BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9251
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8SQ21|HINT2_BOVIN Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos
taurus GN=HINT2 PE=2 SV=1
Length = 163
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+YED QC+A+ ++ + AP H+ ++PK +P ++ E++ L GHLLLVA + K
Sbjct: 68 ILYEDQQCLAFRDVAPQ-APVHFLVIPKKPIPRISQAEEEDQQLLGHLLLVAKETAKAEG 126
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L DGYR+ +N+G L Q L++ + ++L WPPG
Sbjct: 127 LGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163
>sp|Q9D0S9|HINT2_MOUSE Histidine triad nucleotide-binding protein 2, mitochondrial OS=Mus
musculus GN=Hint2 PE=2 SV=1
Length = 163
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+YED QC+ + ++ + AP H+ ++P+ +P ++ +++ L GHLLLVA KI +
Sbjct: 68 ILYEDQQCLVFRDVAPQ-APVHFLVIPRKPIPRISQAEEDDQQLLGHLLLVAKKIAQAQG 126
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L DGYR+ VN+G + Q L++ + ++L WPPG
Sbjct: 127 LKDGYRLVVNDGKMGAQSVYHLHIHVLGGRQLQWPPG 163
>sp|Q9BX68|HINT2_HUMAN Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo
sapiens GN=HINT2 PE=1 SV=1
Length = 163
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+YED QC+ + ++ + AP H+ ++PK +P ++ E++ L GHLLLVA + K
Sbjct: 68 ILYEDQQCLVFRDVAPQ-APVHFLVIPKKPIPRISQAEEEDQQLLGHLLLVAKQTAKAEG 126
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L DGYR+ +N+G L Q L++ + ++L WPPG
Sbjct: 127 LGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163
>sp|P32084|Y1390_SYNE7 Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1
Length = 114
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+YED C+A+ ++ + AP H ++PK + N+ AE++ L GHLLL I
Sbjct: 19 IVYEDDLCLAFRDVAPQ-APVHILVIPKQPIANLLEATAEHQALLGHLLLTVKAIAAQEG 77
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
LT+GYR +N GP Q L++ + + L WPPG
Sbjct: 78 LTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114
>sp|P53795|HINT_CAEEL Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis
elegans GN=hint-1 PE=4 SV=1
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
II+ED + +A+ ++ + AP H+ ++PK + + + + L G L++ A K+ K +
Sbjct: 35 IIFEDDEALAFHDVSPQ-APIHFLVIPKRRIDMLENAVDSDAALIGKLMVTASKVAKQLG 93
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
+ +GYR+ VNNG Q L+L + ++L WPPG
Sbjct: 94 MANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130
>sp|P73481|YHIT_SYNY3 Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr1234 PE=4 SV=1
Length = 114
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 23 TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM 82
I+YED C+A++++ + AP H L+PK +P ++ E+ L GHLLL A ++ +
Sbjct: 18 AIVYEDDLCLAFKDVNPQ-APVHVLLIPKKPLPQLSAATPEDHALLGHLLLKAKEVAADL 76
Query: 83 NLTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
+ D +R+ +NNG Q L+L I + WPPG
Sbjct: 77 GIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114
>sp|P62958|HINT1_BOVIN Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1
PE=1 SV=2
Length = 126
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
IIYED QC+A+ ++ + AP H+ ++PK + ++ ++++L GHL++V K +
Sbjct: 31 IIYEDDQCLAFHDISPQ-APTHFLVIPKKYISQISAAEDDDESLLGHLMIVGKKCAADLG 89
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L GYR+ VN G Q ++L + +++ WPPG
Sbjct: 90 LKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126
>sp|Q5RF69|HINT1_PONAB Histidine triad nucleotide-binding protein 1 OS=Pongo abelii
GN=HINT1 PE=2 SV=3
Length = 126
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
II+ED +C+A+ ++ + AP H+ ++PK ++ ++ +N++L GHL++V K +
Sbjct: 31 IIFEDDRCLAFHDISPQ-APTHFLVIPKKHISQISVAEDDNESLLGHLMIVGKKCAADLG 89
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L GYR+ VN G Q ++L + +++ WPPG
Sbjct: 90 LNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
>sp|P80912|HINT1_RABIT Histidine triad nucleotide-binding protein 1 OS=Oryctolagus
cuniculus GN=HINT1 PE=1 SV=2
Length = 126
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
II+ED QC+A+ ++ + AP H+ ++PK ++ ++ +++L GHL++V K +
Sbjct: 31 IIFEDDQCLAFHDISPQ-APTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLG 89
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L GYR+ VN G Q ++L + +++ WPPG
Sbjct: 90 LKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126
>sp|P62959|HINT1_RAT Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus
GN=Hint1 PE=1 SV=5
Length = 126
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
II+ED +C+A+ ++ + AP H+ ++PK ++ ++ ++++L GHL++V K +
Sbjct: 31 IIFEDDRCLAFHDISPQ-APTHFLVIPKKHISQISVADDDDESLLGHLMIVGKKCAADLG 89
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L GYR+ VN G Q ++L + +++ WPPG
Sbjct: 90 LKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
>sp|P70349|HINT1_MOUSE Histidine triad nucleotide-binding protein 1 OS=Mus musculus
GN=Hint1 PE=1 SV=3
Length = 126
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
II+ED +C+A+ ++ + AP H+ ++PK ++ ++ ++++L GHL++V K +
Sbjct: 31 IIFEDDRCLAFHDISPQ-APTHFLVIPKKHISQISVADDDDESLLGHLMIVGKKCAADLG 89
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L GYR+ VN G Q ++L + +++ WPPG
Sbjct: 90 LKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
>sp|P49773|HINT1_HUMAN Histidine triad nucleotide-binding protein 1 OS=Homo sapiens
GN=HINT1 PE=1 SV=2
Length = 126
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
II+ED +C+A+ ++ + AP H+ ++PK ++ ++ ++++L GHL++V K +
Sbjct: 31 IIFEDDRCLAFHDISPQ-APTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLG 89
Query: 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L GYR+ VN G Q ++L + +++ WPPG
Sbjct: 90 LNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
>sp|P42856|ZB14_MAIZE 14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1
Length = 128
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 23 TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENK--TLYGHLLLVAGKITK 80
T++YED + +A+ ++ + AP H ++PK AE + + G+LL VA + K
Sbjct: 30 TVVYEDEKVLAFRDINPQ-APTHILIIPKVKDGLTGLAKAEERHIEILGYLLYVAKVVAK 88
Query: 81 MMNLTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L DGYR+ +N+GP Q +++ + +++ WPPG
Sbjct: 89 QEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 128
>sp|O66536|YHIT_AQUAE Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus (strain
VF5) GN=aq_141 PE=4 SV=1
Length = 121
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 25 IYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM-- 82
+YED + +A+ ++ + VAP H ++PK ++ + L E++ L GH+ VA KI + +
Sbjct: 21 VYEDDKVLAFHDI-NPVAPVHILIIPKKHIMGIQTLEPEDECLVGHMFYVARKIAEDLGI 79
Query: 83 ----NLTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
NL GYR+ N G A Q L+L + + + WPPG
Sbjct: 80 APDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121
>sp|P42855|ZB14_BRAJU 14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1
Length = 113
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 23 TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENK--TLYGHLLLVAGKITK 80
T++YED + +A+ ++ + P H L+PK AE + + G LL A + K
Sbjct: 15 TVVYEDDKVLAFRDITPQ-GPVHILLIPKVRDGLTGLFKAEERHIDILGRLLYTAKLVAK 73
Query: 81 MMNLTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
L +G+RI +N+GP Q +++ + +++ WPPG
Sbjct: 74 QEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113
>sp|Q23921|PKIA_DICDI Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2
Length = 127
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 26 YEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNM----NYLIAENKTLYGHLLLVAGKITKM 81
Y+D CIA E++ + AP H ++PK V + N + + K GH++ KI +
Sbjct: 31 YDDEYCIAIEDINPQ-APVHLLVIPKLAVGGLSDVANVDLEKYKESMGHIM---SKIHHI 86
Query: 82 MNL--TDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120
+L D YR+ +N G L +Q WL++ I +++ WPPG
Sbjct: 87 ASLKGADSYRLVINEGVLGQQSVRWLHIHILGGRQMNWPPG 127
>sp|Q8K9I9|YHIT_BUCAP Uncharacterized HIT-like protein BUsg_345 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_345 PE=4
SV=1
Length = 115
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
IIY+D A+E++ K AP H ++P + +N + +NK ++ H+L +A KI K
Sbjct: 20 IIYQDKIVTAFEDIAPK-APIHIIVIPNIFIKTLNDINQKNKNIFAHMLYIAVKIAKNKK 78
Query: 84 LT-DGYRIHVNNGPLAEQFYDWLYLDIFADKRL 115
++ DGY+I +N Q ++L++ + ++L
Sbjct: 79 ISEDGYKIVMNCNKNGGQEINYLHMHLLGGEKL 111
>sp|P57438|YHIT_BUCAI Uncharacterized HIT-like protein BU357 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=BU357 PE=4
SV=1
Length = 114
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 23 TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM 82
I+Y+D + A+E++ K AP H ++P + + + N + +NK + H+ +A KI K
Sbjct: 18 NIVYQDKKITAFEDIKPK-APVHILIIPNFFISSSNDINKKNKWIMSHMFYIAVKIAKQK 76
Query: 83 NLT-DGYRIHVNNGPLAEQFYDWLYLDIFADKRL 115
+ +GYRI +N Q ++L++ + K+L
Sbjct: 77 KINQEGYRIIINCNEYGGQEINYLHMHLLGGKKL 110
>sp|O07817|HITA_NEIGO Protein HitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1
Length = 107
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 25 IYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNL 84
+YED + + ++++ + AP H L+PK + ++ + E++ L G ++L +I K L
Sbjct: 19 VYEDGEMVCFKDI-NPAAPLHLLLIPKVHFDSLAHAAPEHQPLLGKMMLKVPEIAKASGL 77
Query: 85 TDGYRIHVNNGPLAEQFYDWLYLDIFA 111
TDG++ +N G Q L++ I
Sbjct: 78 TDGFKTLINTGKGGGQEVFHLHIHIMG 104
>sp|Q89AG5|YHIT_BUCBP Uncharacterized HIT-like protein bbp_327 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_327 PE=4
SV=1
Length = 112
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
IIY+D + A+ ++ + +AP H +VP + ++N + NK + G++L ++ KI K
Sbjct: 18 IIYQDKEITAFHDI-NPIAPIHILVVPNLLIKSLNEINENNKHILGNMLYISIKIAKKFK 76
Query: 84 L-TDGYRIHVNNGPLAEQFYDWLYLDIFADKRL 115
+ +GYR+ +N Q L+L + K+L
Sbjct: 77 IDKNGYRLIINCNQHGRQEIQHLHLHLLGGKKL 109
>sp|Q9Z863|YHIT_CHLPN HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 OS=Chlamydia
pneumoniae GN=CPn_0488 PE=4 SV=1
Length = 110
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 25 IYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNL 84
++E+ IA ++ + + AP H ++PK +P + + L + ++ +
Sbjct: 17 VFENENFIAIKDRFPQ-APVHLLIIPKKPIPRFQDIPGDEMILMAEAGKIVQELAAEFGI 75
Query: 85 TDGYRIHVNNGPLAEQFYDWLYLDIFADKRLG 116
DGYR+ +NNG Q L++ + + LG
Sbjct: 76 ADGYRVVINNGAEGGQAVFHLHIHLLGGRPLG 107
>sp|Q9PK09|Y664_CHLMU Uncharacterized HIT-like protein TC_0664 OS=Chlamydia muridarum
(strain MoPn / Nigg) GN=TC_0664 PE=4 SV=1
Length = 126
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 25 IYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM-- 82
++ED I ++ + + AP H ++PK ++ + + +++ +L AGKI ++M
Sbjct: 33 VFEDENFIVIKDKFPQ-APVHLLIIPKKHIEKLQDMQSDDFSLLSE----AGKIIQLMAR 87
Query: 83 --NLTDGYRIHVNNG 95
+ +GYR+ +NNG
Sbjct: 88 DFGIENGYRVVINNG 102
>sp|O84390|YHIT_CHLTR Uncharacterized HIT-like protein CT_385 OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=CT_385 PE=4 SV=1
Length = 111
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 25 IYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM-- 82
++ED I ++ + + AP H ++PK ++ + + ++ L AGKI ++M
Sbjct: 18 VFEDENFIVIKDKFPQ-APVHLLIIPKKHIEKLQDIQGDDFLLLAE----AGKIIQLMAR 72
Query: 83 --NLTDGYRIHVNNG 95
+ +GYR+ VNNG
Sbjct: 73 NFGIENGYRVVVNNG 87
>sp|P0ACE9|HINT_SHIFL HIT-like protein HinT OS=Shigella flexneri GN=hinT PE=4 SV=1
Length = 119
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+Y+D A+ ++ + AP H ++P +P +N + AE++ G ++ VA KI +
Sbjct: 19 IVYQDDLVTAFRDISPQ-APTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEG 77
Query: 84 LT-DGYRIHVNNGPLAEQFYDWLYLDIFADKRLG 116
+ DGYR+ +N Q +++ + + LG
Sbjct: 78 IAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLG 111
>sp|P0ACE7|HINT_ECOLI HIT-like protein HinT OS=Escherichia coli (strain K12) GN=hinT PE=1
SV=1
Length = 119
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+Y+D A+ ++ + AP H ++P +P +N + AE++ G ++ VA KI +
Sbjct: 19 IVYQDDLVTAFRDISPQ-APTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEG 77
Query: 84 LT-DGYRIHVNNGPLAEQFYDWLYLDIFADKRLG 116
+ DGYR+ +N Q +++ + + LG
Sbjct: 78 IAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLG 111
>sp|P0ACE8|HINT_ECO57 HIT-like protein HinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1
Length = 119
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMN 83
I+Y+D A+ ++ + AP H ++P +P +N + AE++ G ++ VA KI +
Sbjct: 19 IVYQDDLVTAFRDISPQ-APTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEG 77
Query: 84 LT-DGYRIHVNNGPLAEQFYDWLYLDIFADKRLG 116
+ DGYR+ +N Q +++ + + LG
Sbjct: 78 IAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLG 111
>sp|P26724|YHIT_AZOBR Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region
OS=Azospirillum brasilense PE=4 SV=1
Length = 122
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 42 APFHYKLVPKYNVPNMNYLIAE-NKTLYGHLLLVAGKITKMMNLTD-GYRIHVNNGPLAE 99
AP H ++PK +M+ A + L G++ + + GYRI N G A
Sbjct: 40 APTHILVIPKGAYVDMDDFSARATEAEIAGLFRAVGEVARGAGAAEPGYRILSNCGEDAN 99
Query: 100 QFYDWLYLDIFADKRLG 116
Q L++ +FA +RLG
Sbjct: 100 QEVPHLHIHVFAGRRLG 116
>sp|O94586|HNT1_SCHPO Hit family protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hnt1 PE=3 SV=1
Length = 133
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 24 IIYEDTQCIAWEEM-----YHKVAPF---HYKLVPKYNVPNMNYLIAENKTLYGHLLLVA 75
I+ D C+ E + +AP H ++PK + M+ L E+ +L +
Sbjct: 8 IVKGDIPCVKLAETALSLAFLDIAPTSKGHALVIPKEHAAKMHELSDES---CADILPLV 64
Query: 76 GKITKMMNLTDGYRIHVNNGPLAEQFYDWLYLDIFADKR------LGWP 118
K+TK + + Y + NNG +A QF D ++ I +GWP
Sbjct: 65 KKVTKAIG-PENYNVLQNNGRIAHQFVDHVHFHIIPKPNEEYGLGVGWP 112
>sp|Q9V4F9|MED26_DROME Mediator of RNA polymerase II transcription subunit 26
OS=Drosophila melanogaster GN=MED26 PE=1 SV=2
Length = 1483
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 25 IYEDTQCIAWEEMY---HKVAPFHYKLVPKYNVPNMN 58
++ED C+A + Y +KV FH + Y +PN+N
Sbjct: 773 VHEDPDCLARQRFYIQTNKVTSFHINALHNYYIPNIN 809
>sp|P32083|YHIT_MYCHR Uncharacterized 13.1 kDa HIT-like protein in P37 5'region
OS=Mycoplasma hyorhinis PE=4 SV=1
Length = 111
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 23 TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM 82
TI+YED + IA+ + Y H+ +VPK N+ + I++ Y L+V + +
Sbjct: 20 TILYEDDKVIAFLDKYAHTKG-HFLVVPKNYSRNL-FSISDEDLSY---LIVKAREFALQ 74
Query: 83 NL----TDGYRIHVNNGPLAEQ 100
+ G+++ +NN P AEQ
Sbjct: 75 EIKKLGATGFKLLINNEPDAEQ 96
>sp|B0KM00|SAHH_PSEPG Adenosylhomocysteinase OS=Pseudomonas putida (strain GB-1) GN=ahcY
PE=3 SV=1
Length = 469
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 33 AWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNLTDGYRIHV 92
AWEE+ +V H ++ N +YLI LL G++ + N T G+ +
Sbjct: 338 AWEEVKPQVHKIHRTGAGSFDPQNDDYLI----------LLAEGRLVNLGNAT-GHPSRI 386
Query: 93 NNGPLAEQ------FYDWLYLDIFADKR 114
+G A Q ++ Y D+ A+K+
Sbjct: 387 MDGSFANQVLAQIFLFEQKYADLSAEKK 414
>sp|Q2YDJ4|HINT3_BOVIN Histidine triad nucleotide-binding protein 3 OS=Bos taurus GN=HINT3
PE=2 SV=1
Length = 182
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 41 VAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNLTD 86
AP HY +VPK + N YL + L +++ V I + N TD
Sbjct: 80 AAPHHYLVVPKKHFENCKYLKKDQIELIENMVTVGKAILERNNFTD 125
>sp|Q6CL17|VPS27_KLULA Vacuolar protein sorting-associated protein 27 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=VPS27 PE=3 SV=1
Length = 603
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 23 TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMM 82
T + EDTQ +++Y KV P +NY +++ + Y + + KI+ +M
Sbjct: 364 TAVLEDTQL---QQLYQKVLGVR---------PKLNYALSDTVSKYNTVYEMNSKISDIM 411
Query: 83 NLTDGY-RIHVNNGPLAEQF 101
N+ D + + N L++Q+
Sbjct: 412 NMYDSMLEMQLRNISLSQQY 431
>sp|P61802|APTX_CIOIN Aprataxin OS=Ciona intestinalis GN=APTX PE=2 SV=1
Length = 380
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 24 IIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKI 78
++ ED Q + ++ Y K A +H+ ++PK ++ + L +N L H+L V ++
Sbjct: 219 VVKEDEQIVVIKDKYPK-AKYHWLILPKDSISSTKNLSTDNIELLKHILKVGQEL 272
>sp|Q6FMN0|SDS23_CANGA Protein SDS23 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SDS23 PE=3 SV=1
Length = 548
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 35 EEMYHKVAPFHYKLVPKYNVP-NMNYLIAENKTLYGHLLLVAGKIT 79
EE ++ + +H +P VP +MN L + L +LLLV KIT
Sbjct: 156 EETFNTLIKYHLTSIPVEAVPGDMNCLTFDYNDLNSYLLLVLNKIT 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,043,954
Number of Sequences: 539616
Number of extensions: 1861376
Number of successful extensions: 3993
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3953
Number of HSP's gapped (non-prelim): 39
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)