Query psy925
Match_columns 69
No_of_seqs 114 out of 1082
Neff 10.5
Searched_HMMs 46136
Date Fri Aug 16 22:39:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy925.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/925hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0197|consensus 99.8 1.1E-20 2.3E-25 110.2 8.2 65 3-67 401-465 (468)
2 KOG1026|consensus 99.8 1.4E-18 3E-23 105.7 7.4 65 3-67 702-766 (774)
3 KOG4257|consensus 99.7 3.7E-18 8.1E-23 102.8 3.7 65 2-66 588-652 (974)
4 KOG0196|consensus 99.7 2.3E-17 4.9E-22 100.8 6.8 66 1-66 828-894 (996)
5 KOG4278|consensus 99.7 5.5E-17 1.2E-21 98.2 7.5 65 3-67 463-527 (1157)
6 KOG0200|consensus 99.7 6.2E-16 1.3E-20 93.4 8.3 63 3-65 518-581 (609)
7 KOG1095|consensus 99.7 3.6E-16 7.9E-21 97.7 7.2 64 3-66 901-964 (1025)
8 KOG1024|consensus 99.7 7.1E-16 1.5E-20 89.3 7.0 64 3-66 495-558 (563)
9 KOG0192|consensus 99.6 9E-15 2E-19 84.1 8.0 66 1-66 240-306 (362)
10 KOG0199|consensus 99.5 2.4E-14 5.2E-19 87.5 6.2 57 3-59 312-368 (1039)
11 PHA02988 hypothetical protein; 99.5 4.2E-13 9.1E-18 74.6 7.4 64 1-64 216-280 (283)
12 KOG1025|consensus 99.5 4.6E-13 1E-17 83.1 7.2 65 1-65 894-959 (1177)
13 PF07714 Pkinase_Tyr: Protein 99.4 2.2E-13 4.8E-18 74.7 5.2 58 3-60 202-259 (259)
14 KOG0194|consensus 99.4 1.1E-12 2.4E-17 77.5 7.6 65 2-66 358-423 (474)
15 cd05116 PTKc_Syk Catalytic dom 99.4 7.5E-13 1.6E-17 72.3 6.5 62 3-64 195-256 (257)
16 cd05064 PTKc_EphR_A10 Catalyti 99.4 1.4E-12 3.1E-17 71.6 7.3 62 2-63 204-265 (266)
17 cd05115 PTKc_Zap-70 Catalytic 99.4 3.3E-12 7.1E-17 70.0 7.1 62 3-64 195-256 (257)
18 cd05048 PTKc_Ror Catalytic Dom 99.4 4.5E-12 9.7E-17 69.9 6.4 60 3-62 223-282 (283)
19 cd05045 PTKc_RET Catalytic dom 99.4 1.1E-11 2.5E-16 68.7 8.0 64 3-66 226-289 (290)
20 cd05052 PTKc_Abl Catalytic dom 99.3 1.8E-11 4E-16 67.0 7.5 61 3-63 202-262 (263)
21 cd05075 PTKc_Axl Catalytic dom 99.3 1.6E-11 3.4E-16 67.4 7.2 61 3-63 211-271 (272)
22 cd05148 PTKc_Srm_Brk Catalytic 99.3 1.4E-11 3E-16 67.2 6.9 60 3-62 201-260 (261)
23 cd05043 PTK_Ryk Pseudokinase d 99.3 2.2E-11 4.8E-16 67.1 7.7 63 3-65 216-278 (280)
24 cd05091 PTKc_Ror2 Catalytic do 99.3 1.5E-11 3.3E-16 67.9 6.5 60 3-62 223-282 (283)
25 cd05111 PTK_HER3 Pseudokinase 99.3 4.8E-11 1E-15 66.0 8.1 64 3-66 208-271 (279)
26 KOG0193|consensus 99.3 2.9E-12 6.2E-17 77.2 3.0 65 1-65 587-655 (678)
27 cd05089 PTKc_Tie1 Catalytic do 99.3 5.3E-11 1.1E-15 66.4 7.9 64 3-66 215-278 (297)
28 cd05114 PTKc_Tec_Rlk Catalytic 99.3 3.6E-11 7.8E-16 65.6 6.8 58 3-60 198-255 (256)
29 cd05067 PTKc_Lck_Blk Catalytic 99.3 2.8E-11 6.1E-16 66.1 6.4 60 3-62 200-259 (260)
30 cd05033 PTKc_EphR Catalytic do 99.3 7E-11 1.5E-15 64.8 7.7 61 3-63 205-265 (266)
31 cd05072 PTKc_Lyn Catalytic dom 99.3 4.4E-11 9.4E-16 65.4 6.8 60 3-62 201-260 (261)
32 cd05060 PTKc_Syk_like Catalyti 99.3 3.7E-11 8.1E-16 65.6 6.5 62 3-64 195-256 (257)
33 cd05108 PTKc_EGFR Catalytic do 99.3 6.4E-11 1.4E-15 66.6 7.5 64 3-66 208-271 (316)
34 cd05101 PTKc_FGFR2 Catalytic d 99.2 9.8E-11 2.1E-15 65.4 8.1 64 3-66 236-299 (304)
35 KOG4721|consensus 99.2 5.2E-12 1.1E-16 76.4 2.8 63 1-63 305-368 (904)
36 cd05063 PTKc_EphR_A2 Catalytic 99.2 9.8E-11 2.1E-15 64.2 7.6 61 3-63 207-267 (268)
37 cd05058 PTKc_Met_Ron Catalytic 99.2 1.2E-10 2.6E-15 63.6 7.8 63 3-65 199-261 (262)
38 cd05035 PTKc_Axl_like Catalyti 99.2 9.2E-11 2E-15 64.3 7.1 61 3-63 212-272 (273)
39 cd05093 PTKc_TrkB Catalytic do 99.2 1.2E-10 2.7E-15 64.6 7.7 65 3-67 219-283 (288)
40 cd05102 PTKc_VEGFR3 Catalytic 99.2 8.4E-11 1.8E-15 66.6 7.1 64 3-66 273-337 (338)
41 cd05098 PTKc_FGFR1 Catalytic d 99.2 1.7E-10 3.6E-15 64.6 8.2 65 3-67 239-303 (307)
42 cd05047 PTKc_Tie Catalytic dom 99.2 9E-11 2E-15 64.6 7.0 62 3-64 208-269 (270)
43 cd05053 PTKc_FGFR Catalytic do 99.2 1.5E-10 3.3E-15 64.2 7.9 62 3-64 231-292 (293)
44 cd05056 PTKc_FAK Catalytic dom 99.2 1.5E-10 3.3E-15 63.6 7.8 65 2-66 204-268 (270)
45 cd05094 PTKc_TrkC Catalytic do 99.2 1.3E-10 2.9E-15 64.5 7.6 64 3-66 222-285 (291)
46 cd05066 PTKc_EphR_A Catalytic 99.2 1.2E-10 2.7E-15 63.9 7.4 61 3-63 206-266 (267)
47 cd05032 PTKc_InsR_like Catalyt 99.2 8.6E-11 1.9E-15 64.6 6.7 59 3-61 218-276 (277)
48 cd05057 PTKc_EGFR_like Catalyt 99.2 1.9E-10 4.1E-15 63.5 8.0 64 3-66 208-271 (279)
49 cd05065 PTKc_EphR_B Catalytic 99.2 1E-10 2.3E-15 64.2 6.9 61 3-63 208-268 (269)
50 cd05068 PTKc_Frk_like Catalyti 99.2 7.8E-11 1.7E-15 64.4 6.3 60 3-62 201-260 (261)
51 cd05082 PTKc_Csk Catalytic dom 99.2 1.1E-10 2.3E-15 63.8 6.6 60 3-62 196-255 (256)
52 cd05069 PTKc_Yes Catalytic dom 99.2 1.1E-10 2.4E-15 63.9 6.6 60 3-62 200-259 (260)
53 cd05083 PTKc_Chk Catalytic dom 99.2 1.2E-10 2.6E-15 63.5 6.5 59 3-61 194-252 (254)
54 cd05049 PTKc_Trk Catalytic dom 99.2 1.5E-10 3.2E-15 63.8 6.7 59 3-61 221-279 (280)
55 cd05034 PTKc_Src_like Catalyti 99.2 1.6E-10 3.5E-15 63.1 6.7 60 3-62 201-260 (261)
56 KOG1094|consensus 99.2 6.8E-11 1.5E-15 71.6 5.5 61 3-63 737-804 (807)
57 cd05073 PTKc_Hck Catalytic dom 99.2 1.8E-10 3.8E-15 63.1 6.7 60 3-62 200-259 (260)
58 cd05090 PTKc_Ror1 Catalytic do 99.2 2E-10 4.2E-15 63.6 6.8 60 3-62 223-282 (283)
59 cd05100 PTKc_FGFR3 Catalytic d 99.2 3.8E-10 8.2E-15 63.9 8.1 64 3-66 233-296 (334)
60 cd05071 PTKc_Src Catalytic dom 99.2 3E-10 6.4E-15 62.4 7.5 62 3-64 200-261 (262)
61 cd05099 PTKc_FGFR4 Catalytic d 99.2 4.7E-10 1E-14 63.0 8.4 63 3-65 233-295 (314)
62 cd05059 PTKc_Tec_like Catalyti 99.2 2.4E-10 5.2E-15 62.4 7.0 58 3-60 198-255 (256)
63 cd05113 PTKc_Btk_Bmx Catalytic 99.2 2.1E-10 4.6E-15 62.8 6.7 58 3-60 198-255 (256)
64 cd05036 PTKc_ALK_LTK Catalytic 99.2 3.4E-10 7.4E-15 62.5 7.5 59 3-61 218-276 (277)
65 cd05109 PTKc_HER2 Catalytic do 99.2 4E-10 8.8E-15 62.2 7.5 63 3-65 208-270 (279)
66 cd05039 PTKc_Csk_like Catalyti 99.1 3.1E-10 6.6E-15 61.9 6.8 60 3-62 196-255 (256)
67 cd00192 PTKc Catalytic domain 99.1 3.1E-10 6.7E-15 61.6 6.8 58 3-60 204-261 (262)
68 cd05110 PTKc_HER4 Catalytic do 99.1 5.8E-10 1.3E-14 62.4 8.0 64 3-66 208-271 (303)
69 cd05107 PTKc_PDGFR_beta Cataly 99.1 3.4E-10 7.4E-15 66.0 7.2 62 3-64 338-400 (401)
70 cd08219 STKc_Nek3 Catalytic do 99.1 2.9E-10 6.2E-15 62.0 6.5 59 1-59 194-252 (255)
71 cd05092 PTKc_TrkA Catalytic do 99.1 3.6E-10 7.7E-15 62.6 6.9 59 3-61 221-279 (280)
72 cd05070 PTKc_Fyn_Yrk Catalytic 99.1 3.9E-10 8.4E-15 61.7 6.9 60 3-62 200-259 (260)
73 cd05044 PTKc_c-ros Catalytic d 99.1 3.6E-10 7.9E-15 61.9 6.8 59 3-61 210-268 (269)
74 cd05050 PTKc_Musk Catalytic do 99.1 4.6E-10 1E-14 62.2 7.1 59 3-61 229-287 (288)
75 cd05088 PTKc_Tie2 Catalytic do 99.1 6.3E-10 1.4E-14 62.3 7.6 64 3-66 220-283 (303)
76 KOG0195|consensus 99.1 1.3E-10 2.8E-15 65.7 4.5 63 2-64 384-447 (448)
77 cd05104 PTKc_Kit Catalytic dom 99.1 3.7E-10 8E-15 65.1 6.5 61 3-63 313-374 (375)
78 cd05085 PTKc_Fer Catalytic dom 99.1 8E-10 1.7E-14 60.0 7.4 58 3-60 191-248 (250)
79 cd05103 PTKc_VEGFR2 Catalytic 99.1 7E-10 1.5E-14 63.2 7.1 64 3-66 278-342 (343)
80 cd05074 PTKc_Tyro3 Catalytic d 99.1 1E-09 2.3E-14 60.2 7.4 61 3-63 212-272 (273)
81 cd05106 PTKc_CSF-1R Catalytic 99.1 6.9E-10 1.5E-14 64.0 6.9 62 3-64 311-373 (374)
82 cd05061 PTKc_InsR Catalytic do 99.1 1E-09 2.2E-14 60.9 7.2 66 3-68 218-283 (288)
83 cd05105 PTKc_PDGFR_alpha Catal 99.1 5.2E-10 1.1E-14 65.2 6.3 63 3-65 336-399 (400)
84 cd05041 PTKc_Fes_like Catalyti 99.1 8.6E-10 1.9E-14 59.9 6.5 59 3-61 192-250 (251)
85 cd05062 PTKc_IGF-1R Catalytic 99.1 9.6E-10 2.1E-14 60.7 6.8 59 3-61 218-276 (277)
86 cd05112 PTKc_Itk Catalytic dom 99.1 1.3E-09 2.8E-14 59.4 7.1 58 3-60 198-255 (256)
87 cd08529 STKc_FA2-like Catalyti 99.1 1E-09 2.2E-14 59.7 6.4 57 2-58 196-252 (256)
88 cd05084 PTKc_Fes Catalytic dom 99.1 1.4E-09 3.1E-14 59.2 6.8 59 3-61 193-251 (252)
89 cd05054 PTKc_VEGFR Catalytic d 99.0 1.9E-09 4E-14 61.5 7.1 64 3-66 272-336 (337)
90 cd08218 STKc_Nek1 Catalytic do 99.0 1.5E-09 3.2E-14 59.1 5.9 58 2-59 196-253 (256)
91 cd08228 STKc_Nek6 Catalytic do 99.0 3.4E-09 7.3E-14 58.1 7.1 62 2-63 201-265 (267)
92 cd05040 PTKc_Ack_like Catalyti 99.0 4.1E-09 9E-14 57.4 7.1 59 3-61 197-256 (257)
93 cd05055 PTKc_PDGFR Catalytic d 99.0 3.8E-09 8.3E-14 59.2 7.1 61 3-63 240-301 (302)
94 smart00219 TyrKc Tyrosine kina 99.0 3.3E-09 7.1E-14 57.6 6.5 57 3-59 201-257 (258)
95 cd06628 STKc_MAPKKK_Byr2_like 99.0 3.2E-09 6.8E-14 58.2 6.4 58 1-58 206-263 (267)
96 cd08224 STKc_Nek6_Nek7 Catalyt 99.0 5.4E-09 1.2E-13 57.1 6.7 63 2-64 201-266 (267)
97 cd05096 PTKc_DDR1 Catalytic do 98.9 6.2E-09 1.3E-13 58.2 6.8 59 3-61 238-303 (304)
98 cd08217 STKc_Nek2 Catalytic do 98.9 3.8E-09 8.2E-14 57.5 5.8 57 2-58 205-261 (265)
99 cd08528 STKc_Nek10 Catalytic d 98.9 6.3E-09 1.4E-13 57.1 6.6 61 1-61 207-268 (269)
100 cd08220 STKc_Nek8 Catalytic do 98.9 3.7E-09 8.1E-14 57.5 5.5 57 2-58 196-252 (256)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.9 7.8E-09 1.7E-13 57.2 6.6 46 19-64 237-282 (283)
102 PTZ00283 serine/threonine prot 98.9 7.1E-09 1.5E-13 62.0 6.3 58 2-59 240-297 (496)
103 cd08223 STKc_Nek4 Catalytic do 98.9 7.9E-09 1.7E-13 56.3 6.0 58 1-58 196-253 (257)
104 cd06642 STKc_STK25-YSK1 Cataly 98.9 7.7E-09 1.7E-13 57.1 5.9 58 1-58 195-252 (277)
105 cd06640 STKc_MST4 Catalytic do 98.9 4.8E-09 1E-13 57.9 4.9 58 2-59 196-253 (277)
106 cd05095 PTKc_DDR2 Catalytic do 98.9 1.3E-08 2.9E-13 56.7 6.7 59 3-61 230-295 (296)
107 cd08225 STKc_Nek5 Catalytic do 98.9 8.6E-09 1.9E-13 56.1 5.6 58 2-59 197-254 (257)
108 cd06641 STKc_MST3 Catalytic do 98.9 1.4E-08 3.1E-13 56.1 6.5 58 2-59 196-253 (277)
109 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.9 1.5E-08 3.3E-13 56.1 6.3 57 2-60 217-273 (274)
110 cd08221 STKc_Nek9 Catalytic do 98.8 1.4E-08 3E-13 55.4 5.7 58 2-59 196-253 (256)
111 cd08530 STKc_CNK2-like Catalyt 98.8 1.9E-08 4E-13 54.7 6.1 57 2-58 196-252 (256)
112 cd08229 STKc_Nek7 Catalytic do 98.8 2.1E-08 4.5E-13 54.9 6.3 63 2-64 201-266 (267)
113 PTZ00267 NIMA-related protein 98.8 1.7E-08 3.7E-13 60.0 6.3 58 1-58 265-322 (478)
114 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.8 2.4E-08 5.3E-13 54.9 6.5 58 3-61 206-268 (269)
115 cd05077 PTK_Jak1_rpt1 Pseudoki 98.8 1.5E-08 3.2E-13 55.8 5.5 57 2-60 205-261 (262)
116 cd05038 PTKc_Jak_rpt2 Catalyti 98.8 2.4E-08 5.2E-13 55.0 6.4 48 16-63 236-283 (284)
117 cd05097 PTKc_DDR_like Catalyti 98.8 2.8E-08 6.1E-13 55.4 6.6 59 3-61 229-294 (295)
118 cd08215 STKc_Nek Catalytic dom 98.8 2.8E-08 6.1E-13 53.8 6.4 57 2-58 198-254 (258)
119 cd08222 STKc_Nek11 Catalytic d 98.8 2.6E-08 5.7E-13 54.4 6.1 57 2-58 200-256 (260)
120 cd06625 STKc_MEKK3_like Cataly 98.8 2.2E-08 4.8E-13 54.7 5.6 59 1-59 201-260 (263)
121 cd06609 STKc_MST3_like Catalyt 98.8 2.6E-08 5.7E-13 54.8 5.9 58 1-58 192-250 (274)
122 KOG0581|consensus 98.8 3.2E-08 6.9E-13 57.1 6.2 57 2-58 272-334 (364)
123 cd05046 PTK_CCK4 Pseudokinase 98.8 4.9E-08 1.1E-12 53.7 6.6 59 3-61 215-274 (275)
124 cd05051 PTKc_DDR Catalytic dom 98.8 5.9E-08 1.3E-12 53.9 6.5 59 3-61 230-295 (296)
125 cd06611 STKc_SLK_like Catalyti 98.8 4.1E-08 9E-13 54.2 5.8 58 2-59 203-262 (280)
126 cd05086 PTKc_Aatyk2 Catalytic 98.8 8.5E-08 1.8E-12 52.8 6.9 57 3-60 205-266 (268)
127 cd06632 STKc_MEKK1_plant Catal 98.7 4.1E-08 8.9E-13 53.4 5.5 58 1-58 196-254 (258)
128 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.7 3.6E-08 7.8E-13 54.0 5.2 55 4-60 203-257 (258)
129 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.7 5.6E-08 1.2E-12 53.8 6.0 47 17-63 237-283 (284)
130 cd06626 STKc_MEKK4 Catalytic d 98.7 6.2E-08 1.4E-12 52.9 6.1 57 2-58 201-260 (264)
131 cd06643 STKc_SLK Catalytic dom 98.7 4.8E-08 1E-12 54.1 5.7 57 2-58 203-261 (282)
132 smart00750 KIND kinase non-cat 98.7 7.7E-08 1.7E-12 50.1 6.1 67 1-67 98-173 (176)
133 cd06637 STKc_TNIK Catalytic do 98.7 5.4E-08 1.2E-12 53.4 5.7 58 1-58 210-268 (272)
134 cd06605 PKc_MAPKK Catalytic do 98.7 9.6E-08 2.1E-12 52.2 6.2 57 2-58 194-256 (265)
135 cd06636 STKc_MAP4K4_6 Catalyti 98.7 5.6E-08 1.2E-12 53.7 5.2 57 2-58 221-278 (282)
136 cd06631 STKc_YSK4 Catalytic do 98.7 9.1E-08 2E-12 52.4 5.9 57 2-58 203-261 (265)
137 cd06622 PKc_MAPKK_PBS2_like Ca 98.7 9.8E-08 2.1E-12 52.9 5.9 58 2-59 202-262 (286)
138 cd06610 STKc_OSR1_SPAK Catalyt 98.7 7.2E-08 1.6E-12 52.7 5.3 58 1-58 201-263 (267)
139 cd06638 STKc_myosinIIIA Cataly 98.7 9E-08 2E-12 52.9 5.7 58 2-59 224-283 (286)
140 cd06634 STKc_TAO2 Catalytic do 98.7 1.3E-07 2.8E-12 53.2 6.3 59 1-59 208-267 (308)
141 cd05079 PTKc_Jak1_rpt2 Catalyt 98.7 1.7E-07 3.6E-12 52.0 6.6 47 17-63 237-283 (284)
142 KOG0198|consensus 98.7 1E-07 2.2E-12 54.5 5.6 60 1-60 216-277 (313)
143 cd06623 PKc_MAPKK_plant_like C 98.7 1.7E-07 3.7E-12 51.1 6.2 58 2-59 195-256 (264)
144 cd06639 STKc_myosinIIIB Cataly 98.6 1.2E-07 2.5E-12 52.7 5.6 57 2-58 228-286 (291)
145 cd06644 STKc_STK10_LOK Catalyt 98.6 1.9E-07 4.1E-12 52.0 6.4 58 1-58 209-268 (292)
146 cd06607 STKc_TAO Catalytic dom 98.6 1.4E-07 3E-12 52.9 5.7 58 2-59 209-267 (307)
147 PHA02882 putative serine/threo 98.6 1.1E-07 2.4E-12 53.2 5.3 58 1-60 227-293 (294)
148 PLN00034 mitogen-activated pro 98.6 1.4E-07 2.9E-12 54.1 5.6 58 2-59 268-328 (353)
149 cd05609 STKc_MAST Catalytic do 98.6 1.1E-07 2.4E-12 53.3 5.0 60 1-60 210-271 (305)
150 cd05572 STKc_cGK_PKG Catalytic 98.6 1.7E-07 3.6E-12 51.3 5.6 58 1-58 186-251 (262)
151 cd06612 STKc_MST1_2 Catalytic 98.6 9.6E-08 2.1E-12 51.9 4.6 57 2-58 194-252 (256)
152 cd06917 STKc_NAK1_like Catalyt 98.6 1.4E-07 3E-12 52.0 5.3 57 2-58 197-254 (277)
153 cd06635 STKc_TAO1 Catalytic do 98.6 2.1E-07 4.6E-12 52.5 6.0 59 2-60 219-278 (317)
154 cd06614 STKc_PAK Catalytic dom 98.6 2.1E-07 4.4E-12 51.6 5.8 57 2-58 211-269 (286)
155 cd06620 PKc_MAPKK_Byr1_like Ca 98.6 1.8E-07 4E-12 51.9 5.6 58 2-59 197-266 (284)
156 cd06655 STKc_PAK2 Catalytic do 98.6 2.4E-07 5.2E-12 51.9 6.1 58 1-58 209-268 (296)
157 cd06651 STKc_MEKK3 Catalytic d 98.6 9E-08 1.9E-12 52.6 4.3 56 2-58 204-260 (266)
158 cd06624 STKc_ASK Catalytic dom 98.6 1.5E-07 3.2E-12 51.8 5.0 57 2-58 206-264 (268)
159 cd05122 PKc_STE Catalytic doma 98.6 2.2E-07 4.8E-12 50.1 5.6 58 1-58 191-250 (253)
160 cd06627 STKc_Cdc7_like Catalyt 98.6 2.1E-07 4.5E-12 50.5 5.5 57 2-58 194-250 (254)
161 cd06648 STKc_PAK_II Catalytic 98.6 2.4E-07 5.1E-12 51.6 5.8 58 1-58 209-268 (285)
162 cd06608 STKc_myosinIII_like Ca 98.6 1.9E-07 4E-12 51.2 5.3 57 2-58 213-271 (275)
163 cd06618 PKc_MKK7 Catalytic dom 98.6 2.2E-07 4.7E-12 51.9 5.5 58 2-59 213-273 (296)
164 cd05037 PTK_Jak_rpt1 Pseudokin 98.6 2.2E-07 4.8E-12 50.6 5.4 56 3-60 203-258 (259)
165 cd05042 PTKc_Aatyk Catalytic d 98.6 5.2E-07 1.1E-11 49.6 6.8 57 3-60 206-267 (269)
166 cd05579 STKc_MAST_like Catalyt 98.6 1.7E-07 3.8E-12 51.0 4.7 59 1-60 195-255 (265)
167 KOG0201|consensus 98.6 4.3E-08 9.4E-13 57.8 2.2 58 2-59 206-263 (467)
168 cd06613 STKc_MAP4K3_like Catal 98.5 1.9E-07 4.2E-12 50.9 4.5 57 2-58 199-259 (262)
169 cd06654 STKc_PAK1 Catalytic do 98.5 4.5E-07 9.7E-12 50.8 6.0 58 1-58 210-269 (296)
170 cd06616 PKc_MKK4 Catalytic dom 98.5 2.2E-07 4.8E-12 51.5 4.8 58 2-59 205-267 (288)
171 cd06629 STKc_MAPKKK_Bck1_like 98.5 3.6E-07 7.8E-12 50.2 5.2 58 2-59 207-269 (272)
172 smart00220 S_TKc Serine/Threon 98.5 6.3E-07 1.4E-11 47.9 6.0 57 2-58 181-240 (244)
173 cd05570 STKc_PKC Catalytic dom 98.5 3.9E-07 8.5E-12 51.5 5.3 57 1-58 190-251 (318)
174 PTZ00263 protein kinase A cata 98.5 4E-07 8.8E-12 51.7 5.3 57 1-58 209-270 (329)
175 cd06646 STKc_MAP4K5 Catalytic 98.5 1E-07 2.2E-12 52.3 2.7 58 2-59 204-265 (267)
176 cd06656 STKc_PAK3 Catalytic do 98.5 1.5E-07 3.3E-12 52.6 3.5 57 2-58 210-268 (297)
177 cd05123 STKc_AGC Catalytic dom 98.5 4.3E-07 9.3E-12 49.2 5.1 53 2-55 188-240 (250)
178 cd07847 STKc_CDKL1_4 Catalytic 98.5 4.1E-07 8.9E-12 50.2 4.9 29 30-58 254-282 (286)
179 cd06606 STKc_MAPKKK Catalytic 98.5 5.3E-07 1.2E-11 48.7 5.3 57 2-58 198-256 (260)
180 cd05578 STKc_Yank1 Catalytic d 98.5 4.3E-07 9.4E-12 49.6 4.7 56 1-57 193-253 (258)
181 cd06647 STKc_PAK_I Catalytic d 98.5 2.3E-07 4.9E-12 51.9 3.5 58 2-59 210-269 (293)
182 cd05585 STKc_YPK1_like Catalyt 98.4 4E-07 8.7E-12 51.3 4.2 53 1-54 187-239 (312)
183 cd06658 STKc_PAK5 Catalytic do 98.4 1.1E-06 2.3E-11 49.2 5.8 59 1-59 212-272 (292)
184 cd05612 STKc_PRKX_like Catalyt 98.4 8.1E-07 1.7E-11 49.6 5.1 58 1-59 192-254 (291)
185 cd05581 STKc_PDK1 Catalytic do 98.4 7E-07 1.5E-11 49.1 4.8 56 2-58 217-276 (280)
186 cd05582 STKc_RSK_N N-terminal 98.4 1.4E-06 3.1E-11 49.2 6.1 53 1-54 192-244 (318)
187 cd05584 STKc_p70S6K Catalytic 98.4 1.3E-06 2.8E-11 49.5 5.7 57 1-58 194-255 (323)
188 cd06617 PKc_MKK3_6 Catalytic d 98.4 1.3E-06 2.9E-11 48.2 5.6 57 2-58 202-260 (283)
189 cd05611 STKc_Rim15_like Cataly 98.4 6.7E-07 1.5E-11 48.9 4.3 53 2-54 188-243 (260)
190 cd07831 STKc_MOK Catalytic dom 98.4 1E-06 2.3E-11 48.5 5.1 29 30-58 250-278 (282)
191 cd05589 STKc_PKN Catalytic dom 98.4 1.6E-06 3.5E-11 49.1 5.9 57 1-58 195-256 (324)
192 KOG4645|consensus 98.4 4.6E-07 1E-11 59.2 4.0 58 1-58 1435-1493(1509)
193 cd06621 PKc_MAPKK_Pek1_like Ca 98.4 2E-06 4.2E-11 47.9 6.1 57 2-58 198-265 (287)
194 cd07862 STKc_CDK6 Catalytic do 98.4 1.1E-06 2.3E-11 48.9 5.0 57 2-58 204-286 (290)
195 cd05571 STKc_PKB Catalytic dom 98.4 1.4E-06 3.1E-11 49.4 5.5 57 1-58 189-250 (323)
196 cd06633 STKc_TAO3 Catalytic do 98.4 2.1E-06 4.5E-11 48.5 6.1 57 2-58 215-272 (313)
197 cd05591 STKc_nPKC_epsilon Cata 98.4 1.8E-06 3.8E-11 48.9 5.4 57 1-58 190-253 (321)
198 cd05592 STKc_nPKC_theta_delta 98.3 1.8E-06 4E-11 48.8 5.4 55 1-56 190-245 (316)
199 KOG0588|consensus 98.3 1.8E-06 3.8E-11 53.6 5.5 58 1-59 206-263 (786)
200 cd06657 STKc_PAK4 Catalytic do 98.3 2.9E-06 6.3E-11 47.5 6.1 58 1-58 210-269 (292)
201 KOG0578|consensus 98.3 1.7E-06 3.8E-11 52.3 5.3 57 2-58 464-522 (550)
202 cd08227 PK_STRAD_alpha Pseudok 98.3 1.5E-06 3.3E-11 49.2 4.8 28 31-58 279-306 (327)
203 cd05590 STKc_nPKC_eta Catalyti 98.3 1.5E-06 3.2E-11 49.3 4.8 52 1-53 190-241 (320)
204 cd05118 STKc_CMGC Catalytic do 98.3 1.9E-06 4.1E-11 47.5 5.0 29 30-58 251-279 (283)
205 cd06659 STKc_PAK6 Catalytic do 98.3 4.1E-06 8.9E-11 47.0 6.3 58 2-59 212-271 (297)
206 cd06650 PKc_MEK1 Catalytic dom 98.3 2.8E-06 6.2E-11 48.4 5.6 29 30-58 270-298 (333)
207 cd05619 STKc_nPKC_theta Cataly 98.3 2.2E-06 4.8E-11 48.5 5.1 56 1-57 190-246 (316)
208 cd05605 STKc_GRK4_like Catalyt 98.3 1.2E-06 2.7E-11 48.7 3.9 57 1-58 195-260 (285)
209 KOG0575|consensus 98.3 2.8E-06 6.1E-11 51.8 5.5 57 2-59 213-269 (592)
210 cd05593 STKc_PKB_gamma Catalyt 98.3 2.3E-06 4.9E-11 48.7 4.8 58 1-59 189-251 (328)
211 cd05583 STKc_MSK_N N-terminal 98.3 2.7E-06 5.9E-11 47.2 4.9 60 2-62 203-266 (288)
212 cd05586 STKc_Sck1_like Catalyt 98.3 4.4E-06 9.5E-11 47.4 5.8 58 1-58 191-252 (330)
213 cd05620 STKc_nPKC_delta Cataly 98.3 3.5E-06 7.7E-11 47.7 5.3 55 2-57 191-246 (316)
214 cd05594 STKc_PKB_alpha Catalyt 98.3 3.3E-06 7.1E-11 47.9 5.1 57 1-58 190-251 (325)
215 cd07879 STKc_p38delta_MAPK13 C 98.3 4.2E-06 9E-11 47.8 5.5 30 30-59 268-297 (342)
216 cd07851 STKc_p38 Catalytic dom 98.2 3.6E-06 7.7E-11 48.1 5.1 29 30-58 269-297 (343)
217 cd07835 STKc_CDK1_like Catalyt 98.2 4.4E-06 9.5E-11 46.2 5.3 30 29-58 250-279 (283)
218 cd07848 STKc_CDKL5 Catalytic d 98.2 2.6E-06 5.6E-11 47.3 4.3 29 30-58 255-283 (287)
219 cd05607 STKc_GRK7 Catalytic do 98.2 2.1E-06 4.6E-11 47.6 3.9 57 1-57 188-248 (277)
220 cd07859 STKc_TDY_MAPK_plant Ca 98.2 3.8E-06 8.2E-11 47.5 4.9 29 30-58 261-289 (338)
221 cd06649 PKc_MEK2 Catalytic dom 98.2 5.6E-06 1.2E-10 47.1 5.6 45 15-59 256-301 (331)
222 cd07860 STKc_CDK2_3 Catalytic 98.2 4.5E-06 9.8E-11 46.2 5.0 29 30-58 252-280 (284)
223 cd05580 STKc_PKA Catalytic dom 98.2 5.5E-06 1.2E-10 46.1 5.4 57 1-58 192-253 (290)
224 cd05574 STKc_phototropin_like 98.2 6.2E-06 1.3E-10 46.4 5.5 58 1-58 226-288 (316)
225 cd07834 STKc_MAPK Catalytic do 98.2 8.6E-06 1.9E-10 46.1 6.1 30 30-59 260-289 (330)
226 cd05595 STKc_PKB_beta Catalyti 98.2 3.4E-06 7.3E-11 47.9 4.4 57 1-58 189-250 (323)
227 cd05600 STKc_Sid2p_Dbf2p Catal 98.2 7.3E-06 1.6E-10 46.6 5.7 59 1-59 192-257 (333)
228 cd07864 STKc_CDK12 Catalytic d 98.2 6E-06 1.3E-10 46.0 5.2 29 30-58 270-298 (302)
229 cd06645 STKc_MAP4K3 Catalytic 98.2 9.1E-06 2E-10 44.6 5.8 57 2-58 204-264 (267)
230 KOG0983|consensus 98.2 7.1E-06 1.5E-10 46.9 5.3 57 2-58 289-348 (391)
231 cd07837 STKc_CdkB_plant Cataly 98.2 8.2E-06 1.8E-10 45.4 5.6 29 30-58 262-290 (295)
232 cd08226 PK_STRAD_beta Pseudoki 98.2 6.2E-06 1.3E-10 46.8 5.2 29 30-58 279-307 (328)
233 KOG0591|consensus 98.2 9E-06 1.9E-10 46.5 5.7 53 4-56 225-278 (375)
234 cd06630 STKc_MEKK1 Catalytic d 98.2 8.7E-06 1.9E-10 44.6 5.6 57 2-58 203-263 (268)
235 cd07846 STKc_CDKL2_3 Catalytic 98.2 6.8E-06 1.5E-10 45.4 5.1 30 29-58 253-282 (286)
236 cd05587 STKc_cPKC Catalytic do 98.2 4.6E-06 1E-10 47.3 4.5 52 1-53 195-246 (324)
237 PTZ00426 cAMP-dependent protei 98.2 8.3E-06 1.8E-10 46.8 5.5 58 1-59 222-284 (340)
238 cd05630 STKc_GRK6 Catalytic do 98.2 3.3E-06 7.1E-11 47.1 3.7 58 1-58 195-260 (285)
239 cd05632 STKc_GRK5 Catalytic do 98.2 8.2E-06 1.8E-10 45.5 5.2 57 1-58 195-260 (285)
240 cd05601 STKc_CRIK Catalytic do 98.2 1.1E-05 2.4E-10 45.8 5.8 57 1-58 203-262 (330)
241 cd06619 PKc_MKK5 Catalytic dom 98.1 7.7E-06 1.7E-10 45.3 5.0 58 2-59 188-253 (279)
242 cd07861 STKc_CDK1_euk Catalyti 98.1 9.4E-06 2E-10 44.9 5.3 30 29-58 252-281 (285)
243 cd06615 PKc_MEK Catalytic doma 98.1 7.1E-06 1.5E-10 46.2 4.7 30 30-59 258-287 (308)
244 cd07830 STKc_MAK_like Catalyti 98.1 1.6E-05 3.5E-10 43.9 6.0 27 32-58 253-279 (283)
245 cd08216 PK_STRAD Pseudokinase 98.1 1.8E-05 4E-10 44.4 6.1 27 32-58 268-294 (314)
246 cd07840 STKc_CDK9_like Catalyt 98.1 1.3E-05 2.8E-10 44.2 5.4 28 31-58 256-283 (287)
247 KOG0582|consensus 98.1 1.3E-05 2.9E-10 48.0 5.6 57 2-58 227-292 (516)
248 cd05573 STKc_ROCK_NDR_like Cat 98.1 1.5E-05 3.2E-10 45.4 5.7 58 1-59 224-285 (350)
249 KOG1023|consensus 98.1 1.2E-05 2.7E-10 48.5 5.5 63 3-65 154-226 (484)
250 cd06652 STKc_MEKK2 Catalytic d 98.1 1.2E-05 2.6E-10 44.1 5.2 56 2-58 204-260 (265)
251 cd07841 STKc_CDK7 Catalytic do 98.1 1.3E-05 2.8E-10 44.7 5.4 29 30-58 253-281 (298)
252 cd07849 STKc_ERK1_2_like Catal 98.1 7E-06 1.5E-10 46.7 4.3 30 30-59 263-292 (336)
253 cd07854 STKc_MAPK4_6 Catalytic 98.1 1.9E-05 4E-10 45.2 6.0 29 30-58 271-299 (342)
254 cd07852 STKc_MAPK15 Catalytic 98.1 1.7E-05 3.6E-10 45.2 5.7 30 30-59 266-295 (337)
255 cd07845 STKc_CDK10 Catalytic d 98.1 1.1E-05 2.3E-10 45.4 4.9 29 31-59 262-290 (309)
256 PTZ00036 glycogen synthase kin 98.1 9.2E-06 2E-10 48.2 4.8 31 28-58 320-350 (440)
257 cd07872 STKc_PCTAIRE2 Catalyti 98.1 9.4E-06 2E-10 45.6 4.7 29 30-58 257-285 (309)
258 cd05631 STKc_GRK4 Catalytic do 98.1 7E-06 1.5E-10 45.7 4.1 56 2-58 196-260 (285)
259 cd07832 STKc_CCRK Catalytic do 98.1 1.5E-05 3.2E-10 44.0 5.3 30 30-59 253-282 (286)
260 PTZ00266 NIMA-related protein 98.1 1.2E-05 2.7E-10 52.0 5.3 56 2-58 238-294 (1021)
261 cd07873 STKc_PCTAIRE1 Catalyti 98.1 1.7E-05 3.6E-10 44.4 5.3 29 30-58 257-285 (301)
262 cd07843 STKc_CDC2L1 Catalytic 98.1 1.6E-05 3.6E-10 44.2 5.2 28 31-58 262-289 (293)
263 cd06653 STKc_MEKK3_like_1 Cata 98.1 2.2E-05 4.7E-10 43.2 5.5 56 2-58 204-260 (264)
264 cd07836 STKc_Pho85 Catalytic d 98.0 1.3E-05 2.9E-10 44.3 4.7 29 30-58 252-280 (284)
265 cd05616 STKc_cPKC_beta Catalyt 98.0 2E-05 4.4E-10 44.7 5.3 52 1-53 195-246 (323)
266 PTZ00024 cyclin-dependent prot 98.0 2.3E-05 5E-10 44.5 5.5 29 30-58 284-312 (335)
267 cd05575 STKc_SGK Catalytic dom 98.0 2.2E-05 4.7E-10 44.6 5.4 53 1-54 190-242 (323)
268 cd07858 STKc_TEY_MAPK_plant Ca 98.0 1.5E-05 3.3E-10 45.4 4.7 31 29-59 261-291 (337)
269 cd05633 STKc_GRK3 Catalytic do 98.0 1.1E-05 2.4E-10 44.9 3.9 57 2-58 191-254 (279)
270 KOG0583|consensus 98.0 4.6E-05 1E-09 44.7 6.4 56 1-57 217-273 (370)
271 KOG0584|consensus 98.0 1.3E-05 2.8E-10 49.3 4.2 56 2-58 238-295 (632)
272 cd05577 STKc_GRK Catalytic dom 98.0 2.4E-05 5.2E-10 43.3 5.0 53 2-55 189-245 (277)
273 cd07839 STKc_CDK5 Catalytic do 98.0 2E-05 4.3E-10 43.6 4.5 29 30-58 252-280 (284)
274 cd05614 STKc_MSK2_N N-terminal 98.0 3.5E-05 7.5E-10 43.8 5.5 57 1-58 201-266 (332)
275 cd07853 STKc_NLK Catalytic dom 98.0 4.5E-05 9.7E-10 44.1 6.0 30 29-58 258-287 (372)
276 cd07838 STKc_CDK4_6_like Catal 98.0 2.6E-05 5.5E-10 43.1 4.8 28 31-58 256-283 (287)
277 cd05610 STKc_MASTL Catalytic d 98.0 2.1E-05 4.6E-10 48.9 4.9 58 2-59 575-634 (669)
278 cd07829 STKc_CDK_like Catalyti 98.0 3.2E-05 7E-10 42.6 5.1 28 31-58 251-278 (282)
279 cd07871 STKc_PCTAIRE3 Catalyti 97.9 4E-05 8.6E-10 42.8 5.3 29 30-58 256-284 (288)
280 cd07855 STKc_ERK5 Catalytic do 97.9 4.3E-05 9.2E-10 43.5 5.4 29 30-58 265-293 (334)
281 cd05602 STKc_SGK1 Catalytic do 97.9 2.1E-05 4.6E-10 44.6 4.1 54 1-55 190-243 (325)
282 cd05615 STKc_cPKC_alpha Cataly 97.9 3.8E-05 8.1E-10 43.7 5.0 52 1-53 195-246 (323)
283 cd05588 STKc_aPKC Catalytic do 97.9 2.7E-05 5.9E-10 44.3 4.4 57 1-58 190-261 (329)
284 PHA03390 pk1 serine/threonine- 97.9 2E-05 4.3E-10 43.6 3.6 57 2-58 201-261 (267)
285 KOG4279|consensus 97.9 1.9E-05 4.1E-10 50.0 3.8 57 2-58 773-831 (1226)
286 cd05618 STKc_aPKC_iota Catalyt 97.9 3.9E-05 8.4E-10 43.8 4.8 52 1-53 190-250 (329)
287 cd07866 STKc_BUR1 Catalytic do 97.9 6.5E-05 1.4E-09 42.0 5.2 28 31-58 280-307 (311)
288 cd05617 STKc_aPKC_zeta Catalyt 97.9 4.6E-05 1E-09 43.4 4.6 53 1-53 190-248 (327)
289 PLN00009 cyclin-dependent kina 97.8 8.3E-05 1.8E-09 41.4 5.5 29 30-58 255-283 (294)
290 cd07875 STKc_JNK1 Catalytic do 97.8 3.9E-05 8.4E-10 44.2 4.2 28 32-59 291-318 (364)
291 cd07850 STKc_JNK Catalytic dom 97.8 7E-05 1.5E-09 43.0 5.1 28 31-58 283-310 (353)
292 cd05604 STKc_SGK3 Catalytic do 97.8 4.1E-05 8.8E-10 43.5 4.2 53 1-54 190-242 (325)
293 cd07833 STKc_CDKL Catalytic do 97.8 2E-05 4.4E-10 43.6 2.9 29 30-58 256-284 (288)
294 cd07876 STKc_JNK2 Catalytic do 97.8 8.3E-05 1.8E-09 42.8 5.2 29 31-59 287-315 (359)
295 KOG0589|consensus 97.8 0.00015 3.4E-09 43.3 6.1 56 4-59 203-258 (426)
296 cd05606 STKc_beta_ARK Catalyti 97.8 9.5E-05 2.1E-09 41.1 5.1 56 2-58 191-254 (278)
297 cd07856 STKc_Sty1_Hog1 Catalyt 97.8 0.0001 2.2E-09 42.0 5.3 30 30-59 259-288 (328)
298 KOG0580|consensus 97.8 0.00013 2.8E-09 40.9 5.4 57 2-59 217-273 (281)
299 KOG0615|consensus 97.8 4.4E-05 9.5E-10 45.4 3.8 59 1-59 375-437 (475)
300 cd07874 STKc_JNK3 Catalytic do 97.8 7.2E-05 1.6E-09 42.9 4.6 29 31-59 283-311 (355)
301 cd05608 STKc_GRK1 Catalytic do 97.8 5.7E-05 1.2E-09 42.0 4.1 57 1-58 191-256 (280)
302 cd05603 STKc_SGK2 Catalytic do 97.8 0.00013 2.9E-09 41.3 5.5 53 1-54 190-242 (321)
303 PLN00113 leucine-rich repeat r 97.8 4.1E-05 8.9E-10 49.0 3.7 32 34-65 922-953 (968)
304 KOG1989|consensus 97.8 3.8E-05 8.2E-10 48.4 3.5 60 3-66 254-314 (738)
305 cd07865 STKc_CDK9 Catalytic do 97.7 9.9E-05 2.2E-09 41.2 4.8 27 32-58 280-306 (310)
306 KOG0592|consensus 97.7 0.00015 3.2E-09 44.5 5.6 57 2-59 282-338 (604)
307 cd07863 STKc_CDK4 Catalytic do 97.7 0.00013 2.8E-09 40.5 5.1 29 30-58 256-284 (288)
308 cd07857 STKc_MPK1 Catalytic do 97.7 0.00022 4.8E-09 40.6 5.8 29 30-58 263-291 (332)
309 cd05613 STKc_MSK1_N N-terminal 97.7 0.00017 3.7E-09 40.1 5.3 57 1-58 202-267 (290)
310 PF00069 Pkinase: Protein kina 97.7 5.8E-06 1.3E-10 45.0 -0.5 57 2-58 194-256 (260)
311 cd07878 STKc_p38beta_MAPK11 Ca 97.7 8E-05 1.7E-09 42.5 3.9 29 31-59 270-298 (343)
312 KOG0033|consensus 97.7 0.00017 3.8E-09 40.9 5.0 57 2-58 207-266 (355)
313 KOG0579|consensus 97.6 0.00022 4.7E-09 45.2 5.3 57 3-59 231-289 (1187)
314 PTZ00284 protein kinase; Provi 97.6 0.00012 2.7E-09 43.6 4.0 26 33-58 412-437 (467)
315 cd05596 STKc_ROCK Catalytic do 97.6 0.00032 7E-09 40.7 5.6 59 1-59 241-304 (370)
316 cd07877 STKc_p38alpha_MAPK14 C 97.6 0.0001 2.2E-09 42.3 3.2 30 30-59 271-300 (345)
317 KOG0596|consensus 97.6 9.4E-05 2E-09 45.6 3.1 56 3-58 568-626 (677)
318 KOG1006|consensus 97.6 0.00033 7.2E-09 40.1 5.0 57 2-58 264-326 (361)
319 KOG2052|consensus 97.5 0.00027 5.9E-09 42.6 4.6 62 4-65 433-505 (513)
320 cd07869 STKc_PFTAIRE1 Catalyti 97.4 0.0003 6.4E-09 39.5 4.0 28 31-58 260-287 (303)
321 cd07880 STKc_p38gamma_MAPK12 C 97.4 0.00045 9.7E-09 39.6 4.7 30 29-58 268-297 (343)
322 KOG2345|consensus 97.4 8.3E-05 1.8E-09 41.9 1.5 35 30-64 267-301 (302)
323 KOG0598|consensus 97.4 0.00047 1E-08 40.3 4.5 57 1-57 219-279 (357)
324 PRK13184 pknD serine/threonine 97.3 0.0008 1.7E-08 43.7 5.3 64 2-65 226-292 (932)
325 KOG4717|consensus 97.3 0.00047 1E-08 42.8 3.9 56 2-58 214-269 (864)
326 cd07870 STKc_PFTAIRE2 Catalyti 97.3 0.00085 1.9E-08 37.4 4.6 27 32-58 261-287 (291)
327 PHA03209 serine/threonine kina 97.3 0.00023 5E-09 41.1 2.4 30 30-59 322-351 (357)
328 cd05626 STKc_LATS2 Catalytic d 97.2 0.0019 4.1E-08 37.7 5.8 59 1-59 242-305 (381)
329 cd07844 STKc_PCTAIRE_like Cata 97.2 0.0016 3.5E-08 36.2 5.2 26 33-58 262-287 (291)
330 cd05599 STKc_NDR_like Catalyti 97.2 0.002 4.4E-08 37.1 5.5 57 1-58 233-295 (364)
331 KOG0577|consensus 97.2 0.0017 3.7E-08 41.0 5.3 56 3-58 221-277 (948)
332 KOG0603|consensus 97.2 0.00061 1.3E-08 42.3 3.4 56 1-59 507-563 (612)
333 KOG0574|consensus 97.1 0.00013 2.9E-09 42.4 0.2 56 3-58 225-282 (502)
334 cd07842 STKc_CDK8_like Catalyt 97.1 0.00079 1.7E-08 37.8 3.2 29 30-58 284-312 (316)
335 cd05623 STKc_MRCK_alpha Cataly 97.0 0.0042 9.2E-08 35.5 5.6 59 1-59 202-266 (332)
336 cd05576 STKc_RPK118_like Catal 96.9 0.00066 1.4E-08 36.9 1.9 27 27-53 197-223 (237)
337 cd05628 STKc_NDR1 Catalytic do 96.9 0.0049 1.1E-07 35.7 5.5 59 1-59 230-293 (363)
338 KOG0032|consensus 96.9 0.0077 1.7E-07 35.8 6.3 59 1-59 232-293 (382)
339 KOG0694|consensus 96.9 0.004 8.7E-08 39.3 5.2 52 1-53 562-613 (694)
340 cd05598 STKc_LATS Catalytic do 96.9 0.0036 7.8E-08 36.3 4.8 57 1-58 238-300 (376)
341 PHA03211 serine/threonine kina 96.9 0.001 2.2E-08 40.1 2.5 29 31-59 427-455 (461)
342 KOG0593|consensus 96.8 0.0056 1.2E-07 35.8 5.2 29 30-58 255-283 (396)
343 KOG0587|consensus 96.8 0.0011 2.4E-08 42.8 2.4 57 2-58 223-281 (953)
344 cd05621 STKc_ROCK2 Catalytic d 96.8 0.0081 1.8E-07 35.1 5.7 59 1-59 241-304 (370)
345 cd05622 STKc_ROCK1 Catalytic d 96.8 0.008 1.7E-07 35.1 5.6 59 1-59 241-304 (371)
346 PHA03212 serine/threonine kina 96.7 0.0012 2.6E-08 38.9 2.1 28 31-58 348-375 (391)
347 KOG0614|consensus 96.7 0.0025 5.4E-08 39.6 3.3 52 1-52 613-665 (732)
348 cd07868 STKc_CDK8 Catalytic do 96.7 0.0023 4.9E-08 36.1 2.9 27 32-58 287-313 (317)
349 cd07867 STKc_CDC2L6 Catalytic 96.7 0.002 4.3E-08 36.3 2.6 27 32-58 287-313 (317)
350 cd05624 STKc_MRCK_beta Catalyt 96.7 0.0087 1.9E-07 34.3 5.2 58 1-58 202-265 (331)
351 KOG0599|consensus 96.6 0.003 6.5E-08 36.6 3.0 58 2-59 223-283 (411)
352 cd05627 STKc_NDR2 Catalytic do 96.6 0.012 2.6E-07 34.1 5.5 57 1-58 230-292 (360)
353 KOG0616|consensus 96.6 0.0057 1.2E-07 35.6 3.9 48 2-50 236-283 (355)
354 cd00180 PKc Catalytic domain o 96.6 0.0025 5.4E-08 33.1 2.4 27 33-59 188-214 (215)
355 PHA03207 serine/threonine kina 96.5 0.0026 5.7E-08 37.3 2.6 29 31-59 347-375 (392)
356 PLN00181 protein SPA1-RELATED; 96.5 0.0036 7.7E-08 39.9 3.3 27 32-58 238-264 (793)
357 cd05597 STKc_DMPK_like Catalyt 96.5 0.02 4.3E-07 32.8 5.9 59 1-59 202-266 (331)
358 cd05629 STKc_NDR_like_fungal C 96.5 0.014 3E-07 34.0 5.3 58 1-59 242-305 (377)
359 KOG0611|consensus 96.3 0.017 3.6E-07 35.3 5.1 55 3-59 249-303 (668)
360 cd05625 STKc_LATS1 Catalytic d 96.2 0.017 3.8E-07 33.6 4.8 57 1-58 242-304 (382)
361 KOG0610|consensus 96.2 0.014 3.1E-07 35.2 4.2 56 2-57 330-390 (459)
362 KOG0661|consensus 96.0 0.0083 1.8E-07 36.8 2.9 30 30-59 262-291 (538)
363 KOG3653|consensus 96.0 0.018 3.8E-07 35.4 4.1 61 4-64 433-504 (534)
364 KOG0690|consensus 95.8 0.019 4.2E-07 34.1 3.6 50 1-51 362-411 (516)
365 KOG0585|consensus 95.5 0.034 7.3E-07 34.4 3.9 56 3-59 315-372 (576)
366 KOG1187|consensus 95.5 0.04 8.6E-07 32.5 4.1 30 35-64 324-353 (361)
367 PHA03210 serine/threonine kina 95.3 0.027 5.8E-07 34.4 3.3 28 31-58 426-453 (501)
368 PLN03225 Serine/threonine-prot 94.9 0.027 5.8E-07 35.0 2.4 26 34-59 425-450 (566)
369 KOG0586|consensus 94.7 0.03 6.4E-07 35.1 2.3 56 2-59 250-306 (596)
370 KOG0597|consensus 94.6 0.07 1.5E-06 34.0 3.6 57 1-58 194-250 (808)
371 KOG0605|consensus 94.5 0.096 2.1E-06 32.6 4.0 55 2-57 383-443 (550)
372 KOG0696|consensus 94.4 0.19 4.1E-06 31.1 5.1 49 1-50 544-592 (683)
373 KOG1027|consensus 93.4 0.11 2.4E-06 34.0 3.0 52 3-58 711-766 (903)
374 KOG0576|consensus 93.3 0.34 7.4E-06 31.5 4.9 55 4-58 212-270 (829)
375 KOG0604|consensus 93.1 0.17 3.7E-06 30.0 3.1 57 2-58 258-321 (400)
376 KOG0595|consensus 92.7 0.31 6.7E-06 29.6 4.0 56 2-57 209-266 (429)
377 KOG1035|consensus 92.4 0.54 1.2E-05 32.4 5.0 45 14-58 823-870 (1351)
378 KOG4158|consensus 91.7 0.55 1.2E-05 29.1 4.2 38 24-61 475-512 (598)
379 KOG0660|consensus 91.6 0.93 2E-05 27.1 5.0 30 29-58 280-309 (359)
380 KOG0671|consensus 89.6 0.34 7.4E-06 29.3 2.1 26 33-58 380-405 (415)
381 KOG0659|consensus 89.0 0.53 1.1E-05 27.4 2.5 31 29-59 251-281 (318)
382 KOG1151|consensus 88.5 1.1 2.4E-05 28.2 3.8 54 3-57 680-739 (775)
383 KOG1165|consensus 87.7 4.6 9.9E-05 24.7 6.0 64 2-65 231-301 (449)
384 KOG0606|consensus 86.5 1.4 3E-05 30.2 3.5 50 2-51 253-304 (1205)
385 KOG0667|consensus 83.0 1.2 2.6E-05 28.4 2.1 26 33-58 476-501 (586)
386 KOG0658|consensus 81.9 2.2 4.8E-05 25.7 2.8 30 29-58 276-305 (364)
387 KOG1167|consensus 80.9 2 4.3E-05 26.3 2.4 30 29-58 351-380 (418)
388 KOG1163|consensus 78.6 11 0.00024 22.2 6.4 63 3-65 217-286 (341)
389 PF09164 VitD-bind_III: Vitami 74.1 1.3 2.8E-05 20.1 0.3 34 7-40 6-39 (68)
390 KOG0590|consensus 69.5 6.4 0.00014 25.3 2.7 30 29-58 555-584 (601)
391 PF08247 ENOD40: ENOD40 protei 69.1 0.52 1.1E-05 14.1 -1.1 7 40-46 2-8 (12)
392 PLN03224 probable serine/threo 68.1 7.8 0.00017 24.4 2.8 31 29-59 467-500 (507)
393 cd07439 FANCE_c-term Fanconi a 65.7 1.8 3.9E-05 24.8 -0.2 38 31-68 210-248 (254)
394 KOG0669|consensus 65.7 12 0.00025 22.2 3.0 29 31-59 287-315 (376)
395 PF05617 Prolamin_like: Prolam 65.4 7.7 0.00017 17.3 1.9 43 13-55 14-59 (70)
396 KOG1164|consensus 64.0 26 0.00057 20.3 5.8 65 2-66 232-300 (322)
397 KOG1266|consensus 62.5 0.9 1.9E-05 27.5 -1.8 24 36-59 308-331 (458)
398 PF14756 Pdase_C33_assoc: Pept 59.3 23 0.0005 18.1 4.3 33 34-66 77-110 (147)
399 KOG1290|consensus 58.3 11 0.00024 24.1 2.2 27 32-58 523-549 (590)
400 KOG0600|consensus 56.1 20 0.00043 23.1 3.0 29 30-58 371-399 (560)
401 KOG0594|consensus 51.7 16 0.00034 21.9 2.0 27 33-59 276-302 (323)
402 TIGR03643 conserved hypothetic 51.7 26 0.00055 16.3 2.5 20 36-59 3-22 (72)
403 PF13220 DUF4028: Protein of u 51.4 11 0.00023 16.5 1.0 16 45-60 36-51 (65)
404 PF09049 SNN_transmemb: Stanni 50.2 17 0.00037 13.8 1.5 9 35-43 25-33 (33)
405 KOG0670|consensus 49.8 17 0.00036 23.8 2.0 25 34-58 721-745 (752)
406 cd05501 Bromo_SP100C_like Brom 49.7 33 0.00071 16.9 3.4 51 13-66 44-94 (102)
407 PF02173 pKID: pKID domain; I 49.6 20 0.00043 14.7 1.6 15 48-62 17-31 (41)
408 smart00221 STYKc Protein kinas 49.3 18 0.0004 18.9 2.0 25 2-26 195-221 (225)
409 PRK10721 hypothetical protein; 49.0 22 0.00048 16.2 1.9 20 27-46 45-64 (66)
410 PF04468 PSP1: PSP1 C-terminal 48.8 23 0.00049 16.8 2.0 23 44-66 59-81 (88)
411 PF08403 AA_permease_N: Amino 48.6 24 0.00053 16.4 2.0 21 42-62 32-52 (74)
412 PF14531 Kinase-like: Kinase-l 46.2 16 0.00034 21.5 1.5 21 30-50 268-288 (288)
413 PF12533 Neuro_bHLH: Neuronal 45.6 14 0.0003 18.9 1.1 27 14-48 8-34 (120)
414 PF09905 DUF2132: Uncharacteri 44.6 33 0.00072 15.5 2.6 38 4-48 3-41 (64)
415 cd05496 Bromo_WDR9_II Bromodom 43.3 46 0.00099 16.8 3.7 52 13-65 49-100 (119)
416 COG2046 MET3 ATP sulfurylase ( 43.2 79 0.0017 19.7 4.0 38 11-49 346-383 (397)
417 COG4063 MtrA Tetrahydromethano 42.9 60 0.0013 18.3 3.2 46 2-47 108-155 (238)
418 PF08499 PDEase_I_N: 3'5'-cycl 42.8 34 0.00075 15.2 3.4 34 28-61 14-52 (59)
419 KOG0612|consensus 42.6 67 0.0014 23.2 4.0 57 2-58 276-337 (1317)
420 PF08769 Spo0A_C: Sporulation 42.1 46 0.00099 16.5 3.9 32 32-63 58-104 (106)
421 KOG1033|consensus 42.0 57 0.0012 21.0 3.4 36 19-55 472-508 (516)
422 PF08059 SEP: SEP domain; Int 42.0 24 0.00052 16.3 1.5 21 6-26 17-37 (75)
423 PRK12482 flagellar motor prote 42.0 37 0.0008 20.0 2.5 22 44-65 264-285 (287)
424 PF12588 PSDC: Phophatidylseri 41.7 55 0.0012 17.2 4.6 35 32-66 15-58 (141)
425 TIGR03412 iscX_yfhJ FeS assemb 41.4 33 0.00072 15.5 1.8 19 27-45 42-60 (63)
426 PF03677 UPF0137: Uncharacteri 40.4 37 0.0008 19.5 2.3 54 7-60 169-239 (243)
427 PF04433 SWIRM: SWIRM domain; 40.3 24 0.00053 16.4 1.4 28 34-61 37-64 (86)
428 COG1157 FliI Flagellar biosynt 40.3 78 0.0017 20.0 3.7 32 34-65 409-440 (441)
429 KOG4236|consensus 39.4 33 0.00072 22.7 2.2 55 1-57 760-817 (888)
430 KOG0044|consensus 39.0 71 0.0015 17.7 4.0 40 27-66 57-96 (193)
431 PF10985 DUF2805: Protein of u 38.9 46 0.00099 15.5 2.3 19 37-59 3-21 (73)
432 PF00486 Trans_reg_C: Transcri 38.6 40 0.00087 14.8 2.8 31 36-66 28-59 (77)
433 cd05491 Bromo_TBP7_like Bromod 37.8 17 0.00038 18.5 0.7 42 7-49 62-103 (119)
434 PF08542 Rep_fac_C: Replicatio 37.7 47 0.001 15.3 3.3 28 33-66 6-33 (89)
435 PF07010 Endomucin: Endomucin; 37.6 35 0.00075 19.6 1.9 14 35-48 207-220 (259)
436 COG3299 XkdT Uncharacterized h 37.0 59 0.0013 19.9 2.9 20 47-66 1-20 (353)
437 PF15331 TP53IP5: Cellular tum 36.8 26 0.00056 19.8 1.3 12 33-44 34-45 (220)
438 PF01972 SDH_sah: Serine dehyd 36.6 41 0.00088 19.9 2.1 30 25-55 241-270 (285)
439 cd06399 PB1_P40 The PB1 domain 36.4 57 0.0012 15.9 2.3 24 42-65 19-42 (92)
440 PF12090 Spt20: Spt20 family; 36.1 77 0.0017 17.3 3.2 31 3-41 35-65 (182)
441 KOG0695|consensus 36.0 75 0.0016 19.8 3.2 49 1-51 445-502 (593)
442 PF02755 RPEL: RPEL repeat; I 35.6 31 0.00067 12.6 1.2 10 49-58 9-18 (26)
443 PF04384 Fe-S_assembly: Iron-s 35.1 41 0.00088 15.3 1.6 32 13-44 28-60 (64)
444 PF14611 SLS: Mitochondrial in 34.8 34 0.00075 18.7 1.6 17 35-51 6-22 (210)
445 PF07763 FEZ: FEZ-like protein 33.8 80 0.0017 18.3 2.9 32 34-67 99-130 (244)
446 KOG4138|consensus 33.1 33 0.00072 16.6 1.2 20 37-56 68-87 (96)
447 COG4628 Uncharacterized conser 33.1 48 0.001 16.9 1.8 44 4-54 12-56 (136)
448 cd00059 FH Forkhead (FH), also 33.0 60 0.0013 15.1 3.0 27 36-62 7-33 (78)
449 smart00862 Trans_reg_C Transcr 32.8 52 0.0011 14.4 3.5 30 36-65 28-59 (78)
450 KOG0606|consensus 32.6 82 0.0018 22.6 3.2 53 2-54 1030-1084(1205)
451 PF04458 DUF505: Protein of un 32.4 1.4E+02 0.0031 19.7 4.1 47 14-60 267-320 (591)
452 KOG0668|consensus 31.5 51 0.0011 19.4 2.0 28 31-58 294-321 (338)
453 COG3327 PaaX Phenylacetic acid 31.3 27 0.00059 20.4 0.9 16 33-48 165-180 (291)
454 KOG3046|consensus 30.2 94 0.002 16.5 3.0 39 13-57 74-112 (147)
455 smart00707 RPEL Repeat in Dros 29.4 42 0.00092 12.3 1.2 11 48-58 8-18 (26)
456 KOG0663|consensus 29.0 66 0.0014 20.0 2.2 28 31-58 333-360 (419)
457 TIGR01527 arch_NMN_Atrans nico 28.5 1E+02 0.0023 16.5 3.9 33 7-41 121-153 (165)
458 smart00339 FH FORKHEAD. FORKHE 28.3 79 0.0017 15.1 3.0 26 36-61 7-32 (89)
459 PF11852 DUF3372: Domain of un 28.2 1.1E+02 0.0024 16.7 3.7 29 34-63 19-47 (168)
460 cd05509 Bromo_gcn5_like Bromod 27.7 82 0.0018 15.0 3.6 54 11-66 43-96 (101)
461 PF10792 DUF2605: Protein of u 27.0 44 0.00095 16.5 1.1 14 34-47 80-93 (98)
462 KOG0666|consensus 26.9 63 0.0014 20.0 1.9 27 32-58 310-336 (438)
463 KOG0986|consensus 26.8 1E+02 0.0023 20.0 2.8 50 3-53 382-435 (591)
464 cd05510 Bromo_SPT7_like Bromod 26.4 97 0.0021 15.4 3.4 53 11-64 50-102 (112)
465 COG3084 Uncharacterized protei 26.1 71 0.0015 15.0 1.6 16 33-48 7-22 (88)
466 PF10742 DUF2555: Protein of u 25.8 53 0.0012 14.5 1.1 17 3-19 26-42 (57)
467 KOG4695|consensus 25.7 1.1E+02 0.0023 15.6 3.7 55 5-60 21-77 (122)
468 PF02918 Pertussis_S2S3: Pertu 25.5 1E+02 0.0022 15.5 2.3 23 45-67 49-71 (109)
469 COG5117 NOC3 Protein involved 25.5 2E+02 0.0044 18.8 3.8 36 30-66 266-301 (657)
470 smart00553 SEP Domain present 25.0 98 0.0021 15.0 2.2 20 6-25 23-42 (93)
471 cd05502 Bromo_tif1_like Bromod 25.0 1E+02 0.0022 15.1 3.5 54 11-65 45-100 (109)
472 KOG0025|consensus 24.9 71 0.0015 19.4 1.8 17 47-63 192-208 (354)
473 PF09039 HTH_Tnp_Mu_2: Mu DNA 24.8 1.1E+02 0.0023 15.3 3.9 35 29-65 29-63 (108)
474 PF00250 Fork_head: Fork head 24.5 1E+02 0.0022 14.9 2.2 28 35-62 6-33 (96)
475 PF02375 JmjN: jmjN domain; I 24.5 62 0.0013 12.6 1.4 15 49-63 3-17 (34)
476 PF15112 DUF4559: Domain of un 24.3 1.7E+02 0.0038 17.7 4.2 55 12-66 98-155 (307)
477 PF05166 YcgL: YcgL domain; I 24.1 46 0.00099 15.5 0.8 25 4-28 47-72 (74)
478 smart00544 MA3 Domain in DAP-5 24.1 69 0.0015 15.4 1.5 46 13-61 19-64 (113)
479 KOG0665|consensus 23.9 98 0.0021 19.1 2.3 27 32-58 283-309 (369)
480 TIGR01620 hyp_HI0043 conserved 23.4 1.5E+02 0.0032 17.7 2.9 24 38-61 260-285 (289)
481 cd01324 cbb3_Oxidase_CcoQ Cyto 22.5 41 0.00089 14.1 0.5 16 42-57 28-43 (48)
482 cd05516 Bromo_SNF2L2 Bromodoma 22.4 1.2E+02 0.0025 14.9 2.7 54 11-66 49-102 (107)
483 PF11112 PyocinActivator: Pyoc 22.3 1E+02 0.0022 14.3 2.4 18 7-24 25-42 (76)
484 COG0796 MurI Glutamate racemas 22.2 1.3E+02 0.0029 17.7 2.6 18 2-19 39-56 (269)
485 PF03607 DCX: Doublecortin; I 21.8 91 0.002 13.5 1.8 17 46-62 4-20 (60)
486 TIGR00067 glut_race glutamate 21.7 1.4E+02 0.003 17.1 2.6 18 2-19 32-49 (251)
487 TIGR01589 A_thal_3526 uncharac 21.7 62 0.0013 14.3 1.0 14 35-48 4-17 (57)
488 TIGR00269 conserved hypothetic 21.5 1.2E+02 0.0026 14.8 5.3 53 4-57 4-64 (104)
489 PF13797 Post_transc_reg: Post 21.3 1.2E+02 0.0025 14.5 2.8 34 28-63 26-60 (87)
490 PF12321 DUF3634: Protein of u 21.3 40 0.00086 17.0 0.4 23 22-44 71-93 (108)
491 cd00383 trans_reg_C Effector d 21.1 1.1E+02 0.0023 14.0 3.6 30 36-65 46-76 (95)
492 cd02165 NMNAT Nicotinamide/nic 20.9 1.6E+02 0.0034 15.9 4.0 33 6-40 155-187 (192)
493 KOG1090|consensus 20.7 3.6E+02 0.0077 19.9 4.7 23 33-55 1222-1244(1732)
494 PF09713 A_thal_3526: Plant pr 20.5 27 0.00058 15.3 -0.3 12 36-47 2-13 (54)
495 PF12976 DUF3860: Domain of Un 20.3 1.2E+02 0.0026 14.4 2.7 25 14-41 23-47 (92)
496 cd08784 Death_DRs Death Domain 20.0 1.2E+02 0.0025 14.0 2.0 28 37-64 43-70 (79)
No 1
>KOG0197|consensus
Probab=99.85 E-value=1.1e-20 Score=110.18 Aligned_cols=65 Identities=35% Similarity=0.709 Sum_probs=62.2
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
|..||+++++.++++.|.+|+|++.|..||.++|++|..||+.+|.+||||..+...+..+....
T Consensus 401 G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 401 GRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred CCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 89999999999999999999999999999999999999999999999999999999999887654
No 2
>KOG1026|consensus
Probab=99.77 E-value=1.4e-18 Score=105.67 Aligned_cols=65 Identities=25% Similarity=0.582 Sum_probs=61.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
|..||.+++++||++.|++|.-++.|.+||.++|.||..||+.+|.+||+|++|...|..+.+.+
T Consensus 702 G~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 702 GKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred ccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999999999999999999999999887643
No 3
>KOG4257|consensus
Probab=99.72 E-value=3.7e-18 Score=102.82 Aligned_cols=65 Identities=29% Similarity=0.625 Sum_probs=61.7
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
-|..||.|..+.+|+..+.+|.|++.|++||+.+|.||.+||.++|.+||.|.+|...|..+++.
T Consensus 588 lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 588 LGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred hcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999988763
No 4
>KOG0196|consensus
Probab=99.72 E-value=2.3e-17 Score=100.82 Aligned_cols=66 Identities=30% Similarity=0.588 Sum_probs=62.5
Q ss_pred CC-cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 1 MN-RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 1 ~~-g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|+ |+-||=++++++|+..|..|+|+|.|-+||..+++||..||+.+...||.|.+|+..|++++-+
T Consensus 828 mSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 828 MSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred cccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 45 8999999999999999999999999999999999999999999999999999999999998643
No 5
>KOG4278|consensus
Probab=99.71 E-value=5.5e-17 Score=98.21 Aligned_cols=65 Identities=37% Similarity=0.743 Sum_probs=61.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
|--||+|.+..+|+..+..|+|+..|..||+.+|+||..||+.+|.+||+|++|...|+.++..+
T Consensus 463 GMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 463 GMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred CCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 66799999999999999999999999999999999999999999999999999999999988653
No 6
>KOG0200|consensus
Probab=99.67 E-value=6.2e-16 Score=93.43 Aligned_cols=63 Identities=27% Similarity=0.568 Sum_probs=58.6
Q ss_pred cCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEP-LADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~-~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||++.. ..++++.+.+|+|+..|..|+.++|++|..||+.+|.+||+|.+++..|...+.
T Consensus 518 G~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 518 GGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred CCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 899999987 678888899999999999999999999999999999999999999999988643
No 7
>KOG1095|consensus
Probab=99.66 E-value=3.6e-16 Score=97.69 Aligned_cols=64 Identities=27% Similarity=0.464 Sum_probs=59.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||++.++.+|...+.+|.|++.|..||..+|++|..||+.+|++||+|..|+..+..+...
T Consensus 901 G~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 901 GATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 8999999999999998988889999999999999999999999999999999999988777654
No 8
>KOG1024|consensus
Probab=99.65 E-value=7.1e-16 Score=89.29 Aligned_cols=64 Identities=28% Similarity=0.505 Sum_probs=61.1
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|+.||...++.|+...+++|+|+..|-+||.+++.+|.-||...|++||+|++++..|.+|...
T Consensus 495 g~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 495 GKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred CCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999988643
No 9
>KOG0192|consensus
Probab=99.60 E-value=9e-15 Score=84.14 Aligned_cols=66 Identities=24% Similarity=0.485 Sum_probs=59.4
Q ss_pred CCcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 1 MNRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
++|+.||.+++..++...+ ..+.|+..|..|++.+..+|..||..+|..||+|.+|+..|..+...
T Consensus 240 ~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 240 LTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred HHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 3689999999998777766 67899999999999999999999999999999999999999887654
No 10
>KOG0199|consensus
Probab=99.54 E-value=2.4e-14 Score=87.53 Aligned_cols=57 Identities=23% Similarity=0.533 Sum_probs=54.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
|+.||.|.+..+|++.|..|.|+++|+.|+++||++|..||..+|.+||+|..|...
T Consensus 312 GEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 312 GEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999743
No 11
>PHA02988 hypothetical protein; Provisional
Probab=99.47 E-value=4.2e-13 Score=74.60 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=55.5
Q ss_pred CCcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
++|..||.+.+..++...+ ..+.++..|..++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus 216 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 216 FTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 3689999999888877776 455677777789999999999999999999999999999998775
No 12
>KOG1025|consensus
Probab=99.45 E-value=4.6e-13 Score=83.08 Aligned_cols=65 Identities=25% Similarity=0.502 Sum_probs=61.2
Q ss_pred CC-cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 1 MN-RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 1 ~~-g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|+ |+.||.+++..+|...++.|.|++.|+.|+.++|.+|.+||..++..||.|+++...+.++..
T Consensus 894 mTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 894 MTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 45 999999999999999999999999999999999999999999999999999999999888754
No 13
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.45 E-value=2.2e-13 Score=74.75 Aligned_cols=58 Identities=28% Similarity=0.658 Sum_probs=51.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||.+.+..++...+.++.++..+..++..+++++..||..+|.+||+|.+|+..|
T Consensus 202 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 202 GKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 6799999999999999999999888899999999999999999999999999998765
No 14
>KOG0194|consensus
Probab=99.43 E-value=1.1e-12 Score=77.54 Aligned_cols=65 Identities=32% Similarity=0.495 Sum_probs=60.6
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
+|..||+++++.++...| .+|+|.+.|...|.++..++..||..+|..||+|.++...+..+...
T Consensus 358 ~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 358 NGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred cCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 588999999999999998 88999999999999999999999999999999999999999887653
No 15
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.43 E-value=7.5e-13 Score=72.30 Aligned_cols=62 Identities=27% Similarity=0.602 Sum_probs=56.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||.+.+..++...+..+.+++.|..++.++.++|..||..+|.+||++.+|...|..++
T Consensus 195 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 195 GQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 88999998888888888888888888899999999999999999999999999999987653
No 16
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.42 E-value=1.4e-12 Score=71.62 Aligned_cols=62 Identities=29% Similarity=0.494 Sum_probs=56.2
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
.|..||.+.+..+++..+.++.+++.|..++..+.+++..||..+|.+||++.+|...|.++
T Consensus 204 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 204 YGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 38999999988888888888888888889999999999999999999999999999988764
No 17
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.39 E-value=3.3e-12 Score=69.98 Aligned_cols=62 Identities=26% Similarity=0.616 Sum_probs=56.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||.+.+..++...+..|.++..|..++.++.+++..||..+|.+||++.+|...|..++
T Consensus 195 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 195 GQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred CCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 88999999888888888899888888899999999999999999999999999999887653
No 18
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.35 E-value=4.5e-12 Score=69.93 Aligned_cols=60 Identities=22% Similarity=0.502 Sum_probs=55.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+.....|..++.++.+|+..||..+|.+||++.+|+..|..
T Consensus 223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 223 GLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 888999998888888888888777888999999999999999999999999999998864
No 19
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.35 E-value=1.1e-11 Score=68.72 Aligned_cols=64 Identities=28% Similarity=0.603 Sum_probs=58.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+....++...+..+.+...|..++.++.+++..||..+|.+||++.+++..|+.++..
T Consensus 226 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 226 GGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 8899999988888888888888888888999999999999999999999999999999998764
No 20
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.32 E-value=1.8e-11 Score=67.05 Aligned_cols=61 Identities=39% Similarity=0.788 Sum_probs=55.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||++.+..++...+..+.+...|..++.++.+++.+||..+|.+||++.++.+.|+.+
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 202 GMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 8899999888888888888888888889999999999999999999999999999998875
No 21
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.32 E-value=1.6e-11 Score=67.37 Aligned_cols=61 Identities=21% Similarity=0.469 Sum_probs=54.9
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+....++...+..+.+...+..++..+.+++..||..+|++||++.+++..|+.+
T Consensus 211 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 211 GQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 7889999888888888888887777788999999999999999999999999999998764
No 22
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.32 E-value=1.4e-11 Score=67.24 Aligned_cols=60 Identities=30% Similarity=0.626 Sum_probs=54.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+.+++.+..++.++.++|..||..+|.+||++.+++..|+.
T Consensus 201 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 201 GQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 789999998888888888888888888999999999999999999999999999998875
No 23
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.31 E-value=2.2e-11 Score=67.14 Aligned_cols=63 Identities=29% Similarity=0.547 Sum_probs=56.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||.+.+..++...+..+.++..+..++.++.+++..||..+|.+||++.+++..|..+..
T Consensus 216 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 889999988878877788888877777889999999999999999999999999999998865
No 24
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.30 E-value=1.5e-11 Score=67.90 Aligned_cols=60 Identities=23% Similarity=0.511 Sum_probs=54.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+....++...+.++...+.|..++.++.+++..||+.+|.+||++.+|+..|+.
T Consensus 223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 223 GLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 778999988888888888888777788999999999999999999999999999998764
No 25
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.29 E-value=4.8e-11 Score=66.04 Aligned_cols=64 Identities=25% Similarity=0.483 Sum_probs=57.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+....++...+..|.++..+..++.+++.++..||..+|.+||++.++...|..+...
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 208 GAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 8899999988877777888888888888999999999999999999999999999988887643
No 26
>KOG0193|consensus
Probab=99.28 E-value=2.9e-12 Score=77.15 Aligned_cols=65 Identities=25% Similarity=0.432 Sum_probs=56.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEA----PEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~----p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|+|+.||.....++|+.+|.+|+-.+. -.+|+.++.+|+..||.+++.+||.|.+|+..|..++.
T Consensus 587 ltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 587 LTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 579999998788899999999964332 25789999999999999999999999999998887765
No 27
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.27 E-value=5.3e-11 Score=66.37 Aligned_cols=64 Identities=31% Similarity=0.599 Sum_probs=57.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.+..++...+..+.+...|..++.++.+++..||..+|.+||++.+++..|..+...
T Consensus 215 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 215 GGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 8899999988888888888887777888999999999999999999999999999998887653
No 28
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.27 E-value=3.6e-11 Score=65.61 Aligned_cols=58 Identities=26% Similarity=0.460 Sum_probs=52.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||.+.+..++...+..+.++..|...+.++.+++.+||..+|.+||++.+++..|
T Consensus 198 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 198 GKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 7889999888888888888888877888899999999999999999999999998765
No 29
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.27 E-value=2.8e-11 Score=66.14 Aligned_cols=60 Identities=37% Similarity=0.710 Sum_probs=54.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+.+.+.+..++.++.+++.+||..+|.+||++.++...|+.
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 200 GRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 889999988888888888888888888899999999999999999999999999988764
No 30
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.26 E-value=7e-11 Score=64.77 Aligned_cols=61 Identities=33% Similarity=0.592 Sum_probs=55.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+....++...+..+.+.+.+..++..+.+++..||..+|.+||++.+++..|..+
T Consensus 205 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 205 GERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 8899999988888888888888777888999999999999999999999999999998765
No 31
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.26 E-value=4.4e-11 Score=65.37 Aligned_cols=60 Identities=32% Similarity=0.573 Sum_probs=53.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+....++...+..+.+.+.+..++.++.+++.+||..+|.+||+++++...|+.
T Consensus 201 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 201 GKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 889999988888888888887777777899999999999999999999999999998875
No 32
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.26 E-value=3.7e-11 Score=65.57 Aligned_cols=62 Identities=32% Similarity=0.569 Sum_probs=55.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||...+..++...+..+.+.+.|..++..+++++.+||..+|.+||++.++...|..+.
T Consensus 195 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 195 GAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 88999998888888888888877888899999999999999999999999999999887653
No 33
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.25 E-value=6.4e-11 Score=66.56 Aligned_cols=64 Identities=22% Similarity=0.483 Sum_probs=56.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.+..++...+..+.+++.|..++.++.+++..||..+|.+||++.+++..+..+...
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 208 GSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 8899999888777777788888888888999999999999999999999999999998877643
No 34
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.25 E-value=9.8e-11 Score=65.41 Aligned_cols=64 Identities=31% Similarity=0.580 Sum_probs=58.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.+..++...+..+.+...+..++.++.+++.+||..+|.+||++.+++..|.+++.-
T Consensus 236 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 236 GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 7889999988888888888888778888999999999999999999999999999999988753
No 35
>KOG4721|consensus
Probab=99.24 E-value=5.2e-12 Score=76.39 Aligned_cols=63 Identities=22% Similarity=0.404 Sum_probs=56.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
++|+.||.+.....|++.|-.+ ..++.|..||..+.-||..||..-|.+||+|.+|+.+|+-+
T Consensus 305 LT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 305 LTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 4799999999999999988544 66889999999999999999999999999999999887654
No 36
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.24 E-value=9.8e-11 Score=64.19 Aligned_cols=61 Identities=26% Similarity=0.514 Sum_probs=54.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||...+..++...+..+.+.+.+..++.++++++..||..+|.+||++.+++..|.++
T Consensus 207 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 207 GERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 8899988888788888887877777778999999999999999999999999999988765
No 37
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.23 E-value=1.2e-10 Score=63.64 Aligned_cols=63 Identities=30% Similarity=0.532 Sum_probs=54.9
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||.+.+..++...+..+.++..+..++..+.+++..||..+|.+||++.+++..|+.++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 199 GAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 567888888777777788887777778889999999999999999999999999999988764
No 38
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.23 E-value=9.2e-11 Score=64.26 Aligned_cols=61 Identities=25% Similarity=0.500 Sum_probs=55.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+.+..++...+..+..+..|..++.++.+++.+||..+|.+||++.+++..|..+
T Consensus 212 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 212 GQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 7899999988888888888877778889999999999999999999999999999998765
No 39
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.23 E-value=1.2e-10 Score=64.60 Aligned_cols=65 Identities=20% Similarity=0.463 Sum_probs=57.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
|..||.+.+..++...+..|.....+..++.++.+++.+||..+|.+||++.++...|+.+...+
T Consensus 219 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 219 GKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 78999998888888888888776777789999999999999999999999999999998887643
No 40
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.22 E-value=8.4e-11 Score=66.55 Aligned_cols=64 Identities=28% Similarity=0.500 Sum_probs=54.2
Q ss_pred cCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.... .+...+..|.++..|..++.++.+++..||..+|.+||++.+++..|+.++.+
T Consensus 273 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 273 GASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 88999987654 44555677777777888999999999999999999999999999999988754
No 41
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.22 E-value=1.7e-10 Score=64.61 Aligned_cols=65 Identities=31% Similarity=0.588 Sum_probs=58.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
|..||.+.+..++...+..+.+...|..++.++.+++..||..+|.+||++.+++..|..++...
T Consensus 239 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 239 GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred CCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 78899988887888778888877788889999999999999999999999999999999987653
No 42
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.22 E-value=9e-11 Score=64.58 Aligned_cols=62 Identities=29% Similarity=0.595 Sum_probs=55.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||.+.+..++...+..+.+...+..++.++.+++.+||..+|.+||++.+++..|..++
T Consensus 208 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 208 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 88999998887877778888777777889999999999999999999999999999998875
No 43
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.22 E-value=1.5e-10 Score=64.20 Aligned_cols=62 Identities=34% Similarity=0.696 Sum_probs=56.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||.+.+..++...+..+.++..|..++.++.+++.+||..+|.+||++.+++..|..+.
T Consensus 231 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 231 GGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 88999999888888888888888888889999999999999999999999999999998764
No 44
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.22 E-value=1.5e-10 Score=63.59 Aligned_cols=65 Identities=29% Similarity=0.609 Sum_probs=58.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
.|..||.+.+..+....+..+.+++.|..++.++.+++.+||..+|.+||++.+++..|..+..+
T Consensus 204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 204 LGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 38899999988777777888888888889999999999999999999999999999999887654
No 45
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.22 E-value=1.3e-10 Score=64.55 Aligned_cols=64 Identities=20% Similarity=0.402 Sum_probs=57.1
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||...+..++...+..+.....+..++.++.+++..||..+|.+||++.++...|..+...
T Consensus 222 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 222 GKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 8899999888888888888877777788999999999999999999999999999999988653
No 46
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.22 E-value=1.2e-10 Score=63.90 Aligned_cols=61 Identities=28% Similarity=0.520 Sum_probs=54.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+.+..+....+.++.+.+.+..++.++.+++.+||..+|.+||++.+++..|..+
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 206 GERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 8899999888777777888887777788999999999999999999999999999988764
No 47
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.22 E-value=8.6e-11 Score=64.62 Aligned_cols=59 Identities=31% Similarity=0.608 Sum_probs=52.9
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..++...+..+..+..|..++.++.+++..||..+|.+||++.+++..|.
T Consensus 218 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 218 AEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 88899999888888878777777788889999999999999999999999999998764
No 48
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.21 E-value=1.9e-10 Score=63.51 Aligned_cols=64 Identities=23% Similarity=0.480 Sum_probs=58.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.+..++...+..+...+.|..++.++.+++.+||..+|.+||++.+++..|.++...
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 208 GAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 8999999988888888888887788888999999999999999999999999999999988654
No 49
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.21 E-value=1e-10 Score=64.18 Aligned_cols=61 Identities=25% Similarity=0.482 Sum_probs=54.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+.+..++...+..+.+.+.+..++.++.+++..||..+|.+||++.+|+..|+.+
T Consensus 208 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 208 GERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 8899999888888888877777777888999999999999999999999999999988764
No 50
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.21 E-value=7.8e-11 Score=64.45 Aligned_cols=60 Identities=37% Similarity=0.696 Sum_probs=53.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+.+++.+..++..+.+++..||..+|.+||++.++...|+.
T Consensus 201 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 201 GRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 889999988888887787777777778899999999999999999999999999998864
No 51
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.20 E-value=1.1e-10 Score=63.78 Aligned_cols=60 Identities=47% Similarity=0.878 Sum_probs=53.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||...+..++...+..+.....+..++..+.+++.+||..+|.+||++.++...|+.
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 196 GRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 889999888888888888887777788899999999999999999999999999988764
No 52
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.20 E-value=1.1e-10 Score=63.90 Aligned_cols=60 Identities=32% Similarity=0.622 Sum_probs=52.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+....+....+..+...+.+...+..+.+++..||..+|.+||++.+++..|+.
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 200 GRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 889999988877777777777777778899999999999999999999999999988764
No 53
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.19 E-value=1.2e-10 Score=63.53 Aligned_cols=59 Identities=41% Similarity=0.805 Sum_probs=53.2
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..+....+..+.++..+..++..+.+++..||..+|.+||++.+++..|.
T Consensus 194 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 194 GRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 88999999888888888888877777889999999999999999999999999998765
No 54
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.19 E-value=1.5e-10 Score=63.77 Aligned_cols=59 Identities=20% Similarity=0.494 Sum_probs=52.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..++...+..|.....+..++.++.+++.+||..+|.+||++.+++..|+
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 221 GKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 88999998888888888888766667789999999999999999999999999998875
No 55
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.18 E-value=1.6e-10 Score=63.09 Aligned_cols=60 Identities=37% Similarity=0.660 Sum_probs=53.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+.......+..+.+.+.+..++.++.+++.+||..+|.+||+++++...|+.
T Consensus 201 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 201 GRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 889999988888888888888777788889999999999999999999999999988764
No 56
>KOG1094|consensus
Probab=99.18 E-value=6.8e-11 Score=71.65 Aligned_cols=61 Identities=30% Similarity=0.475 Sum_probs=51.6
Q ss_pred cCCCCCCCCHHHHHHHHHc----C---CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEK----G---YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~----g---~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
.+.||+.++..++++.... + ..+..|..||.+++++|..||+.+..+||+|++++..|...
T Consensus 737 ~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 737 REQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 5789999999998876532 1 23667899999999999999999999999999999887653
No 57
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.18 E-value=1.8e-10 Score=63.08 Aligned_cols=60 Identities=33% Similarity=0.656 Sum_probs=53.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+...+.+...+.++.+++.+||..+|.+||++.++...|+.
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 200 GRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 889999988887777788887777778899999999999999999999999999988864
No 58
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.17 E-value=2e-10 Score=63.56 Aligned_cols=60 Identities=25% Similarity=0.537 Sum_probs=53.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+..++.+..++.++.+++..||..+|.+||++.+|...|..
T Consensus 223 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 223 GLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 788999988888888888887777788899999999999999999999999999988753
No 59
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.17 E-value=3.8e-10 Score=63.93 Aligned_cols=64 Identities=30% Similarity=0.577 Sum_probs=57.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.+..++...+..+.+...+..++.++.+++.+||..+|.+||++.+++..|..+...
T Consensus 233 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 233 GGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 7889999988888888888888788888999999999999999999999999999999988744
No 60
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.17 E-value=3e-10 Score=62.37 Aligned_cols=62 Identities=34% Similarity=0.596 Sum_probs=54.2
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||.+....++...+..+.+.+.+..++..+.+++.+||..+|.+||++.+++..|+.++
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 200 GRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 78899998888877777777766667789999999999999999999999999999988765
No 61
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.17 E-value=4.7e-10 Score=63.04 Aligned_cols=63 Identities=30% Similarity=0.592 Sum_probs=56.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||.+.+..++...+..+.++..|..++.++.+++.+||..+|.+||++.+++..|..+..
T Consensus 233 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 233 GGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 788999988888888888887777788899999999999999999999999999999988764
No 62
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.17 E-value=2.4e-10 Score=62.45 Aligned_cols=58 Identities=31% Similarity=0.553 Sum_probs=52.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||.+.+..++...+..+.+...|..++.++.+++.+||..+|.+||++.+++..|
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 198 GKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 7899998888888888888888888888999999999999999999999999998765
No 63
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.17 E-value=2.1e-10 Score=62.78 Aligned_cols=58 Identities=24% Similarity=0.395 Sum_probs=51.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||...+..++...+..+.+...+...+..+.+++..||..+|.+||++.+|+..+
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 198 GKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 7889998888788888888888777788899999999999999999999999998765
No 64
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.16 E-value=3.4e-10 Score=62.48 Aligned_cols=59 Identities=25% Similarity=0.562 Sum_probs=52.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..++...+..+.+...|..++..+.+++..||..+|.+||++.+++..|.
T Consensus 218 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 218 GYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 88999998888888778777777778889999999999999999999999999998875
No 65
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.15 E-value=4e-10 Score=62.20 Aligned_cols=63 Identities=25% Similarity=0.487 Sum_probs=55.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||.+.....+...+..+.+.+.+..++.++.+++..||..+|..||++.+++..+..+..
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 208 GAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 788999888877777788888777788899999999999999999999999999988877643
No 66
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.15 E-value=3.1e-10 Score=61.90 Aligned_cols=60 Identities=55% Similarity=1.005 Sum_probs=53.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||...+..++...+..+.+...|..++.++.+++..||..+|.+||++.+++..|+.
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 196 GRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 788999888888888787787777788899999999999999999999999999998864
No 67
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.15 E-value=3.1e-10 Score=61.60 Aligned_cols=58 Identities=40% Similarity=0.715 Sum_probs=53.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||.+.+..++...+..+.+...|..++.++.+++..||..+|.+||++.+++..|
T Consensus 204 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 204 GATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 6899999998888888888888888889999999999999999999999999999876
No 68
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.15 E-value=5.8e-10 Score=62.40 Aligned_cols=64 Identities=22% Similarity=0.479 Sum_probs=56.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+....++...+..+.+++.+..++.++.+++..||..+|.+||++.+++..|..+...
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 208 GGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 7899999887777777788887777788999999999999999999999999999998887643
No 69
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.14 E-value=3.4e-10 Score=66.03 Aligned_cols=62 Identities=26% Similarity=0.550 Sum_probs=52.8
Q ss_pred cCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLAD-VVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~-i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||......+ ....+..|.++..|..++.++.+++.+||..+|.+||++.+|+..|+.++
T Consensus 338 g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 338 GGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 788998876554 34556778888888889999999999999999999999999999998765
No 70
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.14 E-value=2.9e-10 Score=61.97 Aligned_cols=59 Identities=14% Similarity=0.205 Sum_probs=51.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||...+.......+..+...+.|..++.++.+++.+||..+|.+||++.+|+..
T Consensus 194 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 194 CTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred hhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 36889999888777777788887777778899999999999999999999999998753
No 71
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.14 E-value=3.6e-10 Score=62.56 Aligned_cols=59 Identities=22% Similarity=0.568 Sum_probs=52.2
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||...+..+....+..+.....|..++..+.+++..||..+|.+||++.+|...|.
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 221 GKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 78899888887777778788777778889999999999999999999999999998764
No 72
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.14 E-value=3.9e-10 Score=61.67 Aligned_cols=60 Identities=35% Similarity=0.588 Sum_probs=52.9
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
|..||.+.+..++...+..+.+.+.+...+.++.+++.+||..+|.+||++.++...|+.
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 200 GRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 788999988878777777777777788899999999999999999999999999887754
No 73
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.14 E-value=3.6e-10 Score=61.91 Aligned_cols=59 Identities=29% Similarity=0.617 Sum_probs=52.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||...+..++...+..+.+...+..+|..+.+++..||..+|.+||++.++...|.
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 210 GQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 78899988887877777777777778889999999999999999999999999998775
No 74
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.13 E-value=4.6e-10 Score=62.22 Aligned_cols=59 Identities=29% Similarity=0.535 Sum_probs=52.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..++...+..+..+..|..++.++++++..||..+|.+||++.+++..|+
T Consensus 229 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 229 GMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 67899888888888888888777777889999999999999999999999999998775
No 75
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.13 E-value=6.3e-10 Score=62.33 Aligned_cols=64 Identities=28% Similarity=0.566 Sum_probs=56.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.+..++...+..+.++..+..++.++.+++.+||..+|.+||++.+++..+..+...
T Consensus 220 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 220 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 8899998888777777777777777778899999999999999999999999999998887654
No 76
>KOG0195|consensus
Probab=99.12 E-value=1.3e-10 Score=65.66 Aligned_cols=63 Identities=17% Similarity=0.265 Sum_probs=56.3
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+++.||.++++.++--+| .+|.|..+|+.++..+..||.-|...+|.+||.|..|+-.|+++.
T Consensus 384 trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 384 TREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 578999999998764444 889999999999999999999999999999999999998887753
No 77
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.12 E-value=3.7e-10 Score=65.12 Aligned_cols=61 Identities=30% Similarity=0.599 Sum_probs=51.7
Q ss_pred cCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+.... .+...+..+.+...|...+.++.+++..||..+|.+||++.+|+..|+..
T Consensus 313 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 313 GSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 78899887654 55566677887777788899999999999999999999999999988753
No 78
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.12 E-value=8e-10 Score=60.02 Aligned_cols=58 Identities=33% Similarity=0.696 Sum_probs=52.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||.+.....+...+..+.+...+..++.++.+++.+||..+|.+||++.++...|
T Consensus 191 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 191 GVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 7889999988887778888888777888999999999999999999999999998775
No 79
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.10 E-value=7e-10 Score=63.18 Aligned_cols=64 Identities=27% Similarity=0.499 Sum_probs=54.0
Q ss_pred cCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+.... ++...+..+.++..|..+++++.+++..||..+|.+||++.+|+..|..+++.
T Consensus 278 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 278 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 78899887544 44555677777777778899999999999999999999999999999998764
No 80
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.10 E-value=1e-09 Score=60.22 Aligned_cols=61 Identities=26% Similarity=0.542 Sum_probs=53.0
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+....++...+..+..+..+..++..+.+++..||..+|++||++.+++..|+.+
T Consensus 212 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 212 GQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 7889988887777777777776666778899999999999999999999999999998764
No 81
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.09 E-value=6.9e-10 Score=64.04 Aligned_cols=62 Identities=32% Similarity=0.600 Sum_probs=51.8
Q ss_pred cCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLAD-VVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 3 g~~Py~~~~~~~-i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
|..||.+..... +...+..+.++..|...+.++.+++..||..+|.+||++.++++.|..++
T Consensus 311 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 311 GKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 889998876543 34455667777777788999999999999999999999999999998764
No 82
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.09 E-value=1e-09 Score=60.95 Aligned_cols=66 Identities=26% Similarity=0.502 Sum_probs=56.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhc
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNSL 68 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~~ 68 (69)
|..||.+.+..++...+..+.....+..++.++.+++..||..+|.+||++.+++..+...+...+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~ 283 (288)
T cd05061 218 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 283 (288)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCC
Confidence 678999988888887777777677778889999999999999999999999999999887765543
No 83
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.09 E-value=5.2e-10 Score=65.25 Aligned_cols=63 Identities=22% Similarity=0.497 Sum_probs=53.7
Q ss_pred cCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||.+.... .+...+..+.++..+..++.++.+++..||..+|.+||++.++.+.|..++.
T Consensus 336 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 336 GGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred CCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 78899887554 4455667787888888899999999999999999999999999999988754
No 84
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.08 E-value=8.6e-10 Score=59.93 Aligned_cols=59 Identities=32% Similarity=0.628 Sum_probs=51.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.........+..+.+...|..++.++.+++.+||..+|.+||++.+++..|.
T Consensus 192 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 192 GDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred cCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 78899988877777777777777778889999999999999999999999999998875
No 85
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.08 E-value=9.6e-10 Score=60.66 Aligned_cols=59 Identities=24% Similarity=0.587 Sum_probs=51.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..++...+..+.....+..++..+.+++..||..+|.+||++.+++..|+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 218 AEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 67899998888877777777666677889999999999999999999999999998765
No 86
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.07 E-value=1.3e-09 Score=59.39 Aligned_cols=58 Identities=26% Similarity=0.532 Sum_probs=51.6
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||......++...+..+.++..|...+.++++++..||..+|.+||++.+++..|
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 198 GKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 7889988887788888888888777888899999999999999999999999998765
No 87
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.06 E-value=1e-09 Score=59.67 Aligned_cols=57 Identities=11% Similarity=0.065 Sum_probs=49.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...+..+....+..+..+..+..++.++.+++.+||..+|++||++.+++.
T Consensus 196 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 196 TGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 688999988877777777778777777788999999999999999999999999875
No 88
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.06 E-value=1.4e-09 Score=59.16 Aligned_cols=59 Identities=25% Similarity=0.555 Sum_probs=51.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||...+.......+..+.+...+..++..+.+++.+||..+|.+||++.++...|.
T Consensus 193 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 193 GAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 78899888887777777777777778889999999999999999999999999998764
No 89
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.04 E-value=1.9e-09 Score=61.47 Aligned_cols=64 Identities=30% Similarity=0.512 Sum_probs=53.3
Q ss_pred cCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLAD-VVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~-i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
|..||.+....+ ....+..+.+...|..++.++.+++.+||..+|.+||++.+++..|..+++.
T Consensus 272 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 272 GASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred CCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 788998865543 3445567777777788899999999999999999999999999999988764
No 90
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.02 E-value=1.5e-09 Score=59.15 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=50.4
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||......++...+..|..+..+..++.++.+++..||+.+|.+||++.+++.+
T Consensus 196 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 196 TLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred cCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 6888998877777777777787777788899999999999999999999999999863
No 91
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.01 E-value=3.4e-09 Score=58.07 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=47.3
Q ss_pred CcCCCCCCCC--HHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 2 NRAEMSSDEP--LADVVKHVEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 2 ~g~~Py~~~~--~~~i~~~v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
+|..||.... ..++...+..+..++.+ ...+..+.+++.+||..+|.+||++.+++..++.+
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 201 ALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred cCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 5788886543 23555566555444433 46788999999999999999999999999988765
No 92
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.00 E-value=4.1e-09 Score=57.43 Aligned_cols=59 Identities=32% Similarity=0.623 Sum_probs=49.9
Q ss_pred cCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVE-KGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~-~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+.+..++...+. .+.....+...+.++.+++..||..+|.+||++.+++..|.
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 197 GEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 889999888877776664 45666667788999999999999999999999999998763
No 93
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.99 E-value=3.8e-09 Score=59.22 Aligned_cols=61 Identities=30% Similarity=0.597 Sum_probs=50.4
Q ss_pred cCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLAD-VVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 3 g~~Py~~~~~~~-i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
|..||.+....+ +...+..+.+...+...+.++.+++.+||..+|.+||++.+++..|.++
T Consensus 240 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 240 GSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 888998877653 4445566766666777899999999999999999999999999988764
No 94
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.99 E-value=3.3e-09 Score=57.61 Aligned_cols=57 Identities=37% Similarity=0.714 Sum_probs=51.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
|..||.+.+..++...+..+.+...+..++.++.+++.+||..+|.+||++.+++..
T Consensus 201 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 201 GESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 788999888888888888888888888899999999999999999999999998865
No 95
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.98 E-value=3.2e-09 Score=58.17 Aligned_cols=58 Identities=14% Similarity=0.237 Sum_probs=48.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..+.+..+..+..+..|..++.++.+++..||..+|.+||++.+++.
T Consensus 206 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 206 LTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 3688999988766555556666667777889999999999999999999999999875
No 96
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.96 E-value=5.4e-09 Score=57.12 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=48.6
Q ss_pred CcCCCCCCC--CHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 2 NRAEMSSDE--PLADVVKHVEKGYQMEAPE-GCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 2 ~g~~Py~~~--~~~~i~~~v~~g~r~~~p~-~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+|..||.+. +..++...+..+...+.|. ..+.++.+++..||..+|.+||++.+|+..+..+.
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 201 ALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 577788544 3335555566666665555 78889999999999999999999999999887753
No 97
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.95 E-value=6.2e-09 Score=58.21 Aligned_cols=59 Identities=25% Similarity=0.441 Sum_probs=45.6
Q ss_pred cCCCCCCCCHHHHHHHHHc----C---CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEK----G---YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~----g---~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
+..||.+.+..++...+.. . .....|..++..+.+++..||..+|.+||++.+|...|.
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 6789998887766554422 1 123346678999999999999999999999999987764
No 98
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.95 E-value=3.8e-09 Score=57.48 Aligned_cols=57 Identities=14% Similarity=0.233 Sum_probs=50.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+..++...+..+.....+...+.++.+++..||..+|.+||++.+|+.
T Consensus 205 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 205 ALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 588999988877777778877766777889999999999999999999999999875
No 99
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.94 E-value=6.3e-09 Score=57.11 Aligned_cols=61 Identities=10% Similarity=0.103 Sum_probs=47.4
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
++|..||.......+...+..+...+.+ ..++.++.+++..||..+|.+||++.++...+.
T Consensus 207 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 207 CTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 3578899877766666666555544433 367899999999999999999999999987663
No 100
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.93 E-value=3.7e-09 Score=57.46 Aligned_cols=57 Identities=18% Similarity=0.274 Sum_probs=47.9
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+.......+..+...+.+..++.++.+++..||..+|.+||++.+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 196 SLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred hCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 578899888776666666666666667789999999999999999999999999875
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.92 E-value=7.8e-09 Score=57.21 Aligned_cols=46 Identities=35% Similarity=0.811 Sum_probs=39.0
Q ss_pred HHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 19 VEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 19 v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+..+.+++.|..++.++.+++..||..+|.+||++++++..|..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 3445555667788999999999999999999999999999887764
No 102
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.90 E-value=7.1e-09 Score=61.96 Aligned_cols=58 Identities=21% Similarity=0.249 Sum_probs=51.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+..+++..+..+...+.|..++.++.+++..||..+|.+||++.+++..
T Consensus 240 tG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 240 TLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 5889999988888888888887777788999999999999999999999999998753
No 103
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.90 E-value=7.9e-09 Score=56.28 Aligned_cols=58 Identities=19% Similarity=0.292 Sum_probs=48.4
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+.......+..+..+..+...+.++.+++..||..+|.+||++.+++.
T Consensus 196 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 196 ATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 4688899887776666666677665666788999999999999999999999999875
No 104
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.90 E-value=7.7e-09 Score=57.09 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=47.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.....+...+..+..+..+..++.++.+++..||..+|.+||++.+++.
T Consensus 195 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 195 AKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred HhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 3588898877766666666666555556678899999999999999999999999986
No 105
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.89 E-value=4.8e-09 Score=57.94 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=48.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+.......+..+..+..+..++.++.+++.+||..+|.+||++.+++..
T Consensus 196 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 196 KGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 5888998888776666666666655666788999999999999999999999999764
No 106
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.89 E-value=1.3e-08 Score=56.70 Aligned_cols=59 Identities=25% Similarity=0.540 Sum_probs=45.7
Q ss_pred cCCCCCCCCHHHHHHHHHc-----C--CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEK-----G--YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~-----g--~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||...+..++...+.. + ...+.+..++..+.+++..||..+|.+||++.+|...|.
T Consensus 230 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 230 KEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 6789988877666544321 1 223446678999999999999999999999999998775
No 107
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.88 E-value=8.6e-09 Score=56.06 Aligned_cols=58 Identities=14% Similarity=0.255 Sum_probs=47.1
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||...+..+....+..+...+.++..+.++.+++..||..+|++||++.+++..
T Consensus 197 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 197 TLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred hCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 5788998877766665566666555667789999999999999999999999998753
No 108
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.87 E-value=1.4e-08 Score=56.08 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=48.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+.......+..+..+..+..++.++.+++..||..+|.+||++.+++..
T Consensus 196 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 196 KGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 5889998887766666666666666667789999999999999999999999999873
No 109
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.86 E-value=1.5e-08 Score=56.11 Aligned_cols=57 Identities=21% Similarity=0.309 Sum_probs=42.7
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
+|..||.+.+..+....+....+ .|...+.++.++|.+||..+|.+||+|.+|+..|
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 217 DGEVPLKERTPSEKERFYEKKHR--LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred CCCCCccccChHHHHHHHHhccC--CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 47888888776655444333332 2344567899999999999999999999998876
No 110
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.84 E-value=1.4e-08 Score=55.37 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=48.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+..+....+..|...+.+..++.++.+++..||..+|.+||++.+++..
T Consensus 196 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 196 TLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 5788998877777777777776666667789999999999999999999999998764
No 111
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.84 E-value=1.9e-08 Score=54.66 Aligned_cols=57 Identities=19% Similarity=0.287 Sum_probs=49.6
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...+..++...+..+..+..+...+.++.+++.+||..+|.+||++.+++.
T Consensus 196 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 196 TFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 588999988887777777777766677788999999999999999999999999875
No 112
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.84 E-value=2.1e-08 Score=54.94 Aligned_cols=63 Identities=11% Similarity=0.085 Sum_probs=46.7
Q ss_pred CcCCCCCCCCH--HHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 2 NRAEMSSDEPL--ADVVKHVEKGYQMEA-PEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 2 ~g~~Py~~~~~--~~i~~~v~~g~r~~~-p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+|..||.+... .+....+..+..++. +...+.++.+++.+||..+|.+||++.+|...+.++.
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 201 ALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred hCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 57888876543 244444544433333 3568899999999999999999999999999887763
No 113
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.84 E-value=1.7e-08 Score=59.97 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=50.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..++...+..|...+.|..++.++.+++..||..+|.+||++.+++.
T Consensus 265 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 265 LTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 3688999998888888888778776777889999999999999999999999999864
No 114
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.83 E-value=2.4e-08 Score=54.91 Aligned_cols=58 Identities=22% Similarity=0.325 Sum_probs=42.4
Q ss_pred cCCCCCCCCHHHHHHHHHcCC--CCCCC---CCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGY--QMEAP---EGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~--r~~~p---~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||......+.......+. +.+.| ...+..+.++|..|| .+|++||++.+|+..|.
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 206 GSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 889999888776654433322 22222 346788999999999 58999999999997653
No 115
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.83 E-value=1.5e-08 Score=55.78 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=40.1
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
+|..||.+....+........... ....+.++.++|.+||..+|.+||+|.+|+..+
T Consensus 205 ~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 205 NGEIPLKDKTLAEKERFYEGQCML--VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCCCCCCCcchhHHHHHHhcCccC--CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 467777776655443332222222 223467899999999999999999999998765
No 116
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.83 E-value=2.4e-08 Score=55.00 Aligned_cols=48 Identities=27% Similarity=0.686 Sum_probs=40.3
Q ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 16 VKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 16 ~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
...+..+.+.+.+..++.++.+++..||..+|.+||++.+|+..|..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 344456666666778999999999999999999999999999988764
No 117
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.82 E-value=2.8e-08 Score=55.40 Aligned_cols=59 Identities=22% Similarity=0.388 Sum_probs=45.2
Q ss_pred cCCCCCCCCHHHHHHHHHc-----CC--CCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEK-----GY--QMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~-----g~--r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||...+..++...+.. +. ....+..++..+.+++.+||..+|.+||++.+|+..|.
T Consensus 229 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 229 KEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 6779988887766554421 11 23345678999999999999999999999999988764
No 118
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.82 E-value=2.8e-08 Score=53.81 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=48.3
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...+..++...+..+.....|..++.++.+++..||..+|++||++.+++.
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 198 TLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred cCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 588899888777777766666666667789999999999999999999999999875
No 119
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.81 E-value=2.6e-08 Score=54.41 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=47.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+..++...+..+..+..+..++.++.++|..||..+|.+||++.+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 200 CLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred hCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 577888777666666666667666667788999999999999999999999999875
No 120
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.80 E-value=2.2e-08 Score=54.68 Aligned_cols=59 Identities=10% Similarity=0.213 Sum_probs=46.3
Q ss_pred CCcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+ ........|..++.++.+++..||..+|.+||++.+++..
T Consensus 201 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 201 LTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 4688999887665444344 3345556778899999999999999999999999998764
No 121
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.80 E-value=2.6e-08 Score=54.84 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=47.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEG-CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~-~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..++...+..+..+..+.. ++.++.+++..||..+|++||++.+++.
T Consensus 192 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 192 AKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 368899988777666666666665555544 8899999999999999999999999965
No 122
>KOG0581|consensus
Probab=98.80 E-value=3.2e-08 Score=57.08 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=50.3
Q ss_pred CcCCCCCCC-----CHHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDE-----PLADVVKHVEKGYQMEAPEG-CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~-----~~~~i~~~v~~g~r~~~p~~-~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.|..||+.- ...+.+..|..+..|..|.. +++++..++..|++.+|.+||+..+++.
T Consensus 272 ~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 272 IGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred hCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 488999874 55688888999988888886 9999999999999999999999999875
No 123
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.78 E-value=4.9e-08 Score=53.75 Aligned_cols=59 Identities=27% Similarity=0.570 Sum_probs=48.2
Q ss_pred cCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQ-MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r-~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||.+....++...+..+.. ...+..++..+.+++..||..+|.+||++.+++..|.
T Consensus 215 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 215 GELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 6789988877777776665542 3345678999999999999999999999999998764
No 124
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.76 E-value=5.9e-08 Score=53.92 Aligned_cols=59 Identities=27% Similarity=0.477 Sum_probs=45.4
Q ss_pred cCCCCCCCCHHHHHHHHHcC-----C--CCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKG-----Y--QMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g-----~--r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
|..||...+..++...+... . ..+.+..++.++.+++..||..+|.+||++.+|+..|+
T Consensus 230 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 230 REQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 67888888777666555332 1 12345667899999999999999999999999988764
No 125
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.76 E-value=4.1e-08 Score=54.21 Aligned_cols=58 Identities=14% Similarity=0.142 Sum_probs=47.1
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+..+....+..+..+. .|..++.++.+++..||..+|.+||++.+++..
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 203 QMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred hCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 5889999888777666666665432 456789999999999999999999999999753
No 126
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.75 E-value=8.5e-08 Score=52.84 Aligned_cols=57 Identities=26% Similarity=0.331 Sum_probs=42.5
Q ss_pred cCCCCCCCCHHHHHHHHHcC--CC---CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKG--YQ---MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g--~r---~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||...+..+++..+..+ .. +..+...+..+++++..|| .+|++||++.+|++.|
T Consensus 205 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 205 AAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 67799888777666655332 22 2234457889999999999 6799999999998766
No 127
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.74 E-value=4.1e-08 Score=53.37 Aligned_cols=58 Identities=17% Similarity=0.145 Sum_probs=45.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEK-GYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~-g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||......+....+.. +..+..|..++.++.+++.+||..+|.+||++.+++.
T Consensus 196 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 196 ATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 368899987765544444433 4555567788999999999999999999999999875
No 128
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.74 E-value=3.6e-08 Score=54.00 Aligned_cols=55 Identities=20% Similarity=0.294 Sum_probs=40.3
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 4 AEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
..||...+.......... +...|...+.++.+++..||+.+|.+||++.+|+..|
T Consensus 203 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 203 DKPLSALDSQKKLQFYED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CCChhhccHHHHHHHHHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 466666665543332222 3344556778999999999999999999999999875
No 129
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.74 E-value=5.6e-08 Score=53.77 Aligned_cols=47 Identities=30% Similarity=0.746 Sum_probs=39.6
Q ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 17 KHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 17 ~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
..+..+.+++.+..++.++.+++..||..+|.+||++.+|+..|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 33455666666778999999999999999999999999999988754
No 130
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.74 E-value=6.2e-08 Score=52.88 Aligned_cols=57 Identities=21% Similarity=0.294 Sum_probs=43.6
Q ss_pred CcCCCCCCCCH-HHHHHHHHcCCCCCCCCC--CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPL-ADVVKHVEKGYQMEAPEG--CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~-~~i~~~v~~g~r~~~p~~--~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+... ..+...+..+..+..|.. ++..+.+++.+||..+|.+||++.+++.
T Consensus 201 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 201 TGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred hCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 58899987643 344445555655555654 4899999999999999999999999864
No 131
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.74 E-value=4.8e-08 Score=54.06 Aligned_cols=57 Identities=14% Similarity=0.112 Sum_probs=44.5
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+..+....+..+.. ...|..++.++.+++..||..+|.+||++.+++.
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 203 QIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 58889988877665555544432 2345678999999999999999999999999874
No 132
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.73 E-value=7.7e-08 Score=50.05 Aligned_cols=67 Identities=13% Similarity=0.136 Sum_probs=44.6
Q ss_pred CCcCCCCCCCCHH-HHHHHHHcCCCCC------CCCCCCH--HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 1 MNRAEMSSDEPLA-DVVKHVEKGYQME------APEGCPP--EEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 1 ~~g~~Py~~~~~~-~i~~~v~~g~r~~------~p~~~~~--~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
++|..||...... .....+..+.... .+...+. ++.+++..||..+|.+||++.+++..+.....+.
T Consensus 98 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 98 LDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred HhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 3688899765432 3333333332211 1122333 6899999999999999999999999887776544
No 133
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.73 E-value=5.4e-08 Score=53.43 Aligned_cols=58 Identities=12% Similarity=-0.004 Sum_probs=42.7
Q ss_pred CCcCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVE-KGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~-~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||...........+. ...+...+..++.++.+++.+||..+|.+||++.+++.
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 35888888776654443333 23333334568899999999999999999999999875
No 134
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.70 E-value=9.6e-08 Score=52.23 Aligned_cols=57 Identities=14% Similarity=0.261 Sum_probs=42.2
Q ss_pred CcCCCCCCCC-----HHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEP-----LADVVKHVEKGYQMEAPEG-CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~-----~~~i~~~v~~g~r~~~p~~-~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.... ..+....+..+..+..+.. ++.++.++|..||..+|.+||++.+++.
T Consensus 194 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 194 TGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred hCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 5788887652 2234444445555555544 8899999999999999999999999875
No 135
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.70 E-value=5.6e-08 Score=53.75 Aligned_cols=57 Identities=11% Similarity=-0.010 Sum_probs=41.7
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ-MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r-~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+....+....+..... ...+..++.++.++|..||..+|.+||++.+|+.
T Consensus 221 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 221 EGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 57888887766544433433322 2233568999999999999999999999999875
No 136
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.69 E-value=9.1e-08 Score=52.43 Aligned_cols=57 Identities=11% Similarity=0.097 Sum_probs=44.2
Q ss_pred CcCCCCCCCCHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEK--GYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~--g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...+..+....+.. +..+..+...+.++.+++.+||..+|.+||++.+++.
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 203 TGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 68899988766543333332 3445567789999999999999999999999999875
No 137
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.69 E-value=9.8e-08 Score=52.87 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=45.1
Q ss_pred CcCCCCCCCCHHHHHH---HHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVK---HVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~---~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.......+.. .+..+..+..|..++.++.+++.+||..+|.+||++.+++..
T Consensus 202 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 202 LGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 5888997765544333 334555556677799999999999999999999999999863
No 138
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.68 E-value=7.2e-08 Score=52.66 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=42.8
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAP-----EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p-----~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..+....+..+.....+ ..++.++.+++.+||..+|.+||++.+++.
T Consensus 201 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 201 ATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3688999888776555444333222111 257889999999999999999999999875
No 139
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.68 E-value=9e-08 Score=52.95 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=42.3
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+..+....+..+.. ...|..++.++.+++.+||..+|.+||++.+++..
T Consensus 224 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 224 DGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 57888887765443333333322 22355678899999999999999999999999865
No 140
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.68 E-value=1.3e-07 Score=53.18 Aligned_cols=59 Identities=12% Similarity=0.044 Sum_probs=45.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQME-APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~-~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+..+..+. .+...+..+.++|.+||..+|.+||++.+++..
T Consensus 208 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 208 AERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 35888988877666555565555444 345688899999999999999999999998764
No 141
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.67 E-value=1.7e-07 Score=52.02 Aligned_cols=47 Identities=34% Similarity=0.773 Sum_probs=40.4
Q ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 17 KHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 17 ~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
..+..+.+.+.+..++.++.+++..||..+|.+||++.+++..++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 34456666666778999999999999999999999999999998765
No 142
>KOG0198|consensus
Probab=98.66 E-value=1e-07 Score=54.49 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=47.1
Q ss_pred CCcCCCCCC-CCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 1 MNRAEMSSD-EPLAD-VVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 1 ~~g~~Py~~-~~~~~-i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
++|..||.+ ....+ +......+.-|..|..++.+..+++.+|+..+|..||++.+++.+.
T Consensus 216 ~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 216 LTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred cCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 468999998 34333 3333345556678999999999999999999999999999998754
No 143
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.66 E-value=1.7e-07 Score=51.12 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=45.9
Q ss_pred CcCCCCCCCC---HHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEP---LADVVKHVEKGYQMEAPEG-CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~---~~~i~~~v~~g~r~~~p~~-~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.... ..+....+..+..+..+.. ++..+.+++..||..+|.+||++.+++..
T Consensus 195 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 195 LGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred hCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 5888998774 3455555665555555666 89999999999999999999999999863
No 144
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.65 E-value=1.2e-07 Score=52.74 Aligned_cols=57 Identities=14% Similarity=0.047 Sum_probs=43.4
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQM--EAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~--~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||......+.+..+..+..+ ..+...+.++.+++.+||..+|.+||++.+|+.
T Consensus 228 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 228 DGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 588899888765545455444332 234567789999999999999999999999875
No 145
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.65 E-value=1.9e-07 Score=51.96 Aligned_cols=58 Identities=19% Similarity=0.193 Sum_probs=44.0
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQM--EAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~--~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..+....+..+..+ ..+..++.++.+++.+||..+|++||++.+++.
T Consensus 209 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 209 AQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred hcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 3588898887765555444444332 235678899999999999999999999999975
No 146
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.64 E-value=1.4e-07 Score=52.95 Aligned_cols=58 Identities=10% Similarity=0.071 Sum_probs=43.2
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEA-PEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~-p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+.......+..+..+.. +..++.++.+++.+||..+|.+||++.+|+..
T Consensus 209 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 209 ERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred cCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 57888888776554444444433332 34578899999999999999999999999763
No 147
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.64 E-value=1.1e-07 Score=53.19 Aligned_cols=58 Identities=12% Similarity=0.100 Sum_probs=42.1
Q ss_pred CCcCCCCCCCCH-HHHH--------HHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 1 MNRAEMSSDEPL-ADVV--------KHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 1 ~~g~~Py~~~~~-~~i~--------~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
++|..||.+.+. .+++ ..+..+.. .+..++.++.+++..||..++.+||++.+|...|
T Consensus 227 ~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 227 AGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhCCCCCCccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 368999988833 3322 22222221 2356789999999999999999999999998765
No 148
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.63 E-value=1.4e-07 Score=54.05 Aligned_cols=58 Identities=16% Similarity=-0.012 Sum_probs=43.6
Q ss_pred CcCCCCCCCCH---HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPL---ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~---~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||..... ..+...+..+..+..+..++.++.+++..||..+|.+||++.+++.+
T Consensus 268 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 268 LGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred hCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 57888874322 23333344455566677899999999999999999999999999864
No 149
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.62 E-value=1.1e-07 Score=53.31 Aligned_cols=60 Identities=10% Similarity=0.010 Sum_probs=45.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
++|..||.+.+..++...+..+.. +..+..++.++.+++.+||..+|.+||++..+...+
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 210 LVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 368899999888888877766542 222346899999999999999999999975554443
No 150
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.62 E-value=1.7e-07 Score=51.32 Aligned_cols=58 Identities=14% Similarity=0.227 Sum_probs=46.0
Q ss_pred CCcCCCCCCCC--HHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy925 1 MNRAEMSSDEP--LADVVKHVEK-GYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-----FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~--~~~i~~~v~~-g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-----~~~i~~ 58 (69)
++|..||.+.. ..++...+.. ...+..|..++.++.+++.+||..+|.+|++ +++++.
T Consensus 186 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 186 LTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 36889998776 5566666654 3556667778999999999999999999999 888775
No 151
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.62 E-value=9.6e-08 Score=51.93 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=41.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGY--QMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~--r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...+..+....+.... ....+..++.++.+++.+||..+|.+||++.+++.
T Consensus 194 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 194 EGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 5788888776655444443322 12234567889999999999999999999999875
No 152
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.62 E-value=1.4e-07 Score=52.00 Aligned_cols=57 Identities=14% Similarity=0.067 Sum_probs=41.7
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPE-GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~-~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.........+.....+..+. ..+.++.+++..||..+|.+||++.+++.
T Consensus 197 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 197 TGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred hCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 5888998876654443333332233333 37889999999999999999999999975
No 153
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.61 E-value=2.1e-07 Score=52.51 Aligned_cols=59 Identities=12% Similarity=0.088 Sum_probs=45.6
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ-MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r-~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
+|..||.+.........+..+.. ...+..++..+.+++.+||..+|.+||++.+++...
T Consensus 219 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 219 ERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred hCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 57889888776665655544433 333456888999999999999999999999998754
No 154
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.61 E-value=2.1e-07 Score=51.65 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=42.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+.......+..+.... .+..++.++.+++..||..+|.+||++.+++.
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 211 EGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 5888998877665444444333322 23348999999999999999999999999975
No 155
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.61 E-value=1.8e-07 Score=51.86 Aligned_cols=58 Identities=17% Similarity=0.161 Sum_probs=40.4
Q ss_pred CcCCCCCCCCHH-----------HHHHHHHcCCCCCCCC-CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLA-----------DVVKHVEKGYQMEAPE-GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~-----------~i~~~v~~g~r~~~p~-~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||...... +....+.....+..+. .++.++.+++..||..+|.+||++.+++..
T Consensus 197 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 197 LGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred hCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 588898765431 2222232333333333 388899999999999999999999999864
No 156
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.61 E-value=2.4e-07 Score=51.91 Aligned_cols=58 Identities=12% Similarity=0.153 Sum_probs=43.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..+....+..+.. +..+..++..+.++|.+||..+|.+||++.+|+.
T Consensus 209 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 209 VEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 368889988776544444433322 2345678999999999999999999999999975
No 157
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.61 E-value=9e-08 Score=52.59 Aligned_cols=56 Identities=7% Similarity=0.097 Sum_probs=42.5
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+....+..... ..+..+..|..++..+.+++ .||..+|.+||++++|+.
T Consensus 204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 204 TEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 588899887665433333 34445556777889999998 799899999999999875
No 158
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.60 E-value=1.5e-07 Score=51.76 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=41.4
Q ss_pred CcCCCCCCCCHH-HHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA-DVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~-~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...... .....+ ..+..+..|..++.++.+++..||..+|.+||++.+++.
T Consensus 206 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 206 TGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 577888765433 222222 223344567788999999999999999999999999875
No 159
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.60 E-value=2.2e-07 Score=50.07 Aligned_cols=58 Identities=19% Similarity=0.171 Sum_probs=42.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAP--EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p--~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||...+..+....+........+ ..++.++.+++..||..+|.+||++.+++.
T Consensus 191 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 191 AEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3688899888665554444433333333 334899999999999999999999999875
No 160
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.60 E-value=2.1e-07 Score=50.46 Aligned_cols=57 Identities=25% Similarity=0.311 Sum_probs=45.5
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+.......+..+.....+..++..+.+++..||..+|++||++.+++.
T Consensus 194 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 194 TGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred hCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 477888877765555555555555667788999999999999999999999999874
No 161
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.59 E-value=2.4e-07 Score=51.59 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=44.2
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..+....+..+..+. .+..++..+.+++..||..+|.+||++.+++.
T Consensus 209 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 209 VDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 35788988777666666665553322 23447899999999999999999999999875
No 162
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.59 E-value=1.9e-07 Score=51.16 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=42.3
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+.......+..+.... .+..++.++.+++..||..+|.+||++.+++.
T Consensus 213 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 213 DGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 5888998776654444454443322 23447889999999999999999999999875
No 163
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.59 E-value=2.2e-07 Score=51.88 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=41.8
Q ss_pred CcCCCCCCCCH-HHHHHHHHcCCCCCCC--CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPL-ADVVKHVEKGYQMEAP--EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~-~~i~~~v~~g~r~~~p--~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||..... .+++..+..+.....+ ..++.++.+++..||..+|.+||++.+++..
T Consensus 213 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 213 TGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 58889876433 2445444444333333 3478999999999999999999999999754
No 164
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.58 E-value=2.2e-07 Score=50.58 Aligned_cols=56 Identities=21% Similarity=0.402 Sum_probs=39.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||...+..+.........+.+.+. ...+.+++..||..+|.+||++.+++..|
T Consensus 203 ~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 203 GEEPLSTLSSSEKERFYQDQHRLPMPD--CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCCcccCCchhHHHHHhcCCCCCCCC--chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 466777765444433334333333333 48999999999999999999999998865
No 165
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.58 E-value=5.2e-07 Score=49.60 Aligned_cols=57 Identities=26% Similarity=0.380 Sum_probs=42.7
Q ss_pred cCCCCCCCCHHHHHHHH-HcCC-CCC---CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHV-EKGY-QME---APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v-~~g~-r~~---~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|..||......++...+ ..+. ..+ .+..++..+.+++..|| .+|++||++++|+..|
T Consensus 206 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 206 ADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 78899988876665544 3332 222 23468889999999999 5999999999998876
No 166
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.56 E-value=1.7e-07 Score=50.96 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=45.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCC--CHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGC--PPEEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~--~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
++|..||......++...+..+. ...|..+ +..+.+++..||..+|.+||++..+...+
T Consensus 195 ~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 195 LVGIPPFHGETPEEIFQNILNGK-IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HhCCCCCCCCCHHHHHHHHhcCC-cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 35889998888877777776644 3445554 99999999999999999999995554443
No 167
>KOG0201|consensus
Probab=98.56 E-value=4.3e-08 Score=57.77 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=48.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|+.||.++++..++..|-....|..-..+++.+.+++..|+..+|..||+..+++++
T Consensus 206 ~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 206 KGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 6999999999977766665555444445789999999999999999999999999763
No 168
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.54 E-value=1.9e-07 Score=50.90 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=41.5
Q ss_pred CcCCCCCCCCHHHHHHHHHcC-CCCC---CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKG-YQME---APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g-~r~~---~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+..+....+... .... .+...+.++.+++.+||..+|..||++.+|+.
T Consensus 199 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 199 ELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 688899888766544444332 2222 23345778999999999999999999999874
No 169
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.54 E-value=4.5e-07 Score=50.76 Aligned_cols=58 Identities=12% Similarity=0.168 Sum_probs=42.7
Q ss_pred CCcCCCCCCCCHHHHHHHH-HcCCC-CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHV-EKGYQ-MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v-~~g~r-~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+.......+ ..+.. ...+...+..+.+++.+||..+|.+||++.+++.
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 3688999877665333223 33332 2235678899999999999999999999999986
No 170
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.54 E-value=2.2e-07 Score=51.49 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=40.1
Q ss_pred CcCCCCCCCCHH-HHHHHHHcCCCCCCC----CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLA-DVVKHVEKGYQMEAP----EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~-~i~~~v~~g~r~~~p----~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||...... +....+..+..+..+ ..++.++.+++..||..+|.+||++.+|+..
T Consensus 205 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 205 TGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 588898776521 222233333322222 2478999999999999999999999999763
No 171
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.52 E-value=3.6e-07 Score=50.25 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=41.3
Q ss_pred CcCCCCCCCCHHHHHHHHH-cCCCCCCC----CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVE-KGYQMEAP----EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~-~g~r~~~p----~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||......+....+. ....+..+ ..++.++.+++..||..+|.+||++.+++.+
T Consensus 207 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 207 AGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred hCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 5788887766554443332 22333333 2468899999999999999999999998753
No 172
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.52 E-value=6.3e-07 Score=47.92 Aligned_cols=57 Identities=19% Similarity=0.226 Sum_probs=42.6
Q ss_pred CcCCCCCC-CCHHHHHHHHHcCCCCCCCCC--CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSD-EPLADVVKHVEKGYQMEAPEG--CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~-~~~~~i~~~v~~g~r~~~p~~--~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.. .....+...+..+.....+.. ++.++.+++..||..+|.+||++.+++.
T Consensus 181 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 181 TGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred hCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 47788877 444455555555554433322 8899999999999999999999999875
No 173
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.51 E-value=3.9e-07 Score=51.53 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=46.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF-----RQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~-----~~i~~ 58 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++.+||..+|.+||+. .+++.
T Consensus 190 ~~G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 190 LAGQSPFEGDDEDELFQSILEDE-VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred hhCCCCCCCCCHHHHHHHHHcCC-CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 46899999888777777666554 34567889999999999999999999998 77654
No 174
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.51 E-value=4e-07 Score=51.73 Aligned_cols=57 Identities=9% Similarity=0.079 Sum_probs=47.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-----FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-----~~~i~~ 58 (69)
++|..||.+.+..++...+..+. +..|..++..+.+++..||..+|.+|++ +.+++.
T Consensus 209 ltg~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 209 IAGYPPFFDDTPFRIYEKILAGR-LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HcCCCCCCCCCHHHHHHHHhcCC-cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 36899999988888887777764 5667789999999999999999999986 677764
No 175
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.50 E-value=1e-07 Score=52.31 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=39.1
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCC---CCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEA---PEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~---p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+..+....+ .....++. +...+.++.+++..||..+|.+||++.+|+..
T Consensus 204 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 204 ELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred hCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 467787666554322222 22222221 23467899999999999999999999998864
No 176
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.50 E-value=1.5e-07 Score=52.64 Aligned_cols=57 Identities=9% Similarity=0.073 Sum_probs=41.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQM--EAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~--~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+..+....+..+..+ ..|...+..+.+++.+||..+|.+||++.+++.
T Consensus 210 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 210 EGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred hCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 578888776554332223222222 245678899999999999999999999999986
No 177
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.50 E-value=4.3e-07 Score=49.24 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=43.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
+|..||...+..++...+.. .....|...+.++.+++..||..+|.+||++.+
T Consensus 188 ~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 188 TGKPPFYAEDRKEIYEKILK-DPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 58889988776666666655 446677788999999999999999999999943
No 178
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.49 E-value=4.1e-07 Score=50.23 Aligned_cols=29 Identities=10% Similarity=0.248 Sum_probs=26.1
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++..||..+|.+||++.+++.
T Consensus 254 ~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 254 NISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 45788999999999999999999999875
No 179
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.49 E-value=5.3e-07 Score=48.74 Aligned_cols=57 Identities=21% Similarity=0.235 Sum_probs=43.5
Q ss_pred CcCCCCCCCCH-HHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPL-ADVVKHVEK-GYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~-~~i~~~v~~-g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||..... ......+.. +.....|...+.++.+++..||..+|.+||++.+++.
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 198 TGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred hCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 57888887762 233444433 3445567788999999999999999999999999875
No 180
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.47 E-value=4.3e-07 Score=49.60 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=41.7
Q ss_pred CCcCCCCCCCCH---HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH--HHHH
Q psy925 1 MNRAEMSSDEPL---ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF--RQLK 57 (69)
Q Consensus 1 ~~g~~Py~~~~~---~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~--~~i~ 57 (69)
++|..||...+. .++...... .....|..++.++.+++.+||..+|.+||++ .+++
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 193 LRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 358899988774 333333222 4455677889999999999999999999999 6554
No 181
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.47 E-value=2.3e-07 Score=51.88 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=41.2
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+.+..+.+..+..+..+. .+...+..+.+++..||..+|.+||++.+++..
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 210 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred hCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 5788888776543333333232222 234567899999999999999999999999864
No 182
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.45 E-value=4e-07 Score=51.34 Aligned_cols=53 Identities=13% Similarity=0.245 Sum_probs=43.0
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++.+||..+|.+|+++.
T Consensus 187 ~tg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~~~~ 239 (312)
T cd05585 187 LTGLPPFYDENVNEMYRKILQEP-LRFPDGFDRDAKDLLIGLLSRDPTRRLGYN 239 (312)
T ss_pred HhCCCCcCCCCHHHHHHHHHcCC-CCCCCcCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 46899999988877777665543 455678999999999999999999998653
No 183
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.44 E-value=1.1e-06 Score=49.21 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=44.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+....... .....+..+.+++..||..+|.+||++.+++..
T Consensus 212 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 212 IDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 35889998887766665555443322 223578899999999999999999999999864
No 184
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.43 E-value=8.1e-07 Score=49.64 Aligned_cols=58 Identities=10% Similarity=0.084 Sum_probs=47.8
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-----FRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-----~~~i~~~ 59 (69)
++|..||.+.+..++...+..+. +..|...+..+.+++.+||..+|.+|++ +.+++.+
T Consensus 192 ~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 192 LVGYPPFFDDNPFGIYEKILAGK-LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCC-cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 46899999988888887776664 4567778999999999999999999995 7777643
No 185
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.42 E-value=7e-07 Score=49.06 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=43.7
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH----HHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF----RQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~----~~i~~ 58 (69)
+|..||...+..+....+..+. ...|...++.+.+++.+||..+|.+||++ .+++.
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 217 TGKPPFRGSNEYLTFQKILKLE-YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred hCCCCCCCccHHHHHHHHHhcC-CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 5888998877665555554433 34567789999999999999999999999 77664
No 186
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.42 E-value=1.4e-06 Score=49.17 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=43.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++..||..+|.+||+..
T Consensus 192 ~tg~~p~~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~l~~~P~~R~~a~ 244 (318)
T cd05582 192 LTGSLPFQGKDRKETMTMILKAK-LGMPQFLSPEAQSLLRALFKRNPANRLGAG 244 (318)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 46899999988777777665554 345778899999999999999999999943
No 187
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.41 E-value=1.3e-06 Score=49.53 Aligned_cols=57 Identities=16% Similarity=0.277 Sum_probs=47.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+..+....+..+. ...|..++.++.+++.+||..+|.+|+ +..+++.
T Consensus 194 l~G~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 194 LTGAPPFTAENRKKTIDKILKGK-LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 46899999988777777776664 456778899999999999999999999 6777654
No 188
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.41 E-value=1.3e-06 Score=48.19 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=40.7
Q ss_pred CcCCCCCCCCH-HHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPL-ADVVKHVEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~-~~i~~~v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||..... .+....+..+..+..| ..++.++.+++..||..+|.+||++.+++.
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 202 TGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred hCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 57888875432 2223333444444443 457899999999999999999999999975
No 189
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.40 E-value=6.7e-07 Score=48.89 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=40.9
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQM---EAPEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~---~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
+|..||...+..++...+..+... ..+..++.++.+++.+||..+|++||+..
T Consensus 188 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 243 (260)
T cd05611 188 FGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGAN 243 (260)
T ss_pred HCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCC
Confidence 588999988877777666554321 22346899999999999999999999554
No 190
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.40 E-value=1e-06 Score=48.55 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++.+||..+|.+||++.+++.
T Consensus 250 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 250 NASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 46789999999999999999999999875
No 191
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.40 E-value=1.6e-06 Score=49.15 Aligned_cols=57 Identities=16% Similarity=0.167 Sum_probs=45.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++.+||..+|.+|| +..+++.
T Consensus 195 ~~G~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 195 LVGESPFPGDDEEEVFDSIVNDE-VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 36899999988877777776654 345678899999999999999999999 4555544
No 192
>KOG4645|consensus
Probab=98.39 E-value=4.6e-07 Score=59.22 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=52.8
Q ss_pred CCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|.-||..+++. +|..+|..|..|..|..++.+=.+++..|+..||..|-+..||+.
T Consensus 1435 ~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1435 ATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 5799999999775 999999999999999999999999999999999999987777664
No 193
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.39 E-value=2e-06 Score=47.88 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=38.9
Q ss_pred CcCCCCCCC-----CHHHHHHHHHcCCCCCCC------CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDE-----PLADVVKHVEKGYQMEAP------EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~-----~~~~i~~~v~~g~r~~~p------~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||... ...+....+.+...+..+ ...++++.+++..||..+|.+||++.+++.
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 198 QNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 577888755 223444444443322222 124578999999999999999999999986
No 194
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.39 E-value=1.1e-06 Score=48.86 Aligned_cols=57 Identities=7% Similarity=0.053 Sum_probs=40.9
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCC--------------------------CCCCCHHHHHHHHHhccCCCCCCCCHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEA--------------------------PEGCPPEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~--------------------------p~~~~~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
+|..||.+.+..+.+..+.++...+. .+.++..+.+++.+|+..+|.+||+..+
T Consensus 204 ~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 283 (290)
T cd07862 204 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 283 (290)
T ss_pred cCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence 58889988876655554433211110 1246778899999999999999999999
Q ss_pred HHH
Q psy925 56 LKA 58 (69)
Q Consensus 56 i~~ 58 (69)
++.
T Consensus 284 ~l~ 286 (290)
T cd07862 284 ALS 286 (290)
T ss_pred Hhc
Confidence 875
No 195
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.39 E-value=1.4e-06 Score=49.37 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=46.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++..||..+|.+|+ +..+++.
T Consensus 189 ltg~~Pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 189 MCGRLPFYNQDHEKLFELILMEE-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 46899999887777666665553 455778999999999999999999999 7888764
No 196
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.38 E-value=2.1e-06 Score=48.46 Aligned_cols=57 Identities=11% Similarity=0.053 Sum_probs=42.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEA-PEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~-p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+.......+..+..+.. ...++..+.+++..||+.+|.+||++.+++.
T Consensus 215 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 215 ERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred hCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 57888888766544444444333322 3457788999999999999999999999875
No 197
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.36 E-value=1.8e-06 Score=48.91 Aligned_cols=57 Identities=12% Similarity=0.087 Sum_probs=46.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-------CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-------TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-------~~~~i~~ 58 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++..|+..+|.+|+ +..+++.
T Consensus 190 ~tg~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 190 MAGQPPFEADNEDDLFESILHDD-VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 46899999998888887777665 344667899999999999999999999 6666654
No 198
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.35 E-value=1.8e-06 Score=48.82 Aligned_cols=55 Identities=9% Similarity=0.114 Sum_probs=45.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH-HH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR-QL 56 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~-~i 56 (69)
++|..||.+.+..++...+... ++..|..++.++.+++..||..+|.+|+++. ++
T Consensus 190 l~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 190 LIGQSPFHGEDEDELFDSILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred HhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHH
Confidence 3689999998887777766544 4556778999999999999999999999875 44
No 199
>KOG0588|consensus
Probab=98.35 E-value=1.8e-06 Score=53.59 Aligned_cols=58 Identities=17% Similarity=0.311 Sum_probs=52.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|+.||.+-+...++.+|++|.. ..|..++.+..+|+.+.+..||.+|-+..+|.++
T Consensus 206 LtG~LPFdDdNir~LLlKV~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 206 LTGKLPFDDDNIRVLLLKVQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HhCCCCCCCccHHHHHHHHHcCcc-cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 479999999888899999999973 5679999999999999999999999999999875
No 200
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.35 E-value=2.9e-06 Score=47.54 Aligned_cols=58 Identities=14% Similarity=0.155 Sum_probs=44.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+....+....+..+.... ....++.++.+++..||..+|.+||++.+++.
T Consensus 210 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 210 VDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 35888998877666655555443322 33567899999999999999999999999876
No 201
>KOG0578|consensus
Probab=98.34 E-value=1.7e-06 Score=52.32 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=48.3
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.|+.||-.-++...++.+....++. .|..++.++.+++..|+..|+..|++..+++.
T Consensus 464 eGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 464 EGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 4999999888877777775544444 57889999999999999999999999999976
No 202
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.33 E-value=1.5e-06 Score=49.24 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.++.+++..||..+|.+||++.+++.
T Consensus 279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 279 FSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 4678999999999999999999999975
No 203
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.33 E-value=1.5e-06 Score=49.27 Aligned_cols=52 Identities=10% Similarity=0.107 Sum_probs=43.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++..|+..+|.+|++.
T Consensus 190 ~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 190 LCGHAPFEAENEDDLFEAILNDE-VVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred hhCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 36899999998888887776654 34567789999999999999999999997
No 204
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.32 E-value=1.9e-06 Score=47.47 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.++|..||..+|.+||++.+++.
T Consensus 251 ~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 251 NASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 46789999999999999999999999875
No 205
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.32 E-value=4.1e-06 Score=46.99 Aligned_cols=58 Identities=10% Similarity=0.178 Sum_probs=43.3
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||...+..+....+..... ...+...+.++.+++..||..+|.+||++.+++..
T Consensus 212 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 212 DGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred hCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 58889887776655555543321 12234678899999999999999999999999873
No 206
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.31 E-value=2.8e-06 Score=48.42 Aligned_cols=29 Identities=17% Similarity=0.195 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++.+||..+|.+||++.+++.
T Consensus 270 ~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 270 VFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred CcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 35788999999999999999999999975
No 207
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.31 E-value=2.2e-06 Score=48.55 Aligned_cols=56 Identities=9% Similarity=0.126 Sum_probs=45.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH-HHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR-QLK 57 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~-~i~ 57 (69)
++|..||.+.+..++...+..+. +..|..++.++.+++.+||..+|.+|+++. ++.
T Consensus 190 ~~G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 190 LIGQSPFHGHDEEELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 36899999988888777776554 345667899999999999999999999997 554
No 208
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.30 E-value=1.2e-06 Score=48.72 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=41.1
Q ss_pred CCcCCCCCCCCHHHH----HHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADV----VKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i----~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+.... ...+.. .....+...+..+.+++..||..+|.+|| ++.+++.
T Consensus 195 ~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 195 IEGKSPFRQRKEKVKREEVERRVKE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HHCCCCCCCCchhhHHHHHHHHhhh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 358899988765322 222332 23344567899999999999999999999 7778754
No 209
>KOG0575|consensus
Probab=98.29 E-value=2.8e-06 Score=51.83 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=49.9
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.|..||...+..+.+..|..... ..|..++.+-.+||...++.+|.+||+..+|+..
T Consensus 213 ~G~PPFetk~vkety~~Ik~~~Y-~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 213 VGRPPFETKTVKETYNKIKLNEY-SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred hCCCCcccchHHHHHHHHHhcCc-ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 59999999999999999976653 3467899999999999999999999999999863
No 210
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.28 E-value=2.3e-06 Score=48.73 Aligned_cols=58 Identities=7% Similarity=0.056 Sum_probs=46.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~~ 59 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++.+||..+|.+|+ +..+++.+
T Consensus 189 ltG~~Pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 189 MCGRLPFYNQDHEKLFELILMED-IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred hhCCCCCCCCCHHHHHHHhccCC-ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 46899999888777766665443 345778999999999999999999997 78888753
No 211
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.27 E-value=2.7e-06 Score=47.25 Aligned_cols=60 Identities=10% Similarity=0.079 Sum_probs=42.3
Q ss_pred CcCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 2 NRAEMSSDEP----LADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 2 ~g~~Py~~~~----~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
+|..||.... ..++...+..+. .+.|..++.++++++.+||..+|.+||++.++...|+.
T Consensus 203 tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 203 TGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred hCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 5788885432 223333343333 45567789999999999999999999998877665543
No 212
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.27 E-value=4.4e-06 Score=47.45 Aligned_cols=58 Identities=12% Similarity=0.028 Sum_probs=45.2
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp----~~~~i~~ 58 (69)
++|..||.+.+..++...+..+........++.++.+++..||..+|.+|| +..+++.
T Consensus 191 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 191 CCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 468999999888887777776653333346789999999999999999998 4666554
No 213
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.27 E-value=3.5e-06 Score=47.69 Aligned_cols=55 Identities=7% Similarity=0.108 Sum_probs=44.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH-HHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR-QLK 57 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~-~i~ 57 (69)
+|..||.+.+..++...+..+. +..|..++.++.+++..||..+|.+|++.. ++.
T Consensus 191 ~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 191 IGQSPFHGDDEDELFESIRVDT-PHYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred hCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 5899999888877777766554 445677899999999999999999999974 554
No 214
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.26 E-value=3.3e-06 Score=47.89 Aligned_cols=57 Identities=11% Similarity=0.116 Sum_probs=46.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+..++...+..+. ...|..+++++.+++..||..+|.+|+ +..+++.
T Consensus 190 ~tG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 190 MCGRLPFYNQDHEKLFELILMEE-IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ccCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 46899999888777766665543 445678899999999999999999996 8888865
No 215
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.26 E-value=4.2e-06 Score=47.82 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..+.++.+++..||..+|.+||++.+++.+
T Consensus 268 ~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 268 KASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 467789999999999999999999999853
No 216
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.25 E-value=3.6e-06 Score=48.12 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++.+||..+|.+||++.+++.
T Consensus 269 ~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 269 GANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred cCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 35789999999999999999999999875
No 217
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.25 E-value=4.4e-06 Score=46.21 Aligned_cols=30 Identities=7% Similarity=0.147 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
...+.++.+++.+||..+|.+||++.+++.
T Consensus 250 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 250 PNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 456788999999999999999999999875
No 218
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.23 E-value=2.6e-06 Score=47.26 Aligned_cols=29 Identities=17% Similarity=0.060 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++.+|+..+|.+||++++++.
T Consensus 255 ~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 255 ILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 36788999999999999999999999875
No 219
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.23 E-value=2.1e-06 Score=47.61 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=39.1
Q ss_pred CCcCCCCCCCCH----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 1 MNRAEMSSDEPL----ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 1 ~~g~~Py~~~~~----~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
++|..||.+... .++......+........++.++.+++.+||..+|.+||++.++.
T Consensus 188 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 188 VAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred HhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence 358889976532 233333333332223356899999999999999999999996654
No 220
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.23 E-value=3.8e-06 Score=47.54 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++.+||..+|.+||++.+++.
T Consensus 261 ~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 261 NADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 46788999999999999999999999985
No 221
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.23 E-value=5.6e-06 Score=47.13 Aligned_cols=45 Identities=13% Similarity=0.198 Sum_probs=34.5
Q ss_pred HHHHHHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 15 VVKHVEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 15 i~~~v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
....+....++..+ ...+.++.+++.+||..+|.+||++.+++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 256 LLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred HHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 33344445555544 3578999999999999999999999999764
No 222
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.22 E-value=4.5e-06 Score=46.17 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++.+||..+|.+||++.+++.
T Consensus 252 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 252 PLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred cCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 46788999999999999999999999875
No 223
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.22 E-value=5.5e-06 Score=46.14 Aligned_cols=57 Identities=12% Similarity=0.196 Sum_probs=44.2
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+..+....+..+. ...|...+..+.+++.+||..+|.+|+ +.++++.
T Consensus 192 ~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 192 LAGYPPFFDDNPIQIYEKILEGK-VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HhCCCCCCCCCHHHHHHHHhcCC-ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 36889998887666665555443 456778899999999999999999999 6666653
No 224
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.21 E-value=6.2e-06 Score=46.40 Aligned_cols=58 Identities=9% Similarity=0.111 Sum_probs=41.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHhccCCCCCCCC----HHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPEGCPPEEYEMMRQAWSLQPELRPT----FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~----~~~i~~ 58 (69)
++|..||.+.+..+....+... ...+.....+.++.+++..||..+|.+||+ ..+++.
T Consensus 226 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 226 LYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 3688999888776555444332 222222337899999999999999999999 777665
No 225
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.21 E-value=8.6e-06 Score=46.08 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=27.1
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..+.++.+++..||..+|.+||++.+++..
T Consensus 260 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 260 GASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 367889999999999999999999999863
No 226
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.20 E-value=3.4e-06 Score=47.91 Aligned_cols=57 Identities=11% Similarity=0.104 Sum_probs=45.0
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.+.+..+....+..+. ...|..++.++.+++..||..+|.+|+ +..+++.
T Consensus 189 l~g~~Pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 189 MCGRLPFYNQDHERLFELILMEE-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HhCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 36889998887776666655443 345678899999999999999999998 7777764
No 227
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.20 E-value=7.3e-06 Score=46.59 Aligned_cols=59 Identities=7% Similarity=0.076 Sum_probs=44.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCC-CCCCCC------CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGY-QMEAPE------GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~-r~~~p~------~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..++...+.... ....|. .++.++.+++..||..+|.+||++.+++.+
T Consensus 192 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 192 LCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred hhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 36899999988877766664432 122221 468999999999999999999999998854
No 228
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.19 E-value=6e-06 Score=46.04 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++..+.+++..||..+|.+||++.+++.
T Consensus 270 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 270 FIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 46889999999999999999999999875
No 229
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.19 E-value=9.1e-06 Score=44.61 Aligned_cols=57 Identities=14% Similarity=0.074 Sum_probs=38.5
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCC---CCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEA---PEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~---p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||............ .....++. ...++..+.+++.+||..+|.+||++.+|+.
T Consensus 204 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 204 ELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 577788766554333322 22222221 1246788999999999999999999998875
No 230
>KOG0983|consensus
Probab=98.19 E-value=7.1e-06 Score=46.87 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=46.5
Q ss_pred CcCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA-DVVKHVEKGYQMEAP--EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~-~i~~~v~~g~r~~~p--~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||++.+.+ +++..|.+...+..| ...++.+.+++..|+..++.+||...+++.
T Consensus 289 Tg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 289 TGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 689999997654 788888775544444 348999999999999999999999999875
No 231
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.19 E-value=8.2e-06 Score=45.37 Aligned_cols=29 Identities=14% Similarity=0.307 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.++|..||..+|.+||++.+++.
T Consensus 262 ~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 262 DLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 47888999999999999999999999875
No 232
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.19 E-value=6.2e-06 Score=46.81 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=26.1
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++..||..+|.+||++.+++.
T Consensus 279 ~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 279 TFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 45678999999999999999999999974
No 233
>KOG0591|consensus
Probab=98.18 E-value=9e-06 Score=46.53 Aligned_cols=53 Identities=21% Similarity=0.291 Sum_probs=46.6
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHH
Q psy925 4 AEMSSDEPLADVVKHVEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQL 56 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i 56 (69)
..||.|-+..++...|.+|..++.| ...+.++..||..|...+++.||+...+
T Consensus 225 ~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~ 278 (375)
T KOG0591|consen 225 QSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPY 278 (375)
T ss_pred CCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchH
Confidence 6799999888999999999888888 6789999999999999999999984333
No 234
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.18 E-value=8.7e-06 Score=44.60 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=41.2
Q ss_pred CcCCCCCCCCHH---HHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA---DVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~---~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...... .....+ ..+..+..|...+.++.+++..||..+|.+||++.+++.
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 203 TAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 578888654432 222222 223445566778999999999999999999999999875
No 235
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.17 E-value=6.8e-06 Score=45.45 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=27.0
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.++..+.+++..||..+|.+||++.+|+.
T Consensus 253 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 253 PKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 356889999999999999999999999875
No 236
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.17 E-value=4.6e-06 Score=47.28 Aligned_cols=52 Identities=10% Similarity=0.125 Sum_probs=43.4
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++.+||..+|.+|++.
T Consensus 195 ltG~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 195 LAGQPPFDGEDEDELFQSIMEHN-VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 36899999988887777776554 44567889999999999999999999976
No 237
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.17 E-value=8.3e-06 Score=46.81 Aligned_cols=58 Identities=10% Similarity=-0.006 Sum_probs=47.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~~ 59 (69)
++|..||.+.+...+...+..+.. ..|..++.++.+++.+|+..+|.+|+ ++++++.+
T Consensus 222 l~G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 222 LVGCPPFYANEPLLIYQKILEGII-YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred hcCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 468999999887777777777753 45678899999999999999999995 78887653
No 238
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.16 E-value=3.3e-06 Score=47.08 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=40.3
Q ss_pred CCcCCCCCCCCHH---HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy925 1 MNRAEMSSDEPLA---DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-----FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~---~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-----~~~i~~ 58 (69)
++|..||.+.... +....+........+..++.++.+++..||..+|.+|++ +.+++.
T Consensus 195 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 195 IAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3688999875432 222222222223345678999999999999999999999 777765
No 239
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.16 E-value=8.2e-06 Score=45.46 Aligned_cols=57 Identities=9% Similarity=-0.034 Sum_probs=40.9
Q ss_pred CCcCCCCCCCCHHHHHHHH----HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHV----EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-----FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v----~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-----~~~i~~ 58 (69)
++|..||.+.........+ ..+. ...+..++.++.+++..||..+|.+||+ +.+++.
T Consensus 195 ~~g~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 195 IEGQSPFRGRKEKVKREEVDRRVLETE-EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhhhccc-cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 3688999887664333333 2222 2345678899999999999999999999 666654
No 240
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.16 E-value=1.1e-05 Score=45.75 Aligned_cols=57 Identities=7% Similarity=0.086 Sum_probs=44.2
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCC-CCCC--CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQ-MEAP--EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r-~~~p--~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++|..||.+.+..+....+..+.+ ...| ..++.++.+|+..|+. +|.+|+++.+++.
T Consensus 203 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 203 IYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 368999998887777766655433 2223 3578999999999997 9999999999874
No 241
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.15 E-value=7.7e-06 Score=45.34 Aligned_cols=58 Identities=10% Similarity=-0.014 Sum_probs=38.8
Q ss_pred CcCCCCCCCCH-------HHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPL-------ADVVKHVEKGYQMEA-PEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~-------~~i~~~v~~g~r~~~-p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||..... .+....+........ ....+.++.+++.+||..+|.+||++.+++..
T Consensus 188 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 188 LGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred hCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 57888865322 122333333322222 23578899999999999999999999998753
No 242
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.14 E-value=9.4e-06 Score=44.89 Aligned_cols=30 Identities=7% Similarity=0.181 Sum_probs=26.9
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..++.++.+++.+||..+|.+||++.+++.
T Consensus 252 ~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 252 KNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 347889999999999999999999999875
No 243
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.13 E-value=7.1e-06 Score=46.21 Aligned_cols=30 Identities=13% Similarity=0.276 Sum_probs=27.1
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.++.++.+++.+||..+|++||++.+++..
T Consensus 258 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 258 AFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 367889999999999999999999999864
No 244
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.13 E-value=1.6e-05 Score=43.92 Aligned_cols=27 Identities=26% Similarity=0.486 Sum_probs=25.1
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.++.+++.+||..+|.+||++.+++.
T Consensus 253 ~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 253 SPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 678999999999999999999999875
No 245
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.12 E-value=1.8e-05 Score=44.43 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=24.4
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.++.+++..||..+|.+||++.+++.
T Consensus 268 ~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 268 SEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 357889999999999999999999976
No 246
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.12 E-value=1.3e-05 Score=44.21 Aligned_cols=28 Identities=18% Similarity=0.322 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++.++.+++..||..+|.+||++.+++.
T Consensus 256 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 256 IDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3889999999999999999999999875
No 247
>KOG0582|consensus
Probab=98.11 E-value=1.3e-05 Score=47.95 Aligned_cols=57 Identities=18% Similarity=0.076 Sum_probs=44.5
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC-----C----CCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME-----A----PEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~-----~----p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||..+.+.+++-.-.+|..+. . -...+..++.++..|+..||.+||+.+++++
T Consensus 227 ~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 227 HGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 6999999999988775544454321 1 1336778999999999999999999999875
No 248
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.11 E-value=1.5e-05 Score=45.44 Aligned_cols=58 Identities=14% Similarity=0.260 Sum_probs=44.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-HHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEK---GYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-FRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~---g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-~~~i~~~ 59 (69)
++|..||.+.+..+....+.. ....+....++.++.+++..|+. +|.+|++ +.+++.+
T Consensus 224 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 224 LYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 468999999887776666644 22232223469999999999997 9999999 9998753
No 249
>KOG1023|consensus
Probab=98.11 E-value=1.2e-05 Score=48.46 Aligned_cols=63 Identities=29% Similarity=0.452 Sum_probs=46.8
Q ss_pred cCCCCCCC----CHHHHHHHHHc-CCCCCCCC-----CCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDE----PLADVVKHVEK-GYQMEAPE-----GCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~----~~~~i~~~v~~-g~r~~~p~-----~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
.+.||... ...+++..|.. |..+.+|. ..++++..++..||..+|..||+++.|...+..+..
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 45566542 33478888877 55445553 355689999999999999999999999988877655
No 250
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.11 E-value=1.2e-05 Score=44.13 Aligned_cols=56 Identities=9% Similarity=0.143 Sum_probs=41.8
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.+.......+ ..+..+..|...+..+.+++.+||. +|..||++.+|+.
T Consensus 204 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 204 TEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred hCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 588999887665444333 3334455667778889999999994 8999999999875
No 251
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.11 E-value=1.3e-05 Score=44.67 Aligned_cols=29 Identities=21% Similarity=0.367 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++.+||..+|.+||++.+++.
T Consensus 253 ~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 253 AASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 45788999999999999999999999986
No 252
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.10 E-value=7e-06 Score=46.73 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..+.++.+++.+||..+|.+||++.+++..
T Consensus 263 ~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 263 NADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred ccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 357789999999999999999999998864
No 253
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.10 E-value=1.9e-05 Score=45.19 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++..||..+|.+||++.+++.
T Consensus 271 ~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 271 GVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 56788999999999999999999999874
No 254
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.10 E-value=1.7e-05 Score=45.17 Aligned_cols=30 Identities=10% Similarity=0.252 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.++.++.+++..||..+|.+||++.+++..
T Consensus 266 ~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 266 KASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 378899999999999999999999999863
No 255
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.09 E-value=1.1e-05 Score=45.36 Aligned_cols=29 Identities=10% Similarity=0.114 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.+.+..++|..|+..+|.+||++.+++.+
T Consensus 262 ~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 262 LSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 47788999999999999999999998853
No 256
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.09 E-value=9.2e-06 Score=48.16 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=27.7
Q ss_pred CCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 28 PEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 28 p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
|...+.++.+|+..||..+|.+|++..+++.
T Consensus 320 p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 320 PKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred ccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 4457889999999999999999999999874
No 257
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.09 E-value=9.4e-06 Score=45.64 Aligned_cols=29 Identities=10% Similarity=0.098 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.+..+++.+|+..+|.+|++..+++.
T Consensus 257 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 257 RLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 46788999999999999999999999875
No 258
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.09 E-value=7e-06 Score=45.74 Aligned_cols=56 Identities=16% Similarity=0.089 Sum_probs=40.1
Q ss_pred CcCCCCCCCCHHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy925 2 NRAEMSSDEPLAD----VVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-----FRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~----i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-----~~~i~~ 58 (69)
+|..||.+.+... +...+..+ ....+...+.++.+|+..||..+|.+|++ +++++.
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 196 QGQSPFRKRKERVKREEVDRRVKED-QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred hCCCCCCCCCcchhHHHHHHHhhcc-cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 5889998765432 22222222 23445678999999999999999999997 677765
No 259
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.08 E-value=1.5e-05 Score=44.05 Aligned_cols=30 Identities=13% Similarity=0.283 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..+.++.+++.+|+..+|.+||++++++.+
T Consensus 253 ~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 253 DASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 457899999999999999999999998753
No 260
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.07 E-value=1.2e-05 Score=51.99 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=42.2
Q ss_pred CcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||...... +++..+..+..++ ....+.++.+||..||..+|.+||++.+++.
T Consensus 238 TGk~PF~~~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 238 SGKTPFHKANNFSQLISELKRGPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HCCCCCCcCCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 588999766543 4555555553332 2457899999999999999999999999874
No 261
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.06 E-value=1.7e-05 Score=44.44 Aligned_cols=29 Identities=7% Similarity=0.077 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++.+|+..+|.+||++.+++.
T Consensus 257 ~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 257 RLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 46888999999999999999999999875
No 262
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.06 E-value=1.6e-05 Score=44.23 Aligned_cols=28 Identities=7% Similarity=0.221 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+..+.+++..||..+|++||++.+++.
T Consensus 262 ~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 262 LSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CChHHHHHHHHHhccCccccCCHHHHhc
Confidence 5888999999999999999999999875
No 263
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.05 E-value=2.2e-05 Score=43.15 Aligned_cols=56 Identities=13% Similarity=0.169 Sum_probs=43.2
Q ss_pred CcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+....+.+..+ ..+.++..|...+.++.+++..||. ++..||+..+++.
T Consensus 204 ~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 204 TEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred hCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 588999887665444333 3445566788899999999999998 5799999998765
No 264
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.05 E-value=1.3e-05 Score=44.26 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++..||..+|.+||++.+++.
T Consensus 252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 252 HADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 45778899999999999999999999874
No 265
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.03 E-value=2e-05 Score=44.70 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=43.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
++|..||.+.+..++...+..+. ...|...+.++.+++.+|+..+|.+|++.
T Consensus 195 ltg~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 195 LAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 36899999998888877776654 34567889999999999999999999984
No 266
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.03 E-value=2.3e-05 Score=44.53 Aligned_cols=29 Identities=10% Similarity=0.226 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++..||..+|.+||++.+++.
T Consensus 284 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 284 NASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 45788999999999999999999999875
No 267
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.03 E-value=2.2e-05 Score=44.56 Aligned_cols=53 Identities=4% Similarity=-0.041 Sum_probs=42.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
++|..||.+.+..++...+..+. ...+...+.++.+++.+|+..+|.+||+..
T Consensus 190 l~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 190 LYGLPPFYSRDTAEMYDNILNKP-LRLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 36899999988877777776554 334556799999999999999999999864
No 268
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.03 E-value=1.5e-05 Score=45.44 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=28.1
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+.++.++.+++.+||..+|.+||++.+++.+
T Consensus 261 ~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 261 PHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred ccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 4578899999999999999999999999865
No 269
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.02 E-value=1.1e-05 Score=44.89 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=39.7
Q ss_pred CcCCCCCCCCHH--HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 2 NRAEMSSDEPLA--DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~--~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
+|..||.+.... ..............|..++.++.+++..||..+|.+|+ ++++++.
T Consensus 191 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 191 RGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred hCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 588898765322 22222222233445677899999999999999999999 5887765
No 270
>KOG0583|consensus
Probab=98.00 E-value=4.6e-05 Score=44.65 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=48.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGC-PPEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~-~~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
+.|..||.+.+.......+..|. ...|..+ +.+...|+.+|+..+|..|++..+|+
T Consensus 217 l~G~~PF~d~~~~~l~~ki~~~~-~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 217 LCGRLPFDDSNVPNLYRKIRKGE-FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HhCCCCCCCccHHHHHHHHhcCC-ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 36999999987777777777775 4557777 99999999999999999999999998
No 271
>KOG0584|consensus
Probab=98.00 E-value=1.3e-05 Score=49.33 Aligned_cols=56 Identities=18% Similarity=0.145 Sum_probs=47.5
Q ss_pred CcCCCCCCC-CHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDE-PLADVVKHVEKGYQME-APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~-~~~~i~~~v~~g~r~~-~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+++.||..- ++.+|+.+|..|..|. ....-.+++.++|.+|+.. ..+|++..+++.
T Consensus 238 T~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 238 TSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 589999755 5579999999998765 3455688999999999998 999999999885
No 272
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.99 E-value=2.4e-05 Score=43.31 Aligned_cols=53 Identities=15% Similarity=0.184 Sum_probs=35.8
Q ss_pred CcCCCCCCCCH----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHH
Q psy925 2 NRAEMSSDEPL----ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 2 ~g~~Py~~~~~----~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
+|..||.+... .++...+. ......|...+.++.+++.+||..+|.+||++.+
T Consensus 189 ~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 189 AGRSPFRQRKEKVEKEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred hCCCCCCCCcccccHHHHHhccc-cccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 57888876543 22222221 2233445678999999999999999999995444
No 273
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.98 E-value=2e-05 Score=43.62 Aligned_cols=29 Identities=7% Similarity=0.060 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++..||..+|.+||++.+++.
T Consensus 252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 252 KLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 46788999999999999999999999875
No 274
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.97 E-value=3.5e-05 Score=43.81 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=40.9
Q ss_pred CCcCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEP----LADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~----~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.... ..++...+... .+..|..++..+.+++.+||..+|.+|+ +..+++.
T Consensus 201 ltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 201 LTGASPFTLEGERNTQSEVSRRILKC-DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred hcCCCCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 46889996432 22344444333 3456678899999999999999999999 6777764
No 275
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.97 E-value=4.5e-05 Score=44.10 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=26.9
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
...+.++.+++.+|+..+|.+||++.+++.
T Consensus 258 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 258 SQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 346789999999999999999999999875
No 276
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.97 E-value=2.6e-05 Score=43.10 Aligned_cols=28 Identities=11% Similarity=0.188 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+..+.+++..||..+|.+||++.+++.
T Consensus 256 ~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 256 ICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 4567789999999999999999999874
No 277
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.97 E-value=2.1e-05 Score=48.90 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=45.8
Q ss_pred CcCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGY--QMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~--r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+|..||.+....++...+..+. .+.....++.++.+++..||..+|.+||++.+++.+
T Consensus 575 tG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h 634 (669)
T cd05610 575 TGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH 634 (669)
T ss_pred HCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence 5889999988887777664432 222334678899999999999999999999999864
No 278
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=97.96 E-value=3.2e-05 Score=42.59 Aligned_cols=28 Identities=14% Similarity=0.288 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.++.+++..||..+|.+||++.+++.
T Consensus 251 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 251 LDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 4778999999999999999999999875
No 279
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.94 E-value=4e-05 Score=42.79 Aligned_cols=29 Identities=3% Similarity=0.013 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.+..+++.+|+..+|.+|+++++++.
T Consensus 256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 256 RLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 45778999999999999999999999875
No 280
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.93 E-value=4.3e-05 Score=43.52 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++..||+.+|.+||++.+++.
T Consensus 265 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 265 KASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 46889999999999999999999999876
No 281
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.93 E-value=2.1e-05 Score=44.62 Aligned_cols=54 Identities=4% Similarity=-0.025 Sum_probs=42.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
++|..||.+.+..+....+..+. ...+..++.++.+++.+|+..+|.+|++..+
T Consensus 190 ~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 190 LYGLPPFYSRNTAEMYDNILNKP-LQLKPNITNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred hcCCCCCCCCCHHHHHHHHHhCC-cCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 36899999988877776665543 3345578999999999999999999998763
No 282
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.92 E-value=3.8e-05 Score=43.68 Aligned_cols=52 Identities=10% Similarity=0.125 Sum_probs=43.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
++|..||.+.+..++...+..+. ...|..++.++.+++.+||..+|.+|++.
T Consensus 195 ltG~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 195 LAGQPPFDGEDEDELFQSIMEHN-VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 36899999988887777776554 34567889999999999999999999974
No 283
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.92 E-value=2.7e-05 Score=44.34 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=38.9
Q ss_pred CCcCCCCCCCC--------HH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC------HHHHHH
Q psy925 1 MNRAEMSSDEP--------LA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT------FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~--------~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~------~~~i~~ 58 (69)
++|..||.... .. .+.+.+..+ ....|..++.++.+++..|+..+|.+|++ +.+++.
T Consensus 190 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 190 MAGRSPFDIVGMSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHCCCCcccccccccccccchHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 35888886321 11 223333333 34567788999999999999999999987 566653
No 284
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.90 E-value=2e-05 Score=43.60 Aligned_cols=57 Identities=4% Similarity=0.100 Sum_probs=39.3
Q ss_pred CcCCCCCCCCHHHHH-HHH-H-cCCCCCCCCCCCHHHHHHHHHhccCCCCCCCC-HHHHHH
Q psy925 2 NRAEMSSDEPLADVV-KHV-E-KGYQMEAPEGCPPEEYEMMRQAWSLQPELRPT-FRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~-~~v-~-~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~-~~~i~~ 58 (69)
+|..||.+.....+. ..+ . .......++.++..+.+++..||+.+|.+|++ +++++.
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 201 TGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 588899865443221 111 1 12333445678999999999999999999995 688874
No 285
>KOG4279|consensus
Probab=97.90 E-value=1.9e-05 Score=50.04 Aligned_cols=57 Identities=14% Similarity=0.103 Sum_probs=45.9
Q ss_pred CcCCCCCCCCH-HHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPL-ADVVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~-~~i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||-.+.. +.....| .-..-|++|..++.+-.++|.+|+..+|.+||+..+++.
T Consensus 773 TGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 773 TGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 59999988854 4445555 333447788999999999999999999999999999874
No 286
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.89 E-value=3.9e-05 Score=43.77 Aligned_cols=52 Identities=10% Similarity=0.047 Sum_probs=36.0
Q ss_pred CCcCCCCCCCC--------H-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDEP--------L-ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~~--------~-~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
++|..||.... . ..+...+.. .....|..++.++.+++.+||..+|.+|++.
T Consensus 190 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 190 MAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred hhCCCCCccCCCcCCcccccHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 46888985321 1 122333333 3345677889999999999999999999983
No 287
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.85 E-value=6.5e-05 Score=41.98 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
...++.+++..|+..+|.+||+..+++.
T Consensus 280 ~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 280 LGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 4467889999999999999999998864
No 288
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.85 E-value=4.6e-05 Score=43.38 Aligned_cols=53 Identities=11% Similarity=-0.004 Sum_probs=36.4
Q ss_pred CCcCCCCCCC------CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDE------PLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~------~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
++|..||... ...+....+........|..++..+.+++.+|+..+|.+|++.
T Consensus 190 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 190 MAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 3688899532 2222332222233344677889999999999999999999973
No 289
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.85 E-value=8.3e-05 Score=41.44 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++.+|+..+|.+||++.+++.
T Consensus 255 ~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 255 TLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 46788999999999999999999999885
No 290
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.84 E-value=3.9e-05 Score=44.19 Aligned_cols=28 Identities=4% Similarity=0.146 Sum_probs=24.9
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+.++.+++.+|+..+|.+||+..+++.+
T Consensus 291 ~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 291 ASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred cHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 4578899999999999999999998763
No 291
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.83 E-value=7e-05 Score=42.99 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+..+.+++.+||..+|.+||++.+++.
T Consensus 283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 283 KASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred chhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 4667899999999999999999999985
No 292
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.83 E-value=4.1e-05 Score=43.50 Aligned_cols=53 Identities=6% Similarity=0.043 Sum_probs=42.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
++|..||.+.+..++...+..+. +..+...+.++.+++.+|+..+|.+||+..
T Consensus 190 ~~G~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 190 LYGLPPFYCRDVAEMYDNILHKP-LVLRPGASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCC-ccCCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence 36899999988888777776654 333456889999999999999999999775
No 293
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.82 E-value=2e-05 Score=43.56 Aligned_cols=29 Identities=14% Similarity=0.292 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++..||..+|++||++++++.
T Consensus 256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 256 KVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 45889999999999999999999999874
No 294
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.80 E-value=8.3e-05 Score=42.77 Aligned_cols=29 Identities=7% Similarity=0.215 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.+.++.+++.+||..+|.+||++.+++.+
T Consensus 287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 287 KTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred cchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 46788999999999999999999999863
No 295
>KOG0589|consensus
Probab=97.78 E-value=0.00015 Score=43.26 Aligned_cols=56 Identities=14% Similarity=0.273 Sum_probs=50.4
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 4 AEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+.+|.+.+..+.+..+.++...+.|...+.++..+|..|++.+|..||+..+++..
T Consensus 203 k~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 203 KPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 56788888888888898888788899999999999999999999999999999864
No 296
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.78 E-value=9.5e-05 Score=41.10 Aligned_cols=56 Identities=11% Similarity=0.124 Sum_probs=41.4
Q ss_pred CcCCCCCCCCH---HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 2 NRAEMSSDEPL---ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~---~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
+|..||.+... .++. .......+..|..++.++.+++.+|+..+|.+|+ +..+++.
T Consensus 191 ~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 191 RGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hCCCCCCCCCccchHHHH-HHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 58889987632 2222 2223344556777899999999999999999999 8888875
No 297
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.78 E-value=0.0001 Score=42.03 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=27.0
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.++.++.++|.+||..+|.+||++.+++..
T Consensus 259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 259 NADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 467899999999999999999999998753
No 298
>KOG0580|consensus
Probab=97.78 E-value=0.00013 Score=40.93 Aligned_cols=57 Identities=9% Similarity=0.092 Sum_probs=48.2
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.|..||...+-.+.+..|..-. ...|..++.+..++|..|...+|.+|-...+++.+
T Consensus 217 vg~ppFes~~~~etYkrI~k~~-~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 217 VGLPPFESQSHSETYKRIRKVD-LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred hcCCchhhhhhHHHHHHHHHcc-ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 4889999998778887775543 45578999999999999999999999999998764
No 299
>KOG0615|consensus
Probab=97.78 E-value=4.4e-05 Score=45.43 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=48.8
Q ss_pred CCcCCCCCCCCHHH-HHHHHHcCCCCCCC---CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLAD-VVKHVEKGYQMEAP---EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~-i~~~v~~g~r~~~p---~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|-.||++..-.. ..+.|..|.....| ..++.+..++|...+..+|++||+..+.+.+
T Consensus 375 LsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 375 LSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred eccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 46899999876554 77888888766655 3578899999999999999999999998753
No 300
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.77 E-value=7.2e-05 Score=42.94 Aligned_cols=29 Identities=7% Similarity=0.190 Sum_probs=25.8
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.+.++.+++.+|+..+|.+||++.+++.+
T Consensus 283 ~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 283 KASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred cchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 35678999999999999999999999864
No 301
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.77 E-value=5.7e-05 Score=42.01 Aligned_cols=57 Identities=11% Similarity=0.157 Sum_probs=38.6
Q ss_pred CCcCCCCCCCCHH----HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEPLA----DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~----~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||...+.. ++...+..+ ....|..++.++.+++..||..+|.+|+ +.++++.
T Consensus 191 ~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 191 IAARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HhCCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 3588899765432 222222222 2334567899999999999999999999 4566654
No 302
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.76 E-value=0.00013 Score=41.32 Aligned_cols=53 Identities=6% Similarity=0.052 Sum_probs=42.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
++|..||.+.+..++...+..+. ...|...+.++.+++..|+..+|.+|++..
T Consensus 190 ~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 190 LYGLPPFYSRDVSQMYDNILHKP-LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred hcCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 36899999988777777665553 455677899999999999999999998653
No 303
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.76 E-value=4.1e-05 Score=48.97 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=29.3
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
++.+++..||..+|.+||++.++++.|..+..
T Consensus 922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 922 EVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 57789999999999999999999999998865
No 304
>KOG1989|consensus
Probab=97.76 E-value=3.8e-05 Score=48.36 Aligned_cols=60 Identities=12% Similarity=0.195 Sum_probs=45.1
Q ss_pred cCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 3 RAEMSSDEPLADVVKHVEKG-YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g-~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
+..||++..... |.+| +..|..+..+..+.+||..|+..+|++||++-+++..+..+...
T Consensus 254 ~t~PFe~sg~la----Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 254 FTTPFEESGKLA----ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred hCCCcCcCccee----EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 356777664432 3344 33333367899999999999999999999999999988877654
No 305
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.75 E-value=9.9e-05 Score=41.23 Aligned_cols=27 Identities=15% Similarity=0.247 Sum_probs=24.3
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+..+.+++..||..+|.+||++++++.
T Consensus 280 ~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 280 DPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 567789999999999999999999875
No 306
>KOG0592|consensus
Probab=97.73 E-value=0.00015 Score=44.48 Aligned_cols=57 Identities=19% Similarity=0.225 Sum_probs=49.6
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.|..||.+.+..-+.+.|..-. ..+|+..++.+.+|+.+-+..+|.+|.+..+|..+
T Consensus 282 aG~PPFra~NeyliFqkI~~l~-y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 282 AGQPPFRAANEYLIFQKIQALD-YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cCCCCCccccHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 5999999998888888887765 35678899999999999999999999999998753
No 307
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.73 E-value=0.00013 Score=40.46 Aligned_cols=29 Identities=7% Similarity=0.070 Sum_probs=26.1
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.++.+++.+|+..+|.+||++.+++.
T Consensus 256 ~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 256 EIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 46778899999999999999999999875
No 308
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.70 E-value=0.00022 Score=40.60 Aligned_cols=29 Identities=10% Similarity=0.289 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+..+.+++.+|+..+|.+||++.+++.
T Consensus 263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 263 NANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 35789999999999999999999999874
No 309
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.70 E-value=0.00017 Score=40.13 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=39.2
Q ss_pred CCcCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy925 1 MNRAEMSSDEP----LADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-----TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~----~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-----~~~~i~~ 58 (69)
++|..||.... ..++...+..+. ++.|..++..+.+++.+||..+|.+|+ +..+++.
T Consensus 202 l~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 202 LTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred hcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 36788886432 223333333333 445677899999999999999999997 6666654
No 310
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.70 E-value=5.8e-06 Score=44.99 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=36.8
Q ss_pred CcCCCCCCCCHH---HHHHHHHcCC-C--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA---DVVKHVEKGY-Q--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~---~i~~~v~~g~-r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+|..||.+.... .......... . .......+.++.+++..||+.+|.+||++.+++.
T Consensus 194 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 194 TGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 578888887433 2222221111 0 1111223489999999999999999999999875
No 311
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.69 E-value=8e-05 Score=42.52 Aligned_cols=29 Identities=14% Similarity=0.231 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.++.+.+++.+|+..+|.+||+..+++.+
T Consensus 270 ~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 270 ANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 45678899999999999999999999853
No 312
>KOG0033|consensus
Probab=97.67 E-value=0.00017 Score=40.86 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=47.9
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC-CCCC--CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ-MEAP--EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r-~~~p--~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.|..||.+.+...+++.|..|.. .+.| ++++++-.+|+.+.+..+|.+|-+..+.+.
T Consensus 207 ~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 207 VGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred hCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 58899999998999999988843 2222 578899999999999999999999988754
No 313
>KOG0579|consensus
Probab=97.62 E-value=0.00022 Score=45.17 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=48.7
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++.|...+++..|+-.|.....|. .|+.++..+.+++..|+..+|+.||+.++++.+
T Consensus 231 iEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 231 IEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 678999999988888886655433 588899999999999999999999999998753
No 314
>PTZ00284 protein kinase; Provisional
Probab=97.61 E-value=0.00012 Score=43.61 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=23.5
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.+||..|+..||.+||+.++++.
T Consensus 412 ~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 412 DLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 45679999999999999999999986
No 315
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.60 E-value=0.00032 Score=40.75 Aligned_cols=59 Identities=7% Similarity=0.086 Sum_probs=45.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQAWSLQPEL--RPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~cw~~~p~~--Rp~~~~i~~~ 59 (69)
++|..||.+.+.......+.++ ..+..|. .++.++.+++..|+..+|.+ |++..+++.+
T Consensus 241 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 241 LVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 3689999998877777766554 2333443 57999999999999988887 9999998753
No 316
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.56 E-value=0.0001 Score=42.28 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..+.++.+++..|+..+|.+||+..+++.+
T Consensus 271 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 271 GANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 357889999999999999999999998753
No 317
>KOG0596|consensus
Probab=97.56 E-value=9.4e-05 Score=45.58 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=40.5
Q ss_pred cCCCCCCCCHH-HHHHHHHc-CCCCCCCCCCCHH-HHHHHHHhccCCCCCCCCHHHHHH
Q psy925 3 RAEMSSDEPLA-DVVKHVEK-GYQMEAPEGCPPE-EYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 3 g~~Py~~~~~~-~i~~~v~~-g~r~~~p~~~~~~-~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
|+.||....+. .-+..|.+ +...+.|...+.. +.++|..|+..||.+||+..+++.
T Consensus 568 gktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 568 GKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 78899888654 33344433 4545555444433 899999999999999999999875
No 318
>KOG1006|consensus
Probab=97.55 E-value=0.00033 Score=40.11 Aligned_cols=57 Identities=11% Similarity=-0.021 Sum_probs=42.9
Q ss_pred CcCCCCCCCCHH-HHHHHHHcCCCCC--CCCC---CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA-DVVKHVEKGYQME--APEG---CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~-~i~~~v~~g~r~~--~p~~---~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
||..||.+++.- +-+..|..|..+. .+.. .+..+..+|..|+-.+-.+||++.++++
T Consensus 264 tG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 264 TGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 699999999762 2233455665433 3333 6889999999999999999999999864
No 319
>KOG2052|consensus
Probab=97.53 E-value=0.00027 Score=42.57 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=46.1
Q ss_pred CCCCCCCC-----HHHHHHHH-HcCCCCCCCCCCC-----HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 4 AEMSSDEP-----LADVVKHV-EKGYQMEAPEGCP-----PEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 4 ~~Py~~~~-----~~~i~~~v-~~g~r~~~p~~~~-----~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
..||-++- ..+...-| .+..||..|.-.. ..+..+|..||..+|..|-+.--|.+.|.++.+
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 57887662 23444444 4567888775432 368899999999999999999999999888874
No 320
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.45 E-value=0.0003 Score=39.54 Aligned_cols=28 Identities=7% Similarity=0.018 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.++.+++.+|+..+|.+|++..+++.
T Consensus 260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 260 YVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CChHHHHHHHHHhccCchhccCHHHHhc
Confidence 3467889999999999999999999875
No 321
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.43 E-value=0.00045 Score=39.65 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..++.++.+++.+|+..+|.+||++.+++.
T Consensus 268 ~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 268 PNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred cCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 357788999999999999999999999874
No 322
>KOG2345|consensus
Probab=97.41 E-value=8.3e-05 Score=41.93 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
-.++.+.+++..|++.+|..||+..+++..++.+.
T Consensus 267 ~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 267 RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 38999999999999999999999999999887653
No 323
>KOG0598|consensus
Probab=97.41 E-value=0.00047 Score=40.32 Aligned_cols=57 Identities=14% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCC----CCHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELR----PTFRQLK 57 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~R----p~~~~i~ 57 (69)
++|..||.+-+..++...|..+..+..|...+.+..+++.+.+..+|+.| -.+.+|.
T Consensus 219 L~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik 279 (357)
T KOG0598|consen 219 LTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIK 279 (357)
T ss_pred hhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhh
Confidence 36999999999899999998888777778899999999999999999999 4555554
No 324
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.33 E-value=0.0008 Score=43.74 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=41.4
Q ss_pred CcCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVE--KGYQMEAPEGCPPEEYEMMRQAWSLQPELRP-TFRQLKAKLLTFML 65 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~--~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp-~~~~i~~~l~~~~~ 65 (69)
+|..||.+....++..... ..........+|..+.+++.+||..+|.+|+ ++.++...+..+..
T Consensus 226 TG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 226 TLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred HCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 5788887755443332211 1111111246789999999999999999995 56667777766654
No 325
>KOG4717|consensus
Probab=97.31 E-value=0.00047 Score=42.75 Aligned_cols=56 Identities=7% Similarity=0.130 Sum_probs=49.2
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.|+.||..-+..+.+-+|.+.. ...|...+.+..+||...+..+|.+|.+.++|..
T Consensus 214 CGq~PFqeANDSETLTmImDCK-YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 214 CGQPPFQEANDSETLTMIMDCK-YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hCCCccccccchhhhhhhhccc-ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 5899999988888888887765 3557899999999999999999999999999864
No 326
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.28 E-value=0.00085 Score=37.37 Aligned_cols=27 Identities=19% Similarity=0.278 Sum_probs=24.5
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.++.+++.+|+..+|.+||++.+++.
T Consensus 261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 261 PPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 568899999999999999999999864
No 327
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.28 E-value=0.00023 Score=41.09 Aligned_cols=30 Identities=10% Similarity=0.265 Sum_probs=25.7
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.++.+..++|.+||..+|.+||++.+++.+
T Consensus 322 ~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 322 NLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred CCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 356677789999999999999999998763
No 328
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.23 E-value=0.0019 Score=37.65 Aligned_cols=59 Identities=12% Similarity=0.073 Sum_probs=41.8
Q ss_pred CCcCCCCCCCCHHHHHHHHHc-CCCCCCC--CCCCHHHHHHHHH--hccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEK-GYQMEAP--EGCPPEEYEMMRQ--AWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~-g~r~~~p--~~~~~~~~~l~~~--cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+.. ......| ..++.+..+++.+ |+..++..|+++.+++.+
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 242 LVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 468999998877655554533 2223333 3578999999987 666777789999998753
No 329
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.21 E-value=0.0016 Score=36.22 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=23.8
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+..+++.+|+..+|.+||++.+++.
T Consensus 262 ~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 262 PHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhHHHHHHHHhccCcccccCHHHHhc
Confidence 77889999999999999999998864
No 330
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.18 E-value=0.002 Score=37.12 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=42.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhccCCCCCCCC---HHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQAWSLQPELRPT---FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~cw~~~p~~Rp~---~~~i~~ 58 (69)
++|..||.+.+..+....+..+ .....|. .++.++.+++.+|+. +|.+|++ ..+++.
T Consensus 233 ~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 233 LVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 4689999998887777666543 2333333 468999999999996 8999998 777654
No 331
>KOG0577|consensus
Probab=97.17 E-value=0.0017 Score=41.00 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=47.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.|+.+++....+..|..+..|..+ ..++..+.+++..|++.-|.+||+.++++.
T Consensus 221 RkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 221 RKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred cCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 47899999988778888777666654 468889999999999999999999998865
No 332
>KOG0603|consensus
Probab=97.17 E-value=0.00061 Score=42.29 Aligned_cols=56 Identities=14% Similarity=0.268 Sum_probs=44.6
Q ss_pred CCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLA-DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~-~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||...... ++...+..|.. ...++.+-.+|++.+++.+|.+|+++.++...
T Consensus 507 L~G~tp~~~~P~~~ei~~~i~~~~~---s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 507 LTGRTLFAAHPAGIEIHTRIQMPKF---SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HhCCCccccCCchHHHHHhhcCCcc---ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 3688999887766 56655555532 36889999999999999999999999998753
No 333
>KOG0574|consensus
Probab=97.10 E-value=0.00013 Score=42.44 Aligned_cols=56 Identities=20% Similarity=0.110 Sum_probs=45.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
|..||.+.++...+.+|...-.+. .|..++.++.+++..|+-..|+.|.+..++..
T Consensus 225 G~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 225 GRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 899999999977666665443333 36778999999999999999999999888765
No 334
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.09 E-value=0.00079 Score=37.78 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.++.+++.+|+..+|.+||++.+++.
T Consensus 284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 284 KPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 45678999999999999999999999875
No 335
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.99 E-value=0.0042 Score=35.51 Aligned_cols=59 Identities=8% Similarity=0.116 Sum_probs=41.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCC---CCCCHHHHHHHHHhccC--CCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAP---EGCPPEEYEMMRQAWSL--QPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p---~~~~~~~~~l~~~cw~~--~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+... .+...| ..++.++.+++.+|+.. ++..|+++.+++.+
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 202 LYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred hcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 4689999998887777766543 333333 46799999999998754 44447888888754
No 336
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.93 E-value=0.00066 Score=36.94 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=24.0
Q ss_pred CCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 27 APEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 27 ~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
.|..++..+.+++.+||..+|.+|++.
T Consensus 197 ~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 197 IPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 456678899999999999999999985
No 337
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=96.90 E-value=0.0049 Score=35.68 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=41.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHH--hccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQ--AWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~--cw~~~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+..+ ..+..|. .++.+..+++.+ |...++..||++.+|+.+
T Consensus 230 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 230 LIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 3689999998888877777653 2333333 467888999876 444455678999998763
No 338
>KOG0032|consensus
Probab=96.90 E-value=0.0077 Score=35.77 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=48.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQME---APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~---~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+.|..||.+.+..+....|..|.... .=+..+....+++..+...+|..|.+..+++.+
T Consensus 232 L~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 232 LSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred hhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 35889999999888888888874311 114578999999999999999999999998874
No 339
>KOG0694|consensus
Probab=96.90 E-value=0.004 Score=39.28 Aligned_cols=52 Identities=15% Similarity=0.118 Sum_probs=43.4
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
|.|+.||+|.+-+++...|..-.. .-|..++.+..+||.+.+..+|++|=-.
T Consensus 562 L~Gq~PF~gddEee~FdsI~~d~~-~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 562 LVGESPFPGDDEEEVFDSIVNDEV-RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HcCCCCCCCCCHHHHHHHHhcCCC-CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 469999999999999988866542 2367899999999999999999999544
No 340
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.88 E-value=0.0036 Score=36.34 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=41.3
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhccCCCCCCC---CHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAP--EGCPPEEYEMMRQAWSLQPELRP---TFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p--~~~~~~~~~l~~~cw~~~p~~Rp---~~~~i~~ 58 (69)
++|..||.+.+..+....+... .....| ..++.+..+++.+++ .+|.+|+ +..+++.
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 4689999998877666555443 222222 468899999999876 4999999 8888764
No 341
>PHA03211 serine/threonine kinase US3; Provisional
Probab=96.86 E-value=0.001 Score=40.13 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.+.++.+|+.+|+..+|.+||++.+++.+
T Consensus 427 ~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 427 LDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 34578999999999999999999999864
No 342
>KOG0593|consensus
Probab=96.84 E-value=0.0056 Score=35.83 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+..+.+++.+|+..||++|.+.++++.
T Consensus 255 ~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 255 KISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 35667889999999999999999999874
No 343
>KOG0587|consensus
Probab=96.81 E-value=0.0011 Score=42.79 Aligned_cols=57 Identities=12% Similarity=0.113 Sum_probs=47.7
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.|..|+.++.+...+..|.+.-+ +..|..++.++.++|..|+..+-..||+..+++.
T Consensus 223 dG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 223 EGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 48999999999877777755543 3357889999999999999999999999998764
No 344
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=96.77 E-value=0.0081 Score=35.08 Aligned_cols=59 Identities=8% Similarity=0.063 Sum_probs=42.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhccCCCC--CCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQAWSLQPE--LRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~cw~~~p~--~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+..+ ..+..|. .++....+++..|+...+. .|++..+++.+
T Consensus 241 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 241 LVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 3689999988877666666543 3344444 4688999999999975443 38899998764
No 345
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.77 E-value=0.008 Score=35.09 Aligned_cols=59 Identities=8% Similarity=0.061 Sum_probs=42.4
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHhccCCCC--CCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGY-QMEAP--EGCPPEEYEMMRQAWSLQPE--LRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~-r~~~p--~~~~~~~~~l~~~cw~~~p~--~Rp~~~~i~~~ 59 (69)
++|..||.+.+.......+..+. .+..| ...+.+..+++..|+...+. .|+++.+|+.+
T Consensus 241 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 241 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 36899999888777777775542 23333 46899999999999974333 37888888764
No 346
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.73 E-value=0.0012 Score=38.85 Aligned_cols=28 Identities=14% Similarity=0.208 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.++.+|+.+|+..+|.+||+..+++.
T Consensus 348 ~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 348 LPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 4678999999999999999999999985
No 347
>KOG0614|consensus
Probab=96.70 E-value=0.0025 Score=39.55 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=45.2
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGY-QMEAPEGCPPEEYEMMRQAWSLQPELRPT 52 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~-r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~ 52 (69)
|+|..||.+.++...+..|..|. ...+|..++..-.+||.+....+|.+|--
T Consensus 613 L~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 613 LTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred HcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 58999999999999999998884 56788999999999999888899988754
No 348
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.67 E-value=0.0023 Score=36.13 Aligned_cols=27 Identities=15% Similarity=0.288 Sum_probs=24.3
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.+..+++.+|+..+|.+|+++++++.
T Consensus 287 ~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 287 DSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred ChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 456789999999999999999999875
No 349
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.66 E-value=0.002 Score=36.28 Aligned_cols=27 Identities=15% Similarity=0.249 Sum_probs=24.2
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+..+.+|+.+|+..+|.+||+..+++.
T Consensus 287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 287 DSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred ChHHHHHHHHHhccCcccccCHHHHhc
Confidence 456889999999999999999999875
No 350
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=96.65 E-value=0.0087 Score=34.26 Aligned_cols=58 Identities=9% Similarity=0.141 Sum_probs=39.8
Q ss_pred CCcCCCCCCCCHHHHHHHHHc-CCCCCCCC---CCCHHHHHHHHHhccCCCCC--CCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEK-GYQMEAPE---GCPPEEYEMMRQAWSLQPEL--RPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~-g~r~~~p~---~~~~~~~~l~~~cw~~~p~~--Rp~~~~i~~ 58 (69)
++|..||.+.+..+....+.. +.+.+.|. .++.++.+++.+|+...+.. |+++.+++.
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 202 LYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred hhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 368999998887776666644 34444443 46899999999998754433 457777654
No 351
>KOG0599|consensus
Probab=96.61 E-value=0.003 Score=36.57 Aligned_cols=58 Identities=9% Similarity=0.040 Sum_probs=43.2
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAP---EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p---~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.|..||-+-...-.+.+|.+|..-... .+.+.+..+||.+|+..+|.+|-+.++.+.+
T Consensus 223 aGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 223 AGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred cCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 467777654333445677888643332 4678899999999999999999999998753
No 352
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.60 E-value=0.012 Score=34.06 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=40.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhccCCCCCCCC---HHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQAWSLQPELRPT---FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~cw~~~p~~Rp~---~~~i~~ 58 (69)
++|..||.+.+..+....+... .....|. ..+.+..+++.++. .+|.+|++ +.+++.
T Consensus 230 ~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 230 LIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 4699999999888777777553 2333333 36889999998765 48888885 566553
No 353
>KOG0616|consensus
Probab=96.56 E-value=0.0057 Score=35.57 Aligned_cols=48 Identities=8% Similarity=0.152 Sum_probs=43.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCC
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELR 50 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~R 50 (69)
.|..||.+.+..+++++|..|. ...|...+.++.+|+.+.++.|-.+|
T Consensus 236 aG~pPF~~~~~~~iY~KI~~~~-v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 236 AGYPPFYDDNPIQIYEKILEGK-VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cCCCCCcCCChHHHHHHHHhCc-ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 5899999999999999999987 56788999999999999999888877
No 354
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=96.56 E-value=0.0025 Score=33.10 Aligned_cols=27 Identities=26% Similarity=0.549 Sum_probs=24.4
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..+.+++..|+..+|.+||+..+++..
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 678899999999999999999998764
No 355
>PHA03207 serine/threonine kinase US3; Provisional
Probab=96.54 E-value=0.0026 Score=37.27 Aligned_cols=29 Identities=10% Similarity=0.222 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.+.++.++|..|+..+|.+||++.+++..
T Consensus 347 ~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 347 MHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 46788999999999999999999998863
No 356
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.54 E-value=0.0036 Score=39.93 Aligned_cols=27 Identities=22% Similarity=0.290 Sum_probs=23.8
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
......++..||..+|.+||++.+++.
T Consensus 238 ~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 238 WPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 456678999999999999999999975
No 357
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=96.48 E-value=0.02 Score=32.82 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=39.5
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCC---CCCCHHHHHHHHHhccC--CCCCCCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAP---EGCPPEEYEMMRQAWSL--QPELRPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p---~~~~~~~~~l~~~cw~~--~p~~Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+... .+...| ..++.++.+++..|+.. ++..|+++.+++.+
T Consensus 202 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 202 LYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred hhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 3689999988877666655432 222222 35789999999987643 44457888887653
No 358
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.47 E-value=0.014 Score=33.99 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=41.1
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhccCCCCC---CCCHHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQAWSLQPEL---RPTFRQLKAK 59 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~cw~~~p~~---Rp~~~~i~~~ 59 (69)
++|..||.+.+..+....+... ..+..|. .++.++.+++.+|+. +|.+ |++..+++.+
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 242 LIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 4689999988777666666443 3344443 578999999999997 5665 4688887653
No 359
>KOG0611|consensus
Probab=96.33 E-value=0.017 Score=35.34 Aligned_cols=55 Identities=16% Similarity=0.285 Sum_probs=43.5
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
|..||.|.+-..++..|.+|-.-.. ..|.+..-||.-.+..+|++|.++.+|..+
T Consensus 249 GtMPFDG~Dhk~lvrQIs~GaYrEP--~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 249 GTMPFDGRDHKRLVRQISRGAYREP--ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred cccccCCchHHHHHHHhhcccccCC--CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 7889999988888888888843332 336666788888899999999999998654
No 360
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=96.23 E-value=0.017 Score=33.64 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=39.0
Q ss_pred CCcCCCCCCCCHHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhccCCCCCCCC---HHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKG-YQMEAP--EGCPPEEYEMMRQAWSLQPELRPT---FRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g-~r~~~p--~~~~~~~~~l~~~cw~~~p~~Rp~---~~~i~~ 58 (69)
++|..||.+.+..+....+... .....| ...+.+..+++.++. .+|.+|++ ..+++.
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 242 LVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 4699999998877665555432 223333 457888899887754 58999987 777654
No 361
>KOG0610|consensus
Probab=96.17 E-value=0.014 Score=35.22 Aligned_cols=56 Identities=7% Similarity=0.105 Sum_probs=42.5
Q ss_pred CcCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhccCCCCCCCC----HHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEK-GYQMEAPEGCPPEEYEMMRQAWSLQPELRPT----FRQLK 57 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~-g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~----~~~i~ 57 (69)
-|.+||.|.++.+.+..|.. ..+-+.-+..+....+||.+.+-.||.+|-- ..+|.
T Consensus 330 yG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 330 YGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred hCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 48999999999888877633 3332222367889999999999999999987 55554
No 362
>KOG0661|consensus
Probab=96.05 E-value=0.0083 Score=36.76 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.++.+..++|..|...||.+||+..+.++.
T Consensus 262 ~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 262 NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 488999999999999999999999998763
No 363
>KOG3653|consensus
Probab=96.00 E-value=0.018 Score=35.38 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=44.1
Q ss_pred CCCCC---CCC--HHHHHHHH-HcCCCCCCCCCC-----CHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 4 AEMSS---DEP--LADVVKHV-EKGYQMEAPEGC-----PPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 4 ~~Py~---~~~--~~~i~~~v-~~g~r~~~p~~~-----~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+.||. |.+ ..++...| ....||.+|+.+ ..-+.+.++.||+.|++.|=+...+-.++..+.
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 45665 232 33555544 667888887543 346789999999999999999998888777664
No 364
>KOG0690|consensus
Probab=95.78 E-value=0.019 Score=34.15 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=41.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP 51 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp 51 (69)
|.|..||.+.+...+.+.|..+. +..|..++++...|+...+..+|.+|-
T Consensus 362 mCGRLPFyn~dh~kLFeLIl~ed-~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 362 MCGRLPFYNKDHEKLFELILMED-LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred HhccCcccccchhHHHHHHHhhh-ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 67999999988777777776554 456789999999999999999999873
No 365
>KOG0585|consensus
Probab=95.49 E-value=0.034 Score=34.39 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=44.8
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPE--GCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~--~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
|+.||.+..-.+....|.+.- +.+|. ...+++.+||.+.+..||..|-+..+|..+
T Consensus 315 G~~PF~~~~~~~l~~KIvn~p-L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 315 GQLPFFDDFELELFDKIVNDP-LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred ccCCcccchHHHHHHHHhcCc-ccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 889999987778777775432 44443 478999999999999999999999988654
No 366
>KOG1187|consensus
Probab=95.46 E-value=0.04 Score=32.53 Aligned_cols=30 Identities=23% Similarity=0.312 Sum_probs=25.4
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 35 EYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 35 ~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+..+...|.+.++.+||++.+++..|+.+.
T Consensus 324 ~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 324 LAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 557778999999999999999988885543
No 367
>PHA03210 serine/threonine kinase US3; Provisional
Probab=95.35 E-value=0.027 Score=34.37 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.++.+++.+|+..+|.+||+..+++.
T Consensus 426 ~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 426 LPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 5667788899999999999999999975
No 368
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=94.89 E-value=0.027 Score=35.05 Aligned_cols=26 Identities=12% Similarity=0.229 Sum_probs=23.0
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
..++|+..|+..+|.+||+..+++.+
T Consensus 425 ~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 425 AGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhCC
Confidence 45689999999999999999999763
No 369
>KOG0586|consensus
Probab=94.72 E-value=0.03 Score=35.11 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=45.9
Q ss_pred CcCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKG-YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g-~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.|..||.|.+..+....+..| +|. |-.++.+..+++.+.+-.+|.+|++.++|...
T Consensus 250 ~GsLPFDG~~lk~Lr~rvl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 250 EGSLPFDGQNLKELRPRVLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ecccccCCcccccccchheeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 488999998887777777666 444 45677888999999999999999999999764
No 370
>KOG0597|consensus
Probab=94.60 E-value=0.07 Score=33.96 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=45.6
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
|.|..||-..+..+.+..|.... ...|...+.+..+++..-+..||..|-+-.+++.
T Consensus 194 ~~G~PPF~a~si~~Lv~~I~~d~-v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 194 YVGQPPFYARSITQLVKSILKDP-VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred hcCCCCchHHHHHHHHHHHhcCC-CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 46899998888777777764433 2345689999999999999999999999888764
No 371
>KOG0605|consensus
Probab=94.49 E-value=0.096 Score=32.64 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=42.1
Q ss_pred CcCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhccCCCCCCCC---HHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKG-YQMEAPE--GCPPEEYEMMRQAWSLQPELRPT---FRQLK 57 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g-~r~~~p~--~~~~~~~~l~~~cw~~~p~~Rp~---~~~i~ 57 (69)
.|=.||.+.++.++...|.+. ..+.+|. .++.+.++||.+|+. +|.+|-- +.+|.
T Consensus 383 vGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 383 VGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 478999999999999988654 3455553 578899999999997 8888753 55554
No 372
>KOG0696|consensus
Probab=94.43 E-value=0.19 Score=31.10 Aligned_cols=49 Identities=10% Similarity=0.150 Sum_probs=39.7
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCC
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELR 50 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~R 50 (69)
|.|+.||.|.+-.++.+.|.+.. ..-|+.++.+..++...-+-..|.+|
T Consensus 544 laGQpPFdGeDE~elF~aI~ehn-vsyPKslSkEAv~ickg~ltK~P~kR 592 (683)
T KOG0696|consen 544 LAGQPPFDGEDEDELFQAIMEHN-VSYPKSLSKEAVAICKGLLTKHPGKR 592 (683)
T ss_pred HcCCCCCCCCCHHHHHHHHHHcc-CcCcccccHHHHHHHHHHhhcCCccc
Confidence 45999999999999999987654 23368889999999888888888776
No 373
>KOG1027|consensus
Probab=93.42 E-value=0.11 Score=34.02 Aligned_cols=52 Identities=17% Similarity=0.347 Sum_probs=35.9
Q ss_pred cCCCCCCCCHHHHHHHHHcCCC-CC--CC-CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQ-ME--AP-EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r-~~--~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
|..||.+.-..+ ..|..|.. +. .| ..+ +..+||...++.+|..||+..+++.
T Consensus 711 G~HpFGd~~~R~--~NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 711 GSHPFGDSLERQ--ANILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred CccCCCchHHhh--hhhhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 688998864433 23444432 21 11 222 7789999999999999999999864
No 374
>KOG0576|consensus
Probab=93.29 E-value=0.34 Score=31.46 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=42.3
Q ss_pred CCCCCCCCHHHHHHHH-HcCCCCCC---CCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 4 AEMSSDEPLADVVKHV-EKGYQMEA---PEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v-~~g~r~~~---p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.|-.++.+.++.... +.|+.++. +..+++.+.+++..|+..+|.+||+.+-++.
T Consensus 212 qpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 212 QPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 4566777777766655 66776663 3457889999999999999999999886654
No 375
>KOG0604|consensus
Probab=93.05 E-value=0.17 Score=29.97 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=41.3
Q ss_pred CcCCCCCCCCHH----HHHHHHHcCCCCCC-C--CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLA----DVVKHVEKGYQMEA-P--EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~----~i~~~v~~g~r~~~-p--~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.|=.||-.++-. .....|..|+.-.. | +..+++..++|...+..+|.+|-++.+++.
T Consensus 258 CGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 258 CGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 466777655332 44556777865332 2 346788999999999999999999999875
No 376
>KOG0595|consensus
Probab=92.71 E-value=0.31 Score=29.63 Aligned_cols=56 Identities=14% Similarity=0.147 Sum_probs=45.1
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQ--MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r--~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
+|..||...+..+....++.|.. +..+..++.+..+|+..-...++.+|-+|.+..
T Consensus 209 ~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~ 266 (429)
T KOG0595|consen 209 TGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFF 266 (429)
T ss_pred hCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence 69999999999999988877743 445666777878888888889998888887654
No 377
>KOG1035|consensus
Probab=92.38 E-value=0.54 Score=32.41 Aligned_cols=45 Identities=29% Similarity=0.374 Sum_probs=31.7
Q ss_pred HHHHHHHcCCCCCC---CCCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 14 DVVKHVEKGYQMEA---PEGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 14 ~i~~~v~~g~r~~~---p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++..+++|..+.. ...--+.-..+|....+.+|.+||+..+++.
T Consensus 823 ~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 823 SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 45566677765544 2222334478888899999999999999875
No 378
>KOG4158|consensus
Probab=91.73 E-value=0.55 Score=29.07 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=31.7
Q ss_pred CCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 24 QMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 24 r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
-+..|+.+|+.+.+++..-++.+|.+|++-...-..++
T Consensus 475 LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 475 LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 35678999999999999999999999999876554443
No 379
>KOG0660|consensus
Probab=91.60 E-value=0.93 Score=27.15 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=27.1
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.+++.-.+|+.+.+..+|.+|.|.++.+.
T Consensus 280 p~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 280 PNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 467888899999999999999999999875
No 380
>KOG0671|consensus
Probab=89.60 E-value=0.34 Score=29.30 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=23.7
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.++.+|+.+.+.+||.+|.++.|++.
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhc
Confidence 36889999999999999999999875
No 381
>KOG0659|consensus
Probab=89.02 E-value=0.53 Score=27.44 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=26.9
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+.++.+..+|+.+.|.++|.+|.+..+.++.
T Consensus 251 ~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 251 PAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 3467788999999999999999999998753
No 382
>KOG1151|consensus
Probab=88.54 E-value=1.1 Score=28.20 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=37.1
Q ss_pred cCCCCCCCCH-HHHHHH--HHcC---CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 3 RAEMSSDEPL-ADVVKH--VEKG---YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 3 g~~Py~~~~~-~~i~~~--v~~g---~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
|..||.+.-. +.|++. |... ..|+. +..+.+..++|.+|+.+.-++|-...++.
T Consensus 680 GrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 680 GRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred cCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 7899987644 355543 2111 22322 46788899999999999999888777664
No 383
>KOG1165|consensus
Probab=87.70 E-value=4.6 Score=24.66 Aligned_cols=64 Identities=13% Similarity=0.056 Sum_probs=48.0
Q ss_pred CcCCCCCCCCHH---HHHHHHHcCCCCCC----CCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 2 NRAEMSSDEPLA---DVVKHVEKGYQMEA----PEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 2 ~g~~Py~~~~~~---~i~~~v~~g~r~~~----p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
-|..||.|+... +-++.|-+..|... -...|.++...+.-.-+.+-.+-|..+.+...|..++.
T Consensus 231 RGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 231 RGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred cCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 489999999554 55566654444332 25678899999988888888999999999888887764
No 384
>KOG0606|consensus
Probab=86.48 E-value=1.4 Score=30.25 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=39.7
Q ss_pred CcCCCCCCCCHHHHHHHH--HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q psy925 2 NRAEMSSDEPLADVVKHV--EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP 51 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v--~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp 51 (69)
-|.+||.|-++.+++..| ....-+......+++.++++...++.+|..|-
T Consensus 253 VgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 253 VGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred eeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 378999999999888766 33455555566889999999999999998774
No 385
>KOG0667|consensus
Probab=82.98 E-value=1.2 Score=28.40 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=23.3
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+.+++.+|+..+|..|.+..+.+.
T Consensus 476 ~~F~dflk~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 476 KLFIDFLKRCLEWDPAERITPAQALN 501 (586)
T ss_pred HHHHHHHHHHhccCchhcCCHHHHhc
Confidence 46789999999999999999998875
No 386
>KOG0658|consensus
Probab=81.87 E-value=2.2 Score=25.70 Aligned_cols=30 Identities=17% Similarity=0.341 Sum_probs=26.6
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
...+++..+++.+++.++|.+|-+..+++.
T Consensus 276 ~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 276 KRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 457899999999999999999998888764
No 387
>KOG1167|consensus
Probab=80.88 E-value=2 Score=26.34 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=26.2
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+..+...+++..+|+..+|.+|-+.++.++
T Consensus 351 d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 351 DVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 445678999999999999999999998764
No 388
>KOG1163|consensus
Probab=78.64 E-value=11 Score=22.16 Aligned_cols=63 Identities=13% Similarity=0.064 Sum_probs=45.8
Q ss_pred cCCCCCCCCHH---HHHHHHHcCCCC-C---CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 3 RAEMSSDEPLA---DVVKHVEKGYQM-E---APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 3 g~~Py~~~~~~---~i~~~v~~g~r~-~---~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|..||.|+.+. +-++.|.+..-. + .-...|.+....+.-|-...-.+.|....+.+.+.-++-
T Consensus 217 G~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 217 GSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred CCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 88999999664 444555332211 1 136689999999999999999999999998877766553
No 389
>PF09164 VitD-bind_III: Vitamin D binding protein, domain III; InterPro: IPR015247 This domain is predominantly found in Vitamin D binding proteins, and adopts a multihelical structure. It is required for formation of an actin 'clamp', allowing the protein to bind to actin []. ; PDB: 1MA9_A 1KW2_A 1KXP_D 1J7E_A 1J78_A 1LOT_A.
Probab=74.13 E-value=1.3 Score=20.12 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=22.4
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q psy925 7 SSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMR 40 (69)
Q Consensus 7 y~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~ 40 (69)
|...+..+....+.+..+-..|+..+.++.+++.
T Consensus 6 Yse~tFtEyKKrL~e~l~~k~P~at~~~l~~lve 39 (68)
T PF09164_consen 6 YSENTFTEYKKRLAERLRAKLPDATPTELKELVE 39 (68)
T ss_dssp TTTS-HHHHHHHHHHHHHHH-TTS-HHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 6666777777777776666667788888877764
No 390
>KOG0590|consensus
Probab=69.48 E-value=6.4 Score=25.29 Aligned_cols=30 Identities=23% Similarity=0.256 Sum_probs=27.2
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+|.+...+|.+.++.+|.+|-++.+|+.
T Consensus 555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 555 SLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 457889999999999999999999999975
No 391
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=69.07 E-value=0.52 Score=14.09 Aligned_cols=7 Identities=14% Similarity=0.563 Sum_probs=4.3
Q ss_pred HHhccCC
Q psy925 40 RQAWSLQ 46 (69)
Q Consensus 40 ~~cw~~~ 46 (69)
..||+..
T Consensus 2 ~l~wqks 8 (12)
T PF08247_consen 2 ELCWQKS 8 (12)
T ss_pred ceeEeee
Confidence 4588654
No 392
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=68.09 E-value=7.8 Score=24.41 Aligned_cols=31 Identities=6% Similarity=0.040 Sum_probs=25.7
Q ss_pred CCCCHHHHHHHHHhccCCC---CCCCCHHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQP---ELRPTFRQLKAK 59 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p---~~Rp~~~~i~~~ 59 (69)
+..+...++++.+++..++ .+|.|..+++.+
T Consensus 467 d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 467 DRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred cccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 4578889999999998755 689999998753
No 393
>cd07439 FANCE_c-term Fanconi anemia complementation group E protein, C-terminal domain. Fanconi Anemia (FA) is an autosomal recessive disorder associated with increased susceptibility to various cancers, bone marrow failure, cardiac, renal, and limb malformations, and other characteristics. Cells are highly sensitive to DNA damaging agents. A multi-subunit protein complex, the FA core complex, is responsible for ubiquitination of the protein FANCD2 in response to DNA damage. This monoubiquitination results in a downstream effect on homology-directed DNA repair. FANCE is part of the FA core complex and its C-terminal domain, which is modeled here, has been shown to directly interact with FANCD2. The domain contains a five-fold repeat of a structural unit similar to ARM and HEAT repeats. FANCE appears conserved in metazoa and in plants.
Probab=65.69 E-value=1.8 Score=24.77 Aligned_cols=38 Identities=11% Similarity=0.134 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHhccC-CCCCCCCHHHHHHHHHHHHHhhc
Q psy925 31 CPPEEYEMMRQAWSL-QPELRPTFRQLKAKLLTFMLNSL 68 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~-~p~~Rp~~~~i~~~l~~~~~~~~ 68 (69)
...=+..+|++|+.. .+..|.++.+++...+.+.+.++
T Consensus 210 Fa~lll~~itky~~~~~~~~~~~L~~~~~~~~TflkKsi 248 (254)
T cd07439 210 FAKLLLAVITKYGPQMSPAHKQSLSEALERNKTFLKKSI 248 (254)
T ss_pred HHHHHHHHHHHccHhhcHHHHHHHHHHHHhcchHHHHHH
Confidence 455678999999998 99999999999998888877654
No 394
>KOG0669|consensus
Probab=65.67 E-value=12 Score=22.21 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
-..+-.+|+...+..||.+|+...+.+.+
T Consensus 287 kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 287 KDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CChhHHHHHHHHhccCcccCcchHhhhch
Confidence 35577899999999999999999887653
No 395
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=65.38 E-value=7.7 Score=17.28 Aligned_cols=43 Identities=12% Similarity=0.198 Sum_probs=29.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccC---CCCCCCCHHH
Q psy925 13 ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSL---QPELRPTFRQ 55 (69)
Q Consensus 13 ~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~---~p~~Rp~~~~ 55 (69)
.+|...+-.|......+.|...+..+-..||.. --...|.|..
T Consensus 14 ~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~ 59 (70)
T PF05617_consen 14 DEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKP 59 (70)
T ss_pred HHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccc
Confidence 367777766765555667778999999999976 2335555554
No 396
>KOG1164|consensus
Probab=64.05 E-value=26 Score=20.33 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=42.6
Q ss_pred CcCCCCCCCCHHHHHHHH---HcCCCCC-CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 2 NRAEMSSDEPLADVVKHV---EKGYQME-APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v---~~g~r~~-~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
.|..||.+.........+ ....... .....+.++..+...+-..+-..+|....+...+......
T Consensus 232 ~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 232 KGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred cCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 367899887653222222 1122111 2345677888888888789999999999998887766543
No 397
>KOG1266|consensus
Probab=62.53 E-value=0.9 Score=27.49 Aligned_cols=24 Identities=21% Similarity=0.203 Sum_probs=20.4
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q psy925 36 YEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 36 ~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
+.++..|..-+|.+||++..++.+
T Consensus 308 r~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 308 RGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred cCcCcccccCCCCCCcchhhhhcC
Confidence 467889999999999999987653
No 398
>PF14756 Pdase_C33_assoc: Peptidase_C33-associated domain
Probab=59.34 E-value=23 Score=18.13 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=25.3
Q ss_pred HHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 34 EEYEMMRQA-WSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 34 ~~~~l~~~c-w~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
.+.++|..| .+.+-.+|.+-+++..+++.++..
T Consensus 77 slcqvie~ccc~qnktnr~tpeeva~kidqYlrg 110 (147)
T PF14756_consen 77 SLCQVIEECCCSQNKTNRATPEEVAAKIDQYLRG 110 (147)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhc
Confidence 345667655 578888999999999988887643
No 399
>KOG1290|consensus
Probab=58.32 E-value=11 Score=24.14 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=22.8
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..++.+++.-.+..+|.+||+..+.+.
T Consensus 523 A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 523 AQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHHHHHHHHHHhcCccccccHHHHhc
Confidence 346778888889999999999998774
No 400
>KOG0600|consensus
Probab=56.13 E-value=20 Score=23.06 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=25.5
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
..+....+|+...+..+|++|.+..+.+.
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 46778899999999999999999998764
No 401
>KOG0594|consensus
Probab=51.70 E-value=16 Score=21.94 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=24.1
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
++..+++..++.++|.+|.|.+..+.+
T Consensus 276 ~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 276 PDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 478899999999999999999988764
No 402
>TIGR03643 conserved hypothetical protein TIGR03643. This model describes an uncharacterized bacterial protein family. Members average about 90 amino acids in length with several well-conserved uncommon amino acids (Trp, Met). The majority of species are marine bacteria. Few species have more than one copy, but Vibrio cholerae El Tor N16961 has three identical copies.
Probab=51.69 E-value=26 Score=16.29 Aligned_cols=20 Identities=25% Similarity=0.594 Sum_probs=14.5
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q psy925 36 YEMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 36 ~~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
-.+|...| ++|.+|+.|...
T Consensus 3 ~riIeMAw----eDRtpFeaI~~~ 22 (72)
T TIGR03643 3 DRIIEMAW----EDRTPFEAIEQQ 22 (72)
T ss_pred HHHHHHHH----ccCCCHHHHHHH
Confidence 45677777 578889988654
No 403
>PF13220 DUF4028: Protein of unknown function (DUF4028)
Probab=51.44 E-value=11 Score=16.49 Aligned_cols=16 Identities=25% Similarity=0.410 Sum_probs=11.7
Q ss_pred CCCCCCCCHHHHHHHH
Q psy925 45 LQPELRPTFRQLKAKL 60 (69)
Q Consensus 45 ~~p~~Rp~~~~i~~~l 60 (69)
.+-..||+|+++-..-
T Consensus 36 ~eelgrptfkevekdw 51 (65)
T PF13220_consen 36 NEELGRPTFKEVEKDW 51 (65)
T ss_pred hhhhCCCcHHHHHHHH
Confidence 4456899999986543
No 404
>PF09049 SNN_transmemb: Stannin transmembrane; InterPro: IPR015135 This region consists of a single highly hydrophobic transmembrane helix that transverses the lipid bilayer at a 20 degree angle with respect to the membrane normal. It contains a conserved cysteine residue (Cys32) that, together with Cys34 found in the stannin unstructured linker domain, constitutes the putative trimethyltin-binding site that resides at the end of the transmembrane domain close to the lipid/solvent interface []. ; PDB: 1ZZA_A.
Probab=50.17 E-value=17 Score=13.82 Aligned_cols=9 Identities=11% Similarity=0.372 Sum_probs=5.7
Q ss_pred HHHHHHHhc
Q psy925 35 EYEMMRQAW 43 (69)
Q Consensus 35 ~~~l~~~cw 43 (69)
+..+|..||
T Consensus 25 lg~licgcw 33 (33)
T PF09049_consen 25 LGALICGCW 33 (33)
T ss_dssp HHHHHHHHH
T ss_pred HhhhheecC
Confidence 445666776
No 405
>KOG0670|consensus
Probab=49.83 E-value=17 Score=23.78 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=21.7
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+.+|+..|+-.+|.+|-+..+.+.
T Consensus 721 ~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 721 QLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred HHHHHHHHHhccChhhcCCHHHHhc
Confidence 5778889999999999999988764
No 406
>cd05501 Bromo_SP100C_like Bromodomain, SP100C_like subfamily. The SP100C protein is a splice variant of SP100, a major component of PML-SP100 nuclear bodies (NBs), which are poorly understood. It is covalently modified by SUMO-1 and may play a role in processes at the chromatin level. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=49.72 E-value=33 Score=16.93 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 13 ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 13 ~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
..|...+..|... .+...-.++.-+..+|...+..+ .+......|...+..
T Consensus 44 ~tI~~kL~~~~Y~-s~~ef~~D~~Lif~N~~~yN~~~--~~~~~a~~L~~~Fek 94 (102)
T cd05501 44 NKVKERLNERVYH-TVEGFVRDMRLIFHNHKLFYKDD--DFGQVGITLEKKFEK 94 (102)
T ss_pred HHHHHHHcCCCCC-CHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHH
Confidence 3455556555432 23456668888889999998877 455555556555543
No 407
>PF02173 pKID: pKID domain; InterPro: IPR003102 The nuclear factor CREB activates transcription of target genes in part through direct interactions with the KIX domain of the coactivator CBP in a phosphorylation-dependent manner. CBP and P300 bind to the pKID (phosphorylated kinase-inducible-domain) domain of CREB [].; GO: 0005515 protein binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1KDX_B.
Probab=49.64 E-value=20 Score=14.75 Aligned_cols=15 Identities=27% Similarity=0.609 Sum_probs=11.3
Q ss_pred CCCCCHHHHHHHHHH
Q psy925 48 ELRPTFRQLKAKLLT 62 (69)
Q Consensus 48 ~~Rp~~~~i~~~l~~ 62 (69)
..||+..-|+..|..
T Consensus 17 sRRPSYRKIlndLs~ 31 (41)
T PF02173_consen 17 SRRPSYRKILNDLSS 31 (41)
T ss_dssp TTSTHHHHHHHHHHH
T ss_pred hhCchHHHHHHHhcc
Confidence 479999988877643
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=49.27 E-value=18 Score=18.93 Aligned_cols=25 Identities=12% Similarity=-0.096 Sum_probs=12.4
Q ss_pred CcCCCCCC-CCHH-HHHHHHHcCCCCC
Q psy925 2 NRAEMSSD-EPLA-DVVKHVEKGYQME 26 (69)
Q Consensus 2 ~g~~Py~~-~~~~-~i~~~v~~g~r~~ 26 (69)
+|..||.+ .++. ++.+.+..|..+.
T Consensus 195 ~g~~pf~~~~~~~~~~~~~~~~~~~~~ 221 (225)
T smart00221 195 WGPEPFSGEGEFTSLLSDVWSFGVPLL 221 (225)
T ss_pred HCCCCccccchhHHHHHHHHhcCCccc
Confidence 46666665 3333 4444555555333
No 409
>PRK10721 hypothetical protein; Provisional
Probab=49.05 E-value=22 Score=16.20 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=16.5
Q ss_pred CCCCCCHHHHHHHHHhccCC
Q psy925 27 APEGCPPEEYEMMRQAWSLQ 46 (69)
Q Consensus 27 ~p~~~~~~~~~l~~~cw~~~ 46 (69)
-|..|.+.+.+-|+.||-.+
T Consensus 45 dp~~~~EkiLEAIQ~aWieE 64 (66)
T PRK10721 45 DPQASNEKILEAILLVWLDE 64 (66)
T ss_pred CcccccHHHHHHHHHHHHHh
Confidence 46789999999999999543
No 410
>PF04468 PSP1: PSP1 C-terminal conserved region; InterPro: IPR007557 The yeast polymerase suppressor 1 (PSP1) protein partially suppresses mutations in DNA polymerases alpha and delta []. The C-terminal half of PSP1 contains a domain, which is also found in several hypothetical proteins from both eukaryotic and prokaryotic sources: Crithidia fasciculata RBP45 and RBP33, subunits of the cycling sequence binding protein (CSBP) II. RBP45 and RBP33 proteins bind specifically to the cycling sequences present in several mRNAs that accumulate periodically during the cell cycle. RBP45 and RBP33 are phosphoproteins, which are phosphorylated differentially during progression through the cell cycle. Hypothetical proteins with high sequence similarity have been identified in other kinetoplastid organisms []. Bacillus subtilis yaaT protein, which plays a significant role in phosphorelay during initiation of sporulation. It is possible that the yaaT protein is also related to DNA replication. The sequence of the yaaT protein is widely conserved in prokaryotes (bacteria and archaea), but the functions of the protein are unknown []. The actual biological significance of the PSP1 C-terminal domain has not yet been clearly established.
Probab=48.78 E-value=23 Score=16.81 Aligned_cols=23 Identities=26% Similarity=0.249 Sum_probs=18.6
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHh
Q psy925 44 SLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 44 ~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
-+..+.|+.|.++++.|...+..
T Consensus 59 yy~a~~rvDFR~Lvr~L~~~f~~ 81 (88)
T PF04468_consen 59 YYTAESRVDFRELVRDLAREFKT 81 (88)
T ss_pred EEEeCCcCcHHHHHHHHHHHhCc
Confidence 35688999999999998877653
No 411
>PF08403 AA_permease_N: Amino acid permease N-terminal; InterPro: IPR013612 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. These proteins appear to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found to the N terminus of the amino acid permease domain (IPR004841 from INTERPRO) in metazoan Na-K-Cl cotransporters.
Probab=48.61 E-value=24 Score=16.42 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=15.4
Q ss_pred hccCCCCCCCCHHHHHHHHHH
Q psy925 42 AWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 42 cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
-|...-..|||..++...++.
T Consensus 32 ~~~~~k~~RPSL~~Lh~~~~~ 52 (74)
T PF08403_consen 32 SPGGQKKSRPSLDELHSQLEK 52 (74)
T ss_pred ccCCcccCCCCHHHHHHHhhc
Confidence 344555689999999887765
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=46.21 E-value=16 Score=21.48 Aligned_cols=21 Identities=24% Similarity=0.256 Sum_probs=15.8
Q ss_pred CCCHHHHHHHHHhccCCCCCC
Q psy925 30 GCPPEEYEMMRQAWSLQPELR 50 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~R 50 (69)
.+|+.+..||...++.+|.+|
T Consensus 268 ~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 268 DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ---HHHHHHHHHHT-SSGGGS
T ss_pred CcCHHHHHHHHHHccCCcccC
Confidence 678999999999999999887
No 413
>PF12533 Neuro_bHLH: Neuronal helix-loop-helix transcription factor ; InterPro: IPR022575 This functionally uncharacterised domain is found in eukaryotes, and is approximately 80 amino acids in length. There is a single completely conserved residue W that may be functionally important. It is found in neurogenic differentiation factors which are essential for neurogenesis. It is found C-terminal to the helix-loop-helix DNA binding domain PF00010 from PFAM.
Probab=45.59 E-value=14 Score=18.88 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=18.9
Q ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCC
Q psy925 14 DVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPE 48 (69)
Q Consensus 14 ~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~ 48 (69)
+.++.+++|. +...-+|+..||+.+|.
T Consensus 8 ~fv~tLckGL--------SQpTTNLVAgcLQlnPr 34 (120)
T PF12533_consen 8 SFVQTLCKGL--------SQPTTNLVAGCLQLNPR 34 (120)
T ss_pred HHHHHHHccc--------CcchHHHHHHhhhcCch
Confidence 4455566665 33447899999999885
No 414
>PF09905 DUF2132: Uncharacterized conserved protein (DUF2132); InterPro: IPR018668 This entry contains proteins that have no known function. ; PDB: 2JVW_A.
Probab=44.56 E-value=33 Score=15.53 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=19.7
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH-HHhccCCCC
Q psy925 4 AEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMM-RQAWSLQPE 48 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~-~~cw~~~p~ 48 (69)
.-|..|.+...++..+.+-+. .+.+.+.| -+|+..+|.
T Consensus 3 nnPLHGvtLe~il~~Lv~~yG-------W~~L~~~i~i~CF~~~Ps 41 (64)
T PF09905_consen 3 NNPLHGVTLETILTELVEHYG-------WEELGERININCFKNNPS 41 (64)
T ss_dssp S-TTSS--HHHHHHHHHHHT--------HHHHHHHTTSSSTTSS--
T ss_pred CCCCcchhHHHHHHHHHHHhC-------HHHHHhhcccccCCCCCc
Confidence 347778888777766544443 34444444 378887775
No 415
>cd05496 Bromo_WDR9_II Bromodomain; WDR9 repeat II_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional regulator involved in chromatin remodeling and play a role in embryonic development. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=43.35 E-value=46 Score=16.81 Aligned_cols=52 Identities=13% Similarity=0.148 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 13 ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 13 ~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
..|...+..|... -+...-.++.-+..+|..+++..+...-.....|..++.
T Consensus 49 ~tIk~kL~~~~Y~-~~~ef~~D~~lif~Na~~yN~~~~s~i~~~a~~L~~~F~ 100 (119)
T cd05496 49 GTVKETLFGGNYD-DPMEFAKDVRLIFSNSKSYTPNKRSRIYSMTLRLSALFE 100 (119)
T ss_pred HHHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Confidence 3455556655432 234456678888889998887644444444444554443
No 416
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Probab=43.21 E-value=79 Score=19.68 Aligned_cols=38 Identities=13% Similarity=0.072 Sum_probs=29.7
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCC
Q psy925 11 PLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPEL 49 (69)
Q Consensus 11 ~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~ 49 (69)
+-+.+...+.+|..++ +...-+++++++.+-|...+.+
T Consensus 346 SGt~lR~~Lr~G~~PP-~~f~RPEV~~vl~k~~~~~~~~ 383 (397)
T COG2046 346 SGTKLREMLRAGVKPP-EEFSRPEVADVLRKSLFPYRLK 383 (397)
T ss_pred ccHHHHHHHHcCCCCC-cccccHHHHHHHHHhccccccc
Confidence 4567788889998765 4567889999999998877665
No 417
>COG4063 MtrA Tetrahydromethanopterin S-methyltransferase, subunit A [Coenzyme metabolism]
Probab=42.87 E-value=60 Score=18.27 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=29.0
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCC-C-CCCCCCHHHHHHHHHhccCCC
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQM-E-APEGCPPEEYEMMRQAWSLQP 47 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~-~-~p~~~~~~~~~l~~~cw~~~p 47 (69)
+|..||-..-+.+.+...++..-+ . ..-.-+.++...+..|...+|
T Consensus 108 ~GAIPyiENi~~eaveRfqqqvelvdlid~eD~~~I~~~v~ecv~kdp 155 (238)
T COG4063 108 TGAIPYIENIPDEAVERFQQQVELVDLIDVEDPDEITAKVEECVEKDP 155 (238)
T ss_pred cccchhhhcCCHHHHHHHHHHeeeehhcccCCHHHHHHHHHHHHhcCC
Confidence 478899766566555544432211 1 112346788999999999888
No 418
>PF08499 PDEase_I_N: 3'5'-cyclic nucleotide phosphodiesterase N-terminal; InterPro: IPR013706 The cyclic nucleotide phosphodiesterases (PDE) comprise a group of enzymes that degrade the phosphodiester bond in the second messenger molecules cAMP and cGMP. They are divided into 11 families. They regulate the localisation, duration and amplitude of cyclic nucleotide signalling within subcellular domains. PDEs are therefore important for signal transduction. PDE enzymes are often targets for pharmacological inhibition due to their unique tissue distribution, structural properties, and functional properties. Inhibitors include: Roflumilast for chronic obstructive pulmonary disease and asthma [], Sildenafil for erectile dysfunction [] and Cilostazol for peripheral arterial occlusive disease [], amongst others. Retinal 3',5'-cGMP phosphodiesterase is located in photoreceptor outer segments: it is light activated, playing a pivotal role in signal transduction. In rod cells, PDE is oligomeric, comprising an alpha-, a beta- and 2 gamma-subunits, while in cones, PDE is a homodimer of alpha chains, which are associated with several smaller subunits. Both rod and cone PDEs catalyse the hydrolysis of cAMP or cGMP to the corresponding nucleoside 5' monophosphates, both enzymes also binding cGMP with high affinity. The cGMP-binding sites are located in the N-terminal half of the protein sequence, while the catalytic core resides in the C-terminal portion. This domain is found to the N terminus of the calcium/calmodulin-dependent 3'5'-cyclic nucleotide phosphodiesterase domain (IPR002073 from INTERPRO).; GO: 0004114 3',5'-cyclic-nucleotide phosphodiesterase activity
Probab=42.81 E-value=34 Score=15.23 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=23.2
Q ss_pred CCCCCHHHHHHHHHhcc-----CCCCCCCCHHHHHHHHH
Q psy925 28 PEGCPPEEYEMMRQAWS-----LQPELRPTFRQLKAKLL 61 (69)
Q Consensus 28 p~~~~~~~~~l~~~cw~-----~~p~~Rp~~~~i~~~l~ 61 (69)
+..+|.++++=+..-+. ....+.|+|..|.....
T Consensus 14 ~dsvp~eVr~WLasTFtrq~~~~~~~ek~~frsV~~Avq 52 (59)
T PF08499_consen 14 SDSVPDEVRDWLASTFTRQVTRRRSEEKPKFRSVVHAVQ 52 (59)
T ss_pred cccCCHHHHHHHHHHHHhhhhccccccchhHHHHHHHHH
Confidence 46778887766654443 44578899998887654
No 419
>KOG0612|consensus
Probab=42.62 E-value=67 Score=23.18 Aligned_cols=57 Identities=9% Similarity=0.066 Sum_probs=39.3
Q ss_pred CcCCCCCCCCHHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcc--CCCCCCCCHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKG-YQMEAP--EGCPPEEYEMMRQAWS--LQPELRPTFRQLKA 58 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g-~r~~~p--~~~~~~~~~l~~~cw~--~~p~~Rp~~~~i~~ 58 (69)
-|.+||-.-+.-+.+..|.+- ..+.+| ..++.+..+||.+... ...-.|-...+|..
T Consensus 276 yG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 276 YGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCDREVRLGRNGIEDIKN 337 (1317)
T ss_pred cCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcChhhhcccccHHHHHh
Confidence 389999988888888888654 345556 4589999999986552 33334444777654
No 420
>PF08769 Spo0A_C: Sporulation initiation factor Spo0A C terminal; InterPro: IPR014879 The response regulator Spo0A is comprised of a phophoacceptor domain and a transcription activation domain. This domain corresponds to the transcription activation domain and forms an alpha helical structure comprising of 6 alpha helices. The structure contains a helix-turn-helix and binds DNA [, ]. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0005509 calcium ion binding, 0006355 regulation of transcription, DNA-dependent, 0042173 regulation of sporulation resulting in formation of a cellular spore, 0005737 cytoplasm; PDB: 1FC3_C 1LQ1_D.
Probab=42.15 E-value=46 Score=16.47 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=20.6
Q ss_pred CHHHHHHHHHhccCC-C--------------CCCCCHHHHHHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQ-P--------------ELRPTFRQLKAKLLTF 63 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~-p--------------~~Rp~~~~i~~~l~~~ 63 (69)
-..++..|..||... + ..||+-.|++..+-..
T Consensus 58 ERaIR~aI~~~w~~g~~~~l~~i~g~~~~~~~~kPTnsEFI~~~~~~ 104 (106)
T PF08769_consen 58 ERAIRHAIEVAWTRGNPELLEKIFGYTINEEKGKPTNSEFIAMLADY 104 (106)
T ss_dssp HHHHHHHHHHHHHCS-CCCCHHCC-HHHHT-SS---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhCCCcccCCCCCCHHHHHHHHHHH
Confidence 346888899999732 2 6899999988776543
No 421
>KOG1033|consensus
Probab=42.01 E-value=57 Score=21.03 Aligned_cols=36 Identities=28% Similarity=0.447 Sum_probs=24.0
Q ss_pred HHcCCCCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHH
Q psy925 19 VEKGYQMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 19 v~~g~r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
+++|..++.- .+.|.+ +++.......+|.+||++.+
T Consensus 472 ~r~g~ip~~~~~d~p~e-~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 472 IRDGIIPPEFLQDYPEE-YTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hhcCCCChHHhhcCcHH-HHHHHHhcCCCcccCchHHH
Confidence 4556555322 334444 78889999999999995544
No 422
>PF08059 SEP: SEP domain; InterPro: IPR012989 The SEP (after shp1, eyc and p47) domain is an eukaryotic domain, which occurs frequently and mainly in single units. Almost all proteins containing a SEP domain are succeeded closely by a UBX domain (see PDOC50033 from PROSITEDOC). The function of the SEP domain is as yet unknown but it has been proposed to act as a reversible competitive inhibitor of the lysosomal cysteine protease cathepsin L [, ]. The sructure of the SEP domain comprises a beta-sheet composed of four strands, and two alpha-helices. One side of the beta-sheet faces alpha1 and alpha2. The longer helix alpha1 packs against the four- stranded beta-sheet, where as the shorter helix alpha2 is located at one edge of the globular structure formed by alpha1 and the four stranded beta sheet. A number of highly conserved hydrophobic residues are present in the SEP domain, which are predominantly buried and form the hydrophobic core [, ]. Some proteins known to contain a SEP domain are listed below: - Eukaryotic NSFL1 cofactor p37 (or p97 cofactor p37), an adapter protein required for Golgi and endoplasmic reticulum biogenesis. It is involved in Golgi and endoplasmic reticulum maintenance during interphase and in their reassembly at the end of mitosis. - Eukaryotic NSFL1 cofactor p47 (or p97 cofactor p47), a major adaptor molecule of the cytosolic AAA-type ATPase (ATPases associated with various cellular activities) p97. p47 is required for the p97-regulated membrane reassembly of the endoplasmic reticulum (ER), the nuclear envelope and the Golgi apparatus. - Vertebrate UBX domain-containing protein 4 (UBXD4). - Plant UBA and UBX domain-containing protein. - Saccharomyces cerevisiae (Baker's yeast) UBX domain-containing protein 1 or Suppressor of high-copy PP1 protein (shp1), the homologue of p47. - Drosophila melanogaster (Fruit fly) eyes closed (eyc). ; PDB: 1S3S_G 1VAZ_A 1SS6_A.
Probab=41.99 E-value=24 Score=16.29 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=14.6
Q ss_pred CCCCCCHHHHHHHHHcCCCCC
Q psy925 6 MSSDEPLADVVKHVEKGYQME 26 (69)
Q Consensus 6 Py~~~~~~~i~~~v~~g~r~~ 26 (69)
+|.+-.+.++++.|.+|..|.
T Consensus 17 ~y~dp~n~~Fl~~I~~G~~P~ 37 (75)
T PF08059_consen 17 PYDDPENAQFLEDINRGYFPS 37 (75)
T ss_dssp ETTSTTCHHHHHHHHHT--SC
T ss_pred cCCCHhHHHHHHHHHhcCCCH
Confidence 566667788999999998653
No 423
>PRK12482 flagellar motor protein MotA; Provisional
Probab=41.95 E-value=37 Score=20.02 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=17.3
Q ss_pred cCCCCCCCCHHHHHHHHHHHHH
Q psy925 44 SLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 44 ~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
....+.||+|.++-+.++.+..
T Consensus 264 ~i~~~~~p~f~e~e~~~~~~~~ 285 (287)
T PRK12482 264 LLPLDNKPTFATLDSWINAMIT 285 (287)
T ss_pred cCCCccCCCHHHHHHHHHHhhc
Confidence 4667899999999888776653
No 424
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=41.66 E-value=55 Score=17.22 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=26.0
Q ss_pred CHHHHHHHHHhccC-----CCCCCC----CHHHHHHHHHHHHHh
Q psy925 32 PPEEYEMMRQAWSL-----QPELRP----TFRQLKAKLLTFMLN 66 (69)
Q Consensus 32 ~~~~~~l~~~cw~~-----~p~~Rp----~~~~i~~~l~~~~~~ 66 (69)
.+.++.++...+.+ +|...+ ++.+.+..|+.++..
T Consensus 15 dp~l~ml~~~Mf~q~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~ 58 (141)
T PF12588_consen 15 DPRLYMLFTQMFDQPPYNADPTGNPPQIRDYDEMLQLLNHIMTT 58 (141)
T ss_pred CHHHHHHHHHHHhCcccccCCCCCccccccHHHHHHHHHHHHhh
Confidence 46778888888877 677666 677778888877654
No 425
>TIGR03412 iscX_yfhJ FeS assembly protein IscX. Members of this protein family are YfhJ, a protein of the ISC system for iron-sulfur cluster assembly. Other genes in the system include iscSUA, hscBA, and fdx.
Probab=41.41 E-value=33 Score=15.49 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=16.0
Q ss_pred CCCCCCHHHHHHHHHhccC
Q psy925 27 APEGCPPEEYEMMRQAWSL 45 (69)
Q Consensus 27 ~p~~~~~~~~~l~~~cw~~ 45 (69)
-|..|.+.+.+-|+.||-.
T Consensus 42 dp~~~~EkiLEaIQ~aWie 60 (63)
T TIGR03412 42 DPKRCNEKILEAIQMAWID 60 (63)
T ss_pred CcccccHHHHHHHHHHHHH
Confidence 4678999999999999954
No 426
>PF03677 UPF0137: Uncharacterised protein family (UPF0137); InterPro: IPR005350 This family of bacterial proteins includes a number of plasmid-encoded virulence proteins.
Probab=40.43 E-value=37 Score=19.54 Aligned_cols=54 Identities=15% Similarity=0.211 Sum_probs=30.3
Q ss_pred CCCCCHHHHHHHHHcCCCCCC---------C-----CCCCH---HHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy925 7 SSDEPLADVVKHVEKGYQMEA---------P-----EGCPP---EEYEMMRQAWSLQPELRPTFRQLKAKL 60 (69)
Q Consensus 7 y~~~~~~~i~~~v~~g~r~~~---------p-----~~~~~---~~~~l~~~cw~~~p~~Rp~~~~i~~~l 60 (69)
|.|+++.+++..++.-..+.. + ..... ++..++..|....+.++-...++.+.+
T Consensus 169 ~~G~tkse~i~ii~~~fP~~rs~~~~~~v~s~deknk~Lse~l~~~lklv~~~~~lS~~~~n~l~qL~ek~ 239 (243)
T PF03677_consen 169 YNGETKSEAIDIIRKEFPLSRSSSESRTVDSDDEKNKSLSEQLIEILKLVCSCTELSEYNKNLLQQLFEKL 239 (243)
T ss_pred hcCCChHHHHHHHHHhCCCchhhhhhhccChHHHHHhHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Confidence 677788877776665544331 1 01112 345666777776666665555555443
No 427
>PF04433 SWIRM: SWIRM domain; InterPro: IPR007526 The SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in eukaryotic chromosomal proteins. It is named after the proteins SWI3, RSC8 and MOIRA in which it was first recognised. This domain is predicted to mediate protein-protein interactions in the assembly of chromatin-protein complexes. The SWIRM domain can be linked to different domains, such as the ZZ-type zinc finger (IPR000433 from INTERPRO), the Myb DNA-binding domain (IPR001005 from INTERPRO), the HORMA domain (IPR003511 from INTERPRO), the amino-oxidase domain, the chromo domain (IPR000953 from INTERPRO), and the JAB1/PAD1 domain.; GO: 0005515 protein binding; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2L3D_A ....
Probab=40.31 E-value=24 Score=16.39 Aligned_cols=28 Identities=11% Similarity=0.140 Sum_probs=19.9
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
.+++.|...|..+|...-+..+....+.
T Consensus 37 ~iRn~il~~w~~n~~~~lt~~~~~~~i~ 64 (86)
T PF04433_consen 37 KIRNTILAEWRKNPNKYLTKTDARKLIK 64 (86)
T ss_dssp HHHHHHHHHHHHHTTS---HHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCcccHHHHHHHcc
Confidence 5678888999999999988888865544
No 428
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=40.25 E-value=78 Score=20.03 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=27.3
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
..+..|..-+++.++++.+|++.++.|+.++.
T Consensus 409 ~~~p~i~~fL~Q~~~e~~~~~~t~~~L~~~~~ 440 (441)
T COG1157 409 KLYPKIEQFLKQGIDEKSSFEETLEQLEAILS 440 (441)
T ss_pred HhhHHHHHHHcCCccccCCHHHHHHHHHHHhc
Confidence 45677788899999999999999999988763
No 429
>KOG4236|consensus
Probab=39.38 E-value=33 Score=22.66 Aligned_cols=55 Identities=9% Similarity=0.185 Sum_probs=38.9
Q ss_pred CCcCCCCCCCCHHHHHHHHHcCC--CCCCC-CCCCHHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 1 MNRAEMSSDEPLADVVKHVEKGY--QMEAP-EGCPPEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 1 ~~g~~Py~~~~~~~i~~~v~~g~--r~~~p-~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
++|..||..- .+|-..|.+.. .++-| +.++++..+||.+.++..-.+|-+....+
T Consensus 760 LSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 760 LSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ecccccCCCc--cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 3588888654 34556665543 34444 46888999999999998888888877654
No 430
>KOG0044|consensus
Probab=39.02 E-value=71 Score=17.74 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=32.9
Q ss_pred CCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 27 APEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 27 ~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
.|...+....+.+-+-+..+-+.-.+|.+.+..|......
T Consensus 57 fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rG 96 (193)
T KOG0044|consen 57 FPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRG 96 (193)
T ss_pred CCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCC
Confidence 3566777888999999999999999999988888766544
No 431
>PF10985 DUF2805: Protein of unknown function (DUF2805); InterPro: IPR019882 This entry represents an uncharacterised bacterial protein family. Members average about 90 amino acids in length with several well-conserved uncommon amino acids (Trp, Met). The majority of species are marine bacteria. Few species have more than one copy, but Vibrio cholerae O1 biovar eltor str. N16961 has three identical copies.
Probab=38.85 E-value=46 Score=15.52 Aligned_cols=19 Identities=26% Similarity=0.667 Sum_probs=13.6
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q psy925 37 EMMRQAWSLQPELRPTFRQLKAK 59 (69)
Q Consensus 37 ~l~~~cw~~~p~~Rp~~~~i~~~ 59 (69)
.+|...| ++|.+|+.|...
T Consensus 3 riIeMAw----eDRtpFeaI~~q 21 (73)
T PF10985_consen 3 RIIEMAW----EDRTPFEAIERQ 21 (73)
T ss_pred HHHHHHH----ccCCCHHHHHHH
Confidence 4666777 578889988654
No 432
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=38.57 E-value=40 Score=14.79 Aligned_cols=31 Identities=10% Similarity=0.154 Sum_probs=22.1
Q ss_pred HHHHHHhccCCC-CCCCCHHHHHHHHHHHHHh
Q psy925 36 YEMMRQAWSLQP-ELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 36 ~~l~~~cw~~~p-~~Rp~~~~i~~~l~~~~~~ 66 (69)
.+|+...|..+. ..+-+....+..|.+.+..
T Consensus 28 ~~l~~~~w~~~~~~~~~~l~~~I~rLR~kL~~ 59 (77)
T PF00486_consen 28 EELIEALWGDEEDVSDNSLDVHISRLRKKLED 59 (77)
T ss_dssp HHHHHHHTSSSSTTCTHHHHHHHHHHHHHHHS
T ss_pred HHhCChhhhcccccchhhHHHHHHHHHHHHhh
Confidence 578888998887 5666667767777666544
No 433
>cd05491 Bromo_TBP7_like Bromodomain; TBP7_like subfamily, limited to fungi. TBP7, or TAT-binding protein homolog 7, is a yeast protein of unknown function that contains AAA-superfamily ATP-ase domains and a bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=37.83 E-value=17 Score=18.53 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=29.1
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCC
Q psy925 7 SSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPEL 49 (69)
Q Consensus 7 y~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~ 49 (69)
|..++...|-..+.+|+. ..|...-.++.-+...|-..+..+
T Consensus 62 ~y~MDL~tIe~RL~ng~Y-~tp~~F~~DiklI~~Nc~~ynd~d 103 (119)
T cd05491 62 FYNMDLDTIEERLWNGYY-ATPKDFLKDIKRIVRDAKTIGDRE 103 (119)
T ss_pred EeccCHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhCCHH
Confidence 445666667777877764 335566678888888998877653
No 434
>PF08542 Rep_fac_C: Replication factor C C-terminal domain; InterPro: IPR013748 Replication factor C (RFC) is a multimeric AAA+ protein complex that loads the DNA polymerase processivity clamp PCNA (Proliferating Cell Nuclear Antigen) onto DNA using ATP to drive the reaction []. PCNA functions at multiple levels in directing DNA metabolic pathways []. When bound to DNA, PCNA organises various proteins involved in DNA replication, DNA repair, DNA modification, and chromatin modelling. Replication factor C consists of five subunits in a spiral arrangement: Rfc1, Rfc2, Rfc3, Rfc4, and Rfc5 subunits. Rfc1 and Rfc2 load the PCNA sliding clamp onto DNA, while Rfc3 binds ATP and also acts as a checkpoint sensor. The RFC complex contains four ATP sites (sites A, B, C, and D) located at subunit interfaces. In each ATP site, an arginine residue from one subunit is located near the gamma-phosphate of ATP bound in the adjacent subunit. These arginine residues act as "arginine fingers" that can potentially perform two functions: sensing that ATP is bound and catalyzing ATP hydrolysis []. This entry represents the core domain found in Rfc1-5.; GO: 0003689 DNA clamp loader activity, 0005524 ATP binding, 0006260 DNA replication, 0005663 DNA replication factor C complex; PDB: 1SXJ_B 2CHG_B 2CHV_F 2CHQ_C 1IQP_A.
Probab=37.68 E-value=47 Score=15.26 Aligned_cols=28 Identities=14% Similarity=0.300 Sum_probs=15.7
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
..+.+++..|... +|.++...+..+...
T Consensus 6 ~~i~~i~~~~~~~------~~~~~~~~~~~l~~~ 33 (89)
T PF08542_consen 6 EVIEEILESCLNG------DFKEARKKLYELLVE 33 (89)
T ss_dssp HHHHHHHHHHHHT------CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC------CHHHHHHHHHHHHHc
Confidence 4455666666544 566666666555543
No 435
>PF07010 Endomucin: Endomucin; InterPro: IPR010740 This family consists of several mammalian endomucin proteins. Endomucin is an early endothelial-specific antigen that is also expressed on putative hematopoietic progenitor cells.
Probab=37.60 E-value=35 Score=19.65 Aligned_cols=14 Identities=21% Similarity=0.544 Sum_probs=10.5
Q ss_pred HHHHHHHhccCCCC
Q psy925 35 EYEMMRQAWSLQPE 48 (69)
Q Consensus 35 ~~~l~~~cw~~~p~ 48 (69)
+..|...||..+|.
T Consensus 207 LvgLyr~C~k~dPg 220 (259)
T PF07010_consen 207 LVGLYRMCWKTDPG 220 (259)
T ss_pred HHHHHHHhhcCCCC
Confidence 34556789999987
No 436
>COG3299 XkdT Uncharacterized homolog of phage Mu protein gp47 [Function unknown]
Probab=37.00 E-value=59 Score=19.91 Aligned_cols=20 Identities=30% Similarity=0.428 Sum_probs=16.0
Q ss_pred CCCCCCHHHHHHHHHHHHHh
Q psy925 47 PELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 47 p~~Rp~~~~i~~~l~~~~~~ 66 (69)
+-+||+|.++...+......
T Consensus 1 ~f~~~T~~~l~er~~~~i~~ 20 (353)
T COG3299 1 MFKRPTFEELMERMETIISS 20 (353)
T ss_pred CCCCccHHHHHHHHHHHHHH
Confidence 35799999999988877653
No 437
>PF15331 TP53IP5: Cellular tumour antigen p53-inducible 5
Probab=36.85 E-value=26 Score=19.77 Aligned_cols=12 Identities=17% Similarity=0.589 Sum_probs=10.6
Q ss_pred HHHHHHHHHhcc
Q psy925 33 PEEYEMMRQAWS 44 (69)
Q Consensus 33 ~~~~~l~~~cw~ 44 (69)
.++++|..+||.
T Consensus 34 qeLHnLAkrCW~ 45 (220)
T PF15331_consen 34 QELHNLAKRCWN 45 (220)
T ss_pred HHHHHHHHHHHH
Confidence 589999999996
No 438
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=36.58 E-value=41 Score=19.91 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=20.5
Q ss_pred CCCCCCCCHHHHHHHHHhccCCCCCCCCHHH
Q psy925 25 MEAPEGCPPEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 25 ~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
++.....|.++++||.. .......||+...
T Consensus 241 L~V~t~~p~ei~~lm~l-ypq~~~~~~~v~y 270 (285)
T PF01972_consen 241 LPVSTDMPEEIYELMDL-YPQPVQRRPSVEY 270 (285)
T ss_pred CCcCCCCcHHHHHHHHh-CccccCCCCCcee
Confidence 34446789999999944 5555556787544
No 439
>cd06399 PB1_P40 The PB1 domain is essential part of the p40 adaptor protein which plays an important role in activating phagocyte NADPH oxidase during phagocytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes , such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domain of p40 represents a type I PB1 domain which interacts with the PB1 domain of oxidase activator p67 w
Probab=36.38 E-value=57 Score=15.87 Aligned_cols=24 Identities=13% Similarity=-0.028 Sum_probs=19.0
Q ss_pred hccCCCCCCCCHHHHHHHHHHHHH
Q psy925 42 AWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 42 cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
|...+-..-|+|++++..+.+.++
T Consensus 19 ~vee~l~~~P~~kdLl~lmr~~f~ 42 (92)
T cd06399 19 AVEEDLSSTPLLKDLLELTRREFQ 42 (92)
T ss_pred EeecccccCccHHHHHHHHHHHhc
Confidence 778888888999998887766554
No 440
>PF12090 Spt20: Spt20 family; InterPro: IPR021950 This presumed domain is found in the Spt20 proteins from both human and yeast. The Spt20 protein is part of the SAGA complex which is a large cmplex mediating histone deacetylation. Yeast Spt20 has been shown to play a role in structural integrity of the SAGA complex as as no intact SAGA could be purified in spt20 deletion strains.
Probab=36.08 E-value=77 Score=17.30 Aligned_cols=31 Identities=10% Similarity=0.187 Sum_probs=20.3
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQ 41 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~ 41 (69)
|..||.+-. ..++..|.+|.. |.++.+++..
T Consensus 35 ~~~pY~~~~-k~~L~~I~~~~i-------P~~Lle~l~~ 65 (182)
T PF12090_consen 35 GSFPYNSPM-KEFLEYIDAGEI-------PHDLLELLDD 65 (182)
T ss_pred ceecCCchH-HHHHHHHHcCCC-------CHHHHHHHHh
Confidence 567787754 677888888775 4555555533
No 441
>KOG0695|consensus
Probab=36.02 E-value=75 Score=19.84 Aligned_cols=49 Identities=16% Similarity=0.227 Sum_probs=27.4
Q ss_pred CCcCCCCC-------CCCHHH-HHHHH-HcCCCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q psy925 1 MNRAEMSS-------DEPLAD-VVKHV-EKGYQMEAPEGCPPEEYEMMRQAWSLQPELRP 51 (69)
Q Consensus 1 ~~g~~Py~-------~~~~~~-i~~~v-~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp 51 (69)
|.|.-||. +.+... +.+.| .+..|. |..++-....++..-+..+|.+|-
T Consensus 445 magrspfdivgm~n~d~ntedylfqvilekqiri--prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 445 MAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI--PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred HcCCCCcceecCCCcccchhHHHHHHHhhhcccc--cceeehhhHHHHHHhhcCCcHHhc
Confidence 55778884 222222 33333 334444 445555555667777888888773
No 442
>PF02755 RPEL: RPEL repeat; InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains. The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.
Probab=35.64 E-value=31 Score=12.59 Aligned_cols=10 Identities=40% Similarity=0.481 Sum_probs=4.9
Q ss_pred CCCCHHHHHH
Q psy925 49 LRPTFRQLKA 58 (69)
Q Consensus 49 ~Rp~~~~i~~ 58 (69)
.||+..+++.
T Consensus 9 ~RP~~~eLv~ 18 (26)
T PF02755_consen 9 QRPTREELVE 18 (26)
T ss_dssp T---HHHHHH
T ss_pred cCCCHHHHHH
Confidence 5888887764
No 443
>PF04384 Fe-S_assembly: Iron-sulphur cluster assembly; InterPro: IPR007479 Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron. These functions depend on the various FeS cluster prosthetic groups, the most common being [2Fe-2S] and [4Fe-4S] []. FeS cluster assembly is a complex process involving the mobilisation of Fe and S atoms from storage sources, their assembly into [Fe-S] form, their transport to specific cellular locations, and their transfer to recipient apoproteins. So far, three FeS assembly machineries have been identified, which are capable of synthesising all types of [Fe-S] clusters: ISC (iron-sulphur cluster), SUF (sulphur assimilation), and NIF (nitrogen fixation) systems. The ISC system is conserved in eubacteria and eukaryotes (mitochondria), and has broad specificity, targeting general FeS proteins [, ]. It is encoded by the isc operon (iscRSUA-hscBA-fdx-iscX). IscS is a cysteine desulphurase, which obtains S from cysteine (converting it to alanine) and serves as a S donor for FeS cluster assembly. IscU and IscA act as scaffolds to accept S and Fe atoms, assembling clusters and transfering them to recipient apoproteins. HscA is a molecular chaperone and HscB is a co-chaperone. Fdx is a [2Fe-2S]-type ferredoxin. IscR is a transcription factor that regulates expression of the isc operon. IscX (also known as YfhJ) appears to interact with IscS and may function as an Fe donor during cluster assembly []. The SUF system is an alternative pathway to the ISC system that operates under iron starvation and oxidative stress. It is found in eubacteria, archaea and eukaryotes (plastids). The SUF system is encoded by the suf operon (sufABCDSE), and the six encoded proteins are arranged into two complexes (SufSE and SufBCD) and one protein (SufA). SufS is a pyridoxal-phosphate (PLP) protein displaying cysteine desulphurase activity. SufE acts as a scaffold protein that accepts S from SufS and donates it to SufA []. SufC is an ATPase with an unorthodox ATP-binding cassette (ABC)-like component. No specific functions have been assigned to SufB and SufD. SufA is homologous to IscA [], acting as a scaffold protein in which Fe and S atoms are assembled into [FeS] cluster forms, which can then easily be transferred to apoproteins targets. In the NIF system, NifS and NifU are required for the formation of metalloclusters of nitrogenase in Azotobacter vinelandii, and other organisms, as well as in the maturation of other FeS proteins. Nitrogenase catalyses the fixation of nitrogen. It contains a complex cluster, the FeMo cofactor, which contains molybdenum, Fe and S. NifS is a cysteine desulphurase. NifU binds one Fe atom at its N-terminal, assembling an FeS cluster that is transferred to nitrogenase apoproteins []. Nif proteins involved in the formation of FeS clusters can also be found in organisms that do not fix nitrogen []. This entry represents IscX proteins (also known as hypothetical protein YfhJ) that are part of the ISC system. IscX is active as a monomer. The structure of YfhJ is an orthogonal alpha-bundle []. YfhJ is a small acidic protein that binds IscS, and contains a modified winged helix motif that is usually found in DNA-binding proteins []. YfhJ/IscX can bind Fe, and may function as an Fe donor in the assembly of FeS clusters ; GO: 0016226 iron-sulfur cluster assembly; PDB: 2BZT_A 1UJ8_A.
Probab=35.07 E-value=41 Score=15.27 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=17.7
Q ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHhcc
Q psy925 13 ADVVKHVEKG-YQMEAPEGCPPEEYEMMRQAWS 44 (69)
Q Consensus 13 ~~i~~~v~~g-~r~~~p~~~~~~~~~l~~~cw~ 44 (69)
..+...|..- .--.-|..|.+.+.+-|+.+|-
T Consensus 28 tdL~~wv~~L~~F~Ddp~~~~E~iLEaIq~aW~ 60 (64)
T PF04384_consen 28 TDLHEWVLELPDFDDDPKRCNEKILEAIQMAWI 60 (64)
T ss_dssp HHHHHHHHCSTTB-S-CCG--HHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCcCCCccccCHHHHHHHHHHHH
Confidence 3444445332 1122467889999999999994
No 444
>PF14611 SLS: Mitochondrial inner-membrane-bound regulator
Probab=34.76 E-value=34 Score=18.67 Aligned_cols=17 Identities=18% Similarity=0.474 Sum_probs=12.6
Q ss_pred HHHHHHHhccCCCCCCC
Q psy925 35 EYEMMRQAWSLQPELRP 51 (69)
Q Consensus 35 ~~~l~~~cw~~~p~~Rp 51 (69)
+..||..||.....+..
T Consensus 6 ~~~Il~d~W~l~v~e~v 22 (210)
T PF14611_consen 6 AERILRDCWNLEVSEEV 22 (210)
T ss_pred HHHHHHHhcCCccccee
Confidence 45788999998776543
No 445
>PF07763 FEZ: FEZ-like protein; InterPro: IPR011680 This is a family of eukaryotic proteins thought to be involved in axonal outgrowth and fasciculation []. The N-terminal regions of these sequences are less conserved than the C-terminal regions, and are highly acidic []. The Caenorhabditis elegans homolog, UNC-76 (Q7JNU9 from SWISSPROT), may play structural and signalling roles in the control of axonal extension and adhesion (particularly in the presence of adjacent neuronal cells []) and these roles have also been postulated for other FEZ family proteins []. Certain homologs have been definitively found to interact with the N-terminal variable region (V1) of PKC-zeta, and this interaction causes cytoplasmic translocation of the FEZ family protein in mammalian neuronal cells []. The C-terminal region probably participates in the association with the regulatory domain of PKC-zeta []. The members of this family are predicted to form coiled-coil structures [, ], which may interact with members of the RhoA family of signalling proteins [], but are not thought to contain other characteristic protein motifs []. Certain members of this family are expressed almost exclusively in the brain, whereas others (such as FEZ2, Q76LN0 from SWISSPROT) are expressed in other tissues, and are thought to perform similar but unknown functions in these tissues [].
Probab=33.81 E-value=80 Score=18.32 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=23.0
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
+++.+|..|...+|-. +..+|+..+..+++.+
T Consensus 99 D~hslI~s~l~eePl~--TAdqVIeEIdemMq~s 130 (244)
T PF07763_consen 99 DMHSLIVSCLNEEPLQ--TADQVIEEIDEMMQES 130 (244)
T ss_pred chHHHHhcCCCCCcch--hHHHHHHHHHHHHhcC
Confidence 5778888888766653 5678888888777654
No 446
>KOG4138|consensus
Probab=33.09 E-value=33 Score=16.59 Aligned_cols=20 Identities=25% Similarity=0.366 Sum_probs=15.1
Q ss_pred HHHHHhccCCCCCCCCHHHH
Q psy925 37 EMMRQAWSLQPELRPTFRQL 56 (69)
Q Consensus 37 ~l~~~cw~~~p~~Rp~~~~i 56 (69)
+...+||...-..|++..+.
T Consensus 68 ~~FrkCwek~~g~r~~~s~~ 87 (96)
T KOG4138|consen 68 QAFRKCWEKQQGRRQEESQR 87 (96)
T ss_pred HHHHHHHHHHcCCchHHHHH
Confidence 45589999888888876654
No 447
>COG4628 Uncharacterized conserved protein [Function unknown]
Probab=33.07 E-value=48 Score=16.94 Aligned_cols=44 Identities=7% Similarity=0.098 Sum_probs=26.4
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH-HHhccCCCCCCCCHH
Q psy925 4 AEMSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMM-RQAWSLQPELRPTFR 54 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~-~~cw~~~p~~Rp~~~ 54 (69)
.-|..|++...++..+.+.+. ...+.+-| -+|+..+|.-..|.+
T Consensus 12 ~nPLHGltLE~llt~Lvd~YG-------Wd~L~~ri~inCF~ndPSi~SSlK 56 (136)
T COG4628 12 NNPLHGLTLETLLTELVDFYG-------WDGLATRIRINCFHNDPSIKSSLK 56 (136)
T ss_pred cCCcccccHHHHHHHHHHHhC-------hHHHHhhceeccccCCccHHHHHH
Confidence 457788888877776655543 23334333 478888776444433
No 448
>cd00059 FH Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=32.98 E-value=60 Score=15.12 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=18.5
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 36 YEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 36 ~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
..||.......|+++-+..+|-..+..
T Consensus 7 ~~LI~~Ai~~sp~~~lTL~eIy~~I~~ 33 (78)
T cd00059 7 SALIAMAIQSSPEKRLTLSEIYKWISD 33 (78)
T ss_pred HHHHHHHHHhCCCCCeeHHHHHHHHHH
Confidence 466666667777777777777765543
No 449
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=32.77 E-value=52 Score=14.38 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=20.9
Q ss_pred HHHHHHhccCCC--CCCCCHHHHHHHHHHHHH
Q psy925 36 YEMMRQAWSLQP--ELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 36 ~~l~~~cw~~~p--~~Rp~~~~i~~~l~~~~~ 65 (69)
.+|+..+|..+. ..+-+....+..|.+.+.
T Consensus 28 ~~l~~~lw~~~~~~~~~~~l~~~i~~LR~~l~ 59 (78)
T smart00862 28 EELLEAVWGDDDDDVDDNTLDVHISRLRKKLE 59 (78)
T ss_pred HHHHHHHcCCCCCCCccchHHHHHHHHHHHHh
Confidence 567778997654 456677777777777664
No 450
>KOG0606|consensus
Probab=32.58 E-value=82 Score=22.58 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=40.5
Q ss_pred CcCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhccCCCCCCCCHH
Q psy925 2 NRAEMSSDEPLADVVKHVEKGYQME--APEGCPPEEYEMMRQAWSLQPELRPTFR 54 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v~~g~r~~--~p~~~~~~~~~l~~~cw~~~p~~Rp~~~ 54 (69)
.|..||..-..+++.+.+.++..+- .|...+.+..+++..-...++..|-.+.
T Consensus 1030 ~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 5889999999999988876665422 3456788889999888888888776554
No 451
>PF04458 DUF505: Protein of unknown function (DUF505); InterPro: IPR007548 This is a family of uncharacterised prokaryotic proteins.
Probab=32.45 E-value=1.4e+02 Score=19.73 Aligned_cols=47 Identities=23% Similarity=0.477 Sum_probs=30.9
Q ss_pred HHHHHHHcCCCCCCCC-CCC---HHHHHHHHHhc---cCCCCCCCCHHHHHHHH
Q psy925 14 DVVKHVEKGYQMEAPE-GCP---PEEYEMMRQAW---SLQPELRPTFRQLKAKL 60 (69)
Q Consensus 14 ~i~~~v~~g~r~~~p~-~~~---~~~~~l~~~cw---~~~p~~Rp~~~~i~~~l 60 (69)
+++....++...+.|. .+. -++..-|..-| ..+|+..|++++|...+
T Consensus 267 eay~l~~~~~~~~~~~f~le~~E~evLk~I~~lwkk~e~nPe~~PT~~eI~~~l 320 (591)
T PF04458_consen 267 EAYRLWKEGEEKPVPSFALEEDEVEVLKAIDHLWKKHETNPEELPTFKEIKREL 320 (591)
T ss_pred HHHHHHhcccccCCCceecchhHHHHHHHHHHHHhhccCCcccCCCHHHHHHHH
Confidence 4444456665555443 233 25667777778 47899999999998754
No 452
>KOG0668|consensus
Probab=31.49 E-value=51 Score=19.43 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
.+++..+++.+.+..+-.+|++.++...
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhc
Confidence 4688899999999999999999998764
No 453
>COG3327 PaaX Phenylacetic acid-responsive transcriptional repressor [Transcription]
Probab=31.26 E-value=27 Score=20.44 Aligned_cols=16 Identities=19% Similarity=0.376 Sum_probs=12.9
Q ss_pred HHHHHHHHHhccCCCC
Q psy925 33 PEEYEMMRQAWSLQPE 48 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~ 48 (69)
.+...++.+||+.+..
T Consensus 165 ~epk~l~e~CWdL~e~ 180 (291)
T COG3327 165 GEPKALAEKCWDLSEW 180 (291)
T ss_pred hchHHHHHHhcCchHH
Confidence 4678999999987653
No 454
>KOG3046|consensus
Probab=30.24 E-value=94 Score=16.52 Aligned_cols=39 Identities=10% Similarity=0.222 Sum_probs=23.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 13 ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 13 ~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
.+|++.|.+|.-|. --..+++.+|...+-..+..+..+.
T Consensus 74 leVl~yIddGrNPd------~ytke~le~~~~kNq~vkGK~~~~K 112 (147)
T KOG3046|consen 74 LEVLEYIDDGRNPD------LYTKEFLEKCLAKNQYVKGKIDAFK 112 (147)
T ss_pred HHHHHHHhcCCCcc------HHHHHHHHHHHHhhhHHhhhHHHHH
Confidence 46666666665432 2234677778877777666655543
No 455
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=29.44 E-value=42 Score=12.30 Aligned_cols=11 Identities=36% Similarity=0.531 Sum_probs=7.9
Q ss_pred CCCCCHHHHHH
Q psy925 48 ELRPTFRQLKA 58 (69)
Q Consensus 48 ~~Rp~~~~i~~ 58 (69)
..||+-.+++.
T Consensus 8 ~~RP~~eeLv~ 18 (26)
T smart00707 8 SQRPTREELEE 18 (26)
T ss_pred HcCCCHHHHHH
Confidence 46888887764
No 456
>KOG0663|consensus
Probab=29.01 E-value=66 Score=19.96 Aligned_cols=28 Identities=11% Similarity=0.197 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 31 CPPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 31 ~~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++..=++|+...+.++|.+|-+..+-++
T Consensus 333 lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 333 LSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cchhHHHHHHHHhccCccccccHHHhhc
Confidence 5577789999999999999999998765
No 457
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=28.47 E-value=1e+02 Score=16.49 Aligned_cols=33 Identities=6% Similarity=0.144 Sum_probs=20.9
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q psy925 7 SSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMRQ 41 (69)
Q Consensus 7 y~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~ 41 (69)
+.+.+.++|...+..|.. .-...|+.++++|..
T Consensus 121 r~~~S~T~IR~~i~~~~~--W~~lVP~~v~~~i~~ 153 (165)
T TIGR01527 121 RKEYSGTEIRRRMLNGED--WEHLVPKAVADVIKE 153 (165)
T ss_pred CCcccHHHHHHHHHcCCC--hhhhCCHHHHHHHHH
Confidence 455666677777766643 345667777777655
No 458
>smart00339 FH FORKHEAD. FORKHEAD, also known as a "winged helix"
Probab=28.30 E-value=79 Score=15.07 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=15.0
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 36 YEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 36 ~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
..+|.......|+++-+..+|-..+.
T Consensus 7 ~~lI~~ai~~sp~~~ltl~~Iy~~I~ 32 (89)
T smart00339 7 IALIAMAILSSPDKRLTLSEIYKWIE 32 (89)
T ss_pred HHHHHHHHHhCCCCCeeHHHHHHHHH
Confidence 45555555556666666666655443
No 459
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyse alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. ; PDB: 2Y4S_A 2FH8_A 2FH6_A 2Y5E_A 2FHC_A 2FHB_A 2FHF_A 2FGZ_A.
Probab=28.20 E-value=1.1e+02 Score=16.67 Aligned_cols=29 Identities=21% Similarity=0.471 Sum_probs=19.1
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q psy925 34 EEYEMMRQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 34 ~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
+-|.+|..-+ .+|..+|+.++|......+
T Consensus 19 ~~W~~i~~ll-~d~~~kP~~~~I~~a~~~f 47 (168)
T PF11852_consen 19 DNWPLIRPLL-ADPALKPSPADIAAASAYF 47 (168)
T ss_dssp GGHHHHHHHH-CTCCGS--HHHHHHHHHHH
T ss_pred cchhhhhhhc-cCCccCCCHHHHHHHHHHH
Confidence 4467776665 8899999999996554443
No 460
>cd05509 Bromo_gcn5_like Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=27.70 E-value=82 Score=15.04 Aligned_cols=54 Identities=15% Similarity=0.201 Sum_probs=33.0
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 11 PLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 11 ~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
+...|...+..|... -....-.++.-+..+|...+..+.+-.. ....|...+..
T Consensus 43 dL~tI~~kl~~~~Y~-s~~~f~~Dv~li~~Na~~yN~~~s~~~~-~a~~l~~~f~~ 96 (101)
T cd05509 43 DLSTMEEKLENGYYV-TLEEFVADLKLIFDNCRLYNGPDTEYYK-CANKLEKFFWK 96 (101)
T ss_pred CHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHH
Confidence 444566667666532 2345566788888899888887776443 44445555443
No 461
>PF10792 DUF2605: Protein of unknown function (DUF2605); InterPro: IPR019728 This entry represents a protein conserved in Cyanobacteria. The function is not known.
Probab=26.96 E-value=44 Score=16.51 Aligned_cols=14 Identities=7% Similarity=0.416 Sum_probs=10.7
Q ss_pred HHHHHHHHhccCCC
Q psy925 34 EEYEMMRQAWSLQP 47 (69)
Q Consensus 34 ~~~~l~~~cw~~~p 47 (69)
..++|+..||+...
T Consensus 80 pWH~LV~EcW~va~ 93 (98)
T PF10792_consen 80 PWHQLVTECWQVAA 93 (98)
T ss_pred hHHHHHHHHHHHHH
Confidence 46799999997543
No 462
>KOG0666|consensus
Probab=26.95 E-value=63 Score=19.96 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=22.9
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
++.-++|+.+.+.+||.+|-+.++.+.
T Consensus 310 ~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 310 DPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred CchHHHHHHHHhccCchhhccHHHHhc
Confidence 444689999999999999999998765
No 463
>KOG0986|consensus
Probab=26.78 E-value=1e+02 Score=20.03 Aligned_cols=50 Identities=12% Similarity=0.035 Sum_probs=31.7
Q ss_pred cCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCH
Q psy925 3 RAEMSSDEP----LADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTF 53 (69)
Q Consensus 3 g~~Py~~~~----~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~ 53 (69)
|..||..-. ..+|-..+.+.. -.-|...+++..+|-...+..+|.+|--+
T Consensus 382 G~sPFr~~KeKvk~eEvdrr~~~~~-~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 382 GHSPFRQRKEKVKREEVDRRTLEDP-EEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred ccCchhhhhhhhhHHHHHHHHhcch-hhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 677776542 224444443221 12357889999999988899999887433
No 464
>cd05510 Bromo_SPT7_like Bromodomain; SPT7_like subfamily. SPT7 is a yeast protein that functions as a component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA, and SLIK. SAGA is involved in the RNA polymerase II-dependent transcriptional regulation of about 10% of all yeast genes. The SPT7 bromodomain has been shown to weakly interact with acetylated histone H3, but not H4. The human representative of this subfamily is cat eye syndrome critical region protein 2 (CECR2). Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=26.35 E-value=97 Score=15.42 Aligned_cols=53 Identities=6% Similarity=-0.005 Sum_probs=29.8
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 11 PLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 11 ~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
+...|...+.+|.... ....-.++.-+..+|-.++.............|....
T Consensus 50 dL~tI~~kl~~~~Y~s-~~ef~~D~~Li~~N~~~yN~~~s~~~~~~A~~l~~~~ 102 (112)
T cd05510 50 DLGTMLKKLKNLQYKS-KAEFVDDLNLIWKNCLLYNSDPSHPLRRHANFMKKKA 102 (112)
T ss_pred CHHHHHHHHhCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 3345556666664322 3445567777778898888765533333334444443
No 465
>COG3084 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.11 E-value=71 Score=15.02 Aligned_cols=16 Identities=31% Similarity=0.777 Sum_probs=13.0
Q ss_pred HHHHHHHHHhccCCCC
Q psy925 33 PEEYEMMRQAWSLQPE 48 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~ 48 (69)
.++.++.+--|+.+|+
T Consensus 7 nevlellqp~w~k~~d 22 (88)
T COG3084 7 NEVIELLQPAWQKEPD 22 (88)
T ss_pred HHHHHHhhHHhccCCC
Confidence 3677888889999987
No 466
>PF10742 DUF2555: Protein of unknown function (DUF2555); InterPro: IPR019678 This entry represents conserved proteins found in Cyanobacteria. The function is not known.
Probab=25.76 E-value=53 Score=14.53 Aligned_cols=17 Identities=0% Similarity=-0.164 Sum_probs=12.9
Q ss_pred cCCCCCCCCHHHHHHHH
Q psy925 3 RAEMSSDEPLADVVKHV 19 (69)
Q Consensus 3 g~~Py~~~~~~~i~~~v 19 (69)
...||.+++...++..+
T Consensus 26 Y~~pF~~L~DWhlLRal 42 (57)
T PF10742_consen 26 YPNPFDGLKDWHLLRAL 42 (57)
T ss_pred CCchhhhhhHHHHHHHH
Confidence 46789999887776655
No 467
>KOG4695|consensus
Probab=25.72 E-value=1.1e+02 Score=15.64 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=28.3
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHhccCC-CCCCCCHHHHHHHH
Q psy925 5 EMSSDEPLADVVKHVEKGYQMEAPE-GCPPEEYEMMRQAWSLQ-PELRPTFRQLKAKL 60 (69)
Q Consensus 5 ~Py~~~~~~~i~~~v~~g~r~~~p~-~~~~~~~~l~~~cw~~~-p~~Rp~~~~i~~~l 60 (69)
.||...-+......|..|.+....+ .|-.++ ..+..||..+ -++-+--++|...+
T Consensus 21 ~vf~eilPL~lkNrv~~g~~~~gs~~tC~qEm-~vlfaClK~nEF~d~~C~Kei~~f~ 77 (122)
T KOG4695|consen 21 PVFKEILPLILKNRVGEGRREKGSEATCIQEM-SVLFACLKQNEFRDDACRKEIQGFL 77 (122)
T ss_pred CccccchhHHHhhhhccccCCcccchHHHHHH-HHHHHHHHhccccchHHHHHHHHHH
Confidence 3444444433344466677655433 354554 4456899643 34455555554433
No 468
>PF02918 Pertussis_S2S3: Pertussis toxin, subunit 2 and 3, C-terminal domain; InterPro: IPR020063 A large group of bacterial exotoxins are referred to as "A/B toxins", essentially because they are formed from two subunits []. The "A" subunit possesses enzyme activity, and is transferred to the host cell following a conformational change in the membrane-bound transport "B" subunit []. Bordetella pertussis is the causative agent of whooping cough, and is a Gram-negative aerobic coccus. Its major virulence factor is the pertussis toxin, an A/B exotoxin that mediates both colonisation and toxaemic stages of the the disease [, ]. Recombinant, inactive forms of the 5 subunits that make up the toxin have proven to be good vaccines. The S2 and S3 subunits of the toxin form part of the "B" moiety. They are responsible for binding the whole toxin to host cells prior to invasion, and are classed as adhesins []. S2 attaches to a host receptor called lactosylceramide. It has also been speculated that the S3 unit may preferentially bind phagocytes. The crystal structure of pertussis toxin has been determined to 2.9A resolution []. The catalytic A-subunit (S1) shares structural similarity with other ADP-ribosylating bacterial toxins, although differences in the C-terminal portion explain its unique activation mechanism. Despite its heterogeneous subunit composition, the structure of the cell-binding B-oligomer (S2, S3, two copies of S4, and S5) resembles the symmetrical B-pentamers of the cholera and shiga toxin families, but it interacts differently with the A-subunit and there is virtually no sequence similarity between B-subunits of the different toxins. Two peripheral domains that are unique to the pertussis toxin B-oligomer share structural similarity with a calcium-dependent eukaryotic lectin, and reveal possible receptor-binding sites.; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 1BCP_H 1PRT_H 1PTO_B.
Probab=25.55 E-value=1e+02 Score=15.48 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=17.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhh
Q psy925 45 LQPELRPTFRQLKAKLLTFMLNS 67 (69)
Q Consensus 45 ~~p~~Rp~~~~i~~~l~~~~~~~ 67 (69)
.+-.-|++|+++.+.+..+....
T Consensus 49 ~~g~~~~~y~~L~~~~~~~y~tG 71 (109)
T PF02918_consen 49 YQGKYRPSYSALRDQLYYFYSTG 71 (109)
T ss_dssp SSSTTCCCHHHHHHHHHHHHHCT
T ss_pred cccchhHHHHHHHHHHHHHHHcC
Confidence 45557899999999888776544
No 469
>COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]
Probab=25.47 E-value=2e+02 Score=18.79 Aligned_cols=36 Identities=11% Similarity=0.240 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 30 GCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 30 ~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
+|...+..++.+-. ..+.+||.+..|+..++.++++
T Consensus 266 N~~~kvfsl~lR~i-~~~t~rp~s~~ii~t~ks~lee 301 (657)
T COG5117 266 NCTDKVFSLVLRGI-LGTTKRPVSMLIIDTIKSKLEE 301 (657)
T ss_pred CcHHHHHHHHHHHh-hCCCCCchHHHHHHHHHHHhcc
Confidence 56667776664433 2358999999999999888764
No 470
>smart00553 SEP Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47.
Probab=25.02 E-value=98 Score=15.04 Aligned_cols=20 Identities=15% Similarity=0.238 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHHHHcCCCC
Q psy925 6 MSSDEPLADVVKHVEKGYQM 25 (69)
Q Consensus 6 Py~~~~~~~i~~~v~~g~r~ 25 (69)
+|.+-.+.++++.|.+|..|
T Consensus 23 ~yddP~N~~FL~~I~~G~~P 42 (93)
T smart00553 23 TYDDPENAEFLESIRRGEAP 42 (93)
T ss_pred cCCCHhHHHHHHHHHcCCCC
Confidence 45555677888889999853
No 471
>cd05502 Bromo_tif1_like Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or corepressors to modulate transcription. Vertebrate Tif1-gamma, also labeled E3 ubiquitin-protein ligase TRIM33, plays a role in the control of hematopoiesis. Its homologue in Xenopus laevis, Ectodermin, has been shown to function in germ-layer specification and control of cell growth during embryogenesis. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=24.97 E-value=1e+02 Score=15.09 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=29.7
Q ss_pred CHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 11 PLADVVKHVEKG--YQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 11 ~~~~i~~~v~~g--~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
+...|...+..+ ..-.-....-.++.-+..+|-.++..+.. +......|...+.
T Consensus 45 dL~tI~~kL~~~~~~~Y~s~~~f~~D~~li~~Na~~yN~~~s~-i~~~a~~l~~~f~ 100 (109)
T cd05502 45 DLSLIRKKLQPKSPQHYSSPEEFVADVRLMFKNCYKFNEEDSE-VAQAGKELELFFE 100 (109)
T ss_pred cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHH
Confidence 344556666653 12222344556777788888888777643 3333444444443
No 472
>KOG0025|consensus
Probab=24.89 E-value=71 Score=19.40 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=14.3
Q ss_pred CCCCCCHHHHHHHHHHH
Q psy925 47 PELRPTFRQLKAKLLTF 63 (69)
Q Consensus 47 p~~Rp~~~~i~~~l~~~ 63 (69)
-++||+++++.+.|+.+
T Consensus 192 VRdR~~ieel~~~Lk~l 208 (354)
T KOG0025|consen 192 VRDRPNIEELKKQLKSL 208 (354)
T ss_pred eecCccHHHHHHHHHHc
Confidence 46899999999988764
No 473
>PF09039 HTH_Tnp_Mu_2: Mu DNA binding, I gamma subdomain; InterPro: IPR015126 This domain is responsible for binding the DNA attachment sites at each end of the Mu genome. They adopt a secondary structure comprising a four helix bundle tightly packed around a hydrophobic core consisting of aliphatic and aromatic amino acid residues. Helices 1 and 2 are oriented antiparallel to each other. Helix 3 crosses helices 1 and 2 at angles of 60 and 120 degrees, respectively. Excluding the C-terminal helix 4, the fold of the I-gamma subdomain is remarkably similar to that of the homeodomain family of helix-turn-helix DNA-binding proteins, although their amino acid sequences are completely unrelated []. ; PDB: 2EZL_A 2EZH_A 2EZI_A 2EZK_A.
Probab=24.79 E-value=1.1e+02 Score=15.31 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q psy925 29 EGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 29 ~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~ 65 (69)
..+++++++++..=+ =-.++|+|...-..+.....
T Consensus 29 a~~~~eaw~~fksdY--Lr~e~Ps~~~cyrr~~~~a~ 63 (108)
T PF09039_consen 29 AEIDEEAWEFFKSDY--LRPEKPSFSACYRRLKRAAK 63 (108)
T ss_dssp --S-HHHHHHHHHHH--TSTT---HHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHH--cCccCCCHHHHHHHHHHHHH
Confidence 467888888876643 23458888888777766543
No 474
>PF00250 Fork_head: Fork head domain; InterPro: IPR001766 The fork head protein of Drosophila melanogaster, a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors []. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [, , ]. The fork head domain binds B-DNA as a monomer [], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2UZK_A 2K86_A 1JXS_A 2C6Y_A 2A3S_A 2D2W_A 2KIU_A 1VTN_C 2A07_J 2AS5_F ....
Probab=24.53 E-value=1e+02 Score=14.94 Aligned_cols=28 Identities=14% Similarity=0.109 Sum_probs=18.5
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy925 35 EYEMMRQAWSLQPELRPTFRQLKAKLLT 62 (69)
Q Consensus 35 ~~~l~~~cw~~~p~~Rp~~~~i~~~l~~ 62 (69)
...||.......|+++-+..+|...+..
T Consensus 6 Y~~LI~~Ai~~sp~~~Ltl~eIy~~i~~ 33 (96)
T PF00250_consen 6 YATLIAMAILSSPDKRLTLSEIYEWIEE 33 (96)
T ss_dssp HHHHHHHHHHTSTTSEBEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHH
Confidence 3456666666677777777777766543
No 475
>PF02375 JmjN: jmjN domain; InterPro: IPR003349 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with JmjC (see IPR003347 from INTERPRO).; PDB: 2XML_A 2W2I_C 3DXT_A 3DXU_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=24.51 E-value=62 Score=12.57 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=6.5
Q ss_pred CCCCHHHHHHHHHHH
Q psy925 49 LRPTFRQLKAKLLTF 63 (69)
Q Consensus 49 ~Rp~~~~i~~~l~~~ 63 (69)
-|||.+|..+-+..+
T Consensus 3 f~Pt~eEF~dp~~yi 17 (34)
T PF02375_consen 3 FYPTMEEFKDPIKYI 17 (34)
T ss_dssp E---HHHHS-HHHHH
T ss_pred ccCCHHHHhCHHHHH
Confidence 467777776555444
No 476
>PF15112 DUF4559: Domain of unknown function (DUF4559)
Probab=24.33 E-value=1.7e+02 Score=17.65 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=38.5
Q ss_pred HHHHHHHH-HcCCCCC-CCCCCCH-HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 12 LADVVKHV-EKGYQME-APEGCPP-EEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 12 ~~~i~~~v-~~g~r~~-~p~~~~~-~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
..+|.... .+|+.-. .|..|.. .+.++|..|=.+...++-...+|++.-+.+.++
T Consensus 98 ~WEVAKafMPrG~~d~~gpe~cDasALLNlin~Cd~F~~~d~~~v~eVI~~RN~~MHS 155 (307)
T PF15112_consen 98 PWEVAKAFMPRGQADKTGPEECDASALLNLINSCDHFKKYDRKKVREVIKCRNEIMHS 155 (307)
T ss_pred HHHHHHHhcCCcccccCChhhcCHHHHHHHHHHhhccccccHHHHHHHHHHHHHhhcC
Confidence 55776544 5676433 3555544 688999999887777888888888877777654
No 477
>PF05166 YcgL: YcgL domain; InterPro: IPR007840 This family of proteins formerly called DUF709 includes the Escherichia coli gene ycgL. Homologues of YcgL are found in gammaproteobacteria. The structure of this protein shows a novel alpha/beta/alpha sandwich structure []. The proteins in this entry are functionally uncharacterised.; PDB: 2H7A_A.
Probab=24.10 E-value=46 Score=15.54 Aligned_cols=25 Identities=16% Similarity=0.383 Sum_probs=11.0
Q ss_pred CCCCCCCCHHHHHHHH-HcCCCCCCC
Q psy925 4 AEMSSDEPLADVVKHV-EKGYQMEAP 28 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v-~~g~r~~~p 28 (69)
+......+..+|...+ ..|+.+..|
T Consensus 47 ~r~La~~d~~~V~~~l~~~GfyLQ~P 72 (74)
T PF05166_consen 47 ERKLARADAEKVLAALEEQGFYLQMP 72 (74)
T ss_dssp ----SSS-HHHHHHHHHHTSEEEE--
T ss_pred CceeccCCHHHHHHHHHhCCEEEecC
Confidence 3344455666777766 556655443
No 478
>smart00544 MA3 Domain in DAP-5, eIF4G, MA-3 and other proteins. Highly alpha-helical. May contain repeats and/or regions similar to MIF4G domains Ponting (TIBS) "Novel eIF4G domain homologues" in press
Probab=24.07 E-value=69 Score=15.42 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=26.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy925 13 ADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 13 ~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~ 61 (69)
.++...+.+ +..|...+.-+..++..|.+.....|+-...++..|-
T Consensus 19 ~ea~~~l~~---L~~~~~~~~vv~~~i~~~le~~~~~~~~~~~Ll~~L~ 64 (113)
T smart00544 19 DEAVHCLLE---LKLPEQHHEVVKVLLTCALEEKRTYREMYSVLLSRLC 64 (113)
T ss_pred HHHHHHHHH---hCCCcchHHHHHHHHHHHHcCCccHHHHHHHHHHHHH
Confidence 344444433 2223344556667777888776667776666655543
No 479
>KOG0665|consensus
Probab=23.92 E-value=98 Score=19.06 Aligned_cols=27 Identities=11% Similarity=0.164 Sum_probs=23.1
Q ss_pred CHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy925 32 PPEEYEMMRQAWSLQPELRPTFRQLKA 58 (69)
Q Consensus 32 ~~~~~~l~~~cw~~~p~~Rp~~~~i~~ 58 (69)
+.-..++..+.+-.+|++|-+..+++.
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhc
Confidence 445678999999999999999998875
No 480
>TIGR01620 hyp_HI0043 conserved hypothetical protein, TIGR01620. This model includes putative membrane proteins from alpha and gamma proteobacteria, each making up their own clade. The two clades have less than 25% identity between them. We could not find support for the assignment to the sequence from Brucella of being a GTP-binding protein.
Probab=23.39 E-value=1.5e+02 Score=17.71 Aligned_cols=24 Identities=13% Similarity=0.257 Sum_probs=18.4
Q ss_pred HHHHh--ccCCCCCCCCHHHHHHHHH
Q psy925 38 MMRQA--WSLQPELRPTFRQLKAKLL 61 (69)
Q Consensus 38 l~~~c--w~~~p~~Rp~~~~i~~~l~ 61 (69)
-|.-| ..+.+.+||...++.+.+-
T Consensus 260 AmelCRPlpF~~~~rP~l~~i~k~ll 285 (289)
T TIGR01620 260 AMELCRPLPFRAVKKPGLGDFMSDLT 285 (289)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 35566 5688899999999987654
No 481
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=22.45 E-value=41 Score=14.15 Aligned_cols=16 Identities=19% Similarity=0.688 Sum_probs=13.0
Q ss_pred hccCCCCCCCCHHHHH
Q psy925 42 AWSLQPELRPTFRQLK 57 (69)
Q Consensus 42 cw~~~p~~Rp~~~~i~ 57 (69)
-|...|..|..|++..
T Consensus 28 ~wa~~p~~k~~f~eaa 43 (48)
T cd01324 28 VWAFRPGRKKAFDEAA 43 (48)
T ss_pred HHHhCCCcchhHHHHH
Confidence 4888999999888754
No 482
>cd05516 Bromo_SNF2L2 Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone receptors to boost transcriptional activation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=22.39 E-value=1.2e+02 Score=14.90 Aligned_cols=54 Identities=7% Similarity=0.042 Sum_probs=32.1
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q psy925 11 PLADVVKHVEKGYQMEAPEGCPPEEYEMMRQAWSLQPELRPTFRQLKAKLLTFMLN 66 (69)
Q Consensus 11 ~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~~cw~~~p~~Rp~~~~i~~~l~~~~~~ 66 (69)
+...|...+..|... -...+-.++.-+..+|-.++..+.+-+.... .|..++.+
T Consensus 49 dl~tI~~kl~~~~Y~-s~~ef~~D~~li~~Na~~yN~~~s~i~~~a~-~l~~~f~~ 102 (107)
T cd05516 49 DFKKIKERIRNHKYR-SLEDLEKDVMLLCQNAQTFNLEGSLIYEDSI-VLQSVFKS 102 (107)
T ss_pred CHHHHHHHHccCCCC-CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHHHH
Confidence 334555566655432 2344556777788888888888766555543 44555443
No 483
>PF11112 PyocinActivator: Pyocin activator protein PrtN
Probab=22.34 E-value=1e+02 Score=14.33 Aligned_cols=18 Identities=6% Similarity=-0.049 Sum_probs=13.6
Q ss_pred CCCCCHHHHHHHHHcCCC
Q psy925 7 SSDEPLADVVKHVEKGYQ 24 (69)
Q Consensus 7 y~~~~~~~i~~~v~~g~r 24 (69)
|++++.......+..|..
T Consensus 25 f~~lt~~~a~rk~~~g~l 42 (76)
T PF11112_consen 25 FPHLTPKTAKRKANAGEL 42 (76)
T ss_pred HccCCHHHHHHHHHCCCC
Confidence 458888877888888864
No 484
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=22.15 E-value=1.3e+02 Score=17.69 Aligned_cols=18 Identities=0% Similarity=-0.023 Sum_probs=13.5
Q ss_pred CcCCCCCCCCHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV 19 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v 19 (69)
|+..||...+..+|.+.+
T Consensus 39 ~a~~PYG~ks~e~I~~~~ 56 (269)
T COG0796 39 TARFPYGEKSEEEIRERT 56 (269)
T ss_pred CCCCCCCCCCHHHHHHHH
Confidence 467899988888777654
No 485
>PF03607 DCX: Doublecortin; InterPro: IPR003533 X-linked lissencephaly is a severe brain malformation affecting males. Recently it has been demonstrated that the doublecortin gene is implicated in this disorder []. Doublecortin was found to bind to the microtubule cytoskeleton. In vivo and in vitro assays show that Doublecortin stabilises microtubules and causes bundling []. Doublecortin is a basic protein with an iso-electric point of 10, typical of microtubule-binding proteins. However, its sequence contains no known microtubule-binding domain(s). The detailed sequence analysis of Doublecortin and Doublecortin-like proteins allowed the identification of an evolutionarily conserved Doublecortin (DC) domain. This domain is found in the N terminus of proteins and consists of one or two tandemly repeated copies of an around 80 amino acids region. It has been suggested that the first DC domain of Doublecortin binds tubulin and enhances microtubule polymerisation []. Some proteins known to contain a DC domain are listed below: Doublecortin. It is required for neuronal migration []. A large number of point mutations in the human DCX gene leading to lissencephaly are located within the DC domains []. Human serine/threonine-protein kinase DCAMKL1. It is a probable kinase that may be involved in a calcium-signaling pathway controling neuronal migration in the developing brain []. Retinitis pigmentosa 1 protein. It could play a role in the differentiation of photoreceptor cells. Mutation in the human RP1 gene cause retinitis pigmentosa of type 1 []. ; GO: 0035556 intracellular signal transduction; PDB: 1UF0_A 1MG4_A 1MFW_A 2DNF_A 2XRP_I 2BQQ_A 1MJD_A.
Probab=21.81 E-value=91 Score=13.50 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=12.7
Q ss_pred CCCCCCCHHHHHHHHHH
Q psy925 46 QPELRPTFRQLKAKLLT 62 (69)
Q Consensus 46 ~p~~Rp~~~~i~~~l~~ 62 (69)
++..-++|++++..+..
T Consensus 4 ~~r~~~s~e~lL~~it~ 20 (60)
T PF03607_consen 4 NPRRFRSFEQLLDEITE 20 (60)
T ss_dssp STTTHSSHHHHHHHHHH
T ss_pred ChhhhcCHHHHHHHHHh
Confidence 56677888888877655
No 486
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=21.73 E-value=1.4e+02 Score=17.09 Aligned_cols=18 Identities=6% Similarity=-0.005 Sum_probs=13.5
Q ss_pred CcCCCCCCCCHHHHHHHH
Q psy925 2 NRAEMSSDEPLADVVKHV 19 (69)
Q Consensus 2 ~g~~Py~~~~~~~i~~~v 19 (69)
+...||...+..++...+
T Consensus 32 ~~~~PYG~ks~~~i~~~~ 49 (251)
T TIGR00067 32 TKRFPYGEKSPEFILEYV 49 (251)
T ss_pred CCCCCCCCCCHHHHHHHH
Confidence 357899998888776654
No 487
>TIGR01589 A_thal_3526 uncharacterized plant-specific domain TIGR01589. This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa.
Probab=21.73 E-value=62 Score=14.32 Aligned_cols=14 Identities=0% Similarity=-0.256 Sum_probs=9.7
Q ss_pred HHHHHHHhccCCCC
Q psy925 35 EYEMMRQAWSLQPE 48 (69)
Q Consensus 35 ~~~l~~~cw~~~p~ 48 (69)
+.++|.+|+..--.
T Consensus 4 Vq~lIE~Cl~~yMs 17 (57)
T TIGR01589 4 VQNRIETCIQGYMS 17 (57)
T ss_pred HHHHHHHHHHHHCC
Confidence 56788888865443
No 488
>TIGR00269 conserved hypothetical protein TIGR00269.
Probab=21.53 E-value=1.2e+02 Score=14.76 Aligned_cols=53 Identities=11% Similarity=0.063 Sum_probs=31.8
Q ss_pred CCCCCCCCHHHHHHHH-HcCCCCCCCCCCC-------HHHHHHHHHhccCCCCCCCCHHHHH
Q psy925 4 AEMSSDEPLADVVKHV-EKGYQMEAPEGCP-------PEEYEMMRQAWSLQPELRPTFRQLK 57 (69)
Q Consensus 4 ~~Py~~~~~~~i~~~v-~~g~r~~~p~~~~-------~~~~~l~~~cw~~~p~~Rp~~~~i~ 57 (69)
-.|+--..-.+|...+ ..|. +.....|| .++.+++..-...+|.-+-+|-.-.
T Consensus 4 IRPL~~v~E~ei~~ya~~~~l-p~~~~~CP~~~~a~R~~~k~~L~~LE~~~P~~k~~i~~s~ 64 (104)
T TIGR00269 4 IKPLRYIPEKEVVLYAFLNEL-KVHLDECPYSSLSVRARIRDFLYDLENKKPGVKFSVLRGF 64 (104)
T ss_pred ccccccCCHHHHHHHHHHcCC-CcCCCCCCCCCCCchHHHHHHHHHHHHHCcChHHHHHHHH
Confidence 3566677777777665 3443 33333444 6777888877777776555444433
No 489
>PF13797 Post_transc_reg: Post-transcriptional regulator
Probab=21.29 E-value=1.2e+02 Score=14.53 Aligned_cols=34 Identities=12% Similarity=0.396 Sum_probs=23.0
Q ss_pred CCCCCHHHHHHH-HHhccCCCCCCCCHHHHHHHHHHH
Q psy925 28 PEGCPPEEYEMM-RQAWSLQPELRPTFRQLKAKLLTF 63 (69)
Q Consensus 28 p~~~~~~~~~l~-~~cw~~~p~~Rp~~~~i~~~l~~~ 63 (69)
+.....++++.+ ...|...+. +++.+++..+.++
T Consensus 26 ~~vt~~dlw~yl~~~~WK~~~~--~~l~e~V~DIlsl 60 (87)
T PF13797_consen 26 ESVTEEDLWSYLTEKKWKKKKP--PRLHELVNDILSL 60 (87)
T ss_pred CcCCHHHHHHHHHHHHhccCCC--cCHHHHHHHHHcC
Confidence 355677888777 468987665 6777777655443
No 490
>PF12321 DUF3634: Protein of unknown function (DUF3634); InterPro: IPR022090 This family of proteins is found in bacteria. Proteins in this family are typically between 103 and 114 amino acids in length.
Probab=21.26 E-value=40 Score=16.95 Aligned_cols=23 Identities=13% Similarity=0.358 Sum_probs=18.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcc
Q psy925 22 GYQMEAPEGCPPEEYEMMRQAWS 44 (69)
Q Consensus 22 g~r~~~p~~~~~~~~~l~~~cw~ 44 (69)
|.++....++|..+.+-|.++|.
T Consensus 71 g~rL~fS~~ip~~v~QriRNvfP 93 (108)
T PF12321_consen 71 GVRLHFSRSIPKKVQQRIRNVFP 93 (108)
T ss_pred ceEEEEeCCCCHHHhhhhhhcCC
Confidence 34566678899999999999994
No 491
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=21.14 E-value=1.1e+02 Score=13.98 Aligned_cols=30 Identities=10% Similarity=0.062 Sum_probs=19.4
Q ss_pred HHHHHHhccCCC-CCCCCHHHHHHHHHHHHH
Q psy925 36 YEMMRQAWSLQP-ELRPTFRQLKAKLLTFML 65 (69)
Q Consensus 36 ~~l~~~cw~~~p-~~Rp~~~~i~~~l~~~~~ 65 (69)
.+|+..+|..+. ....+....+..|.+.+.
T Consensus 46 ~~l~~~lw~~~~~~~~~~l~~~I~rLRkkl~ 76 (95)
T cd00383 46 EQLLEAVWGDDYDVDDRTVDVHISRLRKKLE 76 (95)
T ss_pred HHHHHHhcCCCCCCCcccHHHHHHHHHHHhc
Confidence 567778897654 345566666666666554
No 492
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
Probab=20.90 E-value=1.6e+02 Score=15.86 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=20.6
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q psy925 6 MSSDEPLADVVKHVEKGYQMEAPEGCPPEEYEMMR 40 (69)
Q Consensus 6 Py~~~~~~~i~~~v~~g~r~~~p~~~~~~~~~l~~ 40 (69)
|..+.+.++|...+..|.. ....+|+.+.+.|.
T Consensus 155 ~~~~iSST~IR~~~~~g~~--~~~lvp~~V~~yI~ 187 (192)
T cd02165 155 PLLNISSTEIRERLKNGKS--IRYLLPPAVADYIK 187 (192)
T ss_pred CccccCHHHHHHHHHcCCC--hhHhCCHHHHHHHH
Confidence 4456677777777777732 23456777776664
No 493
>KOG1090|consensus
Probab=20.73 E-value=3.6e+02 Score=19.94 Aligned_cols=23 Identities=9% Similarity=0.104 Sum_probs=13.8
Q ss_pred HHHHHHHHHhccCCCCCCCCHHH
Q psy925 33 PEEYEMMRQAWSLQPELRPTFRQ 55 (69)
Q Consensus 33 ~~~~~l~~~cw~~~p~~Rp~~~~ 55 (69)
..+..++..|..-.|..-|+-..
T Consensus 1222 ~sfkkl~kaC~p~~~~~e~~~~S 1244 (1732)
T KOG1090|consen 1222 ASFKKLLKACVPGCPAAEPSPAS 1244 (1732)
T ss_pred HHHHHHHHHhCCCCccCCCCHHH
Confidence 35677888887755554444333
No 494
>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana (Mouse-ear cress) and Oryza sativa (Rice). The function of the proteins are unknown.
Probab=20.51 E-value=27 Score=15.25 Aligned_cols=12 Identities=8% Similarity=0.177 Sum_probs=7.4
Q ss_pred HHHHHHhccCCC
Q psy925 36 YEMMRQAWSLQP 47 (69)
Q Consensus 36 ~~l~~~cw~~~p 47 (69)
.++|.+|+..--
T Consensus 2 q~lIErCl~~yM 13 (54)
T PF09713_consen 2 QNLIERCLQLYM 13 (54)
T ss_pred chHHHHHHHHcC
Confidence 456777776544
No 495
>PF12976 DUF3860: Domain of Unknown Function with PDB structure (DUF3860); InterPro: IPR024619 This protein family includes hypothetical protein (JCVI_PEP_1096688149193) whose crystal structure has been solved PDB:2OD5. The hypothetical protein is from an environmental metagenome (unidentified marine microbe).
Probab=20.30 E-value=1.2e+02 Score=14.37 Aligned_cols=25 Identities=12% Similarity=0.508 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q psy925 14 DVVKHVEKGYQMEAPEGCPPEEYEMMRQ 41 (69)
Q Consensus 14 ~i~~~v~~g~r~~~p~~~~~~~~~l~~~ 41 (69)
+|...+.+..+ |..||+++-+++.+
T Consensus 23 EI~~~~~~~M~---~~s~Pe~~~NiL~~ 47 (92)
T PF12976_consen 23 EISAWLASQMD---PNSCPEDVTNILEA 47 (92)
T ss_pred HHHHHHHhccC---CCCCHHHHHHHHhc
Confidence 45555554444 56778887777643
No 496
>cd08784 Death_DRs Death Domain of Death Receptors. Death domain (DD) found in death receptor proteins. Death receptors are members of the tumor necrosis factor (TNF) receptor superfamily, characterized by having a cytoplasmic DD. Known members of the family are Fas (CD95/APO-1), TNF-receptor 1 (TNFR1/TNFRSF1A/p55/CD120a), TNF-related apoptosis-inducing ligand receptor 1 (TRAIL-R1 /DR4), and receptor 2 (TRAIL-R2/DR5/APO-2/KILLER), as well as Death Receptor 3 (DR3/APO-3/TRAMP/WSL-1/LARD). They are involved in apoptosis signaling pathways. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=20.00 E-value=1.2e+02 Score=14.00 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=21.2
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHHHHH
Q psy925 37 EMMRQAWSLQPELRPTFRQLKAKLLTFM 64 (69)
Q Consensus 37 ~l~~~cw~~~p~~Rp~~~~i~~~l~~~~ 64 (69)
.=|...|...-..+.+...++..|..+-
T Consensus 43 ~~mL~~W~~k~G~~At~~~L~~aL~~~~ 70 (79)
T cd08784 43 YELLRIWRNKEGRKATLNTLIKALKDLD 70 (79)
T ss_pred HHHHHHHHhccCcCcHHHHHHHHHHHcc
Confidence 3345779888888889999888887653
Done!