Query psy9252
Match_columns 346
No_of_seqs 234 out of 1324
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 22:43:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9252.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9252hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z84_A Galactose-1-phosphate u 100.0 5.7E-37 1.9E-41 298.6 14.5 167 84-274 130-318 (351)
2 1gup_A Galactose-1-phosphate u 100.0 1.4E-36 4.7E-41 294.9 13.1 169 84-273 112-301 (348)
3 3o1c_A Histidine triad nucleot 100.0 1.5E-34 5.1E-39 243.0 11.4 113 169-282 14-126 (126)
4 3n1s_A HIT-like protein HINT; 100.0 8.8E-34 3E-38 236.5 11.7 112 169-281 2-114 (119)
5 3oj7_A Putative histidine tria 100.0 1.7E-33 5.8E-38 232.8 11.8 108 172-281 9-116 (117)
6 4egu_A Histidine triad (HIT) p 100.0 1.5E-32 5E-37 227.5 10.9 110 170-280 4-114 (119)
7 1xqu_A HIT family hydrolase; p 100.0 2.4E-31 8.1E-36 230.9 11.6 112 169-281 34-146 (147)
8 3o0m_A HIT family protein; ssg 100.0 1.3E-29 4.4E-34 218.5 13.6 105 169-274 4-109 (149)
9 3imi_A HIT family protein; str 100.0 1.5E-29 5.1E-34 217.6 12.2 104 169-274 8-112 (147)
10 3lb5_A HIT-like protein involv 100.0 2.5E-29 8.5E-34 220.7 13.2 105 168-274 26-131 (161)
11 3ksv_A Uncharacterized protein 100.0 2.8E-29 9.4E-34 217.7 12.1 101 170-274 11-114 (149)
12 3l7x_A SMU.412C, putative HIT- 100.0 3.2E-29 1.1E-33 222.9 11.2 111 160-274 28-139 (173)
13 3ano_A AP-4-A phosphorylase; d 99.9 4.1E-28 1.4E-32 223.5 11.8 118 169-293 68-187 (218)
14 2eo4_A 150AA long hypothetical 99.9 1.2E-27 4.3E-32 205.2 13.1 101 172-274 1-102 (149)
15 3r6f_A HIT family protein; str 99.9 3.7E-28 1.3E-32 206.2 9.1 97 169-274 5-101 (135)
16 1y23_A HIT, histidine triad pr 99.9 4.9E-28 1.7E-32 205.9 9.3 103 170-274 5-108 (145)
17 3p0t_A Uncharacterized protein 99.9 6.2E-27 2.1E-31 198.5 11.1 98 170-274 5-103 (138)
18 2oik_A Histidine triad (HIT) p 99.9 6.2E-24 2.1E-28 183.4 11.8 97 168-275 8-105 (154)
19 1fit_A FragIle histidine prote 99.9 1.9E-23 6.5E-28 178.8 11.9 103 173-279 4-107 (147)
20 1ems_A Nitfhit, NIT-fragIle hi 99.9 6.4E-23 2.2E-27 201.6 12.0 106 169-278 296-402 (440)
21 3ohe_A Histidine triad (HIT) p 99.7 8.1E-18 2.8E-22 144.1 12.5 84 185-274 13-97 (137)
22 3i24_A HIT family hydrolase; s 99.7 4.8E-18 1.6E-22 147.9 10.8 84 185-274 13-97 (149)
23 3sp4_A Aprataxin-like protein; 99.7 3E-18 1E-22 157.0 7.5 139 187-342 23-176 (204)
24 3nrd_A Histidine triad (HIT) p 99.7 5.2E-16 1.8E-20 132.4 11.5 83 185-274 15-99 (135)
25 3i4s_A Histidine triad protein 99.6 2.4E-14 8.3E-19 124.7 12.5 83 185-274 18-102 (149)
26 3bl9_A Scavenger mRNA-decappin 98.9 2.6E-09 8.8E-14 102.9 10.4 98 174-275 140-248 (301)
27 1vlr_A MRNA decapping enzyme; 98.9 3.8E-09 1.3E-13 103.3 9.8 98 174-275 187-295 (350)
28 1z84_A Galactose-1-phosphate u 98.6 1.5E-07 5.1E-12 91.6 11.1 101 170-273 61-191 (351)
29 1gup_A Galactose-1-phosphate u 96.2 0.019 6.7E-07 55.4 9.6 63 207-273 107-171 (348)
30 2pof_A CDP-diacylglycerol pyro 93.4 0.093 3.2E-06 48.8 5.5 85 185-273 31-121 (227)
31 3vg8_G Hypothetical protein TT 49.5 21 0.00073 29.7 4.7 25 247-272 76-100 (116)
32 2yzt_A Putative uncharacterize 24.6 19 0.00065 26.4 0.5 22 82-104 23-44 (67)
No 1
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=100.00 E-value=5.7e-37 Score=298.58 Aligned_cols=167 Identities=17% Similarity=0.142 Sum_probs=149.0
Q ss_pred CCCCCC---CCcHHHHHHHHhhhhhHhHHHhccCcCccEeec--------------CCCccccCCCCCchhHHHhhhhcc
Q psy9252 84 PPGHPG---GDTLEEVIRNCKHLDFDNFRKLGEQKLARYVLK--------------VHDRRRKYKNITQKTTVFDDSVIS 146 (346)
Q Consensus 84 ~~~~~~---~~~~~~~~~~~~~l~~dr~~~L~~~~~i~yV~~--------------pHGqiyaYp~Ip~k~~~~l~~~~s 146 (346)
+|-|.+ --| .|-|+.++++|.+|+++|+++++++||++ |||||||||+||+.++.+++++..
T Consensus 130 sp~H~~~l~~ls-~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~ 208 (351)
T 1z84_A 130 SPVHSIQLSDID-PVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKD 208 (351)
T ss_dssp CSSSSCCGGGSC-HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHH
T ss_pred CCCCCCCcHHCC-HHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHH
Confidence 566664 233 35589999999999999999999999999 999999999999999999999888
Q ss_pred cCchHHHHHHhhhccCCCCccCCCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHH
Q psy9252 147 HGNEEEFMKRITLKTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEED 226 (346)
Q Consensus 147 h~~~e~~~~~~~~~~~~~~~~~~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE 226 (346)
|+++ .+.|+||+|+++|. +||||++|+||+|++|.+|||+|||||+|+.++.+|++++
T Consensus 209 y~~~------------------~~~ciFc~ii~~E~----iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e 266 (351)
T 1z84_A 209 YFEE------------------TGKCCLCEAKSKHF----VIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVK 266 (351)
T ss_dssp HHHH------------------HSSCTTTTHHHHSE----EEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHH
T ss_pred HHhh------------------cCCCHHHHHHhcCe----EEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHH
Confidence 7774 36899999998874 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HHHHHHHHhCCCCCeEEEEecCCCCC----CccceeeEEEecC
Q psy9252 227 AFLLGHMFH-LCQKFAFDLKMREGYRVVINNGHAGN----HNLTHFNILLIGG 274 (346)
Q Consensus 227 ~~~La~Ll~-va~kVlk~lgL~~GYnm~~N~Gp~AG----qsV~HLHLHIIPr 274 (346)
+..|+.+++ +++++.+.++. +|||+++|+|+.+| |+++|+|+||+||
T Consensus 267 ~~~La~~l~~v~~~l~~~~~~-~~yn~~~n~gp~~g~~~~q~v~HlHiHiiPR 318 (351)
T 1z84_A 267 AVDLGGLLKLMLQKIAKQLND-PPYNYMIHTSPLKVTESQLPYTHWFLQIVPQ 318 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS-CCEEEEEECCCTTCCGGGGGGCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCEEEEEeCCCccCCCCCCccceEEEEEEcc
Confidence 999999988 44566666774 59999999999987 7999999999997
No 2
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=100.00 E-value=1.4e-36 Score=294.94 Aligned_cols=169 Identities=9% Similarity=0.056 Sum_probs=146.6
Q ss_pred CCCCCC---CCcHHHHHHHHhhhhhHhHHHhccCcCccEeec--------------CCCccccCCCCCchhHHHhhhhcc
Q psy9252 84 PPGHPG---GDTLEEVIRNCKHLDFDNFRKLGEQKLARYVLK--------------VHDRRRKYKNITQKTTVFDDSVIS 146 (346)
Q Consensus 84 ~~~~~~---~~~~~~~~~~~~~l~~dr~~~L~~~~~i~yV~~--------------pHGqiyaYp~Ip~k~~~~l~~~~s 146 (346)
.|-|.+ --|. +-|+++++.|.||+++|+ +.++||++ |||||||+|++|+.++.+++++..
T Consensus 112 sp~H~~~l~~l~~-~~~~~vi~~~~~r~~~l~--~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~~~p~~~~~e~~~~~~ 188 (348)
T 1gup_A 112 SPDHSKTLPELSV-AALTEIVKTWQEQTAELG--KTYPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKE 188 (348)
T ss_dssp CSCTTCCGGGSCH-HHHHHHHHHHHHHHHHHH--HHCSEEEEEEEESGGGTCSCCSSEEEEEEESSCCHHHHHHHHHHHH
T ss_pred CCcccCChhhCCH-HHHHHHHHHHHHHHHHHh--hcCCEEEEecccCCcCCcCCCCCceeEEecccCChHHHHHHHHHHH
Confidence 345554 2343 458999999999999999 89999998 999999999999999999999877
Q ss_pred cCchHHHHHHhhhccCCCCccCCCCCccccccccccCC-ccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHH
Q psy9252 147 HGNEEEFMKRITLKTVPGRLLYDHEKLYDKILRNKFKY-KKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEE 225 (346)
Q Consensus 147 h~~~e~~~~~~~~~~~~~~~~~~~~CVFCdIi~~E~~~-~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~e 225 (346)
|+++ .+.|+||+|+++|.+. .+|||||++|+||+|++|.+|||+|||||+|+.++.+|+++
T Consensus 189 y~~~------------------~~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~ 250 (348)
T 1gup_A 189 YFAE------------------QKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDA 250 (348)
T ss_dssp HHHH------------------HSSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHH
T ss_pred HHhc------------------CCCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHH
Confidence 7764 2689999999998762 39999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHhCCCCCeEEEEecCCCCC--CccceeeEEEec
Q psy9252 226 DAFLLGHMFH-LCQKFAFDLKMREGYRVVINNGHAGN--HNLTHFNILLIG 273 (346)
Q Consensus 226 E~~~La~Ll~-va~kVlk~lgL~~GYnm~~N~Gp~AG--qsV~HLHLHIIP 273 (346)
++..|+.+++ +++++.+.++.+.|||+++|.++.+| |+++|+|+||||
T Consensus 251 e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 251 QRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 9999999887 45555556673349999999999854 899999999999
No 3
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=100.00 E-value=1.5e-34 Score=242.97 Aligned_cols=113 Identities=33% Similarity=0.699 Sum_probs=108.2
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKMRE 248 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL~~ 248 (346)
+++|+||+|+++|.+ +++||||++++||+|++|.+|||+|||||+|++++.+|+++|..++++++.+++++++.++.++
T Consensus 14 ~~~CiFC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~~ 92 (126)
T 3o1c_A 14 GGDTIFGKIIRKEIP-AKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKK 92 (126)
T ss_dssp TCSSHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCCCcchhhcCCCc-CCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 578999999999998 8999999999999999999999999999999999999999999999999999999999887667
Q ss_pred CeEEEEecCCCCCCccceeeEEEecCCCCCCCCC
Q psy9252 249 GYRVVINNGHAGNHNLTHFNILLIGGRQMRYPKY 282 (346)
Q Consensus 249 GYnm~~N~Gp~AGqsV~HLHLHIIPrdkLkw~aG 282 (346)
|||+++|+|+.|||+|+|+|+|||||.+|+|++|
T Consensus 93 g~ni~~n~g~~agq~v~HlH~Hiipr~~~~~~~~ 126 (126)
T 3o1c_A 93 GYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126 (126)
T ss_dssp CEEEECCCHHHHTCCSSSCCEEEEESSCCCSSCC
T ss_pred CeEEEEecCCccCCccCEeEEEEeCCcccCCCCC
Confidence 9999999999999999999999999999999976
No 4
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=100.00 E-value=8.8e-34 Score=236.47 Aligned_cols=112 Identities=28% Similarity=0.557 Sum_probs=105.8
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKM-R 247 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL-~ 247 (346)
+++|+||+|+++|.+ +++|||||+++||+|++|.+|||+|||||+|++++.+|+++|+.++++++.++++++++.++ +
T Consensus 2 ~~~CiFC~I~~ge~~-~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~ 80 (119)
T 3n1s_A 2 AEETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAE 80 (119)
T ss_dssp CCCCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCChhhhhhcCCCc-CCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 457999999999988 89999999999999999999999999999999999999999999999999999999987666 6
Q ss_pred CCeEEEEecCCCCCCccceeeEEEecCCCCCCCC
Q psy9252 248 EGYRVVINNGHAGNHNLTHFNILLIGGRQMRYPK 281 (346)
Q Consensus 248 ~GYnm~~N~Gp~AGqsV~HLHLHIIPrdkLkw~a 281 (346)
+|||+++|+|+.+||+|+|+|+|||||++++|..
T Consensus 81 ~g~ni~~n~g~~agq~V~HlH~Hiipr~~~~~~~ 114 (119)
T 3n1s_A 81 DGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPML 114 (119)
T ss_dssp TCEEEEEEEHHHHTCCSSSCCEEEEESSCCCCSS
T ss_pred CCeEEEEeCCCCcCCCcCEEEEEEeCCcccCccc
Confidence 8999999999999999999999999999998863
No 5
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=100.00 E-value=1.7e-33 Score=232.84 Aligned_cols=108 Identities=27% Similarity=0.580 Sum_probs=102.3
Q ss_pred CccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q psy9252 172 KLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKMREGYR 251 (346)
Q Consensus 172 CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL~~GYn 251 (346)
|+||+|+++|.+ .++|||||+++||+|++|++|||+|||||+|++++.+|+++|+.++++++.+++++++. ++++|||
T Consensus 9 CiFC~i~~~e~~-~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~-~~~~g~n 86 (117)
T 3oj7_A 9 CIFCKIAQKQIP-STIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKK-ECPEGYR 86 (117)
T ss_dssp CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHH-HCTTCEE
T ss_pred CcccccccCCCC-CCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHh-cCCCCeE
Confidence 999999999988 89999999999999999999999999999999999999999999999999999998886 4445999
Q ss_pred EEEecCCCCCCccceeeEEEecCCCCCCCC
Q psy9252 252 VVINNGHAGNHNLTHFNILLIGGRQMRYPK 281 (346)
Q Consensus 252 m~~N~Gp~AGqsV~HLHLHIIPrdkLkw~a 281 (346)
+++|+|+.+||+|+|+|+|||||.+|+|++
T Consensus 87 i~~n~g~~agq~v~H~H~Hiipr~~~~~~~ 116 (117)
T 3oj7_A 87 VVNNIGEDAGQTVKHIHFHILGGKKLAWDK 116 (117)
T ss_dssp EECCCSTTTTCCSSSCCEEEEESSCCCCCC
T ss_pred EEEcCCCCCCeeeeEEEEEEeCCCCCCCCC
Confidence 999999999999999999999999999984
No 6
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.98 E-value=1.5e-32 Score=227.49 Aligned_cols=110 Identities=23% Similarity=0.476 Sum_probs=103.0
Q ss_pred CCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCC-CC
Q psy9252 170 HEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKM-RE 248 (346)
Q Consensus 170 ~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL-~~ 248 (346)
++|+||+|+++|.+ +++||||++++||+|++|++|||+|||||+|++++.+|+++|+.++++++.+++++++.+++ ++
T Consensus 4 ~~C~FC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~ 82 (119)
T 4egu_A 4 MDCIFCKIANGEIP-STKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQT 82 (119)
T ss_dssp TTCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCccCeecccCCCC-CCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 57999999999988 89999999999999999999999999999999999999999999999999999999988765 56
Q ss_pred CeEEEEecCCCCCCccceeeEEEecCCCCCCC
Q psy9252 249 GYRVVINNGHAGNHNLTHFNILLIGGRQMRYP 280 (346)
Q Consensus 249 GYnm~~N~Gp~AGqsV~HLHLHIIPrdkLkw~ 280 (346)
|||+++|+|+.+||+|+|+|+|||||+++++.
T Consensus 83 ~~ni~~n~g~~agq~v~HlH~Hiip~~~~~~~ 114 (119)
T 4egu_A 83 GFRVINNCGSDGGQEVKHLHYHILAGKKLPNY 114 (119)
T ss_dssp CEEEEEEETTTTTCCSCSCCEEEEESSCCCCG
T ss_pred CEEEEEeCCCCCCCCcCEEEEEEeCCcccCcc
Confidence 99999999999999999999999999877643
No 7
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.97 E-value=2.4e-31 Score=230.86 Aligned_cols=112 Identities=28% Similarity=0.474 Sum_probs=106.2
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKM-R 247 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL-~ 247 (346)
+++|+||+|+++|.+ .+|||||++|+||+|++|++|||+|||||+|++++.+|+++|+.++++++++++++++.++. +
T Consensus 34 m~~CiFC~ii~~e~~-~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~ 112 (147)
T 1xqu_A 34 LENCVFCKIIKRELP-STIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAE 112 (147)
T ss_dssp CTTCHHHHHHTTSSC-BCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTT
T ss_pred cCCCcccccccCCCC-cEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 468999999999988 89999999999999999999999999999999999999999999999999999999998876 5
Q ss_pred CCeEEEEecCCCCCCccceeeEEEecCCCCCCCC
Q psy9252 248 EGYRVVINNGHAGNHNLTHFNILLIGGRQMRYPK 281 (346)
Q Consensus 248 ~GYnm~~N~Gp~AGqsV~HLHLHIIPrdkLkw~a 281 (346)
+|||+++|+|+.+||+++|+|+||||++++.|+.
T Consensus 113 ~gyni~~n~g~~aGq~v~HlHlHiiP~~~~~wp~ 146 (147)
T 1xqu_A 113 KGYRLITNCGVAAGQTVFHLHYHLLGGVDMGPKI 146 (147)
T ss_dssp TCEEEECCCSTTTTCCSCSCCEEEEESSCCCSCC
T ss_pred CCEEEEEecCcccCCCccEEEEEEeCCCcCCCCC
Confidence 7999999999999999999999999999999973
No 8
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.96 E-value=1.3e-29 Score=218.47 Aligned_cols=105 Identities=15% Similarity=0.220 Sum_probs=93.8
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKM-R 247 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL-~ 247 (346)
+++|+||+|+++|.+ +++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..|..+++.+.+.++..++ +
T Consensus 4 m~~CiFC~i~~~e~~-~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~ 82 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAP-AIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHA 82 (149)
T ss_dssp TTTCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCCCccCccccCCCC-CCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 468999999999998 89999999999999999999999999999999999999999887777777654444444433 6
Q ss_pred CCeEEEEecCCCCCCccceeeEEEecC
Q psy9252 248 EGYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 248 ~GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
+|||+++|+|+.+||+|+|+|+|||||
T Consensus 83 ~~~ni~~n~g~~aGq~v~HlHiHiiPR 109 (149)
T 3o0m_A 83 DGNNIAINDGKAAFQTVFHIHLHVVPR 109 (149)
T ss_dssp SEEEEECCCSGGGTCCSSSCCEEEEEE
T ss_pred CceEEEEecCCCCCCccceEEEEEECC
Confidence 799999999999999999999999997
No 9
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.96 E-value=1.5e-29 Score=217.64 Aligned_cols=104 Identities=17% Similarity=0.282 Sum_probs=92.8
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHH-HHHHHHhCCC
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLC-QKFAFDLKMR 247 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va-~kVlk~lgL~ 247 (346)
+++|+||+|+++|.+ +++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..|..+++.+ +.+.+.++ +
T Consensus 8 m~~CifC~i~~~e~~-~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~-~ 85 (147)
T 3imi_A 8 ADNCIFCKIIDGQIL-CSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFN-P 85 (147)
T ss_dssp GGGCHHHHHHTTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHC-C
T ss_pred cCCCcCcccccCCCc-CCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 568999999999998 89999999999999999999999999999999999999999877777766633 33333456 6
Q ss_pred CCeEEEEecCCCCCCccceeeEEEecC
Q psy9252 248 EGYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 248 ~GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
+|||+++|+|+.+||+|+|+|+|||||
T Consensus 86 ~~~ni~~n~g~~aGq~v~HlHiHiiPR 112 (147)
T 3imi_A 86 VGFNLLNNNGEKAGQTVFHFHLHLIPR 112 (147)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEEEEEE
T ss_pred CCEEEEEeCCcccCCCcCEEEEEEeCC
Confidence 899999999999999999999999998
No 10
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.96 E-value=2.5e-29 Score=220.68 Aligned_cols=105 Identities=24% Similarity=0.377 Sum_probs=92.9
Q ss_pred CCCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHH-HHhCC
Q psy9252 168 YDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFA-FDLKM 246 (346)
Q Consensus 168 ~~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVl-k~lgL 246 (346)
++++|+||+|+++|.+ +++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..|..+++.+.+.+ +.++
T Consensus 26 ~~~~CiFC~i~~~e~p-~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~- 103 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIP-SVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQ- 103 (161)
T ss_dssp CCTTSHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCCCCcccccccCCCC-ccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 4678999999999988 899999999999999999999999999999999999999998777777666333322 3445
Q ss_pred CCCeEEEEecCCCCCCccceeeEEEecC
Q psy9252 247 REGYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 247 ~~GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
++|||+++|+|+.+||+|+|+|+|||||
T Consensus 104 ~~g~ni~~n~g~~aGq~V~HlHiHiiPR 131 (161)
T 3lb5_A 104 ADGITVMQFNEAASQQTVYHLHFHIIPR 131 (161)
T ss_dssp CSEEEEEEEESGGGTCCSCSCCEEEEEE
T ss_pred CCCEEEEEecCcccCCCCCEEEEEEEcc
Confidence 6799999999999999999999999998
No 11
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.96 E-value=2.8e-29 Score=217.67 Aligned_cols=101 Identities=23% Similarity=0.307 Sum_probs=89.6
Q ss_pred CCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhC--C-
Q psy9252 170 HEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLK--M- 246 (346)
Q Consensus 170 ~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lg--L- 246 (346)
.+|+||+|++||.| +++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..+.. +++++++.++ +
T Consensus 11 ~~~iFc~Ii~geip-~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~---~~~~v~~~l~~~~~ 86 (149)
T 3ksv_A 11 ANCIFCKIIKGDIP-CAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGV---LLAKASRAVAGPDG 86 (149)
T ss_dssp TTCHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHH---HHHHHHHHHHCTTS
T ss_pred ccCHHHHHHcCCCC-ccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHH---HHHHHHHHHHHhhC
Confidence 57999999999999 899999999999999999999999999999999999999987555544 4445555442 2
Q ss_pred CCCeEEEEecCCCCCCccceeeEEEecC
Q psy9252 247 REGYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 247 ~~GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
++|||+++|+|+.+||+|+|+|+|||||
T Consensus 87 ~~g~ni~~n~g~~aGq~v~HlHiHiiPR 114 (149)
T 3ksv_A 87 SMQYNVLQNNGSLAHQEVPHVHFHIIPK 114 (149)
T ss_dssp CCEEEEEECCSTTTTCCSSSCCEEEEEE
T ss_pred CCCEEEEEecCcccCCCCCEEEEEEEec
Confidence 5799999999999999999999999997
No 12
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.96 E-value=3.2e-29 Score=222.89 Aligned_cols=111 Identities=16% Similarity=0.233 Sum_probs=95.3
Q ss_pred ccCCCCccCCCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHH-HH
Q psy9252 160 KTVPGRLLYDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHL-CQ 238 (346)
Q Consensus 160 ~~~~~~~~~~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~v-a~ 238 (346)
+.|+++ .+++|+||+|+++|.+ +++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..|..+++. ++
T Consensus 28 ~~~~~~--~m~~CiFC~Ii~~e~p-~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~ 104 (173)
T 3l7x_A 28 QQMGRG--SMNDCLFCKIVAGDIP-SSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIAR 104 (173)
T ss_dssp BCCC-C--CCTTCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHH
T ss_pred ccccCC--CCCCCcccccccCCCC-ceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHH
Confidence 344444 2578999999999998 8999999999999999999999999999999999999999987777776663 33
Q ss_pred HHHHHhCCCCCeEEEEecCCCCCCccceeeEEEecC
Q psy9252 239 KFAFDLKMREGYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 239 kVlk~lgL~~GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
.+.+.++ ++|||+++|+|+.+||+|+|+|+|||||
T Consensus 105 ~l~~~~~-~~g~ni~~n~g~~aGq~V~HlHiHiIPR 139 (173)
T 3l7x_A 105 ALQKATK-ADGLNIINNNEETAGQTVFHAHVHLVPR 139 (173)
T ss_dssp HHHHHHT-CSEEEEEECCSGGGTCCSCSCCEEEEEE
T ss_pred HHHHhcC-CCCEEEEEecCcccCCCcCEEEEEEEec
Confidence 3333456 6799999999999999999999999997
No 13
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.1e-28 Score=223.54 Aligned_cols=118 Identities=14% Similarity=0.224 Sum_probs=101.0
Q ss_pred CCCCccccccccc-cCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9252 169 DHEKLYDKILRNK-FKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKMR 247 (346)
Q Consensus 169 ~~~CVFCdIi~~E-~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL~ 247 (346)
++.|+||+|++++ .+ .+|||||++|+||+|++|++|||+|||||+|++++.+|+++++.+|+.+++.+.++++...-+
T Consensus 68 ~~~CiFC~i~~~e~~~-~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~ 146 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEE-GLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRP 146 (218)
T ss_dssp --CCHHHHGGGSCHHH-HTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCcCcccccCCCCC-ceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3579999999884 45 799999999999999999999999999999999999999999999999999777777655336
Q ss_pred CCeEEEEecCCCCCCcc-ceeeEEEecCCCCCCCCCCCcchhhhhhh
Q psy9252 248 EGYRVVINNGHAGNHNL-THFNILLIGGRQMRYPKYYDLSHFNSYAS 293 (346)
Q Consensus 248 ~GYnm~~N~Gp~AGqsV-~HLHLHIIPrdkLkw~aGsdtnf~~s~a~ 293 (346)
+|||+++|+|+.+|++| +|+|+||||| |. | |.+|+..++.
T Consensus 147 ~g~ni~~n~G~~aGq~V~~HlHiHIIPR----~~-g-d~~f~~v~g~ 187 (218)
T 3ano_A 147 HGFNVGLNLGTSAGGSLAEHLHVHVVPR----WG-G-DANFITIIGG 187 (218)
T ss_dssp SEEEEEEEESGGGTCTTTTSCCEEEEEE----CT-T-GGGCCCCC--
T ss_pred CCEEEEEecCcccCCcccCEEEEEEEcc----cC-C-CCCccccccc
Confidence 79999999999999999 9999999998 54 3 5666655543
No 14
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.95 E-value=1.2e-27 Score=205.20 Aligned_cols=101 Identities=20% Similarity=0.273 Sum_probs=89.8
Q ss_pred CccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHH-HhCCCCCe
Q psy9252 172 KLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAF-DLKMREGY 250 (346)
Q Consensus 172 CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk-~lgL~~GY 250 (346)
|+||+|+++|.+ +++||||++++||+|++|.+|||+|||||+|++++.+|+++++..|..+++.+.+.++ .++ ++||
T Consensus 1 CiFC~i~~~e~~-~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~~~ 78 (149)
T 2eo4_A 1 CTFCSIINRELE-GYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVK-ADGL 78 (149)
T ss_dssp CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEE
T ss_pred CcCcccccCCCC-ccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcC-CCCe
Confidence 999999999988 8999999999999999999999999999999999999999987777776663333333 345 5799
Q ss_pred EEEEecCCCCCCccceeeEEEecC
Q psy9252 251 RVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 251 nm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
|+++|+|+.+||+++|+|+|||||
T Consensus 79 ni~~n~g~~~gq~v~HlHiHviPr 102 (149)
T 2eo4_A 79 RLLTNIGRSAGQVIFHLHVHIIPT 102 (149)
T ss_dssp EEECCCSGGGTCCSCSCCEEEEEE
T ss_pred EEEEecCcCCCCCcCEEEEEEECC
Confidence 999999999999999999999996
No 15
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.95 E-value=3.7e-28 Score=206.23 Aligned_cols=97 Identities=18% Similarity=0.256 Sum_probs=86.5
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAFDLKMRE 248 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk~lgL~~ 248 (346)
+++|+||+|++ .+ +++||||++++||+|++|.+|||+|||||+|++++.+|+++++ ++++.+++++++.++ ++
T Consensus 5 ~~~C~fC~i~~--~~-~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~---~~l~~~~~~v~~~~~-~~ 77 (135)
T 3r6f_A 5 MEGCIFCTLYR--KG-ANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEEL---SGVLDTIRHLVQKFG-FE 77 (135)
T ss_dssp -CCCHHHHHHH--HC-CSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGG---TTHHHHHHHHHHHHT-CC
T ss_pred CCCCcCccccc--CC-ceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHH---HHHHHHHHHHHHHhC-CC
Confidence 56899999988 55 7999999999999999999999999999999999999999875 445555567777777 57
Q ss_pred CeEEEEecCCCCCCccceeeEEEecC
Q psy9252 249 GYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 249 GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
|||+++|+|+ ||+|+|+|+|||||
T Consensus 78 ~~ni~~n~g~--gq~v~HlH~HiiPR 101 (135)
T 3r6f_A 78 RYNILQNNGN--HQEVFHVHFHVIPF 101 (135)
T ss_dssp SEEEECCSSS--SCSSSSCCEEEEEC
T ss_pred CeEEEEEcCC--CCCccEEEEEEecc
Confidence 9999999999 99999999999997
No 16
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.95 E-value=4.9e-28 Score=205.93 Aligned_cols=103 Identities=17% Similarity=0.289 Sum_probs=91.3
Q ss_pred CCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHH-HHhCCCC
Q psy9252 170 HEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFA-FDLKMRE 248 (346)
Q Consensus 170 ~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVl-k~lgL~~ 248 (346)
++|+||+|+++|.+ .++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..|..+++.+.+.+ +.++ ++
T Consensus 5 ~~C~fC~i~~~e~~-~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~-~~ 82 (145)
T 1y23_A 5 ENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFE-PI 82 (145)
T ss_dssp CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHC-CS
T ss_pred CCCcCCccccCCCC-CCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 57999999999988 799999999999999999999999999999999999999998777777666333333 3445 57
Q ss_pred CeEEEEecCCCCCCccceeeEEEecC
Q psy9252 249 GYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 249 GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
|||+++|+|+.+||+++|+|+|||||
T Consensus 83 ~~ni~~n~g~~~g~~v~HlH~HiiPr 108 (145)
T 1y23_A 83 GLNTLNNNGEKAGQSVFHYHMHIIPR 108 (145)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEE
T ss_pred CEEEEEcCCcCCCCCcCEEEEEEEcc
Confidence 99999999999999999999999997
No 17
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.94 E-value=6.2e-27 Score=198.52 Aligned_cols=98 Identities=9% Similarity=0.237 Sum_probs=83.7
Q ss_pred CCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHH-HHHHHHhCCCC
Q psy9252 170 HEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLC-QKFAFDLKMRE 248 (346)
Q Consensus 170 ~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va-~kVlk~lgL~~ 248 (346)
++|+||+|+++|.+ +++||||++|+||+|++|.+|||+|||||+|++++.+|+++++..+..+++.+ +.+.+.++ ++
T Consensus 5 ~~CiFC~i~~~e~p-~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~ 82 (138)
T 3p0t_A 5 MASIFTKIINRELP-GRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFR-TE 82 (138)
T ss_dssp HHHHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CS
T ss_pred CCChhhHHhcCCCC-cCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 47999999999998 89999999999999999999999999999999999999999877777766633 33333456 56
Q ss_pred CeEEEEecCCCCCCccceeeEEEecC
Q psy9252 249 GYRVVINNGHAGNHNLTHFNILLIGG 274 (346)
Q Consensus 249 GYnm~~N~Gp~AGqsV~HLHLHIIPr 274 (346)
++|+. .+||+|+|+|+|||||
T Consensus 83 ~~n~~-----~~gq~v~HlH~HiiPr 103 (138)
T 3p0t_A 83 RSGLI-----IAGLEVPHLHVHVFPT 103 (138)
T ss_dssp EEEEE-----ECCSSCSSCCEEEEEE
T ss_pred CCcEE-----ECCcccCEEEEEEecc
Confidence 77774 3799999999999998
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.90 E-value=6.2e-24 Score=183.38 Aligned_cols=97 Identities=8% Similarity=0.135 Sum_probs=82.2
Q ss_pred CCCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHH-HhCC
Q psy9252 168 YDHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAF-DLKM 246 (346)
Q Consensus 168 ~~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk-~lgL 246 (346)
+++.|+||+++ + +++||||++|+||+|++|.+|||+||+||+|++++.+|+++++..|..+++.+.+.++ .++
T Consensus 8 ~~~~C~FC~~~----~-~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~- 81 (154)
T 2oik_A 8 FHKNCELCTTA----G-GEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMR- 81 (154)
T ss_dssp CCTTCHHHHSC----C-SEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCccCCCC----C-CeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 45789999854 4 6899999999999999999999999999999999999999998888777774444443 445
Q ss_pred CCCeEEEEecCCCCCCccceeeEEEecCC
Q psy9252 247 REGYRVVINNGHAGNHNLTHFNILLIGGR 275 (346)
Q Consensus 247 ~~GYnm~~N~Gp~AGqsV~HLHLHIIPrd 275 (346)
++|||++ .+||+++|+|+|||||.
T Consensus 82 ~~g~ni~-----~~gq~v~HlHiHiiPr~ 105 (154)
T 2oik_A 82 PDKINLA-----SLGNMTPHVHWHVIPRF 105 (154)
T ss_dssp CSEEEEE-----ECCSSSCSCEEEEEEEC
T ss_pred CCcEEhH-----HhCCCCCEEEEEEeCCC
Confidence 5789997 36899999999999973
No 19
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.90 E-value=1.9e-23 Score=178.79 Aligned_cols=103 Identities=10% Similarity=0.189 Sum_probs=84.1
Q ss_pred ccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHH-HhCCCCCeE
Q psy9252 173 LYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAF-DLKMREGYR 251 (346)
Q Consensus 173 VFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk-~lgL~~GYn 251 (346)
.||.+. ++..+|||||++|+||+|++|.+|||+|||||+|++++.+|+++++..+..+++.+.+.++ .++ ++|||
T Consensus 4 ~f~~~~---ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~~~n 79 (147)
T 1fit_A 4 RFGQHL---IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFH-GTSLT 79 (147)
T ss_dssp EETTEE---ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred EecCcc---cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEE
Confidence 466542 3336999999999999999999999999999999999999999987776666663333333 334 57999
Q ss_pred EEEecCCCCCCccceeeEEEecCCCCCC
Q psy9252 252 VVINNGHAGNHNLTHFNILLIGGRQMRY 279 (346)
Q Consensus 252 m~~N~Gp~AGqsV~HLHLHIIPrdkLkw 279 (346)
+++|+|+.+||+|+|+|+|||||.+..|
T Consensus 80 i~~n~g~~agq~v~HlH~HiiPr~~~d~ 107 (147)
T 1fit_A 80 FSMQDGPEAGQTVKHVHVHVLPRKAGDF 107 (147)
T ss_dssp EEECCSGGGTCCSSSCCEEEEEECTTC-
T ss_pred EEEecCCccCCCccEEEEEEECCcCCCC
Confidence 9999999999999999999999855443
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.88 E-value=6.4e-23 Score=201.61 Aligned_cols=106 Identities=10% Similarity=0.189 Sum_probs=88.6
Q ss_pred CCCCccccccccccCCccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHHHHHHHHH-HhCCC
Q psy9252 169 DHEKLYDKILRNKFKYKKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFHLCQKFAF-DLKMR 247 (346)
Q Consensus 169 ~~~CVFCdIi~~E~~~~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~va~kVlk-~lgL~ 247 (346)
.+.|+||+ +|.+..+|||||++|+||+|++|.+|||+|||||+|+.++.+|+++++..|..+++.+.+.++ .++ +
T Consensus 296 ~~~c~fc~---~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~-~ 371 (440)
T 1ems_A 296 TGGLKFAR---FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHN-V 371 (440)
T ss_dssp SSCCEETT---EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred cCceeeec---cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcC-C
Confidence 46899998 566634899999999999999999999999999999999999999987666666653333332 335 5
Q ss_pred CCeEEEEecCCCCCCccceeeEEEecCCCCC
Q psy9252 248 EGYRVVINNGHAGNHNLTHFNILLIGGRQMR 278 (346)
Q Consensus 248 ~GYnm~~N~Gp~AGqsV~HLHLHIIPrdkLk 278 (346)
+|||+++|+|+.+||+|+|+|+|||||.+..
T Consensus 372 ~~~n~~~~~g~~~gq~v~HlH~Hiipr~~~d 402 (440)
T 1ems_A 372 TSTTICVQDGKDAGQTVPHVHIHILPRRAGD 402 (440)
T ss_dssp SEEEEECCCSGGGTCCSSSCCEEEEEECSSC
T ss_pred CCeEEEEecCCCCCCCccEEEEEEeCCCCCC
Confidence 7999999999999999999999999985443
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.75 E-value=8.1e-18 Score=144.12 Aligned_cols=84 Identities=13% Similarity=0.031 Sum_probs=72.6
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHH-HHHHHHHHhCCCCCeEEEEecCCCCCCc
Q psy9252 185 KKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFH-LCQKFAFDLKMREGYRVVINNGHAGNHN 263 (346)
Q Consensus 185 ~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~-va~kVlk~lgL~~GYnm~~N~Gp~AGqs 263 (346)
..+|+++++|+++++.+|.+|||++|+||+|++++.||++++...+...+. +++.+.+.++ ++|+|++ .+||+
T Consensus 13 ~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~-----~aGq~ 86 (137)
T 3ohe_A 13 THKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFG-GDKMNVA-----ALGNM 86 (137)
T ss_dssp EEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEE-----ECCSS
T ss_pred cEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEe-----eccCc
Confidence 589999999999999999999999999999999999999998765555444 5555555667 5788876 67999
Q ss_pred cceeeEEEecC
Q psy9252 264 LTHFNILLIGG 274 (346)
Q Consensus 264 V~HLHLHIIPr 274 (346)
|+|+|+|||||
T Consensus 87 V~HlH~HviPR 97 (137)
T 3ohe_A 87 VPQLHLHHIVR 97 (137)
T ss_dssp CCSCCEEEEEE
T ss_pred CCEEEEEEeCC
Confidence 99999999998
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.75 E-value=4.8e-18 Score=147.95 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=72.3
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCHHHHHHHHHHHH-HHHHHHHHhCCCCCeEEEEecCCCCCCc
Q psy9252 185 KKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQEEDAFLLGHMFH-LCQKFAFDLKMREGYRVVINNGHAGNHN 263 (346)
Q Consensus 185 ~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~eE~~~La~Ll~-va~kVlk~lgL~~GYnm~~N~Gp~AGqs 263 (346)
+.+|++++.|+||++.+|.+|||++|+||+|++++.||++++...+...+. +++.+.+.++ ++|+|++ .+||+
T Consensus 13 ~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~-~~~~Ni~-----~aGq~ 86 (149)
T 3i24_A 13 CIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFS-PDKINIG-----ALGNL 86 (149)
T ss_dssp EEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHC-CSEEEEE-----ECCSS
T ss_pred CEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEh-----hhhCC
Confidence 589999999999999999999999999999999999999998766655554 5555555667 5788886 37999
Q ss_pred cceeeEEEecC
Q psy9252 264 LTHFNILLIGG 274 (346)
Q Consensus 264 V~HLHLHIIPr 274 (346)
|+|+|+|||||
T Consensus 87 V~HlH~HvIPR 97 (149)
T 3i24_A 87 VPQLHIHHIAR 97 (149)
T ss_dssp CCSCCEEEEEE
T ss_pred CCEEEEEEeCC
Confidence 99999999997
No 23
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.73 E-value=3e-18 Score=157.01 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=98.6
Q ss_pred EEEECCeEEEEecCCCCCCceEEEEeccCCCCcccCCH---HHHHHHHHHHHHHH-HHHH-Hh--------CCC--CCeE
Q psy9252 187 VIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAEAQE---EDAFLLGHMFHLCQ-KFAF-DL--------KMR--EGYR 251 (346)
Q Consensus 187 VVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~dLt~---eE~~~La~Ll~va~-kVlk-~l--------gL~--~GYn 251 (346)
+|||||.++||.|++|.+|||+|||||+|+.++.++.+ ++...+.+|..++. ++++ .+ +++ .||.
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 99999999999999999999999999999999876543 34567788888777 5333 22 232 2555
Q ss_pred EEEecCCCCCCccceeeEEEecCCCCCCCCCCCcchhhhhhhhhhhcccccCchhhhhhhhhhhhhhhhhhhHHHHHHHH
Q psy9252 252 VVINNGHAGNHNLTHFNILLIGGRQMRYPKYYDLSHFNSYASEVDHCLSTYGDDFKLSGRMADFLGSYGSLKAKRAKWLS 331 (346)
Q Consensus 252 m~~N~Gp~AGqsV~HLHLHIIPrdkLkw~aGsdtnf~~s~a~~i~~~l~~yg~~~kl~~~~~~~~~~~~~lk~~~a~~l~ 331 (346)
..+|.|..+++++.|||+|||+.|..+ +..+..+|||+|.+.+...+. + .|.+. .+..++ -+.
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~Df~s-~~lK~kkH~NSF~T~fFv~~~-~----~l~~~--------~~~~~~---~~l 165 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLDHVS-PSLKNSAHYISFTSPFFVKID-T----PTSNL--------PTRGTL---TSL 165 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESCCCC-TTCCSHHHHHHHHSTTEEETT-C----CGGGC--------CCGGGG---GGG
T ss_pred eeEeccCCCCCcccceeEEEeccCCCC-hhhCccchhcccChhhhccch-h----hhhhc--------cccCHh---hhh
Confidence 566777777889999999999976433 333678999999997765444 2 22111 111222 444
Q ss_pred hhCCCCCCCCc
Q psy9252 332 SKYPKMCLPSE 342 (346)
Q Consensus 332 ~~~~~~~~~~~ 342 (346)
++.|++|+--.
T Consensus 166 ~~~~L~C~~C~ 176 (204)
T 3sp4_A 166 FQEDLKCWRCG 176 (204)
T ss_dssp GGSCCBCTTTC
T ss_pred cCCCceeCCCC
Confidence 57899997644
No 24
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.66 E-value=5.2e-16 Score=132.42 Aligned_cols=83 Identities=13% Similarity=0.112 Sum_probs=69.1
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEec-cCCCCcccCCHHHHHHHHHHHH-HHHHHHHHhCCCCCeEEEEecCCCCCC
Q psy9252 185 KKVIYNDSLCWAYRELTKLAPVYINIIPK-KNLTSLAEAQEEDAFLLGHMFH-LCQKFAFDLKMREGYRVVINNGHAGNH 262 (346)
Q Consensus 185 ~rVVyEdE~fvAf~p~~P~sPGHvLVIPK-RHV~sL~dLt~eE~~~La~Ll~-va~kVlk~lgL~~GYnm~~N~Gp~AGq 262 (346)
..+|++++.|+++++.+|.+|| ++|||| +|++++.||++++...+...+. +++.+.+.++ ++|+|++ .+||
T Consensus 15 ~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~-----~aGq 87 (135)
T 3nrd_A 15 GIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATG-AEKINIG-----ALGN 87 (135)
T ss_dssp EEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE-----ECCS
T ss_pred CEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe-----eccC
Confidence 5899999999999999999995 688888 7999999999998765555555 4455555667 5788775 6799
Q ss_pred ccceeeEEEecC
Q psy9252 263 NLTHFNILLIGG 274 (346)
Q Consensus 263 sV~HLHLHIIPr 274 (346)
+|+|+|+|||||
T Consensus 88 ~V~HlH~HviPR 99 (135)
T 3nrd_A 88 IVRQLHVHVIAR 99 (135)
T ss_dssp SCCSCCEEEEEE
T ss_pred CCCEEEEEEecC
Confidence 999999999998
No 25
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.56 E-value=2.4e-14 Score=124.66 Aligned_cols=83 Identities=10% Similarity=0.072 Sum_probs=66.0
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEecc-CCCCcccCCHHHHHHHHHHHH-HHHHHHHHhCCCCCeEEEEecCCCCCC
Q psy9252 185 KKVIYNDSLCWAYRELTKLAPVYINIIPKK-NLTSLAEAQEEDAFLLGHMFH-LCQKFAFDLKMREGYRVVINNGHAGNH 262 (346)
Q Consensus 185 ~rVVyEdE~fvAf~p~~P~sPGHvLVIPKR-HV~sL~dLt~eE~~~La~Ll~-va~kVlk~lgL~~GYnm~~N~Gp~AGq 262 (346)
..++++...++++++..+. ++|+|||||+ |+.++.||++++...+..++. +++.+.+.++ ++|||++ .+||
T Consensus 18 ~~~~~e~p~~~v~l~~~~~-~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~-~~g~N~~-----~aGq 90 (149)
T 3i4s_A 18 TIDIGDLPLSKVLVIKDAN-YPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITK-CDKLNIA-----ALGN 90 (149)
T ss_dssp EEEEEECSSEEEEEESCTT-SCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE-----ECCS
T ss_pred CEEEEEcCceEEEECCCCC-CCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe-----ecCC
Confidence 5799999999999996664 5599999999 899999999988655555555 3333333455 5788775 6799
Q ss_pred ccceeeEEEecC
Q psy9252 263 NLTHFNILLIGG 274 (346)
Q Consensus 263 sV~HLHLHIIPr 274 (346)
+|+|+|+|||||
T Consensus 91 ~V~HlH~HvIPR 102 (149)
T 3i4s_A 91 LVPQLHVHIIAR 102 (149)
T ss_dssp SCCSCCEEEEEE
T ss_pred cCCEEEEEEECC
Confidence 999999999997
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=98.95 E-value=2.6e-09 Score=102.89 Aligned_cols=98 Identities=18% Similarity=0.280 Sum_probs=83.5
Q ss_pred cccccccccCCccEEEECCe----EEEEecCC----CCCCceEEEEeccC-CCCcccCCHHHHHHHHHHHHHHHHHHHH-
Q psy9252 174 YDKILRNKFKYKKVIYNDSL----CWAYRELT----KLAPVYINIIPKKN-LTSLAEAQEEDAFLLGHMFHLCQKFAFD- 243 (346)
Q Consensus 174 FCdIi~~E~~~~rVVyEdE~----fvAf~p~~----P~sPGHvLVIPKRH-V~sL~dLt~eE~~~La~Ll~va~kVlk~- 243 (346)
.-+|+.+..+..+|||+|+. |+++-|.. |.++-|+++||++| +.|+.+|+.++...|..|...+.+++..
T Consensus 140 v~nIl~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~ 219 (301)
T 3bl9_A 140 VYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQR 219 (301)
T ss_dssp HHHHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHh
Confidence 33577664332699999988 99999987 78999999999988 9999999999999999999999988875
Q ss_pred hCC-CCCeEEEEecCCCCCCccceeeEEEecCC
Q psy9252 244 LKM-REGYRVVINNGHAGNHNLTHFNILLIGGR 275 (346)
Q Consensus 244 lgL-~~GYnm~~N~Gp~AGqsV~HLHLHIIPrd 275 (346)
+|+ .+.+++++|..| ++.|||+||+..+
T Consensus 220 y~~~~~~~rlgfHy~P----S~yHLHlHvis~~ 248 (301)
T 3bl9_A 220 YRMKGDHLRVYLHYLP----SYYHLHVHFTALG 248 (301)
T ss_dssp HCCCGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred cCCChHHeEEEecCCC----CcceEEEEEEecC
Confidence 466 457999999887 7899999999854
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=98.90 E-value=3.8e-09 Score=103.34 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=82.0
Q ss_pred cccccccccCCccEEEECCe----EEEEecCC----CCCCceEEEEeccC-CCCcccCCHHHHHHHHHHHHHHHHHHHH-
Q psy9252 174 YDKILRNKFKYKKVIYNDSL----CWAYRELT----KLAPVYINIIPKKN-LTSLAEAQEEDAFLLGHMFHLCQKFAFD- 243 (346)
Q Consensus 174 FCdIi~~E~~~~rVVyEdE~----fvAf~p~~----P~sPGHvLVIPKRH-V~sL~dLt~eE~~~La~Ll~va~kVlk~- 243 (346)
.-+|+.+..+..+|||+|+. |++|.|.. |.++-|+|+||++| +.|+.+|+.++...|..|...+.+++..
T Consensus 187 v~nIl~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~ 266 (350)
T 1vlr_A 187 VYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKR 266 (350)
T ss_dssp HHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHh
Confidence 33577664332699999988 99999987 78999999999988 9999999999999999999999988875
Q ss_pred hCC-CCCeEEEEecCCCCCCccceeeEEEecCC
Q psy9252 244 LKM-REGYRVVINNGHAGNHNLTHFNILLIGGR 275 (346)
Q Consensus 244 lgL-~~GYnm~~N~Gp~AGqsV~HLHLHIIPrd 275 (346)
+++ .+.+++++|..| ++.|||+|||..+
T Consensus 267 yg~~~~~lRlgfHy~P----S~yHLHlHvis~~ 295 (350)
T 1vlr_A 267 YQVTGDRLRVYLHYLP----SYYHLHVHFTALG 295 (350)
T ss_dssp HCCCGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred cCCChHHeEEEecCCC----CcceEEEEEEecc
Confidence 466 457999999887 7899999999854
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.62 E-value=1.5e-07 Score=91.59 Aligned_cols=101 Identities=9% Similarity=-0.048 Sum_probs=73.3
Q ss_pred CCCccccccccccCC--ccEEE--ECCeEEEEecCCCCCC------------c-----------eEEEEeccCCCCcccC
Q psy9252 170 HEKLYDKILRNKFKY--KKVIY--NDSLCWAYRELTKLAP------------V-----------YINIIPKKNLTSLAEA 222 (346)
Q Consensus 170 ~~CVFCdIi~~E~~~--~rVVy--EdE~fvAf~p~~P~sP------------G-----------HvLVIPKRHV~sL~dL 222 (346)
..|+||.-.....+. ..++. .+-.+++|.|.||+.+ | +|+|.+.+|..++.+|
T Consensus 61 ~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~l 140 (351)
T 1z84_A 61 SSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDI 140 (351)
T ss_dssp CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGS
T ss_pred CCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHC
Confidence 479999643322221 12222 4567999999999994 4 8999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEecCCCCCCccceeeEEEec
Q psy9252 223 QEEDAFLLGHMFHLCQKFAFDLKM---REGYRVVINNGHAGNHNLTHFNILLIG 273 (346)
Q Consensus 223 t~eE~~~La~Ll~va~kVlk~lgL---~~GYnm~~N~Gp~AGqsV~HLHLHIIP 273 (346)
+.+++..+-.+.. +-.+.++- ...++++.|.|+.+|.++.|.|.||+.
T Consensus 141 s~~e~~~vi~~~~---~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a 191 (351)
T 1z84_A 141 DPVGIGDILIAYK---KRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMA 191 (351)
T ss_dssp CHHHHHHHHHHHH---HHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEE
T ss_pred CHHHHHHHHHHHH---HHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEe
Confidence 9987644444433 33333421 247889999999999999999999996
No 29
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=96.16 E-value=0.019 Score=55.37 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=44.6
Q ss_pred eEEEEeccCCCCcccCCHHHHHHHHHHHH-HHHHHHHHhCCCCCeE-EEEecCCCCCCccceeeEEEec
Q psy9252 207 YINIIPKKNLTSLAEAQEEDAFLLGHMFH-LCQKFAFDLKMREGYR-VVINNGHAGNHNLTHFNILLIG 273 (346)
Q Consensus 207 HvLVIPKRHV~sL~dLt~eE~~~La~Ll~-va~kVlk~lgL~~GYn-m~~N~Gp~AGqsV~HLHLHIIP 273 (346)
.|+|..-+|-.++.+++.++...+-.+.. ...++...+ .|- +.-|-|+.+|.|+.|-|.+|+.
T Consensus 107 ~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~~----~yV~iF~N~G~~~G~Sl~HpH~Qi~a 171 (348)
T 1gup_A 107 RVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTY----PWVQVFENKGAAMGCSNPHPGGQIWA 171 (348)
T ss_dssp EEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHC----SEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred EEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhcC----CEEEEecccCCcCCcCCCCCceeEEe
Confidence 67777779999999999887654444333 222222111 244 5668899999999999999985
No 30
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=93.42 E-value=0.093 Score=48.77 Aligned_cols=85 Identities=8% Similarity=0.110 Sum_probs=56.9
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccCCCCccc---CCHHHHHHHHHHHHHHHHHHHHhC--CC-CCeEEEEecCC
Q psy9252 185 KKVIYNDSLCWAYRELTKLAPVYINIIPKKNLTSLAE---AQEEDAFLLGHMFHLCQKFAFDLK--MR-EGYRVVINNGH 258 (346)
Q Consensus 185 ~rVVyEdE~fvAf~p~~P~sPGHvLVIPKRHV~sL~d---Lt~eE~~~La~Ll~va~kVlk~lg--L~-~GYnm~~N~Gp 258 (346)
+.-|.....+++|-| +..|.|+|+||-..++-+++ +++....-++.....-.-+.+++| ++ +.+-+.+|..
T Consensus 31 C~~Vd~~~gyvvlKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~- 107 (227)
T 2pof_A 31 CAEVKPNAGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSR- 107 (227)
T ss_dssp SSEEETTTTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCG-
T ss_pred CceEccCCCEEEEeC--CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCC-
Confidence 455566677777777 66999999999999877665 444444445555553334555665 33 3566677754
Q ss_pred CCCCccceeeEEEec
Q psy9252 259 AGNHNLTHFNILLIG 273 (346)
Q Consensus 259 ~AGqsV~HLHLHIIP 273 (346)
.|.+-.+||+||--
T Consensus 108 -~gRSQnQLHIHIsC 121 (227)
T 2pof_A 108 -TGRTQNHFHIHISC 121 (227)
T ss_dssp -GGCSCCSCCEEEEE
T ss_pred -CCccccceeeehhh
Confidence 47888899999864
No 31
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=49.46 E-value=21 Score=29.71 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=20.6
Q ss_pred CCCeEEEEecCCCCCCccceeeEEEe
Q psy9252 247 REGYRVVINNGHAGNHNLTHFNILLI 272 (346)
Q Consensus 247 ~~GYnm~~N~Gp~AGqsV~HLHLHII 272 (346)
.+..+|.+| +...|.+++|.|+|++
T Consensus 76 vDHVdi~~~-~gHpGve~PHyhI~l~ 100 (116)
T 3vg8_G 76 IDHVNMIPS-GPHPGVSEPHYHIELV 100 (116)
T ss_dssp CCEEEEEEC-CCCTTCCSCEEEEEEE
T ss_pred cceEEEecC-CCCCCcccCceEEEEE
Confidence 368899997 5556899999999986
No 32
>2yzt_A Putative uncharacterized protein TTHA1756; uncharacterized conserved protein, structural genomics, UNKN function, NPPSFA; 1.80A {Thermus thermophilus}
Probab=24.58 E-value=19 Score=26.39 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=16.6
Q ss_pred CCCCCCCCCCcHHHHHHHHhhhh
Q psy9252 82 TVPPGHPGGDTLEEVIRNCKHLD 104 (346)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~ 104 (346)
.+|- +.-|+|++|+++++.+..
T Consensus 23 dlpg-~t~G~T~eEa~~~~~eAi 44 (67)
T 2yzt_A 23 ELHA-HTQAQSFEELLRRLQEAI 44 (67)
T ss_dssp GGTE-EEEESSHHHHHHHHHHHH
T ss_pred CCCC-ceeeCCHHHHHHHHHHHH
Confidence 3444 778999999998877643
Done!