVTDPETGKEL----------PRGDIGMIEVK----GP-NVFKGYWRMPE 366 (503)
T ss_dssp CBCCCSSSCCCTTEEEEBCT------TCEEEEECTTTCCBC----------CTTCCEEEEEE----ST-TSCCCBTTCHH
T ss_pred ccccCCCCCCcCCccccCCC------CeEEEEEECCCCCCC----------cCCCceEEEEE----CC-chhhhhcCChh
Confidence 75532 234566777654 799999998877654 89999999998 67 88999999887
Q ss_pred cccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccCCeeEe
Q psy9226 416 SAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFL 495 (548)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (548)
.+.+.|. .+|||+
T Consensus 367 -------------------------------------------------------------~t~~~f~------~~g~~~ 379 (503)
T 4fuq_A 367 -------------------------------------------------------------KTKSEFR------DDGFFI 379 (503)
T ss_dssp -------------------------------------------------------------HHHHTBC------TTSCEE
T ss_pred -------------------------------------------------------------hhHhhhC------CCCCeE
Confidence 4666552 378999
Q ss_pred eCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 496 SGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 496 TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 380 TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 432 (503)
T 4fuq_A 380 TGDLGKIDERGYVHILGRGKDLVITGGFNVYPKEIESEIDAMPGVVESAVIGV 432 (503)
T ss_dssp EEEEEEECTTCEEEECCSSTTCEEETTEEECHHHHHHHHHTSTTEEEEEEEEE
T ss_pred cceeEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCeeEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999974
No 9
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=7.6e-65 Score=540.63 Aligned_cols=433 Identities=25% Similarity=0.373 Sum_probs=356.0
Q ss_pred hhccccccCcCCCHHHHHHHHHhhCCCceEEEECCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Q psy9226 9 LWAARRVAQKDLTIADIFREHAVRSPNKVIFMFENT--EWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCL 86 (548)
Q Consensus 9 ~~~~~~~~~~~~tl~~~l~~~~~~~p~~~al~~~~~--~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~ 86 (548)
+|......+...||.++|.++++++|+++|+++.++ ++||+||.++++++|..|+++|+++||+|+++++|+++++++
T Consensus 5 ~~~~~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~ 84 (517)
T 3r44_A 5 HHHHVDDDDKMKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCL 84 (517)
T ss_dssp -------CGGGGCHHHHHHHHHHHSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHH
T ss_pred ccccCCCcccccCHHHHHHHHHHhCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHH
Confidence 455555666788999999999999999999999866 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCccccccc
Q psy9226 87 WLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSP 166 (548)
Q Consensus 87 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (548)
+|||+++|++++|+++.++.+++.+++++++++++|++.+....+............++.+. ....+.+
T Consensus 85 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 153 (517)
T 3r44_A 85 FYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWI-----------GADSLAE 153 (517)
T ss_dssp HHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEEE-----------EHHHHHH
T ss_pred HHHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEcc-----------CcccHHH
Confidence 99999999999999999999999999999999999999987777766654433211111100 0011222
Q ss_pred ccccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHH
Q psy9226 167 LLSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIG 246 (548)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~ 246 (548)
........ .......++++++|+|||||||.||+|.+||+++.+.+......+++.++|++++.+|++|.+++...++
T Consensus 154 ~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~ 231 (517)
T 3r44_A 154 RLRSAAAD--EPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIF 231 (517)
T ss_dssp HHHHCCCC--CCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHH
T ss_pred HhhccCcC--CCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHH
Confidence 22221111 1123567799999999999999999999999999999999999999999999999999999999765454
Q ss_pred HHHHhccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCc
Q psy9226 247 QALIFGCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRI 324 (548)
Q Consensus 247 ~~L~~G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~ 324 (548)
++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+.+......+++||.++ |+++++++.+.+.+. +.
T Consensus 232 -~~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~-~~ 309 (517)
T 3r44_A 232 -SAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAK-NI 309 (517)
T ss_dssp -HHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHT-TC
T ss_pred -HHhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhc-CC
Confidence 44599999999999999999999999999999999999999887665556788999888 899999999999887 66
Q ss_pred ceEEeeeecCCCCccccCC-----CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEec
Q psy9226 325 AQIGEFYGATEGNANIANI-----DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIV 399 (548)
Q Consensus 325 ~~i~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~ 399 (548)
++++.||+||+++.++.. ..+.++.|.|.+ ++++.++|++ +. .++.| .|||+++
T Consensus 310 -~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~-~~----------~~~~g-~GEl~v~-- 368 (517)
T 3r44_A 310 -EVVQGYALTESCGGGTLLLSEDALRKAGSAGRATM------FTDVAVRGDD-GV----------IREHG-EGEVVIK-- 368 (517)
T ss_dssp -EEEEEEECGGGTTCEEEECGGGTTTTTTCCBEECT------TEEEEEECTT-SC----------EESSE-EEEEEEE--
T ss_pred -cEEEeecccccccceeecCCccccccCCCCCcCCC------CeEEEEECCC-CC----------CCCCC-CeEEEEe--
Confidence 699999999998765432 345566777654 6888888843 43 33666 8999998
Q ss_pred CCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhh
Q psy9226 400 PSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSA 479 (548)
Q Consensus 400 ~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 479 (548)
|+ .++.|||++++ .+.
T Consensus 369 --g~-~v~~GY~~~p~-------------------------------------------------------------~t~ 384 (517)
T 3r44_A 369 --SD-ILLKEYWNRPE-------------------------------------------------------------ATR 384 (517)
T ss_dssp --ET-TSCSEETTCHH-------------------------------------------------------------HHH
T ss_pred --Cc-chhhhhCCChh-------------------------------------------------------------hhH
Confidence 56 78899999887 466
Q ss_pred hhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 480 KKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 480 ~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+.| .+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 385 ~~f-------~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~Vv~~ 446 (517)
T 3r44_A 385 DAF-------DNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGL 446 (517)
T ss_dssp HTE-------ETTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred hhh-------cCCCEecceeEEEcCCeeEEEecCCcCEEEECCEEECHHHHHHHHHhCCCEeEEEEEec
Confidence 655 27899999999999999999999999999999999999999999999999999999974
No 10
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=2.2e-64 Score=540.09 Aligned_cols=429 Identities=20% Similarity=0.242 Sum_probs=345.5
Q ss_pred CcCCCHHHHHHHHHhhCCCceEEEE----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q psy9226 17 QKDLTIADIFREHAVRSPNKVIFMF----ENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSK 92 (548)
Q Consensus 17 ~~~~tl~~~l~~~~~~~p~~~al~~----~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (548)
..+.|+.++|.++++++|+++|+.+ .++++||+||.+++.++|..|+++|+++||+|+++++|++++++++|||++
T Consensus 15 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 94 (541)
T 1v25_A 15 DEELNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPG 94 (541)
T ss_dssp CCCCCTHHHHHHHHHHSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 3467999999999999999999995 467899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCC
Q psy9226 93 LGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVP 172 (548)
Q Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (548)
+|++++|+++.++.+++.+++++++++++|++++....+.......+....++.++.... .....+.+++....
T Consensus 95 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 168 (541)
T 1v25_A 95 MGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAP------EGYLAYEEALGEEA 168 (541)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCC------TTCEEHHHHCCSCC
T ss_pred cCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCC------cccccHHHHhhccC
Confidence 999999999999999999999999999999999877777666555554445555543221 12233444433221
Q ss_pred CCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHH--HHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHH
Q psy9226 173 TSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGA--IAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALI 250 (548)
Q Consensus 173 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~--~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~ 250 (548)
.. ....++++++|+|||||||.||+|.+||+++...... ....++++++|++++.+|++|.+++. .++.++.
T Consensus 169 ~~-----~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~ 242 (541)
T 1v25_A 169 DP-----VRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWC-LPYAATL 242 (541)
T ss_dssp CC-----CCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHT-HHHHHHH
T ss_pred Cc-----ccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHH-HHHHHHh
Confidence 11 2345689999999999999999999999999877655 23456788999999999999999874 4668999
Q ss_pred hccEEEEcC-CCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceE
Q psy9226 251 FGCCVVIRK-KFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQI 327 (548)
Q Consensus 251 ~G~~~v~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i 327 (548)
.|+++++.+ .+++..+++.|+++++|++.++|+++..|++........+++||.++ |+++++++.+++ +.++. ++
T Consensus 243 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~g~-~~ 320 (541)
T 1v25_A 243 VGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARF-ERMGV-EV 320 (541)
T ss_dssp HTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHH-HHTTC-EE
T ss_pred cCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHH-HHhCC-ce
Confidence 999999987 47999999999999999999999999999875544345678999877 899999999999 66787 69
Q ss_pred EeeeecCCCCccccCCCC--------------CCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCC--CCc
Q psy9226 328 GEFYGATEGNANIANIDN--------------QPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEP--GEP 391 (548)
Q Consensus 328 ~~~YG~tE~~~~~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~~ 391 (548)
++.||+||++..++.... ...++|+|+ .+++++++|++ +.++ +. ++.
T Consensus 321 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~------~~~~~~i~d~~-g~~~----------~~~~~~~ 383 (541)
T 1v25_A 321 RQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPI------PLVRLRVADEE-GRPV----------PKDGKAL 383 (541)
T ss_dssp EEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEEC------TTCEEEEECTT-SCBC----------CSSSCCC
T ss_pred eecccccccccceecccccccccccCccccccccCCCCCcC------CCcEEEEECCC-CCCC----------CCCCCcc
Confidence 999999999977654322 124455554 47899999854 4433 42 368
Q ss_pred eeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCcccccc
Q psy9226 392 GVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLG 471 (548)
Q Consensus 392 Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 471 (548)
|||+++ || .++.|||++++
T Consensus 384 GEl~v~----g~-~v~~GY~~~p~-------------------------------------------------------- 402 (541)
T 1v25_A 384 GEVQLK----GP-WITGGYYGNEE-------------------------------------------------------- 402 (541)
T ss_dssp EEEEEE----ST-TSBSSCBTCHH--------------------------------------------------------
T ss_pred eEEEEe----Cc-chhccccCChh--------------------------------------------------------
Confidence 999998 67 78899999887
Q ss_pred ccCcchhhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 472 YVNEKDSAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
++.+.|. .+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 403 -----~t~~~f~------~~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~ 468 (541)
T 1v25_A 403 -----ATRSALT------PDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVAI 468 (541)
T ss_dssp -----HHHTTBC------TTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHHHHCC----------CEEEE
T ss_pred -----hhhhhcc------CCCCeEcCCEEEEcCCceEEEeecccceeeeCCEEECHHHHHHHHHhCCCceEEEEEEe
Confidence 4555552 37899999999999999999999999999999999999999999999999999999974
No 11
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=4.1e-64 Score=548.69 Aligned_cols=439 Identities=17% Similarity=0.248 Sum_probs=357.4
Q ss_pred CCHHHHHHHHHhhCCCceEEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFE------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKL 93 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~ 93 (548)
+++.++|+++++++|+++|+++. .+++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 76 n~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~ 155 (652)
T 1pg4_A 76 NLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARI 155 (652)
T ss_dssp CHHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 45788999999999999999982 478999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCChhHHHHHHHHhCeeEEEeCccch---------HHHHHHHhhcC--CceEEEEeCCCCCCCCCCCCccc
Q psy9226 94 GVITALINHNLRQNSLLHCINIAGVSAFIYGAELT---------DAVQEISTSLG--SNVKLFSWSPDTDSSSSPVPRSQ 162 (548)
Q Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 162 (548)
|++++|+++.++.+++.+++++++++++|++++.. ..+.+.....+ ....++.++..............
T Consensus 156 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 235 (652)
T 1pg4_A 156 GAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDL 235 (652)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEE
T ss_pred CcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccccCCCce
Confidence 99999999999999999999999999999987532 23444433322 23455555432211111111223
Q ss_pred ccccccccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHH-HHHHHhCCCCCCEEEEeCCchhHHHH
Q psy9226 163 ALSPLLSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGG-AIAYQIGFRTKDRFYTPLPLYHTAGG 241 (548)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~pl~h~~g~ 241 (548)
.|.+++...... .......++++++|+|||||||.||||+++|++++..+. .....+++.++|++++..|++|.+|+
T Consensus 236 ~~~~~~~~~~~~--~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~ 313 (652)
T 1pg4_A 236 WWRDLIEKASPE--HQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGH 313 (652)
T ss_dssp EHHHHHTTSCSC--CCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHH
T ss_pred eHHHHHhhcCCC--CCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeech
Confidence 444544332211 112345679999999999999999999999999887664 45667899999999999999999998
Q ss_pred HHHHHHHHHhccEEEEcCC----CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCC--CCCCCccceeeee--cCCCCHH
Q psy9226 242 AMCIGQALIFGCCVVIRKK----FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPE--KPEDKAHNVRLMF--GNGLRPQ 313 (548)
Q Consensus 242 ~~~~~~~L~~G~~~v~~~~----~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~--G~~l~~~ 313 (548)
.+.++.+|..|+++++.+. +++..+++.|+++++|++.++|++++.|++... ....++++||.++ |++++++
T Consensus 314 ~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~ 393 (652)
T 1pg4_A 314 SYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPE 393 (652)
T ss_dssp HHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHH
T ss_pred HHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHH
Confidence 7778899999999999874 589999999999999999999999999988654 3345689999987 8999999
Q ss_pred HHHHHHHhcC---cceEEeeeecCCCCccccCCC-----CCCCcccccccccCCccceEEEEECCCCCcccccCCCccee
Q psy9226 314 IWSEFVDRFR---IAQIGEFYGATEGNANIANID-----NQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTR 385 (548)
Q Consensus 314 ~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 385 (548)
+++++.+.++ + .+++.||+||+++.++... .+.+++|+|++ ++++.++|+ ++.+
T Consensus 394 ~~~~~~~~~g~~~~-~i~~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~------g~~v~i~d~-~g~~---------- 455 (652)
T 1pg4_A 394 AWEWYWKKIGKEKC-PVVDTWWQTETGGFMITPLPGAIELKAGSATRPFF------GVQPALVDN-EGHP---------- 455 (652)
T ss_dssp HHHHHHHHTTTTCS-CEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCT------TCCEEEECT-TCCB----------
T ss_pred HHHHHHHHhCCCCC-cEEccccCcccccceecCCCCCcCccCCccccCcC------CCeEEEECC-CCCC----------
Confidence 9999999998 5 5999999999997665432 34466666554 788999985 3543
Q ss_pred cCCCCceeEEEEecCCC--CccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCC
Q psy9226 386 CEPGEPGVFIGKIVPSN--PARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPS 463 (548)
Q Consensus 386 ~~~~~~Ge~~~~~~~~~--~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 463 (548)
++.|+.|||+++ | | ++++|||++++
T Consensus 456 v~~g~~GEl~i~----g~~p-~~~~gY~~~~e------------------------------------------------ 482 (652)
T 1pg4_A 456 QEGATEGNLVIT----DSWP-GQARTLFGDHE------------------------------------------------ 482 (652)
T ss_dssp CCSSEEEEEEEC----SCCT-TCCCEETTCHH------------------------------------------------
T ss_pred cCCCceEEEEEc----cCCC-chhhhhcCCHH------------------------------------------------
Confidence 477889999987 5 4 68888888876
Q ss_pred CCccccccccCcchhhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCccee
Q psy9226 464 NPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDC 543 (548)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 543 (548)
.+.+.++. ..+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|
T Consensus 483 -------------~~~~~~~~----~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V~ea 545 (652)
T 1pg4_A 483 -------------RFEQTYFS----TFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEA 545 (652)
T ss_dssp -------------HHHHHHHS----SSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEE
T ss_pred -------------HHHhhhhh----cCCCEEECCcEEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCcceE
Confidence 34444432 2478999999999999999999999999999999999999999999999999999
Q ss_pred eEeeC
Q psy9226 544 VVYGV 548 (548)
Q Consensus 544 ~v~g~ 548 (548)
+|+|+
T Consensus 546 ~Vvg~ 550 (652)
T 1pg4_A 546 AVVGI 550 (652)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99984
No 12
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=7.6e-64 Score=546.88 Aligned_cols=442 Identities=22% Similarity=0.319 Sum_probs=359.9
Q ss_pred CCHHHHHHHHHhhCCCceEEEEC------CeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFE------NTEWTAQQVEAYSNRVANFFL-AQGLKKGDSVALMLENRPEFVCLWLGLSK 92 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~------~~~~Ty~el~~~v~~la~~L~-~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (548)
+++.++|+++++++|+++|+++. .+++||+||.+++.++|+.|+ ++|+++||+|+++++|++++++++|||++
T Consensus 82 n~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~ 161 (663)
T 1ry2_A 82 NACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISR 161 (663)
T ss_dssp CHHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 57889999999999999999982 578999999999999999999 89999999999999999999999999999
Q ss_pred cCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccch---------HHHHHHHhhcCCceEEEEeCCCCC-CCCCCCCccc
Q psy9226 93 LGVITALINHNLRQNSLLHCINIAGVSAFIYGAELT---------DAVQEISTSLGSNVKLFSWSPDTD-SSSSPVPRSQ 162 (548)
Q Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 162 (548)
+|++++|+++.++.+++.+++++++++++|+++... ..+.+.....+...+++.++.... ..........
T Consensus 162 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 241 (663)
T 1ry2_A 162 IGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDL 241 (663)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEE
T ss_pred cCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccccCCCccc
Confidence 999999999999999999999999999999987532 234444443344445665543221 0000111223
Q ss_pred ccccccccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHH-HHHHHhCCCCCCEEEEeCCchhHHHH
Q psy9226 163 ALSPLLSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGG-AIAYQIGFRTKDRFYTPLPLYHTAGG 241 (548)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~pl~h~~g~ 241 (548)
.|.++...... ........++++++|+|||||||.||||+++|++++..+. .....+++.++|++++..|++|++|+
T Consensus 242 ~~~~~~~~~~~--~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~ 319 (663)
T 1ry2_A 242 DWATEKKKYKT--YYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGH 319 (663)
T ss_dssp EHHHHHTTSCS--CCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHH
T ss_pred cHHHHHhhcCC--CCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHhhhh
Confidence 34444432211 1112345679999999999999999999999999887664 45567889999999999999999998
Q ss_pred HHHHHHHHHhccEEEEcCC----CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCC--CCCCCccceeeee--cCCCCHH
Q psy9226 242 AMCIGQALIFGCCVVIRKK----FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPE--KPEDKAHNVRLMF--GNGLRPQ 313 (548)
Q Consensus 242 ~~~~~~~L~~G~~~v~~~~----~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~--G~~l~~~ 313 (548)
.+.++.+|..|+++++.+. +++..+++.|+++++|++.++|++++.|++... ....++++||.++ |++++++
T Consensus 320 ~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~ 399 (663)
T 1ry2_A 320 TYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAE 399 (663)
T ss_dssp HHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHH
T ss_pred HHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCHH
Confidence 7778899999999999864 589999999999999999999999999987654 3345689999988 8999999
Q ss_pred HHHHHHHhcC---cceEEeeeecCCCCccccCC------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcce
Q psy9226 314 IWSEFVDRFR---IAQIGEFYGATEGNANIANI------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCT 384 (548)
Q Consensus 314 ~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 384 (548)
+++++.+.++ + .+++.||+||+++.++.. ..+++++|.|++ ++++.++|++++.++
T Consensus 400 ~~~~~~~~~g~~~~-~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~------g~~v~i~d~~~g~~v-------- 464 (663)
T 1ry2_A 400 VWEWYSEKIGKNEI-PIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFF------GIDAVVLDPNTGEEL-------- 464 (663)
T ss_dssp HHHHHHHTTSCSSS-CEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECT------TCCEEEECSSSTTCE--------
T ss_pred HHHHHHHHhCCCCc-eEEEeECCccccCeeeccCCCCCcccCCCccccCcC------CCeEEEEcCCCCCcC--------
Confidence 9999999998 5 599999999998765432 235567777654 688999997567655
Q ss_pred ecCC-CCceeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCC
Q psy9226 385 RCEP-GEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPS 463 (548)
Q Consensus 385 ~~~~-~~~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 463 (548)
+. |+.|||++++. .| +++.|||++++
T Consensus 465 --~~~g~~Gel~i~g~--~p-~~~~gy~~~~~------------------------------------------------ 491 (663)
T 1ry2_A 465 --NTSHAEGVLAVKAA--WP-SFARTIWKNHD------------------------------------------------ 491 (663)
T ss_dssp --ECSSCEEEEEESSC--CT-TSCCEETTCHH------------------------------------------------
T ss_pred --CCCCcceEEEEecC--CC-chhcccccChH------------------------------------------------
Confidence 55 78999998721 14 67888988876
Q ss_pred CCccccccccCcchhhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCccee
Q psy9226 464 NPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDC 543 (548)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 543 (548)
.+.+.++. ..+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|
T Consensus 492 -------------~~~~~~~~----~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V~ea 554 (663)
T 1ry2_A 492 -------------RYLDTYLN----PYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVAEC 554 (663)
T ss_dssp -------------HHHHHHTS----SSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHHHSSTTEEEE
T ss_pred -------------HHHHhhhc----CCCCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEEcCHHHHHHHHHhCCCcceE
Confidence 34444432 2478999999999999999999999999999999999999999999999999999
Q ss_pred eEeeC
Q psy9226 544 VVYGV 548 (548)
Q Consensus 544 ~v~g~ 548 (548)
+|+|+
T Consensus 555 ~Vvg~ 559 (663)
T 1ry2_A 555 AVVGF 559 (663)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 99985
No 13
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=6.4e-64 Score=532.21 Aligned_cols=421 Identities=23% Similarity=0.288 Sum_probs=347.1
Q ss_pred CCHHHHHHHHHhhCCCceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
+||.++|.++++++|+++|+.+. ++++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 81 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVP 81 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEE
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 58999999999999999999998 8899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEe--CccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccC---C
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIY--GAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEV---P 172 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 172 (548)
+|+++.++.+++.+++++++++++++ +.+..+.+.. .... ..++. ++++.... .
T Consensus 82 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~-~~~~~-----------------~~~~~~~~~~~~ 140 (504)
T 1t5h_X 82 ALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQ---SGSG-ARIIF-----------------LGDLVRDGEPYS 140 (504)
T ss_dssp EEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHH---HCCC-CEEEE-----------------GGGTEETTEECC
T ss_pred EecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhh---cccc-ceeEE-----------------ecchhhcCcccc
Confidence 99999999999999999999999999 6654433311 1111 22222 22222110 0
Q ss_pred CCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCC--CCCCEEEEeCCchhHHHHHHHHHHHHH
Q psy9226 173 TSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGF--RTKDRFYTPLPLYHTAGGAMCIGQALI 250 (548)
Q Consensus 173 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~g~~~~~~~~L~ 250 (548)
...........++++++|+|||||||.||+|.++|+++.+.+......+++ .++|++++.+|++|.+|+...++.+|.
T Consensus 141 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~ 220 (504)
T 1t5h_X 141 YGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALA 220 (504)
T ss_dssp CSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHH
T ss_pred cCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHHH
Confidence 000111124567899999999999999999999999999998888878888 889999999999999998677889999
Q ss_pred hccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCC--CCCCCccceeeee--cCCCCHHHHHHHHHhcCcce
Q psy9226 251 FGCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPE--KPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQ 326 (548)
Q Consensus 251 ~G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~ 326 (548)
.|+++++.+.+++..+++.|+++++|++.++|++++.|++... .....+++||.++ |+++++++.+++.+.++. .
T Consensus 221 ~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~-~ 299 (504)
T 1t5h_X 221 LDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPG-E 299 (504)
T ss_dssp TTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCCS-E
T ss_pred cCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcCc-c
Confidence 9999999999999999999999999999999999999987542 2344678999887 899999999999999987 5
Q ss_pred EEeeeecCCCCccccCCCCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccc
Q psy9226 327 IGEFYGATEGNANIANIDNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARA 406 (548)
Q Consensus 327 i~~~YG~tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~ 406 (548)
+++.||+||++..+.....+.++.|.|.+ ++++.++|++.+. .+.++.|+.|||++++ ++ .+
T Consensus 300 ~~~~YG~TE~~~~~~~~~~~~~~~g~p~~------~~~~~i~~~~~~~--------~~~~~~g~~GEl~v~g---g~-~~ 361 (504)
T 1t5h_X 300 KVNIYGTTEAMNSLYMRQPKTGTEMAPGF------FSEVRIVRIGGGV--------DEIVANGEEGELIVAA---SD-SA 361 (504)
T ss_dssp EEEEEEETTTEEEEEEESCSSSSEEBCCT------TCCEEEECTTSCT--------TCBCCTTCCEEEEEEC---CT-TS
T ss_pred eeeeeccccccccccccCCCCCccccCCC------CCceeEEeccCCC--------CCcCCCCCcceEEEeC---Cc-ee
Confidence 99999999994333333445567777654 5778888855321 1345889999999972 34 78
Q ss_pred cccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhh
Q psy9226 407 YLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDV 486 (548)
Q Consensus 407 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (548)
+.|||++++ ++.+.|
T Consensus 362 ~~GY~~~~~-------------------------------------------------------------~t~~~f---- 376 (504)
T 1t5h_X 362 FVGYLNQPQ-------------------------------------------------------------ATAEKL---- 376 (504)
T ss_dssp CCCBTTCHH-------------------------------------------------------------HHHHHE----
T ss_pred eceecCCch-------------------------------------------------------------hhhhhh----
Confidence 889998887 466555
Q ss_pred hccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 487 FEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 487 ~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 377 ---~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~ 435 (504)
T 1t5h_X 377 ---QDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGVTEVVVIGL 435 (504)
T ss_dssp ---ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred ---cCCccccCcEEEECCCceEEEeCcccCEEEECCEEECHHHHHHHHHhCCCcceEEEEEe
Confidence 26799999999999999999999999999999999999999999999999999999974
No 14
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1.2e-63 Score=536.09 Aligned_cols=416 Identities=20% Similarity=0.233 Sum_probs=345.4
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
...++.++|.++++++|+++|+++.++++||+||.+++.++|..|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 37 ~~~~l~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~ 116 (563)
T 1amu_A 37 RDKTIHQLFEEQVSKRPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAY 116 (563)
T ss_dssp TTCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCcHHHHHHHHHHHCCCCeEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCC
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPS 177 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (548)
+|+++.++.+++.+++++++++++|++++....+.. ......+..++... +. .... ..
T Consensus 117 vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~----~~~~~~~~~~~~~~------------~~---~~~~---~~ 174 (563)
T 1amu_A 117 VPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHN----IQFNGQVEIFEEDT------------IK---IREG---TN 174 (563)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTT----SCCCSEEEECCCST------------TT---TSCC---SC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhh----ccccCceeeecchh------------hc---cccC---cc
Confidence 999999999999999999999999999875543322 11112233222110 00 0000 00
Q ss_pred cccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEE
Q psy9226 178 LSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVI 257 (548)
Q Consensus 178 ~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~ 257 (548)
......++++++|+|||||||.||||.+||+++.+.+......+++.++|++++.+|++|..++ +.++.+|+.|+++++
T Consensus 175 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 253 (563)
T 1amu_A 175 LHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASV-WEMFMALLTGASLYI 253 (563)
T ss_dssp CCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEE
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHH-HHHHHHHHCCCEEEE
Confidence 1123456899999999999999999999999999988888888899999999999999999886 567789999999999
Q ss_pred cCC---CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeee
Q psy9226 258 RKK---FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYG 332 (548)
Q Consensus 258 ~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG 332 (548)
.+. +++..+++.++++++|++.++|+++..|... .+++||.++ |+++++++.+++.+. . .+++.||
T Consensus 254 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------~~~~lr~~~~gG~~l~~~~~~~~~~~--~-~~~~~YG 324 (563)
T 1amu_A 254 ILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------RILSIQTLITAGSATSPSLVNKWKEK--V-TYINAYG 324 (563)
T ss_dssp CCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT------TCCSCSEEEEESSCCCHHHHHHHTTT--S-EEEEEEC
T ss_pred cChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc------ccccccEEEEEEecCCHHHHHHHHhC--C-eEEEEEC
Confidence 875 6899999999999999999999998877532 357888877 899999999999875 4 6999999
Q ss_pred cCCCCccccCCC------CCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccc
Q psy9226 333 ATEGNANIANID------NQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARA 406 (548)
Q Consensus 333 ~tE~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~ 406 (548)
+||++..++... .+..++|+|+ .+++++++|+ ++. +++.|+.|||+++ |+ .+
T Consensus 325 ~TE~~~~~~~~~~~~~~~~~~~~vG~p~------~~~~v~i~d~-~~~----------~~~~g~~GEl~v~----g~-~v 382 (563)
T 1amu_A 325 PTETTICATTWVATKETIGHSVPIGAPI------QNTQIYIVDE-NLQ----------LKSVGEAGELCIG----GE-GL 382 (563)
T ss_dssp CGGGSSCSEEEECCSSCCCSSCCCBEEC------TTEEEEEECT-TSC----------BCCTTCEEEEEEE----ET-TC
T ss_pred cCHHhHhheeeecccccCCCCCccccee------CCCEEEEECC-CcC----------CCCCCCcEEEEEe----ch-hh
Confidence 999987665321 1334556654 4799999984 344 4488999999998 56 78
Q ss_pred cccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhh
Q psy9226 407 YLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDV 486 (548)
Q Consensus 407 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (548)
+.|||++++ ++.+.|..++
T Consensus 383 ~~GY~~~pe-------------------------------------------------------------~t~~~f~~~~ 401 (563)
T 1amu_A 383 ARGYWKRPE-------------------------------------------------------------LTSQKFVDNP 401 (563)
T ss_dssp CCEETTCHH-------------------------------------------------------------HHHHHEEECS
T ss_pred ChhhCCCch-------------------------------------------------------------hhhhhcccCC
Confidence 999999987 5777777666
Q ss_pred hccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 487 FEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 487 ~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+.++++||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 402 ~~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~p~V~~a~Vv~~ 463 (563)
T 1amu_A 402 FVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSVH 463 (563)
T ss_dssp SSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHTTSTTEEEEEEEEE
T ss_pred CCCCCEEEecCCEEEEcCCCeEEEeccccCEEEECCEEeCHHHHHHHHHhCCCcceEEEEEe
Confidence 66678999999999999999999999999999999999999999999999999999999873
No 15
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=2e-63 Score=529.25 Aligned_cols=424 Identities=23% Similarity=0.345 Sum_probs=323.0
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
.+.||.++|.++++++|+++|+++.++++||+||.++++++|.+|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 4 ~~~tl~~~l~~~a~~~pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~ 83 (509)
T 3ivr_A 4 HDFTLADVYRRNAALFPDRTAFMVDGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAIL 83 (509)
T ss_dssp TCCCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEE
T ss_pred CcCCHHHHHHHHHHHCCCceEEEECCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCC
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPS 177 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (548)
+|+++.++.+++.+++++++++++|++.+....+............++.++... ..+.++...... ...
T Consensus 84 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~~ 152 (509)
T 3ivr_A 84 LPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGS----------GPFAPFKDLASD-TPF 152 (509)
T ss_dssp EECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCC----------SSCEEGGGTCCC-SCC
T ss_pred EecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCC----------cChhhHhhccCC-CCC
Confidence 999999999999999999999999999987777565555555555666655421 223333221111 111
Q ss_pred cccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEE
Q psy9226 178 LSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVI 257 (548)
Q Consensus 178 ~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~ 257 (548)
......++++++|+|||||||.||+|.++|+++.+.+.+....+++.++|++++.+|++|.+|+...+ .++..|++.++
T Consensus 153 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~-~~~~~~g~~~~ 231 (509)
T 3ivr_A 153 SAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLML-TLQQAGGASVI 231 (509)
T ss_dssp CCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHH-HHHHHTCEEEE
T ss_pred CcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHH-HHHHhCCcEEE
Confidence 12356779999999999999999999999999999999999999999999999999999999976544 44455555555
Q ss_pred cCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeecCC
Q psy9226 258 RKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGATE 335 (548)
Q Consensus 258 ~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 335 (548)
...+++..+++.|+++++|++.++|+++..|++.. ....+++||.++ |++ +..+.+.+.++..++++.||+||
T Consensus 232 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE 306 (509)
T 3ivr_A 232 AAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APAQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSE 306 (509)
T ss_dssp CSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGG
T ss_pred ecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--cccchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCccc
Confidence 55889999999999999999999999999998766 345678999888 443 88899999995457999999999
Q ss_pred CCccccCC--CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccccCC
Q psy9226 336 GNANIANI--DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYVNE 413 (548)
Q Consensus 336 ~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~ 413 (548)
++++++.. ......+|+|++ ++++.++|++ +. ++++|+.|||+++ |+ .++.|||++
T Consensus 307 ~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~-~~----------~~~~g~~GEl~v~----g~-~~~~gY~~~ 364 (509)
T 3ivr_A 307 TSGLSTFAPYRDRPKSAGRPLF------WRTVAVVDAE-DR----------PLPPGEVGEIVLR----GP-TVFKGYWNN 364 (509)
T ss_dssp GTEEEEEEEGGGSTTSCCEECT------TCEEEEECTT-SC----------BCCTTCCEEEEEE----ST-TSCCEETTC
T ss_pred cccccccCccccCCCcccccCC------CcEEEEECCC-CC----------CCCCCCceEEEEe----cC-CccccccCC
Confidence 99876532 233345677654 6889999854 54 4589999999998 66 789999998
Q ss_pred cccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccCCee
Q psy9226 414 KDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSA 493 (548)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (548)
++ .+...| .+||
T Consensus 365 ~~-------------------------------------------------------------~t~~~f-------~~g~ 376 (509)
T 3ivr_A 365 AA-------------------------------------------------------------ATQHAF-------RNGW 376 (509)
T ss_dssp HH-------------------------------------------------------------HHHHHT-------GGGS
T ss_pred HH-------------------------------------------------------------HhHHHh-------hcCC
Confidence 87 466655 2689
Q ss_pred EeeCCeeeeeccccEEEeccC--CCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 494 FLSGDLLVMDKWGYLYFKDRT--GDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 494 ~~TGD~~~~~~~g~l~i~GR~--~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
|+|||+|++|+||+++|+||. +|+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 377 ~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l~~~p~V~~a~vv~~ 433 (509)
T 3ivr_A 377 HHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAEVEGALKQHPAIADAVVIGV 433 (509)
T ss_dssp EEEEEEEEECTTSCEEEEEEC------------------------------------
T ss_pred cccccEEEECCCceEEEeCCCCcceeEEECCEEECHHHHHHHHHhCCCceeEEEEec
Confidence 999999999999999999999 9999999999999999999999999999999974
No 16
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=1e-63 Score=531.81 Aligned_cols=419 Identities=18% Similarity=0.273 Sum_probs=350.5
Q ss_pred CCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEe
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITAL 99 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 99 (548)
+||.++|+++++++|+++|+++.++++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vp 80 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWRDAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIP 80 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEE
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCCcc
Q psy9226 100 INHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPSLS 179 (548)
Q Consensus 100 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (548)
+++.++.+++.++++++++++++++...... . ....++.. ..+.+.............
T Consensus 81 l~~~~~~~~l~~il~~~~~~~~i~~~~~~~~------~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 138 (512)
T 3fce_A 81 VDLSIPADRVQRIAENSGAKLLLSATAVTVT------D--LPVRIVSE--------------DNLKDIFFTHKGNTPNPE 138 (512)
T ss_dssp EETTSCHHHHHHHHHHSCCCEEEESSCCCSS------C--CSSEEEET--------------HHHHHHHHHTTTCCCCGG
T ss_pred eCCCCcHHHHHHHHHhcCCCEEEecCccccc------c--cccceech--------------hhhhhhcccccccCCCcc
Confidence 9999999999999999999999998542110 0 00111110 011111111111111222
Q ss_pred cccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 180 YRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 180 ~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
....++++++|+|||||||.||+|.+||+++.+.+.+....+++.++|++++.+|++|..++ ..++.++..|+++++.+
T Consensus 139 ~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~ 217 (512)
T 3fce_A 139 HAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSV-MDIYPSLVTGGTLWAID 217 (512)
T ss_dssp GSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGH-HHHHHHHHTTCEEEECC
T ss_pred ccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHH-HHHHHHHhCCCEEEECC
Confidence 34667999999999999999999999999999999999999999999999999999999986 56889999999999987
Q ss_pred C---CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeecC
Q psy9226 260 K---FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGAT 334 (548)
Q Consensus 260 ~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~t 334 (548)
. +++..+++.++++++|++.++|+++..++.........+++||.++ |+++++++.+++.+.++..++++.||+|
T Consensus 218 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~T 297 (512)
T 3fce_A 218 KDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPT 297 (512)
T ss_dssp HHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCG
T ss_pred HHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccC
Confidence 6 6899999999999999999999999999888777777889999887 8999999999999999655799999999
Q ss_pred CCCccccCCC--------CCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccc
Q psy9226 335 EGNANIANID--------NQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARA 406 (548)
Q Consensus 335 E~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~ 406 (548)
|+++.++... .+..++|+|.+ ++++.++|+ ++. ++++|+.|||+++ || .+
T Consensus 298 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~-~g~----------~~~~g~~GEl~v~----g~-~v 355 (512)
T 3fce_A 298 EATVAVTGIHVTEEVLDQYKSLPVGYCKS------DCRLLIMKE-DGT----------IAPDGEKGEIVIV----GP-SV 355 (512)
T ss_dssp GGSSCSEEEECCHHHHHHCSSCCCEEECT------TCEEEEECS-SSC----------BCCTTSCEEEEEE----ST-TS
T ss_pred hhhhheeeEEeccccccccCCCccccccC------CcEEEEECC-CCC----------CCCCCCeEEEEEe----cc-cc
Confidence 9998765321 24455666554 688888884 454 4488999999998 67 88
Q ss_pred cccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhh
Q psy9226 407 YLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDV 486 (548)
Q Consensus 407 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (548)
+.|||++++ .+.+.|..
T Consensus 356 ~~GY~~~~~-------------------------------------------------------------~t~~~f~~-- 372 (512)
T 3fce_A 356 SVGYLGSPE-------------------------------------------------------------LTEKAFTM-- 372 (512)
T ss_dssp CSCBTTCHH-------------------------------------------------------------HHHHHEEE--
T ss_pred ChhhcCCch-------------------------------------------------------------hhhhcccc--
Confidence 999999887 46665532
Q ss_pred hccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 487 FEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 487 ~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.++++||+|||+|++ +||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 373 -~~~~~~~~TGDlg~~-~dG~l~i~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 432 (512)
T 3fce_A 373 -IDGERAYKTGDAGYV-ENGLLFYNGRLDFQIKLHGYRMELEEIEHHLRACSYVEGAVIVPI 432 (512)
T ss_dssp -ETTEEEEEEEEEEEE-ETTEEEEEEEGGGCEEETTEEECHHHHHHHHHHSTTEEEEEEEEE
T ss_pred -CCCCEEEeCCceEEe-cCCEEEEecccCCEEEECCEEECHHHHHHHHHhCCCcceEEEEEE
Confidence 246889999999999 789999999999999999999999999999999999999999964
No 17
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=8.5e-63 Score=530.29 Aligned_cols=432 Identities=21% Similarity=0.271 Sum_probs=357.1
Q ss_pred CCCHHHHHHHHHhh-----CCCceEEEEC-----CeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHH
Q psy9226 19 DLTIADIFREHAVR-----SPNKVIFMFE-----NTEWTAQQVEAYSNRVANFFLAQ-GLKKGDSVALMLENRPEFVCLW 87 (548)
Q Consensus 19 ~~tl~~~l~~~~~~-----~p~~~al~~~-----~~~~Ty~el~~~v~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~ 87 (548)
..++.++|++++++ +|+++|+.+. .+++||+||.++++++|.+|++. |+++||+|+++++|++++++++
T Consensus 37 ~~~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~ 116 (570)
T 3c5e_A 37 FNFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVI 116 (570)
T ss_dssp CCHHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHH
Confidence 34578999999999 9999999973 37899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccc
Q psy9226 88 LGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPL 167 (548)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (548)
|||+++|++++|+++.++.+++.+++++++++++|++++..+.+..+....+....++.++.... .+...+.++
T Consensus 117 lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 190 (570)
T 3c5e_A 117 LGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSC------DGWLNFKKL 190 (570)
T ss_dssp HHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCC------TTSEEHHHH
T ss_pred HHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCc------cccccHHHH
Confidence 99999999999999999999999999999999999998877777666555555445555543210 122334444
Q ss_pred cccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHH--HHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHH
Q psy9226 168 LSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYF--LGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCI 245 (548)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~--~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 245 (548)
+....... ......++++++|+|||||||.||+|.++|+ ++. ..... ..+++.++|++++.+|++|.+++...+
T Consensus 191 ~~~~~~~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~~~~~~ 266 (570)
T 3c5e_A 191 LNEASTTH--HCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGLQASDIMWTISDTGWILNILCSL 266 (570)
T ss_dssp HHHSCSCC--CCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSCCTTCEEEECCCTTSHHHHHHTT
T ss_pred hhcccccc--cccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCCCCCceEEEcCchHHHHHHHHHH
Confidence 43322211 1124567899999999999999999999999 444 33333 567788999999999999999987678
Q ss_pred HHHHHhccEEEEcC--CCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHh
Q psy9226 246 GQALIFGCCVVIRK--KFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDR 321 (548)
Q Consensus 246 ~~~L~~G~~~v~~~--~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~ 321 (548)
+.+|..|+++++.+ .+++..+++.|+++++|++.++|++++.|++.. .....+++||.++ |+++++++.+++.+.
T Consensus 267 ~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~ 345 (570)
T 3c5e_A 267 MEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSSYKFPHLQNCVTVGESLLPETLENWRAQ 345 (570)
T ss_dssp HHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTTCCCTTCCEEEEESSCCCHHHHHHHHHH
T ss_pred HHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-ccccccccceEEEEcCCcCCHHHHHHHHHH
Confidence 89999999999976 689999999999999999999999999998763 3334578999877 899999999999999
Q ss_pred cCcceEEeeeecCCCCccccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEe
Q psy9226 322 FRIAQIGEFYGATEGNANIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKI 398 (548)
Q Consensus 322 ~~~~~i~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~ 398 (548)
++. ++++.||+||++..++.. ..+.+++|+|++ ++++.++|++ +. +++.|+.|||++++
T Consensus 346 ~g~-~i~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~------~~~v~i~d~~-g~----------~~~~G~~GEl~v~~ 407 (570)
T 3c5e_A 346 TGL-DIRESYGQTETGLTCMVSKTMKIKPGYMGTAAS------CYDVQIIDDK-GN----------VLPPGTEGDIGIRV 407 (570)
T ss_dssp HSC-CCEEEEEETTTEEEEECCTTSCCCTTCCCEECT------TCCEEEECTT-SC----------BCCTTCCEEEEEEC
T ss_pred hCC-chhhccchhhcccceecCcccccCCCcccccCC------CceEEEECCC-CC----------CCCCCCCCeeEEec
Confidence 988 599999999998766543 235567777654 6888889854 54 44899999999983
Q ss_pred cCC-CCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcch
Q psy9226 399 VPS-NPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKD 477 (548)
Q Consensus 399 ~~~-~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 477 (548)
..- |+ .++.|||++++ .
T Consensus 408 ~~~~g~-~v~~GY~~~~~-------------------------------------------------------------~ 425 (570)
T 3c5e_A 408 KPIRPI-GIFSGYVDNPD-------------------------------------------------------------K 425 (570)
T ss_dssp SSBCCT-TCCCEETTCHH-------------------------------------------------------------H
T ss_pred cCCCCc-hhhccccCChh-------------------------------------------------------------H
Confidence 221 34 67888888876 4
Q ss_pred hhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 478 SAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+.+.|. ++||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 426 t~~~f~-------~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~a~Vv~~ 489 (570)
T 3c5e_A 426 TAANIR-------GDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISS 489 (570)
T ss_dssp HHHTEE-------TTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHHTSTTEEEEEEEEE
T ss_pred hhhhhc-------CCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEee
Confidence 555542 6899999999999999999999999999999999999999999999999999999974
No 18
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=4.6e-63 Score=536.21 Aligned_cols=414 Identities=17% Similarity=0.166 Sum_probs=346.4
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
...|+.++|+++++++|+++|+.+.++++||+||.++++++|++|++.|+++|++|+++++|++++++++|||+++|+++
T Consensus 25 ~~~tl~~~~~~~a~~~Pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~ 104 (620)
T 4dg8_A 25 AHPTVVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHY 104 (620)
T ss_dssp GSCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEcCCCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCC
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPS 177 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (548)
+|+++.++.+++.+++++++++++++++...... .. ..... +.... ......
T Consensus 105 vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~-------~~-~~~~~-----------------~~~~~---~~~~~~ 156 (620)
T 4dg8_A 105 LYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPA-------NG-LPCVP-----------------VRHLP---AAPASV 156 (620)
T ss_dssp EECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCC-------TT-SCEEE-----------------GGGCC---CCCCCS
T ss_pred EeeCccChHHHHHHHHHhCCCcEEEecCcccccc-------cC-Cceee-----------------eccCC---cCCccc
Confidence 9999999999999999999999999765322100 00 00010 00100 011111
Q ss_pred cccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEE
Q psy9226 178 LSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVI 257 (548)
Q Consensus 178 ~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~ 257 (548)
......++++++|+|||||||.||||+++|+++.+.+.. ...+++.++|++++.+|++|..++ +.++.+|..|+++++
T Consensus 157 ~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 234 (620)
T 4dg8_A 157 ARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAAT-LEIWGALLNGGCCVL 234 (620)
T ss_dssp SCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEE
T ss_pred cCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHH-HHHHHHHhcCCEEEe
Confidence 112356799999999999999999999999999877655 445788999999999999999986 568899999999999
Q ss_pred cC--CCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeec
Q psy9226 258 RK--KFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGA 333 (548)
Q Consensus 258 ~~--~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~ 333 (548)
.+ .+++..+.+.|+++++|++.++|++++.|++.. ...+++||.++ |+++++++.+++.+.++..++++.||+
T Consensus 235 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 311 (620)
T 4dg8_A 235 NDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---PDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGP 311 (620)
T ss_dssp CCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECC
T ss_pred CccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---hhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEch
Confidence 64 579999999999999999999999999998643 24578899887 899999999999888765579999999
Q ss_pred CCCCccccCC-------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccc
Q psy9226 334 TEGNANIANI-------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARA 406 (548)
Q Consensus 334 tE~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~ 406 (548)
||++..++.. .....++|+|+ .+++++++|++.... +++|+.|||+++ |+ .+
T Consensus 312 TE~~~~~~~~~~~~~~~~~~~~~iG~p~------~~~~~~i~d~~~~~~----------~~~g~~GEl~i~----G~-~v 370 (620)
T 4dg8_A 312 TENTTFTCCHVVTDDDLEEDDIPIGKAI------AGTAVLLLDEHGQEI----------AEPDRAGEIVAF----GA-GL 370 (620)
T ss_dssp GGGCSCSEEEECCTGGGGSSSCCCBEEC------TTEEEEEECTTSCBC----------CSSSCCEEEEEE----ET-TC
T ss_pred hhhhhheEEEeccccccCCCCCCceecc------cCcEEEEECccCCCC----------CCCCCceEEEEe----cc-cc
Confidence 9999776532 12334556654 479999999654422 478999999998 56 89
Q ss_pred cccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhh
Q psy9226 407 YLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDV 486 (548)
Q Consensus 407 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (548)
++|||++++ .+.+.|..++
T Consensus 371 ~~GY~~~p~-------------------------------------------------------------~t~~~f~~~p 389 (620)
T 4dg8_A 371 AQGYRNDAA-------------------------------------------------------------RTRASFVELP 389 (620)
T ss_dssp CSEETTCHH-------------------------------------------------------------HHHHHEEEEE
T ss_pred ccccCCChh-------------------------------------------------------------hhhhhhccCC
Confidence 999999988 6888887665
Q ss_pred hccCC--eeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEee
Q psy9226 487 FEIGD--SAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYG 547 (548)
Q Consensus 487 ~~~~~--~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g 547 (548)
+. +. +||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+|+|++
T Consensus 390 ~~-~~~~~~yrTGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~~eIE~~l~~~p~V~~a~Vv~ 451 (620)
T 4dg8_A 390 YR-GRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLV 451 (620)
T ss_dssp ET-TEEEEEEEEEEEEEECTTSCEEEEECSSSEEEETTEEEEHHHHHHHHHTSTTEEEEEEEE
T ss_pred CC-CCCceEEeCCCEEEECCCCeEEEEccCCCEEEECCEEcCHHHHHHHHHhCCCccEEEEEE
Confidence 32 23 89999999999999999999999999999999999999999999999999999987
No 19
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=2.9e-63 Score=534.71 Aligned_cols=417 Identities=21% Similarity=0.261 Sum_probs=313.3
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
...+|.++|+++++++|+++|+++.++++||+||.++++++|.+|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus 73 ~~~~l~~~l~~~a~~~pd~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 152 (570)
T 4gr5_A 73 AGACVHELFEAQAARAPDAVALLHEADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGY 152 (570)
T ss_dssp CSCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCHHHHHHHHHHHCCCCeEEECCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCC
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPS 177 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (548)
+|+++.++.+++.+++++++++++|++++.... ......+...+... .. .....
T Consensus 153 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~-----------------~~--~~~~~ 206 (570)
T 4gr5_A 153 TMLDPQFPVERLALSLEDTGAPLLVTSRPLSGR-------LTGTTTLYVEDEAA-----------------SD--APAGN 206 (570)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECTTTTTS-------SCSSEEEECCC--------------------------CCC
T ss_pred EEcCCCChHHHHHHHHHhcCCCEEEecchhhhc-------ccCCcceeeecccc-----------------cc--ccccc
Confidence 999999999999999999999999998754321 11111221111100 00 00111
Q ss_pred cccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEE
Q psy9226 178 LSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVI 257 (548)
Q Consensus 178 ~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~ 257 (548)
......++++++|+|||||||.||||+++|+++.+.+.. ...+++.++|++++.+|++|..+. +.++.+|..|+++++
T Consensus 207 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 284 (570)
T 4gr5_A 207 LATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARCVL 284 (570)
T ss_dssp CCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEEEE
T ss_pred cCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEEEE
Confidence 122456799999999999999999999999999766554 334578899999999999987654 567889999999999
Q ss_pred cC--CCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeec
Q psy9226 258 RK--KFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGA 333 (548)
Q Consensus 258 ~~--~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~ 333 (548)
.+ .+++..+++.|+++++|++.++|+++..|++... ..+++||.++ |+++++++.+++.+.++..++++.||+
T Consensus 285 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~ 361 (570)
T 4gr5_A 285 QSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP---EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGP 361 (570)
T ss_dssp CSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECC
T ss_pred cCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch---hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeech
Confidence 76 5799999999999999999999999999986543 3578899888 899999999999999865579999999
Q ss_pred CCCCccccCC-------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccc
Q psy9226 334 TEGNANIANI-------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARA 406 (548)
Q Consensus 334 tE~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~ 406 (548)
||+++.++.. .....++|+|++ +++++++|++ +. +++.|+.|||+++ |+ .+
T Consensus 362 TE~~~~~~~~~~~~~~~~~~~~~iG~p~~------~~~v~i~d~~-~~----------~~~~G~~GEl~v~----g~-~v 419 (570)
T 4gr5_A 362 AESMGFTTHHAVVAGDLSGTALPIGVPLA------GKRAYVLDDD-LK----------PAANGALGELYVA----GA-GL 419 (570)
T ss_dssp GGGCSCSEEEECCGGGTTSSSCCCBEECT------TEEEEEECTT-SC----------BCCTTCEEEEEEE----ET-TC
T ss_pred hhheeeeeeeeecccccCCCccccceeeC------CCEEEEECCC-CC----------CCCCCCcEEEEEe----ec-cc
Confidence 9998766532 122334566554 7999999843 54 4488999999998 66 88
Q ss_pred cccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhh
Q psy9226 407 YLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDV 486 (548)
Q Consensus 407 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (548)
+.|||++++ ++.+.|..++
T Consensus 420 ~~GY~~~~~-------------------------------------------------------------~t~~~f~~~~ 438 (570)
T 4gr5_A 420 AHGYVSRPA-------------------------------------------------------------LTAERFVADP 438 (570)
T ss_dssp CCEETTCHH-------------------------------------------------------------HHHHHEEECT
T ss_pred chhcCCCch-------------------------------------------------------------hhhcccccCC
Confidence 999999987 5777776554
Q ss_pred hc--cCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 487 FE--IGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 487 ~~--~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+. +++|||+|||+|++|+||+++|+||+||+||++|++|+|.|||++|.+||.|.+|+|+|+
T Consensus 439 ~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~ 502 (570)
T 4gr5_A 439 FAGPGGERMYRTGDLARRRADGVLEYVGRADDQVKIRGFRVEPGEVEARLVGHPAVRQAAVLAQ 502 (570)
T ss_dssp TCCSSCCEEEEEEEEEEECTTSCEEEEEC-----------------------------------
T ss_pred CCCCCCCEEEeCCCeEEECCCCeEEEEcccCCEEEECcEEeCHHHHHHHHhcCCCcceEEEEEe
Confidence 43 346899999999999999999999999999999999999999999999999999999974
No 20
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.6e-62 Score=524.67 Aligned_cols=431 Identities=20% Similarity=0.256 Sum_probs=344.0
Q ss_pred CCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEe
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITAL 99 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 99 (548)
.++.+++.++++ +|+++|+++.++++||+||.++++++|..|++.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~l~~~~~-~p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vp 102 (529)
T 2v7b_A 24 NFAAYLFRLNET-RAGKTAYIDDTGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVV 102 (529)
T ss_dssp CHHHHHHHHTGG-GTTSEEEECSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEE
T ss_pred eHHHHHHHhhhc-cCCceEEEeCCCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEe
Confidence 358999999999 9999999998999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCc-eEEEEeCCCCCCCCCCCCcccccccccccCCCCCCCc
Q psy9226 100 INHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSN-VKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPSL 178 (548)
Q Consensus 100 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (548)
+++.++.+++.+++++++++++|++++..+.+.......... ..++.++..... ......++++....... ..
T Consensus 103 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~ 176 (529)
T 2v7b_A 103 ANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESE----PRLAPLFEELIDAAAPA--AK 176 (529)
T ss_dssp CCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC----------CCCBHHHHHHTSCCC--SS
T ss_pred cCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccc----cccccchhhhhccCCCc--cc
Confidence 999999999999999999999999988776665554333222 334443322100 00111333433321111 11
Q ss_pred ccccCCCCeEEEEEecCCCCCcceEEEechHH-HHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEE
Q psy9226 179 SYRVGVQDKLIYIYTSGTTGLPKAAVISNHRY-YFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVI 257 (548)
Q Consensus 179 ~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l-~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~ 257 (548)
.....++++++++|||||||.||+|.+||+++ ..........+++.++|++++.+|++|.+|+...++.+|..|+++++
T Consensus 177 ~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 256 (529)
T 2v7b_A 177 AAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAIL 256 (529)
T ss_dssp CCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEEC
T ss_pred ccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEE
Confidence 22456789999999999999999999999999 55555444456788999999999999999987777789999999998
Q ss_pred c-CCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeecC
Q psy9226 258 R-KKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGAT 334 (548)
Q Consensus 258 ~-~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~t 334 (548)
. +.+++..+++.|+++++|++.++|+++..+++..........+||.++ |+++++++.+++.+.++. ++++.||+|
T Consensus 257 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~g~-~i~~~YG~T 335 (529)
T 2v7b_A 257 MAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHFGC-EILDGIGST 335 (529)
T ss_dssp CCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHHHHHHHHHHHSC-CEEEEEECT
T ss_pred ecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHHHHHHHHHHhCC-ceeeeEchh
Confidence 7 678999999999999999999999999999887654433234788877 899999999999999988 599999999
Q ss_pred CCCccccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCcccccccc
Q psy9226 335 EGNANIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYV 411 (548)
Q Consensus 335 E~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~ 411 (548)
|++.+++.. ..+.+++|+|++ ++++.++|+ ++++ +++|+.|||+++ |+ .++.|||
T Consensus 336 E~~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~-~g~~----------~~~g~~GEl~v~----g~-~~~~gY~ 393 (529)
T 2v7b_A 336 EMLHIFLSNRAGAVEYGTTGRPVP------GYEIELRDE-AGHA----------VPDGEVGDLYIK----GP-SAAVMYW 393 (529)
T ss_dssp TTSSEEEECCTTCCCTTSCCEECT------TCEEEEECT-TSCB----------CCTTSCEEEEEE----CT-TCCCCBT
T ss_pred hcCceeeccccCCCccCCcccCCC------CCEEEEECC-CCCC----------CCCCCccEEEEe----cC-CcccccC
Confidence 997654432 234566777654 688999984 4544 488999999998 66 7889999
Q ss_pred CCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccCC
Q psy9226 412 NEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGD 491 (548)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (548)
++++ .+...|. +
T Consensus 394 ~~~~-------------------------------------------------------------~t~~~f~-------~ 405 (529)
T 2v7b_A 394 NNRE-------------------------------------------------------------KSRATFL-------G 405 (529)
T ss_dssp TCHH-------------------------------------------------------------HHHHHEE-------T
T ss_pred CChH-------------------------------------------------------------HHHHhhh-------c
Confidence 9887 4555552 6
Q ss_pred eeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 492 SAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 492 ~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 406 ~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv~~ 462 (529)
T 2v7b_A 406 EWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVEVEMVLVQHDAVLEAAVVGV 462 (529)
T ss_dssp TEEEEEEEEEECTTSCEEEEEEGGGCBC----CBCHHHHHHHHTTSTTEEEEEEEEE
T ss_pred CCcccCceEEECCCccEEEeCccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEEe
Confidence 799999999999999999999999999999999999999999999999999999974
No 21
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=3.2e-62 Score=520.04 Aligned_cols=417 Identities=20% Similarity=0.252 Sum_probs=353.0
Q ss_pred CCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEE
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQ-GLKKGDSVALMLENRPEFVCLWLGLSKLGVITA 98 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 98 (548)
+||.++|+++++++|+++|+.+.++++||+||.++++++|.+|.+. |.++|++|+++++|++++++++|||+++|++++
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 80 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQGQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYI 80 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEE
T ss_pred CcHHHHHHHHHHHCCCCeEEEcCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEE
Confidence 5899999999999999999999999999999999999999999885 888999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCCCc
Q psy9226 99 LINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPPSL 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (548)
|+++.++.+++.+++++++++++|++...... ..... .....+.++....... ...
T Consensus 81 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~------~~~~~-----------------~~~~~~~~~~~~~~~~-~~~ 136 (511)
T 3e7w_A 81 PVDLSIPSERIAKIIESSGAELLIHAAGLSID------AVGQQ-----------------IQTVSAEELLENEGGS-VSQ 136 (511)
T ss_dssp EEETTSCHHHHHHHHHHHTCCEEEESSSCCTT------CCCCS-----------------SCEEEHHHHHTSCSCC-CCG
T ss_pred ecCCCChHHHHHHHHHhCCCCEEEecccccch------hcccc-----------------cceecHhhhhccccCC-ccc
Confidence 99999999999999999999999997542110 00000 0112222222221111 111
Q ss_pred ccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 179 SYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 179 ~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
.....++++++|+|||||||.||+|.+||+++.+.+.+....+++.++|++++.+|++|..++ +.++.+|..|+++++.
T Consensus 137 ~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~ 215 (511)
T 3e7w_A 137 DQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSV-MDLYPCLQSGGTLHCV 215 (511)
T ss_dssp GGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHH-HHHHHHHHTTCEEEEC
T ss_pred cccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHH-HHHHHHHhcCCEEEEc
Confidence 234567899999999999999999999999999999999999999999999999999999986 5688999999999998
Q ss_pred CC---CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeec
Q psy9226 259 KK---FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGA 333 (548)
Q Consensus 259 ~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~ 333 (548)
+. +++..+++.++++++|++.++|+++..+++.+......++++|.++ |+++++++.+++.+.++..++++.||+
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~ 295 (511)
T 3e7w_A 216 TKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGP 295 (511)
T ss_dssp CHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCC
T ss_pred ChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCccc
Confidence 75 6899999999999999999999999999988877777789999887 899999999999999955579999999
Q ss_pred CCCCccccCC--------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCcc
Q psy9226 334 TEGNANIANI--------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPAR 405 (548)
Q Consensus 334 tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~ 405 (548)
||+++.++.. .....++|.|.+ ++++.++|++ +. ++++|+.|||+++ |+ .
T Consensus 296 TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~-g~----------~~~~g~~GEl~v~----g~-~ 353 (511)
T 3e7w_A 296 TEATVAVTSVEITNDVISRSESLPVGFAKP------DMNIFIMDEE-GQ----------PLPEGEKGEIVIA----GP-S 353 (511)
T ss_dssp GGGSSCSEEEEECHHHHTTCSSCCCBEECT------TCEEEEECTT-SC----------BCCTTCCEEEEEE----ST-T
T ss_pred chheeeeeEEeccccccccCCcCCCcceeC------CCEEEEECCC-CC----------CCCCCCceEEEEe----cC-c
Confidence 9998876532 223445666554 7899999854 54 4489999999998 67 8
Q ss_pred ccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhh
Q psy9226 406 AYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTD 485 (548)
Q Consensus 406 ~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (548)
++.|||++++ .+.+.|+..
T Consensus 354 v~~GY~~~~~-------------------------------------------------------------~t~~~f~~~ 372 (511)
T 3e7w_A 354 VSRGYLGEPE-------------------------------------------------------------LTEKAFFSH 372 (511)
T ss_dssp SCCCBTTCHH-------------------------------------------------------------HHHHHEEES
T ss_pred cChhhCCCcc-------------------------------------------------------------cchhhhcCC
Confidence 9999999887 566666432
Q ss_pred hhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 486 VFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 486 ~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
++.+||+|||+|++ +||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 373 ---~g~~~~~TGDlg~~-~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 431 (511)
T 3e7w_A 373 ---EGQWAYRTGDAGFI-QDGQIFCQGRLDFQIKLHGYRMELEEIEFHVRQSQYVRSAVVIPY 431 (511)
T ss_dssp ---SSSEEEEEEEEEEE-ETTEEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEE
T ss_pred ---CCCEEEeCCCeEEc-cCCeEEEEccccCEEEECCEEeCHHHHHHHHHhCCCcceEEEEEE
Confidence 34558999999999 589999999999999999999999999999999999999999974
No 22
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=1.3e-62 Score=524.68 Aligned_cols=418 Identities=19% Similarity=0.239 Sum_probs=345.0
Q ss_pred CCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEE
Q psy9226 19 DLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITA 98 (548)
Q Consensus 19 ~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 98 (548)
..|+.++|+++++++|+++|+.+.++++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 3 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~v 82 (521)
T 3l8c_A 3 LKDMIDSIEQFAQTQADFPVYDCLGERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYI 82 (521)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHCCCCcceecCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCccccccccccc-CCCCCCC
Q psy9226 99 LINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSE-VPTSPPS 177 (548)
Q Consensus 99 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 177 (548)
|+++.++.+++.+++++++++++|++++....+. ...++. +.++... ....+..
T Consensus 83 pl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~--------~~~~~~-----------------~~~~~~~~~~~~~~~ 137 (521)
T 3l8c_A 83 PVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIE--------GISLVS-----------------LSEIESAKLAEMPYE 137 (521)
T ss_dssp EEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCT--------TSEEEE-----------------HHHHHHHHHHTCCCC
T ss_pred ecCccccHHHHHHHHHhCCCCEEEecCccccccc--------cCcccc-----------------hhhhhhcccccCCcc
Confidence 9999999999999999999999999875321110 011111 1111100 0001111
Q ss_pred cccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH--hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEE
Q psy9226 178 LSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ--IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCV 255 (548)
Q Consensus 178 ~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~ 255 (548)
......++++++|+|||||||.||+|.+||+++.+.+.+.... +++..++++++..|++|..++ ..++.++..|+++
T Consensus 138 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~ 216 (521)
T 3l8c_A 138 RTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSV-MYWAPTLALGGTL 216 (521)
T ss_dssp CSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGH-HHHHHHHHTTCEE
T ss_pred cCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHH-HHHHHHHhcCCEE
Confidence 1234567999999999999999999999999999888776665 677899999999999999885 5577899999999
Q ss_pred EEcCCC---CHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEee
Q psy9226 256 VIRKKF---SASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEF 330 (548)
Q Consensus 256 v~~~~~---~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~ 330 (548)
++.+.. ++..+++.+.++++|++.++|+++..++.........+++||.++ |+++++++.+++.+.++..++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~ 296 (521)
T 3l8c_A 217 FALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINA 296 (521)
T ss_dssp EECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEE
T ss_pred EEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHCCCceEEeC
Confidence 998754 899999999999999999999999999887776667789999887 899999999999999955579999
Q ss_pred eecCCCCccccCC--------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCC
Q psy9226 331 YGATEGNANIANI--------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSN 402 (548)
Q Consensus 331 YG~tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~ 402 (548)
||+||+++.++.. .....++|+|.+ +++++++|++ +. ++++|+.|||+++ |
T Consensus 297 YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~------~~~~~i~d~~-g~----------~~~~g~~GEl~v~----g 355 (521)
T 3l8c_A 297 YGPTEATVALSAIEITREMVDNYTRLPIGYPKP------DSPTYIIDED-GK----------ELSSGEQGEIIVT----G 355 (521)
T ss_dssp ECCGGGSSCSEEEEECHHHHHHCSSCEEEEECT------TSCEEEECTT-SC----------BCCTTCCEEEEEE----S
T ss_pred cCccHHhhhhceeecccccccCCCccccccccC------CCEEEEECCC-cC----------CCCCCCceEEEec----c
Confidence 9999998876532 124456777665 6888899843 54 4488999999998 6
Q ss_pred CccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhh
Q psy9226 403 PARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKI 482 (548)
Q Consensus 403 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 482 (548)
| .++.|||++++ ++.+.|
T Consensus 356 ~-~v~~GY~~~~~-------------------------------------------------------------~t~~~f 373 (521)
T 3l8c_A 356 P-AVSKGYLNNPE-------------------------------------------------------------KTAEAF 373 (521)
T ss_dssp T-TSCSCBTTCHH-------------------------------------------------------------HHHHHE
T ss_pred c-ccChhhcCCch-------------------------------------------------------------HhhccC
Confidence 7 89999999887 566666
Q ss_pred hhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 483 VTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 483 ~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
... ++++||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 374 ~~~---~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~ 436 (521)
T 3l8c_A 374 FTF---KGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELEDVSQQLNQSPMVASAVAVPR 436 (521)
T ss_dssp EEE---TTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHHHHHHHHTSTTEEEEEEECC
T ss_pred cCC---CCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHHHHHHHHcCCCcceEEEEEe
Confidence 431 468899999999999999999999999999999999999999999999999999999874
No 23
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=7.9e-62 Score=528.20 Aligned_cols=429 Identities=18% Similarity=0.267 Sum_probs=357.7
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVIT 97 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (548)
++.||.++|.++++ ||++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 25 ~~~~l~~~~~~~a~--pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~~ 102 (617)
T 3rg2_A 25 QDLPLTDILTRHAA--SDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAP 102 (617)
T ss_dssp CCCCTTHHHHTTTT--CCSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEE
T ss_pred CcCCHHHHHHHhhC--CCCeEEecCCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeEE
Confidence 47899999999987 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHhCeeEEEeCccch-----HHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCC
Q psy9226 98 ALINHNLRQNSLLHCINIAGVSAFIYGAELT-----DAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVP 172 (548)
Q Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (548)
+|+++..+.+++.++++++++++++++.+.. ...............+...+... ...+.+......
T Consensus 103 vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 173 (617)
T 3rg2_A 103 VLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSG---------EHNLQDAINHPA 173 (617)
T ss_dssp EEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCS---------TTBHHHHHHSCC
T ss_pred ccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeeccccc---------ccchhhhhcccc
Confidence 9999999999999999999999999987643 33334444444434444433221 112222222111
Q ss_pred CCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHH-HHHHHHHh
Q psy9226 173 TSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAM-CIGQALIF 251 (548)
Q Consensus 173 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~~L~~ 251 (548)
.. .......++++++|+|||||||.||||+++|+++.+.+......+++.++|++++.+|++|.+++.. .++.+|..
T Consensus 174 ~~--~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~ 251 (617)
T 3rg2_A 174 ED--FTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLA 251 (617)
T ss_dssp SS--CCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHH
T ss_pred cc--cCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhHHHHHHHHHc
Confidence 11 1112456789999999999999999999999999999999999999999999999999999998754 67899999
Q ss_pred ccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCC--CCCCccceeeee--cCCCCHHHHHHHHHhcCcceE
Q psy9226 252 GCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEK--PEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQI 327 (548)
Q Consensus 252 G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i 327 (548)
|+++++.+..++..++..++++++|++.++|+++..|++.... ....+++||.++ |+++++++.+++.+.++. ++
T Consensus 252 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~-~~ 330 (617)
T 3rg2_A 252 GGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGC-QL 330 (617)
T ss_dssp TCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHHHHHHTCS-EE
T ss_pred CCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHHHHHHhCC-cE
Confidence 9999999999999999999999999999999999998764322 223678999887 899999999999999988 69
Q ss_pred EeeeecCCCCccccCCCCC----CCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCC
Q psy9226 328 GEFYGATEGNANIANIDNQ----PGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNP 403 (548)
Q Consensus 328 ~~~YG~tE~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~ 403 (548)
++.||+||++..++..... ..+.|.|.. .+.+++++|+ ++. +++.|+.|||+++ |+
T Consensus 331 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~-----~~~~~~i~d~-~~~----------~~p~G~~GEl~i~----G~ 390 (617)
T 3rg2_A 331 QQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMC-----PDDEVWVADA-EGN----------PLPQGEVGRLMTR----GP 390 (617)
T ss_dssp EEEEEETTEEEEECCTTSCHHHHHHCCCEESC-----TTCEEEEECT-TSC----------BCCTTCCEEEEEE----CS
T ss_pred EEEeccCcceeecccCCCcccccccCCCccCC-----CCceEEEECC-CCC----------CCCCCCceEEEec----Cc
Confidence 9999999998766543322 134455431 2568888884 444 4589999999998 67
Q ss_pred ccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhh
Q psy9226 404 ARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIV 483 (548)
Q Consensus 404 ~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (548)
.+++|||++++ .+.+.|.
T Consensus 391 -~v~~GY~~~p~-------------------------------------------------------------~t~~~f~ 408 (617)
T 3rg2_A 391 -YTFRGYYKSPQ-------------------------------------------------------------HNASAFD 408 (617)
T ss_dssp -SSCSCCTTCHH-------------------------------------------------------------HHHHHBC
T ss_pred -cccchhcCChh-------------------------------------------------------------hhhhccC
Confidence 78999999988 5776663
Q ss_pred hhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 484 TDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 484 ~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.++||+|||+|++++||.++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+++
T Consensus 409 ------~~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~~p~V~~a~vv~~ 467 (617)
T 3rg2_A 409 ------ANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSM 467 (617)
T ss_dssp ------TTSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHHHHHHHTTSTTEEEEEEEEE
T ss_pred ------CCCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCeeEEEEEec
Confidence 47899999999999999999999999999999999999999999999999999999863
No 24
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1.2e-62 Score=561.46 Aligned_cols=438 Identities=21% Similarity=0.294 Sum_probs=340.0
Q ss_pred CCCHHHHHHHHHhhCCCceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q psy9226 19 DLTIADIFREHAVRSPNKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVI 96 (548)
Q Consensus 19 ~~tl~~~l~~~~~~~p~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (548)
..||.++|.++++++|+++|+++. ++++||+||.++++++|..|+++|+++||+|+++++|++++++++|||+++|++
T Consensus 60 ~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~ 139 (979)
T 3tsy_A 60 HLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGAT 139 (979)
T ss_dssp TSCHHHHHTTTGGGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCE
Confidence 579999999999999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCC-C
Q psy9226 97 TALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTS-P 175 (548)
Q Consensus 97 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 175 (548)
++|++|.++.+++.+++++++++++|++++..+.+....... ...++.++.... .........+.++....... .
T Consensus 140 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 215 (979)
T 3tsy_A 140 ATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD--GVVIVCIDDNES--VPIPEGCLRFTELTQSTTEASE 215 (979)
T ss_dssp EEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTS--CCEEEECCCCTT--SCCCTTEEEGGGTSSCCSGGGG
T ss_pred EEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcC--CceEEEeCCccc--ccCCcccccHHHHhhccccccc
Confidence 999999999999999999999999999988766665554432 234455443211 11112334444444332211 1
Q ss_pred CCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHH----HhCCCCCCEEEEeCCchhHHHHHHHHHHHHHh
Q psy9226 176 PSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAY----QIGFRTKDRFYTPLPLYHTAGGAMCIGQALIF 251 (548)
Q Consensus 176 ~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~ 251 (548)
........++++++|+|||||||.||+|.++|+++.+.+..... .+++.++|++++.+|++|.+++...++.+|..
T Consensus 216 ~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~ 295 (979)
T 3tsy_A 216 VIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRV 295 (979)
T ss_dssp GSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHH
T ss_pred cCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhc
Confidence 11223567899999999999999999999999999988776543 34578899999999999999987778899999
Q ss_pred ccEEEEcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEe
Q psy9226 252 GCCVVIRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGE 329 (548)
Q Consensus 252 G~~~v~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~ 329 (548)
|+++++.+.+++..+++.|+++++|++.++|+++..|++.......++++||.++ |+++++++.+++.+.++..++++
T Consensus 296 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~ 375 (979)
T 3tsy_A 296 GAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQ 375 (979)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEEE
T ss_pred CcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEEe
Confidence 9999999999999999999999999999999999999988777677789999988 88999999999999996557999
Q ss_pred eeecCCCCccccCC--------CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCC
Q psy9226 330 FYGATEGNANIANI--------DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPS 401 (548)
Q Consensus 330 ~YG~tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~ 401 (548)
.||+||++.+++.. ..+.+++|.|++ +++++++|++++.++ ++|+.|||+++
T Consensus 376 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~~~~~~----------~~g~~GEl~i~---- 435 (979)
T 3tsy_A 376 GYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVR------NAEMKIVDPDTGDSL----------SRNQPGEICIR---- 435 (979)
T ss_dssp CEECGGGCSEEEECGGGSSSCCCCCTTCCCEECS------SCEEEEECTTSCCBC----------CTTCCEEEEEE----
T ss_pred eechhhhhHHHHhCCCCCCCccccCCCCcCcccC------CcEEEEEeCCCCCCC----------CCCCccEEEEE----
Confidence 99999999765421 234566777654 799999998877655 88999999998
Q ss_pred CCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhh
Q psy9226 402 NPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKK 481 (548)
Q Consensus 402 ~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 481 (548)
|+ .++.|||++++ .+.+.
T Consensus 436 g~-~v~~GY~~~p~-------------------------------------------------------------~t~~~ 453 (979)
T 3tsy_A 436 GH-QIMKGYLNNPA-------------------------------------------------------------ATAET 453 (979)
T ss_dssp ST-TSCSEETTCHH-------------------------------------------------------------HHHHH
T ss_pred CC-CccccccCChh-------------------------------------------------------------hhhhh
Confidence 67 88999999887 46555
Q ss_pred hhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 482 IVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 482 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
| ..+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 454 f------~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~p~V~~~~Vv~~ 514 (979)
T 3tsy_A 454 I------DKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAM 514 (979)
T ss_dssp B------CTTSCEEEEEEEEECTTSCEEEEEESCC--------------------------------
T ss_pred c------cCCCcEEcCCEEEEcCCceEEEecCCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEEe
Confidence 5 248899999999999999999999999999999999999999999999999999999974
No 25
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.2e-62 Score=515.90 Aligned_cols=421 Identities=19% Similarity=0.227 Sum_probs=334.7
Q ss_pred CCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEe
Q psy9226 20 LTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITAL 99 (548)
Q Consensus 20 ~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 99 (548)
+||.++|.++++++|+++|+++.++++||+||.+++.++|..|++. +||+|+++++|++++++++|||+++|++++|
T Consensus 1 mtl~~~l~~~a~~~pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vp 77 (501)
T 3ipl_A 1 MSLDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIAM 77 (501)
T ss_dssp --CCCHHHHHHHHHTTSEEEECSSCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHhcCCceEEEeCCcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe
Confidence 4678899999999999999999999999999999999999999986 8999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCccccccccccc---CCCCCC
Q psy9226 100 INHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSE---VPTSPP 176 (548)
Q Consensus 100 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 176 (548)
+++.++.+++.+++++++++++|++.+.......... ............... .........+...... ......
T Consensus 78 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (501)
T 3ipl_A 78 INTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVS-LDDIEFAGRDITTNG--LLDNTMGIQYDTSNETVVPKESPSN 154 (501)
T ss_dssp CCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEE-TTC----------------------------------CCHHH
T ss_pred cCccCCHHHHHHHHHhcCCCEEEEccccccccccccc-cccceeeeeeccccc--ccccccccccccchhhccccCCccc
Confidence 9999999999999999999999998764322110000 000000000000000 0000000000000000 000000
Q ss_pred CcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEE
Q psy9226 177 SLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVV 256 (548)
Q Consensus 177 ~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v 256 (548)
.......++++++|+|||||||.||+|.+||+++.+.+......+++.++|++++.+|++|.+|+.. ++.++..|++++
T Consensus 155 ~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~~ 233 (501)
T 3ipl_A 155 ILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSV-LLRAVIEGFTVR 233 (501)
T ss_dssp HTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHHH-HHHHHHHTCEEE
T ss_pred ccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHHH-HHHHHHcCceEE
Confidence 1112456799999999999999999999999999999999999999999999999999999999755 778999999999
Q ss_pred EcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeecC
Q psy9226 257 IRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGAT 334 (548)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~t 334 (548)
+.+.+++..+++.|+++++|++.++|++++.|++...... .+||.++ |+++++++.+.+.+ ++. ++++.||+|
T Consensus 234 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~lr~i~~gG~~l~~~~~~~~~~-~~~-~~~~~YG~T 308 (501)
T 3ipl_A 234 IVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP---YNLQKILLGGAKLSATMIETALQ-YNL-PIYNSFGMT 308 (501)
T ss_dssp ECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC---TTCCEEEECSSCCCHHHHHHHHH-TTC-CEEEEEEEG
T ss_pred eCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc---CcccEEEEeCCCCCHHHHHHHHH-hCC-CEecccccc
Confidence 9999999999999999999999999999999987665433 2788777 89999999999987 577 599999999
Q ss_pred CCCccccCC-----CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCcccccc
Q psy9226 335 EGNANIANI-----DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLG 409 (548)
Q Consensus 335 E~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~g 409 (548)
|+++.++.. ..+.+++|.|++ ++++.++|++ +++.|||+++ |+ .++.|
T Consensus 309 E~~~~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~----------------~~~~GEl~v~----g~-~~~~g 361 (501)
T 3ipl_A 309 ETCSQFLTATPEMLHARPDTVGMPSA------NVDVKIKNPN----------------KEGHGELMIK----GA-NVMNG 361 (501)
T ss_dssp GGTEEEEEECHHHHHHCTTCCBEECT------TCEEEEESCC----------------SSCCEEEEEE----ST-TSCSC
T ss_pred ccccceeecCccccccCCCCCCCCCC------CcEEEEecCC----------------CCCccEEEEe----cc-chhhh
Confidence 998755432 235567777665 6889898864 3467999998 66 78999
Q ss_pred ccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhcc
Q psy9226 410 YVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEI 489 (548)
Q Consensus 410 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (548)
||++++ .+.. |
T Consensus 362 Y~~~~~-------------------------------------------------------------~t~~-~------- 372 (501)
T 3ipl_A 362 YLYPTD-------------------------------------------------------------LTGT-F------- 372 (501)
T ss_dssp CSBSTT-------------------------------------------------------------CCCS-E-------
T ss_pred hCcChh-------------------------------------------------------------hcch-h-------
Confidence 999887 2322 2
Q ss_pred CCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 490 GDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 490 ~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 373 ~~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eiE~~l~~~p~V~~~~vv~~ 431 (501)
T 3ipl_A 373 ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGH 431 (501)
T ss_dssp ETTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred cCCceecCCEEEEcCCCeEEEEccccceEEECCEEECHHHHHHHHHhCCCccEEEEEEE
Confidence 27899999999999999999999999999999999999999999999999999999974
No 26
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=9.2e-62 Score=526.08 Aligned_cols=430 Identities=18% Similarity=0.211 Sum_probs=347.3
Q ss_pred CcCCCHHHHHHHHHhhCCCceEEEEC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q psy9226 17 QKDLTIADIFREHAVRSPNKVIFMFE----NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSK 92 (548)
Q Consensus 17 ~~~~tl~~~l~~~~~~~p~~~al~~~----~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (548)
.+..||.++|.++++++|+++|+++. ++++||+||.+++.++|..|++.|+++||+|+++++|++++++++|||++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 87 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLY 87 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Confidence 35789999999999999999999874 58999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCC---ChhHHHHHHHHhCeeEEEeCccchHHHHHHH-hhcCCceEEEEeCCCCCCCCCCCCccccccccc
Q psy9226 93 LGVITALINHNL---RQNSLLHCINIAGVSAFIYGAELTDAVQEIS-TSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLL 168 (548)
Q Consensus 93 ~G~~~v~l~~~~---~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (548)
+|++++|+++.. +.+++.++++.+++++++++.+....+.... ...+....+..+ ..+++.
T Consensus 88 ~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 152 (590)
T 3kxw_A 88 AGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAI---------------ALESIE 152 (590)
T ss_dssp TTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEEEE---------------EGGGCC
T ss_pred hCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhccccccccee---------------echhcc
Confidence 999999999987 4578899999999999999987555443221 111110001110 011111
Q ss_pred ccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHH
Q psy9226 169 SEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQA 248 (548)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 248 (548)
.... .........++++++|+|||||||.||||.+||+++.+.+.+....+++.++|++++.+|++|.+|+...++.+
T Consensus 153 ~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~ 230 (590)
T 3kxw_A 153 LNRS--SSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILTP 230 (590)
T ss_dssp GGGG--GGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHHH
T ss_pred cccc--ccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHHH
Confidence 0000 00111245678999999999999999999999999999999999999999999999999999999987668899
Q ss_pred HHhccEEEEcCCC----CHHHHHHHHhhcCccEEEecHHHHHHHhcC---CCCCCCCccceeeee--cCCCCHHHHHHHH
Q psy9226 249 LIFGCCVVIRKKF----SASNYFSDVCKYKCTVGQYIGEMCRYLLST---PEKPEDKAHNVRLMF--GNGLRPQIWSEFV 319 (548)
Q Consensus 249 L~~G~~~v~~~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~---~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~ 319 (548)
|+.|+++++.+.+ ++..+++.|+++++|++.++|.++..+++. ......++++||.++ |+++++++.+++.
T Consensus 231 l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~ 310 (590)
T 3kxw_A 231 IYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHFY 310 (590)
T ss_dssp HHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHHH
T ss_pred HhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHHH
Confidence 9999999998865 899999999999999999999999988764 333345688999888 8999999999999
Q ss_pred HhcCc-----ceEEeeeecCCCCccccCCCC------------------------------CCCcccccccccCCccceE
Q psy9226 320 DRFRI-----AQIGEFYGATEGNANIANIDN------------------------------QPGAIGFVSRLIPTIYPIS 364 (548)
Q Consensus 320 ~~~~~-----~~i~~~YG~tE~~~~~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~ 364 (548)
+.++. .++++.||+||+++.++.... ...++|.|++ +
T Consensus 311 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~------~-- 382 (590)
T 3kxw_A 311 QAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQ------E-- 382 (590)
T ss_dssp HHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESS------E--
T ss_pred HHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCC------C--
Confidence 98842 259999999999987653211 1133444432 3
Q ss_pred EEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCccccc
Q psy9226 365 IIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNK 444 (548)
Q Consensus 365 ~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (548)
+.++|++++.++ ++|+.|||+++ || .++.|||++++
T Consensus 383 v~i~d~~~~~~~----------~~g~~GEl~v~----g~-~v~~GY~~~p~----------------------------- 418 (590)
T 3kxw_A 383 VKIIDPDTLIPC----------DFDQVGEIWVQ----SN-SVAKGYWNQPE----------------------------- 418 (590)
T ss_dssp EEEECTTTCCBC----------CTTBCEEEEEE----ST-TSCCCBTTCHH-----------------------------
T ss_pred eEEEcCCCCcCC----------CCCCEEEEEEe----CC-cccccccCChh-----------------------------
Confidence 667887766544 88999999998 67 78999999887
Q ss_pred CCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhcc--CCeeEeeCCeeeeeccccEEEeccCCCceeccC
Q psy9226 445 KGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEI--GDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKG 522 (548)
Q Consensus 445 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G 522 (548)
++.+.|...+... +++||+|||+|++| +|.|+|+||.||+||++|
T Consensus 419 --------------------------------~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~l~~~GR~dd~Ik~~G 465 (590)
T 3kxw_A 419 --------------------------------ETRHAFAGKIKDDERSAIYLRTGDLGFLH-ENELYVTGRIKDLIIIYG 465 (590)
T ss_dssp --------------------------------HHHHHHCBCCTTC---CCBEEEEEEEEEE-TTEEEEEEESSCHHHHHH
T ss_pred --------------------------------HHHHHHhccccCCCCCCcEEecCcEEEEE-CCEEEEEcCccceEEECC
Confidence 5666665433332 23499999999999 899999999999999999
Q ss_pred cccchhhHHHHh-hcccCcc--eeeEeeC
Q psy9226 523 ENVSTCEVEGVV-SNASEYR--DCVVYGV 548 (548)
Q Consensus 523 ~~v~~~~iE~~l-~~~~~v~--~~~v~g~ 548 (548)
++|+|.|||++| ..+|.|. +|+|+++
T Consensus 466 ~~v~p~eIE~~l~~~~~~v~~~~~~v~~~ 494 (590)
T 3kxw_A 466 KNHYPQDIEFSLMHSPLHHVLGKCAAFVI 494 (590)
T ss_dssp HTTHHHHHHHHHHHSGGGGGEEEEEEEEE
T ss_pred EecCHHHHHHHHHhcCccccCccEEEEEe
Confidence 999999999999 7899998 8998874
No 27
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=3.5e-60 Score=512.36 Aligned_cols=432 Identities=20% Similarity=0.197 Sum_probs=348.8
Q ss_pred cccccCcCCCHHHHHHHHHhhCCCceEEEEC---CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Q psy9226 12 ARRVAQKDLTIADIFREHAVRSPNKVIFMFE---NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWL 88 (548)
Q Consensus 12 ~~~~~~~~~tl~~~l~~~~~~~p~~~al~~~---~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (548)
.........||.++|+++++++|+.+++... ++++||+||.+++.++|..|+++|+++||+|+++++|++++++++|
T Consensus 13 ~~~~~~~~~tl~~~l~~~a~~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 92 (576)
T 3gqw_A 13 LPMRYADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFF 92 (576)
T ss_dssp -CCCCSCCSSHHHHHHHHTTSSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCcccCCCCcHHHHHHHHhhCCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 3444556779999999999999999888654 4799999999999999999999999999999999999999999999
Q ss_pred HHHHcCcEEEecCCCCC-------hhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcc
Q psy9226 89 GLSKLGVITALINHNLR-------QNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRS 161 (548)
Q Consensus 89 A~~~~G~~~v~l~~~~~-------~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (548)
||+++|++++|+++.++ .+++.++++.+++++++++++....+.......+.. .++..
T Consensus 93 A~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~-------------- 157 (576)
T 3gqw_A 93 ACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPEL-HVLSH-------------- 157 (576)
T ss_dssp HHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTC-EEEEH--------------
T ss_pred HHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcc-eecch--------------
Confidence 99999999999999998 789999999999999999998777776655443322 11110
Q ss_pred cccccccccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH-hCCCCCCEEEEeCCchhHHH
Q psy9226 162 QALSPLLSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ-IGFRTKDRFYTPLPLYHTAG 240 (548)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g 240 (548)
.+.+.... .........++++++|+|||||||.||+|.++|+++.+.+...... +++.++|++++.+|++|.+|
T Consensus 158 -~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 232 (576)
T 3gqw_A 158 -AWFKALPE----ADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMG 232 (576)
T ss_dssp -HHHHTSCC----CCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCTTCCEEECCCTTSHHH
T ss_pred -hhhhcccc----cccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCCcceEEEcCCcccccc
Confidence 00000000 0111124467899999999999999999999999999988876655 78999999999999999999
Q ss_pred HHHHHHHHHHhccEEEEcCC----CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCC---CCCCCccceeeee--cCCCC
Q psy9226 241 GAMCIGQALIFGCCVVIRKK----FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPE---KPEDKAHNVRLMF--GNGLR 311 (548)
Q Consensus 241 ~~~~~~~~L~~G~~~v~~~~----~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~---~~~~~l~~Lr~i~--G~~l~ 311 (548)
+...++.++..|+++++.+. +++..+++.|+++++|++.++|+++..+.+... ....++++||.++ |++++
T Consensus 233 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~ 312 (576)
T 3gqw_A 233 LVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPIS 312 (576)
T ss_dssp HHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSCCC
T ss_pred HHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCccCC
Confidence 87778889999999998764 589999999999999999999999988765432 2334578999887 89999
Q ss_pred HHHHHHHHHhcC-----cceEEeeeecCCCCccccCCCCCC---------------------C----cccccccccCCcc
Q psy9226 312 PQIWSEFVDRFR-----IAQIGEFYGATEGNANIANIDNQP---------------------G----AIGFVSRLIPTIY 361 (548)
Q Consensus 312 ~~~~~~~~~~~~-----~~~i~~~YG~tE~~~~~~~~~~~~---------------------~----~~g~~~~~~~~~~ 361 (548)
+++.+++.+.++ ..++++.||+||+++.++...... + ....+.+.+.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~ 392 (576)
T 3gqw_A 313 AEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALP 392 (576)
T ss_dssp HHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECT
T ss_pred HHHHHHHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCC
Confidence 999999999883 336999999999998776432111 0 0001112333344
Q ss_pred ceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcc
Q psy9226 362 PISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTT 441 (548)
Q Consensus 362 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (548)
++++.++| +++.+ +++|+.|||+++ |+ .+++|||++++
T Consensus 393 ~~~~~i~d-~~g~~----------~~~g~~GEl~v~----g~-~~~~gY~~~~~-------------------------- 430 (576)
T 3gqw_A 393 EHGIEIRN-EAGMP----------VAERVVGHICIS----GP-SLMSGYFGDQV-------------------------- 430 (576)
T ss_dssp TCEEEEEC-TTSCB----------CCTTBCEEEEEE----ST-TSCCCBTTCHH--------------------------
T ss_pred CCeEEEEC-CCCCC----------CCCCCeEEEEEe----Cc-cccccccCCcc--------------------------
Confidence 78888888 45544 488999999998 66 78889998876
Q ss_pred cccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceecc
Q psy9226 442 YNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWK 521 (548)
Q Consensus 442 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~ 521 (548)
....++ .+|||+|||+|++ +||+++|+||.||+||++
T Consensus 431 ------------------------------------~~~~~~------~~g~~~TGDl~~~-~dG~l~~~GR~dd~ik~~ 467 (576)
T 3gqw_A 431 ------------------------------------SQDEIA------ATGWLDTGDLGYL-LDGYLYVTGRIKDLIIIR 467 (576)
T ss_dssp ------------------------------------HHHHHH------HHSCEEEEEEEEE-ETTEEEEEEETTTCEEET
T ss_pred ------------------------------------cccccc------CCCeeeccceEEE-ECCEEEEEecCcceEEEC
Confidence 333332 3789999999999 789999999999999999
Q ss_pred CcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 522 GENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 522 G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
|++|+|.|||++|.+||.|.+++|+++
T Consensus 468 G~~v~p~eIE~~l~~~p~V~~~~vv~~ 494 (576)
T 3gqw_A 468 GRNIWPQDIEYIAEQEPEIHSGDAIAF 494 (576)
T ss_dssp TEEECHHHHHHHHTTSSSCCTTSEEEE
T ss_pred CEEECHHHHHHHHHhCcccccccEEEE
Confidence 999999999999999999999988863
No 28
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=1.8e-60 Score=505.23 Aligned_cols=410 Identities=20% Similarity=0.219 Sum_probs=334.2
Q ss_pred cCCCHHHHHHHHHhhCCC-ceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q psy9226 18 KDLTIADIFREHAVRSPN-KVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVI 96 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~-~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (548)
+..++.+.|.++++++|+ ++|+++.++++||+||.+++.++|..|. .|++|+++++|++++++++|||+++|++
T Consensus 20 ~~~tl~~~l~~~a~~~p~d~~Al~~~~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga~ 94 (505)
T 3nyq_A 20 HMSSLFPALSPAPTGAPADRPALRFGERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGVA 94 (505)
T ss_dssp ----CCTTTSSCCCSGGGGSEEEEETTEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTCC
T ss_pred ccchhHHHHHHHHHhCCCCCeEEEECCeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 356889999999999997 9999999999999999999999998875 3889999999999999999999999999
Q ss_pred EEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccccCCCCCC
Q psy9226 97 TALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLSEVPTSPP 176 (548)
Q Consensus 97 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (548)
++|+++.++.+++.+++++++++++|++++... ...... ...+..+.. ....
T Consensus 95 ~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~-----~~~~~~-~~~~~~~~~----------------------~~~~ 146 (505)
T 3nyq_A 95 AVPLNPKSGDKELAHILSDSAPSLVLAPPDAEL-----PPALGA-LERVDVDVR----------------------ARGA 146 (505)
T ss_dssp EEEECTTCCHHHHHHHHHHHCCSEEEECTTCCC-----CGGGTT-SEEEECCTT----------------------CCCC
T ss_pred EEEcCCCCCHHHHHHHHHHCCCCEEEECCcccc-----chhhcc-ccccccccc----------------------cccC
Confidence 999999999999999999999999999865210 000111 111111110 0000
Q ss_pred CcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEE
Q psy9226 177 SLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVV 256 (548)
Q Consensus 177 ~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v 256 (548)
.......++++++|+|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|..|+...++.+|..|++++
T Consensus 147 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (505)
T 3nyq_A 147 VPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVR 226 (505)
T ss_dssp CCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEE
T ss_pred CCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEE
Confidence 11124567899999999999999999999999999999999999999999999999999999998878889999999999
Q ss_pred EcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCC---CCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeee
Q psy9226 257 IRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKP---EDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFY 331 (548)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~---~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~Y 331 (548)
+.+.+++..+++.+ ++++|+++++|+++..|++..... ...++++|.++ |+++++++.+++.+.++. ++++.|
T Consensus 227 ~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~-~~~~~Y 304 (505)
T 3nyq_A 227 HLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAATGR-RVIERY 304 (505)
T ss_dssp ECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHHSC-CCEEEE
T ss_pred ECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhcCC-eeeccc
Confidence 99999999999999 889999999999999997632211 23467888887 888999999999999988 599999
Q ss_pred ecCCCCccccCC---CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccc
Q psy9226 332 GATEGNANIANI---DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYL 408 (548)
Q Consensus 332 G~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~ 408 (548)
|+||+++.++.. ..+.+++|+|++ ++++.++|++ +.++ ..++.|+.|||+++ |+ .++.
T Consensus 305 G~TE~~~~~~~~~~~~~~~~~vG~p~~------~~~~~i~d~~-g~~~-------~~~~~g~~GEl~v~----g~-~v~~ 365 (505)
T 3nyq_A 305 GMTETLMNTSVRADGEPRAGTVGVPLP------GVELRLVEED-GTPI-------AALDGESVGEIQVR----GP-NLFT 365 (505)
T ss_dssp EETTTEEEEECCTTSCCCTTCCCEECT------TCEEEEC------CC-------CCCCSCCCEEEEEE----ST-TSCC
T ss_pred chhhcccccccCCCCCCCCCCcccCCC------CCEEEEECCC-CCCc-------ccCCCCceEEEEEe----cC-chhh
Confidence 999998766543 234466777654 6889998854 4443 11233789999998 66 7899
Q ss_pred cccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhc
Q psy9226 409 GYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFE 488 (548)
Q Consensus 409 gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (548)
|||++++ ++.+.|.
T Consensus 366 GY~~~~~-------------------------------------------------------------~t~~~f~----- 379 (505)
T 3nyq_A 366 EYLNRPD-------------------------------------------------------------ATAAAFT----- 379 (505)
T ss_dssp EETTCHH-------------------------------------------------------------HHHHTBC-----
T ss_pred hhCCChh-------------------------------------------------------------Hhhhhhc-----
Confidence 9999887 4666653
Q ss_pred cCCeeEeeCCeeeeeccccEEEeccC-CCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 489 IGDSAFLSGDLLVMDKWGYLYFKDRT-GDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 489 ~~~~~~~TGD~~~~~~~g~l~i~GR~-~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.++||+|||+|++|+||+++|+||. ||+||++|++|+|.|||++|.++|.|.+|+|+|+
T Consensus 380 -~~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~~p~V~~a~Vv~~ 439 (505)
T 3nyq_A 380 -EDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHPEVREAAVTGE 439 (505)
T ss_dssp -TTSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred -CCCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHHHHHHHHHCcCccEEEEEee
Confidence 3789999999999999999999997 5999999999999999999999999999999974
No 29
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=2.1e-59 Score=547.88 Aligned_cols=428 Identities=18% Similarity=0.217 Sum_probs=356.3
Q ss_pred hccccccCcCCCHHHHHHHHHhhCCCceEEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy9226 10 WAARRVAQKDLTIADIFREHAVRSPNKVIFMFENTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLG 89 (548)
Q Consensus 10 ~~~~~~~~~~~tl~~~l~~~~~~~p~~~al~~~~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA 89 (548)
|+......+..++.++|+++++++|+++|+++.++++||+||.++++++|+.|++.|+++|++|++++++++++++++||
T Consensus 454 ~~~~~~~~~~~~l~~~~~~~~~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 533 (1304)
T 2vsq_A 454 LNPPAQAHETKPLTYWFKEAVNANPDAPALTYSGQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILG 533 (1304)
T ss_dssp TSCCCCCCCCCCHHHHHHHHHHHCTTSEEEESSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEECCeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHH
Confidence 44444444467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccccccc
Q psy9226 90 LSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALSPLLS 169 (548)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
|+++|++++||+|.++.+++.++++++++++++++++...... .++.....+.+++.. .+ .
T Consensus 534 ilkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~----~~~~~~~~~~~~~~~-----------~~----~ 594 (1304)
T 2vsq_A 534 VLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAA----ELPYTGTTLFIDDQT-----------RF----E 594 (1304)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTST----TCCCCSEEEESSCGG-----------GG----G
T ss_pred HHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhh----ccCCCCcEEEecccc-----------cc----c
Confidence 9999999999999999999999999999999999876433211 111112222222110 00 0
Q ss_pred cCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHH
Q psy9226 170 EVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQAL 249 (548)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L 249 (548)
..... ......++++++|+|||||||.||||+++|+++.+. .+....+++.++|+++...|++|..+ ++.++.+|
T Consensus 595 ~~~~~---~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~-~~~~~~~l 669 (1304)
T 2vsq_A 595 EQASD---PATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAF-TFDFYASM 669 (1304)
T ss_dssp SCSSC---CCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHH-HHHHHHHH
T ss_pred cccCC---CCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHH-HHHHHHHH
Confidence 00111 112456799999999999999999999999999865 33444567889999999999999877 47788999
Q ss_pred HhccEEEEcCC---CCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCc
Q psy9226 250 IFGCCVVIRKK---FSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRI 324 (548)
Q Consensus 250 ~~G~~~v~~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~ 324 (548)
..|+++++.+. .++..+.+.|+++++|++.++|++++.|.+.. ...+++||.++ ||++++++.+++.+.++.
T Consensus 670 ~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 746 (1304)
T 2vsq_A 670 LNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMKGLRCILFGGERASVPHVRKALRIMGP 746 (1304)
T ss_dssp TTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHHTCSEEEEESSCCCHHHHHHHHHHHCT
T ss_pred HcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCCCccEEEEecCCCCHHHHHHHHHhCCC
Confidence 99999999874 68999999999999999999999999997643 22467888877 899999999999999876
Q ss_pred ceEEeeeecCCCCccccCCC-------CCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEE
Q psy9226 325 AQIGEFYGATEGNANIANID-------NQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGK 397 (548)
Q Consensus 325 ~~i~~~YG~tE~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~ 397 (548)
.++++.||+||++..++... .....+|+|+ .+++++++|++ +. +++.|..|||+++
T Consensus 747 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~------~~~~~~i~d~~-~~----------~~p~G~~GEl~i~ 809 (1304)
T 2vsq_A 747 GKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPI------SNASVYILNEQ-SQ----------LQPFGAVGELCIS 809 (1304)
T ss_dssp TCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEEC------TTEEEEEECTT-SC----------BCCTTCCEEEEEE
T ss_pred CEEEEeEChhHHhHHheeeeccCccccCCCCCCceee------CCCEEEEECCC-cC----------CCCCCCceEEEEe
Confidence 57999999999998765421 1223455544 47999999954 43 4589999999998
Q ss_pred ecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcch
Q psy9226 398 IVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKD 477 (548)
Q Consensus 398 ~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 477 (548)
|+ .+++||+++++ .
T Consensus 810 ----G~-~v~~GY~~~p~-------------------------------------------------------------~ 823 (1304)
T 2vsq_A 810 ----GM-GVSKGYVNRAD-------------------------------------------------------------L 823 (1304)
T ss_dssp ----ET-TCCCCBTTCHH-------------------------------------------------------------H
T ss_pred ----cc-ccCccccCCcc-------------------------------------------------------------c
Confidence 56 89999999998 6
Q ss_pred hhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEee
Q psy9226 478 SAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYG 547 (548)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g 547 (548)
+.++|..+++.++++||+|||+|++++||.|+|+||.||+||++|+||+|.|||++|.++|+|.+|+|++
T Consensus 824 T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie~~eIE~~l~~~p~V~~a~V~~ 893 (1304)
T 2vsq_A 824 TKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVA 893 (1304)
T ss_dssp HHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHHHSSSCCEEEEEE
T ss_pred chhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHHHHHHHHhCCCCceEEEEE
Confidence 8999988888778899999999999999999999999999999999999999999999999999999986
No 30
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=4.1e-59 Score=502.08 Aligned_cols=419 Identities=18% Similarity=0.217 Sum_probs=304.8
Q ss_pred cCcCCCHHHHHHHHHhhCCCceEEEECC----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH
Q psy9226 16 AQKDLTIADIFREHAVRSPNKVIFMFEN----------TEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVC 85 (548)
Q Consensus 16 ~~~~~tl~~~l~~~~~~~p~~~al~~~~----------~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~ 85 (548)
..+.+|+.++|+++++++|+++|+++.. +++||+||.++++++|+.|.+.|+ +||+|+++++|++++++
T Consensus 16 ~~~~~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~ 94 (562)
T 3ite_A 16 YTSTVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFA 94 (562)
T ss_dssp --CCCCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHH
T ss_pred ecccCCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHH
Confidence 3457899999999999999999998753 789999999999999999999999 79999999999999999
Q ss_pred HHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCCceEEEEeCCCCCCCCCCCCcccccc
Q psy9226 86 LWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGSNVKLFSWSPDTDSSSSPVPRSQALS 165 (548)
Q Consensus 86 ~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (548)
++|||+++|++++|+++.++.+++.+++++++++++|++++..... .......++... ...+.
T Consensus 95 ~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~------------~~~~~ 157 (562)
T 3ite_A 95 IIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGV-----ELPPETKVLDTK------------NQSFI 157 (562)
T ss_dssp HHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTC-----CCCTTCEEEETT------------CHHHH
T ss_pred HHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEcccccccc-----ccCccceeeccc------------chhhh
Confidence 9999999999999999999999999999999999999986543211 011111222111 01111
Q ss_pred cccccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH--------hCCCCCCEEEEeCCchh
Q psy9226 166 PLLSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ--------IGFRTKDRFYTPLPLYH 237 (548)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~--------~~~~~~d~~l~~~pl~h 237 (548)
+......... ......++++++|+|||||||.||+|.+||+++.+.+...... +.+...+++++..|++|
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (562)
T 3ite_A 158 ENLSTQDTSD--ILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAF 235 (562)
T ss_dssp HHHHHSCCSC--CCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTS
T ss_pred hhcccccccc--cccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchh
Confidence 1111111111 1123456889999999999999999999999999887765554 34778899999999999
Q ss_pred HHHHHHHHHHHHHhccEEEEcCCC-CHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHH
Q psy9226 238 TAGGAMCIGQALIFGCCVVIRKKF-SASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQI 314 (548)
Q Consensus 238 ~~g~~~~~~~~L~~G~~~v~~~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~ 314 (548)
..++ ..++.++..|+++++.+.+ .+..+.+.++++++|++.++|++++.+.... .++++||.++ |+++++++
T Consensus 236 ~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~~----~~~~~lr~~~~gG~~l~~~~ 310 (562)
T 3ite_A 236 DVHI-GEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLVP----EDAPHLVYLGVGGEKMTPRT 310 (562)
T ss_dssp THHH-HHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCCG----GGSTTCCEEEEESSCCCHHH
T ss_pred hhhH-HHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccCc----cccCceEEEEEecCCCCHHH
Confidence 8875 5677899999999987754 3577889999999999999999998874332 4578999887 89999999
Q ss_pred HHHHHHhcCcceEEeeeecCCCCccccCC----CCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCC
Q psy9226 315 WSEFVDRFRIAQIGEFYGATEGNANIANI----DNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGE 390 (548)
Q Consensus 315 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 390 (548)
.+.+.+.++. ++++.||+||++..++.. .....++|+|++ ++++.++|++++.++ ++|+
T Consensus 311 ~~~~~~~~~~-~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~~~~~~----------~~g~ 373 (562)
T 3ite_A 311 QQIWSSSDRV-ALVNVYGPTEVTIGCSAGRILPDSDTRCIGHPLG------DSVAHVLAPGSNEHV----------KKGM 373 (562)
T ss_dssp HHHHTTCSSC-EEEEEECCGGGCSCSEEEECCTTSCTTEEEEECT------TCEEEEECTTSSCBC----------CTTS
T ss_pred HHHHhhCCCc-EEEEeeccchheeeeeeeeecCCCCCccccccCC------CCeEEEEeCCCCCCC----------CCCC
Confidence 9999998887 699999999998766532 334567777665 688999998777654 8999
Q ss_pred ceeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccc
Q psy9226 391 PGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYL 470 (548)
Q Consensus 391 ~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 470 (548)
.|||+++ |+ .++.|||++++
T Consensus 374 ~GEl~v~----g~-~v~~GY~~~p~------------------------------------------------------- 393 (562)
T 3ite_A 374 AGELVIE----GS-LVANGYLNRPD------------------------------------------------------- 393 (562)
T ss_dssp CEEEEEE----ST-TSCCEESSCTT-------------------------------------------------------
T ss_pred ceEEEEe----cc-ccchhhCCCcc-------------------------------------------------------
Confidence 9999998 67 78999999887
Q ss_pred cccCcchhhhhhhhhhhccCCeeEeeCCeeeeeccccEEEeccCCCceeccCcccchhhHHHHhhcc-cCcceeeEee
Q psy9226 471 GYVNEKDSAKKIVTDVFEIGDSAFLSGDLLVMDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNA-SEYRDCVVYG 547 (548)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~-~~v~~~~v~g 547 (548)
.+...+ .++++||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.++ |.+.+++|++
T Consensus 394 ------~t~~~~-----~~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~~~~~~v~~ 460 (562)
T 3ite_A 394 ------AKGFCD-----INGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGEVSEVIRSLSPTDIDVVTLL 460 (562)
T ss_dssp ------CCSEEE-----ETTEEEEEEEEEEEECTTSCEEEEEEC----------------------------------
T ss_pred ------cccccc-----CCCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHHHHHHHHhcCCCceeEEEEE
Confidence 232211 24577999999999999999999999999999999999999999999987 7788888775
No 31
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=7e-56 Score=468.02 Aligned_cols=397 Identities=16% Similarity=0.148 Sum_probs=310.5
Q ss_pred cCCCHHHHHHHHHhhCCCceEEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Q psy9226 18 KDLTIADIFREHAVRSPNKVIFMFEN---------TEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWL 88 (548)
Q Consensus 18 ~~~tl~~~l~~~~~~~p~~~al~~~~---------~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (548)
+.+||.++|.++++++|+++|+++.+ +++||+||.++++++|..|++.|+ +||+|+++++|++++++++|
T Consensus 22 ~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~l 100 (480)
T 3t5a_A 22 SVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFL 100 (480)
T ss_dssp --CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHH
T ss_pred CcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHH
Confidence 47899999999999999999999865 899999999999999999999996 99999999999999999999
Q ss_pred HHHHcCcEEEecCC---CCChhHHHHHHHHhCeeEEEeCccchHHHHHHHhhcCC--ceEEEEeCCCCCCCCCCCCcccc
Q psy9226 89 GLSKLGVITALINH---NLRQNSLLHCINIAGVSAFIYGAELTDAVQEISTSLGS--NVKLFSWSPDTDSSSSPVPRSQA 163 (548)
Q Consensus 89 A~~~~G~~~v~l~~---~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 163 (548)
||+++|++++||++ ..+.+++.+++++++++++|++.+....+.+....... ...++.++..
T Consensus 101 A~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 167 (480)
T 3t5a_A 101 GALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLL------------- 167 (480)
T ss_dssp HHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGS-------------
T ss_pred HHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEeccc-------------
Confidence 99999999999999 77899999999999999999999877666554322221 1122222211
Q ss_pred cccccccCCCCCCCcccccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCC------CCEEEEeCCchh
Q psy9226 164 LSPLLSEVPTSPPSLSYRVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRT------KDRFYTPLPLYH 237 (548)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~------~d~~l~~~pl~h 237 (548)
..... .........++++++|+|||||||.||||++||+++.+++......+++.. +|++++.+|++|
T Consensus 168 ----~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 241 (480)
T 3t5a_A 168 ----DLDAP--NGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYH 241 (480)
T ss_dssp ----CTTCC-----CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTS
T ss_pred ----ccccc--cCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcC
Confidence 00000 111123456789999999999999999999999999999999888888887 999999999999
Q ss_pred HHHHHHHHHHHHHhccEEEEcCCC----CHHHHHHHHhhcCccEEEecHHHHHHHhcC----CCCCCCCccceeeee--c
Q psy9226 238 TAGGAMCIGQALIFGCCVVIRKKF----SASNYFSDVCKYKCTVGQYIGEMCRYLLST----PEKPEDKAHNVRLMF--G 307 (548)
Q Consensus 238 ~~g~~~~~~~~L~~G~~~v~~~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~----~~~~~~~l~~Lr~i~--G 307 (548)
.+|++..++.+|..|+++++.+.. ++..+++.++++++| +..+|+++..++.. ......++++||.++ |
T Consensus 242 ~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG 320 (480)
T 3t5a_A 242 DMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGS 320 (480)
T ss_dssp TTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECC
T ss_pred ccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecC
Confidence 999888888999999999998753 899999999999999 78889988887653 333456789999888 8
Q ss_pred CCCCHHHHHHHHHhcC-----cceEEeeeecCCCCccccCCCCCC----------------------CcccccccccCCc
Q psy9226 308 NGLRPQIWSEFVDRFR-----IAQIGEFYGATEGNANIANIDNQP----------------------GAIGFVSRLIPTI 360 (548)
Q Consensus 308 ~~l~~~~~~~~~~~~~-----~~~i~~~YG~tE~~~~~~~~~~~~----------------------~~~g~~~~~~~~~ 360 (548)
+++++++++++.+.++ ..++++.||+||++..++...... +....+.+.+.+.
T Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~ 400 (480)
T 3t5a_A 321 ERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPR 400 (480)
T ss_dssp TTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCS
T ss_pred CcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCccc
Confidence 8999999999999984 236999999999998776432211 0011222344455
Q ss_pred cceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccccCCcccccccccceeeccCCcccCCCCCCc
Q psy9226 361 YPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSDPPKNT 440 (548)
Q Consensus 361 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (548)
. ++++++|++++.+ ++.|+.|||+++ |+ .++.|||++++
T Consensus 401 ~-~~~~ivd~~~g~~----------~~~g~~GEl~v~----g~-~v~~GY~~~pe------------------------- 439 (480)
T 3t5a_A 401 S-PIVRIVDSDTCIE----------CPDGTVGEIWVH----GD-NVANGYWQKPD------------------------- 439 (480)
T ss_dssp S-SEEEEEETTTTEE----------CCTTBCEEEEEE----ST-TSCCCBTTBHH-------------------------
T ss_pred C-CEEEEEcCCCCcC----------CCCCCEEEEEEe----CC-ccccccccCcc-------------------------
Confidence 5 7889999877754 489999999998 67 89999999987
Q ss_pred ccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhh-----ccCCeeEeeCCeeeeeccccEEEecc
Q psy9226 441 TYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVF-----EIGDSAFLSGDLLVMDKWGYLYFKDR 513 (548)
Q Consensus 441 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~TGD~~~~~~~g~l~i~GR 513 (548)
++.+.|...++ .+++|||+|||+|++| ||+|+|+||
T Consensus 440 ------------------------------------~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-dG~l~~~GR 480 (480)
T 3t5a_A 440 ------------------------------------ESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-DGKMFIIGR 480 (480)
T ss_dssp ------------------------------------HHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-TTEEEECC-
T ss_pred ------------------------------------hhHHHHhhhhccccCCCCCCCeeeccceeeEE-CCEEEEeCC
Confidence 46666531111 1257899999999997 999999998
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=1.6e-39 Score=338.38 Aligned_cols=266 Identities=20% Similarity=0.184 Sum_probs=219.4
Q ss_pred ccCC-CCeEEEEEecCCCCCcceEEEechHHHHHHHHHH---HHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEE
Q psy9226 181 RVGV-QDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIA---YQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVV 256 (548)
Q Consensus 181 ~~~~-~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v 256 (548)
...+ +++++++|||||||.||+|.++|+++.+.+..+. ..+++.++|++++.+|+.|..+.+..++.++..|++++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 160 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTV 160 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEE
Confidence 3445 8899999999999999999999999987766553 34589999999999999888877777888999999999
Q ss_pred EcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCC--Cccceeeee--cCCCCHHHHHHHHHhcCcceEEeeee
Q psy9226 257 IRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPED--KAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYG 332 (548)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG 332 (548)
+.+..++..+++.|+++++|++.++|+++..|++....... .+++||.++ |+++++++.+.+.+.|+. ++++.||
T Consensus 161 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~-~v~~~YG 239 (436)
T 3qov_A 161 PAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERMLNV-KAYNSFG 239 (436)
T ss_dssp CCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHHTS-EEEEEEE
T ss_pred eCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHhCc-cEEecCc
Confidence 99888999999999999999999999999999876433332 368899887 899999999999999988 5999999
Q ss_pred cCCCCcc-ccCCCCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCcccccccc
Q psy9226 333 ATEGNAN-IANIDNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYV 411 (548)
Q Consensus 333 ~tE~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~ 411 (548)
+||+++. +..........+.+ ..++.+.++|++++.++ ++|+.|||++++ .
T Consensus 240 ~TE~~~~~~~~~~~~~~g~~~~------~~~~~v~i~d~~~g~~~----------~~g~~Gel~v~~----~-------- 291 (436)
T 3qov_A 240 MTEMNGPGVAFECQEQNGMHFW------EDCYLVEIIDPETGEPV----------PEGEIGELVLTT----L-------- 291 (436)
T ss_dssp EGGGTEEEEEEECTTCSSEEEC------TTTEEEEEECTTTCSBC----------STTCCEEEEEEE----S--------
T ss_pred chhhcCCeeEEecCCCCeeEEc------cCceEEEEEECCCCCCC----------CCCCceEEEEec----c--------
Confidence 9999654 33222211223332 23688899998888655 899999999973 1
Q ss_pred CCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccCC
Q psy9226 412 NEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGD 491 (548)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (548)
+...+ ..
T Consensus 292 ------------------------------------------------------------------~~~~~-------~~ 298 (436)
T 3qov_A 292 ------------------------------------------------------------------DREMM-------PL 298 (436)
T ss_dssp ------------------------------------------------------------------SCCSS-------CC
T ss_pred ------------------------------------------------------------------CcCCc-------eE
Confidence 11111 26
Q ss_pred eeEeeCCeeeeeccc------c---EEEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 492 SAFLSGDLLVMDKWG------Y---LYFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 492 ~~~~TGD~~~~~~~g------~---l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
+||+|||+|+++++| + ++|+||.||+||++|++|+|.+||++|.++|.|.+++|+++
T Consensus 299 ~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l~~~p~v~~~~vv~~ 364 (436)
T 3qov_A 299 IRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKILVQFPELGSNYLITL 364 (436)
T ss_dssp CSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHHTTCTTEEEEEEEEE
T ss_pred EEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHHHHhCcCcCCcEEEEE
Confidence 799999999999998 5 69999999999999999999999999999999999999873
No 33
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=1.6e-39 Score=328.49 Aligned_cols=245 Identities=12% Similarity=0.133 Sum_probs=194.0
Q ss_pred CCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcCCCCH
Q psy9226 184 VQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRKKFSA 263 (548)
Q Consensus 184 ~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~~~~~ 263 (548)
.+++++|+|||||||.||+|++||+++.+.+......++++++|++++.+|++|.+|+. .++.++..|+++++.++.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~-~~~~~l~~g~~~~~~~~~-- 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLM-MLVRGMELDWELTVTEPT-- 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHH-HHHHHHHHTCEEEEECCC--
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHH-HHHHHHHhCcEEEecCcc--
Confidence 47899999999999999999999999999999999999999999999999999999974 477899999999887642
Q ss_pred HHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCHHHHHHHHHhcCcceEEeeeecCCCCcccc
Q psy9226 264 SNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYGATEGNANIA 341 (548)
Q Consensus 264 ~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~ 341 (548)
...++.|+++++|++.++|++++.|++.... ...+++||.++ |+++++++.+++.+ ++. ++++.||+||++..++
T Consensus 113 ~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~~-~~~l~~lr~v~~gG~~l~~~~~~~~~~-~~~-~~~~~YG~TEt~~~~~ 189 (358)
T 4gs5_A 113 ANPLAGLDHADFDFVAMVPMQLQSILENSAT-SGQVDRLGKVLLGGAPVNHALAMQISD-LAM-PVYQSYGMTETVSHVA 189 (358)
T ss_dssp SCTTTTCSSCCCSEEEECHHHHHHHHHCTTT-GGGGGGGCSEEECSSCCCHHHHHHHHT-CSS-CEEEEEECGGGSSEEE
T ss_pred ccHHHHHHHhCCeEEEcChHHHHHhhccccc-cccCCcceEEEEcccCCCchheecccc-cCc-eEEeccccccccceee
Confidence 2236678999999999999999999887653 34688999887 88999999999876 577 5999999999887654
Q ss_pred CCCCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccccCCcccccccc
Q psy9226 342 NIDNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIV 421 (548)
Q Consensus 342 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy~~~~~~~~~~~ 421 (548)
.... ..++.|++.+. +| .+..+|.++
T Consensus 190 ~~~~-----------------------------------------~~~~~g~~~~~----~p-gv~~~~~~~-------- 215 (358)
T 4gs5_A 190 LKAL-----------------------------------------NGPEASELYVF----LP-GIQYGVDER-------- 215 (358)
T ss_dssp EEEC-----------------------------------------SSTTCCSCEEE----CT-TCEEEECTT--------
T ss_pred cccc-----------------------------------------cccccceeecc----CC-CeEEEecCc--------
Confidence 3211 11122333322 22 222333221
Q ss_pred cceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccCCeeEeeCCeee
Q psy9226 422 TDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIGDSAFLSGDLLV 501 (548)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~ 501 (548)
||++++||. ..+|||+|||+|+
T Consensus 216 ------------------------------------Gel~~~g~~----------------------~~~g~~~TGDlg~ 237 (358)
T 4gs5_A 216 ------------------------------------GCLHISGAV----------------------TNGQTVQTNDLVE 237 (358)
T ss_dssp ------------------------------------SEEEEESGG----------------------GTTCCEEEEEEEE
T ss_pred ------------------------------------CceEEeccc----------------------ccCcceecCCccc
Confidence 344444442 1378999999999
Q ss_pred eeccccEEEeccCCCceeccCcccchhhHHHHhh---cccCcceeeEee
Q psy9226 502 MDKWGYLYFKDRTGDTFRWKGENVSTCEVEGVVS---NASEYRDCVVYG 547 (548)
Q Consensus 502 ~~~~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~---~~~~v~~~~v~g 547 (548)
+|++| ++++||.||+||++|++|+|.|||++|. +||.|.+|+|++
T Consensus 238 ~d~~g-~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~p~V~~a~vv~ 285 (358)
T 4gs5_A 238 IHGNA-FQWIGRADNVINSGGVKIVLDQIDQRIAAVFHHLNIGNAFFCW 285 (358)
T ss_dssp ECSSE-EEEEEEGGGEEEETTEEEEHHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred cccCc-eEEcccccCeEEECCEEECHHHHHHHHHHhccCCCccEEEEEE
Confidence 99988 6678999999999999999999998874 689999998874
No 34
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=4.8e-38 Score=327.96 Aligned_cols=265 Identities=17% Similarity=0.117 Sum_probs=213.9
Q ss_pred ccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHH---HHhCCCCCCEEEEeCCch-hHHHHHHHHHHHHHhccEEE
Q psy9226 181 RVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIA---YQIGFRTKDRFYTPLPLY-HTAGGAMCIGQALIFGCCVV 256 (548)
Q Consensus 181 ~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~pl~-h~~g~~~~~~~~L~~G~~~v 256 (548)
...++++++++|||||||.||+|.++|+++........ ..+++.++|++++.+|++ |..+ ...++.++..|++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~~~~~G~~~~ 166 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGG-LGIHYGAERLGCMVV 166 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHH-HHHHHHHHHHTCEEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccH-HHHHHHHHHcCCEEE
Confidence 34568899999999999999999999999987655443 367889999999999995 5555 455778999999999
Q ss_pred EcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCC--Cccceeeee--cCCCCHHHHHHHHHhcCcceEEeeee
Q psy9226 257 IRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPED--KAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYG 332 (548)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG 332 (548)
+.+..++..+++.|+++++|++.++|+++..|++....... .+++||.++ |+++++++.+.+.+.++. ++++.||
T Consensus 167 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~-~v~~~YG 245 (443)
T 2y4o_A 167 PMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRVGI-DALDIYG 245 (443)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTC-EEEEEEE
T ss_pred ECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHhCc-CEEeccC
Confidence 98888999999999999999999999999999765332222 257898877 899999999999999987 5999999
Q ss_pred cCCCCcc-cc-CCCCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccc
Q psy9226 333 ATEGNAN-IA-NIDNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGY 410 (548)
Q Consensus 333 ~tE~~~~-~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy 410 (548)
+||+++. ++ ..... ..|.+. +..++.+.++|+++++++ +.|+.|||+++..
T Consensus 246 ~TE~~g~~~~~~~~~~--~~g~~~----~~~~~~~~i~d~~~g~~~----------~~G~~Gel~v~~~----------- 298 (443)
T 2y4o_A 246 LSEVMGPGVACECVET--KDGPVI----WEDHFYPEIIDPVTGEVL----------PDGSQGELVFTSL----------- 298 (443)
T ss_dssp ETTTTEEEEEEECTTT--CCSEEE----CTTTEEEEEECTTTCCBC----------CTTCCEEEEEEES-----------
T ss_pred chhhcCCeEEeccCCC--CCceEE----ccCCeEEEEEcCCCCCCC----------CCCCceEEEEeCC-----------
Confidence 9998543 32 22211 123322 123588889998777655 8899999998721
Q ss_pred cCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccC
Q psy9226 411 VNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIG 490 (548)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (548)
+...| .
T Consensus 299 -------------------------------------------------------------------t~~~~-------p 304 (443)
T 2y4o_A 299 -------------------------------------------------------------------TKEAM-------P 304 (443)
T ss_dssp -------------------------------------------------------------------SCSSS-------C
T ss_pred -------------------------------------------------------------------CcccC-------h
Confidence 11111 2
Q ss_pred CeeEeeCCeeeeecc-ccE-----EEeccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 491 DSAFLSGDLLVMDKW-GYL-----YFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 491 ~~~~~TGD~~~~~~~-g~l-----~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.+||+|||+|+++++ |++ +|+||.||+||++|++|+|.+||++|.++|.|.+++|+++
T Consensus 305 ~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V~~~~vv~~ 368 (443)
T 2y4o_A 305 VIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQITL 368 (443)
T ss_dssp CSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEE
T ss_pred hheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHHhCcCcCccEEEEE
Confidence 679999999999999 987 8999999999999999999999999999999999998863
No 35
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=6.5e-38 Score=326.35 Aligned_cols=264 Identities=15% Similarity=0.069 Sum_probs=213.2
Q ss_pred ccCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHH---HHhCCCCCCEEEEeCCc-hhHHHHHHHHHHHHHhccEEE
Q psy9226 181 RVGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIA---YQIGFRTKDRFYTPLPL-YHTAGGAMCIGQALIFGCCVV 256 (548)
Q Consensus 181 ~~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~pl-~h~~g~~~~~~~~L~~G~~~v 256 (548)
...++++++++|||||||.||+|.+||+++...+.... ..+++.++|++++.+|+ .|..++ ..++.++..|++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~ 164 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGL-GAHYGAERAGLTVI 164 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHTTCEEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccch-HHHHHHHHcCCEEE
Confidence 34568899999999999999999999999987665433 35788999999999998 566654 45678999999999
Q ss_pred EcCCCCHHHHHHHHhhcCccEEEecHHHHHHHhcCCCCCCC--Cccceeeee--cCCCCHHHHHHHHHhcCcceEEeeee
Q psy9226 257 IRKKFSASNYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPED--KAHNVRLMF--GNGLRPQIWSEFVDRFRIAQIGEFYG 332 (548)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~--G~~l~~~~~~~~~~~~~~~~i~~~YG 332 (548)
+.+..++..+++.|+++++|++.++|+++..|++....... .+++||.++ |+++++++.+.+.+.++. ++++.||
T Consensus 165 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~-~v~~~YG 243 (437)
T 2y27_A 165 PFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGI-DAVDIYG 243 (437)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTS-EEEEEEE
T ss_pred eCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHHCc-CEEecCC
Confidence 88888999999999999999999999999999865332222 247898877 899999999999999987 5999999
Q ss_pred cCCCCcc-cc-CCCCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCceeEEEEecCCCCccccccc
Q psy9226 333 ATEGNAN-IA-NIDNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEPGVFIGKIVPSNPARAYLGY 410 (548)
Q Consensus 333 ~tE~~~~-~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~Ge~~~~~~~~~~~~~~~gy 410 (548)
+||+++. ++ ..... ..|.+. +..++.+.++|+++++++ +.|+.|||+++..
T Consensus 244 ~TE~~g~~~~~~~~~~--~~g~~~----~~~~~~~~i~d~~~g~~~----------~~g~~Gel~v~~~----------- 296 (437)
T 2y27_A 244 LSEVMGPGVASECVET--KDGPTI----WEDHFYPEIIDPETGEVL----------PDGELGELVFTSL----------- 296 (437)
T ss_dssp ETTTTEEEEEECCTTT--CSSCEE----CTTTEEEEEECTTTCCBC----------CTTCCEEEEEEES-----------
T ss_pred chhhcCCeeEEecCCC--CCceeE----ccCceEEEEEcCCCCCCC----------CCCCccEEEEecC-----------
Confidence 9998432 32 22211 123222 123688889998777655 8899999998721
Q ss_pred cCCcccccccccceeeccCCcccCCCCCCcccccCCCccCCCCCceeccccCCCCccccccccCcchhhhhhhhhhhccC
Q psy9226 411 VNEKDSAKKIVTDVFEIGDSAFLSDPPKNTTYNKKGLCSRCEPGVFIGKIVPSNPARAYLGYVNEKDSAKKIVTDVFEIG 490 (548)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (548)
+...| .
T Consensus 297 -------------------------------------------------------------------t~~~~-------~ 302 (437)
T 2y27_A 297 -------------------------------------------------------------------TKEAL-------P 302 (437)
T ss_dssp -------------------------------------------------------------------SCSSS-------C
T ss_pred -------------------------------------------------------------------CcCCc-------h
Confidence 11111 2
Q ss_pred CeeEeeCCeeeeec-cccE-----EEeccCCCceeccCcccchhhHHHHhhcccCcceeeEee
Q psy9226 491 DSAFLSGDLLVMDK-WGYL-----YFKDRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYG 547 (548)
Q Consensus 491 ~~~~~TGD~~~~~~-~g~l-----~i~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g 547 (548)
++||+|||+|++|+ +|++ +|+||.||+||++|++|+|.+||++|.++|.|.+++|++
T Consensus 303 ~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V~~~~vv~ 365 (437)
T 2y27_A 303 IIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQRALAPHYQIV 365 (437)
T ss_dssp CCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTTCTTBCSCCEEE
T ss_pred hheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHHHhCcCcCccEEEE
Confidence 67999999999999 6986 899999999999999999999999999999999999886
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.95 E-value=4.5e-28 Score=246.31 Aligned_cols=203 Identities=17% Similarity=0.085 Sum_probs=161.8
Q ss_pred cCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHH---HHhCCCCCCEEEEeCCc-hhHHHHHHHHHHHHHhccEEEE
Q psy9226 182 VGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIA---YQIGFRTKDRFYTPLPL-YHTAGGAMCIGQALIFGCCVVI 257 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~pl-~h~~g~~~~~~~~L~~G~~~v~ 257 (548)
..++++++++|||||||.||+|.++|+++.....+.. ..+++.++|++++.+|+ .|..|+.. .+.++..|+ +++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~-~~~~~~~G~-~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAIN-KERALRLGG-MFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHH-HHHHHHTTS-CEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHH-HHHHHHcCC-EEE
Confidence 4668899999999999999999999999998887543 44567899999999999 99988755 445689999 777
Q ss_pred cCCCCHH-----------------------HHHHHHhhcCccEEEecHHHHHHHhcCCCCCCCCccceeeee--cCCCCH
Q psy9226 258 RKKFSAS-----------------------NYFSDVCKYKCTVGQYIGEMCRYLLSTPEKPEDKAHNVRLMF--GNGLRP 312 (548)
Q Consensus 258 ~~~~~~~-----------------------~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~--G~~l~~ 312 (548)
...+++. .+++.|+++++|++.++|+++..|++........+++||.++ |+++++
T Consensus 166 ~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~ 245 (369)
T 3hgu_A 166 SIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNL 245 (369)
T ss_dssp CCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCH
T ss_pred CccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCH
Confidence 7777887 888899999999999999999999877543334567899887 899999
Q ss_pred HHHHHHH-HhcCcceEEeeeecCCCCccccCCCCCCCcccccccccCCccceEEEEECCCCCcccccCCCcceecCCCCc
Q psy9226 313 QIWSEFV-DRFRIAQIGEFYGATEGNANIANIDNQPGAIGFVSRLIPTIYPISIIRVDPVTSEPIRNKKGLCTRCEPGEP 391 (548)
Q Consensus 313 ~~~~~~~-~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 391 (548)
++.+++. +.|+..++++.||+||+++++..... .++|.++...+...++++.++|+++++++ ++|+.
T Consensus 246 ~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~--~~~G~~~~~~~~~~~~~v~ivD~~~g~~v----------p~G~~ 313 (369)
T 3hgu_A 246 DEIKFIASEILPDCEFSASYGSTSALGVSRSLLI--TSESQQVIYDSFSPFITYDVVDSITAQTV----------EYGER 313 (369)
T ss_dssp HHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB--CTTCSSCEEECCTTTEEEEEECTTTCSBC----------CTTCE
T ss_pred HHHHHHHHHhCCCcEEEcccCchhhhcceecccc--ccCCCcccccCCCCCeEEEEECCCCCcCC----------CCCCc
Confidence 9999999 89944479999999999876643221 14677643333355799999998788765 89999
Q ss_pred eeEEEEe
Q psy9226 392 GVFIGKI 398 (548)
Q Consensus 392 Ge~~~~~ 398 (548)
|||+++.
T Consensus 314 GEl~vt~ 320 (369)
T 3hgu_A 314 GNVIVTH 320 (369)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999973
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.69 E-value=1.1e-07 Score=99.36 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=40.2
Q ss_pred EeeCCeeeeec----cccEEEeccCCCceeccCcccchhhHHHHhhcc
Q psy9226 494 FLSGDLLVMDK----WGYLYFKDRTGDTFRWKGENVSTCEVEGVVSNA 537 (548)
Q Consensus 494 ~~TGD~~~~~~----~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~~ 537 (548)
|++||+.+... ...+.|+||.++++.+.|++++..+||+++.+.
T Consensus 400 Yr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~~~v~~al~~a 447 (581)
T 4eql_A 400 MRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAVSQA 447 (581)
T ss_dssp EECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEHHHHHHHHHHC
T ss_pred EEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCHHHHHHHHHHH
Confidence 89999999975 368999999999999999999999999999843
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.52 E-value=5.9e-07 Score=94.18 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=39.6
Q ss_pred EeeCCeeeeec----cccEEEeccCCCceeccCcccchhhHHHHhhc
Q psy9226 494 FLSGDLLVMDK----WGYLYFKDRTGDTFRWKGENVSTCEVEGVVSN 536 (548)
Q Consensus 494 ~~TGD~~~~~~----~g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~ 536 (548)
|++||+.+++. ...+.|+||.+++|++.|+++++.+||+++.+
T Consensus 412 Yr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~~~~v~~av~~ 458 (609)
T 4b2g_A 412 YRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVDN 458 (609)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHHHH
T ss_pred eecCCEEEEeecCCCCcEEEEEEecCCeEEccccCCCHHHHHHHHHH
Confidence 89999999974 46899999999999999999999999999973
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.47 E-value=7.2e-07 Score=93.10 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=39.1
Q ss_pred EeeCCeeeeecc----ccEEEeccCCCceeccCcccchhhHHHHhhc
Q psy9226 494 FLSGDLLVMDKW----GYLYFKDRTGDTFRWKGENVSTCEVEGVVSN 536 (548)
Q Consensus 494 ~~TGD~~~~~~~----g~l~i~GR~~d~i~~~G~~v~~~~iE~~l~~ 536 (548)
|++||+.+...- ..+.|+||.++++++.|+++++.+||.++.+
T Consensus 407 Yr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~v~~al~~ 453 (581)
T 4epl_A 407 YRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVES 453 (581)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHHHH
T ss_pred EEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHHHHHHHHH
Confidence 899999999752 5799999999999999999999999999974
No 40
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=98.12 E-value=8.3e-07 Score=72.21 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=34.9
Q ss_pred ccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 512 DRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 512 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
.|.||+|+++|.||+|.|||++|.+||+|.+++|+|+
T Consensus 1 srADDmIiv~G~nv~P~eIE~vl~~~p~v~~~~vv~v 37 (109)
T 3lax_A 1 SNADDMIILKGVNIFPIQIETILLQFKELGSDYLITL 37 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTEEEEEEEEE
T ss_pred CCcCEEEEECCEEECHHHHHHHHHhCCCcccceEEEE
Confidence 3899999999999999999999999999999999874
No 41
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=98.02 E-value=1.7e-06 Score=70.26 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=34.8
Q ss_pred ccCCCceeccCcccchhhHHHHhhcccCcceeeEeeC
Q psy9226 512 DRTGDTFRWKGENVSTCEVEGVVSNASEYRDCVVYGV 548 (548)
Q Consensus 512 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~g~ 548 (548)
||.||+|+++|.+++|.+||++|.++|+|.+++++++
T Consensus 1 GR~~D~Iiv~G~nv~P~eIE~~l~~~p~v~~~~~v~v 37 (109)
T 3gxs_A 1 SNADDMIILKGVNIFPIQIETILLQFKELGSDYLITL 37 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTEEEEEEEEE
T ss_pred CCccCEEEECCEEECHHHHHHHHHhCCCcCCcEEEEE
Confidence 8999999999999999999999999999998888764
No 42
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=90.83 E-value=1.8 Score=43.60 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=72.7
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEE
Q psy9226 45 EWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLEN--RPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFI 122 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 122 (548)
.+|.+.+...+..++..+...|+.++|++...++- ....+..+++++..|+..++++. .+++.+...+++.++.+++
T Consensus 109 ~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 187 (437)
T 2y27_A 109 GYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGG-GQTEKQVQLIQDFRPDIIM 187 (437)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCS-CCHHHHHHHHHHHCCSEEE
T ss_pred ecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHhCCCEEE
Confidence 57999999888888888888899999999988875 34445567888999999987765 4788899999999999999
Q ss_pred eCccchHHHHHH
Q psy9226 123 YGAELTDAVQEI 134 (548)
Q Consensus 123 ~~~~~~~~~~~~ 134 (548)
..+.....+.+.
T Consensus 188 ~~Ps~~~~l~~~ 199 (437)
T 2y27_A 188 VTPSYMLSIADE 199 (437)
T ss_dssp ECHHHHHHHHHH
T ss_pred ECHHHHHHHHHH
Confidence 988776666543
No 43
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=90.48 E-value=2 Score=43.20 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=73.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEE
Q psy9226 45 EWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLEN--RPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFI 122 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 122 (548)
.+|.+.+...+..+++.+...++.++|++....+- ....+..+++++..|+..++.+.. .++.+...+++.++.+++
T Consensus 105 ~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~i~~~~~t~~~ 183 (436)
T 3qov_A 105 VHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG-NSKRQIKFISDFKTTALH 183 (436)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHTCCEEE
T ss_pred EECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHHCCCEEE
Confidence 58999999999989888888899999999988874 344556778889999999887654 678899999999999999
Q ss_pred eCccchHHHHHH
Q psy9226 123 YGAELTDAVQEI 134 (548)
Q Consensus 123 ~~~~~~~~~~~~ 134 (548)
..+.....+.+.
T Consensus 184 ~~P~~~~~l~~~ 195 (436)
T 3qov_A 184 AIPSYAIRLAEV 195 (436)
T ss_dssp CCHHHHHHHHHH
T ss_pred ECHHHHHHHHHH
Confidence 998877666554
No 44
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=90.38 E-value=2 Score=43.34 Aligned_cols=89 Identities=13% Similarity=0.189 Sum_probs=72.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEE
Q psy9226 45 EWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENR--PEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFI 122 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 122 (548)
.+|.+.+...+..++..+...|+.++|++...++-+ ...+..+++++..|+..++++.. ..+.+...+++.++.+++
T Consensus 111 ~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l~ 189 (443)
T 2y4o_A 111 GYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKIIL 189 (443)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEEE
T ss_pred ecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEEE
Confidence 579999998888888888888999999999888753 34455678888999999887764 788899999999999999
Q ss_pred eCccchHHHHHH
Q psy9226 123 YGAELTDAVQEI 134 (548)
Q Consensus 123 ~~~~~~~~~~~~ 134 (548)
..+.....+.+.
T Consensus 190 ~~Ps~~~~l~~~ 201 (443)
T 2y4o_A 190 VTPSYMLNLIDE 201 (443)
T ss_dssp ECHHHHHHHHHH
T ss_pred ECHHHHHHHHHH
Confidence 988766655543
No 45
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=81.78 E-value=16 Score=37.28 Aligned_cols=98 Identities=8% Similarity=0.042 Sum_probs=73.9
Q ss_pred CCCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEecCC
Q psy9226 33 SPNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRP-EFVCLWLGLSKLGVITALINH 102 (548)
Q Consensus 33 ~p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 102 (548)
.|+.+|++.. +-.+|.+.+...+...... .++.+++++...+|-.. -.+..+++++..|+..+..+.
T Consensus 161 ~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 237 (501)
T 3ipl_A 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKES---LGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDK 237 (501)
T ss_dssp CTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHH---TCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSS
T ss_pred CCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHh---hCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCCC
Confidence 4577777665 2358999888777665543 48889999988887643 334456778889999887764
Q ss_pred CCChhHHHHHHHHhCeeEEEeCccchHHHHHH
Q psy9226 103 NLRQNSLLHCINIAGVSAFIYGAELTDAVQEI 134 (548)
Q Consensus 103 ~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 134 (548)
..++.+...+++.++..++..+.....+.+.
T Consensus 238 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 268 (501)
T 3ipl_A 238 -FNAEQILTMIKNERITHISLVPQTLNWLMQQ 268 (501)
T ss_dssp -CCHHHHHHHHHHSCCCEEEECHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHcCCcEEEchHHHHHHHHhc
Confidence 6789999999999999999998877666554
No 46
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=79.53 E-value=21 Score=36.81 Aligned_cols=102 Identities=9% Similarity=-0.064 Sum_probs=74.8
Q ss_pred CCCCeEEEEEecCC-CCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 183 GVQDKLIYIYTSGT-TGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 183 ~~~~~a~i~~TSGT-TG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
.++.+|++....+. .+. .-.+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..
T Consensus 32 ~p~~~A~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl 107 (549)
T 3g7s_A 32 FGEKTAIISAEPKFPSEF--PESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDY--VMTIYALWRVAATPVPI 107 (549)
T ss_dssp HTTSEEEEEESSCCCCSS--CSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEeCCCcccccc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEEcc
Confidence 45777776543221 122 2368999888766655444 5789999999999865544 56788999999999976
Q ss_pred C-CCCHHHHHHHHhhcCccEEEecHHHHHHH
Q psy9226 259 K-KFSASNYFSDVCKYKCTVGQYIGEMCRYL 288 (548)
Q Consensus 259 ~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 288 (548)
+ .....++...+++.++..++..+.....+
T Consensus 108 ~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~ 138 (549)
T 3g7s_A 108 NPMYKSFELEHILNDSEATTLVVHSMLYENF 138 (549)
T ss_dssp CTTCCHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 5 56888999999999999998887665544
No 47
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=77.75 E-value=10 Score=39.28 Aligned_cols=98 Identities=14% Similarity=0.067 Sum_probs=72.1
Q ss_pred CCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC-C
Q psy9226 185 QDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK-K 260 (548)
Q Consensus 185 ~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~-~ 260 (548)
+.++++.+..+.++ ..+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..+ .
T Consensus 35 ~~~a~~a~~~~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~ 108 (550)
T 3rix_A 35 LVPGTIAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF--FMPVLGALFIGVAVAPANDI 108 (550)
T ss_dssp TSTTCEEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT--HHHHHHHHHHTCEEEECCTT
T ss_pred CCceEEEeeecCCC----cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccH--HHHHHHHHHcCCEEeecCCc
Confidence 45555533333333 368999988766655444 5899999999998865543 566889999999998765 5
Q ss_pred CCHHHHHHHHhhcCccEEEecHHHHHHH
Q psy9226 261 FSASNYFSDVCKYKCTVGQYIGEMCRYL 288 (548)
Q Consensus 261 ~~~~~~~~~i~~~~vt~l~~~P~~l~~l 288 (548)
....++...++..++..++..+..+..+
T Consensus 109 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 136 (550)
T 3rix_A 109 YNERELLNSMNISQPTVVFVSKKGLQKI 136 (550)
T ss_dssp CCHHHHHHHHHHHCCSEEEECGGGHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEcHHHHHHH
Confidence 6888999999999999999887665544
No 48
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=77.17 E-value=18 Score=36.96 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=72.1
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.+|++. ..-.+|.+.+...+..+... .++.++|++...++-+.. ++..+++++..|+..+..+
T Consensus 19 ~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~Ga~~vpl~ 87 (509)
T 3ivr_A 19 FPDRTAFMV---------DGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSE--MIELIGAVALIGAILLPVN 87 (509)
T ss_dssp STTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHH--HHHHHHHHHHTTCEEEECC
T ss_pred CCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecC
Confidence 457777664 12468999998776665554 478999999999986554 3567889999999999766
Q ss_pred -CCCHHHHHHHHhhcCccEEEecHHHHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIGEMCRY 287 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P~~l~~ 287 (548)
....+++...+++.++..++..+.....
T Consensus 88 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 88 YRLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp TTSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred CCCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 5688899999999999999887765544
No 49
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=75.92 E-value=17 Score=37.39 Aligned_cols=97 Identities=10% Similarity=-0.016 Sum_probs=71.5
Q ss_pred cCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 182 VGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
..++.++++.. .+| -.+|.+.+...+..+... .++.++|++...++-+..+ +..+++++..|+..+..
T Consensus 34 ~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~--~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 34 NHSSKPCLING---ANG----DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEF--VLAFLGASHRGAIITAA 104 (536)
T ss_dssp GSTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEEC
T ss_pred cCCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHHhCCEEecc
Confidence 34577776542 222 358999987766655444 5789999999999865543 56788999999998876
Q ss_pred C-CCCHHHHHHHHhhcCccEEEecHHHHHH
Q psy9226 259 K-KFSASNYFSDVCKYKCTVGQYIGEMCRY 287 (548)
Q Consensus 259 ~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~ 287 (548)
+ ...++++...+++.++..++..+.....
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 134 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEK 134 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHH
Confidence 5 5688899999999999999887655433
No 50
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=75.91 E-value=29 Score=35.70 Aligned_cols=99 Identities=9% Similarity=-0.038 Sum_probs=72.8
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.++++....+ ..-.+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..+
T Consensus 31 ~p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 31 FGRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRH--LEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp STTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECC
T ss_pred CCCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHhcCcEEEecC
Confidence 4566666543211 23568999888766654444 5789999999998865443 566889999999999765
Q ss_pred -CCCHHHHHHHHhhcCccEEEecHHHHHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIGEMCRYL 288 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 288 (548)
...++++...+++.++..++..+.+...+
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 56888999999999999999887765443
No 51
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=75.70 E-value=41 Score=34.58 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=72.1
Q ss_pred CCCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH---HHHHHHHcCcEEEec
Q psy9226 33 SPNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVC---LWLGLSKLGVITALI 100 (548)
Q Consensus 33 ~p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~---~~lA~~~~G~~~v~l 100 (548)
.++.+|++.. +-.+|.+.+...+...+.. .++.++|++...+|-...+-. .+++++..|+..+..
T Consensus 189 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 265 (544)
T 3o83_A 189 PADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMA 265 (544)
T ss_dssp CTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEEC
Confidence 3566777664 2358999988877766554 478899999988876543332 478888899998876
Q ss_pred CCCCChhHHHHHHHHhCeeEEEeCccchHHHHH
Q psy9226 101 NHNLRQNSLLHCINIAGVSAFIYGAELTDAVQE 133 (548)
Q Consensus 101 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~ 133 (548)
+. ..+..+...+++.++..+...+.....+.+
T Consensus 266 ~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 297 (544)
T 3o83_A 266 PN-PEPLNCFSIIQRHQVNMASLVPSAVIMWLE 297 (544)
T ss_dssp SS-CCHHHHHHHHHHHTCCEEEECHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHCCCEEEechHHHHHHHh
Confidence 54 578888899999999999998876665544
No 52
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=74.94 E-value=14 Score=38.23 Aligned_cols=97 Identities=10% Similarity=0.168 Sum_probs=71.2
Q ss_pred CceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEecCCC
Q psy9226 35 NKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEF--VCLWLGLSKLGVITALINHN 103 (548)
Q Consensus 35 ~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~ 103 (548)
+.+|++.. +-.+|.+.+...+......+...++.++|++...+|-...+ ...+++++ .|+..+.++ .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 67777765 23689999887766655443335788999988887765433 23356777 999988775 4
Q ss_pred CChhHHHHHHHHhCeeEEEeCccchHHHHH
Q psy9226 104 LRQNSLLHCINIAGVSAFIYGAELTDAVQE 133 (548)
Q Consensus 104 ~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~ 133 (548)
..++.+...+++.++..++..+.....+.+
T Consensus 270 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 299 (548)
T 2d1s_A 270 FDEETFLKTLQDYKCTSVILVPTLFAILNK 299 (548)
T ss_dssp CCHHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEecHHHHHHHHh
Confidence 678899999999999999998876655543
No 53
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=74.61 E-value=32 Score=35.38 Aligned_cols=98 Identities=13% Similarity=0.004 Sum_probs=72.4
Q ss_pred CCCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--H-HHHHHHHcCcEEEec
Q psy9226 33 SPNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFV--C-LWLGLSKLGVITALI 100 (548)
Q Consensus 33 ~p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~--~-~~lA~~~~G~~~v~l 100 (548)
.|+.+|++.. +-.+|.+.+...+...... .++.++|++...+|-...+- . .+++++..|+..+..
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 180 KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEV---CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHh---hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 4566776664 2368999888777665543 37889999888887654332 2 478888899998876
Q ss_pred CCCCChhHHHHHHHHhCeeEEEeCccchHHHHHH
Q psy9226 101 NHNLRQNSLLHCINIAGVSAFIYGAELTDAVQEI 134 (548)
Q Consensus 101 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 134 (548)
+ ...++.+...+++.++..++..+.....+.+.
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 289 (539)
T 1mdb_A 257 P-SPSPDDAFPLIEREKVTITALVPPLAMVWMDA 289 (539)
T ss_dssp S-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhC
Confidence 5 46788999999999999999988776666544
No 54
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=74.41 E-value=30 Score=34.81 Aligned_cols=106 Identities=12% Similarity=-0.044 Sum_probs=75.9
Q ss_pred cCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHHhCC--CCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 182 VGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQIGF--RTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
..++.+|++.........-....+|.+.+...+..+...+.- .++|++...++-+.-+ +..+++++..|+..+..+
T Consensus 36 ~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~ 113 (480)
T 3t5a_A 36 LQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGSTGDRVVISAPQGLEY--VVAFLGALQAGRIAVPLS 113 (480)
T ss_dssp HSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEEC
T ss_pred hCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcHHH--HHHHHHHHHhCcEEEeeC
Confidence 346778777654321111234679999999888877776531 3789999888865443 567889999999998765
Q ss_pred C----CCHHHHHHHHhhcCccEEEecHHHHHHHh
Q psy9226 260 K----FSASNYFSDVCKYKCTVGQYIGEMCRYLL 289 (548)
Q Consensus 260 ~----~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 289 (548)
. ...+++...+++.++..++..+.....+.
T Consensus 114 ~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 147 (480)
T 3t5a_A 114 VPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVV 147 (480)
T ss_dssp SCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHH
T ss_pred CCCccchHHHHHHHHHhCCCCEEEeChhHHHHHH
Confidence 3 45788889999999999998877665554
No 55
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=74.38 E-value=8.4 Score=37.51 Aligned_cols=85 Identities=6% Similarity=-0.057 Sum_probs=61.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEecCCCCChh---------------
Q psy9226 45 EWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLEN--RPEFVCLWLGLSKLGVITALINHNLRQN--------------- 107 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~--------------- 107 (548)
.+|.+.+...+..++..+...|+.++|++..+++- ..-.+...+.+...|+.+++.. +.+.
T Consensus 110 ~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~--~dp~~~~~~~~~~~~~~~~ 187 (369)
T 3hgu_A 110 VAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID--IDPRWVKRSLSEGDTATVR 187 (369)
T ss_dssp EECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC--CCHHHHHHHHHTTCHHHHH
T ss_pred EECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc--CChHHHHHhhcccchhhhH
Confidence 57899998888877777777899999999998876 2233445556688899555543 2333
Q ss_pred --------HHHHHHHHhCeeEEEeCccchHHH
Q psy9226 108 --------SLLHCINIAGVSAFIYGAELTDAV 131 (548)
Q Consensus 108 --------~~~~~l~~~~~~~ii~~~~~~~~~ 131 (548)
.+...+++.++.+++..+.....+
T Consensus 188 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l 219 (369)
T 3hgu_A 188 KYTHHLVDQVQNTLMNQDIRFLVTTPPVLREL 219 (369)
T ss_dssp HHHHHHHHHHHHHHHHSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 666688999999999887655443
No 56
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=73.61 E-value=37 Score=35.26 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=73.2
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---h-CCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---I-GFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~-~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
.++.++++.... .| ....+|.+.+...+..+... . ++.++|++...++-+..+ +..+++++..|+..+..
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Ga~~vpl 129 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEW--WLVILGCIRAGLIFMPG 129 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHH--HHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEec
Confidence 457777764321 12 23578999998776665554 3 788999999998865543 56688999999998876
Q ss_pred C-CCCHHHHHHHHhhcCccEEEecHHHHHHH
Q psy9226 259 K-KFSASNYFSDVCKYKCTVGQYIGEMCRYL 288 (548)
Q Consensus 259 ~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 288 (548)
+ ...++++...+++.++..++..+.....+
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 130 TIQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred CCCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 5 56788899999999999988877655444
No 57
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=71.96 E-value=36 Score=34.57 Aligned_cols=97 Identities=9% Similarity=0.058 Sum_probs=69.5
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.++++.. .+ +..+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..+
T Consensus 15 ~p~~~a~~~~---~~----~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~ 85 (504)
T 1t5h_X 15 APDHCALAVP---AR----GLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADV--VIAILALHRLGAVPALLN 85 (504)
T ss_dssp CTTSEEEEET---TT----TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHH--HHHHHHHHHHTCEEEEEC
T ss_pred CCCceEEEEc---CC----CceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCcEEEecC
Confidence 4566666542 11 2568999988766655444 5789999999998865543 566889999999988765
Q ss_pred -CCCHHHHHHHHhhcCccEEEe--cHHHHHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQY--IGEMCRYL 288 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~--~P~~l~~l 288 (548)
...++++...+++.+++.++. .+.....+
T Consensus 86 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 86 PRLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred CccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 567889999999999998887 55544443
No 58
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=71.21 E-value=39 Score=35.00 Aligned_cols=95 Identities=8% Similarity=-0.042 Sum_probs=71.1
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.+|++. . .-.+|.+.+...+..+... .++.++|++...++-+.- ++..+++++..|+..+..+
T Consensus 52 ~p~~~Al~~-~--------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vpl~ 120 (563)
T 1amu_A 52 RPNNVAIVC-E--------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSID--LFIGILAVLKAGGAYVPID 120 (563)
T ss_dssp CTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH--HHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEe-C--------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEeC
Confidence 456676653 1 1368999887766654444 588999999999886544 3566889999999998765
Q ss_pred -CCCHHHHHHHHhhcCccEEEecHHHHHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIGEMCRYL 288 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 288 (548)
...++++...+++.++..++..+.....+
T Consensus 121 ~~~~~~~l~~il~~~~~~~li~~~~~~~~~ 150 (563)
T 1amu_A 121 IEYPKERIQYILDDSQARMLLTQKHLVHLI 150 (563)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred CCCcHHHHHHHHHhcCCCEEEEcCchhhhh
Confidence 56788999999999999999887665443
No 59
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=70.59 E-value=42 Score=35.49 Aligned_cols=95 Identities=14% Similarity=0.049 Sum_probs=70.4
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHH---HhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAY---QIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.+|++.. +..+| ..-.+|.+.+...+..+.. ..++.++|++...+|.+.-+ +..+++++..|+..+...
T Consensus 89 ~pd~~Al~~~-~~~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~--vva~lA~~~~Gav~vpl~ 163 (652)
T 1pg4_A 89 NGDRTAIIWE-GDDTS--QSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEA--AVAMLACARIGAVHSVIF 163 (652)
T ss_dssp HTTSEEEEEE-CSSTT--CEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECC
T ss_pred CCCceEEEEE-cCCCC--ceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCcEEEecC
Confidence 3577777643 22222 2356899998876655444 45899999999999976554 567889999999988765
Q ss_pred -CCCHHHHHHHHhhcCccEEEecH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIG 282 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P 282 (548)
.+.++++...+++.++..+++..
T Consensus 164 ~~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 164 GGFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcC
Confidence 67899999999999999887653
No 60
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=69.04 E-value=39 Score=35.15 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=71.2
Q ss_pred cCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 182 VGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
..++.+|++..... | ....+|.+.+...+..+... .+++++|++...++-+.-+ +..+++++..|+..+..
T Consensus 68 ~~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~--~~~~lA~~~~Gav~vpl 141 (580)
T 3etc_A 68 DSPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDF--WYCMLGLHKLGAIAVPA 141 (580)
T ss_dssp HCTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHH--HHHHHHHHHHTCEEEEC
T ss_pred hCCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhCCEEEEeC
Confidence 35678887764321 2 24678999988766654444 5899999999999865543 56788999999999876
Q ss_pred C-CCCHHHHHHHHhhcCccEEEecH
Q psy9226 259 K-KFSASNYFSDVCKYKCTVGQYIG 282 (548)
Q Consensus 259 ~-~~~~~~~~~~i~~~~vt~l~~~P 282 (548)
+ ...+.++...+++.++..++..+
T Consensus 142 ~~~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 142 THMLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp CTTCCHHHHHHHHHHHTCCEEEEES
T ss_pred CccCCHHHHHHHHHhcCCCEEEEec
Confidence 5 56888999999999999888654
No 61
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=68.82 E-value=32 Score=35.10 Aligned_cols=95 Identities=13% Similarity=0.007 Sum_probs=70.6
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.++++.. + +...+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..+
T Consensus 29 ~p~~~A~~~~--~-----~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~ 99 (517)
T 3r44_A 29 SPRLQAYVEP--S-----TDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEF--CCLFYGAAKLGAVAVPIN 99 (517)
T ss_dssp STTSEEEEEG--G-----GTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECC
T ss_pred CCCCeEEEeC--C-----cCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHH--HHHHHHHHHhCcEEEecC
Confidence 4566666542 1 22468999988766655544 5789999999999865544 567889999999999765
Q ss_pred -CCCHHHHHHHHhhcCccEEEecHHHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIGEMCR 286 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P~~l~ 286 (548)
.....++...+++.++..++..+....
T Consensus 100 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (517)
T 3r44_A 100 TRLAAPEVSFILSDSGSKVVIYGAPSAP 127 (517)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHH
T ss_pred cccCHHHHHHHHHhcCceEEEECCchHH
Confidence 568888999999999999887665443
No 62
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=68.26 E-value=29 Score=35.50 Aligned_cols=82 Identities=11% Similarity=0.083 Sum_probs=64.0
Q ss_pred EEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC-CCCHHHHHHHHhhcCccEEE
Q psy9226 204 VISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK-KFSASNYFSDVCKYKCTVGQ 279 (548)
Q Consensus 204 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~-~~~~~~~~~~i~~~~vt~l~ 279 (548)
.+|.+.+...+..+... .++.++|++...++-+..+ +..+++++..|+..+..+ ...+.++...+++.++..++
T Consensus 48 ~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 125 (529)
T 2v7b_A 48 STTYGELEERARRFASALRTLGVHPEERILLVMLDTVAL--PVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVI 125 (529)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEE
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeEEE
Confidence 58999888766655544 5789999999998865543 566789999999988765 56788999999999999988
Q ss_pred ecHHHHHH
Q psy9226 280 YIGEMCRY 287 (548)
Q Consensus 280 ~~P~~l~~ 287 (548)
..+.....
T Consensus 126 ~~~~~~~~ 133 (529)
T 2v7b_A 126 ASGALVQN 133 (529)
T ss_dssp EEGGGHHH
T ss_pred echhhhhH
Confidence 87765443
No 63
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=67.73 E-value=61 Score=33.54 Aligned_cols=101 Identities=14% Similarity=0.003 Sum_probs=73.9
Q ss_pred cCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 182 VGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
..++.+|++....+ ..-.+|.+.+...+..+... .++.++|++...++-+..+ +..+++++..|+..+..
T Consensus 23 ~~p~~~a~~~~~~~-----~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl 95 (590)
T 3kxw_A 23 HSPNKKSCTFLNKE-----LEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPL--IQAFLGCLYAGCIAVPI 95 (590)
T ss_dssp HCTTSEEEEEEETT-----EEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEE
T ss_pred hCCCCeEEEEEcCC-----eeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH--HHHHHHHHHhCcEEEEe
Confidence 34577777654411 23578999988766655444 5788999999999865543 56688999999999876
Q ss_pred CCC----CHHHHHHHHhhcCccEEEecHHHHHHHh
Q psy9226 259 KKF----SASNYFSDVCKYKCTVGQYIGEMCRYLL 289 (548)
Q Consensus 259 ~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 289 (548)
+.. ....+...++..++..+...+.....+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (590)
T 3kxw_A 96 YPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFT 130 (590)
T ss_dssp CCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHC
T ss_pred cCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHH
Confidence 643 3467778888899999998888776664
No 64
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=65.72 E-value=47 Score=35.24 Aligned_cols=96 Identities=16% Similarity=0.108 Sum_probs=71.0
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHH----HhCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAY----QIGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
.++.+|++... ..+| ....+|.+.+...+..+.. ..+++++|++...+|.+.-+ +..+++++..|+..+..
T Consensus 95 ~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~--v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEA--IITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHH--HHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEee
Confidence 35677776432 2222 2356899998876665444 45688999999999976554 56788999999998876
Q ss_pred C-CCCHHHHHHHHhhcCccEEEecHH
Q psy9226 259 K-KFSASNYFSDVCKYKCTVGQYIGE 283 (548)
Q Consensus 259 ~-~~~~~~~~~~i~~~~vt~l~~~P~ 283 (548)
. .+.++++...+++.++.++++...
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEccc
Confidence 5 678999999999999999887543
No 65
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=64.20 E-value=51 Score=31.55 Aligned_cols=90 Identities=14% Similarity=0.020 Sum_probs=61.5
Q ss_pred CceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHH
Q psy9226 35 NKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLH 111 (548)
Q Consensus 35 ~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 111 (548)
.++.+..+ +.+=||++-. +......+.+.|. ++|+.|.+....+-....+.++|...|..++.+-|...+..-..
T Consensus 35 ~~i~~K~E~~~ptGSfK~R~--a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 112 (334)
T 3tbh_A 35 AKVVLKMECENPMASVKDRL--GFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRC 112 (334)
T ss_dssp SEEEEEEGGGSTTSBTHHHH--HHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred CEEEEEeCCCCCccCcHHHH--HHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHH
Confidence 34555554 3344565532 2222233445554 88888756666677888889999999999887766666666778
Q ss_pred HHHHhCeeEEEeCcc
Q psy9226 112 CINIAGVSAFIYGAE 126 (548)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (548)
.++..++++++++..
T Consensus 113 ~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 113 LLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHCCCEEEEECCC
Confidence 889999999999864
No 66
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=63.87 E-value=34 Score=34.80 Aligned_cols=79 Identities=11% Similarity=-0.028 Sum_probs=63.0
Q ss_pred EEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC-CCCHHHHHHHHhhcCccEEE
Q psy9226 204 VISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK-KFSASNYFSDVCKYKCTVGQ 279 (548)
Q Consensus 204 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~-~~~~~~~~~~i~~~~vt~l~ 279 (548)
.+|.+.+...+..+... .++.++|++...++-+..+ +..+++++..|+..+..+ ....+++...+++.++..++
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi 105 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEA--LVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVV 105 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHH--HHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEE
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 58999988766655544 4789999999999866544 567889999999998765 56888999999999999988
Q ss_pred ecHHH
Q psy9226 280 YIGEM 284 (548)
Q Consensus 280 ~~P~~ 284 (548)
..+..
T Consensus 106 ~~~~~ 110 (503)
T 4fuq_A 106 CDPSK 110 (503)
T ss_dssp ECGGG
T ss_pred ECchh
Confidence 77643
No 67
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=63.72 E-value=53 Score=33.95 Aligned_cols=91 Identities=8% Similarity=-0.031 Sum_probs=68.8
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.+|++. . .-.+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..+
T Consensus 88 ~pd~~A~~~-~--------~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~vpl~ 156 (570)
T 4gr5_A 88 APDAVALLH-E--------ADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDM--VVALLAVLKAGGGYTMLD 156 (570)
T ss_dssp CTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEC-C--------CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHHCCEEEEcC
Confidence 456777653 1 1358999987766654444 5789999999999865554 567889999999998765
Q ss_pred -CCCHHHHHHHHhhcCccEEEecHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIGEM 284 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P~~ 284 (548)
...++++...+++.++..++.....
T Consensus 157 ~~~~~~~l~~~l~~~~~~~~i~~~~~ 182 (570)
T 4gr5_A 157 PQFPVERLALSLEDTGAPLLVTSRPL 182 (570)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECTTT
T ss_pred CCChHHHHHHHHHhcCCCEEEecchh
Confidence 5688899999999999988876543
No 68
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=63.15 E-value=1.2e+02 Score=31.61 Aligned_cols=97 Identities=9% Similarity=-0.012 Sum_probs=71.2
Q ss_pred CCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HH-HHHHHHHcCcEEEecC
Q psy9226 34 PNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEF--VC-LWLGLSKLGVITALIN 101 (548)
Q Consensus 34 p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~--~~-~~lA~~~~G~~~v~l~ 101 (548)
|+.+|++.. +-.+|.+.+...+......+ ++.+++++...++-...+ .. .+++++..|+..+..+
T Consensus 183 ~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~ 259 (617)
T 3rg2_A 183 ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC---QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAA 259 (617)
T ss_dssp TTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECS
T ss_pred CCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhc---CCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeC
Confidence 466776654 23689998887776665544 788999999888754333 22 4788888899888765
Q ss_pred CCCChhHHHHHHHHhCeeEEEeCccchHHHHHH
Q psy9226 102 HNLRQNSLLHCINIAGVSAFIYGAELTDAVQEI 134 (548)
Q Consensus 102 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 134 (548)
. .....+...+++.++..+...+.....+.+.
T Consensus 260 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 291 (617)
T 3rg2_A 260 D-PSATLCFPLIEKHQVNVTALVPPAVSLWLQA 291 (617)
T ss_dssp S-CCHHHHHHHHHHTTCCEEEECHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHhCCcEEEcchHHHHHHHHh
Confidence 4 5677888899999999999988766665543
No 69
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=62.10 E-value=43 Score=32.28 Aligned_cols=105 Identities=10% Similarity=-0.004 Sum_probs=67.5
Q ss_pred HHHHHHHHHhhCCCceEEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcC
Q psy9226 22 IADIFREHAVRSPNKVIFMFE------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRP-EFVCLWLGLSKLG 94 (548)
Q Consensus 22 l~~~l~~~~~~~p~~~al~~~------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G 94 (548)
..+.+.++....|.-+.+... +-.+|++.+...+..++.. .++.++|++...+|-.. ..+..++..+..|
T Consensus 27 ~~~~~~~w~~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g 103 (358)
T 4gs5_A 27 AYDFMEKWLGGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKA---LSLGPGTRALVCLNVGYIAGLMMLVRGMELD 103 (358)
T ss_dssp HHHHHHHHHHTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHHHHHHHHHT
T ss_pred hhhHhhccCCCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHH---hCCCCCCEEEEECChHHHHHHHHHHHHHHhC
Confidence 344555555544444444433 2368999988777666554 47899999988887643 3344556667778
Q ss_pred cEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHH
Q psy9226 95 VITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQ 132 (548)
Q Consensus 95 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 132 (548)
+..+...+.... ...+++.++..+...+.....+.
T Consensus 104 ~~~~~~~~~~~~---~~~i~~~~~t~~~~~P~~l~~ll 138 (358)
T 4gs5_A 104 WELTVTEPTANP---LAGLDHADFDFVAMVPMQLQSIL 138 (358)
T ss_dssp CEEEEECCCSCT---TTTCSSCCCSEEEECHHHHHHHH
T ss_pred cEEEecCccccH---HHHHHHhCCeEEEcChHHHHHhh
Confidence 887777664332 34677888999888776555443
No 70
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=61.10 E-value=29 Score=35.34 Aligned_cols=96 Identities=8% Similarity=0.052 Sum_probs=70.1
Q ss_pred CCCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEecCC
Q psy9226 33 SPNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRP-EFVCLWLGLSKLGVITALINH 102 (548)
Q Consensus 33 ~p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 102 (548)
.++.+|++.. +-.+|++.+...+...... .++.++|++...+|-+. -.+..+++++..|+..+.++.
T Consensus 142 ~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 218 (512)
T 3fce_A 142 KGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVED---FNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDK 218 (512)
T ss_dssp CTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHH---TTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHh---cCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCH
Confidence 3566666654 2358998888766655443 47889999998887653 234557888889999988765
Q ss_pred C--CChhHHHHHHHHhCeeEEEeCccchHHH
Q psy9226 103 N--LRQNSLLHCINIAGVSAFIYGAELTDAV 131 (548)
Q Consensus 103 ~--~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 131 (548)
. ..+..+...+++.++..++..+.....+
T Consensus 219 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 249 (512)
T 3fce_A 219 DMIARPKDLFASLEQSDIQVWTSTPSFAEMC 249 (512)
T ss_dssp HHHHSHHHHHHHHHHHCCCEEEECHHHHHHH
T ss_pred HHhhCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 3 4678889999999999999887655433
No 71
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=59.75 E-value=37 Score=34.60 Aligned_cols=96 Identities=6% Similarity=0.096 Sum_probs=70.0
Q ss_pred CCCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEecCC
Q psy9226 33 SPNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPE-FVCLWLGLSKLGVITALINH 102 (548)
Q Consensus 33 ~p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 102 (548)
.++.+|++.. +-.+|.+.+...+..++.. .++.+++++...+|-+.. .+..+++++..|+..+.++.
T Consensus 141 ~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 217 (511)
T 3e7w_A 141 KEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICAD---FPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTK 217 (511)
T ss_dssp CTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHH---STTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---cCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcCh
Confidence 3456666654 2358998888776655443 478889999888876543 34557888899999887765
Q ss_pred C--CChhHHHHHHHHhCeeEEEeCccchHHH
Q psy9226 103 N--LRQNSLLHCINIAGVSAFIYGAELTDAV 131 (548)
Q Consensus 103 ~--~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 131 (548)
. ..+..+...+++.++..++..+.....+
T Consensus 218 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 248 (511)
T 3e7w_A 218 DAVNKPKVLFEELKKSGLNVWTSTPSFVQMC 248 (511)
T ss_dssp HHHHSHHHHHHHHHHHCCSEEEECHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 3 4678888999999999999888655443
No 72
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=56.47 E-value=31 Score=38.64 Aligned_cols=94 Identities=13% Similarity=0.032 Sum_probs=70.6
Q ss_pred cCCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEc
Q psy9226 182 VGVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIR 258 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~ 258 (548)
..++.+|++.. .+| -.+|.+.+...+..+... .++.++|++...++-+.- ++..+++++..|+..+..
T Consensus 73 ~~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e--~~v~~lA~~~~Ga~~vpl 143 (979)
T 3tsy_A 73 EFATKPCLING---PTG----HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPE--FVLSFLAASFRGATATAA 143 (979)
T ss_dssp GTTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHH--HHHHHHHHHHHTCEEEEE
T ss_pred hCCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHH--HHHHHHHHHHcCCEEEee
Confidence 34677777642 222 358999888766655444 578999999999996644 466788999999998876
Q ss_pred C-CCCHHHHHHHHhhcCccEEEecHHH
Q psy9226 259 K-KFSASNYFSDVCKYKCTVGQYIGEM 284 (548)
Q Consensus 259 ~-~~~~~~~~~~i~~~~vt~l~~~P~~ 284 (548)
+ ...++++...+++.++..++..+.+
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~vi~~~~~ 170 (979)
T 3tsy_A 144 NPFFTPAEIAKQAKASNTKLIITEARY 170 (979)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECSTT
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEChHH
Confidence 5 6788999999999999998877654
No 73
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=55.52 E-value=62 Score=33.30 Aligned_cols=84 Identities=8% Similarity=-0.089 Sum_probs=63.9
Q ss_pred EEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcCC-CC-------HHHHHHHHh
Q psy9226 203 AVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRKK-FS-------ASNYFSDVC 271 (548)
Q Consensus 203 V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~~-~~-------~~~~~~~i~ 271 (548)
-.+|.+.+...+..+... .++.++|++...++-+.-+ +..+++++..|+..+..+. .. ..++...++
T Consensus 48 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~ 125 (576)
T 3gqw_A 48 DQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEF--VEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLA 125 (576)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHH
Confidence 468999988776655544 5789999999999865543 5678899999999987653 33 578888889
Q ss_pred hcCccEEEecHHHHHHH
Q psy9226 272 KYKCTVGQYIGEMCRYL 288 (548)
Q Consensus 272 ~~~vt~l~~~P~~l~~l 288 (548)
+.++..++........+
T Consensus 126 ~~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 126 SCQPAAIITGDEWLPLV 142 (576)
T ss_dssp HHCCSEEEECGGGHHHH
T ss_pred hcCCCEEEecHHHHHHH
Confidence 99999988876654443
No 74
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=49.65 E-value=1.6e+02 Score=30.18 Aligned_cols=97 Identities=9% Similarity=-0.076 Sum_probs=67.7
Q ss_pred cCCCCeEEEEEecCCCCCc--ceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEE
Q psy9226 182 VGVQDKLIYIYTSGTTGLP--KAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVV 256 (548)
Q Consensus 182 ~~~~~~a~i~~TSGTTG~P--K~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v 256 (548)
..++.+|++...+ ..+.. ..-.+|.+.+...+..+... .+. ++|++...++-+..+ +..+++++..|+..+
T Consensus 32 ~~p~~~A~~~~~~-~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~--~~~~lA~~~~Gav~v 107 (562)
T 3ite_A 32 THPEWKAVEVATG-FLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIA--FAIIVGIMKSGNTYV 107 (562)
T ss_dssp HCTTSEEEEEEEC-C-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHH--HHHHHHHHHTTCEEE
T ss_pred HCCCchhhhcccc-cccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHH--HHHHHHHHHhCCEEE
Confidence 3467777765432 22222 23568999988776655544 356 699999998866554 566889999999998
Q ss_pred EcC-CCCHHHHHHHHhhcCccEEEecH
Q psy9226 257 IRK-KFSASNYFSDVCKYKCTVGQYIG 282 (548)
Q Consensus 257 ~~~-~~~~~~~~~~i~~~~vt~l~~~P 282 (548)
..+ ...+.++...+++.++..++...
T Consensus 108 pl~~~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 108 PIEAGLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp ECCTTSCHHHHHHHHHHHTCSEEEECT
T ss_pred ecCCcCHHHHHHHHHHhcCCCEEEEcc
Confidence 765 56788899999998988877653
No 75
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=49.44 E-value=1.1e+02 Score=31.06 Aligned_cols=96 Identities=9% Similarity=0.043 Sum_probs=68.7
Q ss_pred CCCceEEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCcEEEecC
Q psy9226 33 SPNKVIFMFE---------NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPE--FVCLWLGLSKLGVITALIN 101 (548)
Q Consensus 33 ~p~~~al~~~---------~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 101 (548)
.++.+|++.. +-.+|.+.+...+..++..+ ++.++|++...++-... ++..+++.+..|+..+...
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (505)
T 3nyq_A 153 DDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG 229 (505)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS
T ss_pred CCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC
Confidence 4566676654 23689999988887776655 78889988887775432 2335788889999988765
Q ss_pred CCCChhHHHHHHHHhCeeEEEeCccchHHHHH
Q psy9226 102 HNLRQNSLLHCINIAGVSAFIYGAELTDAVQE 133 (548)
Q Consensus 102 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~ 133 (548)
...++.+...+ +.++..++..+.....+.+
T Consensus 230 -~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~ 259 (505)
T 3nyq_A 230 -RFSTEGAAREL-NDGATMLFGVPTMYHRIAE 259 (505)
T ss_dssp -SCCHHHHHHHH-TTTCCEEEECHHHHHHHHH
T ss_pred -CCChHHHHHHH-hhCCeEEEehHHHHHHHHH
Confidence 45677777777 6789999888876655544
No 76
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=47.26 E-value=56 Score=33.20 Aligned_cols=77 Identities=8% Similarity=-0.158 Sum_probs=59.7
Q ss_pred EEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC-CCCHHHHHHHHhhcCccEEE
Q psy9226 204 VISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK-KFSASNYFSDVCKYKCTVGQ 279 (548)
Q Consensus 204 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~-~~~~~~~~~~i~~~~vt~l~ 279 (548)
.+|.+.+...+..+... .++.++|++...++-+.- ++..+++++..|+..+..+ ...++++...+++.++..++
T Consensus 29 ~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii 106 (521)
T 3l8c_A 29 RRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYD--MLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLII 106 (521)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHH--HHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEE
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEE
Confidence 47999887766655444 578899999888886544 3566789999999888654 67889999999999999887
Q ss_pred ecH
Q psy9226 280 YIG 282 (548)
Q Consensus 280 ~~P 282 (548)
...
T Consensus 107 ~~~ 109 (521)
T 3l8c_A 107 AIE 109 (521)
T ss_dssp ESS
T ss_pred ecC
Confidence 643
No 77
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=46.58 E-value=94 Score=29.78 Aligned_cols=89 Identities=7% Similarity=-0.028 Sum_probs=62.8
Q ss_pred ceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHH
Q psy9226 36 KVIFMFE--NTEWTAQQVEAYSNRVANFFLAQG-LKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHC 112 (548)
Q Consensus 36 ~~al~~~--~~~~Ty~el~~~v~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 112 (548)
++.+..+ +.+=||++=- -...+.. +.+.| +++|++.++.....-....+.++|.++|..++.+=|...+..-...
T Consensus 51 ~IylK~E~lnptGSfK~Rg-A~~~i~~-a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~ 128 (344)
T 3vc3_A 51 YVAVKQEMMQPTASIADRP-AYAMITD-AEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVT 128 (344)
T ss_dssp EEEEEEGGGSTTSBTTHHH-HHHHHHH-HHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred EEEEEecCCCCCCCcHHHH-HHHHHHH-HHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHH
Confidence 4555554 3344665421 1223333 33444 5778777777778888999999999999999888777777777888
Q ss_pred HHHhCeeEEEeCcc
Q psy9226 113 INIAGVSAFIYGAE 126 (548)
Q Consensus 113 l~~~~~~~ii~~~~ 126 (548)
++..++++++++..
T Consensus 129 ~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 129 MRAFGAELILTDPA 142 (344)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHcCCEEEEECCC
Confidence 99999999999764
No 78
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=41.67 E-value=1.1e+02 Score=31.96 Aligned_cols=88 Identities=8% Similarity=-0.097 Sum_probs=65.3
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.|+.+|++. . .-.+|.+.+...+..+... .++.++|++...++-+..+ +..+++++..|+..+..+
T Consensus 40 ~Pd~~Av~~-~--------~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~--vva~lailkaGa~~vpld 108 (620)
T 4dg8_A 40 HPHREAIRD-R--------FGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRES--ITCLLAILLSGHHYLYID 108 (620)
T ss_dssp CTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHH--HHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEc-C--------CCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEeeC
Confidence 456776653 1 1258999887766655444 5889999999998865443 667889999999999876
Q ss_pred -CCCHHHHHHHHhhcCccEEEec
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYI 281 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~ 281 (548)
....+++...+++.++..+...
T Consensus 109 ~~~p~~~l~~il~~~~~~~vl~~ 131 (620)
T 4dg8_A 109 LKQPAAWNAELCRQVDCRLILDC 131 (620)
T ss_dssp TTSCHHHHHHHHHHHTEEEEEEC
T ss_pred ccChHHHHHHHHHhCCCcEEEec
Confidence 4577888888888888887744
No 79
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=40.54 E-value=1.4e+02 Score=28.14 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=57.9
Q ss_pred CceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHH
Q psy9226 35 NKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLH 111 (548)
Q Consensus 35 ~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 111 (548)
.++.+..+ +.+-||++-... .....+.+.|. ++|+..++....+-....+.++|.+.|..++.+-|...+..-..
T Consensus 30 ~~v~~K~E~~~ptGSfK~R~a~--~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 107 (322)
T 1z7w_A 30 GRVAAKLEMMEPCSSVKDRIGF--SMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRI 107 (322)
T ss_dssp SEEEEEEGGGSTTSBTHHHHHH--HHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred ceEEEEecccCCCCchHHHHHH--HHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHH
Confidence 34555454 334455543221 22223345553 56654444566677888888889999999887766555666677
Q ss_pred HHHHhCeeEEEeCcc
Q psy9226 112 CINIAGVSAFIYGAE 126 (548)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (548)
.++..++++++++.+
T Consensus 108 ~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 108 ILLAFGVELVLTDPA 122 (322)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEeCCC
Confidence 889999999999864
No 80
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=39.67 E-value=2.4e+02 Score=26.30 Aligned_cols=88 Identities=10% Similarity=-0.001 Sum_probs=57.1
Q ss_pred ceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHH
Q psy9226 36 KVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHC 112 (548)
Q Consensus 36 ~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 112 (548)
++.+..+ +.+-||++-.. ..+...+.+.|. ++|+.|+. ...+-....+.++|.+.|..++.+-|...+..-...
T Consensus 32 ~i~~K~E~~~ptgSfK~R~a--~~~l~~a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 108 (313)
T 2q3b_A 32 DIVAKLEFFNPANSVKDRIG--VAMLQAAEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRML 108 (313)
T ss_dssp EEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred EEEEEehhcCCCCcHHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 4555444 33446665332 223333444554 56666555 566667777888888999988877665555666778
Q ss_pred HHHhCeeEEEeCcc
Q psy9226 113 INIAGVSAFIYGAE 126 (548)
Q Consensus 113 l~~~~~~~ii~~~~ 126 (548)
++..++++++++.+
T Consensus 109 ~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 109 LRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHCCCEEEEeCCC
Confidence 88999999999863
No 81
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=39.21 E-value=1.4e+02 Score=29.62 Aligned_cols=64 Identities=13% Similarity=-0.005 Sum_probs=50.2
Q ss_pred HHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCc
Q psy9226 62 FLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGA 125 (548)
Q Consensus 62 L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~ 125 (548)
..+.|. ++|...++....+-....+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 165 A~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 345564 6775556666668888888999999999988776666667777889999999999975
No 82
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=36.72 E-value=85 Score=29.86 Aligned_cols=78 Identities=12% Similarity=0.103 Sum_probs=52.5
Q ss_pred eeeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEE
Q psy9226 45 EWTAQQVEAYSNRVA---NFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAF 121 (548)
Q Consensus 45 ~~Ty~el~~~v~~la---~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 121 (548)
.+++.+......... ..+...++++|++|+|+..-+.-.+++++|....|+.++.++.+ ++-..+++...++.+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~---~~r~~~~~~~Ga~~~ 212 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN---QDKLNLAKKIGADVT 212 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC---HHHHHHHHHTTCSEE
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc---HHHhhhhhhcCCeEE
Confidence 457776544433322 23455689999999999887777777777777778887776653 333566778888877
Q ss_pred EeCc
Q psy9226 122 IYGA 125 (548)
Q Consensus 122 i~~~ 125 (548)
+-..
T Consensus 213 i~~~ 216 (348)
T 4eez_A 213 INSG 216 (348)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 7543
No 83
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=35.14 E-value=2.6e+02 Score=25.89 Aligned_cols=89 Identities=13% Similarity=0.074 Sum_probs=56.5
Q ss_pred CceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHH
Q psy9226 35 NKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLH 111 (548)
Q Consensus 35 ~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 111 (548)
.++.+..+ +.+-||++-... .+...+.+.|. ++|+.|+. ...+-....+.++|...|..++.+-|...+..-..
T Consensus 29 ~~i~~K~E~~~ptgSfK~R~a~--~~l~~a~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 105 (308)
T 2egu_A 29 ADVYLKLEFMNPGSSVKDRIAL--AMIEAAEKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRN 105 (308)
T ss_dssp CEEEEEEGGGSTTSBTHHHHHH--HHHHHHHHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHH
T ss_pred CEEEEEecccCCCCChHHHHHH--HHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 34555444 334455544322 22233444454 56665544 55566777788888899998887766555566677
Q ss_pred HHHHhCeeEEEeCcc
Q psy9226 112 CINIAGVSAFIYGAE 126 (548)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (548)
.++..++++++++.+
T Consensus 106 ~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 106 LLRAYGAELVLTPGA 120 (308)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEECCC
Confidence 889999999999864
No 84
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=34.78 E-value=2.5e+02 Score=26.65 Aligned_cols=88 Identities=9% Similarity=0.058 Sum_probs=56.1
Q ss_pred ceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHH
Q psy9226 36 KVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHC 112 (548)
Q Consensus 36 ~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 112 (548)
++.+..+ +.+-||++-.. ..+...+.+.|. ++|+.|+.. ..+-....+.++|...|..++.+-|...+..-...
T Consensus 43 ~v~~K~E~~~ptGSfKdR~a--~~~l~~a~~~g~~~~g~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~ 119 (343)
T 2pqm_A 43 RILVKLEYFNPMSSVKDRVG--FNIVYQAIKDGRLKPGMEIIES-TSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMI 119 (343)
T ss_dssp EEEEEEGGGSTTSBTHHHHH--HHHHHHHHHHTSSCTTCEEEEE-CSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHH
T ss_pred EEEEEeccCCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEEEE-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 4555444 33445554422 222233334453 667665555 44667777778888899988877665556667778
Q ss_pred HHHhCeeEEEeCcc
Q psy9226 113 INIAGVSAFIYGAE 126 (548)
Q Consensus 113 l~~~~~~~ii~~~~ 126 (548)
++..++++++++..
T Consensus 120 ~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 120 MKAFGAELILTEGK 133 (343)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHCCCEEEEECCC
Confidence 89999999999864
No 85
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=34.62 E-value=92 Score=29.87 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=43.9
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccch
Q psy9226 70 GDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELT 128 (548)
Q Consensus 70 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~ 128 (548)
.+.| +....+-....+.++|.+.|..++.+-|...+..-...++..++++++++....
T Consensus 76 ~~~v-v~~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~~ 133 (346)
T 3l6b_A 76 PKAV-VTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDE 133 (346)
T ss_dssp CSCE-EEECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEE-EEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 3444 344557777888888999999888776666666778889999999999987643
No 86
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=34.36 E-value=3e+02 Score=25.86 Aligned_cols=64 Identities=14% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCcc
Q psy9226 62 FLAQG-LKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAE 126 (548)
Q Consensus 62 L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 126 (548)
+.+.| +++++.|+-. ..+-....+.++|.+.|..++.+-|...+..-...++..++++++++.+
T Consensus 64 a~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 64 AEADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34455 4667766554 5577788888888999999887766666667778889999999999863
No 87
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=30.64 E-value=3.3e+02 Score=25.33 Aligned_cols=89 Identities=12% Similarity=0.049 Sum_probs=57.2
Q ss_pred CceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHH
Q psy9226 35 NKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLH 111 (548)
Q Consensus 35 ~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 111 (548)
.++.+..+ +.+-||++-.. ..+...+.+.|. ++|+.|+ ....+-....+.++|.+.|..++.+-|...+..-..
T Consensus 26 ~~i~~K~E~~~ptGSfK~R~a--~~~i~~a~~~g~~~~~~~vv-~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 102 (316)
T 1y7l_A 26 GNVVVKIEGRNPSYSVKCRIG--ANMVWQAEKDGTLTKGKEIV-DATSGNTGIALAYVAAARGYKITLTMPETMSLERKR 102 (316)
T ss_dssp TCEEEEETTSSGGGBTHHHHH--HHHHHHHHHTTSSCTTCEEE-ESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHH
T ss_pred CEEEEEeccCCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEE-EeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 34666555 33445555433 222233444554 5565444 445577777888888899998877665555666677
Q ss_pred HHHHhCeeEEEeCcc
Q psy9226 112 CINIAGVSAFIYGAE 126 (548)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (548)
.++..++++++++.+
T Consensus 103 ~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 103 LLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEeCCC
Confidence 889999999999874
No 88
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=30.48 E-value=1.4e+02 Score=27.87 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=48.1
Q ss_pred eeeHHHHHHHHHHH--H-HHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEE
Q psy9226 45 EWTAQQVEAYSNRV--A-NFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAF 121 (548)
Q Consensus 45 ~~Ty~el~~~v~~l--a-~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 121 (548)
.+++.+........ | ..|...++++|++|+|....+.--.++...+...|+.++.+. +.++ ..++++.+++.+
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~---~~~~-~~~~~~lGa~~~ 200 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA---SKRN-HAFLKALGAEQC 200 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---CHHH-HHHHHHHTCSEE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe---ccch-HHHHHHcCCCEE
Confidence 45777765443221 2 234556899999999997566555555555567798776553 3444 566777888776
Q ss_pred EeC
Q psy9226 122 IYG 124 (548)
Q Consensus 122 i~~ 124 (548)
+-.
T Consensus 201 i~~ 203 (321)
T 3tqh_A 201 INY 203 (321)
T ss_dssp EET
T ss_pred EeC
Confidence 643
No 89
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=29.32 E-value=1.6e+02 Score=28.25 Aligned_cols=62 Identities=16% Similarity=0.048 Sum_probs=39.7
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CChhHHHHHHHHhC--eeEEEeC
Q psy9226 60 NFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHN-----LRQNSLLHCINIAG--VSAFIYG 124 (548)
Q Consensus 60 ~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~--~~~ii~~ 124 (548)
..|...++++||.|++-.+.... ...++...|+.++.++.+ ...+++...+..-+ +++|+..
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFPA---TPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCTH---HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred HHHHHcCCCCcCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 33445578899998887665443 334566789887766532 36677777664444 7777643
No 90
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=27.29 E-value=3.7e+02 Score=24.79 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=53.2
Q ss_pred ceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHH
Q psy9226 36 KVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHC 112 (548)
Q Consensus 36 ~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 112 (548)
++.+..+ +.+-||++-... .+...+.+.|. +++ ++....+-....+.++|.+.|..++.+-|...+..-...
T Consensus 32 ~v~~K~E~~~ptGSfK~R~a~--~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~ 106 (303)
T 1o58_A 32 RIFLKLEKNNPGGSVKDRPAL--FMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKV 106 (303)
T ss_dssp TEEEEEGGGSTTSBTTHHHHH--HHHHHHHHTTCCTTC---EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHH
T ss_pred eEEEEecCCCCCCChHHHHHH--HHHHHHHHcCCCCCC---EEEECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 4555444 334455543222 22233444453 344 334455667777778888999988776655555666778
Q ss_pred HHHhCeeEEEeCcc
Q psy9226 113 INIAGVSAFIYGAE 126 (548)
Q Consensus 113 l~~~~~~~ii~~~~ 126 (548)
++..++++++++..
T Consensus 107 ~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 107 LKMLGAELVLTPGE 120 (303)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHcCCEEEEECCC
Confidence 89999999998864
No 91
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=26.95 E-value=1.5e+02 Score=27.54 Aligned_cols=73 Identities=16% Similarity=0.070 Sum_probs=47.6
Q ss_pred eeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEE
Q psy9226 45 EWTAQQVEAYSNRVAN---FFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAF 121 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~---~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 121 (548)
.+++.+.......++. .|...++++|++|+|... +.--.++...+...|+.++.+. + ++. ..++++.+++.+
T Consensus 115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~--~~~-~~~~~~lGa~~v 189 (315)
T 3goh_A 115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-A--SLS-QALAAKRGVRHL 189 (315)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-S--SCC-HHHHHHHTEEEE
T ss_pred CCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-C--hhh-HHHHHHcCCCEE
Confidence 4688877533333332 233348899999999999 6555555555566798777666 2 333 345677888888
Q ss_pred E
Q psy9226 122 I 122 (548)
Q Consensus 122 i 122 (548)
+
T Consensus 190 ~ 190 (315)
T 3goh_A 190 Y 190 (315)
T ss_dssp E
T ss_pred E
Confidence 8
No 92
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=26.47 E-value=2.3e+02 Score=26.90 Aligned_cols=79 Identities=18% Similarity=0.136 Sum_probs=47.6
Q ss_pred eeeHHHHHHHH--HHHH-HHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEe-cCCCCChhHHHHHHHHhCee
Q psy9226 45 EWTAQQVEAYS--NRVA-NFFLA-QGLKKGDSVALMLENRPEFVCLWLGLSKLGVITAL-INHNLRQNSLLHCINIAGVS 119 (548)
Q Consensus 45 ~~Ty~el~~~v--~~la-~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~-l~~~~~~~~~~~~l~~~~~~ 119 (548)
.+++.+..... -..| ..|.+ .++++|++|+|....+.--.++...+...|+..+. .+.....++...++++.+++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~ 218 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE 218 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc
Confidence 46777654421 1122 23434 48999999999998555555444445567885543 44433344455677788888
Q ss_pred EEEe
Q psy9226 120 AFIY 123 (548)
Q Consensus 120 ~ii~ 123 (548)
.++.
T Consensus 219 ~vi~ 222 (357)
T 1zsy_A 219 HVIT 222 (357)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8774
No 93
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=26.32 E-value=1.4e+02 Score=28.80 Aligned_cols=60 Identities=12% Similarity=0.115 Sum_probs=45.3
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchH
Q psy9226 70 GDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTD 129 (548)
Q Consensus 70 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 129 (548)
|...++....+-....+.++|.+.|..++.+-|...+......++..++++++++....+
T Consensus 92 g~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~ 151 (364)
T 4h27_A 92 GCAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELLDE 151 (364)
T ss_dssp TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSSTTH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 333445555577778888889999998887766666777788889999999999875443
No 94
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=26.25 E-value=2.6e+02 Score=26.34 Aligned_cols=78 Identities=8% Similarity=-0.013 Sum_probs=48.7
Q ss_pred eeHHHHHHHHHHH---HHHHHHc--CCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeE
Q psy9226 46 WTAQQVEAYSNRV---ANFFLAQ--GLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSA 120 (548)
Q Consensus 46 ~Ty~el~~~v~~l---a~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 120 (548)
+++.+........ -..|.+. ++++|++|++...-..-.+++.+|-..-|+.++.++. .++-..++++.+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCCE
Confidence 7777765333221 1234443 7899999999987555556666665554777776654 233445677888888
Q ss_pred EEeCcc
Q psy9226 121 FIYGAE 126 (548)
Q Consensus 121 ii~~~~ 126 (548)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 775443
No 95
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=26.08 E-value=2.4e+02 Score=32.60 Aligned_cols=91 Identities=11% Similarity=-0.070 Sum_probs=67.8
Q ss_pred CCCCeEEEEEecCCCCCcceEEEechHHHHHHHHHHHH---hCCCCCCEEEEeCCchhHHHHHHHHHHHHHhccEEEEcC
Q psy9226 183 GVQDKLIYIYTSGTTGLPKAAVISNHRYYFLGGAIAYQ---IGFRTKDRFYTPLPLYHTAGGAMCIGQALIFGCCVVIRK 259 (548)
Q Consensus 183 ~~~~~a~i~~TSGTTG~PK~V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~L~~G~~~v~~~ 259 (548)
.++.+|++. . .-.+|.+.+...+..+... .++.+++++...++-+.- ++..+++++..|+..+..+
T Consensus 477 ~p~~~Av~~-~--------~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~--~vv~~lailkaG~~~vpld 545 (1304)
T 2vsq_A 477 NPDAPALTY-S--------GQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLE--LVIGILGVLKAGAAYLPVD 545 (1304)
T ss_dssp CTTSEEEES-S--------SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHH--HHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEE-C--------CeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHH--HHHHHHHHHHHCCEEEEEC
Confidence 466776652 1 1258999887766655544 578999999999886544 4677889999999999776
Q ss_pred -CCCHHHHHHHHhhcCccEEEecHHH
Q psy9226 260 -KFSASNYFSDVCKYKCTVGQYIGEM 284 (548)
Q Consensus 260 -~~~~~~~~~~i~~~~vt~l~~~P~~ 284 (548)
....+++...+++-++..+...+..
T Consensus 546 p~~p~~rl~~il~~~~~~~vl~~~~~ 571 (1304)
T 2vsq_A 546 PKLPEDRISYMLADSAAACLLTHQEM 571 (1304)
T ss_dssp TTSCHHHHHHHHHHHTCCEEEECSTT
T ss_pred CCCHHHHHHHHHHHcCCCEEEECcch
Confidence 4577888888999999988876543
No 96
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=25.79 E-value=4e+02 Score=24.58 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=55.3
Q ss_pred ceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcC-CCCCCE-EEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHH
Q psy9226 36 KVIFMFE--NTEWTAQQVEAYSNRVANFFLAQG-LKKGDS-VALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLH 111 (548)
Q Consensus 36 ~~al~~~--~~~~Ty~el~~~v~~la~~L~~~g-v~~g~~-V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 111 (548)
++.+..+ +.+-||++-. +..+...+.+.| +++|+. .++....+-....+.++|.+.|..++.+-|...+..-..
T Consensus 25 ~v~~K~E~~~ptGSfK~R~--a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~ 102 (304)
T 1ve1_A 25 EVWVKLEGLNPGGSIKDRP--AWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKR 102 (304)
T ss_dssp EEEEEEGGGSTTSBTTHHH--HHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHH
T ss_pred EEEEEecccCCCCcHHHHH--HHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH
Confidence 4445444 3334555422 222233334445 456651 333456666777788888899998887766555566677
Q ss_pred HHHHhCeeEEEeCcc
Q psy9226 112 CINIAGVSAFIYGAE 126 (548)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (548)
.++..++++++++.+
T Consensus 103 ~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 103 VLKAFGAELVLTDPE 117 (304)
T ss_dssp HHHHTTCEEEEECTT
T ss_pred HHHHcCCEEEEECCC
Confidence 889999999999865
No 97
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=25.46 E-value=1.7e+02 Score=27.65 Aligned_cols=74 Identities=12% Similarity=-0.047 Sum_probs=45.3
Q ss_pred eeeHHHHHHHHHHH---HHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEE
Q psy9226 45 EWTAQQVEAYSNRV---ANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAF 121 (548)
Q Consensus 45 ~~Ty~el~~~v~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 121 (548)
.+++.+........ -..|.+.++++|++|+|... +.--.++...+...|+.++.+..+. +. ..++++.+++.+
T Consensus 149 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~--~~-~~~~~~lGa~~v 224 (348)
T 3two_A 149 NAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNE--HK-KQDALSMGVKHF 224 (348)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSS--TT-HHHHHHTTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH--HH-HHHHHhcCCCee
Confidence 46777664322211 13455668999999999987 5444444444456798877666432 23 335567888877
Q ss_pred E
Q psy9226 122 I 122 (548)
Q Consensus 122 i 122 (548)
+
T Consensus 225 ~ 225 (348)
T 3two_A 225 Y 225 (348)
T ss_dssp E
T ss_pred c
Confidence 7
No 98
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=25.01 E-value=4e+02 Score=24.95 Aligned_cols=78 Identities=8% Similarity=0.046 Sum_probs=49.8
Q ss_pred eeeHHHHHHHHHHHHHH---H-HHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeE
Q psy9226 45 EWTAQQVEAYSNRVANF---F-LAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSA 120 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~~---L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 120 (548)
.+++.+.......++.. | ...++++|++|+|....+.--.++...+...|+.++.+..+ .+.+ ..+++.+++.
T Consensus 131 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~--~~~~-~~~~~~ga~~ 207 (342)
T 4eye_A 131 QLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR--TAAT-EFVKSVGADI 207 (342)
T ss_dssp TSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS--GGGH-HHHHHHTCSE
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC--HHHH-HHHHhcCCcE
Confidence 46787775444333332 2 23488999999999986665555555556789987766653 3333 4566678887
Q ss_pred EEeCc
Q psy9226 121 FIYGA 125 (548)
Q Consensus 121 ii~~~ 125 (548)
++...
T Consensus 208 v~~~~ 212 (342)
T 4eye_A 208 VLPLE 212 (342)
T ss_dssp EEESS
T ss_pred EecCc
Confidence 76544
No 99
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=24.90 E-value=2.2e+02 Score=27.34 Aligned_cols=58 Identities=16% Similarity=0.052 Sum_probs=39.1
Q ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc-EEEecCCCCChhHHHHHHHHhCeeEEEe
Q psy9226 62 FLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGV-ITALINHNLRQNSLLHCINIAGVSAFIY 123 (548)
Q Consensus 62 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 123 (548)
|...++++|++|+|... +.--.++...+...|+ .++.++.+ ++-..++++.+++.++-
T Consensus 175 l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQ---ATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC---HHHHHHHHHHTCSEEEC
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHcCCCEEEC
Confidence 45568999999999987 5544555555556888 66666542 33345677788877664
No 100
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=24.83 E-value=1.9e+02 Score=27.14 Aligned_cols=57 Identities=9% Similarity=0.081 Sum_probs=42.6
Q ss_pred EEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchH
Q psy9226 73 VALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTD 129 (548)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 129 (548)
.++....+-....+.++|.+.|..++.+-|...+......++..++++++++....+
T Consensus 56 ~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~ 112 (318)
T 2rkb_A 56 HLVCSSGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDE 112 (318)
T ss_dssp EEEECCCSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSSHHH
T ss_pred EEEEECCchHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEEEECCCHHH
Confidence 344445577777788888899998887766555666777889999999998875433
No 101
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=24.54 E-value=3.4e+02 Score=25.72 Aligned_cols=76 Identities=13% Similarity=-0.011 Sum_probs=48.3
Q ss_pred eeeeHHHHHHHHHHH--H-HHH-HHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCee
Q psy9226 44 TEWTAQQVEAYSNRV--A-NFF-LAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVS 119 (548)
Q Consensus 44 ~~~Ty~el~~~v~~l--a-~~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 119 (548)
..+++.+........ | ..| ...++++|++|+|.. .+.--.++...+...|+.++.+..+ ++ -..++++.+++
T Consensus 160 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~--~~-~~~~~~~lGa~ 235 (363)
T 3uog_A 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSS--RE-KLDRAFALGAD 235 (363)
T ss_dssp TTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESC--HH-HHHHHHHHTCS
T ss_pred CCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecC--ch-hHHHHHHcCCC
Confidence 356787765432222 2 223 245899999999998 5555555555555789987766542 33 34457788888
Q ss_pred EEEe
Q psy9226 120 AFIY 123 (548)
Q Consensus 120 ~ii~ 123 (548)
.++-
T Consensus 236 ~vi~ 239 (363)
T 3uog_A 236 HGIN 239 (363)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8876
No 102
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=23.93 E-value=1.7e+02 Score=20.86 Aligned_cols=46 Identities=15% Similarity=0.039 Sum_probs=31.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q psy9226 44 TEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVI 96 (548)
Q Consensus 44 ~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (548)
..+.+.++.+ .+.+.+..+++.|.+++........+...+...|..
T Consensus 22 ~~ip~~~l~~-------~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKE-------RIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHH-------HHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHH-------HHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 3455666543 344456678889999998887777777777777753
No 103
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=23.86 E-value=2.1e+02 Score=27.10 Aligned_cols=15 Identities=33% Similarity=0.685 Sum_probs=13.1
Q ss_pred CCCCCCEEEEEcCCC
Q psy9226 66 GLKKGDSVALMLENR 80 (548)
Q Consensus 66 gv~~g~~V~i~~~n~ 80 (548)
-+++||+|+|++|.+
T Consensus 8 ~L~~GD~I~ivaPSs 22 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSR 22 (327)
T ss_dssp CCCTTCEEEEECSSS
T ss_pred CCCCCCEEEEEeCCC
Confidence 478999999999975
No 104
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=22.86 E-value=2.5e+02 Score=26.92 Aligned_cols=89 Identities=13% Similarity=0.072 Sum_probs=54.9
Q ss_pred CceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCC-ChhHHHH
Q psy9226 35 NKVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNL-RQNSLLH 111 (548)
Q Consensus 35 ~~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~ 111 (548)
.++.+..+ +.+-||++-... ..+.. +.+.| ...++....+-....+.++|.+.|..++.+-|.. .+..-..
T Consensus 53 ~~i~~K~E~~~ptgSfKdR~a~-~~l~~-a~~~g----~~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~ 126 (360)
T 2d1f_A 53 CTIHLKVEGLNPTGSFKDRGMT-MAVTD-ALAHG----QRAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLA 126 (360)
T ss_dssp SEEEEEEGGGSTTSBTTHHHHH-HHHHH-HHHTT----CSEEEECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHH
T ss_pred CeEEEEECCCCCCcCHHHHHHH-HHHHH-HHHCC----CCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHH
Confidence 34555554 444556553221 12222 22333 3344455566667777788899999988776654 5556667
Q ss_pred HHHHhCeeEEEeCccchH
Q psy9226 112 CINIAGVSAFIYGAELTD 129 (548)
Q Consensus 112 ~l~~~~~~~ii~~~~~~~ 129 (548)
.++..++++++++.+..+
T Consensus 127 ~~~~~GA~v~~v~~~~~~ 144 (360)
T 2d1f_A 127 QAVMHGAKIIQIDGNFDD 144 (360)
T ss_dssp HHHHTTCEEEEBSSCHHH
T ss_pred HHHHcCCEEEEECCCHHH
Confidence 889999999999875433
No 105
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=22.68 E-value=2e+02 Score=27.41 Aligned_cols=58 Identities=5% Similarity=-0.039 Sum_probs=42.2
Q ss_pred EEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCC-ChhHHHHHHHHhCeeEEEeCccchH
Q psy9226 72 SVALMLENRPEFVCLWLGLSKLGVITALINHNL-RQNSLLHCINIAGVSAFIYGAELTD 129 (548)
Q Consensus 72 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~l~~~~~~~ii~~~~~~~ 129 (548)
..++....+-....+.++|...|..++.+-|.. .+..-...++..++++++++.+..+
T Consensus 78 ~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~~~~ 136 (351)
T 3aey_A 78 QAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDD 136 (351)
T ss_dssp SEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 344555666677777788899999988766554 4556667889999999999875433
No 106
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=22.50 E-value=2.2e+02 Score=27.15 Aligned_cols=87 Identities=9% Similarity=0.033 Sum_probs=54.0
Q ss_pred eEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCC-ChhHHHHHH
Q psy9226 37 VIFMFE--NTEWTAQQVEAYSNRVANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNL-RQNSLLHCI 113 (548)
Q Consensus 37 ~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~l 113 (548)
+.+..+ +.+-||++-... ..+. .+.+.| ...++....+-....+.++|.+.|..++.+-|.. .+..-...+
T Consensus 49 i~~K~E~~~ptGS~KdR~a~-~~l~-~a~~~g----~~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~ 122 (352)
T 2zsj_A 49 IYLKYEGLNPTGSFKDRGMT-LAIS-KAVEAG----KRAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQA 122 (352)
T ss_dssp EEEEEGGGSTTSBTTHHHHH-HHHH-HHHHTT----CCEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH
T ss_pred EEEEECCCCCCccHHHHHHH-HHHH-HHHhcC----CCEEEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHH
Confidence 666555 334455542221 1222 223333 3344555666677777788899999988776654 455566788
Q ss_pred HHhCeeEEEeCccchH
Q psy9226 114 NIAGVSAFIYGAELTD 129 (548)
Q Consensus 114 ~~~~~~~ii~~~~~~~ 129 (548)
+..++++++++.+..+
T Consensus 123 ~~~GA~v~~v~~~~~~ 138 (352)
T 2zsj_A 123 MIYGAKVLAIQGTFDD 138 (352)
T ss_dssp HHTTCEEEEESSCHHH
T ss_pred HHcCCEEEEECCCHHH
Confidence 9999999999875433
No 107
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=22.22 E-value=2.6e+02 Score=26.54 Aligned_cols=62 Identities=11% Similarity=0.023 Sum_probs=40.6
Q ss_pred HHHH--cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCc
Q psy9226 61 FFLA--QGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGA 125 (548)
Q Consensus 61 ~L~~--~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~ 125 (548)
.|.+ .++++|++|+|...-..-.+++.+|-...|+.++.+..+ + +-..++++.+++.++-..
T Consensus 176 al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~--~-~~~~~~~~lGa~~vi~~~ 239 (359)
T 1h2b_A 176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVK--E-EKLKLAERLGADHVVDAR 239 (359)
T ss_dssp HHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESS--H-HHHHHHHHTTCSEEEETT
T ss_pred HHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC--H-HHHHHHHHhCCCEEEecc
Confidence 3455 689999999999985445555555544338876666542 3 334456788888877543
No 108
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=22.12 E-value=2.1e+02 Score=27.26 Aligned_cols=80 Identities=13% Similarity=-0.044 Sum_probs=47.2
Q ss_pred eeeHHHHHHHH--HHHH-HHHHHc-CCCCC-CEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCh-hHHHHHHHHhCe
Q psy9226 45 EWTAQQVEAYS--NRVA-NFFLAQ-GLKKG-DSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQ-NSLLHCINIAGV 118 (548)
Q Consensus 45 ~~Ty~el~~~v--~~la-~~L~~~-gv~~g-~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~-~~~~~~l~~~~~ 118 (548)
.+++.+..... -..| ..|.+. ++++| ++|+|....+.--.++...+...|+..+.+..+... .+....+++.++
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA 217 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC
Confidence 47777654332 1222 234443 89999 999999885555444444445678876655432222 334455678888
Q ss_pred eEEEeC
Q psy9226 119 SAFIYG 124 (548)
Q Consensus 119 ~~ii~~ 124 (548)
+.++-.
T Consensus 218 ~~vi~~ 223 (364)
T 1gu7_A 218 TQVITE 223 (364)
T ss_dssp SEEEEH
T ss_pred eEEEec
Confidence 887743
No 109
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=22.03 E-value=5.4e+02 Score=24.83 Aligned_cols=59 Identities=10% Similarity=0.021 Sum_probs=45.5
Q ss_pred EEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHH
Q psy9226 73 VALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAV 131 (548)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 131 (548)
.++....+-....+.++|...|..++.+-|...+..-...++..++++++++....+..
T Consensus 114 ~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~a~ 172 (398)
T 4d9i_A 114 TFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTV 172 (398)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 34446667788888888999999988776766677777888999999999987644433
No 110
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=21.79 E-value=2.2e+02 Score=27.46 Aligned_cols=58 Identities=10% Similarity=0.095 Sum_probs=43.2
Q ss_pred EEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchH
Q psy9226 72 SVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTD 129 (548)
Q Consensus 72 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 129 (548)
..++....+-....+.++|.+.|..++.+-|...+..-...++..++++++++....+
T Consensus 94 ~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 151 (372)
T 1p5j_A 94 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDE 151 (372)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSCHHH
T ss_pred CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCCHHH
Confidence 3444445577777788888999998887766556667778889999999999875433
No 111
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=21.71 E-value=2.5e+02 Score=26.41 Aligned_cols=77 Identities=9% Similarity=0.023 Sum_probs=47.7
Q ss_pred eeeHHHHHHHHHHH---HHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeEE
Q psy9226 45 EWTAQQVEAYSNRV---ANFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSAF 121 (548)
Q Consensus 45 ~~Ty~el~~~v~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 121 (548)
.+++.+........ -..|...++++|++|+|......-.+++.+|- ..|+.++.++.+ + +-..++++.+++.+
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~--~-~~~~~~~~lGa~~~ 214 (340)
T 3s2e_A 139 KVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDID--D-AKLNLARRLGAEVA 214 (340)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEESC--H-HHHHHHHHTTCSEE
T ss_pred CCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeCC--H-HHHHHHHHcCCCEE
Confidence 46777654322221 12344558999999999887555555555554 579877766542 3 33446778888887
Q ss_pred EeCc
Q psy9226 122 IYGA 125 (548)
Q Consensus 122 i~~~ 125 (548)
+-..
T Consensus 215 i~~~ 218 (340)
T 3s2e_A 215 VNAR 218 (340)
T ss_dssp EETT
T ss_pred EeCC
Confidence 7543
No 112
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=21.66 E-value=2.8e+02 Score=27.54 Aligned_cols=98 Identities=11% Similarity=0.003 Sum_probs=64.1
Q ss_pred CceEEEEC--Ce-eeeHHHHH--HHHHHHHHH-HHHcCC-CCCC----------------EEEEEcCCCHHHHHHHHHHH
Q psy9226 35 NKVIFMFE--NT-EWTAQQVE--AYSNRVANF-FLAQGL-KKGD----------------SVALMLENRPEFVCLWLGLS 91 (548)
Q Consensus 35 ~~~al~~~--~~-~~Ty~el~--~~v~~la~~-L~~~gv-~~g~----------------~V~i~~~n~~~~~~~~lA~~ 91 (548)
.++.+..+ +. +=||++-- ..+.+++.. -++.|+ .+|+ +.++....+-....+.++|.
T Consensus 101 ~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aSsGNhg~avA~~aa 180 (442)
T 3ss7_X 101 GQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA 180 (442)
T ss_dssp SEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEECSSHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEECCCHHHHHHHHHHH
Confidence 45666555 23 45665542 333344333 244554 4555 35566666778888888899
Q ss_pred HcCcEEEecCCCCChhHHHHHHHHhCeeEEEeCccchHHHH
Q psy9226 92 KLGVITALINHNLRQNSLLHCINIAGVSAFIYGAELTDAVQ 132 (548)
Q Consensus 92 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 132 (548)
+.|..++.+-|...+..-...++..++++++++....+...
T Consensus 181 ~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~~~a~~ 221 (442)
T 3ss7_X 181 RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVE 221 (442)
T ss_dssp HHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCHHHHHH
T ss_pred HhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHH
Confidence 99998887766556666777889999999999986544443
No 113
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=21.33 E-value=4.8e+02 Score=23.98 Aligned_cols=87 Identities=14% Similarity=0.047 Sum_probs=56.2
Q ss_pred ceEEEEC--CeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHH
Q psy9226 36 KVIFMFE--NTEWTAQQVEAYSNRVANFFLAQGL-KKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHC 112 (548)
Q Consensus 36 ~~al~~~--~~~~Ty~el~~~v~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 112 (548)
++.+..+ +.+-||++-.. ..+...+.+.|. ++|+.|+... .+-....+.++|.+.|..++.+-|...+..-...
T Consensus 26 ~v~~K~E~~~ptGSfK~R~a--~~~i~~a~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~ 102 (303)
T 2v03_A 26 EVWLKLEGNNPAGSVKDRAA--LSMIVEAEKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA 102 (303)
T ss_dssp EEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred EEEEEeccCCCCCCcHHHHH--HHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 4444444 33445555322 222233344453 6676665554 5667777788888999998887666566666778
Q ss_pred HHHhCeeEEEeCc
Q psy9226 113 INIAGVSAFIYGA 125 (548)
Q Consensus 113 l~~~~~~~ii~~~ 125 (548)
++..++++++++.
T Consensus 103 ~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 103 MRAYGAELILVTK 115 (303)
T ss_dssp HHHTTCEEEEECT
T ss_pred HHHcCCEEEEECC
Confidence 8999999999986
No 114
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=21.16 E-value=1.7e+02 Score=28.82 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEEcCCC-HHHH-HHHHHHHHcCcEEEecC
Q psy9226 51 VEAYSNRVANFFLAQ--GLKKGDSVALMLENR-PEFV-CLWLGLSKLGVITALIN 101 (548)
Q Consensus 51 l~~~v~~la~~L~~~--gv~~g~~V~i~~~n~-~~~~-~~~lA~~~~G~~~v~l~ 101 (548)
+..+.+++|..+.+. ++++|+.|.|..+.. .+++ .+.-++.++|+.++.+.
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 58 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 58 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 356778889888886 779999999999864 3333 55567788899887654
No 115
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=21.05 E-value=3.1e+02 Score=25.98 Aligned_cols=77 Identities=13% Similarity=0.026 Sum_probs=48.9
Q ss_pred eeeHHHHHHHHHHHHHH---H-HHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCeeE
Q psy9226 45 EWTAQQVEAYSNRVANF---F-LAQGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGVSA 120 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~~---L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 120 (548)
.+++.+.......++.. | ...++++|++|+|....+.--.++...+...|+.++.+..+ ++. ...+++.+++.
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~--~~~-~~~~~~lGa~~ 215 (353)
T 4dup_A 139 GYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS--TGK-CEACERLGAKR 215 (353)
T ss_dssp TCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS--HHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC--HHH-HHHHHhcCCCE
Confidence 46777775444433333 2 23489999999999666665555555666789987766542 333 34556678877
Q ss_pred EEeC
Q psy9226 121 FIYG 124 (548)
Q Consensus 121 ii~~ 124 (548)
++..
T Consensus 216 ~~~~ 219 (353)
T 4dup_A 216 GINY 219 (353)
T ss_dssp EEET
T ss_pred EEeC
Confidence 7643
No 116
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=20.95 E-value=2.9e+02 Score=26.21 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=13.9
Q ss_pred CCCCCCEEEEEcCCCH
Q psy9226 66 GLKKGDSVALMLENRP 81 (548)
Q Consensus 66 gv~~g~~V~i~~~n~~ 81 (548)
-+++||+|+|++|.+.
T Consensus 9 ~L~~GD~I~ivaPSs~ 24 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSP 24 (336)
T ss_dssp CCCTTCEEEEECSSSC
T ss_pred CCCCCCEEEEEeCCCC
Confidence 5789999999999873
No 117
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=20.73 E-value=3.2e+02 Score=26.89 Aligned_cols=58 Identities=14% Similarity=0.086 Sum_probs=27.2
Q ss_pred EEEcCCCHHHHH-HHHHHHHcCcEEEecCCCCChh--HHHHHHHHhCeeEEEeCccchHHH
Q psy9226 74 ALMLENRPEFVC-LWLGLSKLGVITALINHNLRQN--SLLHCINIAGVSAFIYGAELTDAV 131 (548)
Q Consensus 74 ~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~~--~~~~~l~~~~~~~ii~~~~~~~~~ 131 (548)
+++..+..+.+. ++.++...|-.++..++.+... .+...+...+.++++++.+..+.+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l 160 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAV 160 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHH
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 344445554443 3334445555555444444221 112255666677766665433333
No 118
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=20.51 E-value=2.1e+02 Score=27.12 Aligned_cols=76 Identities=14% Similarity=0.065 Sum_probs=46.4
Q ss_pred eeeHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc-EEEecCCCCChhHHHHHHHHhCeeE
Q psy9226 45 EWTAQQVEAYSNR--VA-NFFLAQGLKKGDSVALMLENRPEFVCLWLGLSKLGV-ITALINHNLRQNSLLHCINIAGVSA 120 (548)
Q Consensus 45 ~~Ty~el~~~v~~--la-~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~ 120 (548)
.+++.+....... .| ..+...++++|++|+|+.. +.--.++...+...|+ .++.++. .++-..++++.+++.
T Consensus 139 ~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~ 214 (352)
T 3fpc_A 139 EIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGS---RKHCCDIALEYGATD 214 (352)
T ss_dssp TSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECC---CHHHHHHHHHHTCCE
T ss_pred CCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECC---CHHHHHHHHHhCCce
Confidence 4566665432111 11 2345568999999999986 5444444444556787 5665654 234456778888887
Q ss_pred EEeC
Q psy9226 121 FIYG 124 (548)
Q Consensus 121 ii~~ 124 (548)
++-.
T Consensus 215 vi~~ 218 (352)
T 3fpc_A 215 IINY 218 (352)
T ss_dssp EECG
T ss_pred EEcC
Confidence 7743
No 119
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=20.36 E-value=2.5e+02 Score=27.83 Aligned_cols=76 Identities=13% Similarity=0.014 Sum_probs=47.3
Q ss_pred eeeHHHHHHHHHHHHH---HHHH---cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCChhHHHHHHHHhCe
Q psy9226 45 EWTAQQVEAYSNRVAN---FFLA---QGLKKGDSVALMLENRPEFVCLWLGLSKLGVITALINHNLRQNSLLHCINIAGV 118 (548)
Q Consensus 45 ~~Ty~el~~~v~~la~---~L~~---~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~ 118 (548)
.+++.+.......... .|.+ .++++|++|+|....+.--.++...+...|+..+.+.. +++. ..++++.++
T Consensus 198 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~--~~~~-~~~~~~lGa 274 (456)
T 3krt_A 198 HLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS--SPQK-AEICRAMGA 274 (456)
T ss_dssp TSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHH-HHHHHHHTC
T ss_pred CCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC--CHHH-HHHHHhhCC
Confidence 4677776532222222 2222 47899999999988666556555666678988776653 3433 445577777
Q ss_pred eEEEe
Q psy9226 119 SAFIY 123 (548)
Q Consensus 119 ~~ii~ 123 (548)
+.++-
T Consensus 275 ~~vi~ 279 (456)
T 3krt_A 275 EAIID 279 (456)
T ss_dssp CEEEE
T ss_pred cEEEe
Confidence 77664
Done!