RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9256
(265 letters)
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 148 bits (377), Expect = 9e-44
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
R K V +TGAS GIG +A L+K GA +V++ARS L++V + C++ GA S
Sbjct: 22 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 79
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
+ + + + + + G LD+LI N + ++ R+
Sbjct: 80 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM 134
Score = 108 bits (273), Expect = 2e-28
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
S + + + + + + G LD+LI N + ++ R+ E+N
Sbjct: 78 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 137
Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
S + L+ A ++ G +VV SS+AG V P +Y
Sbjct: 138 FLSYVVLTVAALPML--KQSNGSIVVVSSLAGKVAYPMVAAY 177
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 116 bits (292), Expect = 3e-31
Identities = 47/221 (21%), Positives = 82/221 (37%), Gaps = 67/221 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F+ K V ITG+S+GIG + A+ +K GA++ ++ R+ LE K ++AG + I +
Sbjct: 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRELFTYAYRPS 161
DVT+ + + +FG +DIL+NNAG + A D +E+
Sbjct: 84 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVEL------------ 131
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
+ + LN
Sbjct: 132 -----------------YQKTFK---------------------------------LNFQ 141
Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSI-AGIVGAPYSGSY 261
+V+ +++ + + + G +V SSI AG Y
Sbjct: 142 AVIEMTQKTKEHLI--KTKGEIVNVSSIVAGPQAHSGYPYY 180
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 115 bits (291), Expect = 4e-31
Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 61/220 (27%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F KV ITG+S+GIG A A+ ++ GAK+ ++ R + LE + + AG Q++ ++
Sbjct: 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DVT + +FG LDIL+NNAG + + E
Sbjct: 64 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES---------- 113
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+DA + LN+ SV
Sbjct: 114 ---------------YDATLN---------------------------------LNLRSV 125
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIA-GIVGAPYSGSYT 262
++L++ A + G +V SSIA G+ P Y+
Sbjct: 126 IALTKKAVPHL--SSTKGEIVNISSIASGLHATPDFPYYS 163
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 114 bits (287), Expect = 8e-31
Identities = 33/108 (30%), Positives = 52/108 (48%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ ITGAS GIG +A L+ G ++VL ARS NLE+V + +++ H Q L
Sbjct: 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
LD+T + Q++G +DIL+N A + + +
Sbjct: 65 PLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRK 112
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 114 bits (288), Expect = 1e-30
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 61/219 (27%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F+NK V ITG+S+GIG A+ ++ GA + ++ RSS LE + + +++G + + ++
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DVT + ++ ++QFG +D+L+NNAG + A+ + ++
Sbjct: 64 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDI---------- 113
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ ++ LN+ +V
Sbjct: 114 ---------------YHKTLK---------------------------------LNLQAV 125
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSI-AGIVGAPYSGSY 261
+ +++ + G +V SSI AG P Y
Sbjct: 126 IEMTKKVKPHL--VASKGEIVNVSSIVAGPQAQPDFLYY 162
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 106 bits (267), Expect = 4e-28
Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+ + +TGA SG+G AL + L + G ++ + R L++ ++ +
Sbjct: 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ------ELLLGNAVIGIV 55
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
D+ + F A ++ G +++++ AG + E R +
Sbjct: 56 ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVM 105
Score = 92.6 bits (231), Expect = 7e-23
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ D+ + F A ++ G +++++ AG + E R + E N+ S
Sbjct: 53 GIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVST 112
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ +++ E+GG L S A VG Y
Sbjct: 113 ILVAQQTVRLI--GERGGVLANVLSSAAQVGKANESLY 148
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 106 bits (268), Expect = 6e-28
Identities = 46/219 (21%), Positives = 68/219 (31%), Gaps = 66/219 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+KVV I+G +G LA + ++ GA LVL+AR+ LE V G S+ T
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT- 67
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+T D ++ +G +D++INNA R
Sbjct: 68 --DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMK-------------------PFA 106
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
T + I EL VF
Sbjct: 107 NTTFEH---------MRDAI---------------------------------ELTVFGA 124
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
L L + T E G +V +S+ G+Y
Sbjct: 125 LRLIQGFTPAL--EESKGAVVNVNSMVVRHSQAKYGAYK 161
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 106 bits (266), Expect = 8e-28
Identities = 31/218 (14%), Positives = 53/218 (24%), Gaps = 67/218 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
N V + GA IG +A + + G + R+ L + AG I
Sbjct: 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG---RIVAR 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+LD +A L++ I N G + + V
Sbjct: 62 SLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPILETTDRV-------------- 106
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
F V E+ ++
Sbjct: 107 ---------------FRKVW---------------------------------EMACWAG 118
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
R + LA G + T + A + G ++
Sbjct: 119 FVSGRESARLMLAH-GQGKIFFTGATASLRGGSGFAAF 155
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 106 bits (266), Expect = 9e-28
Identities = 22/94 (23%), Positives = 47/94 (50%)
Query: 42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
+ N++++ +TGAS GIG A+ ++ GA ++L R+ L +V + + +
Sbjct: 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWF 67
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
L L ++ ++ + + LD +++NAG
Sbjct: 68 ILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAG 101
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 106 bits (267), Expect = 1e-27
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Query: 31 LFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC 90
L+F + KR ++V ITGA GIG A + +K +KLVL + LE C
Sbjct: 16 LYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC 75
Query: 91 VQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
GA ++T +D + + V + G + IL+NNAG + +
Sbjct: 76 KGLGA---KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQI 132
Query: 151 RELF 154
+ F
Sbjct: 133 EKTF 136
Score = 79.2 bits (196), Expect = 1e-17
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
++T +D + + V + G + IL+NNAG + + + F
Sbjct: 77 GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTF 136
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
E+NV + ++ GH+V +S AG V P+ +Y
Sbjct: 137 EVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVPFLLAYC 181
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 105 bits (265), Expect = 1e-27
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+V+ +TGA+ GIG A A + GA +VL R+ ++L V + AG I L
Sbjct: 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
L+ + +R V +FG LD L++NA
Sbjct: 72 NLENATAQQYRELAARVEHEFGRLDGLLHNAS 103
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 105 bits (264), Expect = 4e-27
Identities = 43/219 (19%), Positives = 66/219 (30%), Gaps = 62/219 (28%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F ++ +TG SGIG+ +A L GA +++ R+ L GA+ +I
Sbjct: 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+T R DAV G L +++ AG S+
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIG---------------------- 106
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
V AW +LNV
Sbjct: 107 -PITQVDS------------------------------EAWRRT--------VDLNVNGT 127
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + + A + GG V SSIA + G+Y
Sbjct: 128 MYVLKHAAREMVRG-GGGSFVGISSIAASNTHRWFGAYG 165
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 101 bits (254), Expect = 4e-26
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
KV ITGAS GIGEA+A L++ G L L ARS LE++ + +Q ++ L
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHL 59
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
DV++ + V+++FG +D+++ NAG E++ E
Sbjct: 60 DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEE 102
Score = 75.3 bits (186), Expect = 2e-16
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
++ LDV++ + V+++FG +D+++ NAG E++ E E+
Sbjct: 49 EQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMI 108
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV---GAPYSGS 260
E+N+ V + G LV TS ++ + G Y +
Sbjct: 109 EVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVST 154
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 101 bits (255), Expect = 4e-26
Identities = 46/221 (20%), Positives = 73/221 (33%), Gaps = 70/221 (31%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
K+ +TGA SG+G A+A+ L+ G + L+ R L+ A +
Sbjct: 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET------AAEIGDDALCV 79
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFTYAYRPSI 162
DVT R F A +++FG +D+L NNAG A ED+
Sbjct: 80 PTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQ------------- 126
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
+ V+ + N+
Sbjct: 127 ----------------WKQVV---------------------------------DTNLTG 137
Query: 223 VLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYT 262
++ A A+E +GG ++ SI+ PYS YT
Sbjct: 138 PFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT 178
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 100 bits (251), Expect = 2e-25
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
+ + +++ +TGAS GIG A+A L + G K+V AR+ N+E + C AG +P
Sbjct: 24 RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YP 82
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
++ D++ + F A+ Q +DI INNAG ++
Sbjct: 83 GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTS 133
Score = 70.0 bits (172), Expect = 2e-14
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 207
E+ E + Y ++ D++ + F A+ Q +DI INNAG ++
Sbjct: 71 ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSG 130
Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGS 260
+++F +NV ++ +R A R GH++ +S++G P S +
Sbjct: 131 STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 184
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 98.4 bits (246), Expect = 3e-25
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
V ITGA+ G+G A A L G L+LS R + L L + GA L D+
Sbjct: 3 VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAE---LAREVGAR-----ALPADLA 52
Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
A++++ G LD+L++ G++ RA+ + ++ E+
Sbjct: 53 D----ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEML 94
Score = 84.5 bits (210), Expect = 4e-20
Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
L D+ A++++ G LD+L++ G++ RA+ + ++ E+ ++ +
Sbjct: 46 ALPADLAD----ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTA 101
Query: 224 LSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
+ + AR Q V + V P +Y
Sbjct: 102 AFVLK------HARFQKGARAVFFGAYPRYVQVPGFAAY 134
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 98.8 bits (247), Expect = 6e-25
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
+K ++ + +V +TGAS GIG A+A +L GA++VL+AR L V+ V AG
Sbjct: 21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-- 78
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ D++ + V+ G D+L+NNAG
Sbjct: 79 -EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG 115
Score = 58.7 bits (143), Expect = 2e-10
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 22/109 (20%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG---------RSQRAAWEDIELEVDREL 215
D++ + V+ G D+L+NNAG + A W+ +
Sbjct: 83 HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDAL-------- 134
Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
+N+ + L R +A + GH++ SS+AG Y+ S
Sbjct: 135 IAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPVADGAAYTAS 182
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 98.8 bits (247), Expect = 6e-25
Identities = 44/219 (20%), Positives = 75/219 (34%), Gaps = 64/219 (29%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ K ITGA+ GIG +A + GA+LVLS R S L+ + + ++T+
Sbjct: 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTV 75
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+D+ + + FG LD+L+NNAG S D + ++
Sbjct: 76 AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL-------------- 121
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
FDA I +N+ +
Sbjct: 122 ---------------FDATI---------------------------------AVNLRAP 133
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
L+ +A +GG ++ +S A + P +Y
Sbjct: 134 ALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC 172
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 98.0 bits (245), Expect = 8e-25
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
KV ITGASSGIGEA A L+ GA + ++AR +E+++ L + A ++ L
Sbjct: 6 QGKVALITGASSGIGEATARALAAEGAAVAIAAR---RVEKLRALGDELTAAGAKVHVLE 62
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
LDV + + ++ G LDIL+NNAG
Sbjct: 63 LDVADRQGVDAAVASTVEALGGLDILVNNAG 93
Score = 64.1 bits (157), Expect = 2e-12
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
++ L LDV + + ++ G LDIL+NNAG ED + + + N+
Sbjct: 57 KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNL 116
Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
++ ++R A + G +V SSIAG V A Y +
Sbjct: 117 LGLMYMTRAALPHL--LRSKGTVVQMSSIAGRVNVRNAAVYQAT 158
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 99.8 bits (249), Expect = 8e-25
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARS--SSNLERVKNLCVQAGAHPQSIYT 102
+ K++ ITGASSG G A L+ G ++ S R N V+ + A + + T
Sbjct: 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
L LDV R D +I + G +D+LI+NAG E E EL+
Sbjct: 64 LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELY 115
Score = 92.1 bits (229), Expect = 5e-22
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
+ TL LDV R D +I + G +D+LI+NAG E E EL+
Sbjct: 56 DNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELY 115
Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVG-APYSGSY 261
++NV S ++R A + R Q G L+ SS + G PY Y
Sbjct: 116 DINVLSTQRVNRAALPHM--RRQKHGLLIWISSSSSAGGTPPYLAPY 160
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 97.9 bits (245), Expect = 9e-25
Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 73/219 (33%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ V +TGA GIG L GA++V +R+ ++L+ + C +
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP-------V 57
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+D+ + + G +D+L+NNA + + ++ E
Sbjct: 58 CVDLGD----WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEA-------------- 99
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
FD E+N+ +V
Sbjct: 100 ---------------FDRSF---------------------------------EVNLRAV 111
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ +S+I +AR G +V SS Y
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYC 150
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 98.8 bits (247), Expect = 9e-25
Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 66/221 (29%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
++ +TG +G+G +A LS G +V++ R L+ + + +
Sbjct: 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN--IVRAV 88
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPSI 162
DV F AV +F LD+L+NNAG + E++ E
Sbjct: 89 VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQ------------- 135
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
++ ++ N+
Sbjct: 136 ----------------WNGIV---------------------------------AANLTG 146
Query: 223 VLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYT 262
++ A A+ +GG ++ SI+ P S YT
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT 187
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 97.6 bits (244), Expect = 1e-24
Identities = 38/219 (17%), Positives = 66/219 (30%), Gaps = 73/219 (33%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F+ +TGA GIG L GAK+V R++S+L + C +
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP-------V 57
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+D+ + + G +D+L+NNA + ++ E
Sbjct: 58 CVDLGD----WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEA-------------- 99
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
FD +N+ SV
Sbjct: 100 ---------------FDRSF---------------------------------SVNLRSV 111
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+S++ + R G +V SS+ V P +Y+
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS 150
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 98.5 bits (246), Expect = 1e-24
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
AY ++LDVT + V+ ++G +D+L+NNAGR+Q A+E+ R+LF
Sbjct: 48 AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLF 107
Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
EL+VF L+R RE+G G +V SS G + +Y
Sbjct: 108 ELHVFGPARLTRALLPQM--RERGSGSVVNISSFGGQLSFAGFSAY 151
Score = 95.8 bits (239), Expect = 1e-23
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+ KV +TGASSG G A+A G ++ +AR E + +L A+P ++
Sbjct: 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR---RTEALDDL---VAAYPDRAEAIS 57
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
LDVT + V+ ++G +D+L+NNAGR+Q A+E+ R+LF
Sbjct: 58 LDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLF 107
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 99.0 bits (247), Expect = 1e-24
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
L F + ++TG ++G+G L QL G K+ ++ ++++ G+ P+
Sbjct: 2 SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+ + LDV + + D V +FG + IL NNAG + E+ +
Sbjct: 62 M-GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYD 109
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 98.0 bits (245), Expect = 1e-24
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+KV+ ITGAS GIGE +A +L GAK++L AR + +E + AG + L
Sbjct: 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG---TALAQVL 60
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DVT A + +G +D+L+NNAG
Sbjct: 61 DVTDRHSVAAFAQAAVDTWGRIDVLVNNAG 90
Score = 65.7 bits (161), Expect = 8e-13
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
+ LDVT A + +G +D+L+NNAG + ++++ + ++N+
Sbjct: 54 TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNI 113
Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
VL A+ + G ++ SI + A Y +
Sbjct: 114 KGVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSVVPTAAVYCAT 156
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 96.5 bits (241), Expect = 3e-24
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAK-------LVLSARSSSNLERVKNLCVQAGAHPQ 98
++ ITGA GIG A+AL+ ++ LVLS+R++++LE++ C GA
Sbjct: 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--- 58
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
T+T D++ RR +++++G +D L+NNAG
Sbjct: 59 LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAG 95
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 96.4 bits (241), Expect = 4e-24
Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 65/216 (30%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
K +TG++ G+G A A L+ GA+++L+ ++ L + + G + + D
Sbjct: 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFD 66
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLT 166
VT F + + +DILINNAG R ++ELE
Sbjct: 67 VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELEN----------------- 109
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
+ VI N+ S +
Sbjct: 110 ------------WQKVID---------------------------------TNLTSAFLV 124
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
SR A +AR GG ++ S+ P YT
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 96.1 bits (240), Expect = 6e-24
Identities = 45/216 (20%), Positives = 71/216 (32%), Gaps = 65/216 (30%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
KV +TGA GIG+A+AL+L K G + ++ + + + V + QAG + +
Sbjct: 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKV 58
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
DV+ + + G D+++NNAG + E I E+
Sbjct: 59 DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEI---------------- 102
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
D V +NV V+
Sbjct: 103 -------------VDKVY---------------------------------NINVKGVIW 116
Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ A F GG ++ S AG VG P Y
Sbjct: 117 GIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVY 152
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 96.5 bits (241), Expect = 6e-24
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ V ITGA SGIG A AL L+ G + R+ + +E V + V AG L
Sbjct: 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG---QAIAL 82
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV+ R ++ +FG LDI++ NAG
Sbjct: 83 EADVSDELQMRNAVRDLVLKFGHLDIVVANAG 114
Score = 58.8 bits (143), Expect = 2e-10
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSV 223
L DV+ R ++ +FG LDI++ NAG A +D++ E +N+
Sbjct: 82 LEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGT 141
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGI--VGAPYSGSYT 262
+ Y R GG +VV SSI G P + +YT
Sbjct: 142 FLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTPGATAYT 181
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 96.1 bits (240), Expect = 6e-24
Identities = 47/219 (21%), Positives = 69/219 (31%), Gaps = 63/219 (28%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F ++VV ITG SG+G A A++L+ GAKL L SS LE K ++ + +
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLT-T 69
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DV+ A ++FG +D NNAG +
Sbjct: 70 VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQN-------------------PTE 110
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ T FD V+ I N+ V
Sbjct: 111 SFTAAE---------FDKVV------SI---------------------------NLRGV 128
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ G +V T+S+ GI G Y
Sbjct: 129 FLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIGNQSGYA 166
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 95.3 bits (238), Expect = 1e-23
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
NKVV +TGA SGIG A+A + + + +V L ++ G + +
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK---EVLGV 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV++ K + + +D+L NNAG
Sbjct: 62 KADVSKKKDVEEFVRRTFETYSRIDVLCNNAG 93
Score = 63.3 bits (155), Expect = 5e-12
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSVLSL 226
DV++ K + + +D+L NNAG ++ E+ + +N++S
Sbjct: 64 DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
SR L + G +V T+SIAGI G YT
Sbjct: 124 SRAVIPIMLKQ-GKGVIVNTASIAGIRGGFAGAPYT 158
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 94.9 bits (237), Expect = 2e-23
Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 71/222 (31%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+ K ITGAS+GIG+ +AL ++ GA++ ++AR S L+ V + G +
Sbjct: 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG---KALPIR 87
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
DVTQ R D + + G +DI + NAG A D+ LE
Sbjct: 88 CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEE--------------- 132
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
F + NV V
Sbjct: 133 --------------FQRIQD---------------------------------TNVTGVF 145
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVG------APYSGS 260
++ A + + GG ++ T+S++G + + Y S
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTS 187
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 94.1 bits (235), Expect = 2e-23
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
V ITGAS GIGEA A L G ++ L AR + +R++ L + L
Sbjct: 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMAR---DEKRLQALAAELEG----ALPLPG 57
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
DV + R A+ + FG L L+NNAG ++ LE
Sbjct: 58 DVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLE 100
Score = 70.2 bits (173), Expect = 1e-14
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
L DV + R A+ + FG L L+NNAG ++ LE R + + N+
Sbjct: 53 LPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTG 112
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
R A L R GG +V S+AG +Y
Sbjct: 113 AFLGIRHAVPALLRR-GGGTIVNVGSLAGKNPFKGGAAYN 151
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 94.1 bits (235), Expect = 3e-23
Identities = 43/218 (19%), Positives = 68/218 (31%), Gaps = 67/218 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ K ITGA +GIG+ +A+ + GA +V+S ++ V + Q G +
Sbjct: 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFAC 65
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+T + D I + G +DIL+NNAG ++
Sbjct: 66 RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP-----FDMPMAD---------- 110
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
F ELNVFS
Sbjct: 111 ---------------FRRAY---------------------------------ELNVFSF 122
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
LS++ GG ++ +S+A SY
Sbjct: 123 FHLSQLVAPEMEKN-GGGVILTITSMAAENKNINMTSY 159
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 94.5 bits (236), Expect = 3e-23
Identities = 46/218 (21%), Positives = 68/218 (31%), Gaps = 68/218 (31%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ + +TG S GIG A+A L K GA + ++ + V G + +
Sbjct: 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG------FAV 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+DVT+ I G D+L NAG S DI E
Sbjct: 64 EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE-------------- 109
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+D ++N V
Sbjct: 110 ---------------WDFNF---------------------------------DVNARGV 121
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
++IA +FLA G +V T+S+A VGAP Y
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY 159
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 94.5 bits (236), Expect = 3e-23
Identities = 38/218 (17%), Positives = 63/218 (28%), Gaps = 64/218 (29%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ V +TG SSGIG A L + GA + AR L ++ Q +
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLF-AS 64
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DV R +A + GC IL+NNAG+ + + + + E
Sbjct: 65 VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEA-------------- 110
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ + +L FSV
Sbjct: 111 ---------------WSEEL---------------------------------QLKFFSV 122
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ R +R +V +S+ P+ +
Sbjct: 123 IHPVRAFLPQLESR-ADAAIVCVNSLLASQPEPHMVAT 159
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 94.1 bits (235), Expect = 3e-23
Identities = 40/219 (18%), Positives = 66/219 (30%), Gaps = 70/219 (31%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
K ITG++ GIG A A + GA + ++ + + A A
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYA------- 58
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
+ +DVT+ A ++ G LDIL+NNA A +I E
Sbjct: 59 VQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES------------- 105
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
++ + +NV
Sbjct: 106 ----------------YEKLF---------------------------------AINVAG 116
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
L + A +A+ +GG ++ +S AG G Y
Sbjct: 117 TLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIY 155
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 94.2 bits (235), Expect = 4e-23
Identities = 44/219 (20%), Positives = 80/219 (36%), Gaps = 52/219 (23%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+V +ITGA+ G G A A++++ GA ++ ++ + +
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAV-----------DIAGKLPSCVPYDPAS 57
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+++T L+ A R I
Sbjct: 58 PDDLSETVR-----------------LVEAANRR------------------------IV 76
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+D R+ D + G LDI++ NAG + AW+DI E R++ ++NV
Sbjct: 77 AAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGT 136
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + +GG +++ SS AG+ P+ YT
Sbjct: 137 WNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYT 175
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 94.1 bits (235), Expect = 4e-23
Identities = 46/220 (20%), Positives = 71/220 (32%), Gaps = 66/220 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
K+ +TGASSGIG A AL ++ GAK+V++AR+ + L + + G L
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG---EAAAL 62
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DV H + +++FG LD NNAG I
Sbjct: 63 AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMG-------------------EIS 103
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+L+++ + + + N+ S
Sbjct: 104 SLSVEG---------WRETL---------------------------------DTNLTSA 121
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAPYSGSYT 262
++ A GG L TSS G G Y
Sbjct: 122 FLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAGFAGVAPYA 160
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 93.7 bits (234), Expect = 4e-23
Identities = 44/220 (20%), Positives = 76/220 (34%), Gaps = 66/220 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYT 102
KVV ITG+S+G+G+++A++ + AK+V++ RS V + G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAIA 61
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
+ DVT + I++FG LD++INNAG + ++ L
Sbjct: 62 VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD------------- 108
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
++ VI + N+
Sbjct: 109 ----------------WNKVI---------------------------------DTNLTG 119
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
SR A YF+ + G ++ SS+ + P Y
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA 159
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 93.7 bits (234), Expect = 5e-23
Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 65/223 (29%)
Query: 39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
+R NKV +T ++ GIG A+A +L++ GA +V+S+R N++R G
Sbjct: 7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--- 63
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
S+ V + + R + G +DIL++NA +
Sbjct: 64 SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAA-------------------VNPF 104
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
+I T +V +D ++ +N
Sbjct: 105 FGNIIDATEEV---------WDKILH--------VN------------------------ 123
Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
V + + +++ R GG +++ SS+ P G Y
Sbjct: 124 -VKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPFPNLGPY 164
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 94.5 bits (235), Expect = 1e-22
Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 59/216 (27%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
V+ITGAS GIG+A+AL+ +K GA +V++A+++ ++ +IYT
Sbjct: 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL----------LGTIYT- 91
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
++ I G +A
Sbjct: 92 ----------------AAEE-------IEAVGG--KA----------------------L 104
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+DV + + I++FG +DIL+NNA D + + +N
Sbjct: 105 PCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGT 164
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG 259
S+ Y + H++ S + +
Sbjct: 165 YLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQ 199
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 92.6 bits (231), Expect = 1e-22
Identities = 40/218 (18%), Positives = 67/218 (30%), Gaps = 67/218 (30%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIYTL 103
+KV +TG + GIG ++ +L+ G + ++ + L A +
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ---KAVFV 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
LDVT D ++ G D+L+NNAG +Q ++ E
Sbjct: 59 GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEED-------------- 104
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ +NVFSV
Sbjct: 105 ---------------LKQIYS---------------------------------VNVFSV 116
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ A+ F G ++ +SIA I G P +Y
Sbjct: 117 FFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAY 154
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 92.7 bits (231), Expect = 1e-22
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+ ++ITGA+SG GEA A + ++ G LVL+ R ER++ L + A + + LTL
Sbjct: 21 SSTLFITGATSGFGEACARRFAEAGWSLVLTGR---REERLQALAGELSAKTR-VLPLTL 76
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV D + ++F L LINNAG
Sbjct: 77 DVRDRAAMSAAVDNLPEEFATLRGLINNAG 106
Score = 68.0 bits (167), Expect = 1e-13
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 15/109 (13%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDREL 215
+ LTLDV D + ++F L LINNAG +Q +D + +
Sbjct: 71 VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWD-----TM 125
Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
+ N+ +L +R+ +A G +V S+AG Y G+
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT 174
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 92.6 bits (231), Expect = 1e-22
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
N KVV ITG SSG+G+ +A + +K GA++V++ R+ LE K Q I
Sbjct: 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG---QIL 58
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
T+ +DV T ++ + + ++FG +DILINNA + ED+ +
Sbjct: 59 TVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVN 105
Score = 56.7 bits (138), Expect = 9e-10
Identities = 19/99 (19%), Positives = 42/99 (42%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
T+ +DV T ++ + + ++FG +DILINNA + ED+ + + + +
Sbjct: 58 LTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNG 117
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
S+ Y++ + G+++ + P
Sbjct: 118 TFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHS 156
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 92.3 bits (230), Expect = 1e-22
Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
NK V A GIG + +L K K + N + L +A +I
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL--KAINPKVNITFH 60
Query: 104 TLDVTQ-TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
T DVT ++ + Q +DILIN AG E
Sbjct: 61 TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERT 103
Score = 63.8 bits (156), Expect = 3e-12
Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 11/104 (10%)
Query: 162 IYTLTLDVTQ-TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
I T DVT ++ + Q +DILIN AG E +N
Sbjct: 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERT--------IAINF 108
Query: 221 FSVLSLSRIATSYFLAREQGGHLVV--TSSIAGIVGAPYSGSYT 262
+++ + ++ R+ G ++ S+ G Y+
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 92.3 bits (230), Expect = 2e-22
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVL--SARSSSNLERVKNLCVQAGAHPQSIYTLT 104
KV+ +TG S GIG+++ L V+ ARS + L+++K + + +
Sbjct: 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE------KYGDRFFYVV 56
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
D+T+ ++ +A ++ G +D L+ NAG
Sbjct: 57 GDITEDSVLKQLVNAAVKGHGKIDSLVANAG 87
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 92.7 bits (231), Expect = 2e-22
Identities = 40/220 (18%), Positives = 66/220 (30%), Gaps = 67/220 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+V ITG +SG+G AL + GA++ + + + ER++ L V G + +
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDK---SAERLRELEVAHGG---NAVGV 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPSI 162
DV + +R + + FG +D LI NAG + D+ +
Sbjct: 57 VGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAA--------- 107
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
FD + +NV
Sbjct: 108 ----------------FDDIF---------------------------------HVNVKG 118
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + G +V T S AG YT
Sbjct: 119 YIHAVKACLPAL--VSSRGSVVFTISNAGFYPNGGGPLYT 156
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 92.3 bits (230), Expect = 2e-22
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
K+V ITGASSGIGEA+A + S+ G L+L AR L+ + + +
Sbjct: 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL---------PNTLCAQV 66
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
DVT + +G D ++NNAG + E
Sbjct: 67 DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN 109
Score = 66.1 bits (162), Expect = 5e-13
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
+DVT + +G D ++NNAG + E + +F++NV
Sbjct: 61 TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
+L+ + + AR G ++ SSIAG A Y G+
Sbjct: 121 GLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTFPDHAAYCGT 162
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 91.9 bits (229), Expect = 2e-22
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
FN KV +TGA IG A AL+L++ G + L + LE+ + + G +
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARSY 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DVT + D+V++ FG +D L NNAG
Sbjct: 62 VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG 93
Score = 60.3 bits (147), Expect = 5e-11
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFELNVFSV 223
DVT + D+V++ FG +D L NNAG A +D + + +NV
Sbjct: 61 YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + + + + G +V T+S+AG+ G P +Y
Sbjct: 121 FHVLKAVSRQMITQ-NYGRIVNTASMAGVKGPPNMAAYG 158
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 92.1 bits (229), Expect = 5e-22
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
+ + S+ TL LDV +K + V + G +D+L+ NAG
Sbjct: 40 KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLG 97
Query: 203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
E + + + ++NV + + + + +G G ++VT S+ G++G P++ Y
Sbjct: 98 PLEALGEDAVASVLDVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVY 155
Query: 262 T 262
Sbjct: 156 C 156
Score = 90.9 bits (226), Expect = 2e-21
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 47 KVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
VV ITG SSGIG LA++L+ K+ + R R+ P S+ TL
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
LDV +K + V + G +D+L+ NAG E + + +
Sbjct: 63 QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVL 111
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 90.8 bits (226), Expect = 7e-22
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+++V +TGA+SGIG +A +L K G ++ + AR L +AG
Sbjct: 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV---EADGR 76
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
T DV AV++++G +D+L+NNAGR
Sbjct: 77 TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP 110
Score = 51.5 bits (124), Expect = 6e-08
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 21/109 (19%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--------RAAWEDIELEVDRELF 216
T DV AV++++G +D+L+NNAGR W D+ +E
Sbjct: 76 RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDV-VET----- 129
Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
N+ V +++ E+G G +V +S G G APYS S
Sbjct: 130 --NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 176
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 91.1 bits (227), Expect = 7e-22
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 41 LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
L+ F+ K+ +TGAS GIG A+A +K GA +V + + ++R AG
Sbjct: 27 LDQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG---I 83
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+ + DVT + + + G +DIL+NNAG +R ++
Sbjct: 84 NAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAA 133
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 91.1 bits (227), Expect = 7e-22
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 30 YLFFIEKINKRLNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK 87
++ + + K Y+ NKV +TGA GIG +A L+K + ++ +R+ + + V
Sbjct: 26 FMNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV 85
Query: 88 NLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ G DV++ + + ++ + +DIL+NNAG
Sbjct: 86 DEIKSFGY---ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAG 130
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 89.9 bits (224), Expect = 1e-21
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
N KV +TGAS GIG +A L+ GA +V +A S ++ E+ +N + G L
Sbjct: 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF---KARGL 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
L+++ + + F + + +DIL+NNAG
Sbjct: 60 VLNISDIESIQNFFAEIKAENLAIDILVNNAG 91
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 90.3 bits (225), Expect = 1e-21
Identities = 40/220 (18%), Positives = 69/220 (31%), Gaps = 67/220 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+TG S GIG A+ +L+ GA++ +R+ L+ + + G ++
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL---NVEGS 75
Query: 104 TLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
D+ + V F G L+IL+NNAG +D +
Sbjct: 76 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKD------------- 122
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
++ ++ N +
Sbjct: 123 ----------------YNIIM---------------------------------GTNFEA 133
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
LS+IA A Q G+++ SSIAG P Y+
Sbjct: 134 AYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSALPSVSLYS 172
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 89.5 bits (223), Expect = 1e-21
Identities = 47/223 (21%), Positives = 72/223 (32%), Gaps = 72/223 (32%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV ITGA SG GE +A + +K GAK+V+ R + ERV AG + +
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV------AGEIGDAALAV 60
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFTYAYRPSI 162
D+++ +A + +FG +DIL+NNAG + E +E E
Sbjct: 61 AADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEE------------- 107
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
FD ++ +NV
Sbjct: 108 ----------------FDRIV---------------------------------GVNVRG 118
Query: 223 VLSLSRIATSYFLAREQGGHLVV---TSSIAGIVGAPYSGSYT 262
V ++ +F G V +S P Y
Sbjct: 119 VYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN 161
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 89.5 bits (223), Expect = 2e-21
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+N+V +TG + IG A L++ GA+++++ + + G + ++
Sbjct: 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH---DVSSV 67
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+DVT T+ + +V +Q G +DIL+ AG
Sbjct: 68 VMDVTNTESVQNAVRSVHEQEGRVDILVACAG 99
Score = 59.1 bits (144), Expect = 1e-10
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSV 223
+ +DVT T+ + +V +Q G +DIL+ AG ED+ + ++N+ +
Sbjct: 67 VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGM 126
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVG------APYSGS 260
+ L + + G +V S++G++ A Y+ S
Sbjct: 127 FRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIVNRPQQQAAYNAS 168
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 89.7 bits (223), Expect = 2e-21
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCG---AKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
K V ITGAS+GIG+A AL+ + KL+L+AR LE +K Q + + ++
Sbjct: 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK-VH 90
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
LD+TQ + + + + Q+F +DIL+NNAG
Sbjct: 91 VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG 124
Score = 63.1 bits (154), Expect = 7e-12
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQR 201
E+ + + ++ LD+TQ + + + + Q+F +DIL+NNAG R +
Sbjct: 75 ELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQ 134
Query: 202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
A EDI+ ++F+ NV +++++++ F A+ G +V SIAG P Y
Sbjct: 135 IATEDIQ-----DVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAYPTGSIY 188
Query: 262 T 262
Sbjct: 189 C 189
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 90.0 bits (224), Expect = 2e-21
Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 66/224 (29%)
Query: 40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQ 98
N F KV +ITG +G+G+ + LS GA+ V+++R L+ + + Q G
Sbjct: 20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--- 76
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
++ + DV + +I+ G +I+INNA + + E +
Sbjct: 77 KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNA--------- 127
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
+ + ++
Sbjct: 128 --------------------WKTIT---------------------------------DI 134
Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ ++ + ++G + ++I G+ +
Sbjct: 135 VLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 88.4 bits (220), Expect = 2e-21
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
++ ITGASSG+G LA G L+ RS S L V ++ D
Sbjct: 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV------TNCLSNNVGYRARD 55
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+ + + F+ + ++++AG ++ + E
Sbjct: 56 LASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPE 94
Score = 71.1 bits (175), Expect = 6e-15
Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
D+ + + F+ + ++++AG ++ + E + L E N+ S
Sbjct: 51 YRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSA 107
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+++ R + ++Q ++V+ S A +Y
Sbjct: 108 INVLRELVKRY--KDQPVNVVMIMSTAAQQPKAQESTY 143
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 89.7 bits (223), Expect = 3e-21
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
+ L+ F+ + +TG +SGIG A A + ++ GA+LVLS LE+ N G
Sbjct: 23 DGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-- 80
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+ + DV R D + G +D++ +NAG + +
Sbjct: 81 -DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD 130
Score = 77.0 bits (190), Expect = 1e-16
Identities = 21/99 (21%), Positives = 41/99 (41%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ DV R D + G +D++ +NAG + + R + +++++
Sbjct: 84 GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGS 143
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ L + GGH+ T+S AG+V G+Y
Sbjct: 144 IHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYG 182
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 89.2 bits (222), Expect = 3e-21
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
KV +TG+S GIG A+A ++ GA + + S E+ ++L G H
Sbjct: 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---SKAYK 89
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELE 148
+++ K + FG +D+ + NAG +Q + +
Sbjct: 90 CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYD 135
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 89.2 bits (222), Expect = 3e-21
Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 52/219 (23%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+V +ITGA+ G G + A++L+ GA ++ ++C A
Sbjct: 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIAC-----------DICAPVSASVTYAPAS 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+ +T L+ + GR
Sbjct: 62 PEDLDETAR-----------------LVEDQGRK------------------------AL 80
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
T LDV R ++QFG LD+++ NAG ++ E + +N+
Sbjct: 81 TRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGT 140
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
R + GG +VV SS AG+ P +G Y+
Sbjct: 141 WRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYS 179
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 88.7 bits (221), Expect = 3e-21
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
N+ V +TGA++GIG A+A +K GA +V++ S E V QAG L
Sbjct: 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG---KAIGL 66
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+VT ++ A + QFG + +L+NNAG
Sbjct: 67 ECNVTDEQHREAVIKAALDQFGKITVLVNNAG 98
Score = 59.8 bits (146), Expect = 7e-11
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-------RSQRAAWEDIELEVDRELFE 217
L +VT ++ A + QFG + +L+NNAG + +E F+
Sbjct: 66 LECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWA--------FK 117
Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
LN+FS+ LS++A + GG ++ SS+AG SY
Sbjct: 118 LNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTNVRMASY 160
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 88.3 bits (220), Expect = 4e-21
Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 64/218 (29%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F NKV +TG+ GIG+A A L++ GA +V++ ++ E V V G + ++
Sbjct: 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG---TAISV 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+DV+ + + D + +FG +D L+NNA I+
Sbjct: 64 AVDVSDPESAKAMADRTLAEFGGIDYLVNNAA--------------------------IF 97
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ + +N+
Sbjct: 98 GGMKLDFLLTIDPEYYKKFM---------------------------------SVNLDGA 124
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVG-APYSGS 260
L +R R GG +V SS A + Y +
Sbjct: 125 LWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYSNYYGLA 161
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 88.4 bits (220), Expect = 4e-21
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYT 102
K V ITG+S GIG A A ++ GAK+ L R + N++ G
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG---DAAF 61
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR 139
D+ ++ ++ D + +FG +D+LINNAG
Sbjct: 62 FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVG 98
Score = 59.9 bits (146), Expect = 6e-11
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-AAWEDIELEVDRELFELNVFS 222
D+ ++ ++ D + +FG +D+LINNAG +I+ + + N+ S
Sbjct: 61 FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120
Query: 223 VLSLSRIATSYFLAR----EQGGHLVVTSSIAGIVG-----APYSGS 260
V+ ++ A + A Q ++ T SIAG G Y +
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAA 167
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 88.4 bits (220), Expect = 5e-21
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
N KV +TGA+ GIG A A L GAK+ L + + K + ++++ +
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF-I 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
DV + R F V+ FG LDIL+NNAG + WE
Sbjct: 64 QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKT 105
Score = 61.5 bits (150), Expect = 2e-11
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
DV + R F V+ FG LDIL+NNAG + WE ++N+ SV+S +
Sbjct: 66 DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKT--------LQINLVSVISGT 117
Query: 228 RIATSYFLAREQGGHLVV--TSSIAGIVGAPYSGSYT 262
+ Y + G ++ SS+AG++ Y
Sbjct: 118 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC 154
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 88.3 bits (220), Expect = 5e-21
Identities = 38/219 (17%), Positives = 67/219 (30%), Gaps = 67/219 (30%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+TG S GIG + +L+ GA + +R+ L G +
Sbjct: 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF---KVEASV 64
Query: 105 LDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D++ + + V F G L+IL+NNAG +D +E
Sbjct: 65 CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-------------- 110
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ ++ +N +
Sbjct: 111 ---------------YSLIMS---------------------------------INFEAA 122
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
LS +A + A + G++V SS++G + PY Y
Sbjct: 123 YHLSVLAHPFLKAS-ERGNVVFISSVSGALAVPYEAVYG 160
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 88.3 bits (220), Expect = 5e-21
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 41 LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHP 97
F+ +V +TG S G+G +A L++ G +V+++R+ + L + G
Sbjct: 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE- 72
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
DV+ + ++ +AV ++FG LD ++N AG ++R E+ L+
Sbjct: 73 --TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD 121
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 88.4 bits (220), Expect = 6e-21
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ +V +TGAS GIG A+AL+L++ GA ++ +A + + E + QAG
Sbjct: 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL---EGRGA 82
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
L+V ++ +++FG L++L+NNAG
Sbjct: 83 VLNVNDATAVDALVESTLKEFGALNVLVNNAG 114
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 87.5 bits (218), Expect = 6e-21
Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 68/220 (30%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
++V +TGASSG G A+A + G ++ S+ LE A A + +
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYAD--KVLRVRA 59
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG---RSQRAAWEDIELEVDRELFTYAYRPSI 162
DV A ++QFG +D+L+NNAG S+ +E
Sbjct: 60 DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQ------------- 106
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
FD V+ +NV
Sbjct: 107 ----------------FDKVM---------------------------------AVNVRG 117
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ R + L + G +V +S+A +V P +YT
Sbjct: 118 IFLGCRAVLPHMLLQ-GAGVIVNIASVASLVAFPGRSAYT 156
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 87.2 bits (217), Expect = 8e-21
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
+V +TGA++G GE + + + G K++ + R ER++ L + G ++Y LDV
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGR---RQERLQELKDELGD---NLYIAQLDV 55
Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVD 150
++ ++ +DIL+NNAG + +A+ ED E +D
Sbjct: 56 RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMID 104
Score = 61.8 bits (151), Expect = 2e-11
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDREL 215
+Y LDV ++ ++ +DIL+NNAG + +A+ ED E +
Sbjct: 48 LYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWE-----TM 102
Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ N ++ ++R + R GH++ S AG Y
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYAGGNVYG 148
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 88.4 bits (220), Expect = 9e-21
Identities = 44/232 (18%), Positives = 76/232 (32%), Gaps = 78/232 (33%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
KV +ITGA+ G G + A+ L++ GA ++ + +L
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 92 QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVD 150
G I +DV + D + Q G LDI++ NA S+ ++ +
Sbjct: 86 ALGR---RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT- 141
Query: 151 RELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 210
+ +I D+
Sbjct: 142 ----------------------------WRDMI------DV------------------- 148
Query: 211 VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
N+ +R+A + +A ++GG +V TSSI G+ GA G+Y
Sbjct: 149 --------NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYI 192
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 87.6 bits (218), Expect = 9e-21
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
KVV ITGAS GIG L ++V ++RS V
Sbjct: 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAG---------- 75
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
D+++ + R I++FG +D L+NNAG
Sbjct: 76 --DISKPETADRIVREGIERFGRIDSLVNNAG 105
Score = 54.1 bits (131), Expect = 6e-09
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
T+ D+++ + R I++FG +D L+NNAG + ++ E +NV
Sbjct: 72 TVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGF 131
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+++ A + L + GH+V ++ S
Sbjct: 132 FHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVGMPSA 168
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 87.2 bits (217), Expect = 1e-20
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ KV ITG+SSGIG A+A +K GA +VL AR L + + +
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEV 62
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+DV + ++V FG DIL+NNAG + E
Sbjct: 63 AVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADE 107
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 87.2 bits (217), Expect = 1e-20
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
N K+ ITGA+SGIG A A + GA++ ++ R L+ + G +
Sbjct: 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGG---GAVGI 80
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D R ++ V + G +D+L NAG ++ E
Sbjct: 81 QADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEE 125
Score = 71.0 bits (175), Expect = 1e-14
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
D R ++ V + G +D+L NAG ++ E + F+ NV VL
Sbjct: 83 DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ A +G +V+T S AG G P Y
Sbjct: 143 QKALPLL---ARGSSVVLTGSTAGSTGTPAFSVYA 174
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 87.0 bits (216), Expect = 2e-20
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
V +TGAS G G ALA QL++ G+ +++SARS S L ++K A +
Sbjct: 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL-GAQQPDLKV 62
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGC----LDILINNAG 135
D+ +R AV + +LINNA
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAA 101
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 87.3 bits (217), Expect = 2e-20
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+ ++TG SSGIG A+A L+ G + AR + N+ + AG + +
Sbjct: 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH---DVDGSS 79
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
DVT T A +++FG + IL+N+AGR+
Sbjct: 80 CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN 112
Score = 50.7 bits (122), Expect = 1e-07
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
+ DVT T A +++FG + IL+N+AGR+ D++ + ++ + N+ V
Sbjct: 78 SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVF 137
Query: 225 SLSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
++R RE G G +V +S G G APY+ S
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS 178
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 86.4 bits (215), Expect = 2e-20
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 7/90 (7%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
N+ V +TG GIG+ + L + G K+
Sbjct: 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFH-------G 54
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV ++ + +++ +D+L+NNA
Sbjct: 55 DVADPLTLKKFVEYAMEKLQRIDVLVNNAC 84
Score = 52.1 bits (126), Expect = 3e-08
Identities = 17/108 (15%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
RP+++ DV ++ + +++ +D+L+NNA R + + E +
Sbjct: 44 KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYIL 103
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
+ + + LSR+ + G ++ +S Y+ +
Sbjct: 104 SVGLKAPYELSRLCRDEL--IKNKGRIINIASTRAFQSEPDSEAYASA 149
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 86.8 bits (216), Expect = 2e-20
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 72/220 (32%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ KVV +TG GIG + GA++V+ + S ++ A +
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF-------I 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPSI 162
DVTQ + I++FG LD ++NNAG E+ +
Sbjct: 60 LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG------------- 106
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
F ++ ELN+
Sbjct: 107 ----------------FRQLL---------------------------------ELNLLG 117
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+L+++A Y G+++ SS+ G +G + Y
Sbjct: 118 TYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYV 155
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 86.5 bits (215), Expect = 3e-20
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
+KV +ITG SGIG +A + G V+++RS + + L AGA +
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKL---AGATGRRCLP 81
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
L++DV D +++FG +DILIN A
Sbjct: 82 LSMDVRAPPAVMAAVDQALKEFGRIDILINCAA 114
Score = 51.9 bits (125), Expect = 4e-08
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
L++DV D +++FG +DILIN A + + + + +++
Sbjct: 81 PLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGT 140
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
++SR+ F R+ GG +V ++ G G
Sbjct: 141 FNVSRVLYEKFF-RDHGGVIVNITATLGNRGQALQVHA 177
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 86.9 bits (216), Expect = 3e-20
Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP-- 97
+V +TG ++GIG+A+ +L + G+ +V+++R L+ +
Sbjct: 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ 71
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ + ++ + + + FG ++ L+NN G
Sbjct: 72 ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG 109
Score = 47.7 bits (114), Expect = 1e-06
Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
+ + ++ + + + FG ++ L+NN G + E I + + E N+
Sbjct: 74 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133
Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ + S ++ ++ G +V + G P +
Sbjct: 134 GTFYMCKAVYSSWM--KEHGGSIVNIIVPTKAGFPLAVHS 171
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 85.6 bits (213), Expect = 3e-20
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
KV +TG++ GIG A+A +L+ G+ ++++ S + + + + G +
Sbjct: 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV---KAHG 61
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ +++ + + F+ + +DIL+NNAG
Sbjct: 62 VEMNLLSEESINKAFEEIYNLVDGIDILVNNAG 94
Score = 44.4 bits (106), Expect = 1e-05
Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRE 214
+ + +++ + + F+ + +DIL+NNAG R WE++
Sbjct: 60 HGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEV------- 112
Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
++N+ +++ + + +++ G +V SS+ G G YS +
Sbjct: 113 -LKVNLTGTFLVTQNSLRKMI-KQRWGRIVNISSVVGFTGNVGQVNYSTT 160
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 85.3 bits (212), Expect = 6e-20
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ V +TG + GIG +A ++ GA + ++ RS+++++ Q G+ + +
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--GKVIGV 65
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV+ +++FG +D++ NAG
Sbjct: 66 QTDVSDRAQCDALAGRAVEEFGGIDVVCANAG 97
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 85.3 bits (212), Expect = 6e-20
Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 67/219 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
NK +TG+S G+G+A A++L++ G +V++ ARS + G +
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLV 58
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
+ +V Q + F + + FG LD+ +NNA ++E
Sbjct: 59 VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH------------- 105
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
+D + +N +
Sbjct: 106 ----------------WDWTM---------------------------------NINAKA 116
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+L ++ A + GGH+V SS+ I +
Sbjct: 117 LLFCAQEAAKLME-KNGGGHIVSISSLGSIRYLENYTTV 154
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 86.2 bits (214), Expect = 6e-20
Identities = 42/231 (18%), Positives = 69/231 (29%), Gaps = 77/231 (33%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
KV +ITGA+ G G A++L++ GA +V + S L+ L
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 92 QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
+ G I DV + D + +FG +DIL++N G S + + +
Sbjct: 104 EQGR---RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQ-- 158
Query: 152 ELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 211
+ ++
Sbjct: 159 ---------------------------WSDIL------QT-------------------- 165
Query: 212 DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
N+ R + R QGG ++ SS G+ GAP Y
Sbjct: 166 -------NLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYA 209
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 85.3 bits (212), Expect = 6e-20
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ +TGA+ GIGEA+A GA + L L+ + G ++
Sbjct: 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA---DLGK---DVFVF 78
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ +++ K ++ + ++ +DIL+NNAG
Sbjct: 79 SANLSDRKSIKQLAEVAEREMEGIDILVNNAG 110
Score = 44.5 bits (106), Expect = 1e-05
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDR 213
++ + +++ K ++ + ++ +DIL+NNAG R Q W+D+
Sbjct: 75 VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDV------ 128
Query: 214 ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
+N+ + +L+R + R + G ++ +SI G+VG P Y +
Sbjct: 129 --LAVNLTAASTLTRELIHSMM-RRRYGRIINITSIVGVVGNPGQTNYCAA 176
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 85.7 bits (213), Expect = 7e-20
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ + V +TG + GIG +A ++ GA + ++ARS L V + GA ++ +
Sbjct: 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG--NVIGV 96
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
LDV+ V+ FG LD++ NAG
Sbjct: 97 RLDVSDPGSCADAARTVVDAFGALDVVCANAG 128
Score = 46.5 bits (111), Expect = 3e-06
Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 17/97 (17%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
+ LDV+ V+ FG LD++ NAG ++
Sbjct: 96 VRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEV--------L 147
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV 253
++NV + + + G +++TSSI G V
Sbjct: 148 DVNVKGTVYTVQACLAPLT-ASGRGRVILTSSITGPV 183
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 84.9 bits (211), Expect = 1e-19
Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 69/219 (31%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
N +V +TG SGIG A A +K GA +V++ + RV A + +
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV------ANEIGSKAFGV 78
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+DV+ K + ++G +D+L+NNAG I E
Sbjct: 79 RVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET-------------- 124
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+D ++ +NV +
Sbjct: 125 ---------------WDRIM---------------------------------SVNVKGI 136
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
S+ GG ++ T+S +Y
Sbjct: 137 FLCSKYVIPVMRRN-GGGSIINTTSYTATSAIADRTAYV 174
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 84.1 bits (209), Expect = 2e-19
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 41 LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
F +TGA SGIG + + GA+L+L R ++ L+R A A
Sbjct: 4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAAR- 62
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+ DVT + + + IL+N+AG ++ + +
Sbjct: 63 ----IVADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDA 107
Score = 59.1 bits (144), Expect = 1e-10
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
+ DVT + + + IL+N+AG ++ + + R++ +NV
Sbjct: 61 ARIVADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDG 119
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVG------APYSGS 260
+ SR +AR G +V S++G + + Y S
Sbjct: 120 MFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQFASSYMAS 162
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 84.6 bits (210), Expect = 2e-19
Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 82/236 (34%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL----------------SARSSSNLERVK 87
KV ++TGA+ G G + A++L++ GA ++ A + +L
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 88 NLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIE 146
+L I T +DV + D+ ++Q G LDI++ NAG + +
Sbjct: 69 DLVKGHNR---RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTS 125
Query: 147 LEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 206
E + +I DI
Sbjct: 126 EED-----------------------------WTEMI------DI--------------- 135
Query: 207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
N+ V + + +A +GG +++TSS+ G+ P++G Y
Sbjct: 136 ------------NLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYV 179
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 84.1 bits (209), Expect = 2e-19
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
K +TG+S G+G+A+A +L GA +VL+ + +S++L+ AG ++
Sbjct: 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI---NVVV 59
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV + + FG +DIL+NNAG
Sbjct: 60 AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAG 92
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 84.1 bits (209), Expect = 2e-19
Identities = 43/219 (19%), Positives = 65/219 (29%), Gaps = 67/219 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
NKV ITGA GIG + L++ GA++VL+ + G
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADL---PETDLAGAAASVGR---GAVHH 62
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+D+T R D I FG LDI+ NNA D +
Sbjct: 63 VVDLTNEVSVRALIDFTIDTFGRLDIVDNNAA---------HSDPAD---------MLVT 104
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+T+DV +D +N
Sbjct: 105 QMTVDV---------WDDTF---------------------------------TVNARGT 122
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + + A ++ GG +V SS S +Y
Sbjct: 123 MLMCKYAIPRLISA-GGGAIVNISSATAHAAYDMSTAYA 160
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 83.7 bits (208), Expect = 2e-19
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
KV +TGAS GIG+A+A L++ GAK++ +A S S + + L
Sbjct: 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------- 59
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ L+VT + A+ +FG +DIL+NNAG
Sbjct: 60 MALNVTNPESIEAVLKAITDEFGGVDILVNNAG 92
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 83.7 bits (208), Expect = 2e-19
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
+ RL+ KV ITG + GIG A+A + + GAK++++ R S E+ G
Sbjct: 1 SNRLD---GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK---SVGTPD 54
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
Q + D + + FDA + FG + L+NNAG + + E+
Sbjct: 55 QIQF-FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTA 104
Score = 71.8 bits (177), Expect = 5e-15
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
D + + FDA + FG + L+NNAG + + E+ R+L +N+ V
Sbjct: 61 HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+R+ + G ++ SSI G VG P G+Y
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN 156
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 83.8 bits (208), Expect = 2e-19
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
K+ +TGA+ G+G + LS+ + R+ E + L G P +
Sbjct: 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP---EHLAALAEIEGVEP-----IE 54
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
D+ + D + + +D L++ A
Sbjct: 55 SDIVKEVLEEGGVDKL-KNLDHVDTLVHAAA 84
Score = 66.8 bits (164), Expect = 2e-13
Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
A + + D+ + D + + +D L++ A ++ E +
Sbjct: 45 AEIEGVEPIESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHL 103
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+LNV LSR A G ++ +S AG P + Y
Sbjct: 104 DLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHPGNTIY 146
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 83.8 bits (208), Expect = 2e-19
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI--- 100
+ + +TGA SGIG A++++L+ GA + + + L G+
Sbjct: 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 101 -YTLTLDVTQTKYHRRCFDAVIQQFG-CLDILINNAG 135
DV++ + R + V F ++++ AG
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG 101
Score = 44.9 bits (107), Expect = 8e-06
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 17/130 (13%)
Query: 134 AGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG-CLDIL 192
+ AA E + L R + DV++ + R + V F ++
Sbjct: 37 CDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVV 96
Query: 193 INNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLV 244
++ AG W+ + + V N+ +++ A ++ G ++
Sbjct: 97 VSCAGITQDEFLLHMSEDDWDKV-IAV-------NLKGTFLVTQAAAQALVSNGCRGSII 148
Query: 245 VTSSIAGIVG 254
SSI G VG
Sbjct: 149 NISSIVGKVG 158
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 83.7 bits (208), Expect = 2e-19
Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 71/218 (32%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ K + G + G+G A +L + GA+++L+ R+ SN+ R+ ++ L
Sbjct: 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI------REEFGPRVHAL 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+ A Q G +D+L NAG S+ ++ +
Sbjct: 60 RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS-------------- 105
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+D +N
Sbjct: 106 ---------------YDRQF---------------------------------AVNTKGA 117
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ T +GG +V TSS+A G P Y
Sbjct: 118 FFTVQRLTPLI---REGGSIVFTSSVADEGGHPGMSVY 152
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 83.8 bits (208), Expect = 2e-19
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 9/89 (10%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
+T G AL+LS+ G + S + ++ L
Sbjct: 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ---------LK 52
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ +AV +G +D+L++N
Sbjct: 53 PMSEQEPAELIEAVTSAYGQVDVLVSNDI 81
Score = 49.1 bits (118), Expect = 3e-07
Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 18/105 (17%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA---------WEDIELEVDRELFE 217
L + +AV +G +D+L++N + + E
Sbjct: 51 LKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA--------VE 102
Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+L S R + GH++ +S +YT
Sbjct: 103 ALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPWKELSTYT 146
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 83.7 bits (208), Expect = 2e-19
Identities = 35/219 (15%), Positives = 66/219 (30%), Gaps = 72/219 (32%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F K V +TG + GIG A+A ++ GA + L E + +
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF---------F 54
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+D+ + R + G +D+L+NNA + + + L
Sbjct: 55 QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE-------------- 100
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ V+ E+N+ +
Sbjct: 101 ---------------WRRVL---------------------------------EVNLTAP 112
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ LS +A GG +V +S+ G+ + +Y
Sbjct: 113 MHLSALAAREMRKV-GGGAIVNVASVQGLFAEQENAAYN 150
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 83.3 bits (207), Expect = 3e-19
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
KV +TGAS GIG A+A+ L+K GA +V++ A + V + + G+
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS---DAIA 58
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ DV + + FG +DIL+NNAG
Sbjct: 59 VRADVANAEDVTNMVKQTVDVFGQVDILVNNAG 91
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 83.3 bits (207), Expect = 3e-19
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
F N+ + + GA IG A A++ ++ GA +VL+ ++ + G
Sbjct: 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS---ALA 62
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ D+T A +FG + L++ AG
Sbjct: 63 IKADLTNAAEVEAAISAAADKFGEIHGLVHVAG 95
Score = 62.2 bits (152), Expect = 1e-11
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGR-SQRAAWEDIELEVDRELFELNVFSVLSL 226
D+T A +FG + L++ AG R +++ ++ ++N+ S+
Sbjct: 66 DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAP-----YSGS 260
++ A +GG +V SS AG G Y+ S
Sbjct: 126 AKTALPKMA---KGGAIVTFSSQAGRDGGGPGALAYATS 161
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 83.4 bits (207), Expect = 3e-19
Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 77/219 (35%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+KVV +TGAS GIG A+A + G+K++ + + +
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD--------------HI 51
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DVT + D + +++G + +L+NNAG E + +
Sbjct: 52 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGE-------------- 97
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ +I ++N+F
Sbjct: 98 ---------------WRRII---------------------------------DVNLFGY 109
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
S+ A Y + + +V SS+ + + +Y
Sbjct: 110 YYASKFAIPYMIRS-RDPSIVNISSVQASIITKNASAYV 147
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 83.4 bits (207), Expect = 3e-19
Identities = 40/219 (18%), Positives = 64/219 (29%), Gaps = 77/219 (35%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F KV +TGA+ GIG A+ L GA++ ++ R+ + + L +
Sbjct: 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD--LHLPG---------- 73
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
D+ + Y AV G LDI++NNAG R +
Sbjct: 74 --DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDAD-------------- 117
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ + +NV +
Sbjct: 118 ---------------WSLSL---------------------------------GVNVEAP 129
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ R A A GG +V +S G+ P Y
Sbjct: 130 FRICRAAIPLMAAA-GGGAIVNVASCWGLRPGPGHALYC 167
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 83.0 bits (206), Expect = 4e-19
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ ++ ++TG GIG ++ +L K G ++V +S R A Y
Sbjct: 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS--PRRVKWLEDQKALGFDFYAS 68
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+V ++ FD V + G +D+L+NNAG
Sbjct: 69 EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG 100
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 83.4 bits (207), Expect = 4e-19
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+V ++TG G+G A++ +L G + +S + + V + +
Sbjct: 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERDAGRDFKAYA 81
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+DV + RC + V+ FG +D+LINNAG
Sbjct: 82 VDVADFESCERCAEKVLADFGKVDVLINNAG 112
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 83.0 bits (206), Expect = 4e-19
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
+ K + +TGA+SGIG A ++ GA LV R L V L +A A
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIA------- 56
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ DV+ K F +++FG L + + AG
Sbjct: 57 VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAG 89
Score = 43.3 bits (103), Expect = 3e-05
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
+ DV+ K F +++FG L + + AG AWE + L V
Sbjct: 57 VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKV-LRV----- 110
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI--VG-APYSGS 260
N+ ++R A L GG LV+T S+AG+ G A Y+
Sbjct: 111 --NLTGSFLVARKAGEV-LEE--GGSLVLTGSVAGLGAFGLAHYAAG 152
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 82.9 bits (206), Expect = 4e-19
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
K V +TG + GIG A+ + + GA + AR+ L + + G +
Sbjct: 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSV 69
Query: 105 LDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIELE 148
D + + V FG LDILINN G + D E
Sbjct: 70 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE 114
Score = 56.0 bits (136), Expect = 2e-09
Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
D + + V FG LDILINN G + D E N+
Sbjct: 66 TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125
Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
S LS++A A G+++ SSIAG+V A Y+
Sbjct: 126 SAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSASVGSIYS 165
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 83.0 bits (206), Expect = 4e-19
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 44 FNNKVVWITGAS-SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
KVV +T A+ +GIG A + GA +V+S L ++ G +
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEA 77
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ DVT T+ +++ G LD+L+NNAG
Sbjct: 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG 110
Score = 58.7 bits (143), Expect = 2e-10
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
+ DVT T+ +++ G LD+L+NNAG + D+ E + + + SV+
Sbjct: 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+R A YF + GG +V +S+ G Y
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 82.9 bits (206), Expect = 5e-19
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV ++G + G+G + + GAK+V E K + + + Y +
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---LDEEGKAMAAELA--DAARY-V 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
LDVTQ + D + FG L +L+NNAG ED L
Sbjct: 59 HLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 103
Score = 65.2 bits (160), Expect = 9e-13
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
LDVTQ + D + FG L +L+NNAG ED L + + ++N+ V
Sbjct: 60 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
R G ++ SSI G+ G YT
Sbjct: 120 IRAVVKPMKEA-GRGSIINISSIEGLAGTVACHGYT 154
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 83.1 bits (206), Expect = 5e-19
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
K ITG++SGIG A+A L+K GA +VL+ + + R V + ++
Sbjct: 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH-H 81
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+T+ V +FG DIL+NNAG ED +E
Sbjct: 82 PADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVE 126
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 82.6 bits (205), Expect = 5e-19
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
K+ +T SSG+G A AL+L++ GA+L+L +R+ LE + + + + +
Sbjct: 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASR-IASLVSGAQVDIVA 64
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+ + R F+ + G DIL+ + G + + ++ +E
Sbjct: 65 GDIREPGDIDRLFEKA-RDLGGADILVYSTGGPRPGRFMELGVE 107
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 83.0 bits (206), Expect = 5e-19
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
+++ +TGAS GIG A+AL+L+ GAK+ ++ A S+ + V AG +
Sbjct: 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG---EAFA 82
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ DV+Q F AVI+++G LD+L+NNAG
Sbjct: 83 VKADVSQESEVEALFAAVIERWGRLDVLVNNAG 115
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 83.0 bits (206), Expect = 5e-19
Identities = 45/219 (20%), Positives = 70/219 (31%), Gaps = 69/219 (31%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV +TGA +GIG A+A +L+ G ++ + + A
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA------ATKIGCGAAAC 80
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+DV+ + DA + FG +D L+ NAG A+ D +E
Sbjct: 81 RVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-------------- 126
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
FD VI I N+
Sbjct: 127 ---------------FDRVI------AI---------------------------NLRGA 138
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
++ A + R GG +V SS+AG V +G+Y
Sbjct: 139 WLCTKHAAPRMIER-GGGAIVNLSSLAGQVAVGGTGAYG 176
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 83.0 bits (206), Expect = 5e-19
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
++ +TG S GIG+ +A L + GA++ + AR + G + D
Sbjct: 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG----DCQAIPAD 85
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
++ RR A+ + LDIL+NNAG S AA E +
Sbjct: 86 LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVS 127
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 82.6 bits (205), Expect = 6e-19
Identities = 33/221 (14%), Positives = 60/221 (27%), Gaps = 71/221 (32%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVL---SARSSSNLERVKNLCVQAGAHPQSIY 101
NKV+ I G +G A + LVL A+ S ++K+ GA
Sbjct: 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY- 68
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS 161
D++ + + FD ++FG +DI IN G+ + +
Sbjct: 69 --QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE------------ 114
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
FDA+ +N
Sbjct: 115 -----------------FDAMDT---------------------------------INNK 124
Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ A + GH++ ++ + +Y
Sbjct: 125 VAYFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYSTYA 162
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 82.2 bits (204), Expect = 6e-19
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 36 KINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA 95
+ + K ITGASSGIG A+A L K G+K+++S + L+ + N A
Sbjct: 4 HHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN------A 57
Query: 96 HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ ++ + +I + LDIL+ NAG
Sbjct: 58 LKDNYTIEVCNLANKEE----CSNLISKTSNLDILVCNAG 93
Score = 41.0 bits (97), Expect = 2e-04
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 21/93 (22%)
Query: 180 DAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIAT 231
+I + LDIL+ NAG R + ++ + ++N+ + L+R A
Sbjct: 76 SNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKV--------IDINLKANFILNREAI 127
Query: 232 SYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
+ +++ G ++ SSI GI G P Y S
Sbjct: 128 KKMI-QKRYGRIINISSIVGIAGNPGQANYCAS 159
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 82.1 bits (204), Expect = 7e-19
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+ ITGAS GIG A+AL+L++ G L + ++ E V + G+ + L
Sbjct: 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS--PLVAVLGA 59
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
++ + + + G LD L+NNAG
Sbjct: 60 NLLEAEAATALVHQAAEVLGGLDTLVNNAG 89
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 82.6 bits (205), Expect = 7e-19
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
+ IT + G+G+ + +L G + ++ S + E +K +
Sbjct: 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE---RLQF 61
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
+ DVT+ + + + + FG +D LINNAG
Sbjct: 62 VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY 96
Score = 41.0 bits (97), Expect = 2e-04
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 199
+ DVT+ + + + + FG +D LINNAG
Sbjct: 60 QFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY 96
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 82.7 bits (205), Expect = 7e-19
Identities = 37/228 (16%), Positives = 66/228 (28%), Gaps = 76/228 (33%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-------VKNLCVQAG-- 94
K ++I+G S GIG A+A +++ GA + L A+S+ + +AG
Sbjct: 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 95 AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
A P + D+ ++QFG +DI +NNA A
Sbjct: 67 ALP-----IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNAS----AIN------------ 105
Query: 155 TYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRE 214
+V + FD +
Sbjct: 106 --------LGSIEEVPLKR-----FDLMNG------------------------------ 122
Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ V ++S+ + R+ L ++ I Y
Sbjct: 123 ---IQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYM 167
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 82.6 bits (205), Expect = 8e-19
Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 70/224 (31%)
Query: 41 LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
F+ + +TGA SGIG A+A ++ GA ++ R+ E +
Sbjct: 24 TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIA----DGGG 79
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
S + D+ + + + +D+L+NNAG RA E++ L
Sbjct: 80 SAEAVVADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPAEEVSLGR--------- 129
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
+ V+ +
Sbjct: 130 --------------------WREVLT---------------------------------V 136
Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
N+ + LSR + LA G +V +S+ G +Y
Sbjct: 137 NLDAAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQGGRNVAAYA 179
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 81.8 bits (203), Expect = 8e-19
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
K +TGAS GIG ++ALQL++ G + ++ A S E V G + +
Sbjct: 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV---DSFAI 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+V + V+ QFG LD+L+NNAG
Sbjct: 60 QANVADADEVKAMIKEVVSQFGSLDVLVNNAG 91
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 81.8 bits (203), Expect = 9e-19
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
N + K V ITG + G+G A Q GA++VL+ E + G + Y
Sbjct: 1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATARELGD--AARY 55
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
LDVT + +R ++FG +D L+NNAG S E +E
Sbjct: 56 -QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101
Score = 66.0 bits (162), Expect = 5e-13
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
LDVT + +R ++FG +D L+NNAG S E +E R++ E+N+ V
Sbjct: 56 QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ GG +V SS AG++G + SY
Sbjct: 116 IGMKTVIPAMKDA-GGGSIVNISSAAGLMGLALTSSYG 152
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 81.8 bits (203), Expect = 1e-18
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+K+ ITG ++GIG A+A + + GA + ++ + + G + T+
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGR---RVLTV 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV+Q VI FG DIL+NNAG
Sbjct: 60 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAG 91
Score = 57.5 bits (140), Expect = 4e-10
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
+ DV+Q VI FG DIL+NNAG ++++ E ++ FE+NV S
Sbjct: 59 VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF 118
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+++ G ++ +S + Y
Sbjct: 119 LMAKAFVPGMKRN-GWGRIINLTSTTYWLKIEAYTHY 154
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 82.2 bits (204), Expect = 1e-18
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
K +TG+++GIG+A+A L GA ++++ R N+ ++A + +
Sbjct: 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKE-IRAQYPDAILQPV 66
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+ + VI+++ +DILINN G + + DI E
Sbjct: 67 VADLGTEQ----GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDE 107
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 81.4 bits (202), Expect = 1e-18
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+K V ITGA+ GIG A +K GA+LV L GAH +
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---AVGAH-----PV 54
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+DV R F + G LD +++ AG
Sbjct: 55 VMDVADPASVERGFAEALAHLGRLDGVVHYAG 86
Score = 41.7 bits (99), Expect = 9e-05
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
+ +DV R F + G LD +++ AG + WE + L V
Sbjct: 54 VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELV-LRV----- 107
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI 252
N+ +++ A+ + G +V+T+S +
Sbjct: 108 --NLTGSFLVAKAASEAMR-EKNPGSIVLTASRVYL 140
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 81.8 bits (203), Expect = 1e-18
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F +KV +TG SSGIG A+ L + GAK+V + + V +
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------SDH-------F 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+DVT + + + +++G +DIL+NNAG Q + E
Sbjct: 59 KIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTE 103
Score = 66.4 bits (163), Expect = 4e-13
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
+DVT + + + +++G +DIL+NNAG Q + E+ R + ++NV
Sbjct: 58 FKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSY 117
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+++ LA G ++ +S+ + +Y
Sbjct: 118 LMAKYTIPVMLAI-GHGSIINIASVQSYAATKNAAAYV 154
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 81.0 bits (201), Expect = 2e-18
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
VV +TGAS GIG+A+AL L K G K++++ ARS+ E V G T
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGG 58
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV++ I +G +D+++NNAG
Sbjct: 59 DVSKEADVEAMMKTAIDAWGTIDVVVNNAG 88
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 81.1 bits (201), Expect = 2e-18
Identities = 48/220 (21%), Positives = 77/220 (35%), Gaps = 72/220 (32%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSIY 101
K +TG++SGIG +A L++ GA +VL+ L + V+A HP
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHP---- 57
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS 161
D++ F ++FG +DIL+NNAG A E LE
Sbjct: 58 ---ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLES------------ 102
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
+D +I LN+
Sbjct: 103 -----------------WDKII---------------------------------ALNLS 112
Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+V +R+A AR G ++ +S+ G+VG+ +Y
Sbjct: 113 AVFHGTRLALPGMRAR-NWGRIINIASVHGLVGSTGKAAY 151
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 80.7 bits (200), Expect = 3e-18
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F+ K VW+TGA GIG A AL + GAK+ ++ + + T
Sbjct: 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ-------------YPFATE 51
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+DV + ++ + LD L+N AG
Sbjct: 52 VMDVADAAQVAQVCQRLLAETERLDALVNAAG 83
Score = 56.4 bits (137), Expect = 1e-09
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 21/109 (19%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDREL 215
T +DV + ++ + LD L+N AG + + W+
Sbjct: 50 TEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQT-------- 101
Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
F +NV +L + + F + +GG +V +S A + Y S
Sbjct: 102 FAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPRIGMSAYGAS 149
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 80.2 bits (199), Expect = 4e-18
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
K +TGA+ GIG+A+A +L+ GA +++S ++ + ++ +A A
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA------- 56
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ D++ + F + G +DIL+NNA
Sbjct: 57 IAADISDPGSVKALFAEIQALTGGIDILVNNAS 89
Score = 51.7 bits (125), Expect = 4e-08
Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 16/100 (16%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
+ D++ + F + G +DIL+NNA W I ++V
Sbjct: 57 IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKI-IDV----- 110
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
N+ ++R T A + G ++ +S G P
Sbjct: 111 --NLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP 148
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 80.3 bits (199), Expect = 4e-18
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
++ V +TG + GIG A+A + G K+ ++ RS E +
Sbjct: 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL--------------AV 64
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
D+T T+ + + + + G +++LI NAG
Sbjct: 65 KCDITDTEQVEQAYKEIEETHGPVEVLIANAG 96
Score = 47.5 bits (114), Expect = 1e-06
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDR 213
+ D+T T+ + + + + G +++LI NAG R + +
Sbjct: 61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSV------ 114
Query: 214 ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
E N+ + + A L R + G +V+ SS+ G++G+
Sbjct: 115 --VETNLTGTFRVVKRANRAML-RAKKGRVVLISSVVGLLGSA 154
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 80.7 bits (200), Expect = 4e-18
Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 66/220 (30%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+KV ITG + GIGE A + GAK+V++ + + +C G+ + +
Sbjct: 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI---ADDHGQKVCNNIGSPDVISF-V 69
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
DVT+ + R D I + G LDI+ N G SI
Sbjct: 70 HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTP------------------YSIL 111
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ F V+ DI NV+
Sbjct: 112 EAGNED---------FKRVM------DI---------------------------NVYGA 129
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYT 262
+++ A + + G +V T+SI+ S YT
Sbjct: 130 FLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYT 168
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 80.3 bits (199), Expect = 4e-18
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-------NLERVKNLCVQAG-- 94
+ K ++ITGAS GIG A+AL+ ++ GA + ++A+S+ + AG
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 95 AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
L D+ + R A + FG +DIL+NNA D ++
Sbjct: 64 GLA-----LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMK 112
Score = 60.7 bits (148), Expect = 4e-11
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
D+ + R A + FG +DIL+NNA D ++ + ++N +
Sbjct: 70 DIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCA 129
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGS--YT 262
+ + L H++ + + A + YT
Sbjct: 130 QACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYT 165
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 80.3 bits (199), Expect = 5e-18
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYT 102
F NK + +TG + GIG A ++ GA + + RS+++ +E + + + G
Sbjct: 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV---KTKA 68
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV+ T + + G + LI NAG
Sbjct: 69 YQCDVSNTDIVTKTIQQIDADLGPISGLIANAG 101
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 79.9 bits (198), Expect = 5e-18
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
++ + ITGAS +G AL+L + G ++++S R+ QAGA L
Sbjct: 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAV-----AL 76
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-------RSQRAAWEDI 145
D + D + Q L +++NA + + +
Sbjct: 77 YGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRM 125
Score = 63.4 bits (155), Expect = 5e-12
Identities = 13/95 (13%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
D + D + Q L +++NA + R +F +++ + ++
Sbjct: 79 DFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTR-MFSVHMLAPYLIN 137
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
L + +V S G+ +Y
Sbjct: 138 LHCEPL-LTASEVADIVHISDDVTRKGSSKHIAYC 171
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 80.3 bits (199), Expect = 5e-18
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYT 102
V +TG GIG +A L+ G + ++ + + V GA +
Sbjct: 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA---RVIF 83
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
L D+ H+ DAV+ +FG +D L+NNAG
Sbjct: 84 LRADLADLSSHQATVDAVVAEFGRIDCLVNNAG 116
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 79.9 bits (198), Expect = 6e-18
Identities = 46/225 (20%), Positives = 79/225 (35%), Gaps = 65/225 (28%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV +ITGA+ G G A A++L+ GA ++ +LC Q + P + T
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADII-----------AVDLCDQIASVPYPLATP 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
++ T L+ + G I
Sbjct: 60 E-ELAATVK-----------------LVEDIGSR------------------------IV 77
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG----RSQRAAWEDIELEVDRELFELN 219
DV + A + + G LDI++ NAG + W D+ ++V N
Sbjct: 78 ARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDV-IDV-------N 129
Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH 264
+ V ++A + + GG +V+ SS AG+ G + +
Sbjct: 130 LTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVG 174
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 79.8 bits (198), Expect = 6e-18
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV +TG +SG+G + L GAK+ S N + L + G +S++ +
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---NEAAGQQLAAELGE--RSMF-V 57
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
DV+ AV ++ G L++L+NNAG E LE
Sbjct: 58 RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102
Score = 68.7 bits (169), Expect = 5e-14
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
DV+ AV ++ G L++L+NNAG E LE L ++N SV
Sbjct: 59 HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESV--- 115
Query: 227 SRIATSYFLA--------REQGGHLVVTSSIAGIVGAPYSGSYT 262
F+ +E GG ++ +S++ + Y+
Sbjct: 116 -------FIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYS 152
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 79.5 bits (197), Expect = 6e-18
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F ++ V +TG + GIG A+A +L+ G K+ ++ R S P+ ++ +
Sbjct: 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGV 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+DVT + R F AV + G +++L++NAG
Sbjct: 59 EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 90
Score = 47.5 bits (114), Expect = 1e-06
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDR 213
++ + +DVT + R F AV + G +++L++NAG R +E +
Sbjct: 55 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKV------ 108
Query: 214 ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
N+ +++ A+ R + G ++ S++G+ G
Sbjct: 109 --INANLTGAFRVAQRASRSMQ-RNKFGRMIFIGSVSGLWGIG 148
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 78.7 bits (195), Expect = 1e-17
Identities = 26/217 (11%), Positives = 53/217 (24%), Gaps = 71/217 (32%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLTL 105
+ +T A G A L++ G +V S ++ ER + G
Sbjct: 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT---------- 51
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
+ R DA +Q +D +++N + +E + +
Sbjct: 52 IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEAD------------- 98
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
+ + +
Sbjct: 99 -------------IRQMFE--------AL-------------------------SIFPIL 112
Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
L + A + A G ++ +S G Y+ Y
Sbjct: 113 LLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYG 148
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 78.0 bits (193), Expect = 2e-17
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+K V + AS GIG A+A LS+ GA++ + AR+ L+R + V
Sbjct: 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVC----------- 66
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
D+ + D + ++ +DIL+ NAG +++
Sbjct: 67 -DLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEA 108
Score = 46.8 bits (112), Expect = 2e-06
Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 23/102 (22%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELN 219
D+ + D + ++ +DIL+ NAG +++ +
Sbjct: 67 DLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEA--------IDSL 112
Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+++ + R + G +V +S + I +
Sbjct: 113 FLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIENLYTS 153
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 77.7 bits (192), Expect = 3e-17
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG--AHPQSIYT 102
N +V +TGAS GIG +ALQL K GA + ++ R L V G P
Sbjct: 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP----- 58
Query: 103 LTLDVTQTKYHRRCFDAVIQ-QFGCLDILINNAG 135
+ D +Q R F+ V + Q G LD+L+NNA
Sbjct: 59 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAY 92
Score = 45.3 bits (108), Expect = 7e-06
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)
Query: 168 DVTQTKYHRRCFDAVIQ-QFGCLDILINNAG---RSQRAAWEDIELEVDRELF----ELN 219
D +Q R F+ V + Q G LD+L+NNA ++ E ++ +
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV---GAPYSGS 260
+ S + G +VV SS + PY
Sbjct: 122 LRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQYMFNVPYGVG 164
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 77.7 bits (192), Expect = 4e-17
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIY 101
KV +TG++SGIG +A L+ GA +VL+ + + L Q G +
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV---KVL 58
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
D+++ + R D ++Q G +DIL+NNAG
Sbjct: 59 YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAG 92
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 77.1 bits (191), Expect = 4e-17
Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+ +TG S GIG A+A L G ++ +++R+ + GA P L
Sbjct: 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ------SLGAVP-----LPT 50
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+ + + ++ G L +L++ A + R ++ E
Sbjct: 51 DLEKDD-PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYE 92
Score = 55.2 bits (134), Expect = 3e-09
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 4/100 (4%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
L D+ + + ++ G L +L++ A + R ++ E R + L++
Sbjct: 48 LPTDLEKDD-PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAF 106
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG--SYT 262
L++ A + G ++ S+ +YT
Sbjct: 107 LLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGGPVPIPAYT 145
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 78.2 bits (193), Expect = 4e-17
Identities = 34/237 (14%), Positives = 54/237 (22%), Gaps = 65/237 (27%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
V +TGA+ +G ++A L G + L S A A
Sbjct: 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----------AAEA--------- 84
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
+A+ L S D+ +
Sbjct: 85 -------------NALSAT------LNARRPNSAITVQADLSNVATAPVSGADGSA---- 121
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWE------DIELE 210
VT A +G D+L+NNA R+ E +
Sbjct: 122 ---PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMET 178
Query: 211 VDRELFELNVFSVLSLSRIATSYFLA-----REQGGHLVVTSSIAGIVGAPYSGSYT 262
+LF N + L + R ++ YT
Sbjct: 179 ATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 235
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 77.6 bits (192), Expect = 5e-17
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ VV +TG S GIG A+ ++ G ++ ++ A + + V ++G +++ +
Sbjct: 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG--EAV-AI 81
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV F AV +QFG LD L+NNAG
Sbjct: 82 PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113
Score = 61.4 bits (150), Expect = 3e-11
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFELNVFSVLSL 226
DV F AV +QFG LD L+NNAG +++ +E + +NV +
Sbjct: 84 DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143
Query: 227 SRIATSYFLAR--EQGGHLVVTSSIAGIVGAPYSGSYTD 263
+ A QGG +V SS+A I+G+ Y D
Sbjct: 144 AAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--TQYVD 180
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 77.8 bits (192), Expect = 6e-17
Identities = 34/237 (14%), Positives = 54/237 (22%), Gaps = 65/237 (27%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
V +TGA+ +G ++A L G + L S A A
Sbjct: 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----------AAEA--------- 47
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
+A+ L S D+ +
Sbjct: 48 -------------NALSAT------LNARRPNSAITVQADLSNVATAPVSGADGSA---- 84
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWE------DIELE 210
VT A +G D+L+NNA R+ E +
Sbjct: 85 ---PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMET 141
Query: 211 VDRELFELNVFSVLSLSRIATSYFLA-----REQGGHLVVTSSIAGIVGAPYSGSYT 262
+LF N + L + R ++ YT
Sbjct: 142 ATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 198
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 77.7 bits (192), Expect = 6e-17
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSIYT 102
+TGA+ IG A+A++L + G ++V+ +S+ + L + +
Sbjct: 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN---TAVV 78
Query: 103 LTLDVTQTKYH----RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+T + ++ + FG D+L+NNA + E
Sbjct: 79 CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHE 128
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 77.3 bits (191), Expect = 7e-17
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
+KVV +TG + G G + A++L++ GA ++L +S +LE
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 92 QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ G YT +DV R + +FG LD+++ NAG
Sbjct: 68 KTGR---KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG 108
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 76.8 bits (190), Expect = 9e-17
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
NKV +TGAS GIG A+A +L+ G +V++ A ++ E V AG T
Sbjct: 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---ALTA 82
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
DV+ RR F + FG +D+L+NNAG +
Sbjct: 83 QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDA 127
Score = 61.0 bits (149), Expect = 3e-11
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
DV+ RR F + FG +D+L+NNAG + V + +N+ +
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
R A GG ++ S+ + P G Y
Sbjct: 145 REAAQRL---RVGGRIINMSTSQVGLLHPSYGIYA 176
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 76.8 bits (190), Expect = 1e-16
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIYTL 103
++ +TG SGIG A A+ ++ GA + ++ + ++VK L + G + L
Sbjct: 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLL 105
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELE 148
D++ + R + G LDIL AG+ +D+ E
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSE 151
Score = 68.7 bits (169), Expect = 9e-14
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSVLSL 226
D++ + R + G LDIL AG+ +D+ E ++ F +NVF++ +
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
++ A +G ++ TSSI +P+ Y
Sbjct: 168 TQEAIPLL---PKGASIITTSSIQAYQPSPHLLDYA 200
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 76.5 bits (189), Expect = 1e-16
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV TGA GIG +A++L + GA +V++ SS E V + GA +
Sbjct: 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAI 76
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+++ FD + FG LD +++N+G ++ E
Sbjct: 77 QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE 121
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 75.8 bits (187), Expect = 1e-16
Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 16/106 (15%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+K + + G S +G + + +P + ++
Sbjct: 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFR---------------ENPNADHSF 64
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELE 148
T+ + + + + + + +D + AG S A D L+
Sbjct: 65 TIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLK 110
Score = 73.9 bits (182), Expect = 7e-16
Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSV 223
T+ + + + + + + +D + AG S A D L+ + + ++N++S
Sbjct: 64 FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSA 123
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + I QGG V+T + A + +Y
Sbjct: 124 FASAHIGAKLL---NQGGLFVLTGASAALNRTSGMIAYG 159
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 75.7 bits (187), Expect = 2e-16
Identities = 36/227 (15%), Positives = 58/227 (25%), Gaps = 62/227 (27%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
ITG + IG ++A++L + G ++V+ S +R+ A S
Sbjct: 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLC 67
Query: 104 TLDVTQ----TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
D++ D + FG D+L+NNA
Sbjct: 68 KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNAS------------------------ 103
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
+ + AA ELF N
Sbjct: 104 -----------------------AYYPT----PLLPGDDTNGAADAKPIDAQVAELFGSN 136
Query: 220 VFSVLSLSRIATSYFLA----REQGGHLVVTSSIAGIVGAPYSGSYT 262
+ L L R R + +V + P YT
Sbjct: 137 AVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 75.9 bits (187), Expect = 2e-16
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 45 NNKVVWITGASSGIGEALALQL-SKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
V +TG + GIG A+ L +VL+AR + + G P+
Sbjct: 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ-- 60
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
LD+ + R D + +++G LD+L+NNAG A++ +
Sbjct: 61 -LDIDDLQSIRALRDFLRKEYGGLDVLVNNAG----IAFKVADPTPFHIQA 106
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 75.2 bits (186), Expect = 3e-16
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ KV+ +T A+ GIG+A AL ++ GAK++ + + S L+ ++ G T
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---YPGIQ-----TR 55
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
LDVT+ K D + LD+L N AG D E +
Sbjct: 56 VLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEK 96
Score = 57.9 bits (141), Expect = 3e-10
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 144 DIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
DI +EL P I T LDVT+ K D + LD+L N AG
Sbjct: 37 DINESKLQEL---EKYPGIQTRVLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGT 89
Query: 204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYT 262
D E + LNV S+ + + LA+ + G+++ SS+A V G Y+
Sbjct: 90 VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYS 148
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 75.3 bits (186), Expect = 3e-16
Identities = 35/220 (15%), Positives = 57/220 (25%), Gaps = 71/220 (32%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
V+ ITG++SGIG AL L++ G ++ R +++E D
Sbjct: 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------------D 41
Query: 107 VTQTKYHRRCFDAVIQQFG-CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
++ AV+ + G LD L+ AG
Sbjct: 42 LSTPGGRETAVAAVLDRCGGVLDGLVCCAG------------------------------ 71
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRELFELNVFSV 223
V L + +N G E + + +
Sbjct: 72 --------------VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP---YSGS 260
A G +A G Y+GS
Sbjct: 118 TQPGAAELPMVEAM-LAGDEARAIELAEQQGQTHLAYAGS 156
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 75.7 bits (187), Expect = 3e-16
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
KV +TGA GIG +A++L + G K++++ A S+ + E V + G+ +
Sbjct: 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV--- 84
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+V + R F+ ++ FG LDI+ +N+G +D+ E
Sbjct: 85 KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPE 129
Score = 59.9 bits (146), Expect = 9e-11
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
+V + R F+ ++ FG LDI+ +N+G +D+ E +F +N ++
Sbjct: 87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVG-----APYSGS 260
R A + E GG L++ SI G A YSGS
Sbjct: 147 REAYKHL---EIGGRLILMGSITGQAKAVPKHAVYSGS 181
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 75.3 bits (186), Expect = 3e-16
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
K ++TG S GIG A+A +L+ GA + L+ ++ + V + QAG +I
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR- 87
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D + + ++ G LDIL+N+AG A E+ +
Sbjct: 88 --ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVA 131
Score = 61.4 bits (150), Expect = 2e-11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
D + + ++ G LDIL+N+AG A E+ + E+ +N +
Sbjct: 89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148
Query: 228 RIATSYFLAREQGGHLV-VTSSIAGIVGAPYSGSYT 262
R A+ + GG ++ + S++A +V P Y+
Sbjct: 149 RSASRHL---GDGGRIITIGSNLAELVPWPGISLYS 181
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 74.9 bits (185), Expect = 5e-16
Identities = 38/231 (16%), Positives = 62/231 (26%), Gaps = 78/231 (33%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
F K ITG + G+G + A+ L++ GA + + ++ +L L
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 92 QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
+ G + + +DV G +DI I NAG S A ++E
Sbjct: 68 KTG---RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQ-- 122
Query: 152 ELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 211
+D VI
Sbjct: 123 ---------------------------WDEVI------GT-------------------- 129
Query: 212 DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
N+ + + R G +V SS+ G SY
Sbjct: 130 -------NLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHSANFAQASYV 172
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 76.2 bits (188), Expect = 5e-16
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ KV +TGA+ GIG +A ++ GA +V + E +K + + G L
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVGGTA-----L 264
Query: 104 TLDVTQTKYHRRCFDAVIQQFGC-LDILINNAG 135
TLDVT + V + G +DIL+NNAG
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAG 297
Score = 45.4 bits (108), Expect = 9e-06
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 18/99 (18%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAG--------RSQRAAWEDIELEVDREL 215
LTLDVT + V + G +DIL+NNAG W+ + + V
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAV-IAV---- 318
Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG 254
N+ + L+ +GG ++ SS+AGI G
Sbjct: 319 ---NLLAPQRLTEGLVGNGT-IGEGGRVIGLSSMAGIAG 353
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 74.5 bits (184), Expect = 6e-16
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ KV +TG+ GIG A+A+ L + GAK+V++ A S+ + E+V + G+ +I
Sbjct: 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA- 75
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+ Q + FD + FG LDI ++N+G +D+ E
Sbjct: 76 --DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEE 118
Score = 60.7 bits (148), Expect = 4e-11
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
D+ Q + FD + FG LDI ++N+G +D+ E +F LN ++
Sbjct: 76 DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 228 RIATSYFLAREQGGHLV-VTSSIAGIVGAPYSGSYT 262
R A + +GG +V +S+ + P Y+
Sbjct: 136 REAYRHL---TEGGRIVLTSSNTSKDFSVPKHSLYS 168
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 72.9 bits (180), Expect = 1e-15
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+TG S GIG+A+ L + V++ + +++ +
Sbjct: 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA------------ENLKFI 49
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
D+T+ + D + + D + NAG + + DI++E
Sbjct: 50 KADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIE 92
Score = 60.2 bits (147), Expect = 4e-11
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
D+T+ + D + + D + NAG + + DI++E +++ +LNV+S +
Sbjct: 51 ADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ + + G +V S + P S +YT
Sbjct: 109 IKGLENNL---KVGASIVFNGSDQCFIAKPNSFAYT 141
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 72.6 bits (179), Expect = 2e-15
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 45 NNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSI 100
KVV +TGAS G+G A ++ GA + ++ S + E VK L G
Sbjct: 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI---KA 75
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
V + + V+ FG +D I NAG
Sbjct: 76 KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAG 110
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 72.7 bits (178), Expect = 4e-15
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYTL 103
+ +TG + GIG + QLS G +VL+ R + V+ L ++ +++
Sbjct: 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL---KNSNHENVVFH 67
Query: 104 TLDVTQTKYHRRCF-DAVIQQFGCLDILINNAGRS 137
LDVT D + FG LDIL+NNAG +
Sbjct: 68 QLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA 102
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 71.9 bits (177), Expect = 5e-15
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
++V +TGASSG+G A+ L++ GA ++ E A ++
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP------AAELGAAVRFR 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DVT Q+FG + L+N AG
Sbjct: 59 NADVTNEADATAALAFAKQEFGHVHGLVNCAG 90
Score = 49.1 bits (118), Expect = 3e-07
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 13/106 (12%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFE--LNV----- 220
DVT Q+FG + L+N AG + + F + V
Sbjct: 61 DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 221 FSVLSLS--RIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
F+++ L+ ++ A + G +V T+SIA G A Y+ S
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAAS 166
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 72.2 bits (178), Expect = 6e-15
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLT 104
K V ITG SGIG A+++ +K GA + ++ + K + G L
Sbjct: 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLP 103
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWEDIELE 148
D++ ++ + ++Q G L+IL+NN + + E I E
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAE 148
Score = 61.8 bits (151), Expect = 2e-11
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWEDIELEVDRELFELNVFSVLSL 226
D++ ++ + ++Q G L+IL+NN + + E I E + F +N+FS +
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164
Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
++ A S+ +QG ++ T+SI G
Sbjct: 165 TKAALSHL---KQGDVIINTASIVAYEGNE 191
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 71.5 bits (176), Expect = 7e-15
Identities = 38/223 (17%), Positives = 66/223 (29%), Gaps = 66/223 (29%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
F ++G + G+GEA +L G +V++ E+ K L + G + + T
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL---AAEKGKALADELGNRAEFVST- 83
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
+VT +A Q ++ + G V R+
Sbjct: 84 --NVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQ------RIVQRDG---------S 126
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+ F I + G ++V
Sbjct: 127 PADMGG---------FTKTID--------LYLNG----------------------TYNV 147
Query: 224 LSLS--RIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
L IA + + G LV+T+SIAG G Y+ +
Sbjct: 148 ARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAA 190
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 71.1 bits (175), Expect = 8e-15
Identities = 44/223 (19%), Positives = 71/223 (31%), Gaps = 67/223 (30%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
V ITG +SG+G A A +L GA VL + + G +
Sbjct: 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDL---PNSGGEAQAKKLGNNCVFAPA-- 65
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
DVT K + +FG +D+ +N AG + +
Sbjct: 66 -DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVAS------------------------ 100
Query: 165 LTLDVTQTKYHRR-CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
T ++ + + H F V+ +N G F+V
Sbjct: 101 KTYNLKKGQTHTLEDFQRVLD--------VNLMG----------------------TFNV 130
Query: 224 LSLS--RIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
+ L + + Q G ++ T+S+A G A YS S
Sbjct: 131 IRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSAS 173
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 68.7 bits (169), Expect = 6e-14
Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 76/231 (32%)
Query: 38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
N L KV +TGAS GIG A+A +L+ GA + + + + A
Sbjct: 2 NSMLK---GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR-----------KEEA-- 45
Query: 98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYA 157
+ + + I + G A
Sbjct: 46 --------------------EETVYE-------IQSNGG--SAF---------------- 60
Query: 158 YRPSIYTLTLDVTQTKYHRRCFDAVIQQF------GCLDILINNAGRSQRAAWEDIELEV 211
++ ++ + ++ + DILINNAG A E+ +
Sbjct: 61 ------SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF 114
Query: 212 DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+ +N + + + A S ++ SS A + P +Y+
Sbjct: 115 FDRMVSVNAKAPFFIIQQALSRL---RDNSRIINISSAATRISLPDFIAYS 162
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 68.6 bits (168), Expect = 1e-13
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLV----------LSARSSSNLERVKNLCVQA 93
+ +VV +TGA GIG A AL + GA++V A S + V + A
Sbjct: 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 94 GAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
G + + +V ++ FG LD+L+NNAG
Sbjct: 85 GGEAVADGS---NVADWDQAAGLIQTAVETFGGLDVLVNNAG 123
Score = 48.5 bits (116), Expect = 6e-07
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 21/102 (20%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELN 219
+V ++ FG LD+L+NNAG + ++ + + V +
Sbjct: 94 NVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAV-IAV-------H 145
Query: 220 VFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAP 256
+ + R A +Y+ + G ++ TSS AG+ G+
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV 187
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 64.6 bits (158), Expect = 7e-13
Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
+T+D+T ++ ++ Q G +D +++ G + + ++ E + +
Sbjct: 38 DVTVDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQ 93
Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
++L + G +T+ I S
Sbjct: 94 INLVLLGIDSL---NDKGSFTLTTGIMMEDPIVQGASAA 129
Score = 60.4 bits (147), Expect = 3e-11
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 25/104 (24%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
N + + GAS +G A+ +L K A+++ + R S +T
Sbjct: 2 NAMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSG--------------------DVT 40
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+D+T ++ ++ Q G +D +++ G + + ++ E
Sbjct: 41 VDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPE 80
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 65.0 bits (159), Expect = 1e-12
Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 21/105 (20%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
++ I+G ++GIG A L G ++V + + D
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41
Query: 107 VTQTKYHRRCFDAVIQQ-FGCLDILINNAGRSQRAAWEDIELEVD 150
++ + ++ V+ + +D L+ AG + + V+
Sbjct: 42 LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVN 86
Score = 48.1 bits (115), Expect = 6e-07
Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQ-FGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFS 222
+ D++ + ++ V+ + +D L+ AG + ++ +N F
Sbjct: 38 VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNV--------VSVNYFG 89
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY 257
L L + VV SS+A A
Sbjct: 90 ATELMDAFLPA-LKKGHQPAAVVISSVASAHLAFD 123
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 63.9 bits (156), Expect = 4e-12
Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 90/233 (38%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
F+ +VV +TGA G+G A AL ++ GA +V+ + SS ++V + G
Sbjct: 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 95 AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
+ Y V + + FG +D+++NNAG + ++ I E
Sbjct: 67 GKAVANYD---SVEAG---EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED----- 115
Query: 155 TYAYRPSIYTLTLDVTQTKYHRRCFDAVIQ-----QFGCLDILINNAGRSQRAAWEDIEL 209
+D + + F RAAW+
Sbjct: 116 ------------------------WDIIQRVHLRGSFQVT-----------RAAWD---- 136
Query: 210 EVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
+ ++Q G +++T+S +GI G +Y
Sbjct: 137 -----------------------HM--KKQNYGRIIMTASASGIYGNFGQANY 164
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 64.7 bits (158), Expect = 5e-12
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
F +KVV ITGA G+G+ +L+ +K GAK+V+ +S + V + V+ G
Sbjct: 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65
Query: 95 AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ Y +V + + ++ FG + ++INNAG
Sbjct: 66 GVAVADYN---NVLDGD---KIVETAVKNFGTVHVIINNAG 100
Score = 53.9 bits (130), Expect = 1e-08
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
+ ++ FG + ++INNAG + A+ + + + + + ++++ ++++ A YF ++Q
Sbjct: 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYF--QKQ 140
Query: 240 G-GHLVVTSSIAGIVGAPYSGSY 261
G +V TSS AG+ G +Y
Sbjct: 141 KYGRIVNTSSPAGLYGNFGQANY 163
Score = 52.8 bits (127), Expect = 4e-08
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
VI ++G +DIL+NNAG + ++ + + + ++++ +LSR+A YF E+
Sbjct: 387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYF--VEK 444
Query: 240 G-GHLVVTSSIAGIVG----APYS 258
G ++ +S +GI G A YS
Sbjct: 445 QFGRIINITSTSGIYGNFGQANYS 468
Score = 50.1 bits (120), Expect = 3e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+KVV ITGA +G+G+ A +K GAK+V++ + + + AG
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGEAWPDQH- 376
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DV + VI ++G +DIL+NNAG
Sbjct: 377 --DVAKDS--EAIIKNVIDKYGTIDILVNNAG 404
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 62.4 bits (152), Expect = 1e-11
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%)
Query: 45 NNKVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
+ + ITG + G+G L L L + R+ + +++L A H +I+
Sbjct: 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL---AKNHS-NIH 75
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
L +D+ + + + L++L NNAG + + I V + +
Sbjct: 76 ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPK--SARIT-AVRSQELLDTLQ 132
Score = 49.7 bits (119), Expect = 2e-07
Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 13/115 (11%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAG-RSQRAAWEDIELEVDRELF 216
+I+ L +D+ + + + L++L NNAG + A + + +
Sbjct: 72 SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTL 131
Query: 217 ELNVFSVLSL----------SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
+ N + L + A ++ SSI G + G
Sbjct: 132 QTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGM 186
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 61.5 bits (150), Expect = 2e-11
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
+ V +TG +SG+G A +L GA++V+ ++ V +L +A
Sbjct: 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADLGDRARFAA------- 58
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DVT D + G L I++N AG
Sbjct: 59 ADVTDEAAVASALDLA-ETMGTLRIVVNCAG 88
Score = 42.6 bits (101), Expect = 4e-05
Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 16/108 (14%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFE----LNVFSV 223
DVT D + G L I++N AG + F +N+
Sbjct: 60 DVTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 224 LSLSRIATSYFLARE-------QGGHLVVTSSIAGIVG----APYSGS 260
++ R+A E + G ++ T+S+A G A YS S
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSAS 166
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 61.2 bits (149), Expect = 2e-11
Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
V +TGA+ GIG L QL K ++ +AR +K++ ++ L
Sbjct: 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHVL 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGC--LDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
L VT K V + G L +LINNAG E +R +
Sbjct: 57 PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS---YGTNTEPNRAVIAEQLD 111
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 59.6 bits (145), Expect = 7e-11
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 165 LTLDVTQTKYHRRCFDAVIQ--QFGCLDILINNAG--RSQRAAWEDIELEVDRELFELNV 220
+ + T+ + + Q +D + AG A+ +D D + + +V
Sbjct: 47 VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADL-MIKQSV 105
Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
+S +++AT++ + GG L +T + A + P Y
Sbjct: 106 WSSAIAAKLATTHL---KPGGLLQLTGAAAAMGPTPSMIGYG 144
Score = 58.9 bits (143), Expect = 1e-10
Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 14/122 (11%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+ V + G +G A+ K G ++ S+++ + +
Sbjct: 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---SNILVDGN--------K 51
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
+ T+ + A Q +D + AG A + + + S+++
Sbjct: 52 NWTEQEQSILEQTASSLQGSQVDGVFCVAG---GWAGGSASSKDFVKNADLMIKQSVWSS 108
Query: 166 TL 167
+
Sbjct: 109 AI 110
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 59.5 bits (145), Expect = 7e-11
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+ +TG +SG+G A AL L G ++V+ E + V+
Sbjct: 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDL---RREGEDLIYVEG------------ 46
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
DVT+ + RR Q+ L +++ AG
Sbjct: 47 DVTREEDVRRAVARA-QEEAPLFAVVSAAG 75
Score = 43.4 bits (103), Expect = 3e-05
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF----ELNVFSV 223
DVT+ + RR Q+ L +++ AG E E F E+N+
Sbjct: 47 DVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGT 105
Query: 224 LSLSRIATSYFLARE-----QGGHLVVTSSIAGIVG----APYSGS 260
++ R+A Q G +V T+S+A G A Y+ S
Sbjct: 106 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAAS 151
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 59.6 bits (145), Expect = 1e-10
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP-QSIYTLTL 105
+ V ITGA+SG+G A +L++ GA ++++ R + + A + L
Sbjct: 17 RTVVITGANSGLGAVTARELARRGATVIMAVR---DTRK----GEAAARTMAGQVEVREL 69
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
D+ RR D D+LINNAG
Sbjct: 70 DLQDLSSVRRFAD----GVSGADVLINNAG 95
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 59.8 bits (145), Expect = 2e-10
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 23/105 (21%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
++ +V +TGA +G+G AL ++ GAK+V+ S + V + +AG
Sbjct: 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76
Query: 95 ----AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
A S+ + + I+ FG +DIL+NNAG
Sbjct: 77 GEAVADYNSVID----------GAKVIETAIKAFGRVDILVNNAG 111
Score = 51.7 bits (124), Expect = 8e-08
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
+ I+ FG +DIL+NNAG + + + + ++++ ++ A Y ++Q
Sbjct: 94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM--KKQ 151
Query: 240 G-GHLVVTSSIAGIVGAPYSGSY 261
G +++TSS +GI G +Y
Sbjct: 152 NYGRIIMTSSNSGIYGNFGQVNY 174
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 58.5 bits (142), Expect = 2e-10
Identities = 14/84 (16%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 180 DAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE 238
+ +D ++ AG + A + +++ ++++ S +AT + +
Sbjct: 68 VGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL---K 124
Query: 239 QGGHLVVTSSIAGIVGAPYSGSYT 262
+GG L + + A + G P Y
Sbjct: 125 EGGLLTLAGAKAALDGTPGMIGYG 148
Score = 58.1 bits (141), Expect = 3e-10
Identities = 10/110 (9%), Positives = 26/110 (23%), Gaps = 13/110 (11%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
+ V + G +G + + + + + +
Sbjct: 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQV 64
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDR 151
T +V + +D ++ AG A + + D
Sbjct: 65 TAEV-----------GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDL 103
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 50.3 bits (120), Expect = 1e-07
Identities = 9/92 (9%), Positives = 23/92 (25%), Gaps = 11/92 (11%)
Query: 44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
K + + +G A L+ GA++VL R + + + +
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK----VNVT 172
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
+ + + +
Sbjct: 173 AAETA-------DDASRAEAVKGAHFVFTAGA 197
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 49.9 bits (118), Expect = 5e-07
Identities = 41/264 (15%), Positives = 76/264 (28%), Gaps = 72/264 (27%)
Query: 14 YIIVQGLF-----LLAVD-CDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLS 67
+++ G+ +A+D C Y K + K+ W+ + E + L
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSY--------KVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 68 KCGAKLVLS----ARSSSNL--------ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR 115
K ++ + + SSN+ ++ L + + L L Q
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-YENCL--LVLLNVQNAKAWN 260
Query: 116 CFDAVIQQFGCLDILI-----NNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVT 170
F+ C IL+ A I L+ T S+ LD
Sbjct: 261 AFN-----LSC-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 171 QTKYHRRCFDA---VIQQFGCLDILINNAGRSQRAAWED---------IELEVD------ 212
R + + + W+ IE ++
Sbjct: 315 PQDLPREVLTTNPRRLSIIAES--IRDGLATWDN--WKHVNCDKLTTIIESSLNVLEPAE 370
Query: 213 -RELFE-LNVF--------SVLSL 226
R++F+ L+VF +LSL
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSL 394
Score = 36.8 bits (84), Expect = 0.007
Identities = 20/140 (14%), Positives = 49/140 (35%), Gaps = 20/140 (14%)
Query: 112 YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE----LEVDRELFTYAYRPSIYTLTL 167
+H F+ Q+ DIL + A ++ + ++ + + + I
Sbjct: 4 HHHMDFETGEHQYQYKDILSVF----EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD 59
Query: 168 DVTQTKYHRRCFD-------AVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELN 219
V+ T R F ++Q+F ++L N E + + ++
Sbjct: 60 AVSGT---LRLFWTLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ 115
Query: 220 VFSVLSLSRIATSYFLAREQ 239
+ + +++ Y ++R Q
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQ 135
Score = 36.0 bits (82), Expect = 0.011
Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 70/259 (27%)
Query: 12 LIYIIVQGLFLLAVDCDLYLFFIEKINKRL-NYFNNKV----------VWITGASSGIGE 60
L+Y I + I I L +K V ++
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ----NAKAWN 260
Query: 61 ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT---KY-HRRC 116
A L C K++L+ R + + + TLT D ++ KY R
Sbjct: 261 AFNLS---C--KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 117 FD----------AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLT 166
D + + + W+ + + +L T I +
Sbjct: 316 QDLPREVLTTNPRRLSIIAES--IRDGLATWDN--WKHVNCD---KLTT------IIESS 362
Query: 167 LDVTQTKYHRRCFDA-VIQQF--------GCLDILINNAGRSQRAAWED-IELEVDRELF 216
L+V + +R+ FD + F L ++ W D I+ +V +
Sbjct: 363 LNVLEPAEYRKMFDRLSV--FPPSAHIPTILLSLI-----------WFDVIKSDVMVVVN 409
Query: 217 ELNVFSVLSLSRIATSYFL 235
+L+ +S++ ++ +
Sbjct: 410 KLHKYSLVEKQPKESTISI 428
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 42.6 bits (101), Expect = 5e-05
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
NK I G ++ I +A L + GAKLV + R + + ++ L Q +
Sbjct: 31 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHL-- 88
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
+DV + F+ + + G +D + ++ + E RE F A S
Sbjct: 89 YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 148
Query: 163 YTLT 166
Y+LT
Sbjct: 149 YSLT 152
Score = 28.4 bits (64), Expect = 2.4
Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF--- 216
P + +DV + F+ + + G +D + ++ + E RE F
Sbjct: 84 PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA 143
Query: 217 -ELNVFSVLSLSRIATSYFLAREQGGHLV 244
+++ +S+ ++ A +GG +V
Sbjct: 144 QDISSYSLTIVAHEAKKLM---PEGGSIV 169
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 42.2 bits (100), Expect = 7e-05
Identities = 27/138 (19%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 31 LFFIEKINKRLNYFNNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKN 88
F K + K ITG ++ I +A + GA+L + + +RV+
Sbjct: 6 SKFSNKGEVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVRE 65
Query: 89 LCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
+ G+ + DV+ + + + + +G LDI++++ + + ++ ++
Sbjct: 66 IAKGFGSD----LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVID 121
Query: 149 VDRELFTYAYRPSIYTLT 166
RE F A S+Y+L
Sbjct: 122 TSREGFKIAMDISVYSLI 139
Score = 28.0 bits (63), Expect = 2.7
Identities = 16/88 (18%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF---- 216
S + DV+ + + + + +G LDI++++ + + ++ ++ RE F
Sbjct: 72 SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAM 131
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLV 244
+++V+S+++L+R + G +V
Sbjct: 132 DISVYSLIALTRELLPLM--EGRNGAIV 157
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid
biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 41.4 bits (98), Expect = 1e-04
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
+ K + G ++ +G A+A +L + GA++ LS ++ + L G
Sbjct: 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA----LL 62
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
DVTQ + F V + FG LD L++ + R A E ++ R+ + A S
Sbjct: 63 FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 163 YTLT 166
Y+L
Sbjct: 123 YSLV 126
Score = 29.1 bits (66), Expect = 1.2
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF--- 216
DVTQ + F V + FG LD L++ + R A E ++ R+ +
Sbjct: 58 GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117
Query: 217 -ELNVFSVLSLSRIATSYFLAREQGGHLV 244
E++ +S+++++R A +GG +V
Sbjct: 118 LEVSAYSLVAVARRAEPLL---REGGGIV 143
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain
dehydrogenase/reductase, oxidoreductase, 2-ENOY
thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Length = 357
Score = 41.5 bits (98), Expect = 1e-04
Identities = 10/50 (20%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 48 VVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
V ++SG+G+A +Q++ G + + R +++++ + GA
Sbjct: 170 SVIQNASNSGVGQA-VIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE 218
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 40.2 bits (95), Expect = 3e-04
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
+ + + G ++ I +A L + GA+L+ + + V L +
Sbjct: 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN--DSII 63
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
L DVT CF ++ +Q G + + + + + L +R+ F A+ S
Sbjct: 64 LPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISS 123
Query: 163 YTLT 166
Y+LT
Sbjct: 124 YSLT 127
Score = 27.1 bits (61), Expect = 6.1
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF--- 216
L DVT CF ++ +Q G + + + + + L +R+ F
Sbjct: 59 NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLA 118
Query: 217 -ELNVFSVLSLSRIATSYFLAREQGGHLV 244
++ +S+ ++ + A +GG +V
Sbjct: 119 HNISSYSLTAVVKAARPMM---TEGGSIV 144
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 39.5 bits (93), Expect = 5e-04
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
K I G ++ I +A GA L + + S +RV+ + + + Y
Sbjct: 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSP----YV 60
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
LDV++ ++ + +++V + G LD ++++ + + A E LE + F A S+
Sbjct: 61 YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISV 120
Query: 163 YTLT 166
Y+L
Sbjct: 121 YSLI 124
Score = 27.2 bits (61), Expect = 5.8
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF--- 216
S Y LDV++ ++ + +++V + G LD ++++ + + A E LE + F
Sbjct: 56 NSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA 115
Query: 217 -ELNVFSVLSLSRIATSYFLAREQGGHLV 244
E++V+S++ L+ G ++
Sbjct: 116 MEISVYSLIELTNTLKPLL---NNGASVL 141
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 39.5 bits (93), Expect = 6e-04
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 6/124 (4%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
K I G ++ + +A + GA++ L+ S + +RV L G T
Sbjct: 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVK----LT 84
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
+ DV+ + F + +++G LD +++ S + + ++ F + S
Sbjct: 85 VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISC 144
Query: 163 YTLT 166
Y+ T
Sbjct: 145 YSFT 148
Score = 26.8 bits (60), Expect = 7.5
Identities = 13/89 (14%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF--- 216
T+ DV+ + F + +++G LD +++ S + + ++ F
Sbjct: 80 GVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTS 139
Query: 217 -ELNVFSVLSLSRIATSYFLAREQGGHLV 244
++ +S ++ A GG ++
Sbjct: 140 MHISCYSFTYIASKAEPLM---TNGGSIL 165
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 39.1 bits (92), Expect = 7e-04
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
K I G ++ I +A + GA+L + + + +RV+ L + GA
Sbjct: 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAF----VA 85
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
DV F+ + +++G LD L++ G S + ++ FT S+
Sbjct: 86 GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISV 145
Query: 163 YTLT 166
Y+LT
Sbjct: 146 YSLT 149
Score = 26.8 bits (60), Expect = 7.5
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF---- 216
+ DV F+ + +++G LD L++ G S + ++ F
Sbjct: 82 AFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTM 141
Query: 217 ELNVFSVLSLSRIA 230
++V+S+ ++SR A
Sbjct: 142 LISVYSLTAVSRRA 155
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 39.5 bits (92), Expect = 0.001
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
Query: 44 FNNKVVWITGASSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
F +K V ITGA G IG + L + GAK V+ S + + + QSIY
Sbjct: 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK-VVVTTSRFSKQVTD--------YYQSIY 523
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics,
PSI-2, protein structure initiative, MI center for
structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A
{Vibrio fischeri} PDB: 3pvz_A*
Length = 399
Score = 38.9 bits (91), Expect = 0.001
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 22 LLAVDCDLYLFFIEKINKRL-NYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARS 79
L+ D +L+ I K L + + + G + IG+A+ ++ K KL + S
Sbjct: 10 LIGRDTELFHQDINANEKELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS 69
Query: 80 SSNL-ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD 118
+N+ E V+++ G T LD+ +Y
Sbjct: 70 ENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA 109
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific]
1,mitochondrial; oxidoreductase, thioester reduction,
fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2
c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Length = 364
Score = 38.5 bits (90), Expect = 0.001
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 48 VVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
G +S +G+ A Q+ K + R NL+ V + GA
Sbjct: 170 WFIQNGGTSAVGKY-ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT 218
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase,
cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A
{Streptomyces SP} PDB: 4a10_A
Length = 447
Score = 38.6 bits (90), Expect = 0.001
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 48 VVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
+V I GAS G+G A+Q K G V S+ V+ L G
Sbjct: 223 IVLIWGASGGLGSY-AIQFVKNGGGIPVAVVSSAQKEAAVRAL----GCD 267
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A {Burkholderia
pseudomallei 1710B}
Length = 271
Score = 38.0 bits (89), Expect = 0.002
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 7/135 (5%)
Query: 35 EKINKRLNYFNNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ 92
+ + + + K + +TG S I +A + GA+L + +R+ +
Sbjct: 3 HHHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE 62
Query: 93 AGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE-DIELEVDR 151
G+ DV F ++ + LD L+++ G + R A D + R
Sbjct: 63 FGSE----LVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTR 118
Query: 152 ELFTYAYRPSIYTLT 166
E F A+ S Y+
Sbjct: 119 ENFRIAHDISAYSFP 133
>3krt_A Crotonyl COA reductase; structural genomics, protein structure
initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces
coelicolor} PDB: 3hzz_A
Length = 456
Score = 37.9 bits (88), Expect = 0.003
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 48 VVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
V I GAS G+G A Q + GA + S E + + GA
Sbjct: 231 NVLIWGASGGLGSY-ATQFALAGGANPICVVSSPQKAEICRAM----GAE 275
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II,
alcohol dehydrogenase superf structural genomics; 1.96A
{Novosphingobium aromaticivorans}
Length = 343
Score = 36.8 bits (86), Expect = 0.005
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 49 VWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
V I G G+G +A+Q++ GA+ V + S+LE V++L GA P D
Sbjct: 154 VLIQGGGGGVG-HVAIQIALARGAR-VFATARGSDLEYVRDL----GATPIDASREPEDY 207
Query: 108 TQTKYHRRCFDAVI 121
+ FD V
Sbjct: 208 AAEHTAGQGFDLVY 221
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural
genomics, NPPSFA, natio project on protein structural
and functional analyses; 2.30A {Thermus thermophilus}
Length = 343
Score = 36.4 bits (85), Expect = 0.006
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 49 VWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
V + A SG+ A A+Q++K GA+++ +A S L R K L GA
Sbjct: 170 VLVMAAGSGVSVA-AIQIAKLFGARVIATAGSEDKLRRAKAL----GAD 213
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Length = 321
Score = 36.4 bits (85), Expect = 0.007
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 49 VWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
V I + G+G LA+QL+K G V++ S N +K L GA Y D
Sbjct: 156 VLIHAGAGGVG-HLAIQLAKQKGTT-VITTASKRNHAFLKAL----GAEQCINYHEE-DF 208
Query: 108 TQTKYHRRCFDAVI 121
DAVI
Sbjct: 209 LL--AISTPVDAVI 220
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A*
1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A*
1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 36.0 bits (84), Expect = 0.007
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
+ K + +TG +S I +A + + GA+L + ++ RV+ Q G+
Sbjct: 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD----IV 63
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE-DIELEVDRELFTYAYRPS 161
L DV + F + + + D +++ G + + D V RE F A+ S
Sbjct: 64 LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS 123
Query: 162 IYTLT 166
Y+
Sbjct: 124 SYSFV 128
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein
structure initiati structural genomics research
consortium, nysgrc; 2.45A {Rhizobium etli}
Length = 353
Score = 36.0 bits (84), Expect = 0.009
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
I G +SGIG A+QL++ GA++ +A S+ E + L GA
Sbjct: 173 IHGGTSGIGTT-AIQLARAFGAEVYATAGSTGKCEACERL----GAK 214
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase;
2.10A {Homo sapiens}
Length = 349
Score = 35.3 bits (82), Expect = 0.017
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 6/48 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHP 97
+ A G+G+A QL V S+ E +K+ H
Sbjct: 148 VHSAGGGVGQA-VAQLCSTVPNVTVFGTASTFKHEAIKDS----VTHL 190
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases,
QUIN oxidoreductase, oxidative stress response; HET:
NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Length = 354
Score = 34.9 bits (81), Expect = 0.018
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 49 VWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
V I SG+G A A+QL++ GA +++A S L+ + L GA
Sbjct: 166 VLIHAGLSGVGTA-AIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA 209
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural
genomics/proteomics initiative, RSGI, structural
genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2
c.2.1.1 PDB: 1iyz_A 2cf2_D
Length = 302
Score = 34.8 bits (81), Expect = 0.022
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ A+ +G A A+Q+++ G +++ +A L L + GA
Sbjct: 131 VQAAAGALGTA-AVQVARAMGLRVLAAASRPEKLA----LPLALGAE 172
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 33.7 bits (78), Expect = 0.047
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 45 NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
K + ITG S I +A + + GA+L + +RV+ LC +
Sbjct: 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF-KDRVEKLCAEFNPAA----V 79
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE-DIELEVDRELFTYAYRPS 161
L DV + + F + + + LD ++++ + R E + V RE F+ A+ S
Sbjct: 80 LPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDIS 139
Query: 162 IYTLT 166
Y+
Sbjct: 140 AYSFA 144
Score = 26.8 bits (60), Expect = 7.4
Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE-DIELEVDRELF--- 216
L DV + + F + + + LD ++++ + R E + V RE F
Sbjct: 76 PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIA 135
Query: 217 -ELNVFSVLSLSRIATSYFLAREQGGHLV 244
+++ +S +L++ S + + +V
Sbjct: 136 HDISAYSFAALAKEGRSMM--KNRNASMV 162
>4eye_A Probable oxidoreductase; structural genomics, niaid, national
institute of allergy AN infectious diseases; 2.10A
{Mycobacterium abscessus}
Length = 342
Score = 33.7 bits (78), Expect = 0.053
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ GA+ GIG A A+Q++K GAK++ ++ E GA
Sbjct: 165 VLGAAGGIGTA-AIQIAKGMGAKVIAVVNRTAATE----FVKSVGAD 206
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.5 bits (76), Expect = 0.072
Identities = 42/306 (13%), Positives = 89/306 (29%), Gaps = 82/306 (26%)
Query: 11 YLIYIIVQ--GLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSK 68
YL+ I + + ++ + Y+ + + + + TG S G+ A+A+ +
Sbjct: 230 YLLSIPISCPLIGVIQLAH--YVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETD 287
Query: 69 CGAKLVLSARSSSNLERVKNL------CVQAGAH---PQSIYTLTLDVTQTK-------- 111
+S R + + L C +A + P SI +L+ +
Sbjct: 288 SWESFFVSVRKA-----ITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSIS 342
Query: 112 -YHRRCFDAVIQQFGC-------LDI-LINN------AG------------RSQRAAWED 144
+ + + ++I L+N +G R +A
Sbjct: 343 NLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAP--- 399
Query: 145 IELEVDRELFTYAYRPSIYTLTLDVTQTKYH----RRCFDAVIQQFGCLDILINNA---- 196
L+ R F+ + L V + +H D + + ++ N
Sbjct: 400 SGLDQSRIPFS-ERKLKFSNRFLPVA-SPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI 457
Query: 197 -------GRSQRAAWEDIELEVDRELFELNVF--SVLSLSRIATSYFLAREQGGHLVVTS 247
G R I + + L V + ++ L GG S
Sbjct: 458 PVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFK---ATHILDFGPGG----AS 510
Query: 248 SIAGIV 253
+ +
Sbjct: 511 GLGVLT 516
Score = 30.0 bits (67), Expect = 1.0
Identities = 18/153 (11%), Positives = 43/153 (28%), Gaps = 47/153 (30%)
Query: 97 PQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTY 156
P + + + +Q + F+ ++ + D E EL
Sbjct: 23 PTASFFI---ASQ---LQEQFNKILPE-------------PTEGFAADDEPTTPAELVGK 63
Query: 157 --AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-----EL 209
Y + +L ++ + + + +F L N DI +L
Sbjct: 64 FLGY---VSSLVEPSKVGQF-DQVLNLCLTEFEN-CYLEGN----------DIHALAAKL 108
Query: 210 EVDRELFELNVFSVLSLSRIATSYFLAREQGGH 242
+ + +++ + +Y AR
Sbjct: 109 LQENDT------TLVKTKELIKNYITARIMAKR 135
Score = 27.7 bits (61), Expect = 5.3
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 13/65 (20%)
Query: 183 IQQFG-CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSR----IATSYFLAR 237
Q+ G +D+ + + + W D + FS+L + T +F
Sbjct: 1626 SQEQGMGMDLYKTSK--AAQDVWN----RADNHFKDTYGFSILDIVINNPVNLTIHFGG- 1678
Query: 238 EQGGH 242
+ G
Sbjct: 1679 -EKGK 1682
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase,
quinon reduction, structural genomics, structural
genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP:
b.35.1.2 c.2.1.1
Length = 351
Score = 32.9 bits (76), Expect = 0.076
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ GAS G+G A A Q+++ G K++ +A + + + +Q GAH
Sbjct: 176 VHGASGGVGLA-ACQIARAYGLKILGTAGTEEGQK----IVLQNGAH 217
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase,
INHA, enoyl acyl carrier reductase, pyrrolid
carboxamide; HET: NAD 566; 1.62A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A*
2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A*
2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A*
3fnh_A* 3oew_A* 2aqh_A* ...
Length = 269
Score = 33.0 bits (76), Expect = 0.083
Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 19/132 (14%)
Query: 45 NNKVVWITGASS------GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
+ K + ++G + I Q GA+LVL+ L ++ + + A
Sbjct: 6 DGKRILVSGIITDSSIAFHIARVAQEQ----GAQLVLTGFD--RLRLIQRITDRLPA--- 56
Query: 99 SIYTLTLDVTQTKYHRRCFDAVIQQFGC---LDILINNAGRSQRAAWE-DIELEVDRELF 154
L LDV ++ V + G LD ++++ G + + +
Sbjct: 57 KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV 116
Query: 155 TYAYRPSIYTLT 166
+ S Y+
Sbjct: 117 SKGIHISAYSYA 128
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold,
structural GE joint center for structural genomics,
JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Length = 349
Score = 32.6 bits (75), Expect = 0.097
Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
+T +S + + + L+K G + +++ R + L GA
Sbjct: 170 MTAGASQLCKL-IIGLAKEEGFRPIVTVRRDEQIA----LLKDIGAA 211
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain,
beta-barrel, mixed alpha-beta, hexamer; 2.90A
{Saccharomyces cerevisiae} SCOP: c.66.1.6
Length = 328
Score = 32.7 bits (74), Expect = 0.11
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH 96
I + + F +K+V G +GI L++ +K GAK V+ SS +E K L V+
Sbjct: 30 IIQNKDLFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKEL-VELNGF 85
Query: 97 PQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
I L + D +I ++ +L + + A +
Sbjct: 86 SDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARD 132
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus
norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Length = 349
Score = 32.7 bits (74), Expect = 0.11
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 26 DCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER 85
D L + + + F +KVV G+ +GI L + +K GA+ V+ SS +
Sbjct: 47 DEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDY 103
Query: 86 VKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI 121
+ V+A + + V + + D +I
Sbjct: 104 AVKI-VKANKLDHVVTIIKGKVEEVELPVEKVDIII 138
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty
acid biosynthesis II, short-chain dehydrogenase
reductase superfamily; HET: NAI; 1.80A {Yersinia pestis}
PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Length = 405
Score = 32.4 bits (73), Expect = 0.15
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 47 KVVWITGASSGIGEALALQLS-KCGAKLVLSARSSSNLER-------VKNLCVQAGAHPQ 98
K V + GAS+G G A + + CGA + E + A +
Sbjct: 48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK 107
Query: 99 SIY--TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL 147
+Y ++ D + + DA+ Q G +D +I + +R + E+
Sbjct: 108 GLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEV 158
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative
quinone oxidoreductase, unknown function, PSI-2; 1.76A
{Bacillus thuringiensis}
Length = 340
Score = 31.8 bits (73), Expect = 0.19
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 51 ITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ S IG QLS+ +L+ R++ + E ++ GA
Sbjct: 150 VNACGSAIGHL-FAQLSQILNFRLIAVTRNNKHTE----ELLRLGAA 191
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A
{Pseudomonas aeruginosa}
Length = 342
Score = 31.5 bits (72), Expect = 0.23
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 51 ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ 92
+ GA+ +G A + G LVL R SS ++R+ L +
Sbjct: 18 VLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE 59
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics,
PSI-2, protein structure initiative; 1.40A {Lactococcus
lactis subsp}
Length = 219
Score = 30.7 bits (70), Expect = 0.37
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
K+ I G++ +G++L LS ++ AR + + N+ +
Sbjct: 2 KIF-IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFD-------VDWT 53
Query: 107 VTQTKYHRRCFDAVI 121
+ DA+I
Sbjct: 54 PEEMAKQLHGMDAII 68
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 31.0 bits (70), Expect = 0.47
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAK-LVLSARS 79
+K ITG G G LA L GA+ LVL++RS
Sbjct: 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRS 1918
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis,
malonyl/palmitoyl transferase, phosphopantetheine,
transferase; HET: GVL FMN; 3.10A {Saccharomyces
cerevisiae} PDB: 2vkz_A* 3hmj_A*
Length = 1887
Score = 30.7 bits (69), Expect = 0.53
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 27 CDLYLFFIEKINKRLNYFNNKVVWITGASSG-IGEALALQLSKCGAKLVL--SARSSSNL 83
L+L +EK F +K V ITGA G IG + L + GAK+V+ S S
Sbjct: 656 SSLFLDGLEKAAFNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT 715
Query: 84 ERVKNLCVQAGAH 96
+ +++ + GA
Sbjct: 716 DYYQSIYAKYGAK 728
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine
methyltransferase 4, APO catalytic domain, regulator,
mRNA processing; 2.55A {Rattus norvegicus}
Length = 480
Score = 30.5 bits (68), Expect = 0.59
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 30 YLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL 89
+ I + F +K+V G SGI L+ ++ GA+ + + +S+ + + L
Sbjct: 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGI---LSFFAAQAGARKIYAVEASTMAQHAEVL 199
Query: 90 CVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI 121
V++ I + V + + D +I
Sbjct: 200 -VKSNNLTDRIVVIPGKVEEVSLPEQ-VDIII 229
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl
reductase, ketoacyl synthase, ketoacyl reductase; 3.1A
{Thermomyces lanuginosus} PDB: 2uvb_A*
Length = 1878
Score = 30.7 bits (69), Expect = 0.60
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 27 CDLYLFFIEKINKRLNYFNNKVVWITGASSG-IGEALALQLSKCGAKLVLSARSSS 81
+YL +E + F K +TGA +G IG + L GAK++++ S
Sbjct: 633 TGIYLDGLEAAARSGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFS 688
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold,
structural genomics; HET: NAP F42; 1.65A {Archaeoglobus
fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Length = 212
Score = 29.8 bits (66), Expect = 0.63
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 51 ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ G + +G+ LAL+L+ G ++V+ +R E+ + +
Sbjct: 5 LLGGTGNLGKGLALRLATLGHEIVVGSR---REEKAEAKAAEYRRI 47
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification;
HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A*
3b3g_A 2v74_B* 2v7e_A
Length = 348
Score = 30.4 bits (68), Expect = 0.65
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 30 YLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL 89
+ I + F +K+V G SGI L+ ++ GA+ + + +S+ + + L
Sbjct: 35 TGTYQRAILQNHTDFKDKIVLDVGCGSGI---LSFFAAQAGARKIYAVEASTMAQHAEVL 91
Query: 90 CVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI 121
V++ I + V + + D +I
Sbjct: 92 -VKSNNLTDRIVVIPGKVEEVSLPEQ-VDIII 121
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics,
structural genomics consortium, SGC; HET: SAH; 2.00A
{Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Length = 340
Score = 30.0 bits (67), Expect = 0.80
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Query: 30 YLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL 89
+ + I + + F +KVV G +GI L++ +K GAK VL S L + ++
Sbjct: 49 TESYRDFIYQNPHIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDI 105
Query: 90 CVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
++ +I + + + D +I ++ +L + S A
Sbjct: 106 -IRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKN 158
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 30.0 bits (68), Expect = 0.90
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 48 VVWITGASSGIGEALALQLSKCGAK-LVLSARS 79
V +TG + G+G +A L++ GA L+L +RS
Sbjct: 228 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRS 260
Score = 27.0 bits (60), Expect = 7.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 242 HLVVTSSIAGIVGAPYSGSY 261
V+ SS A GAP G Y
Sbjct: 355 AFVLFSSFASAFGAPGLGGY 374
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 30.1 bits (68), Expect = 0.91
Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 8/68 (11%)
Query: 46 NKVVWITGASSGIGEALALQL-SKCGAK-LVLSARSSSNLERVKNL---CVQAGAHPQSI 100
V +TG + +G +A L + G + LVL +R L GA +
Sbjct: 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE---V 586
Query: 101 YTLTLDVT 108
DV
Sbjct: 587 SLQACDVA 594
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase,
oxidoreductase, SDR, cardenolides, cardiac glycosides;
HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Length = 364
Score = 29.7 bits (66), Expect = 1.0
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGA 71
+ V I G + IG +LA L
Sbjct: 1 SSVALIVGVTGIIGNSLAEILPLADT 26
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE NDP; 1.70A
{Ralstonia eutropha}
Length = 379
Score = 29.5 bits (66), Expect = 1.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ T A+S +G+ L K G KLV R + L GA
Sbjct: 173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQAD----LLKAQGAV 218
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding,
fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Length = 422
Score = 29.3 bits (65), Expect = 1.4
Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 11/112 (9%)
Query: 47 KVVWITGASSGIGEALALQLS-KCGAKLVLSARSSSNLER---------VKNLCVQAGAH 96
K V + GASSG G A + + GA + A A
Sbjct: 62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA 121
Query: 97 PQSIYTLTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIEL 147
++ D + + + + G +D+++ + R E+
Sbjct: 122 GLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEV 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine
methyltransferase, methylation; HET: SAH; 2.61A
{Arabidopsis thaliana}
Length = 376
Score = 29.4 bits (65), Expect = 1.4
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH 96
+ + ++F K V G SGI LA+ ++ GA+ V + ++ + + L V+A
Sbjct: 55 VFQNKHHFEGKTVLDVGTGSGI---LAIWSAQAGARKVYAVEATKMADHARAL-VKANNL 110
Query: 97 PQSIYTLTLDVTQTKYHRRC 116
+ + V +
Sbjct: 111 DHIVEVIEGSVEDISLPEKV 130
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces
nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Length = 496
Score = 29.3 bits (66), Expect = 1.5
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 49 VWITGASSGIGEALALQLSKCGAK-LVLSARS 79
V +TG + GIG +A +L++ GA LVL++R
Sbjct: 242 VLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR 273
Score = 27.0 bits (60), Expect = 6.9
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 242 HLVVTSSIAGIVGAPYSGSY 261
V+ SS A + G+ Y
Sbjct: 369 AFVLFSSGAAVWGSGGQPGY 388
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding,
cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C
Length = 326
Score = 28.6 bits (63), Expect = 1.8
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 12/84 (14%)
Query: 145 IELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 204
+ +E R F RP + L + T R + L +L + G + +A W
Sbjct: 225 VTVEPRRRKFH---RPIGLRIPLPPSWTDNPRDSGE---GDTTSLRLLCSVIGGTDQAQW 278
Query: 205 EDIELEVDREL------FELNVFS 222
EDI F NV +
Sbjct: 279 EDITGTTKLVYANECANFTTNVSA 302
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2;
short-chain dehydrogenase/reductase, rossman fold; 1.95A
{Streptomyces fradiae}
Length = 511
Score = 29.0 bits (65), Expect = 1.9
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 48 VVWITGASSGIGEALALQLSKCGAK-LVLSARS 79
V ITG IG LA +L+ GA+ LVL++R
Sbjct: 261 TVLITGGMGAIGRRLARRLAAEGAERLVLTSRR 293
Score = 27.1 bits (60), Expect = 6.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 242 HLVVTSSIAGIVGAPYSGSY 261
V+ SS+ G G G+Y
Sbjct: 385 AFVLFSSVTGTWGNAGQGAY 404
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2;
oxidoreductase, quinone oxidoreductase, medium-chain
dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens}
PDB: 2x1h_A* 2x7h_A* 2wek_A*
Length = 362
Score = 28.4 bits (64), Expect = 2.7
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 49 VWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNL 89
V +T A+ G G A+QLSK ++ + S +K+L
Sbjct: 167 VLVTAAAGGTG-QFAMQLSKKAKCHVIGTCSSDEKSAFLKSL 207
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A
{Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB:
1wvg_A*
Length = 357
Score = 28.3 bits (63), Expect = 3.0
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 42 NYFNNKVVWITGASSGIGEALALQLSKCGAK---LVLSARSSSNLERVKNL 89
+++ K V++TG + G L+L L GA L+A + +L +
Sbjct: 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV 55
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase,
epimerization, oxidoreductase; 1.88A {Streptomyces
venezuelae}
Length = 525
Score = 28.2 bits (63), Expect = 3.0
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 49 VWITGASSGIGEALALQLSKCGAK-LVLSARSS 80
V +TGA A +L++ GA L+L S
Sbjct: 254 VLVTGAEEPAAAEAARRLARDGAGHLLLHTTPS 286
Score = 28.2 bits (63), Expect = 3.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 235 LAREQGGHLVVTSSIAGIVGAPYSGSY 261
A + LV+ SS+A I G G+Y
Sbjct: 389 AAGGRPPVLVLFSSVAAIWGGAGQGAY 415
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann
fold, transport, cell cycle, transferrin, flavoprotein,
alternative splicing; HET: CIT; 2.0A {Homo sapiens}
PDB: 2vq3_A*
Length = 215
Score = 27.6 bits (61), Expect = 3.8
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 47 KVVWI-TGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH 96
KV + +G +LA +L G K+V+ +R+ R+ Q
Sbjct: 30 KVGILGSGD---FARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQ 77
>3dtt_A NADP oxidoreductase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Length = 245
Score = 27.7 bits (61), Expect = 3.9
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 52 TGASSGIGEALALQLSKCGAKLVLSARS 79
TG +G +A L+ G ++ + R
Sbjct: 27 TGT---VGRTMAGALADLGHEVTIGTRD 51
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm
2008} PDB: 3r14_A*
Length = 221
Score = 27.3 bits (60), Expect = 4.7
Identities = 9/79 (11%), Positives = 20/79 (25%), Gaps = 11/79 (13%)
Query: 47 KVVWITGASSGIGEALALQL-SKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
+ I GA+ I + L L + + L R + + + +
Sbjct: 7 YIT-ILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE------IIDHERVTVIEG 59
Query: 106 DVTQTKYHRRCF---DAVI 121
+ + V
Sbjct: 60 SFQNPGXLEQAVTNAEVVF 78
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET:
NAP; 2.20A {Rattus norvegicus}
Length = 201
Score = 26.9 bits (59), Expect = 5.4
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 58 IGEALALQLSKCGAKLVLSARS 79
G++L L++ +CG +V +R+
Sbjct: 30 FGKSLGLKMLQCGYSVVFGSRN 51
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium,
SGC, methyltransferase, LOC84291, transferase; HET: SAH;
1.30A {Homo sapiens}
Length = 215
Score = 26.9 bits (59), Expect = 5.5
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 156 YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 208
YA+ P + T+DV + + FD V+++ G LD L+ + E +
Sbjct: 85 YAHVPQLRWETMDVRKLDFPSASFDVVLEK-GTLDALLAGERDPWTVSSEGVH 136
Score = 26.9 bits (59), Expect = 6.7
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 57 GIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR 115
G L+ +L G V S SS + ++ AH + T+DV + +
Sbjct: 52 GNSA-LSYELFLGGFPNVTSVDYSSVVVAAMQACY----AHVPQLRWETMDVRKLDFPSA 106
Query: 116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
FD V+++ G LD L+ + E +
Sbjct: 107 SFDVVLEK-GTLDALLAGERDPWTVSSEGVH 136
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain
dehydrogenase reductase, oxidoreductase; HET: NMN AMP;
1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB:
1ujm_A* 1zze_A
Length = 342
Score = 26.9 bits (60), Expect = 7.3
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL 89
+V +TGA+ + + QL + G K+ +ARS+S L ++
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR 54
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural
genomics, PSI-2, protein structure initiative; HET: NDP;
1.78A {Lactobacillus casei atcc 334}
Length = 224
Score = 26.5 bits (58), Expect = 9.0
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 9/79 (11%)
Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
K+ + GA+ G A+ + + G +++ R V
Sbjct: 2 KIA-VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLV--------KEP 52
Query: 107 VTQTKYHRRCFDAVIQQFG 125
+ T+ DAV+
Sbjct: 53 LVLTEADLDSVDAVVDALS 71
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.325 0.139 0.413
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,033,628
Number of extensions: 235998
Number of successful extensions: 1342
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1011
Number of HSP's successfully gapped: 458
Length of query: 265
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 173
Effective length of database: 4,133,061
Effective search space: 715019553
Effective search space used: 715019553
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (25.1 bits)