BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9231
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70052|NR2E1_XENLA Nuclear receptor subfamily 2 group E member 1 OS=Xenopus laevis
GN=nr2e1 PE=2 SV=1
Length = 386
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 55 TGITS--MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK--ERGHCIVDV 110
TG TS +D+ CKVCGD++SGKHYGV +CDGC GFFKRSIRRN YVCK +G C VD
Sbjct: 5 TGSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCPVDK 64
Query: 111 TRRNQCQACRFSKCLQVKMNRDAM 134
T RNQC+ACR KCL+V MN+DA+
Sbjct: 65 THRNQCRACRLKKCLEVNMNKDAV 88
>sp|Q64104|NR2E1_MOUSE Nuclear receptor subfamily 2 group E member 1 OS=Mus musculus
GN=Nr2e1 PE=1 SV=1
Length = 385
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 60 MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKE--RGHCIVDVTRRNQCQ 117
+D+ CKVCGD++SGKHYGV +CDGC GFFKRSIRRN YVCK +G C VD T RNQC+
Sbjct: 12 LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCR 71
Query: 118 ACRFSKCLQVKMNRDAM 134
ACR KCL+V MN+DA+
Sbjct: 72 ACRLKKCLEVNMNKDAV 88
>sp|Q9Y466|NR2E1_HUMAN Nuclear receptor subfamily 2 group E member 1 OS=Homo sapiens
GN=NR2E1 PE=2 SV=1
Length = 385
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 60 MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKE--RGHCIVDVTRRNQCQ 117
+D+ CKVCGD++SGKHYGV +CDGC GFFKRSIRRN YVCK +G C VD T RNQC+
Sbjct: 12 LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCR 71
Query: 118 ACRFSKCLQVKMNRDAM 134
ACR KCL+V MN+DA+
Sbjct: 72 ACRLKKCLEVNMNKDAV 88
>sp|Q91379|NR2E1_CHICK Nuclear receptor subfamily 2 group E member 1 OS=Gallus gallus
GN=NR2E1 PE=2 SV=1
Length = 385
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 60 MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKE--RGHCIVDVTRRNQCQ 117
+D+ CKVCGD++SGKHYGV +CDGC GFFKRSIRRN YVCK +G C VD T RNQC+
Sbjct: 12 LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCR 71
Query: 118 ACRFSKCLQVKMNRDAM 134
ACR KCL+V MN+DA+
Sbjct: 72 ACRLKKCLEVNMNKDAV 88
>sp|Q9YGL3|NR2E1_ORYLA Nuclear receptor subfamily 2 group E member 1 OS=Oryzias latipes
GN=nr2e1 PE=2 SV=1
Length = 396
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 60 MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK--ERGHCIVDVTRRNQCQ 117
+D+ CKVCGD++SGKHYGV +CDGC GFFKRSIRRN Y+CK +G C VD T RNQC+
Sbjct: 23 LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRIYLCKSGSQGGCPVDKTHRNQCR 82
Query: 118 ACRFSKCLQVKMNRDAM 134
ACR KCL+V MN+DA+
Sbjct: 83 ACRLKKCLEVNMNKDAV 99
>sp|O16845|TLL_DROVI Protein tailless OS=Drosophila virilis GN=tll PE=3 SV=1
Length = 450
Score = 112 bits (281), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 62 VLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK--ERGHCIVDVTRRNQCQAC 119
V CKVC D +SGKHYG+ +CDGC GFFKRSIRR+ +YVCK ++G C+VD T RNQC+AC
Sbjct: 32 VPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRAC 91
Query: 120 RFSKCLQVKMNRDAM 134
R KC +V MN+DA+
Sbjct: 92 RLRKCFEVGMNKDAV 106
>sp|P18102|TLL_DROME Protein tailless OS=Drosophila melanogaster GN=tll PE=2 SV=1
Length = 452
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 62 VLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK--ERGHCIVDVTRRNQCQAC 119
V CKVC D +SGKHYG+ +CDGC GFFKRSIRR+ +YVCK ++G C+VD T RNQC+AC
Sbjct: 32 VPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRAC 91
Query: 120 RFSKCLQVKMNRDAM 134
R KC +V MN+DA+
Sbjct: 92 RLRKCFEVGMNKDAV 106
>sp|O76202|USP_CHOFU Protein ultraspiracle homolog OS=Choristoneura fumiferana GN=USP
PE=2 SV=1
Length = 472
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C+E +CI+D +RN+CQ CR+
Sbjct: 118 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCIIDKRQRNRCQYCRYQ 177
Query: 123 KCLQVKMNRDAM 134
KCL M R+A+
Sbjct: 178 KCLACGMKREAV 189
>sp|Q9XVV3|NHR67_CAEEL Nuclear hormone receptor family member nhr-67 OS=Caenorhabditis
elegans GN=nhr-67 PE=1 SV=1
Length = 416
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Query: 60 MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKER-----GHCIVDVTRRN 114
+DV C+VC D +SGKHY + SCDGC GFFKRSIRR+ +YVCK + G C VD T RN
Sbjct: 17 LDVDCRVCEDHSSGKHYSIFSCDGCAGFFKRSIRRHRQYVCKNKGSPSEGQCKVDKTHRN 76
Query: 115 QCQACRFSKCLQVKMNRDAM 134
QC+ACR KCL++ MN+DA+
Sbjct: 77 QCRACRLRKCLEIGMNKDAV 96
>sp|P10588|NR2F6_HUMAN Nuclear receptor subfamily 2 group F member 6 OS=Homo sapiens
GN=NR2F6 PE=1 SV=2
Length = 404
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/75 (57%), Positives = 54/75 (72%)
Query: 60 MDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQAC 119
+ V C VCGDK+SGKHYGV +C+GC+ FFKRSIRRNL Y C+ C +D RNQCQ C
Sbjct: 52 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYC 111
Query: 120 RFSKCLQVKMNRDAM 134
R KC +V M ++A+
Sbjct: 112 RLKKCFRVGMRKEAV 126
>sp|Q06725|N2F1A_DANRE Nuclear receptor subfamily 2 group F member 1-A OS=Danio rerio
GN=nr2f1a PE=2 SV=1
Length = 411
Score = 105 bits (262), Expect = 9e-23, Method: Composition-based stats.
Identities = 43/80 (53%), Positives = 57/80 (71%)
Query: 55 TGITSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRN 114
+G + + C VCGDK+SGKHYG +C+GC+ FFKRS+RRNL Y C+ +C +D RN
Sbjct: 67 SGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRN 126
Query: 115 QCQACRFSKCLQVKMNRDAM 134
QCQ CR KCL+V M R+A+
Sbjct: 127 QCQYCRLKKCLKVGMRREAV 146
>sp|Q9Y5X4|NR2E3_HUMAN Photoreceptor-specific nuclear receptor OS=Homo sapiens GN=NR2E3
PE=1 SV=1
Length = 410
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 55 TGITSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK-ERGHCIVDVTRR 113
TG+ S + C+VCGD +SGKHYG+ +C+GC GFFKRS+RR L Y C+ G C VD R
Sbjct: 39 TGV-SPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHR 97
Query: 114 NQCQACRFSKCLQVKMNRDAM 134
NQCQACR KCLQ MN+DA+
Sbjct: 98 NQCQACRLKKCLQAGMNQDAV 118
>sp|Q9TTF0|NR2E3_BOVIN Photoreceptor-specific nuclear receptor OS=Bos taurus GN=NR2E3 PE=1
SV=2
Length = 411
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 64 CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK-ERGHCIVDVTRRNQCQACRFS 122
C+VCGD +SGKHYG+ +C+GC GFFKRS+RR L Y C+ G C VD RNQCQACR
Sbjct: 39 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLK 98
Query: 123 KCLQVKMNRDAM 134
KCLQ MN+DA+
Sbjct: 99 KCLQAGMNQDAV 110
>sp|P49866|HNF4_DROME Transcription factor HNF-4 homolog OS=Drosophila melanogaster
GN=Hnf4 PE=2 SV=2
Length = 666
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 55/72 (76%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD+A+GKHYG SCDGC+GFF+RS+R+N +Y C+ +C+VD +RNQC+ CR
Sbjct: 103 VCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLR 162
Query: 123 KCLQVKMNRDAM 134
KC + M ++A+
Sbjct: 163 KCFKAGMKKEAV 174
>sp|P54779|USP_MANSE Protein ultraspiracle homolog OS=Manduca sexta GN=USP PE=2 SV=1
Length = 461
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C+E +CI+D +RN+CQ CR+
Sbjct: 112 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCIIDKRQRNRCQYCRYQ 171
Query: 123 KCLQVKMNRDAM 134
KCL M R+A+
Sbjct: 172 KCLACGMKREAV 183
>sp|P49700|USP_BOMMO Protein ultraspiracle homolog OS=Bombyx mori GN=USP PE=2 SV=1
Length = 462
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C+E +CI+D +RN+CQ CR+
Sbjct: 113 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDKNCIIDKRQRNRCQYCRYQ 172
Query: 123 KCLQVKMNRDAM 134
KCL M R+A+
Sbjct: 173 KCLACGMKREAV 184
>sp|Q06726|NR2F5_DANRE Nuclear receptor subfamily 2 group F member 5 OS=Danio rerio
GN=nr2f5 PE=2 SV=1
Length = 403
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 61 DVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACR 120
+V C VCGDK+SGKHYG +C+GC+ FFKRS+RRNL Y C+ C +D RNQCQ CR
Sbjct: 51 NVDCMVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRGNRDCPIDQHHRNQCQYCR 110
Query: 121 FSKCLQVKMNRDAM 134
KCL+V M R+A+
Sbjct: 111 LKKCLKVGMRREAV 124
>sp|P16376|7UP2_DROME Steroid receptor seven-up, isoform A OS=Drosophila melanogaster
GN=svp PE=2 SV=3
Length = 746
Score = 103 bits (257), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 58 TSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQ 117
+ ++ C VCGDK+SGKHYG +C+GC+ FFKRS+RRNL Y C+ +C +D RNQCQ
Sbjct: 194 SKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQ 253
Query: 118 ACRFSKCLQVKMNRDAM 134
CR KCL++ M R+A+
Sbjct: 254 YCRLKKCLKMGMRREAV 270
>sp|P20153|USP_DROME Protein ultraspiracle OS=Drosophila melanogaster GN=usp PE=1 SV=1
Length = 508
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C+E +CI+D +RN+CQ CR+
Sbjct: 103 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQ 162
Query: 123 KCLQVKMNRDAM 134
KCL M R+A+
Sbjct: 163 KCLTCGMKREAV 174
>sp|P49116|NR2C2_HUMAN Nuclear receptor subfamily 2 group C member 2 OS=Homo sapiens
GN=NR2C2 PE=1 SV=1
Length = 596
Score = 103 bits (256), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 64 CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSK 123
C VCGDKASG+HYG SC+GC+GFFKRS+R+NL Y C+ CI++ RN+CQ CR K
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 176
Query: 124 CLQVKMNRDAM 134
CL++ M +++
Sbjct: 177 CLEMGMKMESV 187
>sp|P49117|NR2C2_MOUSE Nuclear receptor subfamily 2 group C member 2 OS=Mus musculus
GN=Nr2c2 PE=1 SV=1
Length = 596
Score = 103 bits (256), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 64 CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSK 123
C VCGDKASG+HYG SC+GC+GFFKRS+R+NL Y C+ CI++ RN+CQ CR K
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKK 176
Query: 124 CLQVKMNRDAM 134
CL++ M +++
Sbjct: 177 CLEMGMKMESV 187
>sp|P55094|NR2C2_RAT Nuclear receptor subfamily 2 group C member 2 OS=Rattus norvegicus
GN=Nr2c2 PE=2 SV=1
Length = 596
Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 64 CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSK 123
C VCGDKASG+HYG SC+GC+GFFKRS+R+NL Y C+ CI++ RN+CQ CR K
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKK 176
Query: 124 CLQVKMNRDAM 134
CL++ M +++
Sbjct: 177 CLEMGMKMESV 187
>sp|Q5BJR8|RXRG_RAT Retinoic acid receptor RXR-gamma OS=Rattus norvegicus GN=Rxrg PE=2
SV=1
Length = 463
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 14/122 (11%)
Query: 27 PGVSTMVKASLRTLLFISMSS---FFPVFVWTGITSMDV-----------LCKVCGDKAS 72
PG++ +V S + + S+SS P+ GI +M+ +C +CGD++S
Sbjct: 88 PGINLVVPPSSQLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSS 147
Query: 73 GKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSKCLQVKMNRD 132
GKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+ KCL + M R+
Sbjct: 148 GKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKRE 207
Query: 133 AM 134
A+
Sbjct: 208 AV 209
>sp|Q6GN21|N2C1A_XENLA Nuclear receptor subfamily 2 group C member 1-A OS=Xenopus laevis
GN=nr2c1-a PE=2 SV=1
Length = 637
Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC VCGDKASG+HYG +C+GC+GFFKRSIR+NL Y C+ C+++ RN+CQ CR
Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQ 210
Query: 123 KCLQVKMNRDAM 134
+C+ + M +D++
Sbjct: 211 RCMSLGMKQDSV 222
>sp|P28700|RXRA_MOUSE Retinoic acid receptor RXR-alpha OS=Mus musculus GN=Rxra PE=1 SV=1
Length = 467
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query: 6 LPLAETIDHGRKNTQINFFILPGVSTMVKASLRTLLFISMSSFFPVFVWTGITSMDV-LC 64
+P T+ G + Q+N + P ST ++ L ++ P + S +C
Sbjct: 84 VPTTPTLGFGTGSPQLNSPMNPVSST---EDIKPPLGLNGVLKVPAHPSGNMASFTKHIC 140
Query: 65 KVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSKC 124
+CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C++D +RN+CQ CR+ KC
Sbjct: 141 AICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKC 200
Query: 125 LQVKMNRDAM 134
L + M R+A+
Sbjct: 201 LAMGMKREAV 210
>sp|Q90417|RXRBB_DANRE Retinoic acid receptor RXR-beta-B OS=Danio rerio GN=rxrbb PE=2 SV=1
Length = 422
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 60/78 (76%)
Query: 57 ITSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQC 116
+ S +C +CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C+VD +RN+C
Sbjct: 83 MLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRC 142
Query: 117 QACRFSKCLQVKMNRDAM 134
Q CR+ KCL + M R+A+
Sbjct: 143 QYCRYQKCLAMGMKREAV 160
>sp|Q28CK1|NR2C1_XENTR Nuclear receptor subfamily 2 group C member 1 OS=Xenopus tropicalis
GN=nr2c1 PE=2 SV=1
Length = 636
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC VCGDKASG+HYG +C+GC+GFFKRSIR+NL Y C+ C+++ RN+CQ CR
Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQ 210
Query: 123 KCLQVKMNRDAM 134
+C+ + M +D++
Sbjct: 211 RCIALGMKQDSV 222
>sp|A2T929|RXRAA_DANRE Retinoic acid receptor RXR-alpha-A OS=Danio rerio GN=rxraa PE=2
SV=2
Length = 430
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C++D +RN+CQ CR+
Sbjct: 102 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 161
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 162 KCLAMGMKREAV 173
>sp|P45446|RORB_RAT Nuclear receptor ROR-beta OS=Rattus norvegicus GN=Rorb PE=1 SV=3
Length = 470
Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 56 GITSMDVL-CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRN 114
G ++V+ CK+CGDK+SG HYGV +C+GC+GFF+RS + N Y C + +C++D T RN
Sbjct: 12 GTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN 71
Query: 115 QCQACRFSKCLQVKMNRDAM 134
+CQ CR KCL + M+RDA+
Sbjct: 72 RCQHCRLQKCLALGMSRDAV 91
>sp|Q8R1B8|RORB_MOUSE Nuclear receptor ROR-beta OS=Mus musculus GN=Rorb PE=2 SV=3
Length = 470
Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 56 GITSMDVL-CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRN 114
G ++V+ CK+CGDK+SG HYGV +C+GC+GFF+RS + N Y C + +C++D T RN
Sbjct: 12 GTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN 71
Query: 115 QCQACRFSKCLQVKMNRDAM 134
+CQ CR KCL + M+RDA+
Sbjct: 72 RCQHCRLQKCLALGMSRDAV 91
>sp|Q05343|RXRA_RAT Retinoic acid receptor RXR-alpha OS=Rattus norvegicus GN=Rxra PE=2
SV=1
Length = 467
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C++D +RN+CQ CR+
Sbjct: 139 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQ 198
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 199 KCLAMGMKREAV 210
>sp|Q6DHP9|RXRGB_DANRE Retinoic acid receptor RXR-gamma-B OS=Danio rerio GN=rxrgb PE=2
SV=1
Length = 452
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+
Sbjct: 127 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYCRYQ 186
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 187 KCLAMGMKREAV 198
>sp|Q7SYN5|RXRBA_DANRE Retinoic acid receptor RXR-beta-A OS=Danio rerio GN=rxrba PE=2 SV=1
Length = 471
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 59/78 (75%)
Query: 57 ITSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQC 116
+ S LC +CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C+VD +RN+C
Sbjct: 118 MVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRC 177
Query: 117 QACRFSKCLQVKMNRDAM 134
Q CR+ KCL + M R+ +
Sbjct: 178 QYCRYQKCLAMGMKREVV 195
>sp|P19793|RXRA_HUMAN Retinoic acid receptor RXR-alpha OS=Homo sapiens GN=RXRA PE=1 SV=1
Length = 462
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C++D +RN+CQ CR+
Sbjct: 134 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQ 193
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 194 KCLAMGMKREAV 205
>sp|Q8T5C6|RXR_BIOGL Retinoic acid receptor RXR OS=Biomphalaria glabrata GN=RXR PE=1
SV=1
Length = 436
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 59/72 (81%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C++ +C++D +RN+CQ CR+
Sbjct: 116 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRNRCQYCRYM 175
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 176 KCLSMGMKREAV 187
>sp|Q5I7G2|RXR_LYMST Retinoic acid receptor RXR OS=Lymnaea stagnalis GN=RXR PE=1 SV=1
Length = 436
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 59/72 (81%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C++ +C++D +RN+CQ CR+
Sbjct: 116 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRNRCQYCRYM 175
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 176 KCLSMGMKREAV 187
>sp|Q66J63|N2C1B_XENLA Nuclear receptor subfamily 2 group C member 1-B OS=Xenopus laevis
GN=nr2c1-b PE=2 SV=1
Length = 637
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
LC VCGDKASG+HYG +C+GC+GFFKRSIR+NL Y C+ C+++ RN+CQ CR
Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLIYTCRGSKDCVINKHYRNRCQYCRLQ 210
Query: 123 KCLQVKMNRDAM 134
+C+ + M +D++
Sbjct: 211 RCISLGMKQDSV 222
>sp|P51129|RXRG_XENLA Retinoic acid receptor RXR-gamma OS=Xenopus laevis GN=rxrg PE=2
SV=1
Length = 470
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+
Sbjct: 145 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDKRQRNRCQYCRYQ 204
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 205 KCLAMGMKREAV 216
>sp|Q5REL6|RXRG_PONAB Retinoic acid receptor RXR-gamma OS=Pongo abelii GN=RXRG PE=2 SV=1
Length = 463
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 27 PGVSTMVKASLRTLLFISMSS---FFPVFVWTGITSMDV-----------LCKVCGDKAS 72
PG++ + S + + S+SS P+ GI +M+ +C +CGD++S
Sbjct: 88 PGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSS 147
Query: 73 GKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSKCLQVKMNRD 132
GKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+ KCL + M R+
Sbjct: 148 GKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKRE 207
Query: 133 AM 134
A+
Sbjct: 208 AV 209
>sp|P48443|RXRG_HUMAN Retinoic acid receptor RXR-gamma OS=Homo sapiens GN=RXRG PE=1 SV=1
Length = 463
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 27 PGVSTMVKASLRTLLFISMSS---FFPVFVWTGITSMDV-----------LCKVCGDKAS 72
PG++ + S + + S+SS P+ GI +M+ +C +CGD++S
Sbjct: 88 PGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSS 147
Query: 73 GKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSKCLQVKMNRD 132
GKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+ KCL + M R+
Sbjct: 148 GKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKRE 207
Query: 133 AM 134
A+
Sbjct: 208 AV 209
>sp|P28701|RXRG_CHICK Retinoic acid receptor RXR-gamma OS=Gallus gallus GN=RXRG PE=2 SV=1
Length = 467
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+
Sbjct: 142 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQ 201
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 202 KCLAMGMKREAV 213
>sp|P28705|RXRG_MOUSE Retinoic acid receptor RXR-gamma OS=Mus musculus GN=Rxrg PE=2 SV=2
Length = 463
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 27 PGVSTMVKASLRTLLFISMSS---FFPVFVWTGITSMDV-----------LCKVCGDKAS 72
PG++ + S + + S+SS P+ GI +M+ +C +CGD++S
Sbjct: 88 PGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSS 147
Query: 73 GKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSKCLQVKMNRD 132
GKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+ KCL + M R+
Sbjct: 148 GKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKRE 207
Query: 133 AM 134
A+
Sbjct: 208 AV 209
>sp|Q92753|RORB_HUMAN Nuclear receptor ROR-beta OS=Homo sapiens GN=RORB PE=2 SV=3
Length = 470
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 64 CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFSK 123
CK+CGDK+SG HYGV +C+GC+GFF+RS + N Y C + +C++D T RN+CQ CR K
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 124 CLQVKMNRDAM 134
CL + M+RDA+
Sbjct: 81 CLALGMSRDAV 91
>sp|P20393|NR1D1_HUMAN Nuclear receptor subfamily 1 group D member 1 OS=Homo sapiens
GN=NR1D1 PE=1 SV=1
Length = 614
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 55 TGITSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYV-CKERGHCIVDVTRR 113
T + M +LCKVCGD ASG HYGV +C+GC+GFF+RSI++N++Y C + +C + R
Sbjct: 123 TKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINR 182
Query: 114 NQCQACRFSKCLQVKMNRDAM 134
N+CQ CRF KCL V M+RDA+
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAV 203
>sp|P45447|E78C_DROME Ecdysone-induced protein 78C OS=Drosophila melanogaster GN=Eip78C
PE=2 SV=3
Length = 866
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%)
Query: 62 VLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRF 121
V CKVCGDKASG HYGV SC+GC+GFF+RSI++ +EY C G C+V RN+CQ CRF
Sbjct: 365 VPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRF 424
Query: 122 SKCLQVKMNRDAM 134
KCL M+RD++
Sbjct: 425 KKCLSAGMSRDSV 437
>sp|P51128|RXRA_XENLA Retinoic acid receptor RXR-alpha OS=Xenopus laevis GN=rxra PE=1
SV=1
Length = 488
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR++R++L Y C++ C++D +RN+CQ CR+
Sbjct: 160 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCMIDKRQRNRCQYCRYQ 219
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 220 KCLAMGMKREAV 231
>sp|Q0GFF6|RXRG_PIG Retinoic acid receptor RXR-gamma OS=Sus scrofa GN=RXRG PE=2 SV=2
Length = 463
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+
Sbjct: 138 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQ 197
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 198 KCLVMGMKREAV 209
>sp|Q0VC20|RXRG_BOVIN Retinoic acid receptor RXR-gamma OS=Bos taurus GN=RXRG PE=2 SV=1
Length = 463
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 63 LCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRNQCQACRFS 122
+C +CGD++SGKHYGV SC+GC+GFFKR+IR++L Y C++ C++D +RN+CQ CR+
Sbjct: 138 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQ 197
Query: 123 KCLQVKMNRDAM 134
KCL + M R+A+
Sbjct: 198 KCLVMGMKREAV 209
>sp|Q9QXZ7|NR2E3_MOUSE Photoreceptor-specific nuclear receptor OS=Mus musculus GN=Nr2e3
PE=1 SV=1
Length = 395
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 64 CKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCK-ERGHCIVDVTRRNQCQACRFS 122
C+VCGD +SGKHYG+ +C+GC GFFKRS+RR L Y C+ G C VD RNQCQACR
Sbjct: 40 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLK 99
Query: 123 KCLQVKMNRDAM 134
KCLQ MN+DA+
Sbjct: 100 KCLQAGMNQDAV 111
>sp|Q60632|COT1_MOUSE COUP transcription factor 1 OS=Mus musculus GN=Nr2f1 PE=2 SV=2
Length = 422
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%)
Query: 55 TGITSMDVLCKVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKERGHCIVDVTRRN 114
+G + + C VCGDK+SGKHYG +C+GC+ FFKRS+RRNL Y C+ +C +D RN
Sbjct: 76 SGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRN 135
Query: 115 QCQACRFSKCLQVKMNRDAM 134
QCQ CR KCL+V M R+A+
Sbjct: 136 QCQYCRLKKCLKVGMRREAV 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.140 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,750,870
Number of Sequences: 539616
Number of extensions: 1692339
Number of successful extensions: 5015
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4414
Number of HSP's gapped (non-prelim): 481
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)