BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9252
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62958|HINT1_BOVIN Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1
PE=1 SV=2
Length = 126
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + K+IY D C A+ +++ AP + +IPKK ++ ++ A+++D LL
Sbjct: 16 DTIFGKIIRKEIP-AKIIYEDDQCLAFHDISPQAPTHFLVIPKKYISQISAAEDDDESLL 74
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + +K A DL +++GYR+V+N G G ++ H ++ ++GGRQM +P
Sbjct: 75 GHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWP 124
>sp|P80912|HINT1_RABIT Histidine triad nucleotide-binding protein 1 OS=Oryctolagus
cuniculus GN=HINT1 PE=1 SV=2
Length = 126
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + K+I+ D C A+ +++ AP + +IPKK+++ ++ A++ D LL
Sbjct: 16 DTIFGKIIRKEIP-AKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLL 74
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + +K A DL +++GYR+V+N G G ++ H ++ ++GGRQM +P
Sbjct: 75 GHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWP 124
>sp|P49773|HINT1_HUMAN Histidine triad nucleotide-binding protein 1 OS=Homo sapiens
GN=HINT1 PE=1 SV=2
Length = 126
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + K+I+ D C A+ +++ AP + +IPKK+++ ++ A+++D LL
Sbjct: 16 DTIFGKIIRKEIP-AKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLL 74
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + +K A DL + +GYR+V+N G G ++ H ++ ++GGRQM +P
Sbjct: 75 GHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWP 124
>sp|P62959|HINT1_RAT Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus
GN=Hint1 PE=1 SV=5
Length = 126
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + K+I+ D C A+ +++ AP + +IPKK+++ ++ A ++D LL
Sbjct: 16 DTIFGKIIRKEIP-AKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVADDDDESLL 74
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + +K A DL ++ GYR+V+N G G ++ H ++ ++GGRQM +P
Sbjct: 75 GHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWP 124
>sp|P70349|HINT1_MOUSE Histidine triad nucleotide-binding protein 1 OS=Mus musculus
GN=Hint1 PE=1 SV=3
Length = 126
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + K+I+ D C A+ +++ AP + +IPKK+++ ++ A ++D LL
Sbjct: 16 DTIFGKIIRKEIP-AKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVADDDDESLL 74
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + +K A DL ++ GYR+V+N G G ++ H ++ ++GGRQM +P
Sbjct: 75 GHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWP 124
>sp|Q5RF69|HINT1_PONAB Histidine triad nucleotide-binding protein 1 OS=Pongo abelii
GN=HINT1 PE=2 SV=3
Length = 126
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + K+I+ D C A+ +++ AP + +IPKK+++ ++ A++++ LL
Sbjct: 16 DTIFGKIIRKEIP-AKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDNESLL 74
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + +K A DL + +GYR+V+N G G ++ H ++ ++GGRQM +P
Sbjct: 75 GHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWP 124
>sp|P32084|Y1390_SYNE7 Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1
Length = 114
Score = 88.2 bits (217), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + ++Y D LC A+R++ APV+I +IPK+ + +L EA E LL
Sbjct: 4 DTIFGKIIRREIP-ADIVYEDDLCLAFRDVAPQAPVHILVIPKQPIANLLEATAEHQALL 62
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ + A + EGYR VIN G AG + H +I L+GGR + +P
Sbjct: 63 GHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWP 112
>sp|P42856|ZB14_MAIZE 14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1
Length = 128
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 165 RLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPK--KNLTSLAEA 222
R L D ++DKI++ + V+Y D A+R++ AP +I IIPK LT LA+A
Sbjct: 10 RRLDDSPTIFDKIIKKEIP-STVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTGLAKA 68
Query: 223 QEEDAFLLGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
+E +LG++ ++ + A + +GYRVVIN+G +G ++ H ++ L+GGRQM +P
Sbjct: 69 EERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWP 126
>sp|Q9D0S9|HINT2_MOUSE Histidine triad nucleotide-binding protein 2, mitochondrial OS=Mus
musculus GN=Hint2 PE=2 SV=1
Length = 163
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 160 KTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSL 219
K PG ++ +IL ++Y D C +R++ APV+ +IP+K + +
Sbjct: 45 KAAPGGA---SPTIFSRILDRSLP-ADILYEDQQCLVFRDVAPQAPVHFLVIPRKPIPRI 100
Query: 220 AEAQEEDAFLLGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRY 279
++A+E+D LLGH+ + +K A +++GYR+V+N+G G ++ H +I ++GGRQ+++
Sbjct: 101 SQAEEDDQQLLGHLLLVAKKIAQAQGLKDGYRLVVNDGKMGAQSVYHLHIHVLGGRQLQW 160
Query: 280 P 280
P
Sbjct: 161 P 161
>sp|Q8SQ21|HINT2_BOVIN Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos
taurus GN=HINT2 PE=2 SV=1
Length = 163
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 173 LYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGH 232
++ +IL ++Y D C A+R++ APV+ +IPKK + +++A+EED LLGH
Sbjct: 55 IFSRILDRSLP-ADILYEDQQCLAFRDVAPQAPVHFLVIPKKPIPRISQAEEEDQQLLGH 113
Query: 233 MFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
+ + ++ A + +GYR+VIN+G G ++ H +I ++GGRQ+++P
Sbjct: 114 LLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWP 161
>sp|Q9BX68|HINT2_HUMAN Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo
sapiens GN=HINT2 PE=1 SV=1
Length = 163
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Query: 145 ISHGNEEEFMKRITLKTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLA 204
++ GNE ++ T PG ++ +IL +K ++Y D C +R++ A
Sbjct: 34 VTDGNEVAKAQQAT----PGGAA---PTIFSRIL-DKSLPADILYEDQQCLVFRDVAPQA 85
Query: 205 PVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNL 264
PV+ +IPKK + +++A+EED LLGH+ + ++ A + +GYR+VIN+G G ++
Sbjct: 86 PVHFLVIPKKPIPRISQAEEEDQQLLGHLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSV 145
Query: 265 THFNILLIGGRQMRYP 280
H +I ++GGRQ+++P
Sbjct: 146 YHLHIHVLGGRQLQWP 161
>sp|O66536|YHIT_AQUAE Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus (strain
VF5) GN=aq_141 PE=4 SV=1
Length = 121
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 173 LYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGH 232
++ KI+R + KKV Y D A+ ++ +APV+I IIPKK++ + + ED L+GH
Sbjct: 7 IFCKIVRGEVPAKKV-YEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPEDECLVGH 65
Query: 233 MFHLCQKFAFDL------KMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
MF++ +K A DL + +GYR+V N G ++ H ++ LIGGR+M +P
Sbjct: 66 MFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWP 119
>sp|P53795|HINT_CAEEL Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis
elegans GN=hint-1 PE=4 SV=1
Length = 130
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 170 HEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFL 229
++ L+ KI+R + K+I+ D A+ +++ AP++ +IPK+ + L A + DA L
Sbjct: 19 NDTLFGKIIRKEIP-AKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAAL 77
Query: 230 LGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
+G + K A L M GYRVV+NNG G ++ H ++ ++GGRQ+++P
Sbjct: 78 IGKLMVTASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWP 128
>sp|P73481|YHIT_SYNY3 Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr1234 PE=4 SV=1
Length = 114
Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI+R + ++Y D LC A++++ APV++ +IPKK L L+ A ED LL
Sbjct: 4 DTIFSKIIRREIP-AAIVYEDDLCLAFKDVNPQAPVHVLLIPKKPLPQLSAATPEDHALL 62
Query: 231 GHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
GH+ ++ A DL + + +R+VINNG + H ++ ++GGR +P
Sbjct: 63 GHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWP 112
>sp|P42855|ZB14_BRAJU 14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1
Length = 113
Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPK--KNLTSLAEAQEEDAF 228
+ ++ KI+ + V+Y D A+R++T PV+I +IPK LT L +A+E
Sbjct: 1 DTIFGKIISKEIP-STVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFKAEERHID 59
Query: 229 LLGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
+LG + + + A + EG+R+VIN+G G ++ H ++ LIGGRQM +P
Sbjct: 60 ILGRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWP 111
>sp|P44956|Y961_HAEIN HIT-like protein HI_0961 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0961 PE=1 SV=1
Length = 116
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
E ++ KI+R + ++Y D L A+R+++ A +I IIP K + ++ + E+D L
Sbjct: 4 ETIFSKIIRKEIP-ANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDEVAL 62
Query: 231 GHMFHLCQKFAFDLKMRE-GYRVVINNGHAGNHNLTHFNILLIGGRQM 277
G +F + K A + + E GYR+++N G + H ++ L+GG +
Sbjct: 63 GRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110
>sp|Q89AG5|YHIT_BUCBP Uncharacterized HIT-like protein bbp_327 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_327 PE=4
SV=1
Length = 112
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
+ ++ KI++ K+IY D A+ ++ +AP++I ++P + SL E E + +L
Sbjct: 3 QNIFQKIIKGIIP-SKIIYQDKEITAFHDINPIAPIHILVVPNLLIKSLNEINENNKHIL 61
Query: 231 GHMFHLCQKFAFDLKM-REGYRVVINNGHAGNHNLTHFNILLIGGRQM 277
G+M ++ K A K+ + GYR++IN G + H ++ L+GG+++
Sbjct: 62 GNMLYISIKIAKKFKIDKNGYRLIINCNQHGRQEIQHLHLHLLGGKKL 109
>sp|Q23921|PKIA_DICDI Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2
Length = 127
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAF-- 228
+ ++ KI+ KK Y+D C A ++ APV++ +IPK + L++ D
Sbjct: 14 DTIFAKIISGAIPSKK-FYDDEYCIAIEDINPQAPVHLLVIPKLAVGGLSDVANVDLEKY 72
Query: 229 --LLGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280
+GH+ A LK + YR+VIN G G ++ +I ++GGRQM +P
Sbjct: 73 KESMGHIMSKIHHIA-SLKGADSYRLVINEGVLGQQSVRWLHIHILGGRQMNWP 125
>sp|Q9Z863|YHIT_CHLPN HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 OS=Chlamydia
pneumoniae GN=CPn_0488 PE=4 SV=1
Length = 110
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 173 LYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGH 232
++ +I+ +KV N++ A ++ APV++ IIPKK + + ++ L+
Sbjct: 3 VFKQIIDGLIDCEKVFENENFI-AIKDRFPQAPVHLLIIPKKPIPRFQDIPGDEMILMAE 61
Query: 233 MFHLCQKFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGGRQM 277
+ Q+ A + + +GYRVVINNG G + H +I L+GGR +
Sbjct: 62 AGKIVQELAAEFGIADGYRVVINNGAEGGQAVFHLHIHLLGGRPL 106
>sp|P57438|YHIT_BUCAI Uncharacterized HIT-like protein BU357 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=BU357 PE=4
SV=1
Length = 114
Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 175 DKILRNKFKYK---KVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLG 231
+ I +N + K ++Y D A+ ++ APV+I IIP ++S + +++ +++
Sbjct: 4 NSIFKNIIQRKIPANIVYQDKKITAFEDIKPKAPVHILIIPNFFISSSNDINKKNKWIMS 63
Query: 232 HMFHLCQKFAFDLKM-REGYRVVINNGHAGNHNLTHFNILLIGGRQMR 278
HMF++ K A K+ +EGYR++IN G + + ++ L+GG++++
Sbjct: 64 HMFYIAVKIAKQKKINQEGYRIIINCNEYGGQEINYLHMHLLGGKKLK 111
>sp|Q9PK09|Y664_CHLMU Uncharacterized HIT-like protein TC_0664 OS=Chlamydia muridarum
(strain MoPn / Nigg) GN=TC_0664 PE=4 SV=1
Length = 126
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 154 MKRIT---LKTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINI 210
M+R T +KT G + ++++I+ + KV + D ++ APV++ I
Sbjct: 1 MRRSTEFGVKTAGGSM----TTIFERIIEGAVECDKV-FEDENFIVIKDKFPQAPVHLLI 55
Query: 211 IPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKMREGYRVVINNGHAGNHNL 264
IPKK++ L + Q +D LL + Q A D + GYRVVINNG G ++
Sbjct: 56 IPKKHIEKLQDMQSDDFSLLSEAGKIIQLMARDFGIENGYRVVINNGLEGGQSV 109
>sp|Q8K9I9|YHIT_BUCAP Uncharacterized HIT-like protein BUsg_345 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_345 PE=4
SV=1
Length = 115
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 187 VIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKM 246
+IY D + A+ ++ AP++I +IP + +L + +++ + HM ++ K A + K+
Sbjct: 20 IIYQDKIVTAFEDIAPKAPIHIIVIPNIFIKTLNDINQKNKNIFAHMLYIAVKIAKNKKI 79
Query: 247 RE-GYRVVINNGHAGNHNLTHFNILLIGGRQMR 278
E GY++V+N G + + ++ L+GG +++
Sbjct: 80 SEDGYKIVMNCNKNGGQEINYLHMHLLGGEKLK 112
>sp|P0ACE9|HINT_SHIFL HIT-like protein HinT OS=Shigella flexneri GN=hinT PE=4 SV=1
Length = 119
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
E ++ KI+R + ++Y D L A+R+++ AP +I IIP + ++ + E L
Sbjct: 4 ETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQAL 62
Query: 231 GHMFHLCQKFAFDLKMRE-GYRVVINNGHAGNHNLTHFNILLIGGRQM 277
G M + K A + E GYR+++N G + H ++ L+GGR +
Sbjct: 63 GRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
>sp|P0ACE7|HINT_ECOLI HIT-like protein HinT OS=Escherichia coli (strain K12) GN=hinT PE=1
SV=1
Length = 119
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
E ++ KI+R + ++Y D L A+R+++ AP +I IIP + ++ + E L
Sbjct: 4 ETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQAL 62
Query: 231 GHMFHLCQKFAFDLKMRE-GYRVVINNGHAGNHNLTHFNILLIGGRQM 277
G M + K A + E GYR+++N G + H ++ L+GGR +
Sbjct: 63 GRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
>sp|P0ACE8|HINT_ECO57 HIT-like protein HinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1
Length = 119
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 171 EKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLL 230
E ++ KI+R + ++Y D L A+R+++ AP +I IIP + ++ + E L
Sbjct: 4 ETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQAL 62
Query: 231 GHMFHLCQKFAFDLKMRE-GYRVVINNGHAGNHNLTHFNILLIGGRQM 277
G M + K A + E GYR+++N G + H ++ L+GGR +
Sbjct: 63 GRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
>sp|O07817|HITA_NEIGO Protein HitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1
Length = 107
Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 186 KVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLK 245
+ +Y D ++++ AP+++ +IPK + SLA A E LLG M + A
Sbjct: 17 QTVYEDGEMVCFKDINPAAPLHLLLIPKVHFDSLAHAAPEHQPLLGKMMLKVPEIAKASG 76
Query: 246 MREGYRVVINNGHAGNHNLTHFNILLIG 273
+ +G++ +IN G G + H +I ++G
Sbjct: 77 LTDGFKTLINTGKGGGQEVFHLHIHIMG 104
>sp|Q9ZDL1|YHIT_RICPR Uncharacterized HIT-like protein RP317 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP317 PE=4 SV=1
Length = 120
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 167 LYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKK------NLTSLA 220
+Y+ E ++ KI+ ++IY D A++++ +APV+I +IPK + S A
Sbjct: 1 MYNKENVFAKIITKNLP-AEIIYEDKQILAFKDIAPIAPVHIIVIPKNEYIDYTDFISKA 59
Query: 221 EAQEEDAFLLGHMFHLCQKFAFDLKM-REGYRVVINNGHAGNHNLTHFNILLIGGRQM 277
E + H F A + + + GYR++ N G + HF+ +IGG+++
Sbjct: 60 SIDE-----IKHFFSKIADIANEAGLDKVGYRLITNKGEKSGQTIFHFHFHIIGGKKL 112
>sp|O84390|YHIT_CHLTR Uncharacterized HIT-like protein CT_385 OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=CT_385 PE=4 SV=1
Length = 111
Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 173 LYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGH 232
++++I+ + KV +++ ++ APV++ IIPKK++ L + Q +D LL
Sbjct: 4 IFERIIEGAVECDKVFEDENFI-VIKDKFPQAPVHLLIIPKKHIEKLQDIQGDDFLLLAE 62
Query: 233 MFHLCQKFAFDLKMREGYRVVINNGHAGNHNL 264
+ Q A + + GYRVV+NNG G ++
Sbjct: 63 AGKIIQLMARNFGIENGYRVVVNNGLEGGQSV 94
>sp|P26724|YHIT_AZOBR Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region
OS=Azospirillum brasilense PE=4 SV=1
Length = 122
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 168 YDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAE--AQEE 225
YD ++ +ILR + KKV+ + A+ ++ AP +I +IPK + + A+
Sbjct: 5 YDPNNVFARILRGEIPCKKVLETEH-ALAFHDINPQAPTHILVIPKGAYVDMDDFSARAT 63
Query: 226 DAFLLGHMFHLCQKFAFDLKMRE-GYRVVINNGHAGNHNLTHFNILLIGGRQM 277
+A + G +F + A E GYR++ N G N + H +I + GR++
Sbjct: 64 EAEIAG-LFRAVGEVARGAGAAEPGYRILSNCGEDANQEVPHLHIHVFAGRRL 115
>sp|Q21IY4|LEUD_SACD2 3-isopropylmalate dehydratase small subunit OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=leuD
PE=3 SV=1
Length = 215
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 289 NSYASEVD----HCLSTYGDDFKLSGRMADFLGSYGSLKAKRAKWL 330
NSY+ EVD HCL DD L+ + AD + +Y + +AKRA WL
Sbjct: 165 NSYSFEVDEFRKHCLLKGLDDIGLTLQHADSITAYEAERAKRAPWL 210
>sp|Q494C5|ATPA_BLOPB ATP synthase subunit alpha OS=Blochmannia pennsylvanicus (strain
BPEN) GN=atpA PE=3 SV=1
Length = 513
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 26/144 (18%)
Query: 163 PGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPV------YINIIPKKNL 216
PG + Y H +L ++ R Y + + + LT + V + IP N+
Sbjct: 287 PGDIFYLHSRLLERASRVSSDYVERCTHGKITGRTGSLTAIPIVETQAGDVSSFIPT-NV 345
Query: 217 TSLAEAQEEDAFLLGHMFHLCQKFAFDLKMREGYRVVINNG----HAGNHNLTHFNILLI 272
S+ + Q FL H+F+ G R +N G G T+ +L
Sbjct: 346 ISITDGQ---IFLESHLFN------------SGIRPAVNPGISVSRVGGSAQTNIMKVLS 390
Query: 273 GGRQMRYPKYYDLSHFNSYASEVD 296
GG + +Y +L+ F+ +ASE+D
Sbjct: 391 GGIRTALAQYRELAAFSQFASELD 414
>sp|Q96M69|LRGUK_HUMAN Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Homo sapiens GN=LRGUK PE=2 SV=1
Length = 825
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 35 HETLAPHFYEDEREDIFKNEEKIFGERATPLDLLDGLQVLPYVLREKTVPPGHPGG---D 91
H T P+F E +R D + +F E G +L + H G D
Sbjct: 448 HTTRPPYFGEGDRVDYHFISQDVFDEMVN-----MGKFILTFSYG------NHKYGLNRD 496
Query: 92 TLEEVIRN----CKHLDFDNFRKLGEQKL-ARYVLKVHDRRRKYKNITQKTTVFDDSVIS 146
T+E + R+ C H++ + R L RY+L V + KY+ ++ +F + I
Sbjct: 497 TVEGIARDGLASCIHMEIEGVRSLKYSYFEPRYILVVPMNKEKYEGYLRRKGLFSRAEI- 555
Query: 147 HGNEEEFMKRITLKTVPGRLLYDHEKLYDKILRNKFKY-KKVIYNDSLCWAYRELTKLAP 205
E + R+ LY KI +N Y +VI D L AY++L++L
Sbjct: 556 ----EFAVSRV--------------DLYIKINQNFPGYFDEVINADDLDVAYQKLSQLIR 597
Query: 206 VYINII--PKKNLTSLAEAQ 223
Y+ + P K+L + A+ +
Sbjct: 598 EYLGLTEEPAKSLATTADVK 617
>sp|P36924|AMYB_BACCE Beta-amylase OS=Bacillus cereus GN=spoII PE=1 SV=2
Length = 546
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 142 DSVISHGNEEEFMKRITLKTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELT 201
++ +S GNEEE+ KR+ + +++ +LR Y+ V+YN+SL +++L
Sbjct: 397 ENALSIGNEEEY-KRV------AEMAFNYNFAGFTLLR----YQDVMYNNSLMGKFKDLL 445
Query: 202 KLAPVYINIIPKKNLTSLAEA 222
+ PV I+ K T++ +
Sbjct: 446 GVTPVMQTIVVKNVPTTIGDT 466
>sp|Q6B8R6|RPOC2_GRATL DNA-directed RNA polymerase subunit beta'' OS=Gracilaria
tenuistipitata var. liui GN=rpoC2 PE=3 SV=1
Length = 1228
Score = 32.0 bits (71), Expect = 8.0, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 23/116 (19%)
Query: 150 EEEFMKRITLKTVPGRLLYDHEKLYD------------KILRNKFKYKKVIYNDSLCWAY 197
+E ++ I +K PG +LY H K YD +I+ N K K++Y +
Sbjct: 679 KEGIVREIIIK--PG-ILYPHSKFYDHKSKSRGFLKPGEIISNDLKTDKLVYWEYFYVKN 735
Query: 198 RELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQ-KFAFDLKMREGYRV 252
+ T + PV + IP K + A ++ H+C K + R+G RV
Sbjct: 736 QSYTLIRPVIVYSIPSKTIQFKYSADSFNS-------HICSLKLVKRIYFRDGERV 784
>sp|Q522W5|SNX4_MAGO7 Sorting nexin-4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617
/ FGSC 8958) GN=SNX4 PE=3 SV=1
Length = 495
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 97 IRNCKHLDFDNFRKLGEQKLARYVLKVHDRRRKYKNITQKTTVFDDSVISHGNEEEFMKR 156
I + + +D + R+ ++L + L++ + + + + + +FD+ VI ++ E +KR
Sbjct: 399 IEDVRGVDHEQSRR---ERLRKLELRIEELTVEVERAKKTSELFDEEVIREVSDFERIKR 455
Query: 157 ITLKTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWA 196
I LK G L H YD + KY K + + A
Sbjct: 456 IELKRQFGSLAQSHTDFYDATIDVWEKYVKEMEKEGAVAA 495
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,100,485
Number of Sequences: 539616
Number of extensions: 6147111
Number of successful extensions: 15782
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 15728
Number of HSP's gapped (non-prelim): 69
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)