RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9230
         (361 letters)



>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020)
           {Escherichia coli [TaxId: 562]}
          Length = 190

 Score = 27.4 bits (61), Expect = 2.4
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 28  LLDLSTPYTFGRWSVAALLLIFFLARIYLLQGW 60
           L  L  P     W  + + L +   + Y  +GW
Sbjct: 83  LFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGW 115


>d1i3oe_ g.52.1.1 (E:) BIR domains of XIAP {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 111

 Score = 25.2 bits (55), Expect = 6.6
 Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 8/46 (17%)

Query: 212 TTYHLQYLLSCPQRNNDDDMQLPTR---ASEEFRPFIRRLPEFKFW 254
           +  H  YLL   Q  +  D   P      SEE      RL  F+ W
Sbjct: 7   SETHADYLLRTGQVVDISDTIYPRNPAMYSEE-----ARLKSFQNW 47


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.331    0.144    0.467 

Gapped
Lambda     K      H
   0.267   0.0442    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,428,161
Number of extensions: 68649
Number of successful extensions: 208
Number of sequences better than 10.0: 1
Number of HSP's gapped: 206
Number of HSP's successfully gapped: 11
Length of query: 361
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 275
Effective length of database: 1,226,816
Effective search space: 337374400
Effective search space used: 337374400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 53 (24.9 bits)