Query psy9227
Match_columns 156
No_of_seqs 102 out of 1563
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 22:08:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 7.8E-28 2.7E-32 185.7 7.5 85 61-145 402-490 (510)
2 3vw7_A Proteinase-activated re 99.9 2.3E-25 8E-30 169.9 10.1 92 60-151 382-474 (484)
3 4amj_A Beta-1 adrenergic recep 99.9 1.2E-24 4.2E-29 157.2 11.8 141 8-153 172-312 (315)
4 2rh1_A Beta-2-adrenergic recep 99.9 8.7E-24 3E-28 162.6 16.3 80 62-146 402-481 (500)
5 2ks9_A Substance-P receptor; w 99.9 1.3E-23 4.4E-28 155.1 14.6 134 9-145 192-325 (364)
6 3odu_A C-X-C chemokine recepto 99.9 1.1E-24 3.6E-29 166.9 7.9 87 61-147 406-498 (502)
7 3eml_A Human adenosine A2A rec 99.9 2.3E-24 7.8E-29 164.3 9.2 87 60-148 387-473 (488)
8 4eiy_A Adenosine receptor A2A/ 99.9 1.4E-24 4.7E-29 164.0 5.6 88 59-148 345-432 (447)
9 4dkl_A MU-type opioid receptor 99.9 9E-23 3.1E-27 154.6 15.3 84 61-145 376-459 (464)
10 3uon_A Human M2 muscarinic ace 99.9 1.1E-23 3.6E-28 159.9 8.6 83 62-148 382-464 (467)
11 3rze_A Histamine H1 receptor, 99.9 1.1E-22 3.8E-27 153.8 13.8 82 62-147 367-448 (452)
12 1u19_A Rhodopsin; G protein-co 99.9 9E-23 3.1E-27 149.5 12.6 130 9-147 200-329 (349)
13 3pbl_A D(3) dopamine receptor, 99.9 2.6E-23 8.8E-28 158.5 9.5 83 62-147 395-477 (481)
14 3sn6_R Lysozyme, beta-2 adrene 99.9 1.1E-22 3.9E-27 156.8 11.7 135 9-148 344-497 (514)
15 2lnl_A C-X-C chemokine recepto 99.9 1.2E-22 4.1E-27 146.4 10.3 123 7-144 168-296 (296)
16 4ea3_A Fusion protein of nocic 99.9 7.8E-22 2.7E-26 149.2 14.9 131 9-147 285-415 (434)
17 3v2y_A Sphingosine 1-phosphate 99.9 1.1E-21 3.8E-26 151.7 13.3 85 62-148 415-499 (520)
18 2z73_A Rhodopsin; visual pigme 99.9 2.8E-21 9.6E-26 146.5 15.0 131 8-141 195-331 (448)
19 2koe_A Human cannabinoid recep 99.1 1.1E-11 3.9E-16 62.9 0.9 37 107-143 3-39 (40)
20 2ki9_A Cannabinoid receptor 2; 98.6 1.7E-09 5.7E-14 52.3 -1.7 29 63-91 1-29 (33)
21 2z73_A Rhodopsin; visual pigme 80.7 13 0.00045 27.4 8.8 33 113-145 307-339 (448)
22 3eml_A Human adenosine A2A rec 75.5 20 0.00068 26.5 8.5 94 58-152 388-481 (488)
23 4eiy_A Adenosine receptor A2A/ 72.0 26 0.00089 25.5 8.7 94 57-151 346-439 (447)
24 2rdd_B UPF0092 membrane protei 65.3 6 0.0002 18.7 2.4 21 23-43 6-27 (37)
25 3arc_M Photosystem II reaction 63.1 11 0.00037 17.8 3.8 22 15-36 8-29 (36)
26 2ket_A Cathelicidin-6; antimic 55.6 6.4 0.00022 16.5 1.3 13 130-142 4-16 (27)
27 4amj_A Beta-1 adrenergic recep 49.4 39 0.0013 23.0 5.5 6 131-136 294-299 (315)
28 4ea3_A Fusion protein of nocic 48.0 78 0.0027 23.1 9.1 129 12-148 284-412 (434)
29 2jx4_A Vasopressin V2 receptor 37.4 8 0.00027 19.8 0.2 11 61-71 41-51 (52)
30 3sn6_R Lysozyme, beta-2 adrene 37.4 1.3E+02 0.0044 22.5 8.7 31 12-42 351-381 (514)
31 1v54_L VIIIA, cytochrome C oxi 34.8 46 0.0016 16.6 3.8 19 10-28 21-39 (47)
32 2knc_A Integrin alpha-IIB; tra 32.5 55 0.0019 16.9 4.7 33 10-42 10-42 (54)
33 2y69_L Cytochrome C oxidase su 31.4 63 0.0022 17.2 3.8 19 10-28 37-55 (63)
34 2ks9_A Substance-P receptor; w 23.6 1.9E+02 0.0065 20.1 9.2 23 116-138 300-322 (364)
35 3eyi_A Z-DNA-binding protein 1 21.6 69 0.0024 17.5 2.2 25 106-130 27-52 (72)
36 2l8s_A Integrin alpha-1; trans 20.6 1E+02 0.0035 15.9 3.7 29 11-39 8-36 (54)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.94 E-value=7.8e-28 Score=185.75 Aligned_cols=85 Identities=26% Similarity=0.470 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccch----hHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHH
Q psy9227 61 ERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAG----WFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEF 136 (156)
Q Consensus 61 ~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~----~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~ 136 (156)
++|+|+++|+++++++|++||+||++..++..+.++... ......+..++.+|+++||++||+||+++|++||++|
T Consensus 402 ~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aF 481 (510)
T 4grv_A 402 QALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVF 481 (510)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 357899999999999999999999999999887665422 2334567788999999999999999999999999999
Q ss_pred Hhhcccccc
Q psy9227 137 KQVLPFFSS 145 (156)
Q Consensus 137 ~~~~~~~~~ 145 (156)
+++++|+++
T Consensus 482 k~iL~C~C~ 490 (510)
T 4grv_A 482 LSTLACLCP 490 (510)
T ss_dssp ---------
T ss_pred HHHHhhcCC
Confidence 999976543
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=169.86 Aligned_cols=92 Identities=18% Similarity=0.326 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHh
Q psy9227 60 RERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHE-DVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQ 138 (156)
Q Consensus 60 ~~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~ 138 (156)
.++++|+++++++++++|++||+||+++.++..+.. ..........+..++.+++++||++||+||++++++||+++++
T Consensus 382 ~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ 461 (484)
T 3vw7_A 382 RSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYS 461 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC------
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHH
Confidence 356789999999999999999999999999876543 2333344556788999999999999999999999999999999
Q ss_pred hcccccccCCCCC
Q psy9227 139 VLPFFSSAGGASS 151 (156)
Q Consensus 139 ~~~~~~~~~~~~~ 151 (156)
+++|++....+..
T Consensus 462 ll~~~~~~~~~~~ 474 (484)
T 3vw7_A 462 ILCCKESSDPSCY 474 (484)
T ss_dssp -------------
T ss_pred HHhhccCCCcccc
Confidence 9988776554433
No 3
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.92 E-value=1.2e-24 Score=157.18 Aligned_cols=141 Identities=21% Similarity=0.395 Sum_probs=101.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy9227 8 LGLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKNLRREEWDRERKKRTNRMLIAMVFIFGFCWSPINVI 87 (156)
Q Consensus 8 ~~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~ 87 (156)
.....|.....++.+++|+++++++|.+|++.++++.++.++.++...+++..++++|+++++.+++++|++||+|+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~ 251 (315)
T 4amj_A 172 VTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLV 251 (315)
T ss_dssp CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888888888999999999999999999999877766555544445556678899999999999999999999999
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccccccCCCCCCc
Q psy9227 88 NLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSSAGGASSRS 153 (156)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~~~~~~~~~ 153 (156)
.++..+..+... ..+..+..+++++||++||++|+ ++++||++++++++|.+....+.+.+
T Consensus 252 ~~~~~~~~~~~~----~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~~~~~~~~~~ 312 (315)
T 4amj_A 252 NIVNVFNRDLVP----DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPRKADRRLHHH 312 (315)
T ss_dssp HHHHHHCTTSSC----HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC------------
T ss_pred HHHHHhcCccch----HHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCCcchhhhhcc
Confidence 998877655432 12456777899999999999999 99999999999998877665544443
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.92 E-value=8.7e-24 Score=162.64 Aligned_cols=80 Identities=21% Similarity=0.533 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcc
Q psy9227 62 RKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLP 141 (156)
Q Consensus 62 ~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~ 141 (156)
+|+|+++++++++++|++||+||++..++..+.+.... ..+..+..+|+++||++||+||++ +++||++++++++
T Consensus 402 ~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~----~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~ 476 (500)
T 2rh1_A 402 KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR----KEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLC 476 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC----HHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc----HHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHh
Confidence 67899999999999999999999999999888644322 236678899999999999999996 9999999999997
Q ss_pred ccccc
Q psy9227 142 FFSSA 146 (156)
Q Consensus 142 ~~~~~ 146 (156)
|+++.
T Consensus 477 ~~~~~ 481 (500)
T 2rh1_A 477 LRRSS 481 (500)
T ss_dssp C----
T ss_pred hhccC
Confidence 76654
No 5
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.91 E-value=1.3e-23 Score=155.14 Aligned_cols=134 Identities=25% Similarity=0.454 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy9227 9 GLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKNLRREEWDRERKKRTNRMLIAMVFIFGFCWSPINVIN 88 (156)
Q Consensus 9 ~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~ 88 (156)
....|.+...++.+++|+++++++|..|.+.++++..+....... +++.++++|+++++++++++|++||+|+.+..
T Consensus 192 ~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~---~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~ 268 (364)
T 2ks9_A 192 YEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRY---HEQVSAKRKVVKMMIVVVCTFAICWLPFHIFF 268 (364)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh---hhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788888899999999999999999999998755443322221 22456778999999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccccc
Q psy9227 89 LVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSS 145 (156)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~ 145 (156)
++..+.++.........+..+..+++++|+++||++|++++++||++++++++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 325 (364)
T 2ks9_A 269 LLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325 (364)
T ss_dssp HHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCC
T ss_pred HHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCC
Confidence 987776543222222335667888999999999999999999999999999977654
No 6
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.91 E-value=1.1e-24 Score=166.90 Aligned_cols=87 Identities=20% Similarity=0.317 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhh------ccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHH
Q psy9227 61 ERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHE------DVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRK 134 (156)
Q Consensus 61 ~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~------~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~ 134 (156)
++++|+++++++++++|++||+|+.+..++..+.. .+........+..++.+++++|+++||+||++++++||+
T Consensus 406 ~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~ 485 (502)
T 3odu_A 406 HQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKT 485 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCC
T ss_pred HhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHH
Confidence 45789999999999999999999999999877652 222234455677889999999999999999999999999
Q ss_pred HHHhhcccccccC
Q psy9227 135 EFKQVLPFFSSAG 147 (156)
Q Consensus 135 ~~~~~~~~~~~~~ 147 (156)
+++++++|+++.+
T Consensus 486 ~~~~ll~~~~~~~ 498 (502)
T 3odu_A 486 SAQHALTSGRPLE 498 (502)
T ss_dssp CHHHHHSSCSSCG
T ss_pred HHHHHhccCCchh
Confidence 9999998877654
No 7
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.91 E-value=2.3e-24 Score=164.29 Aligned_cols=87 Identities=20% Similarity=0.465 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhh
Q psy9227 60 RERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQV 139 (156)
Q Consensus 60 ~~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~ 139 (156)
.++++|+++++++++++|++||+|++++.++..+..+.... ...+..++.+++++|+++||+||++++++||++++++
T Consensus 387 ~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l 464 (488)
T 3eml_A 387 LQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHA--PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI 464 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccc--cHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHH
Confidence 46789999999999999999999999999998877654221 2235678889999999999999999999999999999
Q ss_pred cccccccCC
Q psy9227 140 LPFFSSAGG 148 (156)
Q Consensus 140 ~~~~~~~~~ 148 (156)
++|+.++..
T Consensus 465 ~~~~~~~~~ 473 (488)
T 3eml_A 465 IRSHVLRQQ 473 (488)
T ss_dssp HHHTTSCC-
T ss_pred HhhcccccC
Confidence 977655443
No 8
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.90 E-value=1.4e-24 Score=164.03 Aligned_cols=88 Identities=19% Similarity=0.460 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHh
Q psy9227 59 DRERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQ 138 (156)
Q Consensus 59 ~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~ 138 (156)
..++++|+++++++++++|++||+|+.+..++..+.++.... ...+..++.+++++|+++||+||++++++||+++++
T Consensus 345 ~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ 422 (447)
T 4eiy_A 345 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHA--PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRK 422 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCccccc--chHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHH
Confidence 346788999999999999999999999999988876543221 123667889999999999999999999999999999
Q ss_pred hcccccccCC
Q psy9227 139 VLPFFSSAGG 148 (156)
Q Consensus 139 ~~~~~~~~~~ 148 (156)
++++++++..
T Consensus 423 ~~~~~~~r~~ 432 (447)
T 4eiy_A 423 IIRSHVLRQQ 432 (447)
T ss_dssp HHHHTC----
T ss_pred HHHHHHhccC
Confidence 9977665443
No 9
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.90 E-value=9e-23 Score=154.61 Aligned_cols=84 Identities=27% Similarity=0.586 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhc
Q psy9227 61 ERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVL 140 (156)
Q Consensus 61 ~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~ 140 (156)
++|+|+++++++++++|++||+|+.+..++..+..... ......+..+..+++++|+++||+||++++++||+++++++
T Consensus 376 ~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~-~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 376 RNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPE-TTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCc-cccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 45689999999999999999999999999987754332 23445567788999999999999999999999999999986
Q ss_pred ccccc
Q psy9227 141 PFFSS 145 (156)
Q Consensus 141 ~~~~~ 145 (156)
+++..
T Consensus 455 ~~~~~ 459 (464)
T 4dkl_A 455 IPTSS 459 (464)
T ss_dssp C----
T ss_pred ccccc
Confidence 55433
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.89 E-value=1.1e-23 Score=159.95 Aligned_cols=83 Identities=29% Similarity=0.485 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcc
Q psy9227 62 RKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLP 141 (156)
Q Consensus 62 ~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~ 141 (156)
+|+|+++++++++++|++||+|+.+..++..+...... ..+..+..+++++|+++||+||++++++||++++++++
T Consensus 382 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~----~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 457 (467)
T 3uon_A 382 REKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIP----NTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM 457 (467)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSC----HHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHh
Confidence 46899999999999999999999999999887665332 23567888999999999999999999999999999998
Q ss_pred cccccCC
Q psy9227 142 FFSSAGG 148 (156)
Q Consensus 142 ~~~~~~~ 148 (156)
|+++..+
T Consensus 458 c~~~~~~ 464 (467)
T 3uon_A 458 CHYKNIG 464 (467)
T ss_dssp -------
T ss_pred hhccCCC
Confidence 7766543
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.89 E-value=1.1e-22 Score=153.78 Aligned_cols=82 Identities=23% Similarity=0.467 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcc
Q psy9227 62 RKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLP 141 (156)
Q Consensus 62 ~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~ 141 (156)
+|+|+++++++++++|++||+|+.+..++..+.+..... .+..+..+++++|+++||+||++++++||++++++++
T Consensus 367 ~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~~----~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 442 (452)
T 3rze_A 367 RERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNE----HLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILH 442 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCT----TTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccccH----HHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHH
Confidence 688999999999999999999999999998876654332 2445888899999999999999999999999999998
Q ss_pred cccccC
Q psy9227 142 FFSSAG 147 (156)
Q Consensus 142 ~~~~~~ 147 (156)
|+++.+
T Consensus 443 ~~~~~~ 448 (452)
T 3rze_A 443 IRSGEN 448 (452)
T ss_dssp C-----
T ss_pred hccccc
Confidence 877654
No 12
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.89 E-value=9e-23 Score=149.51 Aligned_cols=130 Identities=25% Similarity=0.391 Sum_probs=104.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy9227 9 GLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKNLRREEWDRERKKRTNRMLIAMVFIFGFCWSPINVIN 88 (156)
Q Consensus 9 ~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~ 88 (156)
....|.....++.+++|+++++++|.+|++.++++.++.+.+ ++..++++|+++++++++++|++||+|+.+..
T Consensus 200 ~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~ 273 (349)
T 1u19_A 200 NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES------ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVA 273 (349)
T ss_dssp THHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCSS------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788888888899999999999999999998876543322 12345677999999999999999999999998
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccccccC
Q psy9227 89 LVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSSAG 147 (156)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~~~ 147 (156)
++.......... ..+..+..+++++|+++||++|++++++||++++++++|.+...
T Consensus 274 ~~~~~~~~~~~~---~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~~~~ 329 (349)
T 1u19_A 274 FYIFTHQGSDFG---PIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL 329 (349)
T ss_dssp HHHHHTTTSCCC---HHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSCCCT
T ss_pred HhheecCCcccc---hHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcccCCCC
Confidence 887665433221 23456788899999999999999999999999999997765543
No 13
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.89 E-value=2.6e-23 Score=158.47 Aligned_cols=83 Identities=22% Similarity=0.379 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcc
Q psy9227 62 RKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLP 141 (156)
Q Consensus 62 ~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~ 141 (156)
+++|+++++++++++|++||+|+.+..++..+.+..... ..+..+..+++++|+++||+||++++++||++++++++
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~---~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 471 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVS---PELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILS 471 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCc---HHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHh
Confidence 488999999999999999999999999998776543222 23567788999999999999999999999999999998
Q ss_pred cccccC
Q psy9227 142 FFSSAG 147 (156)
Q Consensus 142 ~~~~~~ 147 (156)
|++..+
T Consensus 472 c~~~~~ 477 (481)
T 3pbl_A 472 CGRPLE 477 (481)
T ss_dssp C-----
T ss_pred ccCcHH
Confidence 776544
No 14
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.89 E-value=1.1e-22 Score=156.85 Aligned_cols=135 Identities=21% Similarity=0.404 Sum_probs=99.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcc-------------------cchhHHHHHHHHHHHHH
Q psy9227 9 GLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKN-------------------LRREEWDRERKKRTNRM 69 (156)
Q Consensus 9 ~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~k~~~~ 69 (156)
....|.+..+++.+++|+++++++|.+|++.++++.++.+.... ..+..+..++++|++++
T Consensus 344 ~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 423 (514)
T 3sn6_R 344 TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKT 423 (514)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHH
Confidence 45678888999999999999999999999999887553211000 01112223467899999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccccccCC
Q psy9227 70 LIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSSAGG 148 (156)
Q Consensus 70 ~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~~~~ 148 (156)
+++++++|++||+|+.+..++..+...... ..+..+..+++++||++||+||+ ++++||++++++++|+++...
T Consensus 424 l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~----~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~~~ 497 (514)
T 3sn6_R 424 LGIIMGTFTLCWLPFFIVNIVHVIQDNLIR----KEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSSLK 497 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSSC----HHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccc----hHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCccccc
Confidence 999999999999999999998777544322 22556778899999999999999 899999999999987665443
No 15
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.88 E-value=1.2e-22 Score=146.40 Aligned_cols=123 Identities=26% Similarity=0.492 Sum_probs=100.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy9227 7 GLGLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKNLRREEWDRERKKRTNRMLIAMVFIFGFCWSPINV 86 (156)
Q Consensus 7 ~~~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i 86 (156)
......|.+....+.+++|+.++.++|..+.+.++++. .++++|+++++.+++++|++||+|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~---------------~~~~~k~~~~~~~v~~~f~icw~P~~i 232 (296)
T 2lnl_A 168 AKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH---------------MGQKHRAMRVIFAVVLIFLLCWLPYNL 232 (296)
T ss_dssp TTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCC---------------CHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------hhhhhhHHHHHHHhhhheeeeehHHHH
Confidence 34556788888899999999999999998887665431 134678999999999999999999999
Q ss_pred HHHHHHHhhcc------chhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhccccc
Q psy9227 87 INLVNDLHEDV------AGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFS 144 (156)
Q Consensus 87 ~~l~~~~~~~~------~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~ 144 (156)
..++..+.... ........+..++.+++++||++||++|++++++||++++++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~crG 296 (296)
T 2lnl_A 233 VLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG 296 (296)
T ss_dssp HHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHCC
T ss_pred HHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCC
Confidence 99998776533 11222345667889999999999999999999999999999998763
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.88 E-value=7.8e-22 Score=149.24 Aligned_cols=131 Identities=21% Similarity=0.437 Sum_probs=98.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy9227 9 GLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKNLRREEWDRERKKRTNRMLIAMVFIFGFCWSPINVIN 88 (156)
Q Consensus 9 ~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~ 88 (156)
....|.+...++.+++|+++++++|..|++.++++.++.. ..+..++++|+++++++++++|++||+|+.+..
T Consensus 285 ~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~ 357 (434)
T 4ea3_A 285 WGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSG-------SREKDRNLRRITRLVLVVVAVFVGCWTPVQVFV 357 (434)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466888888999999999999999999999987543321 122345678999999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccccccC
Q psy9227 89 LVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSSAG 147 (156)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~~~ 147 (156)
++..+...... .....+..+..+++++|+++||+||++++++||+++++++++++.+.
T Consensus 358 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~~ 415 (434)
T 4ea3_A 358 LAQGLGVQPSS-ETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASALGR 415 (434)
T ss_dssp HHHHTTCCCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----------
T ss_pred HHHHhccCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 98776544322 33345667788899999999999999999999999999987655443
No 17
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.87 E-value=1.1e-21 Score=151.69 Aligned_cols=85 Identities=15% Similarity=0.193 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcc
Q psy9227 62 RKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLP 141 (156)
Q Consensus 62 ~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~ 141 (156)
+++|+++++++++++|++||+||++..++..+....... ......++.+++++||++||+||++++++||++++++++
T Consensus 415 ~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~ 492 (520)
T 3v2y_A 415 ENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCD--ILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMG 492 (520)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCS--TTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 488999999999999999999999999998765532111 112344667799999999999999999999999999998
Q ss_pred cccccCC
Q psy9227 142 FFSSAGG 148 (156)
Q Consensus 142 ~~~~~~~ 148 (156)
++.....
T Consensus 493 ~~~~~~~ 499 (520)
T 3v2y_A 493 RPLEVLF 499 (520)
T ss_dssp SCC----
T ss_pred Hhccccc
Confidence 7765443
No 18
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.87 E-value=2.8e-21 Score=146.51 Aligned_cols=131 Identities=23% Similarity=0.337 Sum_probs=102.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC------CCcccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9227 8 LGLLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKP------GSKNLRREEWDRERKKRTNRMLIAMVFIFGFCW 81 (156)
Q Consensus 8 ~~~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~------~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~ 81 (156)
.....|.+..+++.+++|+++++++|..|.+.++++.++.. ...+..+..+..++++|+++++++++++|++||
T Consensus 195 ~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~ 274 (448)
T 2z73_A 195 STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSW 274 (448)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHh
Confidence 34566777788888999999999999999999988766432 111112222344568899999999999999999
Q ss_pred hHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcc
Q psy9227 82 SPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLP 141 (156)
Q Consensus 82 ~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~ 141 (156)
+|+.+..++..+....... ..+..+..+++.+|+++||+||++++++||++++++++
T Consensus 275 ~P~~i~~~~~~~~~~~~~~---~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 275 SPYAVVALLAQFGPLEWVT---PYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HHHHHHHHHHHHSCGGGCC---HHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHhCCcccCC---hHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 9999999987765432211 23456777899999999999999999999999999884
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=99.11 E-value=1.1e-11 Score=62.86 Aligned_cols=37 Identities=22% Similarity=0.531 Sum_probs=33.5
Q ss_pred HHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccc
Q psy9227 107 FFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFF 143 (156)
Q Consensus 107 ~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~ 143 (156)
..++.+++++||++||+||++.+++||++++++++|+
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~~ 39 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSA 39 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhhc
Confidence 4678889999999999999999999999999988664
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.60 E-value=1.7e-09 Score=52.29 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy9227 63 KKRTNRMLIAMVFIFGFCWSPINVINLVN 91 (156)
Q Consensus 63 ~~k~~~~~~~i~~~f~v~~~P~~i~~l~~ 91 (156)
|+|+++++.+++++|++||+||++..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 35788999999999999999999987653
No 21
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=80.67 E-value=13 Score=27.39 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=22.2
Q ss_pred HHHhhhhhhHHHHHhcCHHHHHHHHhhcccccc
Q psy9227 113 IAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSS 145 (156)
Q Consensus 113 l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~ 145 (156)
-..+|+.+--+.---..+++++.+++.++|++.
T Consensus 307 ns~~NPiIY~~~~~~fR~~~~~~~~~~~~~~~~ 339 (448)
T 2z73_A 307 SAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF 339 (448)
T ss_dssp GGGSHHHHHHHHCHHHHHHHHHHCGGGGSTTCC
T ss_pred HHhhcchHHHHhhHHHHHHHHHHHHHHHHhccc
Confidence 345666666666566678899988877665543
No 22
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=75.46 E-value=20 Score=26.49 Aligned_cols=94 Identities=10% Similarity=0.149 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHH
Q psy9227 58 WDRERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFK 137 (156)
Q Consensus 58 ~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~ 137 (156)
++.++-.|+...+.++.++..+-+.-..+................. ....+...=..+|+.+--+.--=..+++++.++
T Consensus 388 ~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~ 466 (488)
T 3eml_A 388 QKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMY-LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR 466 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHH-HHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHh
Confidence 4455556777777777777776666666666554432222111111 223344444557777777777778899999999
Q ss_pred hhcccccccCCCCCC
Q psy9227 138 QVLPFFSSAGGASSR 152 (156)
Q Consensus 138 ~~~~~~~~~~~~~~~ 152 (156)
+.++|......+...
T Consensus 467 ~~~~~~~~~~~~~~~ 481 (488)
T 3eml_A 467 SHVLRQQEPFKAHHH 481 (488)
T ss_dssp HTTSCC---------
T ss_pred hcccccCCCCCCCCC
Confidence 999887766655443
No 23
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=72.03 E-value=26 Score=25.52 Aligned_cols=94 Identities=10% Similarity=0.137 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHH
Q psy9227 57 EWDRERKKRTNRMLIAMVFIFGFCWSPINVINLVNDLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEF 136 (156)
Q Consensus 57 ~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~ 136 (156)
.++.++-.|+...+.++.++..+-+.-..+................ .....+...=..+|+.+--+.--=..+++++.+
T Consensus 346 ~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~ 424 (447)
T 4eiy_A 346 LQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLM-YLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 424 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHH-HHHHHHHHHHhccchhhhHhccHHHHHHHHHHH
Confidence 4444555566666666666666655555555554332222211111 122334444455777777777777889999999
Q ss_pred HhhcccccccCCCCC
Q psy9227 137 KQVLPFFSSAGGASS 151 (156)
Q Consensus 137 ~~~~~~~~~~~~~~~ 151 (156)
++..++......+.+
T Consensus 425 ~~~~~r~~~~~~~~~ 439 (447)
T 4eiy_A 425 RSHVLRQQEPFKAHH 439 (447)
T ss_dssp HHTC-----------
T ss_pred HHHHhccCCCCCCCC
Confidence 998877666554433
No 24
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=65.26 E-value=6 Score=18.70 Aligned_cols=21 Identities=14% Similarity=0.311 Sum_probs=11.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHhh
Q psy9227 23 IIPFFII-AFCYIKVSLKLNDR 43 (156)
Q Consensus 23 ~lPl~v~-~~~y~~i~~~l~~~ 43 (156)
++|++++ ++.|..+++-=+|+
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr 27 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKR 27 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHH
Confidence 3444444 45566666554443
No 25
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=63.10 E-value=11 Score=17.77 Aligned_cols=22 Identities=14% Similarity=0.326 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy9227 15 TIMAFSQFIIPFFIIAFCYIKV 36 (156)
Q Consensus 15 ~~~~~~~~~lPl~v~~~~y~~i 36 (156)
.+...++.++|.+..+..|++.
T Consensus 8 fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 8 LIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhee
Confidence 3455667789999999999864
No 26
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=55.61 E-value=6.4 Score=16.54 Aligned_cols=13 Identities=38% Similarity=0.731 Sum_probs=9.7
Q ss_pred HHHHHHHHhhccc
Q psy9227 130 DNFRKEFKQVLPF 142 (156)
Q Consensus 130 ~~fr~~~~~~~~~ 142 (156)
++||+.+++++..
T Consensus 4 krfrkkfkklfkk 16 (27)
T 2ket_A 4 KRFRKKFKKLFKK 16 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5788888887754
No 27
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=49.38 E-value=39 Score=23.03 Aligned_cols=6 Identities=17% Similarity=0.628 Sum_probs=2.3
Q ss_pred HHHHHH
Q psy9227 131 NFRKEF 136 (156)
Q Consensus 131 ~fr~~~ 136 (156)
++++-+
T Consensus 294 ~~~~~l 299 (315)
T 4amj_A 294 AFKRLL 299 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 334333
No 28
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=48.00 E-value=78 Score=23.10 Aligned_cols=129 Identities=14% Similarity=0.103 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy9227 12 IYGTIMAFSQFIIPFFIIAFCYIKVSLKLNDRAKLKPGSKNLRREEWDRERKKRTNRMLIAMVFIFGFCWSPINVINLVN 91 (156)
Q Consensus 12 ~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~v~~~P~~i~~l~~ 91 (156)
.+........+++-+++-+..-+..+..+.++.++. ....+..+++++..+....++++ ++..+-.+.-..+.
T Consensus 284 ~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~v-v~~F~i~w~P~~i~ 356 (434)
T 4ea3_A 284 YWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGV------RLLSGSREKDRNLRRITRLVLVV-VAVFVGCWTPVQVF 356 (434)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTC------SSCSSCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------cccccchhhHHHHhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 344445555555555565666666666666654321 12333444454455544444433 33333333333322
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHhhhhhhHHHHHhcCHHHHHHHHhhcccccccCC
Q psy9227 92 DLHEDVAGWFYYYVVFFITHSIAMSSTCYNPFLYAWLNDNFRKEFKQVLPFFSSAGG 148 (156)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~iY~~~~~~fr~~~~~~~~~~~~~~~ 148 (156)
................ ....+...-..+||.+=-+..--+.+.+|+.++...++..
T Consensus 357 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~ 412 (434)
T 4ea3_A 357 VLAQGLGVQPSSETAV-AILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASA 412 (434)
T ss_dssp HHHHHTTCCCCSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC-------
T ss_pred HHHHHhccCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 2211111111111111 1122222234567777666666778888887766555433
No 29
>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}
Probab=37.36 E-value=8 Score=19.75 Aligned_cols=11 Identities=18% Similarity=0.154 Sum_probs=6.8
Q ss_pred HHHHHHHHHHH
Q psy9227 61 ERKKRTNRMLI 71 (156)
Q Consensus 61 ~~~~k~~~~~~ 71 (156)
+++.|+++|.+
T Consensus 41 rAkiKTVKMT~ 51 (52)
T 2jx4_A 41 AALAKTVRLTC 51 (52)
T ss_dssp HHHHHHHHHHC
T ss_pred hHHHhhhhhcc
Confidence 45667777654
No 30
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=37.35 E-value=1.3e+02 Score=22.55 Aligned_cols=31 Identities=10% Similarity=0.255 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9227 12 IYGTIMAFSQFIIPFFIIAFCYIKVSLKLND 42 (156)
Q Consensus 12 ~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~ 42 (156)
...++.+++-+++-++.-...+..+.+..++
T Consensus 351 ~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~ 381 (514)
T 3sn6_R 351 ASSIVSFYVPLVIMVFVYSRVFQEAKRQLQK 381 (514)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3344444444444444555555555554443
No 31
>1v54_L VIIIA, cytochrome C oxidase polypeptide VIIC; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.6.1 PDB: 1oco_L* 1occ_L* 1ocz_L* 1ocr_L* 1v55_L* 2dyr_L* 2dys_L* 2eij_L* 2eik_L* 2eil_L* 2eim_L* 2ein_L* 2occ_L* 2ybb_W* 2zxw_L* 3abk_L* 3abl_L* 3abm_L* 3ag1_L* 3ag2_L* ...
Probab=34.83 E-value=46 Score=16.61 Aligned_cols=19 Identities=47% Similarity=0.616 Sum_probs=13.4
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy9227 10 LLIYGTIMAFSQFIIPFFI 28 (156)
Q Consensus 10 ~~~y~~~~~~~~~~lPl~v 28 (156)
..+.....+...|.+|+++
T Consensus 21 ~~~~~~~f~g~GF~~PF~i 39 (47)
T 1v54_L 21 LLAMMTLFFGSGFAAPFFI 39 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHH
Confidence 3445566788889999864
No 32
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=32.49 E-value=55 Score=16.88 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9227 10 LLIYGTIMAFSQFIIPFFIIAFCYIKVSLKLND 42 (156)
Q Consensus 10 ~~~y~~~~~~~~~~lPl~v~~~~y~~i~~~l~~ 42 (156)
...+.++..++.-++-+.++++.-.+....-|+
T Consensus 10 vp~wiIi~svl~GLllL~li~~~LwK~GFFkR~ 42 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRN 42 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 344555555555555566666665566655433
No 33
>2y69_L Cytochrome C oxidase subunit 7C; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=31.37 E-value=63 Score=17.21 Aligned_cols=19 Identities=47% Similarity=0.616 Sum_probs=13.5
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy9227 10 LLIYGTIMAFSQFIIPFFI 28 (156)
Q Consensus 10 ~~~y~~~~~~~~~~lPl~v 28 (156)
..+.....+...|.+|+++
T Consensus 37 ~~~~~~~f~g~GF~~PF~i 55 (63)
T 2y69_L 37 LLAMMTLFFGSGFAAPFFI 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHH
Confidence 3444557888889999864
No 34
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=23.63 E-value=1.9e+02 Score=20.12 Aligned_cols=23 Identities=13% Similarity=0.132 Sum_probs=10.2
Q ss_pred hhhhhhHHHHHhcCHHHHHHHHh
Q psy9227 116 SSTCYNPFLYAWLNDNFRKEFKQ 138 (156)
Q Consensus 116 ~ns~~nP~iY~~~~~~fr~~~~~ 138 (156)
+|+.+--+.--=..+++++.+++
T Consensus 300 ~NPiiY~~~~~~fR~~~~~~~~~ 322 (364)
T 2ks9_A 300 YNPIIYCCLNDRFRLGFKHAFRC 322 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhHHHHHHHHHHHhh
Confidence 44444433333344555555543
No 35
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=21.64 E-value=69 Score=17.51 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhhhh-hhHHHHHhcCH
Q psy9227 106 VFFITHSIAMSSTC-YNPFLYAWLND 130 (156)
Q Consensus 106 ~~~~~~~l~~~ns~-~nP~iY~~~~~ 130 (156)
+..++.-|+.=.+= +||-+|.+.++
T Consensus 27 AL~IAK~LGlktAK~VNp~LY~m~~~ 52 (72)
T 3eyi_A 27 ALVIAQALGMRTAKDVNRDLYRMKSR 52 (72)
T ss_dssp HHHHHHHTTCCSGGGTHHHHHHHHHT
T ss_pred HHHHHHHhCcchhhhcCHHHHHHHHc
Confidence 45677777777777 99999988653
No 36
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=20.56 E-value=1e+02 Score=15.88 Aligned_cols=29 Identities=3% Similarity=0.171 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9227 11 LIYGTIMAFSQFIIPFFIIAFCYIKVSLK 39 (156)
Q Consensus 11 ~~y~~~~~~~~~~lPl~v~~~~y~~i~~~ 39 (156)
..+.++..++.-++-++++++.-.+....
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFF 36 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFF 36 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 34445555555555555555555566555
Done!