Query psy9251
Match_columns 121
No_of_seqs 115 out of 1208
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 22:43:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1c_A Histidine triad nucleot 100.0 7.4E-41 2.5E-45 227.8 10.7 114 6-120 13-126 (126)
2 3n1s_A HIT-like protein HINT; 100.0 4.6E-39 1.6E-43 217.1 11.5 113 7-120 2-115 (119)
3 3oj7_A Putative histidine tria 100.0 2.5E-38 8.5E-43 212.5 11.4 112 6-119 5-116 (117)
4 4egu_A Histidine triad (HIT) p 100.0 8.4E-37 2.9E-41 205.4 10.2 111 7-118 3-114 (119)
5 1xqu_A HIT family hydrolase; p 100.0 2.4E-36 8.2E-41 210.8 11.2 111 8-119 35-146 (147)
6 3ksv_A Uncharacterized protein 100.0 1.1E-33 3.8E-38 197.6 11.1 103 7-113 10-115 (149)
7 3lb5_A HIT-like protein involv 100.0 2.2E-32 7.4E-37 193.2 12.1 107 5-113 25-132 (161)
8 3imi_A HIT family protein; str 100.0 2.3E-32 7.9E-37 190.1 9.5 106 7-114 8-114 (147)
9 3o0m_A HIT family protein; ssg 100.0 4.6E-32 1.6E-36 189.0 10.9 104 8-113 5-110 (149)
10 3l7x_A SMU.412C, putative HIT- 100.0 1.3E-31 4.3E-36 191.3 12.0 106 7-114 35-141 (173)
11 2eo4_A 150AA long hypothetical 100.0 9.3E-31 3.2E-35 182.0 10.7 102 10-113 1-103 (149)
12 1y23_A HIT, histidine triad pr 100.0 3.7E-31 1.3E-35 183.0 8.3 104 8-113 5-109 (145)
13 3r6f_A HIT family protein; str 100.0 3.7E-31 1.3E-35 181.7 8.0 98 7-113 5-102 (135)
14 3ano_A AP-4-A phosphorylase; d 100.0 1.9E-29 6.4E-34 185.9 10.0 107 7-114 68-176 (218)
15 3p0t_A Uncharacterized protein 100.0 5.4E-29 1.8E-33 171.2 9.2 100 8-114 5-105 (138)
16 1fit_A FragIle histidine prote 100.0 2.4E-28 8.1E-33 169.5 11.0 96 21-118 12-108 (147)
17 1ems_A Nitfhit, NIT-fragIle hi 99.9 1.3E-26 4.3E-31 184.1 11.7 110 3-117 292-403 (440)
18 2oik_A Histidine triad (HIT) p 99.9 4.5E-26 1.6E-30 159.2 11.3 99 5-114 7-106 (154)
19 1z84_A Galactose-1-phosphate u 99.9 6.2E-25 2.1E-29 171.3 11.3 102 8-114 214-320 (351)
20 1gup_A Galactose-1-phosphate u 99.9 7E-25 2.4E-29 170.8 9.3 103 8-111 194-301 (348)
21 3ohe_A Histidine triad (HIT) p 99.9 1.2E-21 4.2E-26 134.8 11.1 87 21-114 12-99 (137)
22 3i24_A HIT family hydrolase; s 99.9 2.3E-21 7.8E-26 135.3 11.0 91 21-118 12-105 (149)
23 3sp4_A Aprataxin-like protein; 99.8 4E-21 1.4E-25 139.9 5.6 92 21-114 21-127 (204)
24 3nrd_A Histidine triad (HIT) p 99.8 3E-19 1E-23 122.5 11.1 87 20-114 13-101 (135)
25 3i4s_A Histidine triad protein 99.8 4.5E-18 1.6E-22 118.5 11.2 86 21-114 17-104 (149)
26 3bl9_A Scavenger mRNA-decappin 99.4 3.4E-12 1.2E-16 97.4 11.4 96 15-114 143-249 (301)
27 1vlr_A MRNA decapping enzyme; 99.4 5.6E-12 1.9E-16 97.6 10.9 96 15-114 190-296 (350)
28 1z84_A Galactose-1-phosphate u 98.7 1.3E-07 4.3E-12 73.6 10.6 100 9-112 62-192 (351)
29 2pof_A CDP-diacylglycerol pyro 97.4 0.00037 1.3E-08 51.1 6.3 87 19-110 28-120 (227)
30 1gup_A Galactose-1-phosphate u 96.3 0.039 1.3E-06 42.4 10.0 63 45-111 107-171 (348)
31 3vg8_G Hypothetical protein TT 79.4 2.3 7.8E-05 27.5 3.7 25 85-110 76-100 (116)
32 3hfn_A ASL2047 protein; HFQ, S 38.9 13 0.00043 22.2 1.3 37 16-57 31-68 (72)
33 3hfo_A SSR3341 protein; HFQ, S 36.0 21 0.00073 21.0 2.0 36 16-56 29-65 (70)
34 1wgy_A RAP guanine nucleotide 31.9 26 0.00089 22.3 2.0 39 22-63 60-98 (104)
35 2olw_A Ribosomal large subunit 30.5 17 0.00058 25.6 1.1 17 20-36 30-46 (217)
36 2dhz_A RAP guanine nucleotide 28.1 33 0.0011 22.4 2.0 39 22-63 66-104 (120)
37 1oqk_A Conserved protein MTH11 25.4 60 0.0021 20.1 2.9 30 21-55 35-64 (97)
38 1lgh_B LH II, B800/850, light 24.7 71 0.0024 17.1 2.7 19 55-73 3-21 (45)
39 1ts9_A Ribonuclease P protein 24.5 91 0.0031 19.5 3.6 29 21-55 34-62 (102)
40 2cs7_A Pneumococcal histidine 24.0 1E+02 0.0035 17.2 5.4 27 21-53 14-40 (55)
No 1
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=100.00 E-value=7.4e-41 Score=227.77 Aligned_cols=114 Identities=26% Similarity=0.494 Sum_probs=109.7
Q ss_pred CCCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCCC
Q psy9251 6 FQDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNLT 85 (121)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~~ 85 (121)
-.++|.||++++|++++++|||||.++||.|++ |.+|||+|||||+|++++.+|+++|..++++++.++++++++++.+
T Consensus 13 ~~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~-P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~ 91 (126)
T 3o1c_A 13 PGGDTIFGKIIRKEIPAKIIFEDDQALAFHDIS-PQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK 91 (126)
T ss_dssp TTCSSHHHHHHHTSSCCCEEEECSSEEEEECSS-CSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCcchhhcCCCcCCEEEECCCEEEEECCC-CCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 367899999999999999999999999999999 9999999999999999999999999999999999999999988877
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCCCCCCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~~~~~~~ 120 (121)
+|||+++|+|+.+||+|+|+|+|||||++++||||
T Consensus 92 ~g~ni~~n~g~~agq~v~HlH~Hiipr~~~~~~~~ 126 (126)
T 3o1c_A 92 KGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126 (126)
T ss_dssp TCEEEECCCHHHHTCCSSSCCEEEEESSCCCSSCC
T ss_pred CCeEEEEecCCccCCccCEeEEEEeCCcccCCCCC
Confidence 89999999999999999999999999999999997
No 2
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=100.00 E-value=4.6e-39 Score=217.11 Aligned_cols=113 Identities=22% Similarity=0.356 Sum_probs=107.2
Q ss_pred CCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCC-C
Q psy9251 7 QDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNL-T 85 (121)
Q Consensus 7 ~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~-~ 85 (121)
+++|.||++++|++|+++|||||.++||.|++ |.+|||+||+||+|++++.+|+++|..++++++.++++++++.++ +
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~-P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~ 80 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDIS-PQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAE 80 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCChhhhhhcCCCcCCEEEECCCEEEEECCC-CCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 47999999999999999999999999999999 999999999999999999999999999999999999999988665 6
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCCCCCCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPPG 120 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~~~~~~~ 120 (121)
+|||+++|+|+.+||+|+|+|+|||||++++|...
T Consensus 81 ~g~ni~~n~g~~agq~V~HlH~Hiipr~~~~~~~~ 115 (119)
T 3n1s_A 81 DGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLA 115 (119)
T ss_dssp TCEEEEEEEHHHHTCCSSSCCEEEEESSCCCCSSS
T ss_pred CCeEEEEeCCCCcCCCcCEEEEEEeCCcccCcccc
Confidence 89999999999999999999999999999998654
No 3
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=100.00 E-value=2.5e-38 Score=212.49 Aligned_cols=112 Identities=27% Similarity=0.470 Sum_probs=103.1
Q ss_pred CCCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCCC
Q psy9251 6 FQDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNLT 85 (121)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~~ 85 (121)
-.|+|.||.+++++.+.++|||||.++||.|++ |.+|||+||+||+|++++.+|+++|.+++++++.++++++++ ++.
T Consensus 5 m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~-P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~-~~~ 82 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIPSTIVYEDDEIFAFKDIN-PIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKK-ECP 82 (117)
T ss_dssp ----CHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHH-HCT
T ss_pred cCCCCcccccccCCCCCCEEEECCcEEEEECCC-CCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 456799999999999999999999999999999 999999999999999999999999999999999999998887 444
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCCCCCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPP 119 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~~~~~~ 119 (121)
+|||+++|+|+.+||+|+|+|+|||||++++||.
T Consensus 83 ~g~ni~~n~g~~agq~v~H~H~Hiipr~~~~~~~ 116 (117)
T 3oj7_A 83 EGYRVVNNIGEDAGQTVKHIHFHILGGKKLAWDK 116 (117)
T ss_dssp TCEEEECCCSTTTTCCSSSCCEEEEESSCCCCCC
T ss_pred CCeEEEEcCCCCCCeeeeEEEEEEeCCCCCCCCC
Confidence 5999999999999999999999999999999986
No 4
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=100.00 E-value=8.4e-37 Score=205.43 Aligned_cols=111 Identities=24% Similarity=0.321 Sum_probs=104.4
Q ss_pred CCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCC-C
Q psy9251 7 QDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNL-T 85 (121)
Q Consensus 7 ~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~-~ 85 (121)
+++|.||.+++++++.++|||||.++||.|++ |.+|||+||+||+|++++.+|+++|..++++++.+++++++.++. +
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~-P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~ 81 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLN-PVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQ 81 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCC-CCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999999999 999999999999999999999999999999999999999888764 5
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCCCCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKRLGWP 118 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~~~~~ 118 (121)
+|||+++|+|+.+||+|+|+|+||||+.+++|-
T Consensus 82 ~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~~~ 114 (119)
T 4egu_A 82 TGFRVINNCGSDGGQEVKHLHYHILAGKKLPNY 114 (119)
T ss_dssp HCEEEEEEETTTTTCCSCSCCEEEEESSCCCCG
T ss_pred CCEEEEEeCCCCCCCCcCEEEEEEeCCcccCcc
Confidence 699999999999999999999999999999853
No 5
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=100.00 E-value=2.4e-36 Score=210.83 Aligned_cols=111 Identities=23% Similarity=0.307 Sum_probs=106.8
Q ss_pred CCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCC-CC
Q psy9251 8 DRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNL-TD 86 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~-~~ 86 (121)
++|.||.+++++++.++|||||.++||.|++ |.+|||+||+||+|+.++.+|+++|.+++++++.+++++.+.++. ++
T Consensus 35 ~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~-P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 113 (147)
T 1xqu_A 35 ENCVFCKIIKRELPSTIYYEDERVIAIKDIN-PAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 113 (147)
T ss_dssp TTCHHHHHHTTSSCBCEEEECSSEEEEECSS-CSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCCcccccccCCCCcEEEEECCcEEEEEecC-CCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6899999999999999999999999999999 999999999999999999999999989999999999999999876 57
Q ss_pred ceEEEEecCCcCCCccceeeEEEecCCCCCCCC
Q psy9251 87 GYRIHVNNGPLAEQFYDWLYLDIFADKRLGWPP 119 (121)
Q Consensus 87 g~~~~~n~g~~agq~v~HlHlHIip~~~~~~~~ 119 (121)
|||+++|+|+.+||+|+|+|+||||+.+++||+
T Consensus 114 gyni~~n~g~~aGq~v~HlHlHiiP~~~~~wp~ 146 (147)
T 1xqu_A 114 GYRLITNCGVAAGQTVFHLHYHLLGGVDMGPKI 146 (147)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEESSCCCSCC
T ss_pred CEEEEEecCcccCCCccEEEEEEeCCCcCCCCC
Confidence 999999999999999999999999999999996
No 6
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=100.00 E-value=1.1e-33 Score=197.58 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=92.1
Q ss_pred CCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCC--
Q psy9251 7 QDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNL-- 84 (121)
Q Consensus 7 ~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~-- 84 (121)
.-+|.||+|++||+|+++|||||.++||.|++ |.+|||+||+||+|++++.+|++++ +.+|+.++++++++++.
T Consensus 10 ~~~~iFc~Ii~geip~~iV~ed~~~~af~d~~-P~~pgH~LViPk~H~~~l~dL~~~e---~~~l~~~~~~v~~~l~~~~ 85 (149)
T 3ksv_A 10 AANCIFCKIIKGDIPCAKVAETSKALAFMDIN-PLSRGHMLVIPKEHASCLHELGMED---AADVGVLLAKASRAVAGPD 85 (149)
T ss_dssp CTTCHHHHHHHTSSCCCEEEECSSEEEEECSS-CSSTTCEEEEESSCCSSGGGSCHHH---HHHHHHHHHHHHHHHHCTT
T ss_pred cccCHHHHHHcCCCCccEEEECCCEEEEECCC-CCCCCEEEEEeChhhhhhhhCCHHH---HHHHHHHHHHHHHHHHHhh
Confidence 46899999999999999999999999999999 9999999999999999999999987 55666666666665532
Q ss_pred -CCceEEEEecCCcCCCccceeeEEEecCC
Q psy9251 85 -TDGYRIHVNNGPLAEQFYDWLYLDIFADK 113 (121)
Q Consensus 85 -~~g~~~~~n~g~~agq~v~HlHlHIip~~ 113 (121)
++|||+++|+|+.+||+|+|+|+||||+.
T Consensus 86 ~~~g~ni~~n~g~~aGq~v~HlHiHiiPR~ 115 (149)
T 3ksv_A 86 GSMQYNVLQNNGSLAHQEVPHVHFHIIPKT 115 (149)
T ss_dssp SCCEEEEEECCSTTTTCCSSSCCEEEEEEC
T ss_pred CCCCEEEEEecCcccCCCCCEEEEEEEecc
Confidence 57999999999999999999999999963
No 7
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.98 E-value=2.2e-32 Score=193.22 Aligned_cols=107 Identities=19% Similarity=0.188 Sum_probs=92.5
Q ss_pred CCCCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcC
Q psy9251 5 QFQDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMN 83 (121)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~ 83 (121)
..+++|.||.+++|++|.++|||||.|+||.|++ |.+|||+|||||+|+.++.+|++++...|..+.+ +++++.+.++
T Consensus 25 ~~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~-P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~ 103 (161)
T 3lb5_A 25 AYDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIM-PQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQ 103 (161)
T ss_dssp CCCTTSHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcccccccCCCCccEEEECCCEEEEECCC-cCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3578999999999999999999999999999999 9999999999999999999999987655555444 3444433344
Q ss_pred CCCceEEEEecCCcCCCccceeeEEEecCC
Q psy9251 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADK 113 (121)
Q Consensus 84 ~~~g~~~~~n~g~~agq~v~HlHlHIip~~ 113 (121)
++|||+++|+|+.+||+|+|+|+||||+.
T Consensus 104 -~~g~ni~~n~g~~aGq~V~HlHiHiiPR~ 132 (161)
T 3lb5_A 104 -ADGITVMQFNEAASQQTVYHLHFHIIPRM 132 (161)
T ss_dssp -CSEEEEEEEESGGGTCCSCSCCEEEEEEC
T ss_pred -CCCEEEEEecCcccCCCCCEEEEEEEccc
Confidence 57999999999999999999999999963
No 8
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.97 E-value=2.3e-32 Score=190.10 Aligned_cols=106 Identities=20% Similarity=0.210 Sum_probs=93.0
Q ss_pred CCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCC
Q psy9251 7 QDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLT 85 (121)
Q Consensus 7 ~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~ 85 (121)
-++|.||.+++|++|.++||||+.++||.|++ |.+|||+||+||+|+.++.+|++++...|..+.+ +++++.+..+ +
T Consensus 8 m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~-p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~-~ 85 (147)
T 3imi_A 8 ADNCIFCKIIDGQILCSKVYEDEHVLAFLDIS-QVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFN-P 85 (147)
T ss_dssp GGGCHHHHHHTTSSCCCEEEECSSEEEEECTT-CSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHC-C
T ss_pred cCCCcCcccccCCCcCCEEEECCCEEEEEcCC-CCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 46899999999999999999999999999999 9999999999999999999999988655555544 4444444445 6
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
+|||+++|+|+.+||+|+|+|+||||+..
T Consensus 86 ~~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 114 (147)
T 3imi_A 86 VGFNLLNNNGEKAGQTVFHFHLHLIPRYG 114 (147)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred CCEEEEEeCCcccCCCcCEEEEEEeCCcc
Confidence 79999999999999999999999999855
No 9
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.97 E-value=4.6e-32 Score=188.98 Aligned_cols=104 Identities=17% Similarity=0.123 Sum_probs=89.8
Q ss_pred CCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHH-HHHHHHHcCC-C
Q psy9251 8 DRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLV-AGKITKMMNL-T 85 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~-~~~~~~~~~~-~ 85 (121)
++|.||.++++++|.++||||+.++||.|++ |.+|||+|||||+|+.++.+|++++...|..+.+. ++.+. +.++ +
T Consensus 5 ~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~-p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~-~~~~~~ 82 (149)
T 3o0m_A 5 MSCVFCAIVSGDAPAIRIYEDENFLGILDIR-PFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAAR-ESGLHA 82 (149)
T ss_dssp TTCHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHH-HSTTCC
T ss_pred CCCccCccccCCCCCCEEEECCCEEEEEcCC-CCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHH-HcCCCC
Confidence 6899999999999999999999999999999 99999999999999999999999886555555442 33332 3323 6
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADK 113 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~ 113 (121)
+|||+++|+|+.+||+|+|+|+||||+.
T Consensus 83 ~~~ni~~n~g~~aGq~v~HlHiHiiPR~ 110 (149)
T 3o0m_A 83 DGNNIAINDGKAAFQTVFHIHLHVVPRR 110 (149)
T ss_dssp SEEEEECCCSGGGTCCSSSCCEEEEEEC
T ss_pred CceEEEEecCCCCCCccceEEEEEECCc
Confidence 7999999999999999999999999964
No 10
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.97 E-value=1.3e-31 Score=191.34 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=93.0
Q ss_pred CCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCC
Q psy9251 7 QDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLT 85 (121)
Q Consensus 7 ~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~ 85 (121)
-++|.||.++++++|.++||||+.++||.|++ |.+|||+|||||+|+.++.+|++++...|..+++ +++++.+..+ +
T Consensus 35 m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~-P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~-~ 112 (173)
T 3l7x_A 35 MNDCLFCKIVAGDIPSSKVYEDEDVLAFLDIS-QATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATK-A 112 (173)
T ss_dssp CTTCHHHHHHHTSSCCCEEEECSSEEEEECTT-CSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHT-C
T ss_pred CCCCcccccccCCCCceEEEECCCEEEEEcCC-CCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 46899999999999999999999999999999 9999999999999999999999988655555544 4455544444 6
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
+|||+++|+|+.+||+|+|+|+||||+..
T Consensus 113 ~g~ni~~n~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 113 DGLNIINNNEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp SEEEEEECCSGGGTCCSCSCCEEEEEECC
T ss_pred CCEEEEEecCcccCCCcCEEEEEEEeccc
Confidence 79999999999999999999999999754
No 11
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.97 E-value=9.3e-31 Score=182.03 Aligned_cols=102 Identities=21% Similarity=0.180 Sum_probs=88.9
Q ss_pred CceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCCce
Q psy9251 10 SSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTDGY 88 (121)
Q Consensus 10 ~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~g~ 88 (121)
|.||.+++++++.++||||+.++||.|++ |.+|||+||+||+|+.++.+|++++...|..+++ +++.+.+..+ ++||
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~-p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~~~ 78 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKY-PVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVK-ADGL 78 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCC-CCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcC-CCCe
Confidence 78999999999999999999999999999 9999999999999999999999988655555554 3444444333 5799
Q ss_pred EEEEecCCcCCCccceeeEEEecCC
Q psy9251 89 RIHVNNGPLAEQFYDWLYLDIFADK 113 (121)
Q Consensus 89 ~~~~n~g~~agq~v~HlHlHIip~~ 113 (121)
|+++|+|+.+||+|+|+|+||||+.
T Consensus 79 ni~~n~g~~~gq~v~HlHiHviPr~ 103 (149)
T 2eo4_A 79 RLLTNIGRSAGQVIFHLHVHIIPTW 103 (149)
T ss_dssp EEECCCSGGGTCCSCSCCEEEEEEC
T ss_pred EEEEecCcCCCCCcCEEEEEEECCc
Confidence 9999999999999999999999964
No 12
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.97 E-value=3.7e-31 Score=182.96 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=91.0
Q ss_pred CCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCC
Q psy9251 8 DRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTD 86 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~ 86 (121)
++|.||.+++++++.++||||+.++||.|++ |.+|||+||+||+|++++.+|++++...|..++. +++.+.+..+ ++
T Consensus 5 ~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~-p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~-~~ 82 (145)
T 1y23_A 5 ENCIFCKIIAGDIPSAKVYEDEHVLAFLDIS-QVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFE-PI 82 (145)
T ss_dssp CCCHHHHHHHTSSCCCEEEECSSEEEEECTT-CSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHC-CS
T ss_pred CCCcCCccccCCCCCCEEEECCCEEEEECCC-CCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 6899999999999999999999999999999 9999999999999999999999988655555544 4444444444 57
Q ss_pred ceEEEEecCCcCCCccceeeEEEecCC
Q psy9251 87 GYRIHVNNGPLAEQFYDWLYLDIFADK 113 (121)
Q Consensus 87 g~~~~~n~g~~agq~v~HlHlHIip~~ 113 (121)
|||+++|+|+.+||+|+|+|+||||+.
T Consensus 83 ~~ni~~n~g~~~g~~v~HlH~HiiPr~ 109 (145)
T 1y23_A 83 GLNTLNNNGEKAGQSVFHYHMHIIPRY 109 (145)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEEC
T ss_pred CEEEEEcCCcCCCCCcCEEEEEEEccc
Confidence 999999999999999999999999964
No 13
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.97 E-value=3.7e-31 Score=181.66 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=88.7
Q ss_pred CCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCCCC
Q psy9251 7 QDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNLTD 86 (121)
Q Consensus 7 ~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~~~ 86 (121)
.++|.||.+++ .+.++|||||.++||.|++ |.+|||+||+||+|+.++.+|++++ +.+|+.++++++++++ ++
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~-p~~pgh~lViPk~H~~~l~dL~~~~---~~~l~~~~~~v~~~~~-~~ 77 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRY-PLSKGHFLVIPKAHHPYLHNYKPEE---LSGVLDTIRHLVQKFG-FE 77 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSS-CSSTTCEEEEESSCCSSGGGSCGGG---GTTHHHHHHHHHHHHT-CC
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCC-CCCCCeEEEEEhhHhCCHhHCCHHH---HHHHHHHHHHHHHHhC-CC
Confidence 36899999998 8999999999999999999 9999999999999999999999987 5666777788888776 46
Q ss_pred ceEEEEecCCcCCCccceeeEEEecCC
Q psy9251 87 GYRIHVNNGPLAEQFYDWLYLDIFADK 113 (121)
Q Consensus 87 g~~~~~n~g~~agq~v~HlHlHIip~~ 113 (121)
|||+++|+|+ ||+|+|+|+||||+.
T Consensus 78 ~~ni~~n~g~--gq~v~HlH~HiiPR~ 102 (135)
T 3r6f_A 78 RYNILQNNGN--HQEVFHVHFHVIPFV 102 (135)
T ss_dssp SEEEECCSSS--SCSSSSCCEEEEECC
T ss_pred CeEEEEEcCC--CCCccEEEEEEeccc
Confidence 8999999999 999999999999964
No 14
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.9e-29 Score=185.90 Aligned_cols=107 Identities=14% Similarity=0.145 Sum_probs=94.9
Q ss_pred CCCCceeccccC-ccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHHHHHHHHHHcCCC
Q psy9251 7 QDRSSILPHHEV-SHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLLVAGKITKMMNLT 85 (121)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~~~~~~~~~~~~~ 85 (121)
.++|.||.++++ +.+.++||||+.|+||.|++ |.+|||+|||||+|+.++.+|++++..+|..++..+.++.+....+
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~-P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~ 146 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLY-PYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRP 146 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSS-CSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccC-CCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 358999999998 48999999999999999999 9999999999999999999999999888888888655555554446
Q ss_pred CceEEEEecCCcCCCcc-ceeeEEEecCCC
Q psy9251 86 DGYRIHVNNGPLAEQFY-DWLYLDIFADKR 114 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v-~HlHlHIip~~~ 114 (121)
+|||+++|+|+.+||+| +|+|+||||+..
T Consensus 147 ~g~ni~~n~G~~aGq~V~~HlHiHIIPR~~ 176 (218)
T 3ano_A 147 HGFNVGLNLGTSAGGSLAEHLHVHVVPRWG 176 (218)
T ss_dssp SEEEEEEEESGGGTCTTTTSCCEEEEEECT
T ss_pred CCEEEEEecCcccCCcccCEEEEEEEcccC
Confidence 79999999999999999 999999999754
No 15
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.96 E-value=5.4e-29 Score=171.15 Aligned_cols=100 Identities=14% Similarity=0.120 Sum_probs=83.1
Q ss_pred CCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCC
Q psy9251 8 DRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTD 86 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~ 86 (121)
.+|.||.+++|++|+++|||||.++||.|++ |.+|||+||+||+|+.++.+|++++...+..+.+ +++.+.+..+ ++
T Consensus 5 ~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~-P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~ 82 (138)
T 3p0t_A 5 MASIFTKIINRELPGRFVYEDDDVVAFLTIE-PMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFR-TE 82 (138)
T ss_dssp HHHHHHHHHTTSSCCCEEEECSSEEEEECSS-CSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CS
T ss_pred CCChhhHHhcCCCCcCEEEeCCCEEEEecCC-CCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 4699999999999999999999999999999 9999999999999999999999987655555444 3444444444 45
Q ss_pred ceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 87 GYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 87 g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
++|+. .+||+|+|+|+||||+..
T Consensus 83 ~~n~~-----~~gq~v~HlH~HiiPr~~ 105 (138)
T 3p0t_A 83 RSGLI-----IAGLEVPHLHVHVFPTRS 105 (138)
T ss_dssp EEEEE-----ECCSSCSSCCEEEEEESC
T ss_pred CCcEE-----ECCcccCEEEEEEecccc
Confidence 77764 369999999999999754
No 16
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.95 E-value=2.4e-28 Score=169.51 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=79.3
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCCceEEEEecCCcCC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTDGYRIHVNNGPLAE 99 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~g~~~~~n~g~~ag 99 (121)
+.++||||+.|+||.|++ |.+|||+||+||+|+.++.+|++++...|..+++ +++.+.+..+ ++|||+++|+|+.+|
T Consensus 12 ~~~iv~e~~~~~a~~d~~-p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~~~ni~~n~g~~ag 89 (147)
T 1fit_A 12 PSVVFLKTELSFALVNRK-PVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFH-GTSLTFSMQDGPEAG 89 (147)
T ss_dssp GGGEEEECSSEEEEECSS-CSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEECCSGGGT
T ss_pred CcEEEEECCCEEEEECCC-CCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEecCCccC
Confidence 478999999999999999 9999999999999999999999988655555444 3333333333 579999999999999
Q ss_pred CccceeeEEEecCCCCCCC
Q psy9251 100 QFYDWLYLDIFADKRLGWP 118 (121)
Q Consensus 100 q~v~HlHlHIip~~~~~~~ 118 (121)
|+|+|+|+||||+...+|+
T Consensus 90 q~v~HlH~HiiPr~~~d~~ 108 (147)
T 1fit_A 90 QTVKHVHVHVLPRKAGDFH 108 (147)
T ss_dssp CCSSSCCEEEEEECTTC--
T ss_pred CCccEEEEEEECCcCCCCC
Confidence 9999999999998776544
No 17
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.94 E-value=1.3e-26 Score=184.14 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=90.7
Q ss_pred CCCCCCCCceeccccCccCc-cEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHH
Q psy9251 3 RSQFQDRSSILPHHEVSHNL-TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITK 80 (121)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~ 80 (121)
++++.++|.||. +++|. ++|||||.++||.|++ |.+|||+||+||+|+.++.+|++++...|..+.+ +++++.+
T Consensus 292 ~~~~~~~c~fc~---~e~p~~~iv~e~~~~~a~~~~~-p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~ 367 (440)
T 1ems_A 292 KSSETGGLKFAR---FNIPADHIFYSTPHSFVFVNLK-PVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEK 367 (440)
T ss_dssp CCCCSSCCEETT---EECCGGGEEEECSSEEEEECSS-CSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCceeeec---cccCCceEEEECCCEEEEEcCC-cCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHh
Confidence 455688999998 67776 6899999999999999 9999999999999999999999988544444444 3333333
Q ss_pred HcCCCCceEEEEecCCcCCCccceeeEEEecCCCCCC
Q psy9251 81 MMNLTDGYRIHVNNGPLAEQFYDWLYLDIFADKRLGW 117 (121)
Q Consensus 81 ~~~~~~g~~~~~n~g~~agq~v~HlHlHIip~~~~~~ 117 (121)
..+ ++|||+++|+|+.+||+|+|+|+||||+.+.+|
T Consensus 368 ~~~-~~~~n~~~~~g~~~gq~v~HlH~Hiipr~~~d~ 403 (440)
T 1ems_A 368 HHN-VTSTTICVQDGKDAGQTVPHVHIHILPRRAGDF 403 (440)
T ss_dssp HTT-CSEEEEECCCSGGGTCCSSSCCEEEEEECSSCC
T ss_pred hcC-CCCeEEEEecCCCCCCCccEEEEEEeCCCCCCC
Confidence 333 579999999999999999999999999877663
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.93 E-value=4.5e-26 Score=159.16 Aligned_cols=99 Identities=11% Similarity=0.185 Sum_probs=81.7
Q ss_pred CCCCCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcC
Q psy9251 5 QFQDRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMN 83 (121)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~ 83 (121)
+..++|.||. +++.++||||+.++||.|++ |.+|||+||+||+|+.++.+|++++...|..+++ +++.+.+..+
T Consensus 7 ~~~~~C~FC~----~~~~~iv~e~~~~~a~~d~~-p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~ 81 (154)
T 2oik_A 7 SFHKNCELCT----TAGGEILWQDALCRVVHVEN-QDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMR 81 (154)
T ss_dssp CCCTTCHHHH----SCCSEEEEECSSEEEEECCC-TTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCccCC----CCCCeEEEECCcEEEEEcCC-CCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4557899997 45789999999999999999 9999999999999999999999998766666555 4444444444
Q ss_pred CCCceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 84 LTDGYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 84 ~~~g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
++|||+. .+||+++|+|+||||+..
T Consensus 82 -~~g~ni~-----~~gq~v~HlHiHiiPr~~ 106 (154)
T 2oik_A 82 -PDKINLA-----SLGNMTPHVHWHVIPRFK 106 (154)
T ss_dssp -CSEEEEE-----ECCSSSCSCEEEEEEECT
T ss_pred -CCcEEhH-----HhCCCCCEEEEEEeCCCC
Confidence 5689986 368999999999999754
No 19
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.92 E-value=6.2e-25 Score=171.34 Aligned_cols=102 Identities=20% Similarity=0.288 Sum_probs=93.6
Q ss_pred CCCceeccccCccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCC
Q psy9251 8 DRSSILPHHEVSHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTD 86 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~ 86 (121)
++|.||.++++++ +|||||.|+||.|++ |.+|||+||+||+|+.++.+|++++...|+.+++ +++++.+..+..
T Consensus 214 ~~ciFc~ii~~E~---iV~E~e~~~af~~~~-p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~- 288 (351)
T 1z84_A 214 GKCCLCEAKSKHF---VIDESSHFVSVAPFA-ATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDP- 288 (351)
T ss_dssp SSCTTTTHHHHSE---EEEECSSEEEEECTT-CSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSC-
T ss_pred CCCHHHHHHhcCe---EEecCCcEEEEeccC-CCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 6899999999988 999999999999999 9999999999999999999999999988998888 667777777754
Q ss_pred ceEEEEecCCcCC----CccceeeEEEecCCC
Q psy9251 87 GYRIHVNNGPLAE----QFYDWLYLDIFADKR 114 (121)
Q Consensus 87 g~~~~~n~g~~ag----q~v~HlHlHIip~~~ 114 (121)
|||+++|+|+.+| |+++|+|+||+|+.+
T Consensus 289 ~yn~~~n~gp~~g~~~~q~v~HlHiHiiPR~~ 320 (351)
T 1z84_A 289 PYNYMIHTSPLKVTESQLPYTHWFLQIVPQLS 320 (351)
T ss_dssp CEEEEEECCCTTCCGGGGGGCCCEEEEEECCC
T ss_pred CEEEEEeCCCccCCCCCCccceEEEEEEccCC
Confidence 9999999999886 799999999999753
No 20
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.91 E-value=7e-25 Score=170.78 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=93.5
Q ss_pred CCCceeccccCccCc--cEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCC
Q psy9251 8 DRSSILPHHEVSHNL--TIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNL 84 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~--~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~ 84 (121)
++|.||.+++++++. ++|||||.++||.|++ |.+|||+||+||+|+.++.+|++++...|+.+++ +++++.+..+.
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~-p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~ 272 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYW-AAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQC 272 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTT-CCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccC-CCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 789999999999877 9999999999999999 9999999999999999999999999888888776 67777777775
Q ss_pred CCceEEEEecCCcC--CCccceeeEEEec
Q psy9251 85 TDGYRIHVNNGPLA--EQFYDWLYLDIFA 111 (121)
Q Consensus 85 ~~g~~~~~n~g~~a--gq~v~HlHlHIip 111 (121)
+.+||+++|.++.. +|+++|+|+||+|
T Consensus 273 ~~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 273 SFPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 44999999999875 4899999999999
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.87 E-value=1.2e-21 Score=134.79 Aligned_cols=87 Identities=9% Similarity=0.023 Sum_probs=73.6
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHH-HHHHHHHHHHHcCCCCceEEEEecCCcCC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGH-LLLVAGKITKMMNLTDGYRIHVNNGPLAE 99 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~-l~~~~~~~~~~~~~~~g~~~~~n~g~~ag 99 (121)
...+|+|++.++++++.+ |.+|||+||+||+|++++.+|++++...+.. +..+++.+.+..+ ++|+|++ .+|
T Consensus 12 d~~~v~~~~~~~v~l~~~-p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~-----~aG 84 (137)
T 3ohe_A 12 DTHKLGESRLCDVLLMND-NTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFG-GDKMNVA-----ALG 84 (137)
T ss_dssp HEEEEEECSSEEEEEESC-TTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEE-----ECC
T ss_pred ccEEEEECCcEEEEEcCC-CCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEe-----ecc
Confidence 467999999999999999 9999999999999999999999988654444 4446777777666 5788876 579
Q ss_pred CccceeeEEEecCCC
Q psy9251 100 QFYDWLYLDIFADKR 114 (121)
Q Consensus 100 q~v~HlHlHIip~~~ 114 (121)
|+|+|+|+|||||..
T Consensus 85 q~V~HlH~HviPR~~ 99 (137)
T 3ohe_A 85 NMVPQLHLHHIVRYQ 99 (137)
T ss_dssp SSCCSCCEEEEEECT
T ss_pred CcCCEEEEEEeCCCC
Confidence 999999999999753
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.86 E-value=2.3e-21 Score=135.29 Aligned_cols=91 Identities=12% Similarity=0.152 Sum_probs=75.1
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChhHHHHHHH-HHHHHHHHHHHcCCCCceEEEEecCCcCC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAENKTLYGH-LLLVAGKITKMMNLTDGYRIHVNNGPLAE 99 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~~~~~l~~-l~~~~~~~~~~~~~~~g~~~~~n~g~~ag 99 (121)
.+.+|++++.++||++.+ |.+|||+||+||+|++++.+|++++...+.. +..+++.+.+..+ ++|+|++ .+|
T Consensus 12 d~~~v~~~~~~~v~L~~~-p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~-~~~~Ni~-----~aG 84 (149)
T 3i24_A 12 DCIVLGNLPLCKVLLIKE-DIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFS-PDKINIG-----ALG 84 (149)
T ss_dssp HEEEEEECSSEEEEEECB-SSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHC-CSEEEEE-----ECC
T ss_pred CCEEEEECCCEEEEEcCC-CCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEh-----hhh
Confidence 467999999999999999 9999999999999999999999988654444 4446777777666 5688876 379
Q ss_pred CccceeeEEEecCCC--CCCC
Q psy9251 100 QFYDWLYLDIFADKR--LGWP 118 (121)
Q Consensus 100 q~v~HlHlHIip~~~--~~~~ 118 (121)
|+|+|+|+|||||.. ..||
T Consensus 85 q~V~HlH~HvIPR~~~D~~~~ 105 (149)
T 3i24_A 85 NLVPQLHIHHIARFTTDVAWP 105 (149)
T ss_dssp SSCCSCCEEEEEECTTSTTTT
T ss_pred CCCCEEEEEEeCCccCCCCCC
Confidence 999999999999754 2355
No 23
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.83 E-value=4e-21 Score=139.86 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=73.7
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCCh---hHHHHHHHHHHHHH-H-HHHHc--------CCC--
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIA---ENKTLYGHLLLVAG-K-ITKMM--------NLT-- 85 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~---~~~~~l~~l~~~~~-~-~~~~~--------~~~-- 85 (121)
|. +|||||.++||.|++ |.++||+|||||+|+.++.++++ ++.+++.+|..++. + +++.. +++
T Consensus 21 p~-~v~edd~~~af~D~~-P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~ 98 (204)
T 3sp4_A 21 KN-VIYYDDDVVLVRDMF-PKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTN 98 (204)
T ss_dssp TT-EEEECSSEEEEECSS-CSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCH
T ss_pred CC-EEEEcCCEEEEeCCC-CCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCc
Confidence 44 999999999999999 99999999999999999887544 34677888888777 5 34332 232
Q ss_pred CceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 86 DGYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 86 ~g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
.||+..++.|.+++|||.|||+|||..+-
T Consensus 99 ~~~~~~i~~GfHa~PSm~HLHLHVIS~Df 127 (204)
T 3sp4_A 99 EALCNYIKVGFHAGPSMNNLHLHIMTLDH 127 (204)
T ss_dssp HHHHTTEEEEEESSCSSSSCCEEEEESCC
T ss_pred CCeeeeEeccCCCCCcccceeEEEeccCC
Confidence 35666777788889999999999999653
No 24
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.81 E-value=3e-19 Score=122.50 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=69.7
Q ss_pred cCccEEEEcCcEEEEEeCCCCCCCeEEEEEec-CCCCCcCCCChhHHHHHHHH-HHHHHHHHHHcCCCCceEEEEecCCc
Q psy9251 20 HNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPK-YNVPNMNYLIAENKTLYGHL-LLVAGKITKMMNLTDGYRIHVNNGPL 97 (121)
Q Consensus 20 ~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk-~Hv~~~~~L~~~~~~~l~~l-~~~~~~~~~~~~~~~g~~~~~n~g~~ 97 (121)
....+|++++.+.++++.+ |.+|| +||||| +|++++.+|++++...+... ..+++.+.+..+ ++|+|++ .
T Consensus 13 ~~~~~v~~~~~~~v~l~~~-~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~-----~ 84 (135)
T 3nrd_A 13 RDGIPIGTLGLCQMRLMND-RRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATG-AEKINIG-----A 84 (135)
T ss_dssp HHEEEEEECSSEEEEEESC-TTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE-----E
T ss_pred cCCEEEEECCcEEEEEcCC-CCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe-----e
Confidence 3567999999999999999 99995 577787 79999999999886544443 336666766666 5688775 5
Q ss_pred CCCccceeeEEEecCCC
Q psy9251 98 AEQFYDWLYLDIFADKR 114 (121)
Q Consensus 98 agq~v~HlHlHIip~~~ 114 (121)
+||+|+|+|+|||||..
T Consensus 85 aGq~V~HlH~HviPR~~ 101 (135)
T 3nrd_A 85 LGNIVRQLHVHVIARRE 101 (135)
T ss_dssp CCSSCCSCCEEEEEECT
T ss_pred ccCCCCEEEEEEecCCC
Confidence 79999999999999754
No 25
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.77 E-value=4.5e-18 Score=118.54 Aligned_cols=86 Identities=13% Similarity=0.035 Sum_probs=65.6
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecC-CCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCCceEEEEecCCcC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKY-NVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTDGYRIHVNNGPLA 98 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~-Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~g~~~~~n~g~~a 98 (121)
...+++|.+.++++.+. +.+++|+|||||+ |++++.+|++++...+..+.. +++.+.+..+ ++|||+. .+
T Consensus 17 d~~~~~e~p~~~v~l~~--~~~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~-~~g~N~~-----~a 88 (149)
T 3i4s_A 17 DTIDIGDLPLSKVLVIK--DANYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITK-CDKLNIA-----AL 88 (149)
T ss_dssp HEEEEEECSSEEEEEES--CTTSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE-----EC
T ss_pred CCEEEEEcCceEEEECC--CCCCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe-----ec
Confidence 35688999999999984 5567799999999 899999999987544444333 4444444444 5788774 57
Q ss_pred CCccceeeEEEecCCC
Q psy9251 99 EQFYDWLYLDIFADKR 114 (121)
Q Consensus 99 gq~v~HlHlHIip~~~ 114 (121)
||+|+|+|+||||+..
T Consensus 89 Gq~V~HlH~HvIPR~~ 104 (149)
T 3i4s_A 89 GNLVPQLHVHIIARRT 104 (149)
T ss_dssp CSSCCSCCEEEEEECT
T ss_pred CCcCCEEEEEEECCcC
Confidence 9999999999999754
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=99.39 E-value=3.4e-12 Score=97.40 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=81.0
Q ss_pred cccC-ccCccEEEEcCc----EEEEEeCC---CCCCCeEEEEEecCC-CCCcCCCChhHHHHHHHHHHHHHHHHHHc-CC
Q psy9251 15 HHEV-SHNLTIIYEDTQ----CIAWEEMY---HKVAPFHYKLVPKYN-VPNMNYLIAENKTLYGHLLLVAGKITKMM-NL 84 (121)
Q Consensus 15 ~~~~-~~~~~iv~e~d~----~va~~d~~---~P~~~gH~LViPk~H-v~~~~~L~~~~~~~l~~l~~~~~~~~~~~-~~ 84 (121)
|+++ +.+.+++|||+. |+++.|+. -|.+.-|+|+||++| +.|+.+|+.++.++|..|...++++.+.. +.
T Consensus 143 Il~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~ 222 (301)
T 3bl9_A 143 ILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRM 222 (301)
T ss_dssp HHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCC
Confidence 4444 567899999988 99999865 267899999999999 99999999999999999999888877654 54
Q ss_pred -CCceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 85 -TDGYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 85 -~~g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
.+.++++++..| |+.|+|+||+...-
T Consensus 223 ~~~~~rlgfHy~P----S~yHLHlHvis~~~ 249 (301)
T 3bl9_A 223 KGDHLRVYLHYLP----SYYHLHVHFTALGF 249 (301)
T ss_dssp CGGGEEEEEESSC----SSSSCEEEEEETTS
T ss_pred ChHHeEEEecCCC----CcceEEEEEEecCC
Confidence 467999988765 89999999998653
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=99.36 E-value=5.6e-12 Score=97.61 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=78.9
Q ss_pred cccC-ccCccEEEEcCc----EEEEEeCC---CCCCCeEEEEEecCC-CCCcCCCChhHHHHHHHHHHHHHHHHHHc-CC
Q psy9251 15 HHEV-SHNLTIIYEDTQ----CIAWEEMY---HKVAPFHYKLVPKYN-VPNMNYLIAENKTLYGHLLLVAGKITKMM-NL 84 (121)
Q Consensus 15 ~~~~-~~~~~iv~e~d~----~va~~d~~---~P~~~gH~LViPk~H-v~~~~~L~~~~~~~l~~l~~~~~~~~~~~-~~ 84 (121)
|+++ +.+.+++|+|+. |++|.|+. -|.+.-|+|+||++| +.|+.+|+.++.++|..|...++++.... ++
T Consensus 190 Il~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~ 269 (350)
T 1vlr_A 190 ILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQV 269 (350)
T ss_dssp HHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCC
Confidence 3444 567899999988 99999865 267899999999998 99999999999999999999888877654 54
Q ss_pred -CCceEEEEecCCcCCCccceeeEEEecCCC
Q psy9251 85 -TDGYRIHVNNGPLAEQFYDWLYLDIFADKR 114 (121)
Q Consensus 85 -~~g~~~~~n~g~~agq~v~HlHlHIip~~~ 114 (121)
.+.++++++..| |++|||+|||...-
T Consensus 270 ~~~~lRlgfHy~P----S~yHLHlHvis~~~ 296 (350)
T 1vlr_A 270 TGDRLRVYLHYLP----SYYHLHVHFTALGF 296 (350)
T ss_dssp CGGGEEEEEESSC----SSSSCEEEEEETTS
T ss_pred ChHHeEEEecCCC----CcceEEEEEEeccC
Confidence 467999988765 89999999998653
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.70 E-value=1.3e-07 Score=73.56 Aligned_cols=100 Identities=10% Similarity=0.034 Sum_probs=73.7
Q ss_pred CCceeccccCccCccEEE-----EcCcEEEEEeCCCCCCC------------e-----------EEEEEecCCCCCcCCC
Q psy9251 9 RSSILPHHEVSHNLTIIY-----EDTQCIAWEEMYHKVAP------------F-----------HYKLVPKYNVPNMNYL 60 (121)
Q Consensus 9 ~~~~~~~~~~~~~~~iv~-----e~d~~va~~d~~~P~~~------------g-----------H~LViPk~Hv~~~~~L 60 (121)
.|-||+-.++..+..+.. .+-.+++|.+.+ |..+ | +++|.+.+|..++.+|
T Consensus 62 ~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~f-P~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~l 140 (351)
T 1z84_A 62 SCPFCIGREQECAPELFRVPDHDPNWKLRVIENLY-PALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDI 140 (351)
T ss_dssp CCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSS-CSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGS
T ss_pred CCcCCCCCcccCCcccccccccCCCceEEEEcCCC-ccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHC
Confidence 699999655554543333 345689999999 9983 4 7899999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCC---CCceEEEEecCCcCCCccceeeEEEecC
Q psy9251 61 IAENKTLYGHLLLVAGKITKMMNL---TDGYRIHVNNGPLAEQFYDWLYLDIFAD 112 (121)
Q Consensus 61 ~~~~~~~l~~l~~~~~~~~~~~~~---~~g~~~~~n~g~~agq~v~HlHlHIip~ 112 (121)
+.++. ..++.+.++-.+.++. ...++++.|-|..+|.|+.|.|.+|+.-
T Consensus 141 s~~e~---~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~ 192 (351)
T 1z84_A 141 DPVGI---GDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMAL 192 (351)
T ss_dssp CHHHH---HHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEE
T ss_pred CHHHH---HHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEec
Confidence 99874 4445543333333332 3477888899999999999999999973
No 29
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=97.39 E-value=0.00037 Score=51.13 Aligned_cols=87 Identities=9% Similarity=0.166 Sum_probs=60.3
Q ss_pred ccCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCC---CChhHHHHHHHHHHHHHHHHHHcCC--C-CceEEEE
Q psy9251 19 SHNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNY---LIAENKTLYGHLLLVAGKITKMMNL--T-DGYRIHV 92 (121)
Q Consensus 19 ~~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~---L~~~~~~~l~~l~~~~~~~~~~~~~--~-~g~~~~~ 92 (121)
-.|+..|.....+++|.| +.-+.|+|+||-..++-+.+ +++.....+......-..+.++.|- + +...+.+
T Consensus 28 p~PC~~Vd~~~gyvvlKD---~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaI 104 (227)
T 2pof_A 28 PSPCAEVKPNAGYVVLKD---LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAI 104 (227)
T ss_dssp CTTSSEEETTTTEEEEEC---SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEE
T ss_pred CCCCceEccCCCEEEEeC---CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEe
Confidence 358889999999999999 55788999999999887776 3333333344433333334555553 3 3566777
Q ss_pred ecCCcCCCccceeeEEEe
Q psy9251 93 NNGPLAEQFYDWLYLDIF 110 (121)
Q Consensus 93 n~g~~agq~v~HlHlHIi 110 (121)
|. ..|.|-.+||+||-
T Consensus 105 NS--~~gRSQnQLHIHIs 120 (227)
T 2pof_A 105 NS--RTGRTQNHFHIHIS 120 (227)
T ss_dssp BC--GGGCSCCSCCEEEE
T ss_pred cC--CCCccccceeeehh
Confidence 64 35788899999985
No 30
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=96.29 E-value=0.039 Score=42.38 Aligned_cols=63 Identities=11% Similarity=-0.038 Sum_probs=42.4
Q ss_pred EEEEEecCCCCCcCCCChhHHHHHHHHHH-HHHHHHHHcCCCCceE-EEEecCCcCCCccceeeEEEec
Q psy9251 45 HYKLVPKYNVPNMNYLIAENKTLYGHLLL-VAGKITKMMNLTDGYR-IHVNNGPLAEQFYDWLYLDIFA 111 (121)
Q Consensus 45 H~LViPk~Hv~~~~~L~~~~~~~l~~l~~-~~~~~~~~~~~~~g~~-~~~n~g~~agq~v~HlHlHIip 111 (121)
-++|.-.+|-.++.+|+.++...+-.+.. -.+++.... .|- +.-|-|+.+|.|..|-|.-|+.
T Consensus 107 ~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~~----~yV~iF~N~G~~~G~Sl~HpH~Qi~a 171 (348)
T 1gup_A 107 RVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTY----PWVQVFENKGAAMGCSNPHPGGQIWA 171 (348)
T ss_dssp EEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHC----SEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred EEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhcC----CEEEEecccCCcCCcCCCCCceeEEe
Confidence 34455569999999999987544444333 334443221 254 4455599999999999999985
No 31
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=79.38 E-value=2.3 Score=27.54 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=20.9
Q ss_pred CCceEEEEecCCcCCCccceeeEEEe
Q psy9251 85 TDGYRIHVNNGPLAEQFYDWLYLDIF 110 (121)
Q Consensus 85 ~~g~~~~~n~g~~agq~v~HlHlHIi 110 (121)
.|..++.+| +.+.|-+++|.|+|+.
T Consensus 76 vDHVdi~~~-~gHpGve~PHyhI~l~ 100 (116)
T 3vg8_G 76 IDHVNMIPS-GPHPGVSEPHYHIELV 100 (116)
T ss_dssp CCEEEEEEC-CCCTTCCSCEEEEEEE
T ss_pred cceEEEecC-CCCCCcccCceEEEEE
Confidence 467888886 6678999999999986
No 32
>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}
Probab=38.87 E-value=13 Score=22.20 Aligned_cols=37 Identities=8% Similarity=0.154 Sum_probs=25.7
Q ss_pred ccCc-cCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCc
Q psy9251 16 HEVS-HNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNM 57 (121)
Q Consensus 16 ~~~~-~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~ 57 (121)
.+|+ +..++.++|.+|+++.+-+ ++-.+|.|..+..+
T Consensus 31 ~tGd~l~G~i~WQD~~cl~L~~~~-----~~~~LI~R~AI~~I 68 (72)
T 3hfn_A 31 VTGDAITGRVLWQDPTCVCIADEN-----SRQTTIWKQAIAYL 68 (72)
T ss_dssp TTSCEEEEEEEEECSSEEEEEC--------CEEEEEGGGEEEE
T ss_pred cCCCEEEEEEEEECCCEEEEEcCC-----CCeEEEEeeeeEEE
Confidence 3453 4678999999999999855 45577778776544
No 33
>3hfo_A SSR3341 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 1.30A {Synechocystis SP}
Probab=36.02 E-value=21 Score=21.04 Aligned_cols=36 Identities=14% Similarity=-0.017 Sum_probs=26.3
Q ss_pred ccCc-cCccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCC
Q psy9251 16 HEVS-HNLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPN 56 (121)
Q Consensus 16 ~~~~-~~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~ 56 (121)
.+|+ +...+.++|.+|+++.+-+ ++-.+|.|..+..
T Consensus 29 ~tG~~l~G~i~WQD~~cl~L~~~~-----~~~~LI~r~AI~~ 65 (70)
T 3hfo_A 29 LTGDSLFGTIRWQDTDGLGLVDDS-----ERSTIVRLAAIAY 65 (70)
T ss_dssp TTSCEEEEEEEEECSSEEEEECTT-----CCEEEEEGGGEEE
T ss_pred cCCCEEEEEEEEeCCCEEEEEcCC-----CCeEEEEeeeeEE
Confidence 3443 4678999999999998854 5666777776653
No 34
>1wgy_A RAP guanine nucleotide exchange factor 5; ubiquitin fold, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=31.90 E-value=26 Score=22.26 Aligned_cols=39 Identities=5% Similarity=-0.090 Sum_probs=28.7
Q ss_pred ccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChh
Q psy9251 22 LTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAE 63 (121)
Q Consensus 22 ~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~ 63 (121)
.+++++.++..++.-+. . .|++.|++|.|+..+.-|+++
T Consensus 60 Ek~~lqp~d~si~tsL~-~--NgRLfvc~kd~~d~LtPlpeq 98 (104)
T 1wgy_A 60 EKHELQPNDLVISKSLE-A--SGRIYVYRKDLADTLNPFAEN 98 (104)
T ss_dssp CCCBCCTTSBSSCCSSC-S--SCEEEEEECCSSSCCCCCCCC
T ss_pred cEeecCCcceEEEeecc-c--cceEEEeehHhcccccCCccc
Confidence 45566666666555544 2 499999999999999988765
No 35
>2olw_A Ribosomal large subunit pseudouridine synthase E; bifurcated beta sheet, isomerase; 1.60A {Escherichia coli}
Probab=30.50 E-value=17 Score=25.60 Aligned_cols=17 Identities=12% Similarity=0.094 Sum_probs=8.4
Q ss_pred cCccEEEEcCcEEEEEe
Q psy9251 20 HNLTIIYEDTQCIAWEE 36 (121)
Q Consensus 20 ~~~~iv~e~d~~va~~d 36 (121)
....|+|||+.++++.-
T Consensus 30 ~~~~Ilyed~~~lvvnK 46 (217)
T 2olw_A 30 TRRKPENQPTRVILFNK 46 (217)
T ss_dssp -------CCCCEEEEEE
T ss_pred ccCceEeeCCcEEEEEC
Confidence 35579999999988864
No 36
>2dhz_A RAP guanine nucleotide exchange factor (GEF)- like 1; LINK guanine nucleotide exchange factor II, LINK-gefii, RA domain, structural genomics; NMR {Homo sapiens}
Probab=28.08 E-value=33 Score=22.37 Aligned_cols=39 Identities=10% Similarity=0.034 Sum_probs=28.9
Q ss_pred ccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCCCcCCCChh
Q psy9251 22 LTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVPNMNYLIAE 63 (121)
Q Consensus 22 ~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~~~~~L~~~ 63 (121)
.+++++.+...++.-+. . .|++.|++|.|+..+.-|+++
T Consensus 66 Ek~vlqp~d~sv~tsL~-~--NgRLfvc~kd~~d~LtPLpEq 104 (120)
T 2dhz_A 66 EKVLLQPTEDCVFTALG-I--NSHLFACTRDSYEALVPLPEE 104 (120)
T ss_dssp CCEECCTTCSCHHHHSC-S--SEEEEEECTTTTTTCCCCCCS
T ss_pred cEeecCCcceEEEeecc-c--cceEEEeehHhcccccCCccc
Confidence 35666666666655544 2 499999999999999988765
No 37
>1oqk_A Conserved protein MTH11; OB fold, archaeal RNAse P protein subunit, hydrolase; NMR {Methanothermobacterthermautotrophicus} SCOP: b.137.1.1
Probab=25.38 E-value=60 Score=20.08 Aligned_cols=30 Identities=17% Similarity=-0.058 Sum_probs=24.7
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVP 55 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~ 55 (121)
...+|.|+.+.+.+..-. +.+.+|||++..
T Consensus 35 ~GiVV~ET~ntf~I~t~~-----~~~k~VPK~~~v 64 (97)
T 1oqk_A 35 SGRVVDETRNTLRIEMDD-----GREITVPKGIAV 64 (97)
T ss_dssp EEECCEEETTEEEEEETT-----TEEEEEECTTCE
T ss_pred EEEEEEcccceEEEEcCC-----CcEEEEECCCEE
Confidence 456899999999998755 578999999854
No 38
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=24.72 E-value=71 Score=17.13 Aligned_cols=19 Identities=11% Similarity=0.030 Sum_probs=14.8
Q ss_pred CCcCCCChhHHHHHHHHHH
Q psy9251 55 PNMNYLIAENKTLYGHLLL 73 (121)
Q Consensus 55 ~~~~~L~~~~~~~l~~l~~ 73 (121)
.+++.||++|.+++..+..
T Consensus 3 ~s~tGLT~~EA~EfH~~~~ 21 (45)
T 1lgh_B 3 RSLSGLTEEEAIAVHDQFK 21 (45)
T ss_dssp CCSSSCCHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHH
Confidence 4678899999888877654
No 39
>1ts9_A Ribonuclease P protein component 1; anti-parallel, beta-sheet, alpha helix, internal salt bridge, selenomethionine, SM-fold, hydrolase; 1.70A {Archaeoglobus fulgidus} SCOP: b.137.1.1 PDB: 1tsf_A 1pc0_A
Probab=24.55 E-value=91 Score=19.48 Aligned_cols=29 Identities=14% Similarity=0.039 Sum_probs=23.7
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCCCC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYNVP 55 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~Hv~ 55 (121)
...+|.|+.+.+.+.. . +.+.+|||.+..
T Consensus 34 ~GiVV~ETkntf~I~t-~-----~~~k~VPK~~~v 62 (102)
T 1ts9_A 34 KGEVVDETQNTLKIMT-E-----KGLKVVAKRGRT 62 (102)
T ss_dssp EEEEEEECSSEEEEEE-S-----SSEEEEECTTCE
T ss_pred EEEEEEeccceEEEEe-C-----CcEEEEECCCEE
Confidence 4569999999998887 4 567999999963
No 40
>2cs7_A Pneumococcal histidine triad A protein; PHTA, pneumococcal histidine triad protein, structural genomics, unknown function; 1.20A {Streptococcus pneumoniae} SCOP: d.9.2.1
Probab=23.95 E-value=1e+02 Score=17.20 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=22.9
Q ss_pred CccEEEEcCcEEEEEeCCCCCCCeEEEEEecCC
Q psy9251 21 NLTIIYEDTQCIAWEEMYHKVAPFHYKLVPKYN 53 (121)
Q Consensus 21 ~~~iv~e~d~~va~~d~~~P~~~gH~LViPk~H 53 (121)
|..||-+++.-+++.--. |+-.|||.-
T Consensus 14 p~dIvs~~~~gyvv~HGd------H~HyIpk~~ 40 (55)
T 2cs7_A 14 ASDIIEDTGDAYIVPHGD------HYHYIPKNE 40 (55)
T ss_dssp GGGCCEECSSEEEEEETT------EEEEEEGGG
T ss_pred HHHheecCCCeEEEecCC------eEEEeEhHH
Confidence 678999999999988877 888899865
Done!