Query psy9257
Match_columns 530
No_of_seqs 345 out of 2279
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 22:49:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9e_A Syntenin 1; cell adhesi 99.9 1E-24 3.4E-29 200.1 23.6 162 346-507 4-165 (166)
2 3pv2_A DEGQ; trypsin fold, PDZ 99.9 2.3E-24 8E-29 228.4 9.3 210 292-509 191-444 (451)
3 4a8c_A Periplasmic PH-dependen 99.9 1.8E-23 6.3E-28 220.2 14.9 210 292-509 173-421 (436)
4 3gsl_A Disks large homolog 4; 99.9 4.6E-22 1.6E-26 183.4 20.7 161 347-510 6-192 (196)
5 3r0h_A INAD, inactivation-NO-a 99.9 1.5E-21 5.2E-26 182.9 21.1 162 349-511 21-199 (206)
6 1p1d_A PDZ45, glutamate recept 99.9 3.5E-21 1.2E-25 180.6 20.1 162 347-508 7-195 (196)
7 2qt5_A Glutamate receptor-inte 99.9 1.2E-20 4.2E-25 176.9 21.5 161 346-508 7-195 (200)
8 3suz_A Amyloid beta A4 precurs 99.9 1.5E-22 5.1E-27 210.7 4.4 175 344-518 202-384 (388)
9 1ky9_A Protease DO, DEGP, HTRA 99.8 3.8E-23 1.3E-27 218.9 -6.0 210 292-509 196-441 (448)
10 2xkx_A Disks large homolog 4; 99.8 1.5E-18 5.2E-23 193.1 19.9 159 348-509 61-245 (721)
11 4fln_A Protease DO-like 2, chl 99.8 1.5E-19 5.1E-24 196.1 10.4 203 294-504 188-469 (539)
12 3rle_A Golgi reassembly-stacki 99.8 1.3E-17 4.3E-22 159.3 15.7 138 368-509 15-171 (209)
13 2xkx_A Disks large homolog 4; 99.7 5.8E-17 2E-21 180.4 21.7 163 349-514 157-398 (721)
14 3stj_A Protease DEGQ; serine p 99.5 1.8E-15 6E-20 155.3 4.9 141 292-438 173-331 (345)
15 1r6j_A Syntenin 1; PDZ, membra 99.5 1E-13 3.5E-18 115.8 11.2 78 430-507 4-81 (82)
16 2l97_A HTRA, putative serine p 99.4 3E-13 1E-17 121.1 10.3 101 336-439 2-125 (134)
17 3qo6_A Protease DO-like 1, chl 99.4 9.1E-14 3.1E-18 142.1 4.4 135 301-437 171-329 (348)
18 2eno_A Synaptojanin-2-binding 99.4 1.5E-12 5.2E-17 113.4 10.7 98 332-431 3-109 (120)
19 2eeh_A PDZ domain-containing p 99.4 2.4E-12 8.3E-17 108.6 11.3 87 343-431 7-96 (100)
20 1te0_A Protease DEGS; two doma 99.4 4.9E-13 1.7E-17 134.7 6.7 136 301-438 156-312 (318)
21 1y8t_A Hypothetical protein RV 99.4 5.4E-13 1.9E-17 134.4 6.7 135 301-437 160-310 (324)
22 1kwa_A Hcask/LIN-2 protein; PD 99.4 4E-12 1.4E-16 105.6 10.7 82 347-429 2-85 (88)
23 2iwo_A Multiple PDZ domain pro 99.3 2.7E-12 9.4E-17 112.8 10.0 91 344-435 22-119 (120)
24 2v90_A PDZ domain-containing p 99.3 4.5E-12 1.5E-16 105.8 10.8 87 346-434 3-94 (96)
25 3i4w_A Disks large homolog 4; 99.3 4.1E-12 1.4E-16 107.1 9.9 92 337-430 2-96 (104)
26 2he4_A Na(+)/H(+) exchange reg 99.3 1.2E-11 4E-16 102.2 11.9 83 346-430 4-88 (90)
27 1qau_A Neuronal nitric oxide s 99.3 1.3E-11 4.6E-16 105.7 12.5 89 349-437 4-95 (112)
28 1ihj_A INAD; intermolecular di 99.3 8.9E-12 3.1E-16 104.2 11.0 83 346-429 5-97 (98)
29 1g9o_A NHE-RF; PDZ domain, com 99.3 1.5E-11 5E-16 101.6 11.8 83 347-430 4-88 (91)
30 2jil_A GRIP1 protein, glutamat 99.3 1.1E-11 3.9E-16 103.4 10.9 82 349-432 6-95 (97)
31 2vz5_A TAX1-binding protein 3; 99.3 9.7E-12 3.3E-16 112.2 11.0 87 353-439 33-134 (139)
32 1wi2_A Riken cDNA 2700099C19; 99.3 1.6E-11 5.5E-16 104.4 11.8 83 346-430 15-100 (104)
33 2awx_A Synapse associated prot 99.3 1.6E-11 5.3E-16 104.5 11.5 90 346-437 3-101 (105)
34 1va8_A Maguk P55 subfamily mem 99.3 1.8E-11 6E-16 106.0 11.6 86 345-431 24-110 (113)
35 2opg_A Multiple PDZ domain pro 99.3 2.8E-11 9.5E-16 101.2 12.5 84 349-434 7-95 (98)
36 1x6d_A Interleukin-16; PDZ dom 99.3 1E-11 3.5E-16 107.9 10.0 92 346-437 15-111 (119)
37 2jik_A Synaptojanin-2 binding 99.3 2.2E-11 7.4E-16 102.6 11.7 84 345-430 6-98 (101)
38 2w4f_A Protein LAP4; structura 99.3 2.4E-11 8.3E-16 101.2 11.7 80 350-431 7-95 (97)
39 2o2t_A Multiple PDZ domain pro 99.3 4.8E-12 1.6E-16 109.5 7.6 88 346-434 20-115 (117)
40 2i1n_A Discs, large homolog 3; 99.3 1.9E-11 6.4E-16 103.1 11.0 85 347-433 5-98 (102)
41 1r6j_A Syntenin 1; PDZ, membra 99.3 1.4E-11 4.9E-16 102.9 9.8 76 347-427 5-80 (82)
42 2pa1_A PDZ and LIM domain prot 99.3 2.7E-11 9.3E-16 99.3 11.3 74 355-429 9-85 (87)
43 3sfj_A TAX1-binding protein 3; 99.3 1.8E-11 6.1E-16 103.4 10.4 82 347-428 5-104 (104)
44 2pkt_A PDZ and LIM domain prot 99.3 2.2E-11 7.7E-16 100.6 10.8 76 357-433 12-90 (91)
45 3cbz_A Dishevelled-2; PDZ doma 99.3 1.1E-11 3.9E-16 106.5 9.1 83 347-429 6-96 (108)
46 1n7e_A AMPA receptor interacti 99.3 3.6E-11 1.2E-15 100.6 11.8 82 348-431 7-92 (97)
47 2d92_A INAD-like protein; PDZ 99.3 2.1E-11 7.1E-16 104.5 10.5 85 344-429 13-105 (108)
48 3l4f_D SH3 and multiple ankyri 99.3 2.3E-11 7.9E-16 108.7 11.2 84 345-429 26-124 (132)
49 1q3o_A Shank1; PDZ, GKAP, pept 99.3 3.7E-11 1.3E-15 102.8 11.8 80 348-428 9-103 (109)
50 1m5z_A GRIP, AMPA receptor int 99.3 4.4E-11 1.5E-15 98.7 11.8 81 347-428 7-90 (91)
51 2f5y_A Regulator of G-protein 99.3 3.5E-11 1.2E-15 99.8 11.1 81 347-430 4-84 (91)
52 2fcf_A Multiple PDZ domain pro 99.3 3.9E-11 1.3E-15 101.1 11.5 82 348-430 6-100 (103)
53 1x5q_A LAP4 protein; PDZ domai 99.3 4.5E-11 1.5E-15 102.3 12.0 82 349-432 18-108 (110)
54 3o46_A Maguk P55 subfamily mem 99.3 4.2E-11 1.4E-15 99.5 11.5 83 345-429 3-88 (93)
55 1qav_A Alpha-1 syntrophin (res 99.3 4.3E-11 1.5E-15 98.7 11.4 80 347-427 5-88 (90)
56 3nfk_A Tyrosine-protein phosph 99.3 3E-11 1E-15 102.7 10.7 86 343-428 14-107 (107)
57 1ujd_A KIAA0559 protein; PDZ d 99.2 2.7E-11 9.1E-16 105.4 10.5 84 347-431 13-111 (117)
58 2e7k_A Maguk P55 subfamily mem 99.2 2.5E-11 8.5E-16 101.4 9.9 82 345-428 5-87 (91)
59 2q3g_A PDZ and LIM domain prot 99.2 3.9E-11 1.3E-15 98.8 10.9 74 356-430 11-87 (89)
60 3r68_A Na(+)/H(+) exchange reg 99.2 2.7E-11 9.3E-16 100.5 9.8 81 347-429 6-88 (95)
61 2qg1_A Multiple PDZ domain pro 99.2 5.3E-11 1.8E-15 98.4 11.4 82 347-429 5-89 (92)
62 2fe5_A Presynaptic protein SAP 99.2 5.6E-11 1.9E-15 98.4 11.6 81 347-429 4-93 (94)
63 2vwr_A Ligand of NUMB protein 99.2 6E-11 2.1E-15 98.8 11.8 82 348-430 5-90 (95)
64 2byg_A Channel associated prot 99.2 3.6E-11 1.2E-15 105.0 10.9 82 346-429 24-114 (117)
65 2ego_A General receptor for ph 99.2 5.6E-11 1.9E-15 99.5 11.6 81 347-428 5-95 (96)
66 2g5m_B Neurabin-2; spinophilin 99.2 1.8E-11 6.2E-16 105.2 8.8 88 349-438 7-104 (113)
67 1um1_A KIAA1849 protein, RSGI 99.2 2.2E-11 7.5E-16 104.2 9.3 90 348-439 10-106 (110)
68 2fne_A Multiple PDZ domain pro 99.2 3.9E-11 1.3E-15 105.0 10.9 84 346-431 25-115 (117)
69 1b8q_A Protein (neuronal nitri 99.2 1.4E-11 4.8E-16 108.2 7.9 94 345-438 7-103 (127)
70 2i04_A Membrane-associated gua 99.2 8E-11 2.7E-15 95.9 11.8 78 349-427 3-85 (85)
71 3b76_A E3 ubiquitin-protein li 99.2 4.5E-11 1.5E-15 105.1 10.9 81 347-428 25-112 (118)
72 2ejy_A 55 kDa erythrocyte memb 99.2 4E-11 1.4E-15 102.5 10.3 83 345-428 11-95 (97)
73 2jxo_A Ezrin-radixin-moesin-bi 99.2 2.5E-11 8.5E-16 101.7 8.9 82 348-430 11-94 (98)
74 2yt7_A Amyloid beta A4 precurs 99.2 5.9E-11 2E-15 100.5 11.1 84 345-428 8-98 (101)
75 2jre_A C60-1 PDZ domain peptid 99.2 4.3E-11 1.5E-15 101.9 10.3 82 349-431 15-106 (108)
76 1v5q_A GRIP1 homolog, glutamat 99.2 3.6E-11 1.2E-15 105.3 10.0 88 344-431 13-109 (122)
77 1lcy_A HTRA2 serine protease; 99.2 7.8E-12 2.7E-16 126.6 6.6 129 301-438 164-321 (325)
78 2dmz_A INAD-like protein; PDZ 99.2 3.2E-11 1.1E-15 106.2 9.6 86 347-433 16-110 (129)
79 2r4h_A Membrane-associated gua 99.2 7.1E-11 2.4E-15 102.0 11.6 82 347-430 25-110 (112)
80 2cs5_A Tyrosine-protein phosph 99.2 2E-11 7E-16 106.0 8.2 90 343-432 12-109 (119)
81 1d5g_A Human phosphatase HPTP1 99.2 9.7E-11 3.3E-15 97.5 11.8 80 348-429 7-93 (96)
82 1v62_A KIAA1719 protein; struc 99.2 6.4E-11 2.2E-15 103.2 10.9 86 345-431 14-104 (117)
83 3ngh_A PDZ domain-containing p 99.2 4.1E-11 1.4E-15 101.7 9.4 85 347-432 2-88 (106)
84 3qe1_A Sorting nexin-27, G pro 99.2 9.3E-11 3.2E-15 99.7 11.6 83 347-431 7-104 (107)
85 2vsp_A PDZ domain-containing p 99.2 1.3E-11 4.4E-16 102.2 6.1 83 347-431 4-88 (91)
86 2uzc_A Human pdlim5, PDZ and L 99.2 1.2E-10 4.2E-15 95.4 11.9 72 357-429 12-86 (88)
87 2h2b_A Tight junction protein 99.2 6.2E-11 2.1E-15 100.7 10.4 83 347-431 8-99 (107)
88 1i16_A Interleukin 16, LCF; cy 99.2 1.5E-11 5E-16 109.3 6.7 86 344-430 27-119 (130)
89 2csj_A TJP2 protein; PDZ domai 99.2 3E-11 1E-15 104.8 8.5 85 346-432 14-107 (117)
90 2dlu_A INAD-like protein; PDZ 99.2 4.7E-11 1.6E-15 102.3 9.5 83 347-431 16-100 (111)
91 2dls_A PDZ-rhogef, RHO guanine 99.2 7.4E-11 2.5E-15 98.4 10.5 79 347-429 9-87 (93)
92 2dc2_A GOPC, golgi associated 99.2 9.8E-11 3.3E-15 99.7 11.2 82 347-429 10-95 (103)
93 2djt_A Unnamed protein product 99.2 7.9E-11 2.7E-15 99.6 10.6 81 348-430 13-99 (104)
94 2koj_A Partitioning defective 99.2 1.6E-10 5.4E-15 98.8 12.3 81 350-431 15-103 (111)
95 2dkr_A LIN-7 homolog B; LIN-7B 99.2 1.1E-10 3.7E-15 96.5 10.9 82 346-429 5-90 (93)
96 3axa_A Afadin, nectin-3, prote 99.2 1.2E-10 4.2E-15 98.9 11.4 81 348-431 13-100 (106)
97 2iwq_A Multiple PDZ domain pro 99.2 1.2E-10 4E-15 102.9 11.7 82 348-430 26-120 (123)
98 1uit_A Human discs large 5 pro 99.2 9.9E-11 3.4E-15 101.3 10.9 88 349-438 22-110 (117)
99 2d90_A PDZ domain containing p 99.2 6.4E-11 2.2E-15 100.0 9.4 83 346-430 6-90 (102)
100 2kjd_A Sodium/hydrogen exchang 99.2 2.2E-11 7.5E-16 106.7 6.8 92 347-439 10-105 (128)
101 2edz_A PDZ domain-containing p 99.2 1.9E-11 6.6E-16 105.5 6.3 88 349-437 16-105 (114)
102 1wfg_A Regulating synaptic mem 99.2 5.2E-11 1.8E-15 106.1 9.3 87 343-429 33-127 (131)
103 1wf8_A Neurabin-I; PDZ domain, 99.2 8.4E-11 2.9E-15 100.3 10.1 79 349-429 12-100 (107)
104 2eaq_A LIM domain only protein 99.2 7.8E-11 2.7E-15 97.0 9.5 75 355-429 14-89 (90)
105 1nf3_C PAR-6B; semi-CRIB motif 99.2 1.2E-10 4E-15 103.0 11.3 87 343-430 26-126 (128)
106 4e34_A Golgi-associated PDZ an 99.2 1.4E-10 4.8E-15 94.9 10.8 80 347-427 3-86 (87)
107 1wi4_A Synip, syntaxin binding 99.2 9.4E-11 3.2E-15 101.2 10.2 82 346-429 15-105 (109)
108 2q9v_A Membrane-associated gua 99.2 8.4E-11 2.9E-15 96.8 9.5 80 348-428 4-88 (90)
109 1uep_A Membrane associated gua 99.2 3.4E-11 1.2E-15 102.2 7.3 81 348-429 11-96 (103)
110 2db5_A INAD-like protein; PDZ 99.2 5.9E-11 2E-15 104.5 9.0 85 346-431 25-117 (128)
111 2ehr_A INAD-like protein; PDZ 99.2 8.1E-11 2.8E-15 101.9 9.6 83 346-429 15-110 (117)
112 1vb7_A PDZ and LIM domain 2; P 99.2 4.3E-11 1.5E-15 99.8 7.6 81 350-431 8-91 (94)
113 1ueq_A Membrane associated gua 99.2 1.7E-10 6E-15 101.1 11.8 83 346-429 19-106 (123)
114 3khf_A Microtubule-associated 99.2 9.7E-11 3.3E-15 98.2 9.7 79 350-430 6-94 (99)
115 1uhp_A Hypothetical protein KI 99.2 1.6E-10 5.3E-15 98.6 11.2 82 346-429 8-101 (107)
116 2qkv_A Inactivation-NO-after-p 99.2 1.4E-10 4.7E-15 97.5 10.6 79 349-428 11-90 (96)
117 4amh_A Disks large homolog 1; 99.2 2.4E-10 8.3E-15 97.9 12.1 83 355-438 10-104 (106)
118 3hpk_A Protein interacting wit 99.2 1.8E-10 6E-15 101.0 11.4 80 347-427 20-103 (125)
119 3bpu_A Membrane-associated gua 99.2 1.3E-10 4.5E-15 95.4 9.9 80 347-429 4-86 (88)
120 2vsv_A Rhophilin-2; scaffold p 99.2 1.7E-10 5.9E-15 100.5 11.2 82 345-428 22-103 (109)
121 1tp5_A Presynaptic density pro 99.2 2.1E-10 7.2E-15 99.4 11.5 84 344-429 12-98 (119)
122 1wf7_A Enigma homologue protei 99.2 6.5E-11 2.2E-15 100.3 8.1 81 357-438 14-97 (103)
123 2kom_A Partitioning defective 99.2 2.7E-10 9.3E-15 99.9 12.2 74 356-429 39-120 (121)
124 2iwn_A Multiple PDZ domain pro 99.1 2.2E-10 7.4E-15 94.8 10.7 78 350-429 8-93 (97)
125 2kpk_A Membrane-associated gua 99.1 1.9E-10 6.6E-15 101.8 11.0 80 349-429 21-105 (129)
126 2daz_A INAD-like protein; PDZ 99.1 1.2E-10 4.1E-15 102.1 9.2 87 343-431 22-113 (124)
127 1wg6_A Hypothetical protein (r 99.1 6.7E-11 2.3E-15 104.7 7.7 82 349-430 28-123 (127)
128 1uf1_A KIAA1526 protein; PDZ d 99.1 1.5E-10 5.3E-15 101.8 9.7 96 416-512 6-108 (128)
129 1uju_A Scribble; PDZ domain, c 99.1 4.1E-11 1.4E-15 102.9 5.7 84 345-429 8-104 (111)
130 3cyy_A Tight junction protein 99.1 3.8E-10 1.3E-14 92.9 11.3 78 355-436 12-90 (92)
131 2eei_A PDZ domain-containing p 99.1 8.3E-11 2.9E-15 99.8 7.4 85 345-431 7-93 (106)
132 1x5n_A Harmonin; PDZ domain, u 99.1 1.4E-10 4.7E-15 99.8 8.9 89 348-438 17-109 (114)
133 3tsv_A Tight junction protein 99.1 1.9E-10 6.7E-15 101.6 10.0 76 357-432 38-115 (124)
134 1q7x_A PDZ2B domain of PTP-BAS 99.1 1.3E-10 4.4E-15 99.1 8.6 82 348-431 11-104 (108)
135 3num_A Serine protease HTRA1; 99.1 2.3E-12 7.8E-17 130.6 -2.7 130 301-439 163-320 (332)
136 2la8_A Inactivation-NO-after-p 99.1 1.5E-10 5.3E-15 99.6 9.1 79 349-428 5-84 (106)
137 2gzv_A PRKCA-binding protein; 99.1 3.7E-10 1.2E-14 98.4 11.4 81 347-428 25-109 (114)
138 2kv8_A RGS12, regulator of G-p 99.1 4.9E-11 1.7E-15 97.0 5.5 79 347-428 3-81 (83)
139 2dm8_A INAD-like protein; PDZ 99.1 1E-10 3.5E-15 100.7 7.8 84 348-433 19-107 (116)
140 3egg_C Spinophilin; PP1, serin 99.1 3E-10 1E-14 106.2 11.5 78 349-428 83-170 (170)
141 3k1r_A Harmonin; protein-prote 99.1 2.3E-10 7.9E-15 107.5 10.7 84 345-430 83-169 (192)
142 2qg1_A Multiple PDZ domain pro 99.1 5.4E-10 1.8E-14 92.3 11.7 79 430-508 4-89 (92)
143 1ujv_A Membrane associated gua 99.1 4.4E-10 1.5E-14 94.7 11.4 79 349-430 13-92 (96)
144 1uew_A Membrane associated gua 99.1 2.6E-10 8.8E-15 98.4 10.1 84 347-431 11-105 (114)
145 1wha_A KIAA0147 protein, scrib 99.1 1.6E-10 5.4E-15 98.2 8.3 79 349-429 10-98 (105)
146 2pzd_A Serine protease HTRA2; 99.1 2.5E-10 8.4E-15 98.1 9.6 81 355-439 3-101 (113)
147 2ego_A General receptor for ph 99.1 5.5E-10 1.9E-14 93.4 11.4 78 430-507 4-95 (96)
148 3b76_A E3 ubiquitin-protein li 99.1 2.5E-10 8.6E-15 100.4 9.7 82 429-510 23-115 (118)
149 1wh1_A KIAA1095 protein; PDZ d 99.1 1.3E-10 4.4E-15 102.1 7.8 87 350-438 23-116 (124)
150 1rgw_A ZAsp protein; PDZ, cyph 99.1 3.5E-10 1.2E-14 91.9 9.7 72 357-429 10-84 (85)
151 3soe_A Membrane-associated gua 99.1 5.4E-10 1.9E-14 98.7 11.6 84 346-432 12-96 (113)
152 1uez_A KIAA1526 protein; PDZ d 99.1 2.1E-10 7.2E-15 96.6 8.6 82 347-430 9-94 (101)
153 1ufx_A KIAA1526 protein; PDZ d 99.1 2.6E-10 9E-15 97.6 9.2 82 347-429 7-97 (103)
154 2eeg_A PDZ and LIM domain prot 99.1 2.4E-10 8.3E-15 95.3 8.7 72 358-430 18-92 (94)
155 2z17_A Pleckstrin homology SEC 99.1 2.9E-10 1E-14 96.4 9.3 78 347-425 16-103 (104)
156 2dc2_A GOPC, golgi associated 99.1 5.1E-10 1.7E-14 95.3 10.7 84 430-513 9-100 (103)
157 1uf1_A KIAA1526 protein; PDZ d 99.1 5.3E-10 1.8E-14 98.4 10.9 88 350-439 24-114 (128)
158 1mfg_A ERB-B2 interacting prot 99.1 5E-10 1.7E-14 93.2 10.2 76 350-429 7-93 (95)
159 1um7_A Synapse-associated prot 99.1 8.9E-11 3E-15 100.3 5.6 86 343-430 12-100 (113)
160 1qav_A Alpha-1 syntrophin (res 99.1 7.9E-10 2.7E-14 91.1 11.0 78 430-507 4-89 (90)
161 2he4_A Na(+)/H(+) exchange reg 99.1 6.6E-10 2.2E-14 91.6 10.5 79 429-508 3-87 (90)
162 4e34_A Golgi-associated PDZ an 99.1 7.6E-10 2.6E-14 90.5 10.7 77 430-506 2-86 (87)
163 2vsp_A PDZ domain-containing p 99.1 3E-10 1E-14 94.0 8.3 82 430-512 3-90 (91)
164 2v90_A PDZ domain-containing p 99.1 5.6E-10 1.9E-14 93.0 10.0 82 430-512 3-93 (96)
165 1v5l_A PDZ and LIM domain 3; a 99.1 4.6E-11 1.6E-15 101.4 3.4 78 356-434 13-93 (103)
166 1wfv_A Membrane associated gua 99.1 1.1E-10 3.7E-15 98.2 5.7 80 350-431 15-98 (103)
167 1g9o_A NHE-RF; PDZ domain, com 99.1 1E-09 3.6E-14 90.4 11.1 80 430-510 3-88 (91)
168 2f5y_A Regulator of G-protein 99.1 1.1E-09 3.9E-14 90.7 11.2 77 431-508 4-83 (91)
169 2rcz_A Tight junction protein 99.1 1.2E-09 4E-14 87.4 10.9 72 353-428 8-80 (81)
170 1q3o_A Shank1; PDZ, GKAP, pept 99.1 1.1E-09 3.9E-14 93.5 11.5 79 430-508 7-104 (109)
171 2yub_A LIMK-2, LIM domain kina 99.1 3E-10 1E-14 100.0 7.9 81 355-436 24-112 (118)
172 1z87_A Alpha-1-syntrophin; pro 99.0 2.4E-10 8.1E-15 114.1 8.1 86 344-430 75-164 (263)
173 1m5z_A GRIP, AMPA receptor int 99.0 1.5E-09 5E-14 89.5 11.5 78 430-507 6-90 (91)
174 2iwo_A Multiple PDZ domain pro 99.0 6.9E-10 2.4E-14 97.4 10.1 81 429-509 23-114 (120)
175 3kzd_A TIAM-1, T-lymphoma inva 99.0 1E-09 3.6E-14 93.9 10.8 79 347-428 7-91 (94)
176 3qe1_A Sorting nexin-27, G pro 99.0 1.1E-09 3.9E-14 92.9 10.8 79 430-509 6-103 (107)
177 1y7n_A Amyloid beta A4 precurs 99.0 1.5E-09 5E-14 91.0 11.3 70 438-507 20-89 (90)
178 2yuy_A RHO GTPase activating p 99.0 9.8E-11 3.3E-15 103.1 4.3 61 369-430 61-121 (126)
179 1n7t_A 99-MER peptide of densi 99.0 3.9E-10 1.4E-14 95.3 7.9 76 349-428 14-100 (103)
180 3e17_A Tight junction protein 99.0 1.5E-09 5.2E-14 90.0 11.2 71 355-429 10-81 (88)
181 3ngh_A PDZ domain-containing p 99.0 8.6E-10 3E-14 93.5 9.7 83 432-514 3-91 (106)
182 3gge_A PDZ domain-containing p 99.0 1.8E-09 6.2E-14 92.9 11.7 81 347-428 6-89 (95)
183 3l4f_D SH3 and multiple ankyri 99.0 9.1E-10 3.1E-14 98.3 10.2 80 429-508 26-124 (132)
184 1d5g_A Human phosphatase HPTP1 99.0 2.2E-09 7.6E-14 89.2 11.9 79 429-508 4-93 (96)
185 1kwa_A Hcask/LIN-2 protein; PD 99.0 1.5E-09 5.3E-14 89.9 10.6 77 432-508 3-85 (88)
186 2pa1_A PDZ and LIM domain prot 99.0 1.5E-09 5.2E-14 88.9 10.4 75 434-508 4-85 (87)
187 2awx_A Synapse associated prot 99.0 1.6E-09 5.6E-14 91.9 10.9 80 430-510 3-95 (105)
188 3r68_A Na(+)/H(+) exchange reg 99.0 9.6E-10 3.3E-14 91.1 9.2 82 430-512 5-92 (95)
189 3i4w_A Disks large homolog 4; 99.0 1.5E-09 5.3E-14 91.3 10.6 78 430-508 11-95 (104)
190 2jik_A Synaptojanin-2 binding 99.0 1.7E-09 5.8E-14 90.9 10.8 78 430-508 7-97 (101)
191 1v6b_A Harmonin isoform A1; st 99.0 8.1E-10 2.8E-14 96.4 9.1 81 346-428 18-106 (118)
192 1ihj_A INAD; intermolecular di 99.0 2.1E-09 7.3E-14 89.7 11.2 78 431-508 6-97 (98)
193 2edp_A Fragment, shroom family 99.0 5.3E-10 1.8E-14 94.5 7.6 80 349-430 12-95 (100)
194 2opg_A Multiple PDZ domain pro 99.0 1.7E-09 5.9E-14 90.2 10.6 80 429-509 3-91 (98)
195 3qik_A Phosphatidylinositol 3, 99.0 1.3E-09 4.6E-14 94.8 10.1 77 352-428 22-100 (101)
196 3e17_A Tight junction protein 99.0 1.6E-09 5.6E-14 89.7 10.2 71 440-510 11-83 (88)
197 2qbw_A PDZ-fibronectin fusion 99.0 1.7E-09 5.7E-14 100.4 11.3 77 358-436 2-92 (195)
198 2fe5_A Presynaptic protein SAP 99.0 2.5E-09 8.7E-14 88.4 11.2 76 431-507 4-92 (94)
199 2d8i_A T-cell lymphoma invasio 99.0 4.4E-10 1.5E-14 98.6 6.9 82 346-430 15-102 (114)
200 2p3w_A Probable serine proteas 99.0 8.3E-10 2.8E-14 94.8 8.5 80 355-438 3-100 (112)
201 2jil_A GRIP1 protein, glutamat 99.0 1.7E-09 5.9E-14 90.1 10.0 77 431-508 4-92 (97)
202 1wif_A RSGI RUH-020, riken cDN 99.0 3.1E-10 1.1E-14 101.6 5.9 79 349-428 30-110 (126)
203 2vwr_A Ligand of NUMB protein 99.0 2.4E-09 8.1E-14 89.1 10.8 78 431-508 4-89 (95)
204 1uew_A Membrane associated gua 99.0 1.4E-09 4.7E-14 93.9 9.6 80 430-509 10-104 (114)
205 1whd_A RGS3, regulator of G-pr 99.0 4.6E-10 1.6E-14 94.9 6.4 77 350-429 19-95 (100)
206 1q7x_A PDZ2B domain of PTP-BAS 99.0 2E-09 6.8E-14 91.7 10.5 80 429-509 8-103 (108)
207 2fne_A Multiple PDZ domain pro 99.0 1.7E-09 5.8E-14 94.5 10.2 82 426-508 21-113 (117)
208 2kv8_A RGS12, regulator of G-p 99.0 6.2E-10 2.1E-14 90.4 6.9 77 430-507 2-81 (83)
209 1um1_A KIAA1849 protein, RSGI 99.0 2.8E-09 9.6E-14 91.0 11.3 82 429-511 7-99 (110)
210 2q9v_A Membrane-associated gua 99.0 1.3E-09 4.5E-14 89.6 8.9 78 430-508 2-89 (90)
211 1wi2_A Riken cDNA 2700099C19; 99.0 2.2E-09 7.5E-14 91.2 10.5 78 430-508 15-99 (104)
212 2uzc_A Human pdlim5, PDZ and L 99.0 2.8E-09 9.6E-14 87.3 10.8 75 432-508 5-86 (88)
213 2i1n_A Discs, large homolog 3; 99.0 2.3E-09 7.8E-14 90.3 10.5 78 431-509 5-95 (102)
214 3hpk_A Protein interacting wit 99.0 2.7E-09 9.3E-14 93.4 11.2 77 431-507 20-104 (125)
215 1y7n_A Amyloid beta A4 precurs 99.0 3E-09 1E-13 89.2 10.9 71 353-428 19-89 (90)
216 2dkr_A LIN-7 homolog B; LIN-7B 99.0 2.7E-09 9.2E-14 88.1 10.5 78 430-508 5-90 (93)
217 2r4h_A Membrane-associated gua 99.0 3.1E-09 1.1E-13 91.6 11.3 79 429-508 23-109 (112)
218 2i04_A Membrane-associated gua 99.0 3.1E-09 1.1E-13 86.5 10.7 73 433-506 3-85 (85)
219 1n7e_A AMPA receptor interacti 99.0 4.1E-09 1.4E-13 88.1 11.7 79 430-509 5-91 (97)
220 3nfk_A Tyrosine-protein phosph 99.0 2E-09 6.7E-14 91.4 9.8 78 430-507 17-107 (107)
221 1uhp_A Hypothetical protein KI 99.0 3.4E-09 1.2E-13 90.3 11.2 78 430-508 8-101 (107)
222 2ejy_A 55 kDa erythrocyte memb 99.0 2.1E-09 7.1E-14 91.8 9.8 77 431-507 13-95 (97)
223 2q3g_A PDZ and LIM domain prot 99.0 2.3E-09 7.9E-14 88.1 9.7 75 432-508 5-86 (89)
224 1vae_A Rhophilin 2, rhophilin, 99.0 5.5E-10 1.9E-14 97.2 6.2 80 347-428 16-95 (111)
225 2byg_A Channel associated prot 99.0 2.9E-09 1E-13 92.9 10.8 78 430-508 24-114 (117)
226 3gge_A PDZ domain-containing p 99.0 4.1E-09 1.4E-13 90.7 11.5 79 428-507 3-89 (95)
227 2cs5_A Tyrosine-protein phosph 99.0 6.8E-10 2.3E-14 96.3 6.7 85 428-512 13-110 (119)
228 3o46_A Maguk P55 subfamily mem 99.0 3.2E-09 1.1E-13 88.1 10.4 78 431-509 5-89 (93)
229 3khf_A Microtubule-associated 99.0 3E-09 1E-13 89.1 10.3 75 433-508 5-93 (99)
230 2db5_A INAD-like protein; PDZ 99.0 1.7E-09 5.9E-14 95.1 9.2 80 430-509 25-116 (128)
231 2edv_A FERM and PDZ domain-con 99.0 4E-10 1.4E-14 94.8 4.9 79 348-429 10-89 (96)
232 2o2t_A Multiple PDZ domain pro 99.0 2.2E-09 7.6E-14 92.6 9.6 81 430-510 20-112 (117)
233 3tsz_A Tight junction protein 99.0 1.8E-09 6.1E-14 112.8 10.7 84 346-431 9-94 (391)
234 1ueq_A Membrane associated gua 99.0 5.1E-09 1.8E-13 91.7 12.0 78 430-508 19-106 (123)
235 2la8_A Inactivation-NO-after-p 99.0 1.2E-09 4E-14 94.1 7.5 81 431-511 3-88 (106)
236 2w4f_A Protein LAP4; structura 98.9 5.2E-09 1.8E-13 87.0 11.2 77 431-508 4-93 (97)
237 1uep_A Membrane associated gua 98.9 1.7E-09 5.8E-14 91.7 8.3 77 431-508 10-96 (103)
238 3cbz_A Dishevelled-2; PDZ doma 98.9 1.1E-09 3.8E-14 94.0 7.2 81 430-510 5-98 (108)
239 3shw_A Tight junction protein 98.9 1.6E-09 5.4E-14 116.1 9.8 83 347-431 2-86 (468)
240 2eno_A Synaptojanin-2-binding 98.9 4.3E-09 1.5E-13 91.5 10.7 79 430-509 17-108 (120)
241 2ehr_A INAD-like protein; PDZ 98.9 2.2E-09 7.4E-14 92.9 8.7 80 430-509 15-111 (117)
242 2d90_A PDZ domain containing p 98.9 1.8E-09 6E-14 91.1 8.0 80 430-510 6-91 (102)
243 1rgw_A ZAsp protein; PDZ, cyph 98.9 3.9E-09 1.3E-13 85.7 9.7 75 432-508 3-84 (85)
244 2eei_A PDZ domain-containing p 98.9 1.4E-09 4.9E-14 92.1 7.4 83 430-513 8-96 (106)
245 1wf8_A Neurabin-I; PDZ domain, 98.9 3.2E-09 1.1E-13 90.5 9.5 77 431-508 10-100 (107)
246 2pkt_A PDZ and LIM domain prot 98.9 3.8E-09 1.3E-13 87.1 9.7 76 432-509 5-87 (91)
247 2dls_A PDZ-rhogef, RHO guanine 98.9 4.5E-09 1.5E-13 87.5 10.1 77 430-508 8-87 (93)
248 2dlu_A INAD-like protein; PDZ 98.9 3.6E-09 1.2E-13 90.5 9.6 80 430-510 15-100 (111)
249 2kpk_A Membrane-associated gua 98.9 4.6E-09 1.6E-13 92.9 10.5 78 430-508 18-105 (129)
250 1v62_A KIAA1719 protein; struc 98.9 2.7E-09 9.1E-14 92.9 8.8 81 430-510 15-104 (117)
251 1va8_A Maguk P55 subfamily mem 98.9 5.2E-09 1.8E-13 90.4 10.6 79 430-508 25-108 (113)
252 1v5q_A GRIP1 homolog, glutamat 98.9 3.1E-09 1.1E-13 93.0 9.2 80 430-509 15-108 (122)
253 3i18_A LMO2051 protein; alpha- 98.9 3E-09 1E-13 90.2 8.7 78 368-448 6-89 (100)
254 2djt_A Unnamed protein product 98.9 5.6E-09 1.9E-13 88.2 10.3 78 430-508 11-98 (104)
255 1x5q_A LAP4 protein; PDZ domai 98.9 8.2E-09 2.8E-13 88.1 11.5 78 430-508 15-105 (110)
256 1uju_A Scribble; PDZ domain, c 98.9 1E-09 3.5E-14 94.1 5.7 79 430-508 9-104 (111)
257 1wfg_A Regulating synaptic mem 98.9 5.7E-09 2E-13 92.9 10.6 75 434-508 40-127 (131)
258 2gzv_A PRKCA-binding protein; 98.9 9.3E-09 3.2E-13 89.4 11.6 81 429-509 23-111 (114)
259 3r0h_A INAD, inactivation-NO-a 98.9 5.3E-09 1.8E-13 97.7 10.8 78 350-428 117-195 (206)
260 1wha_A KIAA0147 protein, scrib 98.9 3.5E-09 1.2E-13 89.9 8.7 78 430-508 7-98 (105)
261 2eeh_A PDZ domain-containing p 98.9 6.3E-09 2.2E-13 87.6 10.2 79 430-509 10-95 (100)
262 2qkv_A Inactivation-NO-after-p 98.9 5.6E-09 1.9E-13 87.6 9.8 79 430-508 8-91 (96)
263 3axa_A Afadin, nectin-3, prote 98.9 8.5E-09 2.9E-13 87.5 11.0 77 430-508 11-98 (106)
264 2fcf_A Multiple PDZ domain pro 98.9 6.6E-09 2.3E-13 87.4 10.2 78 431-508 5-99 (103)
265 2jre_A C60-1 PDZ domain peptid 98.9 6.6E-09 2.3E-13 88.3 10.3 79 430-508 12-104 (108)
266 2vsv_A Rhophilin-2; scaffold p 98.9 5.6E-09 1.9E-13 90.9 9.9 76 432-508 25-104 (109)
267 2lob_A Golgi-associated PDZ an 98.4 1.6E-10 5.4E-15 100.6 0.0 81 345-426 26-110 (112)
268 2krg_A Na(+)/H(+) exchange reg 98.9 5.6E-10 1.9E-14 108.2 3.8 89 347-437 10-103 (216)
269 1mfg_A ERB-B2 interacting prot 98.9 6.3E-09 2.1E-13 86.5 9.7 74 431-507 4-92 (95)
270 1wf7_A Enigma homologue protei 98.9 3.1E-09 1.1E-13 89.9 7.9 78 430-509 5-89 (103)
271 2edz_A PDZ domain-containing p 98.9 3.5E-09 1.2E-13 91.3 8.2 83 431-513 14-102 (114)
272 2daz_A INAD-like protein; PDZ 98.9 7.8E-09 2.7E-13 90.5 10.5 77 432-509 27-112 (124)
273 1ujd_A KIAA0559 protein; PDZ d 98.9 5.6E-09 1.9E-13 90.7 9.5 68 441-508 29-109 (117)
274 2z17_A Pleckstrin homology SEC 98.9 4.1E-09 1.4E-13 89.3 8.3 76 429-504 14-103 (104)
275 2d92_A INAD-like protein; PDZ 98.9 8.8E-09 3E-13 88.1 10.4 78 430-508 15-105 (108)
276 3gsl_A Disks large homolog 4; 98.9 9.4E-09 3.2E-13 94.3 11.2 83 349-433 103-194 (196)
277 2i6v_A General secretion pathw 98.9 4.5E-09 1.5E-13 86.8 8.1 75 360-436 7-85 (87)
278 1nf3_C PAR-6B; semi-CRIB motif 98.9 8.1E-09 2.8E-13 91.2 10.3 80 429-508 28-125 (128)
279 4amh_A Disks large homolog 1; 98.9 6.5E-09 2.2E-13 89.0 9.3 72 438-509 9-93 (106)
280 1whd_A RGS3, regulator of G-pr 98.9 5.5E-09 1.9E-13 88.2 8.7 78 430-508 15-95 (100)
281 2eeg_A PDZ and LIM domain prot 98.9 6.4E-09 2.2E-13 86.6 9.0 76 431-508 9-91 (94)
282 2csj_A TJP2 protein; PDZ domai 98.9 4.7E-09 1.6E-13 90.9 8.3 79 430-509 14-105 (117)
283 2g5m_B Neurabin-2; spinophilin 98.9 4.5E-09 1.5E-13 90.2 8.1 79 431-510 5-97 (113)
284 3egg_C Spinophilin; PP1, serin 98.9 8.1E-09 2.8E-13 96.5 10.4 75 432-507 82-170 (170)
285 2koj_A Partitioning defective 98.9 1.6E-08 5.4E-13 86.3 11.3 78 430-508 11-101 (111)
286 2h2b_A Tight junction protein 98.9 7.5E-09 2.6E-13 87.8 9.2 79 430-509 7-98 (107)
287 1tp5_A Presynaptic density pro 98.9 1.3E-08 4.6E-13 88.0 10.7 78 430-508 14-98 (119)
288 4fgm_A Aminopeptidase N family 98.9 1E-08 3.6E-13 112.5 12.4 80 357-439 484-564 (597)
289 1um7_A Synapse-associated prot 98.8 6.9E-09 2.4E-13 88.5 8.6 78 430-508 15-99 (113)
290 1wi4_A Synip, syntaxin binding 98.8 1E-08 3.5E-13 88.4 9.7 79 429-509 14-106 (109)
291 2iwq_A Multiple PDZ domain pro 98.8 1.4E-08 4.7E-13 89.6 10.6 78 431-508 25-119 (123)
292 2e7k_A Maguk P55 subfamily mem 98.8 7E-09 2.4E-13 86.4 8.2 78 430-508 6-88 (91)
293 2dmz_A INAD-like protein; PDZ 98.8 7E-09 2.4E-13 91.1 8.6 80 430-509 15-107 (129)
294 2yt7_A Amyloid beta A4 precurs 98.8 1.4E-08 4.7E-13 85.9 9.9 78 430-507 9-98 (101)
295 3soe_A Membrane-associated gua 98.8 1.3E-08 4.3E-13 90.0 10.0 82 429-513 11-98 (113)
296 1vb7_A PDZ and LIM domain 2; P 98.8 3.5E-09 1.2E-13 88.2 6.1 74 436-509 10-90 (94)
297 2iwn_A Multiple PDZ domain pro 98.8 2.5E-08 8.6E-13 82.3 11.0 77 431-508 5-93 (97)
298 3rle_A Golgi reassembly-stacki 98.8 1.4E-08 4.7E-13 96.8 10.7 93 356-451 93-198 (209)
299 2kjp_A Uncharacterized protein 98.8 8.5E-10 2.9E-14 92.8 2.0 66 369-437 1-67 (91)
300 1wg6_A Hypothetical protein (r 98.8 5.7E-09 1.9E-13 92.3 7.4 78 431-508 26-122 (127)
301 1wfv_A Membrane associated gua 98.8 4.1E-09 1.4E-13 88.5 6.1 78 430-508 11-96 (103)
302 2dm8_A INAD-like protein; PDZ 98.8 1E-08 3.5E-13 88.2 8.7 80 429-509 16-104 (116)
303 3cyy_A Tight junction protein 98.8 3E-08 1E-12 81.4 11.0 70 439-508 12-83 (92)
304 2rcz_A Tight junction protein 98.8 2.8E-08 9.6E-13 79.3 10.6 72 436-507 7-80 (81)
305 2yuy_A RHO GTPase activating p 98.8 3.5E-09 1.2E-13 93.1 5.7 56 453-508 65-120 (126)
306 1x5n_A Harmonin; PDZ domain, u 98.8 1.1E-08 3.9E-13 87.8 8.8 80 427-507 12-98 (114)
307 2i4s_A General secretion pathw 98.8 2.2E-08 7.7E-13 85.4 10.5 65 370-436 38-103 (105)
308 1fc6_A Photosystem II D1 prote 98.8 1.6E-08 5.5E-13 104.7 11.5 85 355-439 82-172 (388)
309 1ufx_A KIAA1526 protein; PDZ d 98.8 1.3E-08 4.3E-13 87.1 8.8 77 431-508 7-97 (103)
310 2edp_A Fragment, shroom family 98.8 7.8E-09 2.7E-13 87.3 7.3 76 433-509 12-95 (100)
311 1z87_A Alpha-1-syntrophin; pro 98.8 5.5E-09 1.9E-13 104.3 7.4 82 430-511 77-166 (263)
312 2zpm_A Regulator of sigma E pr 98.8 6.7E-09 2.3E-13 85.5 6.6 67 370-438 5-71 (91)
313 3bpu_A Membrane-associated gua 98.8 2.1E-08 7.1E-13 82.2 9.2 77 430-508 3-86 (88)
314 1n7t_A 99-MER peptide of densi 98.8 1E-08 3.4E-13 86.6 7.5 75 431-508 12-101 (103)
315 3k1r_A Harmonin; protein-prote 98.8 2E-08 6.7E-13 94.4 10.2 79 430-509 84-169 (192)
316 1x6d_A Interleukin-16; PDZ dom 98.8 1E-08 3.5E-13 88.8 7.7 81 430-510 15-105 (119)
317 1i16_A Interleukin 16, LCF; cy 98.8 1E-08 3.5E-13 90.9 7.6 78 430-508 29-118 (130)
318 2edv_A FERM and PDZ domain-con 98.8 7.6E-09 2.6E-13 86.9 6.4 78 430-508 8-89 (96)
319 2kom_A Partitioning defective 98.8 5.1E-08 1.7E-12 85.4 11.7 78 430-508 30-120 (121)
320 2kl1_A YLBL protein; structure 98.7 6.9E-09 2.4E-13 87.2 5.2 68 368-438 4-72 (94)
321 3id1_A Regulator of sigma E pr 98.7 2.4E-08 8.2E-13 84.2 8.4 64 371-436 4-70 (95)
322 2eaq_A LIM domain only protein 98.7 4.6E-08 1.6E-12 80.3 9.5 66 442-507 17-88 (90)
323 1uit_A Human discs large 5 pro 98.7 3.2E-08 1.1E-12 85.5 8.8 77 431-508 20-101 (117)
324 1p1d_A PDZ45, glutamate recept 98.7 4.1E-08 1.4E-12 91.7 10.0 79 350-429 111-195 (196)
325 2qt5_A Glutamate receptor-inte 98.7 7.3E-08 2.5E-12 90.0 11.6 78 431-508 8-93 (200)
326 2jxo_A Ezrin-radixin-moesin-bi 98.7 6.4E-08 2.2E-12 80.8 9.9 76 431-507 10-92 (98)
327 2vz5_A TAX1-binding protein 3; 98.7 4.1E-08 1.4E-12 88.4 9.3 64 453-516 68-132 (139)
328 1v6b_A Harmonin isoform A1; st 98.7 4.2E-08 1.4E-12 85.6 8.8 66 443-508 29-107 (118)
329 1ujv_A Membrane associated gua 98.7 9.2E-08 3.1E-12 80.5 10.2 77 429-508 9-91 (96)
330 1qau_A Neuronal nitric oxide s 98.7 8.5E-08 2.9E-12 81.9 10.0 79 432-510 3-89 (112)
331 2kjd_A Sodium/hydrogen exchang 98.7 8.4E-08 2.9E-12 83.8 10.0 80 430-510 9-95 (128)
332 3kzd_A TIAM-1, T-lymphoma inva 98.7 6.2E-08 2.1E-12 82.9 8.6 73 431-505 7-89 (94)
333 3tsv_A Tight junction protein 98.6 1E-07 3.5E-12 84.1 9.8 67 442-508 39-112 (124)
334 1v5l_A PDZ and LIM domain 3; a 98.6 1.1E-08 3.8E-13 86.7 3.4 77 431-509 6-89 (103)
335 2lob_A Golgi-associated PDZ an 98.1 3.9E-09 1.3E-13 91.8 0.0 74 432-505 29-110 (112)
336 2hga_A Conserved protein MTH13 98.6 1E-07 3.6E-12 84.7 9.0 77 367-448 23-104 (125)
337 3sfj_A TAX1-binding protein 3; 98.6 1.4E-07 4.8E-12 79.4 9.3 55 453-507 49-104 (104)
338 1uez_A KIAA1526 protein; PDZ d 98.6 6E-08 2.1E-12 81.5 6.8 78 430-508 8-93 (101)
339 1wif_A RSGI RUH-020, riken cDN 98.6 5.3E-08 1.8E-12 87.1 6.5 77 430-507 27-110 (126)
340 1vae_A Rhophilin 2, rhophilin, 98.6 3.9E-08 1.3E-12 85.4 5.4 77 431-508 16-96 (111)
341 2krg_A Na(+)/H(+) exchange reg 98.6 8.8E-08 3E-12 92.8 7.5 83 427-510 6-95 (216)
342 1w9e_A Syntenin 1; cell adhesi 98.6 4E-07 1.4E-11 83.0 11.4 78 430-507 4-86 (166)
343 2d8i_A T-cell lymphoma invasio 98.5 1.3E-07 4.5E-12 82.8 7.4 77 431-509 16-102 (114)
344 2qbw_A PDZ-fibronectin fusion 98.5 1.9E-07 6.6E-12 86.5 8.2 53 453-506 28-80 (195)
345 3qik_A Phosphatidylinositol 3, 98.5 4.6E-07 1.6E-11 78.8 9.9 73 434-507 21-100 (101)
346 2yub_A LIMK-2, LIM domain kina 98.5 1.4E-07 4.9E-12 82.8 6.8 59 453-511 48-108 (118)
347 1b8q_A Protein (neuronal nitri 98.5 1.1E-07 3.6E-12 83.3 5.9 81 430-510 8-96 (127)
348 3shw_A Tight junction protein 98.4 7.8E-07 2.7E-11 95.3 10.6 75 432-508 3-84 (468)
349 4a8c_A Periplasmic PH-dependen 98.4 9E-07 3.1E-11 93.2 10.0 69 369-440 363-431 (436)
350 3stj_A Protease DEGQ; serine p 98.4 4.9E-07 1.7E-11 92.7 7.7 69 444-514 257-328 (345)
351 3tsz_A Tight junction protein 98.3 1.5E-06 5.2E-11 90.8 10.7 76 431-508 10-92 (391)
352 1wh1_A KIAA1095 protein; PDZ d 98.3 9.6E-07 3.3E-11 77.3 6.4 65 442-508 32-107 (124)
353 1k32_A Tricorn protease; prote 98.3 2.7E-06 9.1E-11 96.5 11.1 82 354-438 733-825 (1045)
354 3k50_A Putative S41 protease; 98.3 8.9E-07 3E-11 93.1 6.6 68 359-430 75-147 (403)
355 3pv2_A DEGQ; trypsin fold, PDZ 98.2 1.6E-06 5.4E-11 92.0 7.5 65 369-436 386-450 (451)
356 3suz_A Amyloid beta A4 precurs 98.1 2.2E-06 7.6E-11 89.1 6.5 80 430-509 204-295 (388)
357 3id1_A Regulator of sigma E pr 98.1 6.2E-06 2.1E-10 69.3 8.0 56 452-509 5-62 (95)
358 2l97_A HTRA, putative serine p 98.0 5.5E-06 1.9E-10 73.8 6.3 55 453-510 61-117 (134)
359 3i18_A LMO2051 protein; alpha- 98.0 7.6E-06 2.6E-10 69.1 6.7 56 453-511 11-68 (100)
360 2zpm_A Regulator of sigma E pr 98.0 7.5E-06 2.6E-10 67.1 6.3 57 452-510 7-64 (91)
361 2i6v_A General secretion pathw 98.0 5.7E-06 2E-10 68.0 5.3 55 453-509 23-79 (87)
362 2pzd_A Serine protease HTRA2; 98.0 8.7E-06 3E-10 69.6 6.4 55 453-510 39-93 (113)
363 2kjp_A Uncharacterized protein 97.9 2.2E-06 7.5E-11 71.9 1.6 55 453-510 5-61 (91)
364 1ky9_A Protease DO, DEGP, HTRA 97.9 1.4E-06 4.9E-11 92.3 0.0 74 360-436 372-447 (448)
365 3qo6_A Protease DO-like 1, chl 97.9 4.2E-05 1.4E-09 78.0 10.5 62 450-513 251-326 (348)
366 2i4s_A General secretion pathw 97.9 1.9E-05 6.5E-10 67.2 6.3 55 453-509 41-97 (105)
367 2p3w_A Probable serine proteas 97.8 1.7E-05 5.8E-10 67.8 5.6 54 453-509 39-92 (112)
368 1te0_A Protease DEGS; two doma 97.8 2.2E-05 7.4E-10 79.0 6.7 68 441-510 235-305 (318)
369 2kl1_A YLBL protein; structure 97.8 7.4E-06 2.5E-10 68.6 2.6 56 453-511 9-66 (94)
370 1fc6_A Photosystem II D1 prote 97.7 8.5E-05 2.9E-09 76.8 9.7 68 442-509 85-160 (388)
371 1y8t_A Hypothetical protein RV 97.7 3.4E-05 1.2E-09 77.5 6.5 56 453-510 246-304 (324)
372 1lcy_A HTRA2 serine protease; 97.5 9.5E-05 3.2E-09 74.7 5.8 55 453-510 260-314 (325)
373 4fgm_A Aminopeptidase N family 97.5 0.00015 5.1E-09 79.7 7.7 69 441-512 484-558 (597)
374 2hga_A Conserved protein MTH13 97.5 0.00016 5.4E-09 64.1 6.3 53 453-509 29-83 (125)
375 3k50_A Putative S41 protease; 97.2 0.00024 8.3E-09 74.6 4.5 54 453-509 94-147 (403)
376 3num_A Serine protease HTRA1; 97.1 8.9E-05 3.1E-09 74.9 0.0 54 453-509 258-311 (332)
377 4fln_A Protease DO-like 2, chl 96.6 0.0025 8.4E-08 69.5 6.7 57 369-427 415-471 (539)
378 1k32_A Tricorn protease; prote 96.5 0.0048 1.6E-07 70.0 8.6 64 442-508 737-815 (1045)
379 1l1j_A Heat shock protease HTR 87.2 0.04 1.4E-06 53.4 -3.3 66 292-362 169-239 (239)
380 3sti_A Protease DEGQ; serine p 76.4 0.11 3.8E-06 50.6 -4.7 56 292-351 173-228 (245)
381 3dor_A Protein CT_858, CPAF; m 48.5 17 0.00059 40.1 5.2 43 358-404 84-127 (583)
382 3lgi_A Protease DEGS; stress-s 22.0 11 0.00036 35.8 -1.8 49 301-349 167-218 (237)
No 1
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.93 E-value=1e-24 Score=200.11 Aligned_cols=162 Identities=57% Similarity=0.970 Sum_probs=149.1
Q ss_pred ccceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVI 425 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtV 425 (530)
..|.|.++|..+++|||.+...+.|++|..|.++|+|++|||+.||+|++|||+.+.++.++....+++...++.+.|+|
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~v 83 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI 83 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEE
Confidence 46789999999999999999988999999999999999999999999999999999999986778888887788999999
Q ss_pred ecCCceeeEEeccCCCCccceeeccCcEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEE
Q psy9257 426 RDRPLERTVTLHRDSSGHFGFHFNKGQIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLI 505 (530)
Q Consensus 426 rR~~~e~tVtL~kd~~g~LGfs~~~GvV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVi 505 (530)
+|+++++++++.++....|||.+..|.|..+.++++|+++||+.||+|++|||+++.++.++++...++|+++.+.+++.
T Consensus 84 r~~~~~~~v~l~~~~~~~lG~~~~~g~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 84 RDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp ECCTTCEEEEEECCTTSCCSEEEETTEEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred EcCCCcEEEEEecCCCCcEeEEEeCCEEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 76668899999877677799999888899999999999999999999999999999999999999999999999999988
Q ss_pred eC
Q psy9257 506 PT 507 (530)
Q Consensus 506 p~ 507 (530)
+.
T Consensus 164 ~~ 165 (166)
T 1w9e_A 164 PA 165 (166)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 2
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.90 E-value=2.3e-24 Score=228.36 Aligned_cols=210 Identities=20% Similarity=0.260 Sum_probs=166.6
Q ss_pred hHHHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----eccCCCeeEEEEEe
Q psy9257 292 SELINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCA 366 (530)
Q Consensus 292 ed~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~ 366 (530)
++.|| +++++++|++++++++..|+..+++..+..-+|+..|++||++.+.++.+.. ++..++|||+.+..
T Consensus 191 ~~~iq----tda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~ 266 (451)
T 3pv2_A 191 ENFIQ----TDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQH 266 (451)
T ss_dssp -CCEE----ESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHSSCCCCBCCEEEEE
T ss_pred ceEEE----EecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcCCcccccccceEEe
Confidence 34466 8999999999999999888988886655554677889999998776665543 46778999999987
Q ss_pred cC-------------CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHH-hCCCCeEEEEEecCCcee
Q psy9257 367 IN-------------EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILK-AAPVNNIRVVIRDRPLER 432 (530)
Q Consensus 367 ~~-------------~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk-~a~G~~VtLtVrR~~~e~ 432 (530)
.+ .|++|..|.++|+|+++||+.||+|++|||+.|.++.+ +..++. ...++.|.|+|.|+++++
T Consensus 267 ~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~--l~~~l~~~~~g~~v~l~V~R~g~~~ 344 (451)
T 3pv2_A 267 LTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQ--VKTTISLLRVGSTVKIIVERDNKPL 344 (451)
T ss_dssp CCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred ccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEEEEEECCEEE
Confidence 43 79999999999999999999999999999999999755 555555 466899999999998888
Q ss_pred eEEeccCC------------CCccceeec------------cC-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChH
Q psy9257 433 TVTLHRDS------------SGHFGFHFN------------KG-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDK 487 (530)
Q Consensus 433 tVtL~kd~------------~g~LGfs~~------------~G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~e 487 (530)
++++.... ...+|+.+. .| .|.+|.++|+|+++||+.||+|++|||++|.++ +
T Consensus 345 ~~~v~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~--~ 422 (451)
T 3pv2_A 345 TLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDV--K 422 (451)
T ss_dssp EEEEECBCHHHHHHHHHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--H
T ss_pred EEEEEEccCCccccccccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCH--H
Confidence 77654221 123455543 23 388999999999999999999999999999987 6
Q ss_pred HHHHHHHhCCCEEEEEEEeCcc
Q psy9257 488 ELLEAMEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 488 eVv~iLkrsG~tVtLtVip~~~ 509 (530)
++..++++.++.+.|+|.|...
T Consensus 423 ~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 423 SLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp HHHHHTTSSCSCEEEEEEETTE
T ss_pred HHHHHHhcCCCeEEEEEEECCE
Confidence 7888888888899999988764
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.90 E-value=1.8e-23 Score=220.18 Aligned_cols=210 Identities=22% Similarity=0.297 Sum_probs=168.7
Q ss_pred hHHHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----eccCCCeeEEEEEe
Q psy9257 292 SELINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCA 366 (530)
Q Consensus 292 ed~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~ 366 (530)
++.|| +++++++|++++++++..|+..++...+..-+|+..|++||++.+.++.+.. ++..++|||+.+..
T Consensus 173 ~~~iq----~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~ 248 (436)
T 4a8c_A 173 ENFIQ----TDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 248 (436)
T ss_pred cCEEE----EcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEecc
Confidence 45566 8999999999999999888999987666655777899999998766665442 56678999999875
Q ss_pred cC------------CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHH-hCCCCeEEEEEecCCceee
Q psy9257 367 IN------------EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILK-AAPVNNIRVVIRDRPLERT 433 (530)
Q Consensus 367 ~~------------~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk-~a~G~~VtLtVrR~~~e~t 433 (530)
.+ .|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +..++. ...++.|.|+|.|++++++
T Consensus 249 ~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~ 326 (436)
T 4a8c_A 249 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE--LRSRIATTEPGTKVKLGLLRNGKPLE 326 (436)
T ss_pred cCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCEEEE
Confidence 32 78999999999999999999999999999999999865 444444 4567899999999888777
Q ss_pred EEeccCCC---------Ccccee---ec--------cCc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHH
Q psy9257 434 VTLHRDSS---------GHFGFH---FN--------KGQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEA 492 (530)
Q Consensus 434 VtL~kd~~---------g~LGfs---~~--------~Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~i 492 (530)
+++..... ..+|+. +. .|. |.+|.++++|+++||+.||+|++|||+++.++ +++..+
T Consensus 327 ~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~--~~~~~~ 404 (436)
T 4a8c_A 327 VEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSI--AEMRKV 404 (436)
T ss_pred EEEEECCCCcccccccccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHH
Confidence 66542111 113333 21 243 88999999999999999999999999999987 679999
Q ss_pred HHhCCCEEEEEEEeCcc
Q psy9257 493 MEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 493 LkrsG~tVtLtVip~~~ 509 (530)
++..++.+.|+|.|...
T Consensus 405 l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 405 LAAKPAIIALQIVRGNE 421 (436)
T ss_pred HHhCCCeEEEEEEECCE
Confidence 98877899999988764
No 4
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.89 E-value=4.6e-22 Score=183.36 Aligned_cols=161 Identities=20% Similarity=0.325 Sum_probs=135.2
Q ss_pred cceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 347 IRELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
.+++.+.+.. .+|||++..+ ..|++|..|.++|+|+++| |+.||+|++|||+.+.++++..+..+++. .
T Consensus 6 ~~~v~l~~~~-~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~ 83 (196)
T 3gsl_A 6 YEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE-A 83 (196)
T ss_dssp EEEEEEECBT-TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-S
T ss_pred EEEEEEEECC-CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-C
Confidence 4567777764 4599999874 3589999999999999999 99999999999999999999877777765 4
Q ss_pred CCeEEEEEecCC----ceeeEEeccCCCCccceeecc-----------C-cEEEEccCCHHHHcC-CCCCCEEEEEcCee
Q psy9257 418 VNNIRVVIRDRP----LERTVTLHRDSSGHFGFHFNK-----------G-QIVSLVKDSSAARNG-LLVNHNILEVNGAN 480 (530)
Q Consensus 418 G~~VtLtVrR~~----~e~tVtL~kd~~g~LGfs~~~-----------G-vV~sVv~gSpAarAG-Lr~GDrILeVNGq~ 480 (530)
+..+.|+|.|++ ..+++++.+... .+||.+.. | .|..|.++|+|+++| |+.||+|++|||++
T Consensus 84 g~~v~l~v~r~~~~~~~~~~v~l~~~~~-~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~ 162 (196)
T 3gsl_A 84 GSIVRLYVMRRKPPAEKVMEIKLIKGPK-GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVG 162 (196)
T ss_dssp CSEEEEEEEEECCCCEEEEEEEEEEBTT-BSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CCcEEEEEEecCCCccccEEEEEecCCC-CceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCc
Confidence 788999998754 234556655544 58998853 2 388999999999999 99999999999999
Q ss_pred cCCCChHHHHHHHHhCCCEEEEEEEeCcch
Q psy9257 481 VVGLKDKELLEAMEKGGSVLTLTLIPTSMY 510 (530)
Q Consensus 481 V~gls~eeVv~iLkrsG~tVtLtVip~~~~ 510 (530)
|.+++.+++..++++.++.+.|+|.|....
T Consensus 163 v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 163 LEDVMHEDAVAALKNTYDVVYLKVAKPSNA 192 (196)
T ss_dssp CSSCBHHHHHHHHHSCCEEEEEEEEEESCC
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 999888999999998899999999886543
No 5
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.88 E-value=1.5e-21 Score=182.92 Aligned_cols=162 Identities=16% Similarity=0.231 Sum_probs=134.9
Q ss_pred eEEEeccCCCeeEEEEEecC-----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCC--cCHHHHHHHHHhCCCCe
Q psy9257 349 ELVLCKDASGLIGLRVCAIN-----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAG--YNMKQVHKILKAAPVNN 420 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~-----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g--~s~~~v~~LLk~a~G~~ 420 (530)
.+.+.+. ..+|||.+..+. .|++|..|.++|+|+++| |+.||+|++|||+.+.+ +++.++..+++...+..
T Consensus 21 ~v~~~~~-~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~ 99 (206)
T 3r0h_A 21 LIELKVE-KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKA 99 (206)
T ss_dssp EEEEECT-TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSE
T ss_pred EEEEEeC-CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCc
Confidence 4555554 567999998632 589999999999999999 99999999999999999 77888888887655444
Q ss_pred EEEEEecCCc----eeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHH
Q psy9257 421 IRVVIRDRPL----ERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLE 491 (530)
Q Consensus 421 VtLtVrR~~~----e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~ 491 (530)
+.|+|.|++. .+++.+.+.....|||.+.. |. |.+|.++|+|+++| |+.||+|++|||++|.+++++++..
T Consensus 100 v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~ 179 (206)
T 3r0h_A 100 VTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYA 179 (206)
T ss_dssp EEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred eEEEEEecccCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 9999988654 34556666665679999863 33 89999999999999 9999999999999999999899999
Q ss_pred HHHhCCCEEEEEEEeCcchh
Q psy9257 492 AMEKGGSVLTLTLIPTSMYQ 511 (530)
Q Consensus 492 iLkrsG~tVtLtVip~~~~e 511 (530)
+++..++.+.|+|.|.....
T Consensus 180 ~l~~~~~~v~L~V~R~~~~~ 199 (206)
T 3r0h_A 180 LFKGANGKVSMEVTRPKPTL 199 (206)
T ss_dssp HHHTCCSEEEEEEEEECCCC
T ss_pred HHHcCCCeEEEEEEeCCCCC
Confidence 99998999999998865433
No 6
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.87 E-value=3.5e-21 Score=180.65 Aligned_cols=162 Identities=19% Similarity=0.342 Sum_probs=139.1
Q ss_pred cceEEEeccCCCeeEEEEEec-------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-
Q psy9257 347 IRELVLCKDASGLIGLRVCAI-------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP- 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~-------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~- 417 (530)
.++|.+.++...+|||++... ..+++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++...
T Consensus 7 ~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 86 (196)
T 1p1d_A 7 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI 86 (196)
T ss_dssp EEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456778888778899999975 3579999999999999999 9999999999999999876777888888765
Q ss_pred CCeEEEEEecCCc--------eeeEEeccCCCCccceeecc--------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCe
Q psy9257 418 VNNIRVVIRDRPL--------ERTVTLHRDSSGHFGFHFNK--------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGA 479 (530)
Q Consensus 418 G~~VtLtVrR~~~--------e~tVtL~kd~~g~LGfs~~~--------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq 479 (530)
+..+.|+|.|+++ .+++.+.++....|||.+.. |. |..|.++++|+++| |+.||+|++|||+
T Consensus 87 g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~ 166 (196)
T 1p1d_A 87 TSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNI 166 (196)
T ss_dssp SSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTE
T ss_pred CCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCE
Confidence 7899999988763 45677776556679998853 33 88999999999999 9999999999999
Q ss_pred ecCCCChHHHHHHHHhCCCEEEEEEEeCc
Q psy9257 480 NVVGLKDKELLEAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 480 ~V~gls~eeVv~iLkrsG~tVtLtVip~~ 508 (530)
++.+++.+++..++++.++.+.|+|.|..
T Consensus 167 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 167 RLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp EGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred ECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 99998788999999987999999998753
No 7
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.87 E-value=1.2e-20 Score=176.92 Aligned_cols=161 Identities=24% Similarity=0.348 Sum_probs=135.3
Q ss_pred ccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
+.+.+.+.+...++|||.+... ..|++|..|.++|+|+++ ||+.||+|++|||+.+.++++.++..+++. .++.|
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v 85 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN-VGERV 85 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeE
Confidence 3456777777778899999864 367999999999999999 899999999999999999988888888865 47889
Q ss_pred EEEEecCC------------ceeeEEeccCCCCccceeeccC-----------cEEEEccCCHHHHcC-CCCCCEEEEEc
Q psy9257 422 RVVIRDRP------------LERTVTLHRDSSGHFGFHFNKG-----------QIVSLVKDSSAARNG-LLVNHNILEVN 477 (530)
Q Consensus 422 tLtVrR~~------------~e~tVtL~kd~~g~LGfs~~~G-----------vV~sVv~gSpAarAG-Lr~GDrILeVN 477 (530)
.|+|.|+. +++++++.+. ...|||.+.+| .|..|.++++|+++| |+.||+|++||
T Consensus 86 ~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~-~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~in 164 (200)
T 2qt5_A 86 VLEVEYELPPVSIQGSSVMFRTVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVD 164 (200)
T ss_dssp EEEEEEECCCCCCCCSSEEEEEEEEEEECB-TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEET
T ss_pred EEEEeccCCCcccCCCccceeEEEEEEecC-CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEEC
Confidence 99998754 3455565543 35589986532 288999999999999 99999999999
Q ss_pred CeecCCCChHHHHHHHHhCCCEEEEEEEeCc
Q psy9257 478 GANVVGLKDKELLEAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 478 Gq~V~gls~eeVv~iLkrsG~tVtLtVip~~ 508 (530)
|+++.+++.+++..+|+..++.+.|+|.|..
T Consensus 165 g~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 165 GIRLLGTTHAEAMSILKQCGQEATLLIEYDV 195 (200)
T ss_dssp TEECTTCCHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred CEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 9999988889999999988899999998754
No 8
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.85 E-value=1.5e-22 Score=210.67 Aligned_cols=175 Identities=27% Similarity=0.482 Sum_probs=75.6
Q ss_pred ccccceEEEeccCCCeeEEEEEecCC-----cEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC-
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCAINE-----GVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA- 416 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~~~~-----GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a- 416 (530)
....++|.+.+..+.+|||.+..... |++|..|.+||+|+++| |+.||+|++|||+.+.+|++.++..+++..
T Consensus 202 ~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 281 (388)
T 3suz_A 202 SENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK 281 (388)
T ss_dssp SSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred cccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence 34467788888777789999886443 48999999999999999 999999999999999999877788888765
Q ss_pred CCCeEEEEEecCCceeeEEec-cCCCCccceeeccCcEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 417 PVNNIRVVIRDRPLERTVTLH-RDSSGHFGFHFNKGQIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 417 ~G~~VtLtVrR~~~e~tVtL~-kd~~g~LGfs~~~GvV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
.+..+.|+|.|.+..+++++. ++..+.|||.+.+|.|..|.++|+|+++||+.||+|++|||++|.+++++++..+|++
T Consensus 282 ~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~ 361 (388)
T 3suz_A 282 NQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSN 361 (388)
T ss_dssp TCSCEEEEEEECCSCC----------------------------------------------------------------
T ss_pred CCCccccccccccccceeeEeecCCCCccceEEecCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456799999998888888873 4455679999988999999999999999999999999999999999988999999999
Q ss_pred CCCEEEEEEEeCcchhhhhhccC
Q psy9257 496 GGSVLTLTLIPTSMYQHMMKKMS 518 (530)
Q Consensus 496 sG~tVtLtVip~~~~e~m~kkLs 518 (530)
.++.+.|+|++...++.+..+..
T Consensus 362 ~~~~v~L~V~p~~~~~lltg~~~ 384 (388)
T 3suz_A 362 SVGEIHMKTMPAAMFRLLTGQET 384 (388)
T ss_dssp ---------------------CC
T ss_pred CCCeEEEEEEeccccccccCCCC
Confidence 99999999999988887766543
No 9
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.83 E-value=3.8e-23 Score=218.94 Aligned_cols=210 Identities=21% Similarity=0.269 Sum_probs=113.2
Q ss_pred hHHHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----eccCCCeeEEEEEe
Q psy9257 292 SELINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCA 366 (530)
Q Consensus 292 ed~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~ 366 (530)
.+.|| +++++++|++++++++..|+..+++..+..-+|+..|++||++.+.++.+.. ++..++|||+.+..
T Consensus 196 ~~~iq----tda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~LGv~~~~ 271 (448)
T 1ky9_A 196 ENFIQ----TDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTE 271 (448)
T ss_dssp CCCEE----ESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHHHHHHHHHHSSCCBCCCCCSCCC
T ss_pred cCEEE----EcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchhhHHHHhhhcccceecccccccc
Confidence 34566 8999999999999999888888887665554677899999998776665432 45678899998875
Q ss_pred cC------------CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceee
Q psy9257 367 IN------------EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERT 433 (530)
Q Consensus 367 ~~------------~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~t 433 (530)
.+ .|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +..++.. ..++.|.|+|.|++++++
T Consensus 272 ~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~ 349 (448)
T 1ky9_A 272 LNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAA--LRAQVGTMPVGSKLTLGLLRDGKQVN 349 (448)
T ss_dssp TTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHH--HHHHTTSSBTTCCCEEEEESSSCEEE
T ss_pred ccHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEEEEEECCEEEE
Confidence 32 69999999999999999999999999999999999855 5555543 467899999999888776
Q ss_pred EEeccCC------------CCccceeec-----cCc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 434 VTLHRDS------------SGHFGFHFN-----KGQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 434 VtL~kd~------------~g~LGfs~~-----~Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
+++.... ...+|+.+. .|. |..|.++++|+++||+.||+|++|||+.+.++ +++..++++
T Consensus 350 ~~v~~~~~~~~~~~~~~~~~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~--~~l~~~l~~ 427 (448)
T 1ky9_A 350 VNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNI--AELRKVLDS 427 (448)
T ss_dssp CCCC----------------------------------------------------------------------------
T ss_pred EEEEEecCCCcccccccccccccceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHc
Confidence 6554211 122477663 343 88999999999999999999999999999977 467888876
Q ss_pred CCCEEEEEEEeCcc
Q psy9257 496 GGSVLTLTLIPTSM 509 (530)
Q Consensus 496 sG~tVtLtVip~~~ 509 (530)
..+.+.|+|.|...
T Consensus 428 ~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 428 KPSVLALNIQRGDS 441 (448)
T ss_dssp --------------
T ss_pred CCCeEEEEEEECCE
Confidence 55688888887653
No 10
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.79 E-value=1.5e-18 Score=193.14 Aligned_cols=159 Identities=20% Similarity=0.334 Sum_probs=136.3
Q ss_pred ceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 348 RELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
++|.+.++. ++|||.+.++ +.|++|..|.+||+|+++| |+.||+|++|||+.+.++++.++..+++. .+
T Consensus 61 ~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g 138 (721)
T 2xkx_A 61 EEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE-AG 138 (721)
T ss_pred EEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc-cc
Confidence 467777765 5799999863 4679999999999999999 99999999999999999998888888865 47
Q ss_pred CeEEEEEecCC----ceeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeec
Q psy9257 419 NNIRVVIRDRP----LERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANV 481 (530)
Q Consensus 419 ~~VtLtVrR~~----~e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V 481 (530)
..|.|+|+|++ ..++++|.++.. .|||.+.+ |. |..|.++++|+++| |+.||+|++|||++|
T Consensus 139 ~~v~l~v~R~~~~~~~~~~v~l~k~~~-~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v 217 (721)
T 2xkx_A 139 SIVRLYVMRRKPPAEKVMEIKLIKGPK-GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGL 217 (721)
T ss_pred cccceEEEecccccccceeeeeeeecC-CCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeC
Confidence 88999998865 346778877643 48998864 23 88999999999999 999999999999999
Q ss_pred CCCChHHHHHHHHhCCCEEEEEEEeCcc
Q psy9257 482 VGLKDKELLEAMEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 482 ~gls~eeVv~iLkrsG~tVtLtVip~~~ 509 (530)
.++++.++..+++..++.+.|+|.|...
T Consensus 218 ~~~~~~~~~~~l~~~~~~v~l~V~R~g~ 245 (721)
T 2xkx_A 218 EDVMHEDAVAALKNTYDVVYLKVAKPSN 245 (721)
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 9999888999998888999999988653
No 11
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.79 E-value=1.5e-19 Score=196.13 Aligned_cols=203 Identities=17% Similarity=0.120 Sum_probs=154.8
Q ss_pred HHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----eccC-CCeeEEEEEec
Q psy9257 294 LINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----CKDA-SGLIGLRVCAI 367 (530)
Q Consensus 294 ~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----~K~s-~G~LG~~V~~~ 367 (530)
.|| +|+++++||+++++++..|+..|++.++.. +++..||+||++.+.++.+.. ++.. ++|||+.+...
T Consensus 188 ~IQ----tDAaInpGnSGGPLvn~~GeVIGIntai~~-~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~ 262 (539)
T 4fln_A 188 GIQ----IDAAINPGNSGGPAFNDQGECIGVAFQVYR-SEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKL 262 (539)
T ss_dssp EEE----ESSCCCTTTTTSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEEC
T ss_pred EEE----EEeEecCCCccchhccCCCcEEEEEEEEec-CCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEec
Confidence 367 999999999999999999999999776664 556679999998887776652 3333 78999999863
Q ss_pred -------------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCH---------HHHHHHHHhCCCCeEEEEE
Q psy9257 368 -------------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNM---------KQVHKILKAAPVNNIRVVI 425 (530)
Q Consensus 368 -------------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~---------~~v~~LLk~a~G~~VtLtV 425 (530)
..|++|..|.++|||+++ |+.||+|++|||+.|.+..+ .....+.....|++|+|+|
T Consensus 263 ~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v 341 (539)
T 4fln_A 263 ENPALRECLKVPTNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGI 341 (539)
T ss_dssp CCHHHHHHHTCSSSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEE
T ss_pred CCHHHHHhcCCCCcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEE
Confidence 269999999999999886 99999999999999976432 1123344456789999999
Q ss_pred ecCCceeeEEeccCC----------------CCccceeec---------------------------------cCc-EEE
Q psy9257 426 RDRPLERTVTLHRDS----------------SGHFGFHFN---------------------------------KGQ-IVS 455 (530)
Q Consensus 426 rR~~~e~tVtL~kd~----------------~g~LGfs~~---------------------------------~Gv-V~s 455 (530)
.|+++++++++.-.. ....|+.|. .|+ |..
T Consensus 342 ~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~ 421 (539)
T 4fln_A 342 IRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQ 421 (539)
T ss_dssp EETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEE
T ss_pred EECCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEE
Confidence 999988877653210 112455442 123 788
Q ss_pred EccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCC-CEEEEEE
Q psy9257 456 LVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGG-SVLTLTL 504 (530)
Q Consensus 456 Vv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG-~tVtLtV 504 (530)
|.++++|...|++.||+|++|||++|.++ +++.++|+++. +.+.+.+
T Consensus 422 V~~~s~a~~~g~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 422 VLANEVNIGYEDMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp ECCCGGGTTCSSCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEE
T ss_pred ecCCchhhhcCCCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEE
Confidence 99999999999999999999999999998 57999998654 4555554
No 12
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.75 E-value=1.3e-17 Score=159.26 Aligned_cols=138 Identities=24% Similarity=0.302 Sum_probs=113.3
Q ss_pred CCcEEEEEeccCCHhhhcCCCCC-CEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecC--CceeeEEeccC----C
Q psy9257 368 NEGVFVCLVERGSPASLVGLRFG-DQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDR--PLERTVTLHRD----S 440 (530)
Q Consensus 368 ~~GV~Vs~V~pGSPAakAGLq~G-DqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~--~~e~tVtL~kd----~ 440 (530)
..|++|..|.++|||++|||+.| |+|++|||+.+.++.+. ...+++...++.+.|+|.|. .+.+++++... .
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~-~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~ 93 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDT-LKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGG 93 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSH-HHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSS
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHH-HHHHHhcCCCCEEEEEEEecCCceEEEEEEcccccccc
Confidence 47899999999999999999999 99999999999998873 45666677789999999875 45666666433 3
Q ss_pred CCccceeec---------cCc-EEEEccCCHHHHcCCCC-CCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEEEEeCc
Q psy9257 441 SGHFGFHFN---------KGQ-IVSLVKDSSAARNGLLV-NHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLTLIPTS 508 (530)
Q Consensus 441 ~g~LGfs~~---------~Gv-V~sVv~gSpAarAGLr~-GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLtVip~~ 508 (530)
...+|+.+. .|+ |..|.++|+|+++||+. ||+|++|||+ +.++. ++...+++ .++.+.|+|.|..
T Consensus 94 ~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~--~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESE--DLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSS--CHHHHHHHTTTSCEEEEEEETT
T ss_pred cCccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHH--HHHHHHHhCCCCeEEEEEEECC
Confidence 346888875 343 88999999999999999 9999999998 87774 57777775 4788999998865
Q ss_pred c
Q psy9257 509 M 509 (530)
Q Consensus 509 ~ 509 (530)
.
T Consensus 171 ~ 171 (209)
T 3rle_A 171 T 171 (209)
T ss_dssp T
T ss_pred c
Confidence 3
No 13
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.74 E-value=5.8e-17 Score=180.44 Aligned_cols=163 Identities=21% Similarity=0.346 Sum_probs=129.6
Q ss_pred eEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 349 ELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
.|.+.+. ..+|||.+..+ ..|++|..|.+||+|+++| |+.||+|++|||+.|.++++.++..+++.. +.
T Consensus 157 ~v~l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~ 234 (721)
T 2xkx_A 157 EIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YD 234 (721)
T ss_pred eeeeeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcC-CC
Confidence 4455554 34489988753 4689999999999999999 999999999999999999887788888654 67
Q ss_pred eEEEEEecCCcee--------------------------------------------------------------eEEec
Q psy9257 420 NIRVVIRDRPLER--------------------------------------------------------------TVTLH 437 (530)
Q Consensus 420 ~VtLtVrR~~~e~--------------------------------------------------------------tVtL~ 437 (530)
.|.|+|.|++... .+.|.
T Consensus 235 ~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~ 314 (721)
T 2xkx_A 235 VVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIH 314 (721)
T ss_pred eEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEE
Confidence 8999998755431 11122
Q ss_pred cCCCCccceeecc-----Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCc-c
Q psy9257 438 RDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTS-M 509 (530)
Q Consensus 438 kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~-~ 509 (530)
+. ...|||.+.+ |+ |..|.++|+|+++| |+.||+|++|||++|.+++.+++..+|++.++.+.|+|.+.. .
T Consensus 315 ~~-~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~ 393 (721)
T 2xkx_A 315 RG-STGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEE 393 (721)
T ss_pred EC-CCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEeCchh
Confidence 22 2358998753 33 88999999999999 999999999999999999999999999988999999998764 3
Q ss_pred hhhhh
Q psy9257 510 YQHMM 514 (530)
Q Consensus 510 ~e~m~ 514 (530)
++.+.
T Consensus 394 ~~~~~ 398 (721)
T 2xkx_A 394 YSRFE 398 (721)
T ss_pred hhhhh
Confidence 34443
No 14
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.55 E-value=1.8e-15 Score=155.27 Aligned_cols=141 Identities=20% Similarity=0.266 Sum_probs=116.9
Q ss_pred hHHHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----eccCCCeeEEEEEe
Q psy9257 292 SELINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCA 366 (530)
Q Consensus 292 ed~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~ 366 (530)
++.|| +++++++|++++++++..|+..++......-+|+..|++||++.+.++.+.. ++..++|||+.+..
T Consensus 173 ~~~iq----~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~ 248 (345)
T 3stj_A 173 ENFIQ----TDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 248 (345)
T ss_dssp CCEEE----ECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEE
T ss_pred cCEEE----EecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEe
Confidence 34566 8899999999999998888998887766665778899999998776665543 45678999999986
Q ss_pred cC------------CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceee
Q psy9257 367 IN------------EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERT 433 (530)
Q Consensus 367 ~~------------~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~t 433 (530)
.+ .|++|..|.++|||+++||+.||+|++|||+.|.++.+ +..++.. ..|+.|+|+|.|++++++
T Consensus 249 ~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~ 326 (345)
T 3stj_A 249 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE--LRSRIATTEPGTKVKLGLLRNGKPLE 326 (345)
T ss_dssp CCHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHH--HHHHHHTSCTTCEEEEEEEETTEEEE
T ss_pred ecHHHHHhcCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCEEEE
Confidence 42 79999999999999999999999999999999998655 6666655 478999999999988877
Q ss_pred EEecc
Q psy9257 434 VTLHR 438 (530)
Q Consensus 434 VtL~k 438 (530)
+++.-
T Consensus 327 ~~v~l 331 (345)
T 3stj_A 327 VEVTL 331 (345)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 76643
No 15
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.50 E-value=1e-13 Score=115.83 Aligned_cols=78 Identities=55% Similarity=0.956 Sum_probs=74.3
Q ss_pred ceeeEEeccCCCCccceeeccCcEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKGQIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPT 507 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~GvV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~ 507 (530)
..++|+|.|+..+.|||.+++|.|..+.++++|+++||+.||+|++|||++|.++++++++.+|+..+.+++|+|+|.
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p~ 81 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA 81 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETTEEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred ceEEEEEEECCCCCeEEEEECCEEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEeC
Confidence 567899999988889999999999999999999999999999999999999999999999999999999999999885
No 16
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.44 E-value=3e-13 Score=121.10 Aligned_cols=101 Identities=20% Similarity=0.240 Sum_probs=84.2
Q ss_pred cceechhcccccceEEE-----eccCCCeeEEEEEec-----------------CCcEEEEEeccCCHhhhcCCCCCCEE
Q psy9257 336 SGLKKAYVTNGIRELVL-----CKDASGLIGLRVCAI-----------------NEGVFVCLVERGSPASLVGLRFGDQI 393 (530)
Q Consensus 336 vGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~~-----------------~~GV~Vs~V~pGSPAakAGLq~GDqI 393 (530)
.||+||++.+.++.+.. ++..++|||+.+... ..|++|..|.++|+|+ +||+.||+|
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~GD~I 80 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCSSCEE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCCCCEE
Confidence 58999998888887653 456789999998753 3689999999999999 999999999
Q ss_pred EEECCEEcCCcCHHHHHHHHHhC-CCCeEEEEEecCCceeeEEeccC
Q psy9257 394 LSINGETVAGYNMKQVHKILKAA-PVNNIRVVIRDRPLERTVTLHRD 439 (530)
Q Consensus 394 LaING~~V~g~s~~~v~~LLk~a-~G~~VtLtVrR~~~e~tVtL~kd 439 (530)
++|||+.+.++.+ +..++... .++.++|+|.|+++++++++...
T Consensus 81 ~~inG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 125 (134)
T 2l97_A 81 TKVDDKEIASSTD--LQSALYNHSIGDTIKITYYRNGKEETTSIKLN 125 (134)
T ss_dssp EEETTEECCCHHH--HHHHHHHSSTTCEEEEEEEETTEEEEEEEECC
T ss_pred EEECCEEcCCHHH--HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEc
Confidence 9999999998754 55666554 68899999999998888877654
No 17
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=99.40 E-value=9.1e-14 Score=142.05 Aligned_cols=135 Identities=20% Similarity=0.222 Sum_probs=110.3
Q ss_pred hhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----eccCCCeeEEEEEecC-------
Q psy9257 301 ENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCAIN------- 368 (530)
Q Consensus 301 ~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~~~------- 368 (530)
+++++++|++++++++..|+..++......-+|+..|++||++.+.++.+.. ++..+++||+.+....
T Consensus 171 ~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~~ 250 (348)
T 3qo6_A 171 TDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGV 250 (348)
T ss_dssp ECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTTTTTC
T ss_pred EeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhhhcCC
Confidence 7889999999999988888888886665555666789999997766665443 5667899999987532
Q ss_pred CcEEEEEeccCCHhhhcCCCC-----------CCEEEEECCEEcCCcCHHHHHHHHH-hCCCCeEEEEEecCCceeeEEe
Q psy9257 369 EGVFVCLVERGSPASLVGLRF-----------GDQILSINGETVAGYNMKQVHKILK-AAPVNNIRVVIRDRPLERTVTL 436 (530)
Q Consensus 369 ~GV~Vs~V~pGSPAakAGLq~-----------GDqILaING~~V~g~s~~~v~~LLk-~a~G~~VtLtVrR~~~e~tVtL 436 (530)
.|++|..|.++|||++|||+. ||+|++|||+.|.++.+ +..++. ...|+.|+|+|.|+++++++++
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~d--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 328 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSD--LYRILDQCKVGDEVTVEVLRGDHKEKISV 328 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHH--HHHHHTTCCTTCEEEEEEECSSSEEEEEE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHH--HHHHHHhCCCcCEEEEEEEECCEEEEEEE
Confidence 699999999999999999999 99999999999999855 566664 4568999999999988777665
Q ss_pred c
Q psy9257 437 H 437 (530)
Q Consensus 437 ~ 437 (530)
.
T Consensus 329 ~ 329 (348)
T 3qo6_A 329 T 329 (348)
T ss_dssp E
T ss_pred E
Confidence 4
No 18
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=113.44 Aligned_cols=98 Identities=20% Similarity=0.316 Sum_probs=83.9
Q ss_pred CCCccceechhcccccceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcC
Q psy9257 332 SSSGSGLKKAYVTNGIRELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVA 402 (530)
Q Consensus 332 SG~svGIgfAi~~~~Vr~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~ 402 (530)
+|...+.+++......+.|.+.|.. .+|||++... ..|++|..|.++++|+++| |+.||+|++|||+.|.
T Consensus 3 s~~~~~~g~~~~~~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~ 81 (120)
T 2eno_A 3 SGSSGMNGRVDYLVTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLK 81 (120)
T ss_dssp CCCCCCSSCCCEEEEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECC
T ss_pred CcccCcCCCCCCCCceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC
Confidence 4556777888888888889998876 6799999973 4689999999999999999 9999999999999999
Q ss_pred CcCHHHHHHHHHhCCCCeEEEEEecCCce
Q psy9257 403 GYNMKQVHKILKAAPVNNIRVVIRDRPLE 431 (530)
Q Consensus 403 g~s~~~v~~LLk~a~G~~VtLtVrR~~~e 431 (530)
++.+.++..+++.. +..|.|+|.|+...
T Consensus 82 ~~~~~~~~~~~~~~-g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 82 NLLHQDAVDLFRNA-GYAVSLRVQHRLQV 109 (120)
T ss_dssp SCCHHHHHHHHHHH-CSEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHcC-CCeEEEEEEeCCcC
Confidence 99987888888764 68899999886543
No 19
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=2.4e-12 Score=108.60 Aligned_cols=87 Identities=28% Similarity=0.416 Sum_probs=75.6
Q ss_pred cccccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 343 VTNGIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
....++.|.+.+...++|||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++...++..+++. +.
T Consensus 7 ~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~ 84 (100)
T 2eeh_A 7 GSDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS--SS 84 (100)
T ss_dssp CCCEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS--CS
T ss_pred CCCeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC--CC
Confidence 4556778889898889999999976 479999999999999999999999999999999999887777777765 68
Q ss_pred eEEEEEecCCce
Q psy9257 420 NIRVVIRDRPLE 431 (530)
Q Consensus 420 ~VtLtVrR~~~e 431 (530)
.+.|+|.|++++
T Consensus 85 ~v~l~v~R~g~~ 96 (100)
T 2eeh_A 85 RLHMMVRRMGSG 96 (100)
T ss_dssp SEEEEEEECSCC
T ss_pred EEEEEEEECCcC
Confidence 899999987643
No 20
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=99.36 E-value=4.9e-13 Score=134.73 Aligned_cols=136 Identities=17% Similarity=0.149 Sum_probs=105.3
Q ss_pred hhcccccccccccccccCCCCCCCCceeecCC---CCccceechhcccccceEEE-----eccCCCeeEEEEEec-----
Q psy9257 301 ENAANERESDAAGNTVARQAPRDSCTMIAPLS---SSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCAI----- 367 (530)
Q Consensus 301 ~~~ai~p~~~~~~av~~~~~~~~s~gilapvS---G~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~~----- 367 (530)
+++++++|++++++++..|+..++......-+ +...|++|+++.+.++.+.. ++..+++||+.+...
T Consensus 156 ~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~ 235 (318)
T 1te0_A 156 TDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHA 235 (318)
T ss_dssp ESSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCS
T ss_pred ECCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHH
Confidence 67888999998888887766666543322211 13578899997766665432 345688999999863
Q ss_pred -------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceeeEEecc
Q psy9257 368 -------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERTVTLHR 438 (530)
Q Consensus 368 -------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~tVtL~k 438 (530)
..|++|..|.++|||+++||+.||+|++|||+.+.++.+ +..+++. ..++.|.|+|+|+++++++++..
T Consensus 236 ~~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 312 (318)
T 1te0_A 236 QGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE--TMDQVAEIRPGSVIPVVVMRDDKQLTLQVTI 312 (318)
T ss_dssp SSSCSSSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHH--HHHHHHTSCTTCEEEEEEESSSCEEEEEEEC
T ss_pred HhccCCCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEEEEEECCEEEEEEEEE
Confidence 368999999999999999999999999999999998644 6677765 57899999999998887777653
No 21
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=99.35 E-value=5.4e-13 Score=134.39 Aligned_cols=135 Identities=18% Similarity=0.204 Sum_probs=105.5
Q ss_pred hhcccccccccccccccCCCCCCCCceeecCC-------CCccceechhcccccceEEE-----eccCCCeeEEEEEec-
Q psy9257 301 ENAANERESDAAGNTVARQAPRDSCTMIAPLS-------SSGSGLKKAYVTNGIRELVL-----CKDASGLIGLRVCAI- 367 (530)
Q Consensus 301 ~~~ai~p~~~~~~av~~~~~~~~s~gilapvS-------G~svGIgfAi~~~~Vr~V~L-----~K~s~G~LG~~V~~~- 367 (530)
+++++.+|++++++++..++..++.......+ ++..|++||++.+.++.+.. ++..+++||+.+...
T Consensus 160 ~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi~~~~~~ 239 (324)
T 1y8t_A 160 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDK 239 (324)
T ss_dssp ECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCEEEESCS
T ss_pred EcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccceEeeecc
Confidence 67888899998888877777777644433221 34578999998777665532 345688999999854
Q ss_pred -CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEec-CCceeeEEec
Q psy9257 368 -NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRD-RPLERTVTLH 437 (530)
Q Consensus 368 -~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR-~~~e~tVtL~ 437 (530)
..|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +..++.. ..++.|+|+|.| +++++++++.
T Consensus 240 ~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~~g~~~~~~v~ 310 (324)
T 1y8t_A 240 DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA--LVAAVRSKAPGATVALTFQDPSGGSRTVQVT 310 (324)
T ss_dssp SSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHH--HHHHHHTSCTTCEEEEEEECSSCCEEEEEEE
T ss_pred CCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCCCEEEEEEE
Confidence 579999999999999999999999999999999998754 5666654 468899999999 8887776654
No 22
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=4e-12 Score=105.56 Aligned_cols=82 Identities=23% Similarity=0.260 Sum_probs=72.7
Q ss_pred cceEEEeccCCCeeEEEEEec-CCcEEEEEeccCCHhhh-cCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI-NEGVFVCLVERGSPASL-VGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~-~~GV~Vs~V~pGSPAak-AGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
+|.|.+.|....+|||++... ..+++|..|.++|+|++ +||+.||+|++|||+.+.+++.+++..+++...+ .|.|+
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~ 80 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG-SITFK 80 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-cEEEE
Confidence 577888888778899999973 46799999999999999 7899999999999999998888889999998776 89999
Q ss_pred EecCC
Q psy9257 425 IRDRP 429 (530)
Q Consensus 425 VrR~~ 429 (530)
|.|..
T Consensus 81 v~r~~ 85 (88)
T 1kwa_A 81 IVPSY 85 (88)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 88864
No 23
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.35 E-value=2.7e-12 Score=112.79 Aligned_cols=91 Identities=21% Similarity=0.365 Sum_probs=73.1
Q ss_pred ccccceEEEeccCCCeeEEEEEec------CCcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCAI------NEGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
....+.|.+.|...++|||++.++ ..|++|..|.++|+|+++ ||+.||+|++|||+.+.++++.++..+++..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 101 (120)
T 2iwo_A 22 SMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA 101 (120)
T ss_dssp ---CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred CCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345678888888777899999874 248999999999999999 8999999999999999999998899999876
Q ss_pred CCCeEEEEEecCCceeeEE
Q psy9257 417 PVNNIRVVIRDRPLERTVT 435 (530)
Q Consensus 417 ~G~~VtLtVrR~~~e~tVt 435 (530)
+..|+|+|.|+++..+++
T Consensus 102 -~~~v~l~v~r~g~~~~~~ 119 (120)
T 2iwo_A 102 -SGSIEMQVVAGGDVSETS 119 (120)
T ss_dssp -CSEEEEEEECCTTSSSCC
T ss_pred -CCeEEEEEEECCccceeE
Confidence 567999999987665543
No 24
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.35 E-value=4.5e-12 Score=105.83 Aligned_cols=87 Identities=23% Similarity=0.376 Sum_probs=73.8
Q ss_pred ccceEEEeccCCCeeEEEEEecC-----CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN-----EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~-----~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
..|.|.+.++.. +|||.+.... .|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++.. ++.
T Consensus 3 ~~r~v~l~k~~~-~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~ 80 (96)
T 2v90_A 3 KPRCLHLEKGPQ-GFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSC 80 (96)
T ss_dssp CCEEEEEECBTT-BSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTE
T ss_pred CCEEEEEEeCCC-cccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCE
Confidence 356788888755 6999998632 489999999999999999999999999999999998888888888775 889
Q ss_pred EEEEEecCCceeeE
Q psy9257 421 IRVVIRDRPLERTV 434 (530)
Q Consensus 421 VtLtVrR~~~e~tV 434 (530)
+.|+|.|+++...+
T Consensus 81 v~l~v~r~~~~~~~ 94 (96)
T 2v90_A 81 VSLTVVDPEADRET 94 (96)
T ss_dssp EEEEEECCCTTSCC
T ss_pred EEEEEECCCCcccc
Confidence 99999997765543
No 25
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.33 E-value=4.1e-12 Score=107.13 Aligned_cols=92 Identities=28% Similarity=0.509 Sum_probs=74.9
Q ss_pred ceechhcccccceEEEeccCCCeeEEEEEecCC--cEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHH
Q psy9257 337 GLKKAYVTNGIRELVLCKDASGLIGLRVCAINE--GVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKIL 413 (530)
Q Consensus 337 GIgfAi~~~~Vr~V~L~K~s~G~LG~~V~~~~~--GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LL 413 (530)
|+.........+.|.+.+.. .+|||.+..... |++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..++
T Consensus 2 g~~~~~~~~~~~~v~l~k~~-~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (104)
T 3i4w_A 2 GLGEEDIPREPRRIVIHRGS-TGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 80 (104)
T ss_dssp ----CCCCSSCEEEEEECBT-TBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CcCcCCCCCccEEEEEEeCC-CccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 55555566777888888874 459999987553 99999999999999999 999999999999999999988888888
Q ss_pred HhCCCCeEEEEEecCCc
Q psy9257 414 KAAPVNNIRVVIRDRPL 430 (530)
Q Consensus 414 k~a~G~~VtLtVrR~~~ 430 (530)
+. .++.+.|+|+|+++
T Consensus 81 ~~-~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 81 KN-AGQTVTIIAQYKPE 96 (104)
T ss_dssp HT-SCSEEEEEEEECHH
T ss_pred Hc-CCCeEEEEEEECcc
Confidence 66 56889999988643
No 26
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.33 E-value=1.2e-11 Score=102.16 Aligned_cols=83 Identities=27% Similarity=0.396 Sum_probs=71.7
Q ss_pred ccceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..|.|.+.++.. +|||.+.... .|++|..|.++|+|+++||+.||+|++|||+.+.++++.++..+++.. +..+.|
T Consensus 4 ~~r~v~l~k~~~-g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l 81 (90)
T 2he4_A 4 RPRLCHLRKGPQ-GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARL 81 (90)
T ss_dssp CCEEEEEECBTT-BCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEE
T ss_pred CcEEEEEEECCC-CccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEE
Confidence 456778888754 5999998754 589999999999999999999999999999999999888888888765 789999
Q ss_pred EEecCCc
Q psy9257 424 VIRDRPL 430 (530)
Q Consensus 424 tVrR~~~ 430 (530)
+|.|...
T Consensus 82 ~v~r~~~ 88 (90)
T 2he4_A 82 LVVGPST 88 (90)
T ss_dssp EEECCCC
T ss_pred EEEccCC
Confidence 9988643
No 27
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.32 E-value=1.3e-11 Score=105.67 Aligned_cols=89 Identities=25% Similarity=0.310 Sum_probs=77.7
Q ss_pred eEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCC-CCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEE
Q psy9257 349 ELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGL-RFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVI 425 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGL-q~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtV 425 (530)
+|.+.++..++|||.+.... .|++|..|.++|+|+++|| +.||+|++|||+.+.+++.+++..+++...+..+.|+|
T Consensus 4 ~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v 83 (112)
T 1qau_A 4 SVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI 83 (112)
T ss_dssp EEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEE
T ss_pred EEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 56677777788999998754 4899999999999999997 99999999999999998777788999887788999999
Q ss_pred ecCCceeeEEec
Q psy9257 426 RDRPLERTVTLH 437 (530)
Q Consensus 426 rR~~~e~tVtL~ 437 (530)
.|+++.+++++.
T Consensus 84 ~R~g~~~~~~~~ 95 (112)
T 1qau_A 84 LRGPEGFTTHLE 95 (112)
T ss_dssp EECCTTSEEEEE
T ss_pred EeCCcccceEee
Confidence 998887777665
No 28
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.32 E-value=8.9e-12 Score=104.19 Aligned_cols=83 Identities=29% Similarity=0.406 Sum_probs=71.5
Q ss_pred ccceEEEeccCCCeeEEEEEecC---------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN---------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~---------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
.++.+.+.|....+|||.+.... .|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 45677888866778999997632 389999999999999999 99999999999999999988888888877
Q ss_pred CCCCeEEEEEecCC
Q psy9257 416 APVNNIRVVIRDRP 429 (530)
Q Consensus 416 a~G~~VtLtVrR~~ 429 (530)
.+..+.|+|.|++
T Consensus 85 -~g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 -ADFKIELEIQTFD 97 (98)
T ss_dssp -SCSEEEEEEEEC-
T ss_pred -CCCeEEEEEEeCC
Confidence 6889999999864
No 29
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.31 E-value=1.5e-11 Score=101.56 Aligned_cols=83 Identities=30% Similarity=0.354 Sum_probs=68.5
Q ss_pred cceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.|.|.+.|... +|||++.... .|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++...+..+.++
T Consensus 4 ~r~v~l~r~~~-g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~ 82 (91)
T 1g9o_A 4 PRLCCLEKGPN-GYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV 82 (91)
T ss_dssp CEEEEEECBTT-BCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred cEEEEEEeCCC-cccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence 45677877755 5999998755 59999999999999999999999999999999999988889999987655555555
Q ss_pred EecCCc
Q psy9257 425 IRDRPL 430 (530)
Q Consensus 425 VrR~~~ 430 (530)
++|+++
T Consensus 83 ~~r~~~ 88 (91)
T 1g9o_A 83 VDPETD 88 (91)
T ss_dssp ECCCCS
T ss_pred EcCCcc
Confidence 555543
No 30
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=103.36 Aligned_cols=82 Identities=26% Similarity=0.371 Sum_probs=70.7
Q ss_pred eEEEeccCCCeeEEEEEec-------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 349 ELVLCKDASGLIGLRVCAI-------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~-------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
+|.+.+. ..+|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++. .+..
T Consensus 6 ~v~l~k~-~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~ 83 (97)
T 2jil_A 6 EVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQE 83 (97)
T ss_dssp EEEEECB-TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSE
T ss_pred EEEEEeC-CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCe
Confidence 4566664 46699999875 3689999999999999999 99999999999999999888889999988 7899
Q ss_pred EEEEEecCCcee
Q psy9257 421 IRVVIRDRPLER 432 (530)
Q Consensus 421 VtLtVrR~~~e~ 432 (530)
+.|+|.|++..+
T Consensus 84 v~l~v~R~~~~~ 95 (97)
T 2jil_A 84 AALLIEYDVSET 95 (97)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEeCCCcC
Confidence 999999876554
No 31
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.30 E-value=9.7e-12 Score=112.18 Aligned_cols=87 Identities=23% Similarity=0.441 Sum_probs=69.2
Q ss_pred eccCCCeeEEEEEec---------------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 353 CKDASGLIGLRVCAI---------------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 353 ~K~s~G~LG~~V~~~---------------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
.++.+++|||.+.++ ..|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++...
T Consensus 33 ~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 112 (139)
T 2vz5_A 33 RQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRS 112 (139)
T ss_dssp EETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTT
T ss_pred CCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 445667899998752 36899999999999999999999999999999999888888889997767
Q ss_pred CCeEEEEEecCCceeeEEeccC
Q psy9257 418 VNNIRVVIRDRPLERTVTLHRD 439 (530)
Q Consensus 418 G~~VtLtVrR~~~e~tVtL~kd 439 (530)
++.|.|+|.|++++.++.+...
T Consensus 113 g~~v~l~v~R~g~~~~v~~~~~ 134 (139)
T 2vz5_A 113 EEVVRLLVTRQSLQKAVQQSML 134 (139)
T ss_dssp CSEEEEEEEECC-------CCC
T ss_pred CCEEEEEEEECCEEEEEEEeec
Confidence 7899999999887776665443
No 32
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.6e-11 Score=104.40 Aligned_cols=83 Identities=25% Similarity=0.298 Sum_probs=72.9
Q ss_pred ccceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
..+.|.+.|...++|||.+.... .|++|..|.++++|+++||+.||+|++|||+.+.+++.+++..+++. +..+.
T Consensus 15 ~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~v~ 92 (104)
T 1wi2_A 15 LPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--AREIS 92 (104)
T ss_dssp CCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--SSSEE
T ss_pred CCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCEEE
Confidence 35678888887788999999743 58999999999999999999999999999999999888889999987 67899
Q ss_pred EEEecCCc
Q psy9257 423 VVIRDRPL 430 (530)
Q Consensus 423 LtVrR~~~ 430 (530)
|+|+|++.
T Consensus 93 l~v~r~~~ 100 (104)
T 1wi2_A 93 MRVRFFSG 100 (104)
T ss_dssp EEEECCCC
T ss_pred EEEEECCC
Confidence 99988654
No 33
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.30 E-value=1.6e-11 Score=104.50 Aligned_cols=90 Identities=19% Similarity=0.286 Sum_probs=71.4
Q ss_pred ccceEEEeccCCCeeEEEEEecC--------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN--------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~--------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
.++.|.+.|.. ++|||++.++. .|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++..
T Consensus 3 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 3 KIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred eEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34567777775 56999998642 489999999999999999 999999999999999998888888888765
Q ss_pred CCCeEEEEEecCCceeeEEec
Q psy9257 417 PVNNIRVVIRDRPLERTVTLH 437 (530)
Q Consensus 417 ~G~~VtLtVrR~~~e~tVtL~ 437 (530)
+..|.|+|.|++....+.+.
T Consensus 82 -~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 82 -SDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp -CSEEEEEEECCCC-------
T ss_pred -CCeEEEEEEcCCCCCCcccc
Confidence 78999999998766655543
No 34
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1.8e-11 Score=105.96 Aligned_cols=86 Identities=21% Similarity=0.330 Sum_probs=75.2
Q ss_pred cccceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCC-CCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGL-RFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGL-q~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..++.|.+.|...++|||.+.....|++|..|.++++|+++|| +.||+|++|||+.|.+++.+++..+++... ..+.|
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l 102 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTF 102 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEECSSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEE
T ss_pred CceEEEEEEeCCCCceeEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEE
Confidence 3567788888877689999998889999999999999999998 999999999999999988888999997754 67899
Q ss_pred EEecCCce
Q psy9257 424 VIRDRPLE 431 (530)
Q Consensus 424 tVrR~~~e 431 (530)
+|.|.+++
T Consensus 103 ~v~r~~~~ 110 (113)
T 1va8_A 103 VLIPSSGP 110 (113)
T ss_dssp EEECCCCC
T ss_pred EEEECCcc
Confidence 99887654
No 35
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.29 E-value=2.8e-11 Score=101.19 Aligned_cols=84 Identities=19% Similarity=0.271 Sum_probs=70.6
Q ss_pred eEEEeccCCCeeEEEEEecC----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 349 ELVLCKDASGLIGLRVCAIN----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
.|.+.+. ..+|||.+.... .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++.. ++.+.|
T Consensus 7 ~v~l~~~-~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l 84 (98)
T 2opg_A 7 TIEISKG-RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT-PQRVRL 84 (98)
T ss_dssp EEEEECB-TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEE
T ss_pred EEEEEEC-CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEE
Confidence 5666666 456999999755 599999999999999999 999999999999999999887788888765 488999
Q ss_pred EEecCCceeeE
Q psy9257 424 VIRDRPLERTV 434 (530)
Q Consensus 424 tVrR~~~e~tV 434 (530)
+|.|++...++
T Consensus 85 ~v~R~~~~~~~ 95 (98)
T 2opg_A 85 TLYRDEAPYKS 95 (98)
T ss_dssp EEEECSSCCCE
T ss_pred EEEcCCCCCcc
Confidence 99987665443
No 36
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.29 E-value=1e-11 Score=107.87 Aligned_cols=92 Identities=23% Similarity=0.302 Sum_probs=77.1
Q ss_pred ccceEEEeccCCCeeEEEEEecC----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
.++.+.+.+....+|||++.... .|++|..|.++++|+++| |+.||+|++|||+.|.++++.++..+++...+..
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~ 94 (119)
T 1x6d_A 15 GIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPR 94 (119)
T ss_dssp TEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSS
T ss_pred CeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 34566677776788999998643 589999999999999999 9999999999999999988988999998877777
Q ss_pred EEEEEecCCceeeEEec
Q psy9257 421 IRVVIRDRPLERTVTLH 437 (530)
Q Consensus 421 VtLtVrR~~~e~tVtL~ 437 (530)
+.++|+|+++.++++-.
T Consensus 95 ~~l~v~R~~~~~~~~~~ 111 (119)
T 1x6d_A 95 QAVIVTRKLTPEAMPDL 111 (119)
T ss_dssp EEEEEEECCCSSSCCCC
T ss_pred EEEEEEcCCCccchhhc
Confidence 77888888776655433
No 37
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.29 E-value=2.2e-11 Score=102.55 Aligned_cols=84 Identities=21% Similarity=0.389 Sum_probs=71.7
Q ss_pred cccceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
...+.|.+.+.. ++|||++..+ ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++.
T Consensus 6 ~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 6 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred CccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 345678888866 6799999973 3689999999999999999 99999999999999999988888888876
Q ss_pred CCCCeEEEEEecCCc
Q psy9257 416 APVNNIRVVIRDRPL 430 (530)
Q Consensus 416 a~G~~VtLtVrR~~~ 430 (530)
. ++.+.|+|.|++.
T Consensus 85 ~-g~~v~l~v~R~~~ 98 (101)
T 2jik_A 85 A-GYAVSLRVQHRLE 98 (101)
T ss_dssp C-CSEEEEEEEEESC
T ss_pred C-CCeEEEEEEeCCC
Confidence 4 7889999988643
No 38
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.28 E-value=2.4e-11 Score=101.17 Aligned_cols=80 Identities=23% Similarity=0.497 Sum_probs=67.0
Q ss_pred EEEeccCCCeeEEEEEe---------cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 350 LVLCKDASGLIGLRVCA---------INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~---------~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
+.+.+. .++|||.+.. ...|++|..|.++|+|+++||+.||+|++|||+.+.++.+.++...++. .+..
T Consensus 7 v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~ 84 (97)
T 2w4f_A 7 LTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGTA 84 (97)
T ss_dssp EEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-SCSE
T ss_pred EEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC-CCCe
Confidence 334444 7789999986 2478999999999999999999999999999999999988666666655 6899
Q ss_pred EEEEEecCCce
Q psy9257 421 IRVVIRDRPLE 431 (530)
Q Consensus 421 VtLtVrR~~~e 431 (530)
+.|+|.|++++
T Consensus 85 v~l~v~R~g~~ 95 (97)
T 2w4f_A 85 VQMRVWRERET 95 (97)
T ss_dssp EEEEEECCSSC
T ss_pred EEEEEEeCCcc
Confidence 99999997654
No 39
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.28 E-value=4.8e-12 Score=109.46 Aligned_cols=88 Identities=31% Similarity=0.446 Sum_probs=75.0
Q ss_pred ccceEEEeccCCCeeEEEEEec------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcC-CcCHHHHHHHHHhCC
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVA-GYNMKQVHKILKAAP 417 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~-g~s~~~v~~LLk~a~ 417 (530)
.++.|.+.|...++|||++.+. ..|++|..|.++|+|+++| |+.||+|++|||+.+. +++..++..+++. .
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~ 98 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK-A 98 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-C
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-C
Confidence 3557777787677899998864 3689999999999999999 9999999999999998 8888888888877 5
Q ss_pred CCeEEEEEecCCceeeE
Q psy9257 418 VNNIRVVIRDRPLERTV 434 (530)
Q Consensus 418 G~~VtLtVrR~~~e~tV 434 (530)
+..|.|+|.|+++.+++
T Consensus 99 ~~~v~l~v~R~~~~~~~ 115 (117)
T 2o2t_A 99 KDTVQLVIARGSLPQYY 115 (117)
T ss_dssp CSEEEEEEESSCCGGGG
T ss_pred CCEEEEEEEeCCcceee
Confidence 78999999998766554
No 40
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.28 E-value=1.9e-11 Score=103.13 Aligned_cols=85 Identities=24% Similarity=0.374 Sum_probs=72.0
Q ss_pred cceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 347 IRELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
.+.|.+.+. ..+|||++.++ ..|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++. .
T Consensus 5 ~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~ 82 (102)
T 2i1n_A 5 YEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-A 82 (102)
T ss_dssp EEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred EEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 456777776 45699999874 3599999999999999999 99999999999999999888888888877 5
Q ss_pred CCeEEEEEecCCceee
Q psy9257 418 VNNIRVVIRDRPLERT 433 (530)
Q Consensus 418 G~~VtLtVrR~~~e~t 433 (530)
+..+.|+|.|+++..+
T Consensus 83 g~~v~l~v~R~~~~~~ 98 (102)
T 2i1n_A 83 GPVVRLVVRRRQPPPE 98 (102)
T ss_dssp CSEEEEEEEEECCCCS
T ss_pred CCeEEEEEEeCCCCCC
Confidence 7899999998765443
No 41
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.28 E-value=1.4e-11 Score=102.85 Aligned_cols=76 Identities=26% Similarity=0.385 Sum_probs=67.6
Q ss_pred cceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 347 IRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
.|.|.+.|+..+.|||.++. | .|..|.++++|+++||+.||+|++|||+.+.+++++++..+++ ..+..|+|+|.
T Consensus 5 ~r~v~l~k~~~g~~Gf~i~~---g-~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~ 79 (82)
T 1r6j_A 5 PRTITMHKDSTGHVGFIFKN---G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIM 79 (82)
T ss_dssp CEEEEEECCTTSCCCEEEET---T-EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEE
T ss_pred eEEEEEEECCCCCeEEEEEC---C-EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEE
Confidence 46788889888889999973 3 4789999999999999999999999999999999999999998 56788999876
Q ss_pred c
Q psy9257 427 D 427 (530)
Q Consensus 427 R 427 (530)
.
T Consensus 80 p 80 (82)
T 1r6j_A 80 P 80 (82)
T ss_dssp E
T ss_pred e
Confidence 3
No 42
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.28 E-value=2.7e-11 Score=99.32 Aligned_cols=74 Identities=23% Similarity=0.359 Sum_probs=65.3
Q ss_pred cCCCeeEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCC
Q psy9257 355 DASGLIGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 355 ~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~ 429 (530)
...++|||++.... .|++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..+++... +.+.|+|.|++
T Consensus 9 ~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 85 (87)
T 2pa1_A 9 AGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRIT 85 (87)
T ss_dssp CSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEECC
T ss_pred CCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEecC
Confidence 34567999998654 4899999999999999999999999999999999987888999998876 88999998875
No 43
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.27 E-value=1.8e-11 Score=103.41 Aligned_cols=82 Identities=23% Similarity=0.503 Sum_probs=67.8
Q ss_pred cceEEEec---cCCCeeEEEEEe---------------cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHH
Q psy9257 347 IRELVLCK---DASGLIGLRVCA---------------INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQ 408 (530)
Q Consensus 347 Vr~V~L~K---~s~G~LG~~V~~---------------~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~ 408 (530)
++.+.+.+ ..+.+|||++.+ ...|++|..|.++|+|+++||+.||+|++|||+.+.+++.++
T Consensus 5 ~~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 84 (104)
T 3sfj_A 5 VQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQ 84 (104)
T ss_dssp EEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred eEEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 34455543 344579999993 246899999999999999999999999999999999988777
Q ss_pred HHHHHHhCCCCeEEEEEecC
Q psy9257 409 VHKILKAAPVNNIRVVIRDR 428 (530)
Q Consensus 409 v~~LLk~a~G~~VtLtVrR~ 428 (530)
+..+++...+..+.|+|.|+
T Consensus 85 ~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 85 ARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEEEcC
Confidence 88888777778999998874
No 44
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.27 E-value=2.2e-11 Score=100.62 Aligned_cols=76 Identities=24% Similarity=0.369 Sum_probs=66.6
Q ss_pred CCeeEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceee
Q psy9257 357 SGLIGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERT 433 (530)
Q Consensus 357 ~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~t 433 (530)
.+.|||++.... .|++|..|.++|+|+++||+.||+|++|||+.+.++.+.++..+++. .++.+.|+|.|++++++
T Consensus 12 ~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g~~~~ 90 (91)
T 2pkt_A 12 PGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARSEHESD 90 (91)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEECCCCC
T ss_pred CCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCcccc
Confidence 466999998643 58999999999999999999999999999999999997778888877 78999999999776543
No 45
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.27 E-value=1.1e-11 Score=106.52 Aligned_cols=83 Identities=14% Similarity=0.342 Sum_probs=71.3
Q ss_pred cceEEEeccCCCeeEEEEEec-----CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC--CC
Q psy9257 347 IRELVLCKDASGLIGLRVCAI-----NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA--PV 418 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~-----~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a--~G 418 (530)
.+.|.+.|.....|||++.+. ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++++++..+++.. .+
T Consensus 6 ~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 85 (108)
T 3cbz_A 6 IITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKP 85 (108)
T ss_dssp EEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSS
T ss_pred EEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCC
Confidence 346677766667799999875 4789999999999999999 999999999999999999888899999876 45
Q ss_pred CeEEEEEecCC
Q psy9257 419 NNIRVVIRDRP 429 (530)
Q Consensus 419 ~~VtLtVrR~~ 429 (530)
..|.|+|.|..
T Consensus 86 ~~v~l~v~R~~ 96 (108)
T 3cbz_A 86 GPIVLTVAKSG 96 (108)
T ss_dssp SCEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 57999998864
No 46
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.26 E-value=3.6e-11 Score=100.64 Aligned_cols=82 Identities=18% Similarity=0.409 Sum_probs=69.5
Q ss_pred ceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 348 RELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..|.+.+. .++|||.+.... .|++|..|.++++|+++| |+.||+|++|||+.+.+++..++..+++ ..+..|.|
T Consensus 7 ~~v~l~~~-~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l 84 (97)
T 1n7e_A 7 YTVELKRY-GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTL 84 (97)
T ss_dssp EEEEEECT-TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEE
T ss_pred EEEEEEeC-CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEE
Confidence 35555444 566999998754 689999999999999999 9999999999999999988888888887 46789999
Q ss_pred EEecCCce
Q psy9257 424 VIRDRPLE 431 (530)
Q Consensus 424 tVrR~~~e 431 (530)
+|.|+++.
T Consensus 85 ~v~R~~~~ 92 (97)
T 1n7e_A 85 KIKKQTDA 92 (97)
T ss_dssp EEECCCCC
T ss_pred EEEeCCCC
Confidence 99887644
No 47
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=104.55 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=73.5
Q ss_pred ccccceEEEeccCCCeeEEEEEe-------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCA-------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~-------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
...++.|.+.|.. .+|||.+.. ...|++|..|.++++|+++| |+.||+|++|||+.+.+++.+++..+++.
T Consensus 13 ~~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 13 SPEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp CSSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred CCceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3455678888875 469999987 34789999999999999999 99999999999999999998899999988
Q ss_pred CCCCeEEEEEecCC
Q psy9257 416 APVNNIRVVIRDRP 429 (530)
Q Consensus 416 a~G~~VtLtVrR~~ 429 (530)
..+..|.|+|+|..
T Consensus 92 ~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 92 VPPGLVHLGICSGP 105 (108)
T ss_dssp SCSEEEEEEEECCC
T ss_pred CCCCeEEEEEEcCC
Confidence 76778999998853
No 48
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.26 E-value=2.3e-11 Score=108.65 Aligned_cols=84 Identities=23% Similarity=0.300 Sum_probs=73.1
Q ss_pred cccceEEEeccCCCeeEEEEEecCC---------------cEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHH
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAINE---------------GVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQV 409 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~~---------------GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v 409 (530)
...|.|.+.|...++|||++..... |++|..|.++|+|+++||+.||+|++|||+.+.+++..++
T Consensus 26 ~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 26 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 3456788888777789999998653 7999999999999999999999999999999999999889
Q ss_pred HHHHHhCCCCeEEEEEecCC
Q psy9257 410 HKILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 410 ~~LLk~a~G~~VtLtVrR~~ 429 (530)
..+++. .+..+.|+|.|..
T Consensus 106 ~~~l~~-~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 106 VNMIRQ-GGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHH-TTTEEEEEEECCC
T ss_pred HHHHHc-CCCEEEEEEEECC
Confidence 999987 5688999988754
No 49
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.26 E-value=3.7e-11 Score=102.83 Aligned_cols=80 Identities=24% Similarity=0.351 Sum_probs=68.9
Q ss_pred ceEEEeccCCCeeEEEEEecCC---------------cEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHH
Q psy9257 348 RELVLCKDASGLIGLRVCAINE---------------GVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKI 412 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~~~---------------GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~L 412 (530)
+.+.+.+...++|||++..... |++|..|.++|+|+++||+.||+|++|||+.+.++++.++..+
T Consensus 9 ~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 88 (109)
T 1q3o_A 9 KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNM 88 (109)
T ss_dssp EEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4677776667789999987543 7999999999999999999999999999999999988888888
Q ss_pred HHhCCCCeEEEEEecC
Q psy9257 413 LKAAPVNNIRVVIRDR 428 (530)
Q Consensus 413 Lk~a~G~~VtLtVrR~ 428 (530)
++.. +..+.|+|.|.
T Consensus 89 l~~~-~~~v~l~v~~~ 103 (109)
T 1q3o_A 89 IRQG-GNTLMVKVVMV 103 (109)
T ss_dssp HHHT-TTEEEEEEEEE
T ss_pred HHhC-CCEEEEEEEEC
Confidence 8775 67888888763
No 50
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.26 E-value=4.4e-11 Score=98.70 Aligned_cols=81 Identities=23% Similarity=0.386 Sum_probs=67.5
Q ss_pred cceEEEeccCC-CeeEEEEEec--CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 347 IRELVLCKDAS-GLIGLRVCAI--NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 347 Vr~V~L~K~s~-G~LG~~V~~~--~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
.+.|.+.+... ..|||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++.+.++..+++. .++.+.|
T Consensus 7 ~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l 85 (91)
T 1m5z_A 7 LHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE-SGNKLDL 85 (91)
T ss_dssp EEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-STTEEEE
T ss_pred eEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEE
Confidence 34566766543 5699999864 379999999999999999999999999999999999988777777765 4788999
Q ss_pred EEecC
Q psy9257 424 VIRDR 428 (530)
Q Consensus 424 tVrR~ 428 (530)
+|.|+
T Consensus 86 ~v~R~ 90 (91)
T 1m5z_A 86 VISRN 90 (91)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98875
No 51
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=3.5e-11 Score=99.82 Aligned_cols=81 Identities=20% Similarity=0.353 Sum_probs=68.1
Q ss_pred cceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 347 IRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
.|.|.+.++.. +|||.+.. ..|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++. .+..+.|+|.
T Consensus 4 ~r~v~l~~~~~-g~G~~l~~-~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~ 80 (91)
T 2f5y_A 4 YRQITIPRGKD-GFGFTICC-DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS-CPSEIILLVW 80 (91)
T ss_dssp EEEEEEECBTT-BTSEEEEC-SSSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEE
T ss_pred eEEEEEEeCCC-CccEEEec-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEE
Confidence 45677777654 58999974 578999999999999999999999999999999999988788888876 3567999998
Q ss_pred cCCc
Q psy9257 427 DRPL 430 (530)
Q Consensus 427 R~~~ 430 (530)
|+..
T Consensus 81 R~~~ 84 (91)
T 2f5y_A 81 RMVP 84 (91)
T ss_dssp ECC-
T ss_pred eCCC
Confidence 8653
No 52
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=3.9e-11 Score=101.12 Aligned_cols=82 Identities=23% Similarity=0.392 Sum_probs=67.8
Q ss_pred ceEEEeccCCCeeEEEEEecC------------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHH
Q psy9257 348 RELVLCKDASGLIGLRVCAIN------------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILK 414 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~~------------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk 414 (530)
+.+.+.+..+++|||.+.+.. .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++
T Consensus 6 ~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (103)
T 2fcf_A 6 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 85 (103)
T ss_dssp EEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356667777788999997632 489999999999999999 9999999999999999988888999998
Q ss_pred hCCCCeEEEEEecCCc
Q psy9257 415 AAPVNNIRVVIRDRPL 430 (530)
Q Consensus 415 ~a~G~~VtLtVrR~~~ 430 (530)
.. +..+.|+|.|...
T Consensus 86 ~~-~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 86 KA-GNPVVFMVQSIIS 100 (103)
T ss_dssp TC-CSSEEEEEECCCC
T ss_pred hC-CCcEEEEEEECCC
Confidence 76 4589999988643
No 53
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=4.5e-11 Score=102.29 Aligned_cols=82 Identities=22% Similarity=0.481 Sum_probs=68.9
Q ss_pred eEEEeccCCCeeEEEEEe---------cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 349 ELVLCKDASGLIGLRVCA---------INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~---------~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
.+.+.+. .++|||.+.. ...|++|..|.++|+|+++||+.||+|++|||+.+.++.+.++...++. .++
T Consensus 18 ~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~ 95 (110)
T 1x5q_A 18 TLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGT 95 (110)
T ss_dssp EEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCS
T ss_pred EEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC-CCC
Confidence 4445555 6789999985 3478999999999999999999999999999999999988777776665 689
Q ss_pred eEEEEEecCCcee
Q psy9257 420 NIRVVIRDRPLER 432 (530)
Q Consensus 420 ~VtLtVrR~~~e~ 432 (530)
.|.|+|.|+++.+
T Consensus 96 ~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 96 AVQMRVWRESGPS 108 (110)
T ss_dssp EEEEEEEECSSCC
T ss_pred eEEEEEEECCccC
Confidence 9999999977554
No 54
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.25 E-value=4.2e-11 Score=99.51 Aligned_cols=83 Identities=20% Similarity=0.344 Sum_probs=71.4
Q ss_pred cccceEEEeccCCCeeEEEEEec--CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAI--NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
..+|.+.+.|.. .+|||.+... ..+++|..|.++|+|+++| |+.||+|++|||..+.+++.+++..+++... ..+
T Consensus 3 ~~~r~v~l~k~~-~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v 80 (93)
T 3o46_A 3 DSVKIIRLVKNR-EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ-GAI 80 (93)
T ss_dssp -CCEEEEEEESS-SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC-EEE
T ss_pred ccEEEEEEEeCC-CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeE
Confidence 456778888764 4799999976 5789999999999999999 9999999999999999989988999998865 488
Q ss_pred EEEEecCC
Q psy9257 422 RVVIRDRP 429 (530)
Q Consensus 422 tLtVrR~~ 429 (530)
.|+|.+..
T Consensus 81 ~l~v~~~~ 88 (93)
T 3o46_A 81 TFKIIPGS 88 (93)
T ss_dssp EEEEECC-
T ss_pred EEEEEeCC
Confidence 99988754
No 55
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.25 E-value=4.3e-11 Score=98.73 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=70.1
Q ss_pred cceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
.+.|.+.+...+.|||.+... ..|++|..|.++|+|+++ ||+.||+|++|||+.+.++++.++..+++.. +..+.
T Consensus 5 ~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-~~~v~ 83 (90)
T 1qav_A 5 RRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVV 83 (90)
T ss_dssp CEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC-CSEEE
T ss_pred cEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEE
Confidence 467888887778899999864 468999999999999999 8999999999999999999988888888764 67899
Q ss_pred EEEec
Q psy9257 423 VVIRD 427 (530)
Q Consensus 423 LtVrR 427 (530)
|+|+|
T Consensus 84 l~v~r 88 (90)
T 1qav_A 84 LEVKY 88 (90)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98876
No 56
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.25 E-value=3e-11 Score=102.69 Aligned_cols=86 Identities=28% Similarity=0.373 Sum_probs=72.3
Q ss_pred cccccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcC--CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 343 VTNGIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVG--LRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAG--Lq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
....++.+.+.+...+.|||.+... ..+++|..|.++|+|+++| |+.||+|++|||+.+.++.+.++..+++...
T Consensus 14 ~~~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 14 PHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp --CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCCCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 4456778888888778899999864 3579999999999999999 9999999999999999999988888887654
Q ss_pred ---CCeEEEEEecC
Q psy9257 418 ---VNNIRVVIRDR 428 (530)
Q Consensus 418 ---G~~VtLtVrR~ 428 (530)
+..|.|+|+|+
T Consensus 94 ~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 94 ERHSGELMLLVRPN 107 (107)
T ss_dssp GSBTTBEEEEEECC
T ss_pred ccCCcEEEEEEEcC
Confidence 24889988773
No 57
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=2.7e-11 Score=105.43 Aligned_cols=84 Identities=19% Similarity=0.319 Sum_probs=70.4
Q ss_pred cceEEEeccC------CCeeEEEEEecC--------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHH
Q psy9257 347 IRELVLCKDA------SGLIGLRVCAIN--------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHK 411 (530)
Q Consensus 347 Vr~V~L~K~s------~G~LG~~V~~~~--------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~ 411 (530)
++++.+.+.. ..+|||++.+.. .|++|..|.++++|+++| |+.||+|++|||+.+.++++.++..
T Consensus 13 ~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 92 (117)
T 1ujd_A 13 HARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQS 92 (117)
T ss_dssp EEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred eEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHH
Confidence 3456666554 467999998643 279999999999999999 9999999999999999999888888
Q ss_pred HHHhCCCCeEEEEEecCCce
Q psy9257 412 ILKAAPVNNIRVVIRDRPLE 431 (530)
Q Consensus 412 LLk~a~G~~VtLtVrR~~~e 431 (530)
+++. .+..|.|+|+|++..
T Consensus 93 ~l~~-~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 93 IISQ-QSGEAEICVRLDLNM 111 (117)
T ss_dssp HHSC-CSSCEEEEEESSCCC
T ss_pred HHhc-CCCEEEEEEEECCcc
Confidence 8876 578899999987643
No 58
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=2.5e-11 Score=101.36 Aligned_cols=82 Identities=21% Similarity=0.329 Sum_probs=71.3
Q ss_pred cccceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..+|.|.+.|...++|||++.....+++|..|.++++|+++| |+.||+|++|||+.+ +.+.+++..+++.. ++.+.|
T Consensus 5 ~~~r~v~l~k~~~~~lG~~i~~~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~-~~~v~l 82 (91)
T 2e7k_A 5 SSGRMVGIRKTAGEHLGVTFRVEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA-SGSVIL 82 (91)
T ss_dssp CCSCBCCBCCCTTCCCCEEEEESSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC-CSSBCE
T ss_pred CCcEEEEEEECCCCcEeEEEEecCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC-CCeEEE
Confidence 455677777777888999999877899999999999999987 999999999999999 77777899999874 678888
Q ss_pred EEecC
Q psy9257 424 VIRDR 428 (530)
Q Consensus 424 tVrR~ 428 (530)
+|.|.
T Consensus 83 ~v~~~ 87 (91)
T 2e7k_A 83 KILSG 87 (91)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88874
No 59
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.25 E-value=3.9e-11 Score=98.82 Aligned_cols=74 Identities=19% Similarity=0.286 Sum_probs=63.8
Q ss_pred CCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCc
Q psy9257 356 ASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPL 430 (530)
Q Consensus 356 s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~ 430 (530)
..++|||++... ..|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++.. +..+.|+|.|++.
T Consensus 11 ~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 11 GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSRAIT 87 (89)
T ss_dssp SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEEECC
T ss_pred CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCCC
Confidence 346799999863 4679999999999999999999999999999999998887888888765 7889999988653
No 60
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.24 E-value=2.7e-11 Score=100.50 Aligned_cols=81 Identities=25% Similarity=0.401 Sum_probs=66.5
Q ss_pred cceEEEeccCCCeeEEEEEecCC--cEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAINE--GVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~--GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.|.+.+.+.. .+|||.+..... |++|..|.++|+|+++||+.||+|++|||..+.+++++++..+++. .+..+.++
T Consensus 6 ~r~v~l~~~~-~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~~~~~ 83 (95)
T 3r68_A 6 PRVVVIKKGS-NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLL 83 (95)
T ss_dssp CEEEEEECBT-TBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEE
T ss_pred cEEEEEecCC-CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEE
Confidence 4567777764 569999987554 9999999999999999999999999999999999988889999987 45667776
Q ss_pred EecCC
Q psy9257 425 IRDRP 429 (530)
Q Consensus 425 VrR~~ 429 (530)
+.|+.
T Consensus 84 ~~r~~ 88 (95)
T 3r68_A 84 VLDKE 88 (95)
T ss_dssp EEECC
T ss_pred EECCc
Confidence 66543
No 61
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.24 E-value=5.3e-11 Score=98.38 Aligned_cols=82 Identities=29% Similarity=0.416 Sum_probs=70.2
Q ss_pred cceEEEeccCCCeeEEEEEec--CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI--NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..+|.+.+....+|||.+... ..|++|..|.++|+|+++| |+.||+|++|||+.+.++.+.++..+++.. +..+.|
T Consensus 5 ~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l 83 (92)
T 2qg1_A 5 TLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS-LGTVTL 83 (92)
T ss_dssp EEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEE
T ss_pred EEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEE
Confidence 346777777677899999875 3699999999999999999 999999999999999998887888888764 678999
Q ss_pred EEecCC
Q psy9257 424 VIRDRP 429 (530)
Q Consensus 424 tVrR~~ 429 (530)
+|.|..
T Consensus 84 ~v~R~~ 89 (92)
T 2qg1_A 84 EVGRIS 89 (92)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 998864
No 62
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.24 E-value=5.6e-11 Score=98.40 Aligned_cols=81 Identities=19% Similarity=0.343 Sum_probs=68.4
Q ss_pred cceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 347 IRELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
+++|.+.|.. .+|||.+.+. ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++..
T Consensus 4 ~~~v~l~k~~-~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 81 (94)
T 2fe5_A 4 IMEVNLLKGP-KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT- 81 (94)
T ss_dssp EEEEEEECCT-TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC-
T ss_pred EEEEEEEECC-CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4677787774 5599999863 2589999999999999999 999999999999999999887788888765
Q ss_pred CCeEEEEEecCC
Q psy9257 418 VNNIRVVIRDRP 429 (530)
Q Consensus 418 G~~VtLtVrR~~ 429 (530)
+..|.|+|.|++
T Consensus 82 ~~~v~l~v~R~g 93 (94)
T 2fe5_A 82 SDMVYLKVAKPG 93 (94)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 468999998764
No 63
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.24 E-value=6e-11 Score=98.78 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=69.4
Q ss_pred ceEEEecc-CCCeeEEEEEec--CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 348 RELVLCKD-ASGLIGLRVCAI--NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 348 r~V~L~K~-s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..|.+.|. ...+|||.+... ..|++|..|.++|+|+++| |+.||+|++|||..+.++++.++..+++.. +..+.|
T Consensus 5 ~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l 83 (95)
T 2vwr_A 5 LQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS-GERVNL 83 (95)
T ss_dssp EEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEE
T ss_pred EEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEE
Confidence 45677764 456799999764 3689999999999999999 999999999999999999888788888764 789999
Q ss_pred EEecCCc
Q psy9257 424 VIRDRPL 430 (530)
Q Consensus 424 tVrR~~~ 430 (530)
+|.|+++
T Consensus 84 ~v~R~~~ 90 (95)
T 2vwr_A 84 TIARPGK 90 (95)
T ss_dssp EEEEESC
T ss_pred EEEcCCc
Confidence 9988643
No 64
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.6e-11 Score=105.04 Aligned_cols=82 Identities=20% Similarity=0.338 Sum_probs=70.6
Q ss_pred ccceEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
..+.|.+.|.. .+|||++.++ ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++..
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34567777765 6799999863 3589999999999999999 999999999999999999998899999765
Q ss_pred CCCeEEEEEecCC
Q psy9257 417 PVNNIRVVIRDRP 429 (530)
Q Consensus 417 ~G~~VtLtVrR~~ 429 (530)
+..|.|+|.|++
T Consensus 103 -g~~v~l~v~R~~ 114 (117)
T 2byg_A 103 -SEVVYLKVGKPT 114 (117)
T ss_dssp -CSEEEEEEEEEE
T ss_pred -CCeEEEEEEeCC
Confidence 788999998864
No 65
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.24 E-value=5.6e-11 Score=99.51 Aligned_cols=81 Identities=32% Similarity=0.413 Sum_probs=69.7
Q ss_pred cceEEEeccCCCeeEEEEEe-------c---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 347 IRELVLCKDASGLIGLRVCA-------I---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~-------~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
.+.|.+.|...+.|||++.. . ..|++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..+++..
T Consensus 5 ~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 84 (96)
T 2ego_A 5 RKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS 84 (96)
T ss_dssp EEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT
T ss_pred cEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 46788888877789999985 1 2489999999999999999999999999999999998888899999876
Q ss_pred CCCeEEEEEecC
Q psy9257 417 PVNNIRVVIRDR 428 (530)
Q Consensus 417 ~G~~VtLtVrR~ 428 (530)
+..+.|+|.+.
T Consensus 85 -~~~v~l~v~~~ 95 (96)
T 2ego_A 85 -GNVLRLETLYG 95 (96)
T ss_dssp -TTEEEEEEECC
T ss_pred -CCeEEEEEEEC
Confidence 56889988763
No 66
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.24 E-value=1.8e-11 Score=105.21 Aligned_cols=88 Identities=19% Similarity=0.357 Sum_probs=73.4
Q ss_pred eEEEeccCCCeeEEEEEe---------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 349 ELVLCKDASGLIGLRVCA---------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~---------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
.|.+.+.. .+|||++.. ...|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++.. +
T Consensus 7 ~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g 84 (113)
T 2g5m_B 7 PVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT-K 84 (113)
T ss_dssp EEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-C
T ss_pred EEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 45555554 569999987 24689999999999999999 999999999999999998888888888775 7
Q ss_pred CeEEEEEecCCceeeEEecc
Q psy9257 419 NNIRVVIRDRPLERTVTLHR 438 (530)
Q Consensus 419 ~~VtLtVrR~~~e~tVtL~k 438 (530)
..|.|+|.|++...++++..
T Consensus 85 ~~v~l~v~R~~~~~~~~v~p 104 (113)
T 2g5m_B 85 GRVRFMIGRERPGEQSEVAQ 104 (113)
T ss_dssp SSCEEEEEECCCCTTSSCSS
T ss_pred CeEEEEEEeCCCCCcchhhh
Confidence 88999999987766655544
No 67
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=2.2e-11 Score=104.20 Aligned_cols=90 Identities=21% Similarity=0.424 Sum_probs=75.3
Q ss_pred ceEEEeccCCCeeEEEEEec------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 348 RELVLCKDASGLIGLRVCAI------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
..|.+.+.. .+|||.+... ..|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++.. +..
T Consensus 10 ~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~ 87 (110)
T 1um1_A 10 FTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG-GKK 87 (110)
T ss_dssp EEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-CSE
T ss_pred EEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCe
Confidence 356666665 4699999873 4689999999999999999 999999999999999998888888888764 789
Q ss_pred EEEEEecCCceeeEEeccC
Q psy9257 421 IRVVIRDRPLERTVTLHRD 439 (530)
Q Consensus 421 VtLtVrR~~~e~tVtL~kd 439 (530)
+.|+|.|+++.+++.+...
T Consensus 88 v~l~v~R~~~~~~~~v~~~ 106 (110)
T 1um1_A 88 MRFLVAKSDVETAKKIHSG 106 (110)
T ss_dssp EEEEEECCCHHHHHHHSSC
T ss_pred EEEEEEeCCcceeEEEEec
Confidence 9999999887766665543
No 68
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.9e-11 Score=104.98 Aligned_cols=84 Identities=21% Similarity=0.349 Sum_probs=71.4
Q ss_pred ccceEEEeccCCCeeEEEEEec------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
..+.|.+.|.. .+|||++.+. ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++...
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~- 102 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK- 102 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 34578888876 5699999864 3589999999999999999 9999999999999999888888899888754
Q ss_pred CeEEEEEecCCce
Q psy9257 419 NNIRVVIRDRPLE 431 (530)
Q Consensus 419 ~~VtLtVrR~~~e 431 (530)
..|.|+|.|+++.
T Consensus 103 ~~v~l~v~R~g~~ 115 (117)
T 2fne_A 103 GTVTLMVLSSDET 115 (117)
T ss_dssp SSEEEEEEECSCE
T ss_pred CeEEEEEEeCCcc
Confidence 5699999987643
No 69
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.23 E-value=1.4e-11 Score=108.16 Aligned_cols=94 Identities=23% Similarity=0.294 Sum_probs=81.5
Q ss_pred cccceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCC-CCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGL-RFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGL-q~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
..++.|.+.++...+|||.+.... .|++|..|.++|+|+++|| +.||+|++|||+.+.+++.+++..+++...+..+
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v 86 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETH 86 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCE
T ss_pred CceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 345678888877778999998754 4899999999999999998 9999999999999999877789999988778899
Q ss_pred EEEEecCCceeeEEecc
Q psy9257 422 RVVIRDRPLERTVTLHR 438 (530)
Q Consensus 422 tLtVrR~~~e~tVtL~k 438 (530)
.|+|.|+++.+++++..
T Consensus 87 ~l~v~R~g~~~~~~~~~ 103 (127)
T 1b8q_A 87 VVLILRGPEGFTTHLET 103 (127)
T ss_dssp EEEEECCCCSEEECCCC
T ss_pred EEEEEeCCceEEEEEEE
Confidence 99999998888777654
No 70
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.23 E-value=8e-11 Score=95.95 Aligned_cols=78 Identities=27% Similarity=0.326 Sum_probs=65.4
Q ss_pred eEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEEE
Q psy9257 349 ELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIRV 423 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~VtL 423 (530)
++.+.|.. .+|||.+.... .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++... ++.+.|
T Consensus 3 ~v~l~k~~-~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 81 (85)
T 2i04_A 3 HTKLRKSS-RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 81 (85)
T ss_dssp EEEEECBT-TBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEECC-CCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 45556654 45999998743 469999999999999999 9999999999999999988888888888754 788888
Q ss_pred EEec
Q psy9257 424 VIRD 427 (530)
Q Consensus 424 tVrR 427 (530)
+|.|
T Consensus 82 ~v~R 85 (85)
T 2i04_A 82 ELCR 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8865
No 71
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.23 E-value=4.5e-11 Score=105.14 Aligned_cols=81 Identities=21% Similarity=0.305 Sum_probs=70.6
Q ss_pred cceEEEeccCCCeeEEEEEecC------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
.+.|.+.|+..++|||++.++. .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++.. +.
T Consensus 25 ~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~ 103 (118)
T 3b76_A 25 EKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-SS 103 (118)
T ss_dssp EEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-CS
T ss_pred cEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 3466777777788999999753 579999999999999999 999999999999999999999999999875 67
Q ss_pred eEEEEEecC
Q psy9257 420 NIRVVIRDR 428 (530)
Q Consensus 420 ~VtLtVrR~ 428 (530)
.|.|+|.|.
T Consensus 104 ~v~L~v~R~ 112 (118)
T 3b76_A 104 SIVLKALEV 112 (118)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEC
Confidence 899998874
No 72
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.23 E-value=4e-11 Score=102.51 Aligned_cols=83 Identities=23% Similarity=0.310 Sum_probs=70.7
Q ss_pred cccceEEEeccCCCeeEEEEEe-cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCA-INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~-~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
..++.+.+.|.....||+.+.. .+.|++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++.. +..+.
T Consensus 11 ~~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~ 89 (97)
T 2ejy_A 11 HMVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMIS 89 (97)
T ss_dssp --CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEE
T ss_pred CccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEE
Confidence 3567888888878889999986 35799999999999999999 999999999999999987777788999875 56888
Q ss_pred EEEecC
Q psy9257 423 VVIRDR 428 (530)
Q Consensus 423 LtVrR~ 428 (530)
|+|.+.
T Consensus 90 L~V~~~ 95 (97)
T 2ejy_A 90 LKVIPN 95 (97)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 888764
No 73
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.23 E-value=2.5e-11 Score=101.67 Aligned_cols=82 Identities=24% Similarity=0.323 Sum_probs=68.9
Q ss_pred ceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEE
Q psy9257 348 RELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVI 425 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtV 425 (530)
+.+.+.+.. .+|||.+.... .|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++...+..+.|+|
T Consensus 11 ~~~~l~~~~-~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v 89 (98)
T 2jxo_A 11 RLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVV 89 (98)
T ss_dssp EEEEEECTT-TCCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEC
T ss_pred EEEEEEeCC-CcccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 456666654 45999998654 599999999999999999999999999999999998788899999887667777888
Q ss_pred ecCCc
Q psy9257 426 RDRPL 430 (530)
Q Consensus 426 rR~~~ 430 (530)
.|+++
T Consensus 90 ~R~g~ 94 (98)
T 2jxo_A 90 DRETD 94 (98)
T ss_dssp CHHHH
T ss_pred ECCch
Confidence 87643
No 74
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.22 E-value=5.9e-11 Score=100.55 Aligned_cols=84 Identities=19% Similarity=0.325 Sum_probs=71.1
Q ss_pred cccceEEEeccCCCeeEEEEEecCC-----cEEEEEeccCCHhhh-cCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC-C
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAINE-----GVFVCLVERGSPASL-VGLRFGDQILSINGETVAGYNMKQVHKILKAA-P 417 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~~-----GV~Vs~V~pGSPAak-AGLq~GDqILaING~~V~g~s~~~v~~LLk~a-~ 417 (530)
..++.+.+.+....+|||++..... +++|..|.++++|++ +||+.||+|++|||+.+.+.+.+++..+++.. .
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3456777777766789999986433 699999999999999 56999999999999999888888899999875 6
Q ss_pred CCeEEEEEecC
Q psy9257 418 VNNIRVVIRDR 428 (530)
Q Consensus 418 G~~VtLtVrR~ 428 (530)
++.|+|+|.|.
T Consensus 88 g~~v~l~v~R~ 98 (101)
T 2yt7_A 88 QTSVTLSIVHC 98 (101)
T ss_dssp SSEEEEEECCC
T ss_pred CCeEEEEEEeC
Confidence 78999999875
No 75
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.22 E-value=4.3e-11 Score=101.87 Aligned_cols=82 Identities=23% Similarity=0.416 Sum_probs=69.5
Q ss_pred eEEEe-ccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 349 ELVLC-KDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 349 ~V~L~-K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
.+.+. +....+|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++. .+
T Consensus 15 ~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g 93 (108)
T 2jre_A 15 SVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-AG 93 (108)
T ss_dssp EEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-HC
T ss_pred EEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 45554 45677799999863 3589999999999999999 99999999999999999988788888877 67
Q ss_pred CeEEEEEecCCce
Q psy9257 419 NNIRVVIRDRPLE 431 (530)
Q Consensus 419 ~~VtLtVrR~~~e 431 (530)
..|.|+|.|+++.
T Consensus 94 ~~v~l~v~R~~~~ 106 (108)
T 2jre_A 94 NPVRLLLIRRLPL 106 (108)
T ss_dssp SEEEEEEEECCCC
T ss_pred CeEEEEEEeCCcC
Confidence 8999999887644
No 76
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=3.6e-11 Score=105.32 Aligned_cols=88 Identities=22% Similarity=0.397 Sum_probs=74.7
Q ss_pred ccccceEEEeccCCCeeEEEEEec-------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCAI-------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~~-------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
....+.|.+.+....+|||.+... ..+++|..|.++++|+++| |+.||+|++|||+.+.+++.+++.++++.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 334567788888778899999853 3568999999999999999 99999999999999999777788888887
Q ss_pred CC-CCeEEEEEecCCce
Q psy9257 416 AP-VNNIRVVIRDRPLE 431 (530)
Q Consensus 416 a~-G~~VtLtVrR~~~e 431 (530)
.. ++.|.|+|+|+...
T Consensus 93 ~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HTTTTCEEEEEEEECCC
T ss_pred CCCCCeEEEEEEECCcc
Confidence 65 78999999987654
No 77
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=99.22 E-value=7.8e-12 Score=126.64 Aligned_cols=129 Identities=24% Similarity=0.275 Sum_probs=96.0
Q ss_pred hhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEEE-----------eccCCCeeEEEEEec--
Q psy9257 301 ENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELVL-----------CKDASGLIGLRVCAI-- 367 (530)
Q Consensus 301 ~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~L-----------~K~s~G~LG~~V~~~-- 367 (530)
+++++++|++++++++..|+..++...... .|++||++.+.++++.. .+..+++||+.+...
T Consensus 164 ~d~~~~~G~SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~ 238 (325)
T 1lcy_A 164 TDAAIDFGNAGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSP 238 (325)
T ss_dssp ESSCCSTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCH
T ss_pred EcCCCCCCCccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCH
Confidence 678888888888887777676666443332 46788886554443321 134567899988752
Q ss_pred ----------------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCce
Q psy9257 368 ----------------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLE 431 (530)
Q Consensus 368 ----------------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e 431 (530)
..|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +.++++. ++.+.|+|+|+++.
T Consensus 239 ~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~--l~~~l~~--~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 239 SILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED--VYEAVRT--QSQLAVQIRRGRET 314 (325)
T ss_dssp HHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHHTT--CSSEEEEEEETTEE
T ss_pred HHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHH--HHHHHhC--CCeEEEEEEECCEE
Confidence 258999999999999999999999999999999988644 6677754 57899999999988
Q ss_pred eeEEecc
Q psy9257 432 RTVTLHR 438 (530)
Q Consensus 432 ~tVtL~k 438 (530)
+++++..
T Consensus 315 ~~~~v~~ 321 (325)
T 1lcy_A 315 LTLYVTP 321 (325)
T ss_dssp EEEEECC
T ss_pred EEEEEEE
Confidence 8887754
No 78
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=3.2e-11 Score=106.16 Aligned_cols=86 Identities=20% Similarity=0.410 Sum_probs=73.6
Q ss_pred cceEEEeccCCCeeEEEEEe--------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 347 IRELVLCKDASGLIGLRVCA--------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~--------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
...|.+.+....+|||.+.. ...|++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++. .
T Consensus 16 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~ 94 (129)
T 2dmz_A 16 TYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-A 94 (129)
T ss_dssp EEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-C
T ss_pred EEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 34566666667789999987 34789999999999999999 99999999999999999888889999988 7
Q ss_pred CCeEEEEEecCCceee
Q psy9257 418 VNNIRVVIRDRPLERT 433 (530)
Q Consensus 418 G~~VtLtVrR~~~e~t 433 (530)
+..|.|+|.|+++.++
T Consensus 95 ~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 95 GQVVHLTLVRRKTSSS 110 (129)
T ss_dssp CSSEEEEEEEESSSSS
T ss_pred CCeEEEEEEeCCcccc
Confidence 8899999998765433
No 79
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.22 E-value=7.1e-11 Score=102.00 Aligned_cols=82 Identities=24% Similarity=0.391 Sum_probs=69.3
Q ss_pred cceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
.+.|.+.+.. .+|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++. .+..|.
T Consensus 25 ~~~v~l~~~~-~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~ 102 (112)
T 2r4h_A 25 FYTVELERGA-KGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVR 102 (112)
T ss_dssp EEEEEEECBT-TBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEE
T ss_pred eEEEEEEcCC-CccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEE
Confidence 4466676664 4599999864 4689999999999999999 99999999999999999988888888876 578899
Q ss_pred EEEecCCc
Q psy9257 423 VVIRDRPL 430 (530)
Q Consensus 423 LtVrR~~~ 430 (530)
|+|.|++.
T Consensus 103 l~v~R~~~ 110 (112)
T 2r4h_A 103 LFLKRGET 110 (112)
T ss_dssp EEEECCEE
T ss_pred EEEEeCCc
Confidence 99988653
No 80
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=2e-11 Score=105.97 Aligned_cols=90 Identities=27% Similarity=0.350 Sum_probs=75.8
Q ss_pred cccccceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhc--CCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 343 VTNGIRELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLV--GLRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakA--GLq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
.....+.|.+.|...+.|||.+.... .|++|..|.++|+|+++ ||+.||+|++|||+.+.++++.++..+++...
T Consensus 12 ~~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 12 PHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp CSSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 44556778888888888999998643 47999999999999999 99999999999999999999888888887654
Q ss_pred C---CeEEEEEecCCcee
Q psy9257 418 V---NNIRVVIRDRPLER 432 (530)
Q Consensus 418 G---~~VtLtVrR~~~e~ 432 (530)
+ ..|.|+|.|+....
T Consensus 92 ~~~~~~v~l~v~R~~~~~ 109 (119)
T 2cs5_A 92 ERHSGELMLLVRPNAVYD 109 (119)
T ss_dssp HCCSSCEEEEEECCCCCC
T ss_pred ccCCCEEEEEEEcccccC
Confidence 3 57999999875443
No 81
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.21 E-value=9.7e-11 Score=97.51 Aligned_cols=80 Identities=24% Similarity=0.392 Sum_probs=68.3
Q ss_pred ceEEEeccCCCeeEEEEEec------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 348 RELVLCKDASGLIGLRVCAI------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
..+.+.+. ..+|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++. .+..
T Consensus 7 ~~v~l~k~-~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~ 84 (96)
T 1d5g_A 7 FEVELAKN-DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQV 84 (96)
T ss_dssp EEEEEECS-SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSE
T ss_pred EEEEEEeC-CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCe
Confidence 45666665 46699999863 2589999999999999999 99999999999999999988888888876 5788
Q ss_pred EEEEEecCC
Q psy9257 421 IRVVIRDRP 429 (530)
Q Consensus 421 VtLtVrR~~ 429 (530)
+.|+|.|++
T Consensus 85 v~l~v~R~~ 93 (96)
T 1d5g_A 85 VHLLLEKGQ 93 (96)
T ss_dssp EEEEEECCS
T ss_pred EEEEEEcCC
Confidence 999998864
No 82
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=6.4e-11 Score=103.19 Aligned_cols=86 Identities=21% Similarity=0.338 Sum_probs=73.8
Q ss_pred cccceEEEeccCCCeeEEEEEecC----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAIN----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
...+.|.+.+....+|||.+.... .+++|..|.++++|+++| |+.||+|++|||+.+.+++.+++.++++. .+.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~ 92 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISE 92 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSS
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCC
Confidence 345678888877677999998752 349999999999999999 99999999999999999888889999985 689
Q ss_pred eEEEEEecCCce
Q psy9257 420 NIRVVIRDRPLE 431 (530)
Q Consensus 420 ~VtLtVrR~~~e 431 (530)
.|.|+|.|+.++
T Consensus 93 ~v~l~v~r~~~~ 104 (117)
T 1v62_A 93 KVRLEILPVPQS 104 (117)
T ss_dssp EEEEEECCBTTB
T ss_pred eEEEEEEECCCC
Confidence 999999987543
No 83
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.21 E-value=4.1e-11 Score=101.71 Aligned_cols=85 Identities=28% Similarity=0.379 Sum_probs=72.1
Q ss_pred cceEEEeccCCCeeEEEEEec--CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI--NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.|.+.+.+.....+||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++.+.++..+++. .++.|.|+
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~ 80 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK-SGNSVTLL 80 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH-TTTEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCEEEEE
Confidence 467778887777788888754 358999999999999999999999999999999999997778888875 57899999
Q ss_pred EecCCcee
Q psy9257 425 IRDRPLER 432 (530)
Q Consensus 425 VrR~~~e~ 432 (530)
|.|++...
T Consensus 81 v~r~~~~~ 88 (106)
T 3ngh_A 81 VLDGDSYE 88 (106)
T ss_dssp EECHHHHH
T ss_pred EEECCeee
Confidence 99865443
No 84
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.21 E-value=9.3e-11 Score=99.66 Aligned_cols=83 Identities=29% Similarity=0.342 Sum_probs=69.4
Q ss_pred cceEEEeccCCCeeEEEEEec---------------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHH
Q psy9257 347 IRELVLCKDASGLIGLRVCAI---------------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHK 411 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~---------------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~ 411 (530)
.+.|.+.|... +|||++... ..+++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..
T Consensus 7 ~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~ 85 (107)
T 3qe1_A 7 PRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVD 85 (107)
T ss_dssp CEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35677777755 599999865 23357999999999999999999999999999999988888999
Q ss_pred HHHhCCCCeEEEEEecCCce
Q psy9257 412 ILKAAPVNNIRVVIRDRPLE 431 (530)
Q Consensus 412 LLk~a~G~~VtLtVrR~~~e 431 (530)
+++. .++.+.|+|.|...+
T Consensus 86 ~l~~-~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 86 LIRA-GEKELILTVLSVESE 104 (107)
T ss_dssp HHHH-CSSEEEEEEECSSCC
T ss_pred HHHc-CCCEEEEEEEcCCCC
Confidence 9976 478999999886543
No 85
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.21 E-value=1.3e-11 Score=102.24 Aligned_cols=83 Identities=25% Similarity=0.385 Sum_probs=68.1
Q ss_pred cceEEEeccCCCeeEEEEEec--CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI--NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.|.|.+.|+.. +|||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..+++.. ++.+.|+
T Consensus 4 pr~v~l~k~~~-~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~ 81 (91)
T 2vsp_A 4 PKLCRLAKGEN-GYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLL 81 (91)
T ss_dssp EEEEEEECBTT-BTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEE
T ss_pred cEEEEEEeCCC-cccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEE
Confidence 46777888765 599999753 3689999999999999999999999999999999988888899999776 8899999
Q ss_pred EecCCce
Q psy9257 425 IRDRPLE 431 (530)
Q Consensus 425 VrR~~~e 431 (530)
|.|++.+
T Consensus 82 v~r~~~~ 88 (91)
T 2vsp_A 82 VCGKKAQ 88 (91)
T ss_dssp EEC----
T ss_pred EEeCCcc
Confidence 9987543
No 86
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.21 E-value=1.2e-10 Score=95.41 Aligned_cols=72 Identities=19% Similarity=0.362 Sum_probs=63.0
Q ss_pred CCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCC
Q psy9257 357 SGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 357 ~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~ 429 (530)
.++|||++..+ ..+++|..|.++|+|+++||+.||+|++|||+.+.++.+.++..+++.. +..+.|+|.|++
T Consensus 12 ~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g 86 (88)
T 2uzc_A 12 PAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRES 86 (88)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCC
T ss_pred CCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 45699999863 3579999999999999999999999999999999999877788888765 788999998864
No 87
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.21 E-value=6.2e-11 Score=100.74 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=69.3
Q ss_pred cceEEEeccCCCeeEEEEEecC---------CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN---------EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~---------~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
.+.|.+.|....+|||++.... .|++|..|.++|+|+ +||+.||+|++|||+.+.++.+......++ ..
T Consensus 8 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~-~~ 85 (107)
T 2h2b_A 8 QHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLR-KS 85 (107)
T ss_dssp EEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHH-TC
T ss_pred eEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhh-CC
Confidence 4577888887778999998643 499999999999999 999999999999999999998866555554 45
Q ss_pred CCeEEEEEecCCce
Q psy9257 418 VNNIRVVIRDRPLE 431 (530)
Q Consensus 418 G~~VtLtVrR~~~e 431 (530)
++.+.|+|.|+++.
T Consensus 86 g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 86 GKNAKITIRRKKGG 99 (107)
T ss_dssp CSEEEEEEEEESCC
T ss_pred CCEEEEEEEECCCC
Confidence 78899999886543
No 88
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.20 E-value=1.5e-11 Score=109.28 Aligned_cols=86 Identities=21% Similarity=0.345 Sum_probs=73.8
Q ss_pred ccccceEEEeccCCCeeEEEEEecC------CcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCAIN------EGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~~~------~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
....+.|.+.|.. .+|||++.++. .+++|..|.++++|+++ ||+.||+|++|||+.+.+++++++..+++..
T Consensus 27 ~~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 27 EATVCTVTLEKMS-AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp SEEEEEEEEETTS-SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CCcEEEEEEEcCC-CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4456677777764 56999999743 47999999999999999 8999999999999999999999999999988
Q ss_pred CCCeEEEEEecCCc
Q psy9257 417 PVNNIRVVIRDRPL 430 (530)
Q Consensus 417 ~G~~VtLtVrR~~~ 430 (530)
.+..|.|+|+|+..
T Consensus 106 ~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 106 PDGPVTIVIRRKSL 119 (130)
T ss_dssp CSSEEEEEEEEESS
T ss_pred CCceEEEEEEeCCC
Confidence 77889999988643
No 89
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=3e-11 Score=104.76 Aligned_cols=85 Identities=18% Similarity=0.195 Sum_probs=71.7
Q ss_pred ccceEEEeccCCCeeEEEEEec---------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI---------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~---------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
..+.|.+.+....+|||.+... ..|++|..|.++++|+ +||+.||+|++|||+.+.++++.++..+++.
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~- 91 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK- 91 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-
Confidence 3456777777767899999874 3579999999999997 9999999999999999999998888888877
Q ss_pred CCCeEEEEEecCCcee
Q psy9257 417 PVNNIRVVIRDRPLER 432 (530)
Q Consensus 417 ~G~~VtLtVrR~~~e~ 432 (530)
.++.|.|+|.|+....
T Consensus 92 ~~~~v~l~v~R~~~~~ 107 (117)
T 2csj_A 92 SGKIAAIVVKRPRKVQ 107 (117)
T ss_dssp SCSEEEEEEEEEEECC
T ss_pred CCCeEEEEEEECCccc
Confidence 4789999998865443
No 90
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.20 E-value=4.7e-11 Score=102.30 Aligned_cols=83 Identities=30% Similarity=0.498 Sum_probs=70.5
Q ss_pred cceEEEeccCCCeeEEEEEecC-CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN-EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~-~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.+.|.+.+.. .+|||.+.... .|++|..|.++++|+++| |+.||+|++|||+.+.+++..++..+++.. ++.|.|+
T Consensus 16 ~~~v~l~~~~-~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~ 93 (111)
T 2dlu_A 16 VEEVELINDG-SGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC-GNSVRML 93 (111)
T ss_dssp EEEEEEECCS-SCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH-CSEEEEE
T ss_pred eEEEEEEeCC-CccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEE
Confidence 3567777654 45999998754 799999999999999999 999999999999999998888888888764 6889999
Q ss_pred EecCCce
Q psy9257 425 IRDRPLE 431 (530)
Q Consensus 425 VrR~~~e 431 (530)
|+|++..
T Consensus 94 v~R~~~~ 100 (111)
T 2dlu_A 94 VARDPAG 100 (111)
T ss_dssp EEESCTT
T ss_pred EEeCCCC
Confidence 9887554
No 91
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.20 E-value=7.4e-11 Score=98.38 Aligned_cols=79 Identities=25% Similarity=0.370 Sum_probs=66.3
Q ss_pred cceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 347 IRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
.|.|.+.++. .+|||.+.. ..|++|..|.++++|+++||+.||+|++|||+.+.++.+.++...++ .++.|.|+|.
T Consensus 9 ~r~v~l~~~~-~~~G~~l~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~g~~v~l~v~ 84 (93)
T 2dls_A 9 QRCVIIQKDQ-HGFGFTVSG-DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK--SGAYVALTLL 84 (93)
T ss_dssp EEEEEEECSS-SSCCEEEEC-SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT--SSSEEEEEEE
T ss_pred CEEEEEEeCC-CceeEEEeC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc--CCCEEEEEEE
Confidence 3466677764 459999974 57999999999999999999999999999999999998866666664 4789999998
Q ss_pred cCC
Q psy9257 427 DRP 429 (530)
Q Consensus 427 R~~ 429 (530)
|++
T Consensus 85 R~~ 87 (93)
T 2dls_A 85 GSS 87 (93)
T ss_dssp CCC
T ss_pred ECC
Confidence 864
No 92
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.20 E-value=9.8e-11 Score=99.70 Aligned_cols=82 Identities=24% Similarity=0.407 Sum_probs=70.9
Q ss_pred cceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
++.|.+.+...++|||++... ..|++|..|.++|+|+++ ||+.||+|++|||+.+.+++..++..+++... ..|.
T Consensus 10 ~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~-~~v~ 88 (103)
T 2dc2_A 10 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIE 88 (103)
T ss_dssp EEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCC-SEEE
T ss_pred cEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEE
Confidence 457778787778899999874 358999999999999995 99999999999999999999989999998764 5899
Q ss_pred EEEecCC
Q psy9257 423 VVIRDRP 429 (530)
Q Consensus 423 LtVrR~~ 429 (530)
|+|.|..
T Consensus 89 l~v~~~~ 95 (103)
T 2dc2_A 89 FEVVYVA 95 (103)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9988753
No 93
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=7.9e-11 Score=99.60 Aligned_cols=81 Identities=26% Similarity=0.324 Sum_probs=68.9
Q ss_pred ceEEEeccCCCeeEEEEEec-----CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 348 RELVLCKDASGLIGLRVCAI-----NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~-----~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
+.+.+.+.. .+|||.+... ..+++|..|.++++|+++| |+.||+|++|||+.+.+++..++..+++. .+..|
T Consensus 13 ~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v 90 (104)
T 2djt_A 13 FSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQL 90 (104)
T ss_dssp EEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEE
T ss_pred EEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeE
Confidence 356666664 5699999862 5789999999999999999 99999999999999999988778888877 57889
Q ss_pred EEEEecCCc
Q psy9257 422 RVVIRDRPL 430 (530)
Q Consensus 422 tLtVrR~~~ 430 (530)
.|+|.|+++
T Consensus 91 ~l~v~R~g~ 99 (104)
T 2djt_A 91 HLVIRRPLS 99 (104)
T ss_dssp EEEECCCCC
T ss_pred EEEEEECCC
Confidence 999988654
No 94
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.19 E-value=1.6e-10 Score=98.83 Aligned_cols=81 Identities=19% Similarity=0.341 Sum_probs=68.3
Q ss_pred EEEeccCCCeeEEEEEecC------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeE
Q psy9257 350 LVLCKDASGLIGLRVCAIN------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNI 421 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~~------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~V 421 (530)
+.+.+. ..+|||.+.... .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++.. .+..|
T Consensus 15 ~~l~~~-~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v 93 (111)
T 2koj_A 15 IQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTV 93 (111)
T ss_dssp EEEECB-TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEE
T ss_pred EEEEEC-CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 334443 456999998754 689999999999999999 999999999999999999888888899875 47899
Q ss_pred EEEEecCCce
Q psy9257 422 RVVIRDRPLE 431 (530)
Q Consensus 422 tLtVrR~~~e 431 (530)
.|+|.|+++.
T Consensus 94 ~l~v~R~~~~ 103 (111)
T 2koj_A 94 SLLVFRQEEA 103 (111)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEeCCCC
Confidence 9999887543
No 95
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.1e-10 Score=96.52 Aligned_cols=82 Identities=30% Similarity=0.468 Sum_probs=69.5
Q ss_pred ccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
..|.|.+.|.. .+|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++.. +..+
T Consensus 5 ~~r~v~l~k~~-~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v 82 (93)
T 2dkr_A 5 SSGVVELPKTD-EGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA-QGSV 82 (93)
T ss_dssp CSCEEEEECCT-TCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC-CSEE
T ss_pred CCEEEEEEeCC-CCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcE
Confidence 35678887764 6699999853 4789999999999999996 999999999999999998888888888765 4679
Q ss_pred EEEEecCC
Q psy9257 422 RVVIRDRP 429 (530)
Q Consensus 422 tLtVrR~~ 429 (530)
.|+|+|++
T Consensus 83 ~l~v~r~~ 90 (93)
T 2dkr_A 83 KLVVRSGP 90 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 99998865
No 96
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.19 E-value=1.2e-10 Score=98.94 Aligned_cols=81 Identities=23% Similarity=0.426 Sum_probs=67.9
Q ss_pred ceEEEeccCCCeeEEEEEe------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 348 RELVLCKDASGLIGLRVCA------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
..|.+ +. ..+|||++.. ...|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++. .++.
T Consensus 13 ~~v~l-~~-~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~ 89 (106)
T 3axa_A 13 ITVTL-KK-QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSV 89 (106)
T ss_dssp EEEEE-EC-SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSE
T ss_pred EEEEE-CC-CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCe
Confidence 34555 44 5569999975 23689999999999999999 99999999999999999888888888866 5789
Q ss_pred EEEEEecCCce
Q psy9257 421 IRVVIRDRPLE 431 (530)
Q Consensus 421 VtLtVrR~~~e 431 (530)
|.|+|.|++..
T Consensus 90 v~l~v~R~~~~ 100 (106)
T 3axa_A 90 VTLEVAKQGAI 100 (106)
T ss_dssp EEEEEECCCSS
T ss_pred EEEEEEeCCcc
Confidence 99999987543
No 97
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.19 E-value=1.2e-10 Score=102.90 Aligned_cols=82 Identities=23% Similarity=0.382 Sum_probs=70.5
Q ss_pred ceEEEeccCCCeeEEEEEec------------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHH
Q psy9257 348 RELVLCKDASGLIGLRVCAI------------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILK 414 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~------------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk 414 (530)
+.+.+.+..+++|||.+.+. ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++
T Consensus 26 ~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 105 (123)
T 2iwq_A 26 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 105 (123)
T ss_dssp EEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56777777788999999753 2589999999999999999 9999999999999999988888999998
Q ss_pred hCCCCeEEEEEecCCc
Q psy9257 415 AAPVNNIRVVIRDRPL 430 (530)
Q Consensus 415 ~a~G~~VtLtVrR~~~ 430 (530)
.. +..+.|+|.|...
T Consensus 106 ~~-~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 106 KA-GNPVVFMVQSIIS 120 (123)
T ss_dssp HC-CSSEEEEEECCCC
T ss_pred cC-CCeEEEEEEECCc
Confidence 76 4589999988543
No 98
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=9.9e-11 Score=101.33 Aligned_cols=88 Identities=24% Similarity=0.426 Sum_probs=71.0
Q ss_pred eEEEeccCCCeeEEEEEec-CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEec
Q psy9257 349 ELVLCKDASGLIGLRVCAI-NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRD 427 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~-~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR 427 (530)
.|.+.+.. ..|||.+... +.|++|..|.++++|+++||+.||+|++|||+.+.++.+.+...++ ...++.+.|+|+|
T Consensus 22 ~v~l~~~~-~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~-~~~g~~v~l~v~r 99 (117)
T 1uit_A 22 HVKVQKGS-EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLII-GQQCDTITILAQY 99 (117)
T ss_dssp EEEEECSS-CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHT-TSCCSEEEEEECC
T ss_pred EEEEEeCC-CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH-HcCCCeEEEEEEE
Confidence 45555553 5699999875 5799999999999999999999999999999999999886555444 3567899999999
Q ss_pred CCceeeEEecc
Q psy9257 428 RPLERTVTLHR 438 (530)
Q Consensus 428 ~~~e~tVtL~k 438 (530)
+++.+++.+..
T Consensus 100 ~~~~~~~~~~~ 110 (117)
T 1uit_A 100 NPHVHQLSSHS 110 (117)
T ss_dssp CSCCCCCCCCC
T ss_pred CCchhhhhhcc
Confidence 88776655443
No 99
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.19 E-value=6.4e-11 Score=100.00 Aligned_cols=83 Identities=23% Similarity=0.380 Sum_probs=70.1
Q ss_pred ccceEEEeccCCCeeEEEEEec--CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI--NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
..|.|.+.+... +|||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++...++..+++. .++.+.|
T Consensus 6 ~~r~v~l~k~~~-g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l 83 (102)
T 2d90_A 6 SGRVVVIKKGSN-GYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTL 83 (102)
T ss_dssp SSEEEEEECCSS-SSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEE
T ss_pred CCEEEEEeeCCC-CccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEE
Confidence 346777877654 599999864 478999999999999999999999999999999999887778888876 4789999
Q ss_pred EEecCCc
Q psy9257 424 VIRDRPL 430 (530)
Q Consensus 424 tVrR~~~ 430 (530)
+|.|++.
T Consensus 84 ~v~r~~~ 90 (102)
T 2d90_A 84 LVLDKEA 90 (102)
T ss_dssp EECSTTC
T ss_pred EEEECCC
Confidence 9977543
No 100
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.19 E-value=2.2e-11 Score=106.68 Aligned_cols=92 Identities=23% Similarity=0.269 Sum_probs=75.8
Q ss_pred cceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.+.+.+.+.. .+|||.+.... .|++|..|.++|+|+++||+.||+|++|||..+.+++..++..+++...+..+.|+
T Consensus 10 ~r~v~l~~~~-~g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~ 88 (128)
T 2kjd_A 10 PRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLV 88 (128)
T ss_dssp CEEEEEECCS-SSCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEE
T ss_pred cEEEEEecCC-CcccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEE
Confidence 4556666665 45999998654 58999999999999999999999999999999999877788999988777788899
Q ss_pred EecCCceee--EEeccC
Q psy9257 425 IRDRPLERT--VTLHRD 439 (530)
Q Consensus 425 VrR~~~e~t--VtL~kd 439 (530)
|.|+++.+. +++...
T Consensus 89 v~R~g~~~~~~~~l~~~ 105 (128)
T 2kjd_A 89 VDRETDEFFKKCRVIPS 105 (128)
T ss_dssp ECHHHHHHHHHHTCCCC
T ss_pred EEeCCcceEEEEEEEec
Confidence 999776655 555443
No 101
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.18 E-value=1.9e-11 Score=105.52 Aligned_cols=88 Identities=26% Similarity=0.356 Sum_probs=72.8
Q ss_pred eEEEeccCCCeeEEEEEe--cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 349 ELVLCKDASGLIGLRVCA--INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~--~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
.+.+.+.....|||.+.. ...|++|..|.++|+|+++||+.||+|++|||+.+.+++..++..+++.. ++.|.|+|.
T Consensus 16 ~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~ 94 (114)
T 2edz_A 16 ECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVL 94 (114)
T ss_dssp EEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEE
T ss_pred EEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEE
Confidence 455555556668887775 35799999999999999999999999999999999998888888888774 899999999
Q ss_pred cCCceeeEEec
Q psy9257 427 DRPLERTVTLH 437 (530)
Q Consensus 427 R~~~e~tVtL~ 437 (530)
|+++..++++.
T Consensus 95 R~~~~~~~~~~ 105 (114)
T 2edz_A 95 DGDSYEKAVKN 105 (114)
T ss_dssp CHHHHHHHHHH
T ss_pred ECCcceehhhc
Confidence 97766655544
No 102
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.18 E-value=5.2e-11 Score=106.12 Aligned_cols=87 Identities=26% Similarity=0.486 Sum_probs=71.8
Q ss_pred cccccceEEEeccCCCeeEEEEEec------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 343 VTNGIRELVLCKDASGLIGLRVCAI------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
....++.+.+.++....|||.+.++ ..|++|..|.++++|+++| |+.||+|++|||+.+.+++++++..+++.
T Consensus 33 l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 112 (131)
T 1wfg_A 33 LNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILE 112 (131)
T ss_dssp EECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3334444555556677899999752 2389999999999999999 99999999999999999988889999988
Q ss_pred C-CCCeEEEEEecCC
Q psy9257 416 A-PVNNIRVVIRDRP 429 (530)
Q Consensus 416 a-~G~~VtLtVrR~~ 429 (530)
. .+..|.|+|.|++
T Consensus 113 ~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 113 SKPEPQVELVVSRSG 127 (131)
T ss_dssp TSSSSEEEEEEEEEC
T ss_pred cCCCCEEEEEEEcCC
Confidence 6 5688999998854
No 103
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=8.4e-11 Score=100.26 Aligned_cols=79 Identities=27% Similarity=0.443 Sum_probs=67.5
Q ss_pred eEEEeccCCCeeEEEEEe---------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 349 ELVLCKDASGLIGLRVCA---------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~---------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
.|.+.+.. .+|||++.. ...|++|..|.++++|+++| |+.||+|++|||+.+.++++.++..+++.. +
T Consensus 12 ~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 89 (107)
T 1wf8_A 12 PVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT-K 89 (107)
T ss_dssp EEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC-C
T ss_pred EEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 45555654 469999987 24689999999999999999 999999999999999999888888888774 7
Q ss_pred CeEEEEEecCC
Q psy9257 419 NNIRVVIRDRP 429 (530)
Q Consensus 419 ~~VtLtVrR~~ 429 (530)
..|.|+|.|+.
T Consensus 90 ~~v~l~v~R~~ 100 (107)
T 1wf8_A 90 GNVRFVIGREK 100 (107)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 89999998854
No 104
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.18 E-value=7.8e-11 Score=97.00 Aligned_cols=75 Identities=24% Similarity=0.316 Sum_probs=62.8
Q ss_pred cCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCC
Q psy9257 355 DASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRP 429 (530)
Q Consensus 355 ~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~ 429 (530)
....+|||.+.....|++|..|.++|+|+++||+.||+|++|||+.+.+.+..++..+++. ..+..+.|+|.|++
T Consensus 14 ~~~~~lG~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 14 GKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp TCSSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcccEEEEecCCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 3445799999877889999999999999999999999999999999955555567777764 35688999998864
No 105
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.18 E-value=1.2e-10 Score=103.01 Aligned_cols=87 Identities=25% Similarity=0.445 Sum_probs=73.0
Q ss_pred cccccceEEEeccC-CCeeEEEEEecC------------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHH
Q psy9257 343 VTNGIRELVLCKDA-SGLIGLRVCAIN------------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQ 408 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s-~G~LG~~V~~~~------------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~ 408 (530)
.....+.|.+.|.. .++|||++.... .|++|..|.++|+|+++| |+.||+|++|||+.+.+++.++
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 34556778888764 577999998542 489999999999999999 9999999999999999989988
Q ss_pred HHHHHHhCCCCeEEEEEecCCc
Q psy9257 409 VHKILKAAPVNNIRVVIRDRPL 430 (530)
Q Consensus 409 v~~LLk~a~G~~VtLtVrR~~~ 430 (530)
+..+++.. +..|.|+|+|.++
T Consensus 106 ~~~~l~~~-~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 106 VTDMMIAN-SRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHT-TTSEEEEEECCCC
T ss_pred HHHHHHcC-CCeEEEEEEECCc
Confidence 99999865 5679999988653
No 106
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.18 E-value=1.4e-10 Score=94.90 Aligned_cols=80 Identities=25% Similarity=0.406 Sum_probs=68.1
Q ss_pred cceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhh-cCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASL-VGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAak-AGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
++.+.+.+.....|||.+... ..+++|..|.++|+|++ +||+.||+|++|||+.+.++++.++..+++.. +..+.
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~ 81 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGEIE 81 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC-CSEEE
T ss_pred EEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEE
Confidence 457788887777899999864 25799999999999999 69999999999999999999998899988764 56788
Q ss_pred EEEec
Q psy9257 423 VVIRD 427 (530)
Q Consensus 423 LtVrR 427 (530)
|+|++
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87753
No 107
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=9.4e-11 Score=101.21 Aligned_cols=82 Identities=23% Similarity=0.331 Sum_probs=70.6
Q ss_pred ccceEEEeccCCCeeEEEEEecC-----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC--
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN-----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP-- 417 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~-----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~-- 417 (530)
..+.+.+.|. .+|||++.++. .+++|..|.++++|+++| |+.||+|++|||+.+.+++++++..+++...
T Consensus 15 ~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 15 AFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLR 92 (109)
T ss_dssp TEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCS
T ss_pred cEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccC
Confidence 4556777664 56999998632 379999999999999999 9999999999999999999999999999887
Q ss_pred -CCeEEEEEecCC
Q psy9257 418 -VNNIRVVIRDRP 429 (530)
Q Consensus 418 -G~~VtLtVrR~~ 429 (530)
+..++|.+.|++
T Consensus 93 ~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 93 SESPWEIAFIRSG 105 (109)
T ss_dssp SSSCEEEEEECCC
T ss_pred CCceEEEEEEeCC
Confidence 788888888764
No 108
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.18 E-value=8.4e-11 Score=96.79 Aligned_cols=80 Identities=23% Similarity=0.444 Sum_probs=67.3
Q ss_pred ceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEE
Q psy9257 348 RELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIR 422 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~Vt 422 (530)
+.|.+.+.. .+|||++.... .+++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++... +..|.
T Consensus 4 ~~v~l~~~~-~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~ 82 (90)
T 2q9v_A 4 QDIFLWRKE-TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVN 82 (90)
T ss_dssp EEEEEECBT-TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEE
T ss_pred EEEEEEECC-CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 466777765 45999998642 679999999999999999 9999999999999999888888888887654 34799
Q ss_pred EEEecC
Q psy9257 423 VVIRDR 428 (530)
Q Consensus 423 LtVrR~ 428 (530)
|+|.|+
T Consensus 83 l~v~R~ 88 (90)
T 2q9v_A 83 LTVRQT 88 (90)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998875
No 109
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=3.4e-11 Score=102.22 Aligned_cols=81 Identities=20% Similarity=0.313 Sum_probs=68.6
Q ss_pred ceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEE
Q psy9257 348 RELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIR 422 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~Vt 422 (530)
+.+.+.+. ..+|||.+... ..+++|..|.++++|+++| |+.||+|++|||+.+.+++.+++..+++... +..|.
T Consensus 11 ~~v~l~~~-~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~ 89 (103)
T 1uep_A 11 LDVHLRRM-ESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVN 89 (103)
T ss_dssp ECCEEESS-SSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEE
T ss_pred EEEEEEeC-CCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEE
Confidence 34556664 55699999863 4789999999999999999 9999999999999999988888888887754 68899
Q ss_pred EEEecCC
Q psy9257 423 VVIRDRP 429 (530)
Q Consensus 423 LtVrR~~ 429 (530)
|+|+|+.
T Consensus 90 l~v~R~~ 96 (103)
T 1uep_A 90 LTVRRKV 96 (103)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9998864
No 110
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.17 E-value=5.9e-11 Score=104.45 Aligned_cols=85 Identities=26% Similarity=0.405 Sum_probs=72.5
Q ss_pred ccceEEEeccCCCeeEEEEEecC------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcC-CcCHHHHHHHHHhCC
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVA-GYNMKQVHKILKAAP 417 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~-g~s~~~v~~LLk~a~ 417 (530)
.++.|.+.+...++|||.+.+.. .|++|..|.++++|+++| |+.||+|++|||+.+. +++..++..+++. .
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~ 103 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-T 103 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-C
T ss_pred ceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-C
Confidence 34567777877778999997532 389999999999999999 9999999999999997 8899889999987 5
Q ss_pred CCeEEEEEecCCce
Q psy9257 418 VNNIRVVIRDRPLE 431 (530)
Q Consensus 418 G~~VtLtVrR~~~e 431 (530)
+..|.|+|.|++..
T Consensus 104 ~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 104 TGSLRLIVAREPVH 117 (128)
T ss_dssp CSEEEEEEEECCCS
T ss_pred CCeEEEEEEcCCCC
Confidence 78899999987543
No 111
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=8.1e-11 Score=101.88 Aligned_cols=83 Identities=19% Similarity=0.356 Sum_probs=72.0
Q ss_pred ccceEEEeccCCCeeEEEEEecC------------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHH
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN------------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKI 412 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~------------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~L 412 (530)
..+.|.+.+.....|||.+.+.. .|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 94 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEA 94 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678888887778999997643 589999999999999999 99999999999999999998888888
Q ss_pred HHhCCCCeEEEEEecCC
Q psy9257 413 LKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 413 Lk~a~G~~VtLtVrR~~ 429 (530)
++. .+..+.|+|.|..
T Consensus 95 ~~~-~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 95 IKN-AGNPVVFIVQSLS 110 (117)
T ss_dssp HHT-SCSSEEEEECCBS
T ss_pred HHc-CCCeEEEEEEECC
Confidence 876 4788999998754
No 112
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=4.3e-11 Score=99.80 Aligned_cols=81 Identities=19% Similarity=0.271 Sum_probs=67.6
Q ss_pred EEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 350 LVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
+.+.+...++|||++.... .|++|..|.++|+|+++||+.||+|++|||+.+.++++.++..+++... ..+.|+|+
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~ 86 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLD 86 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEE
T ss_pred EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEE
Confidence 3333334567999998643 5899999999999999999999999999999999998888888888765 88999999
Q ss_pred cCCce
Q psy9257 427 DRPLE 431 (530)
Q Consensus 427 R~~~e 431 (530)
|+++.
T Consensus 87 R~g~~ 91 (94)
T 1vb7_A 87 RSSGP 91 (94)
T ss_dssp CCCCC
T ss_pred ECCcC
Confidence 97654
No 113
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.7e-10 Score=101.09 Aligned_cols=83 Identities=24% Similarity=0.251 Sum_probs=70.6
Q ss_pred ccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCe
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP-VNN 420 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~ 420 (530)
....|.+.+. ..+|||++... ..|++|..|.++++|+++| |+.||+|++|||+.+.+++.+++..+++... +..
T Consensus 19 ~~~~v~l~~~-~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~ 97 (123)
T 1ueq_A 19 TFLSTTLKKS-NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQS 97 (123)
T ss_dssp EEEEEEEECC-TTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred cEEEEEEEeC-CCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 3445666666 44599999863 3579999999999999999 9999999999999999988888999998764 789
Q ss_pred EEEEEecCC
Q psy9257 421 IRVVIRDRP 429 (530)
Q Consensus 421 VtLtVrR~~ 429 (530)
|.|+|.|+.
T Consensus 98 v~l~v~R~~ 106 (123)
T 1ueq_A 98 VNLVLCRGY 106 (123)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEeCC
Confidence 999998864
No 114
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.17 E-value=9.7e-11 Score=98.21 Aligned_cols=79 Identities=34% Similarity=0.391 Sum_probs=65.4
Q ss_pred EEEeccCCCeeEEEEEecC----------CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 350 LVLCKDASGLIGLRVCAIN----------EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~~----------~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
+.+.+. ..+|||++.... .|++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..+++. .++
T Consensus 6 v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~ 83 (99)
T 3khf_A 6 IVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLK-SGN 83 (99)
T ss_dssp EEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCS
T ss_pred EEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCC
Confidence 444453 566899988532 27799999999999999999999999999999998888888888874 578
Q ss_pred eEEEEEecCCc
Q psy9257 420 NIRVVIRDRPL 430 (530)
Q Consensus 420 ~VtLtVrR~~~ 430 (530)
.+.|+|.|.++
T Consensus 84 ~v~l~v~r~~~ 94 (99)
T 3khf_A 84 KISLRTTALEN 94 (99)
T ss_dssp EEEEEEECSCS
T ss_pred EEEEEEEECCC
Confidence 99999998654
No 115
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.6e-10 Score=98.59 Aligned_cols=82 Identities=30% Similarity=0.470 Sum_probs=69.4
Q ss_pred ccceEEEeccCCCeeEEEEEec-----------CCcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHH
Q psy9257 346 GIRELVLCKDASGLIGLRVCAI-----------NEGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKIL 413 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~-----------~~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LL 413 (530)
..++|.+.|. .++|||++... ..|++|..|.++++|+++ ||+.||+|++|||+.+.++++.++..++
T Consensus 8 ~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~ 86 (107)
T 1uhp_A 8 KSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAF 86 (107)
T ss_dssp EEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3456777776 66799999863 368999999999999999 8999999999999999999998888888
Q ss_pred HhCCCCeEEEEEecCC
Q psy9257 414 KAAPVNNIRVVIRDRP 429 (530)
Q Consensus 414 k~a~G~~VtLtVrR~~ 429 (530)
+.. +..|.|+|.|+.
T Consensus 87 ~~~-~~~v~l~v~R~~ 101 (107)
T 1uhp_A 87 KTA-KEPIVVQVLRRT 101 (107)
T ss_dssp HHC-CSSEEEEEEECC
T ss_pred HcC-CCcEEEEEEeCC
Confidence 774 678899887753
No 116
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.17 E-value=1.4e-10 Score=97.45 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=67.5
Q ss_pred eEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEec
Q psy9257 349 ELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRD 427 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR 427 (530)
.+.+.+....+|||.+.....|++|..|.++|+|+++| |+.||+|++|||+.+.++.+.++..+++.. +..|.|+|.|
T Consensus 11 ~v~l~~~~~~glG~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~R 89 (96)
T 2qkv_A 11 NVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA-NGKVSMEVTR 89 (96)
T ss_dssp EEEEECBTTBCCCEEEEECSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEEC
T ss_pred EEEEEeCCCCCccEEEEeCCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCcEEEEEEe
Confidence 55566656667999988767899999999999999999 999999999999999998887777777664 5679999887
Q ss_pred C
Q psy9257 428 R 428 (530)
Q Consensus 428 ~ 428 (530)
.
T Consensus 90 ~ 90 (96)
T 2qkv_A 90 P 90 (96)
T ss_dssp C
T ss_pred C
Confidence 4
No 117
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.16 E-value=2.4e-10 Score=97.85 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=67.7
Q ss_pred cCCCeeEEEEEecC--------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEE
Q psy9257 355 DASGLIGLRVCAIN--------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVI 425 (530)
Q Consensus 355 ~s~G~LG~~V~~~~--------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtV 425 (530)
.....|||++.++. .|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++.. +..|.|+|
T Consensus 10 ~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v 88 (106)
T 4amh_A 10 RGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT-SDFVYLKV 88 (106)
T ss_dssp --CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC-CSEEEEEE
T ss_pred CCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEE
Confidence 45667999998642 389999999999999999 999999999999999999988888888764 67899999
Q ss_pred ecCCc---eeeEEecc
Q psy9257 426 RDRPL---ERTVTLHR 438 (530)
Q Consensus 426 rR~~~---e~tVtL~k 438 (530)
.|++. .++++|.+
T Consensus 89 ~R~~~~~~~~~v~l~~ 104 (106)
T 4amh_A 89 AKPGSGEKIMEIKLIK 104 (106)
T ss_dssp ECCSSSCSEEEEEEEC
T ss_pred EeCCCCCeEEEEEEec
Confidence 98653 34455544
No 118
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.16 E-value=1.8e-10 Score=101.01 Aligned_cols=80 Identities=25% Similarity=0.442 Sum_probs=70.0
Q ss_pred cceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
.+.+.+.+...++|||.+.++. .+++|..|.+||+|+++| |+.||+|++|||+.+.++++.++..+++... ..|.
T Consensus 20 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~-~~v~ 98 (125)
T 3hpk_A 20 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVT 98 (125)
T ss_dssp EEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSC-SEEE
T ss_pred CeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEE
Confidence 3467778888888999998743 579999999999999999 9999999999999999999988999998854 5699
Q ss_pred EEEec
Q psy9257 423 VVIRD 427 (530)
Q Consensus 423 LtVrR 427 (530)
|+|+|
T Consensus 99 l~v~r 103 (125)
T 3hpk_A 99 IHYNK 103 (125)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99887
No 119
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.16 E-value=1.3e-10 Score=95.42 Aligned_cols=80 Identities=21% Similarity=0.316 Sum_probs=64.8
Q ss_pred cceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRV 423 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtL 423 (530)
++.|.+.|.. .+|||++.... .|++|..| ++|+|+ +||+.||+|++|||+.+.+++.+++..+++. ..++.+.|
T Consensus 4 ~~~v~l~k~~-~g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 80 (88)
T 3bpu_A 4 LITVHIVKGP-MGFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTL 80 (88)
T ss_dssp EEEEEEECBT-TBSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEEEcCC-CceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEE
Confidence 4567777765 55999998653 68888887 999999 9999999999999999999987778888874 46789999
Q ss_pred EEecCC
Q psy9257 424 VIRDRP 429 (530)
Q Consensus 424 tVrR~~ 429 (530)
+|.|++
T Consensus 81 ~v~R~g 86 (88)
T 3bpu_A 81 LVQRQT 86 (88)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 998864
No 120
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.16 E-value=1.7e-10 Score=100.50 Aligned_cols=82 Identities=24% Similarity=0.276 Sum_probs=69.8
Q ss_pred cccceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
...|.|.+.|+ .++|||.+. ...+++|..|.++|+|+++||+.||+|++|||+.+.+|+.+++..+++...+..|.|+
T Consensus 22 ~~~r~v~l~k~-~~~~G~~l~-~~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 22 SMPRSIRFTAE-EGDLGFTLR-GNAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp HSCEEEEECCG-GGCCCEEEE-SSSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CCCEEEEEEeC-CCceeEEEe-CCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 45567888885 456899986 4578999999999999999999999999999999998887778888887666669999
Q ss_pred EecC
Q psy9257 425 IRDR 428 (530)
Q Consensus 425 VrR~ 428 (530)
|.|.
T Consensus 100 V~~~ 103 (109)
T 2vsv_A 100 VVSL 103 (109)
T ss_dssp EESC
T ss_pred EEEC
Confidence 8875
No 121
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.16 E-value=2.1e-10 Score=99.36 Aligned_cols=84 Identities=30% Similarity=0.547 Sum_probs=71.0
Q ss_pred ccccceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
....+.|.+.+... +|||.+.... .|++|..|.++|+|+++| |+.||+|++|||+.+.++.+.++..+++. .+..
T Consensus 12 ~~~~~~v~l~k~~~-glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~ 89 (119)
T 1tp5_A 12 PREPRRIVIHRGST-GLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQT 89 (119)
T ss_dssp CCSCEEEEEECTTS-CCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSE
T ss_pred CCccEEEEEEECCC-CccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCe
Confidence 34567788888654 4999999765 799999999999999999 99999999999999999988767777755 5688
Q ss_pred EEEEEecCC
Q psy9257 421 IRVVIRDRP 429 (530)
Q Consensus 421 VtLtVrR~~ 429 (530)
+.|+|.|++
T Consensus 90 v~l~v~r~~ 98 (119)
T 1tp5_A 90 VTIIAQYKP 98 (119)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECC
Confidence 999998864
No 122
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=6.5e-11 Score=100.29 Aligned_cols=81 Identities=19% Similarity=0.285 Sum_probs=68.9
Q ss_pred CCeeEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceee
Q psy9257 357 SGLIGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERT 433 (530)
Q Consensus 357 ~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~t 433 (530)
...|||++..+. .+++|..|.++|+|+++||+.||+|++|||+.+.++++.++..+++.. ++.+.|+|.|+++.++
T Consensus 14 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~~~~ 92 (103)
T 1wf7_A 14 PAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQRASAAAK 92 (103)
T ss_dssp SSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECCCSCCCC
T ss_pred CCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCCcCC
Confidence 466999998643 468999999999999999999999999999999999877777777765 7889999999887777
Q ss_pred EEecc
Q psy9257 434 VTLHR 438 (530)
Q Consensus 434 VtL~k 438 (530)
+++..
T Consensus 93 ~~v~p 97 (103)
T 1wf7_A 93 SEPVS 97 (103)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 66644
No 123
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.15 E-value=2.7e-10 Score=99.87 Aligned_cols=74 Identities=16% Similarity=0.351 Sum_probs=64.6
Q ss_pred CCCeeEEEEEecC------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeEEEEEec
Q psy9257 356 ASGLIGLRVCAIN------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNIRVVIRD 427 (530)
Q Consensus 356 s~G~LG~~V~~~~------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~VtLtVrR 427 (530)
...+|||.+.... .|++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++.. .+..|.|+|.|
T Consensus 39 ~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 118 (121)
T 2kom_A 39 GTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFR 118 (121)
T ss_dssp CTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEE
T ss_pred CCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEe
Confidence 3556899998754 689999999999999999 999999999999999998877888888875 47889999988
Q ss_pred CC
Q psy9257 428 RP 429 (530)
Q Consensus 428 ~~ 429 (530)
++
T Consensus 119 ~g 120 (121)
T 2kom_A 119 QE 120 (121)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 124
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.15 E-value=2.2e-10 Score=94.82 Aligned_cols=78 Identities=22% Similarity=0.476 Sum_probs=66.1
Q ss_pred EEEeccCCCeeEEEEEec-------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 350 LVLCKDASGLIGLRVCAI-------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~-------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
+.+.+. ..+|||.+... ..|++|..|.++++|+++| |+.||+|++|||+.+.+++..++..+++. .+..+
T Consensus 8 v~l~~~-~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v 85 (97)
T 2iwn_A 8 VELTKN-VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTV 85 (97)
T ss_dssp EEEECB-TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEE
T ss_pred EEEecC-CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeE
Confidence 444443 55699999875 4689999999999999999 99999999999999999988778888776 67899
Q ss_pred EEEEecCC
Q psy9257 422 RVVIRDRP 429 (530)
Q Consensus 422 tLtVrR~~ 429 (530)
.|+|.|++
T Consensus 86 ~l~v~r~g 93 (97)
T 2iwn_A 86 LLTLMRRG 93 (97)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 99998764
No 125
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.15 E-value=1.9e-10 Score=101.76 Aligned_cols=80 Identities=28% Similarity=0.306 Sum_probs=68.4
Q ss_pred eEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEEE
Q psy9257 349 ELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIRV 423 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~VtL 423 (530)
.|.+.+. ..+|||++.+.. .|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++... ++.|.|
T Consensus 21 ~v~l~~~-~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 99 (129)
T 2kpk_A 21 HTKLRKS-SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 99 (129)
T ss_dssp EEEEEEC-SSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEE
T ss_pred EEEEEEC-CCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 5566665 446999998733 469999999999999999 9999999999999999998888999998876 788999
Q ss_pred EEecCC
Q psy9257 424 VIRDRP 429 (530)
Q Consensus 424 tVrR~~ 429 (530)
+|.|+.
T Consensus 100 ~v~R~~ 105 (129)
T 2kpk_A 100 ELCRGY 105 (129)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 998864
No 126
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=102.12 Aligned_cols=87 Identities=24% Similarity=0.411 Sum_probs=72.6
Q ss_pred cccccceEEEeccCCCeeEEEEEec----CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 343 VTNGIRELVLCKDASGLIGLRVCAI----NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s~G~LG~~V~~~----~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
+...++.|.+.+. ..+|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++..
T Consensus 22 ~~~~~~~v~l~k~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~- 99 (124)
T 2daz_A 22 LPGELHIIELEKD-KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA- 99 (124)
T ss_dssp SSSEEEEEEEECC-SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS-
T ss_pred CCCceEEEEEEeC-CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3444567777776 45699999875 2589999999999999999 999999999999999999988888888775
Q ss_pred CCeEEEEEecCCce
Q psy9257 418 VNNIRVVIRDRPLE 431 (530)
Q Consensus 418 G~~VtLtVrR~~~e 431 (530)
+..|.|+|.|++..
T Consensus 100 ~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 100 PSKVKLVFIRNEDA 113 (124)
T ss_dssp CSEEEEEEEECTTH
T ss_pred CCeEEEEEEeCCCc
Confidence 46899999887654
No 127
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.14 E-value=6.7e-11 Score=104.74 Aligned_cols=82 Identities=28% Similarity=0.409 Sum_probs=69.5
Q ss_pred eEEEeccCCCeeEEEEEecC-------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC----
Q psy9257 349 ELVLCKDASGLIGLRVCAIN-------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA---- 416 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~-------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a---- 416 (530)
.+.+.+....+|||++.... .|++|..|.++++|+++| |+.||+|++|||+.+.++++.++..+++..
T Consensus 28 ~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 107 (127)
T 1wg6_A 28 EIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSME 107 (127)
T ss_dssp EEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccc
Confidence 44455456777999998643 489999999999999999 999999999999999999988899999864
Q ss_pred --CCCeEEEEEecCCc
Q psy9257 417 --PVNNIRVVIRDRPL 430 (530)
Q Consensus 417 --~G~~VtLtVrR~~~ 430 (530)
.+..|.|+|.|+..
T Consensus 108 g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 108 GNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHTCEEEEEEEECSC
T ss_pred cCCCCEEEEEEEeCCC
Confidence 46899999988643
No 128
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.5e-10 Score=101.77 Aligned_cols=96 Identities=23% Similarity=0.295 Sum_probs=79.7
Q ss_pred CCCCeEEEEEecCCceeeEEeccCCCCccceeecc------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHH
Q psy9257 416 APVNNIRVVIRDRPLERTVTLHRDSSGHFGFHFNK------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKE 488 (530)
Q Consensus 416 a~G~~VtLtVrR~~~e~tVtL~kd~~g~LGfs~~~------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~ee 488 (530)
..++.|.|+|.|+++++++++.......|||.+.. |. |..|.++++|+++||+.||+|++|||+++.++.+.+
T Consensus 6 ~~g~~v~l~v~R~g~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~ 85 (128)
T 1uf1_A 6 SGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDE 85 (128)
T ss_dssp STTTSCCSCCCCCSSEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHH
T ss_pred CCCCEEEEEEEeCCcEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH
Confidence 35678889999988888888887655679998865 43 889999999999999999999999999999998777
Q ss_pred HHHHHHhCCCEEEEEEEeCcchhh
Q psy9257 489 LLEAMEKGGSVLTLTLIPTSMYQH 512 (530)
Q Consensus 489 Vv~iLkrsG~tVtLtVip~~~~e~ 512 (530)
+...++. ++.+.|+|.|......
T Consensus 86 ~~~~~~~-~~~v~l~v~R~g~~~~ 108 (128)
T 1uf1_A 86 AVRLLKS-SRHLILTVKDVGRLPH 108 (128)
T ss_dssp HHHHHTT-CSEEEEEEECCSCCSS
T ss_pred HHHHHhc-CCeEEEEEEECCcccc
Confidence 7777765 5799999998765433
No 129
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=4.1e-11 Score=102.86 Aligned_cols=84 Identities=25% Similarity=0.441 Sum_probs=72.5
Q ss_pred cccceEEEeccCCCeeEEEEEecC------------CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHH
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAIN------------EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHK 411 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~~------------~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~ 411 (530)
...+.|.+.+...+.|||.+.... .|++|..|.++++|+++| |+.||+|++|||+.+.+++..++..
T Consensus 8 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 8 PGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp CSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred CccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 446678888887788999999643 479999999999999999 9999999999999999988888888
Q ss_pred HHHhCCCCeEEEEEecCC
Q psy9257 412 ILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 412 LLk~a~G~~VtLtVrR~~ 429 (530)
+++. .+..|.|+|.|+.
T Consensus 88 ~l~~-~g~~v~l~v~r~~ 104 (111)
T 1uju_A 88 LLRS-VGDTLTVLVCDGF 104 (111)
T ss_dssp HHSS-CSSEEEECCCCCC
T ss_pred HHHc-CCCeEEEEEEECC
Confidence 8866 5788999888753
No 130
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.13 E-value=3.8e-10 Score=92.87 Aligned_cols=78 Identities=19% Similarity=0.385 Sum_probs=59.9
Q ss_pred cCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceee
Q psy9257 355 DASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERT 433 (530)
Q Consensus 355 ~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~t 433 (530)
.....|||.+. .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++... ..+.|+|.|+++.++
T Consensus 12 ~~~~~~g~~~~---~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~g~~~~ 87 (92)
T 3cyy_A 12 AKNEEYGLRLA---SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRDERATL 87 (92)
T ss_dssp STTSCCCEEEE---EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEC------
T ss_pred CCCCCCCEEEe---CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEeCCceee
Confidence 34456888876 689999999999999999 9999999999999999777777888887754 589999999877766
Q ss_pred EEe
Q psy9257 434 VTL 436 (530)
Q Consensus 434 VtL 436 (530)
+.+
T Consensus 88 ~~v 90 (92)
T 3cyy_A 88 LNV 90 (92)
T ss_dssp ---
T ss_pred eeC
Confidence 554
No 131
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=8.3e-11 Score=99.78 Aligned_cols=85 Identities=20% Similarity=0.345 Sum_probs=70.9
Q ss_pred cccceEEEeccCCCeeEEEEEec--CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAI--NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~--~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
...|.|.+.|. .++|||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++++.++..+++.. +..+.
T Consensus 7 ~~~r~v~l~k~-~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~ 84 (106)
T 2eei_A 7 GQPRLCYLVKE-GGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKS-GSRVM 84 (106)
T ss_dssp SSSEEEEEECC-SSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHH-CSEEE
T ss_pred CCCEEEEEEEC-CCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEE
Confidence 34567888885 56699999753 4689999999999999999999999999999999998888888887654 67899
Q ss_pred EEEecCCce
Q psy9257 423 VVIRDRPLE 431 (530)
Q Consensus 423 LtVrR~~~e 431 (530)
|+|.|++..
T Consensus 85 l~v~r~~~~ 93 (106)
T 2eei_A 85 FLLVDKETD 93 (106)
T ss_dssp EEECCTTTS
T ss_pred EEEEcCchh
Confidence 999886543
No 132
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.13 E-value=1.4e-10 Score=99.82 Aligned_cols=89 Identities=25% Similarity=0.395 Sum_probs=72.8
Q ss_pred ceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 348 RELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
+++.+.+....+|||++... ..|++|..|.++++|+++||+.||+|++|||+.+.++.+.++..+++.. ..+.|+
T Consensus 17 ~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~ 94 (114)
T 1x5n_A 17 KKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTIS 94 (114)
T ss_dssp EEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEE
T ss_pred EEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEE
Confidence 46666565667799999864 3689999999999999999999999999999999999877777777664 578999
Q ss_pred EecC-CceeeEEecc
Q psy9257 425 IRDR-PLERTVTLHR 438 (530)
Q Consensus 425 VrR~-~~e~tVtL~k 438 (530)
|.|+ ++.+.+.+..
T Consensus 95 v~r~~g~~~~~~~~~ 109 (114)
T 1x5n_A 95 IVAAAGRELFMTDRS 109 (114)
T ss_dssp ECSSTTTHHHHSSCC
T ss_pred EEcCCCCceEEEecc
Confidence 9887 6665555443
No 133
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.12 E-value=1.9e-10 Score=101.62 Aligned_cols=76 Identities=25% Similarity=0.339 Sum_probs=65.6
Q ss_pred CCeeEEEEEe-cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCcee
Q psy9257 357 SGLIGLRVCA-INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLER 432 (530)
Q Consensus 357 ~G~LG~~V~~-~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~ 432 (530)
...|||.+.. ...|++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..+++. ..++.+.|+|.|++++.
T Consensus 38 ~~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~ 115 (124)
T 3tsv_A 38 GDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVY 115 (124)
T ss_dssp SSCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHHH
T ss_pred CCceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCchh
Confidence 4679999986 4579999999999999999999999999999999999987777776665 56789999999876543
No 134
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=1.3e-10 Score=99.09 Aligned_cols=82 Identities=23% Similarity=0.380 Sum_probs=68.5
Q ss_pred ceEEEeccCCCeeEEEEE-----e------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 348 RELVLCKDASGLIGLRVC-----A------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~-----~------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
++|.+.+.. .+|||.+. + ...|++|..|.++|+|+++| |+.||+|++|||+.+.++++.++..+++.
T Consensus 11 ~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 89 (108)
T 1q7x_A 11 FEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 89 (108)
T ss_dssp EEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHH
T ss_pred EEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456666653 56999998 3 24689999999999999999 99999999999999998777778888877
Q ss_pred CCCCeEEEEEecCCce
Q psy9257 416 APVNNIRVVIRDRPLE 431 (530)
Q Consensus 416 a~G~~VtLtVrR~~~e 431 (530)
. +..|.|+|.|++..
T Consensus 90 ~-g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 90 T-GQVVHLLLEKGQSP 104 (108)
T ss_dssp T-TSEEEEEEECCCCS
T ss_pred C-CCeEEEEEEeCCcc
Confidence 4 78999999987654
No 135
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=99.12 E-value=2.3e-12 Score=130.58 Aligned_cols=130 Identities=21% Similarity=0.286 Sum_probs=28.3
Q ss_pred hhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEE--------Ee--ccCCCeeEEEEEe----
Q psy9257 301 ENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELV--------LC--KDASGLIGLRVCA---- 366 (530)
Q Consensus 301 ~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~--------L~--K~s~G~LG~~V~~---- 366 (530)
+++++++|++++++++..|+..++...... .|++||++.+.++.+. .+ +..+++||+.+..
T Consensus 163 ~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~ 237 (332)
T 3num_A 163 TDAIINYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSS 237 (332)
T ss_dssp ESSCCCTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC------------------------
T ss_pred EECCcCCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHH
Confidence 567777888777777666666555433222 4678888655544332 11 2346889988753
Q ss_pred --------------cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCcee
Q psy9257 367 --------------INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLER 432 (530)
Q Consensus 367 --------------~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~ 432 (530)
...|++|..|.++|||+++||+.||+|++|||+.+.++.+ +..+++. ++.|+|+|+|+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~~--~~~v~l~v~R~g~~~ 313 (332)
T 3num_A 238 KAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSAND--VSDVIKR--ESTLNMVVRRGNEDI 313 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHH--HHHHHhC--CCeEEEEEEECCEEE
Confidence 1368999999999999999999999999999999988765 5566654 678999999998888
Q ss_pred eEEeccC
Q psy9257 433 TVTLHRD 439 (530)
Q Consensus 433 tVtL~kd 439 (530)
++++...
T Consensus 314 ~~~v~p~ 320 (332)
T 3num_A 314 MITVIPE 320 (332)
T ss_dssp -------
T ss_pred EEEEEEe
Confidence 7777543
No 136
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.12 E-value=1.5e-10 Score=99.64 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=67.7
Q ss_pred eEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEec
Q psy9257 349 ELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRD 427 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR 427 (530)
+|.+.+....+|||.+.....|++|..|.+||+|+++| |+.||+|++|||+.+.+..+.++..+++.. +..|.|+|.|
T Consensus 5 ~v~L~k~~~~glG~~i~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~R 83 (106)
T 2la8_A 5 NVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA-NGKVSMEVTR 83 (106)
T ss_dssp EEEECCBSSSTTCCEEEECSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSC-BSCEEEEEEE
T ss_pred EEEEEeCCCCccCEEEEeCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEEEe
Confidence 56666666667999988767899999999999999999 999999999999999998887777777664 5679999887
Q ss_pred C
Q psy9257 428 R 428 (530)
Q Consensus 428 ~ 428 (530)
.
T Consensus 84 ~ 84 (106)
T 2la8_A 84 P 84 (106)
T ss_dssp C
T ss_pred C
Confidence 4
No 137
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.12 E-value=3.7e-10 Score=98.37 Aligned_cols=81 Identities=25% Similarity=0.428 Sum_probs=68.7
Q ss_pred cceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
.+.|.+.++..++|||++.... .+++|..|.++|+|+++| |+.||+|++|||+.+.+.+.+++..+++... ..|.
T Consensus 25 ~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~~v~ 103 (114)
T 2gzv_A 25 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVT 103 (114)
T ss_dssp CEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEE
T ss_pred CEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEE
Confidence 4578888888888999998754 369999999999999999 9999999999999997777777888887654 5688
Q ss_pred EEEecC
Q psy9257 423 VVIRDR 428 (530)
Q Consensus 423 LtVrR~ 428 (530)
|+|++.
T Consensus 104 l~v~~~ 109 (114)
T 2gzv_A 104 IHYNKL 109 (114)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 887653
No 138
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.12 E-value=4.9e-11 Score=96.96 Aligned_cols=79 Identities=29% Similarity=0.466 Sum_probs=66.9
Q ss_pred cceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 347 IRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
.+.|.+.+.. .+|||.+.. ..|++|..|.++|+|+++||+.||+|++|||+.+.+++++++..+++.. +..+.|+|.
T Consensus 3 ~r~v~l~~~~-~g~G~~~~~-~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~ 79 (83)
T 2kv8_A 3 VRSVEVARGR-AGYGFTLSG-QAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC-SGVLHMVIA 79 (83)
T ss_dssp EEEEEECCCS-SCCSCBCCC-SSSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC-SSCEEEEEE
T ss_pred cEEEEEEeCC-CcccEEEEc-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEE
Confidence 4677787776 458998864 5689999999999999999999999999999999999877788888654 567899988
Q ss_pred cC
Q psy9257 427 DR 428 (530)
Q Consensus 427 R~ 428 (530)
|+
T Consensus 80 R~ 81 (83)
T 2kv8_A 80 EG 81 (83)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 139
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.12 E-value=1e-10 Score=100.73 Aligned_cols=84 Identities=21% Similarity=0.323 Sum_probs=69.5
Q ss_pred ceEEEeccCCCeeEEEEEecC----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 348 RELVLCKDASGLIGLRVCAIN----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 348 r~V~L~K~s~G~LG~~V~~~~----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
+.+.+.+. ..+|||.+.... .|++|..|.++++|+++| |+.||+|++|||+.+.+++..++..+++... ..|.
T Consensus 19 ~~v~l~~~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~ 96 (116)
T 2dm8_A 19 MIIEISKG-RSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP-QKVR 96 (116)
T ss_dssp EEEEEECC-SSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-SEEE
T ss_pred EEEEEEEC-CCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEE
Confidence 35555554 456999998644 599999999999999999 9999999999999999998888888887654 8899
Q ss_pred EEEecCCceee
Q psy9257 423 VVIRDRPLERT 433 (530)
Q Consensus 423 LtVrR~~~e~t 433 (530)
|+|.|++..+.
T Consensus 97 l~v~R~~~~~~ 107 (116)
T 2dm8_A 97 LVVYRDEAHYR 107 (116)
T ss_dssp EEEECCSSCCC
T ss_pred EEEEeCCcccc
Confidence 99998765443
No 140
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.12 E-value=3e-10 Score=106.17 Aligned_cols=78 Identities=22% Similarity=0.410 Sum_probs=67.9
Q ss_pred eEEEeccCCCeeEEEEEe---------cCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 349 ELVLCKDASGLIGLRVCA---------INEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~---------~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
.|.+.|+. .+|||++.. ...|++|..|.+|++|+++| |+.||+|++|||+.+.++++.++..+++. .+
T Consensus 83 ~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g 160 (170)
T 3egg_C 83 PVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TK 160 (170)
T ss_dssp EEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CC
T ss_pred EEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 46666665 469999987 23689999999999999999 99999999999999999999999999988 56
Q ss_pred CeEEEEEecC
Q psy9257 419 NNIRVVIRDR 428 (530)
Q Consensus 419 ~~VtLtVrR~ 428 (530)
..|.|+|+|+
T Consensus 161 ~~v~L~V~R~ 170 (170)
T 3egg_C 161 GRVRFMIGRE 170 (170)
T ss_dssp SEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 8999999873
No 141
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.12 E-value=2.3e-10 Score=107.54 Aligned_cols=84 Identities=25% Similarity=0.447 Sum_probs=73.7
Q ss_pred cccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI 421 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V 421 (530)
..++.|.+.+...++|||.+.++ ..|++|..|.+||+|+++||+.||+|++|||..|.+++.+++..+++. +..|
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v 160 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTV 160 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEE
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeE
Confidence 45667888887677899999865 468999999999999999999999999999999999888888888866 7899
Q ss_pred EEEEecCCc
Q psy9257 422 RVVIRDRPL 430 (530)
Q Consensus 422 tLtVrR~~~ 430 (530)
.|+|+|.++
T Consensus 161 ~l~v~r~g~ 169 (192)
T 3k1r_A 161 SIKVRHIGL 169 (192)
T ss_dssp EEEEEECCE
T ss_pred EEEEEECCc
Confidence 999999764
No 142
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.12 E-value=5.4e-10 Score=92.30 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=68.7
Q ss_pred ceeeEEeccCCCCccceeeccC-----c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-----Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-----v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
+.++++|.+.....|||.+.++ . |..|.++|+|+++| |+.||+|++|||+++.++..+++..++++.++.+.|
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 83 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTL 83 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred eEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 3566777777667799998643 3 89999999999999 999999999999999999888999999988999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.|..
T Consensus 84 ~v~R~~ 89 (92)
T 2qg1_A 84 EVGRIS 89 (92)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 998875
No 143
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=4.4e-10 Score=94.75 Aligned_cols=79 Identities=25% Similarity=0.285 Sum_probs=67.5
Q ss_pred eEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEEEEEec
Q psy9257 349 ELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIRVVIRD 427 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~VtLtVrR 427 (530)
.+.+.+.. .+|||.+.....|++|..|.++ |+++||+.||+|++|||+.+.+++++++.++++..+ ++.|.|+|+|
T Consensus 13 ~v~l~~~~-~g~G~~i~~~~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 89 (96)
T 1ujv_A 13 TLTIVKGA-QGFGFTIADSPTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHR 89 (96)
T ss_dssp EEEEECCS-SSSSEEEEEETTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEEC
T ss_pred EEEEEeCC-CceeEEEEcCCCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEE
Confidence 45566654 5699999877779999999983 789999999999999999999998888999998875 8899999998
Q ss_pred CCc
Q psy9257 428 RPL 430 (530)
Q Consensus 428 ~~~ 430 (530)
++.
T Consensus 90 ~g~ 92 (96)
T 1ujv_A 90 GSG 92 (96)
T ss_dssp CSS
T ss_pred CCC
Confidence 754
No 144
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=2.6e-10 Score=98.44 Aligned_cols=84 Identities=19% Similarity=0.290 Sum_probs=71.5
Q ss_pred cceEEEeccCCCeeEEEEEecC----------CcEEEEEeccCCHhhh-cCCCCCCEEEEECCEEcCCcCHHHHHHHHHh
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN----------EGVFVCLVERGSPASL-VGLRFGDQILSINGETVAGYNMKQVHKILKA 415 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~----------~GV~Vs~V~pGSPAak-AGLq~GDqILaING~~V~g~s~~~v~~LLk~ 415 (530)
.+.|.+.+....+|||.+.... .+++|..|.++|+|++ +||+.||+|++|||+.+.++..+++..+++.
T Consensus 11 ~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 90 (114)
T 1uew_A 11 TSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD 90 (114)
T ss_dssp CEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4577787766778999998531 1569999999999999 9999999999999999999888889999987
Q ss_pred CCCCeEEEEEecCCce
Q psy9257 416 APVNNIRVVIRDRPLE 431 (530)
Q Consensus 416 a~G~~VtLtVrR~~~e 431 (530)
.+..|.|+|+|+++.
T Consensus 91 -~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 91 -AGLSVTLRIIPQEEL 105 (114)
T ss_dssp -TTTEEEEEECCCSCC
T ss_pred -CCCeEEEEEEeCCcC
Confidence 688999999987644
No 145
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=1.6e-10 Score=98.25 Aligned_cols=79 Identities=27% Similarity=0.463 Sum_probs=66.8
Q ss_pred eEEEeccCCCeeEEEEEec---------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 349 ELVLCKDASGLIGLRVCAI---------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~---------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
.+.+.+... +|||++... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++.. +
T Consensus 10 ~v~l~~~~~-glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g 87 (105)
T 1wha_A 10 VACLARSER-GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-S 87 (105)
T ss_dssp EEEECCCTT-CCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-C
T ss_pred EEEEEeCCC-ccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 455555544 499999863 3689999999999999999 999999999999999998888888888665 7
Q ss_pred CeEEEEEecCC
Q psy9257 419 NNIRVVIRDRP 429 (530)
Q Consensus 419 ~~VtLtVrR~~ 429 (530)
..|.|+|.|+.
T Consensus 88 ~~v~l~v~R~~ 98 (105)
T 1wha_A 88 PTIALLLEREA 98 (105)
T ss_dssp SCEEEEEEECC
T ss_pred CeEEEEEEECC
Confidence 88999998864
No 146
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.11 E-value=2.5e-10 Score=98.08 Aligned_cols=81 Identities=28% Similarity=0.400 Sum_probs=65.7
Q ss_pred cCCCeeEEEEEec------------------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 355 DASGLIGLRVCAI------------------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 355 ~s~G~LG~~V~~~------------------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
..+++||+.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++. ++..+++.
T Consensus 3 v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~- 79 (113)
T 2pzd_A 3 HMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAE--DVYEAVRT- 79 (113)
T ss_dssp --CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHH--HHHHHHHH-
T ss_pred ccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHH--HHHHHHhC-
Confidence 4567788877652 36899999999999999999999999999999998754 46677765
Q ss_pred CCCeEEEEEecCCceeeEEeccC
Q psy9257 417 PVNNIRVVIRDRPLERTVTLHRD 439 (530)
Q Consensus 417 ~G~~VtLtVrR~~~e~tVtL~kd 439 (530)
++.+.|+|.|+++.+++++...
T Consensus 80 -~~~v~l~v~R~g~~~~~~v~~~ 101 (113)
T 2pzd_A 80 -QSQLAVQIRRGRETLTLYVTPE 101 (113)
T ss_dssp -CSSEEEEEEETTEEEEEEECCE
T ss_pred -CCeEEEEEEECCEEEEEEEEEe
Confidence 5789999999988887777543
No 147
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.11 E-value=5.5e-10 Score=93.42 Aligned_cols=78 Identities=27% Similarity=0.477 Sum_probs=68.6
Q ss_pred ceeeEEeccCCCCccceeecc-------------C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-------------G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-------------G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
+.++|+|.+...+.|||.+.. | .|..|.++++|+++||+.||+|++|||+++.+++.+++..+|++
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 83 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKA 83 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 557788888877789999874 1 38899999999999999999999999999999988999999998
Q ss_pred CCCEEEEEEEeC
Q psy9257 496 GGSVLTLTLIPT 507 (530)
Q Consensus 496 sG~tVtLtVip~ 507 (530)
.++.+.|+|.+.
T Consensus 84 ~~~~v~l~v~~~ 95 (96)
T 2ego_A 84 SGNVLRLETLYG 95 (96)
T ss_dssp TTTEEEEEEECC
T ss_pred CCCeEEEEEEEC
Confidence 888999999764
No 148
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.10 E-value=2.5e-10 Score=100.36 Aligned_cols=82 Identities=17% Similarity=0.352 Sum_probs=72.3
Q ss_pred CceeeEEeccCCCCccceeeccC----------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNKG----------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~G----------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
...++|.|.++..+.|||.+.+| .|..|.++|+|+++| |+.||+|++|||+++.+++.+++..++++.+
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 102 (118)
T 3b76_A 23 MHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS 102 (118)
T ss_dssp EEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred CCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35677888888777899999765 388999999999999 9999999999999999999999999999999
Q ss_pred CEEEEEEEeCcch
Q psy9257 498 SVLTLTLIPTSMY 510 (530)
Q Consensus 498 ~tVtLtVip~~~~ 510 (530)
+.++|+|.|....
T Consensus 103 ~~v~L~v~R~~~~ 115 (118)
T 3b76_A 103 SSIVLKALEVKEG 115 (118)
T ss_dssp SEEEEEEEEEEEC
T ss_pred CeEEEEEEECCCc
Confidence 9999999886543
No 149
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1.3e-10 Score=102.07 Aligned_cols=87 Identities=24% Similarity=0.402 Sum_probs=70.7
Q ss_pred EEEec-cCCCeeEEEEEecC-----CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 350 LVLCK-DASGLIGLRVCAIN-----EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 350 V~L~K-~s~G~LG~~V~~~~-----~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
+.+.+ ....+|||.+.... .|++|..|.++++|+++| |+.||+|++|||+.|.++ .++..+++...+..|.
T Consensus 23 ~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~ 100 (124)
T 1wh1_A 23 VDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNR--EEAVALLTSEENKNFS 100 (124)
T ss_dssp BCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSH--HHHHHHHTCSSCCSCC
T ss_pred EEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCEEE
Confidence 33433 44567999998764 789999999999999999 999999999999999875 4578888776678999
Q ss_pred EEEecCCceeeEEecc
Q psy9257 423 VVIRDRPLERTVTLHR 438 (530)
Q Consensus 423 LtVrR~~~e~tVtL~k 438 (530)
|+|.|+++.+++....
T Consensus 101 l~v~R~g~~~~~~~~~ 116 (124)
T 1wh1_A 101 LLIARPELQLDEGWMD 116 (124)
T ss_dssp EEEEECSSCCCCCCCC
T ss_pred EEEEECCEEeecccCC
Confidence 9999988776655443
No 150
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.10 E-value=3.5e-10 Score=91.93 Aligned_cols=72 Identities=21% Similarity=0.314 Sum_probs=61.2
Q ss_pred CCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCC
Q psy9257 357 SGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 357 ~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~ 429 (530)
.++|||++... ..|++|..|.++|+|+++||+.||+|++|||+.+.++++.++..+++.. +..+.|+|.|++
T Consensus 10 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 84 (85)
T 1rgw_A 10 PGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSA-SYNLSLTLQKSK 84 (85)
T ss_dssp SSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTC-SSCEEEEEESCC
T ss_pred CCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 35699999753 3589999999999999999999999999999999999887788777554 567999998864
No 151
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.10 E-value=5.4e-10 Score=98.72 Aligned_cols=84 Identities=21% Similarity=0.214 Sum_probs=71.5
Q ss_pred ccceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEEEE
Q psy9257 346 GIRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIRVV 424 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~VtLt 424 (530)
..++|.+.|+.. +|||++.....|.+|..|.+ +++.+||+.||+|++|||+.|.+++++++..+++..+ +..|.|+
T Consensus 12 ~~~~V~L~Kg~~-G~GFsI~~~~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~ 88 (113)
T 3soe_A 12 LLVTIPLIKGPK-GFGFAIADSPTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLL 88 (113)
T ss_dssp EEEEEEEECBTT-BSSEEEEEETTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEEEEEECCC-cccEEEeCCCCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEE
Confidence 345788888755 59999987778889999987 5888999999999999999999999999999999764 7899999
Q ss_pred EecCCcee
Q psy9257 425 IRDRPLER 432 (530)
Q Consensus 425 VrR~~~e~ 432 (530)
|.|++...
T Consensus 89 V~R~g~~~ 96 (113)
T 3soe_A 89 ILRGGPPS 96 (113)
T ss_dssp EEESSCC-
T ss_pred EEECCccC
Confidence 99976543
No 152
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=2.1e-10 Score=96.64 Aligned_cols=82 Identities=29% Similarity=0.406 Sum_probs=64.9
Q ss_pred cceEEEec-cCCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEE
Q psy9257 347 IRELVLCK-DASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIR 422 (530)
Q Consensus 347 Vr~V~L~K-~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~Vt 422 (530)
.+.+.+.+ ....+|||.+... ..|++|..|.++++|+++||+.||+|++|||+.+.++.+..+..++ ..+..|.
T Consensus 9 ~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~--~~~~~v~ 86 (101)
T 1uez_A 9 VRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKAL--KGSKKLV 86 (101)
T ss_dssp CEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHS--SSSSSCC
T ss_pred cEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhh--cCCCeEE
Confidence 34555554 3466799999875 3689999999999999999999999999999999999885444444 3356788
Q ss_pred EEEecCCc
Q psy9257 423 VVIRDRPL 430 (530)
Q Consensus 423 LtVrR~~~ 430 (530)
|+|.|+++
T Consensus 87 l~v~R~g~ 94 (101)
T 1uez_A 87 LSVYSAGR 94 (101)
T ss_dssp EEECCCCC
T ss_pred EEEEECCc
Confidence 99888653
No 153
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=2.6e-10 Score=97.59 Aligned_cols=82 Identities=21% Similarity=0.319 Sum_probs=67.8
Q ss_pred cceEEEeccCCCeeEEEEEecCC----cEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC----C
Q psy9257 347 IRELVLCKDASGLIGLRVCAINE----GVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA----P 417 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~----GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a----~ 417 (530)
.+.|.+.+. ..+|||++.+... +++|..|.++++|+++| |+.||+|++|||+.+.+++++++..+++.. .
T Consensus 7 ~~~v~l~k~-~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 85 (103)
T 1ufx_A 7 GTLVRVKKS-AATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKD 85 (103)
T ss_dssp SEEEEEECC-SSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSS
T ss_pred eEEEEEEcC-CCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCC
Confidence 345666554 4569999987542 25999999999999999 999999999999999999998899999875 5
Q ss_pred CCeEEEEEecCC
Q psy9257 418 VNNIRVVIRDRP 429 (530)
Q Consensus 418 G~~VtLtVrR~~ 429 (530)
++.+.|+|.|..
T Consensus 86 ~~~i~l~v~r~~ 97 (103)
T 1ufx_A 86 RDYIDFLVTEFN 97 (103)
T ss_dssp CSEEEEEECCCC
T ss_pred CCeEEEEEEEcc
Confidence 678888888753
No 154
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=2.4e-10 Score=95.26 Aligned_cols=72 Identities=24% Similarity=0.314 Sum_probs=62.5
Q ss_pred CeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCc
Q psy9257 358 GLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPL 430 (530)
Q Consensus 358 G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~ 430 (530)
.+|||++..+ ..+++|..|.++++|+++||+.||+|++|||+.+.++++.++..+++. .++.+.|+|.|+++
T Consensus 18 ~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 18 SPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECCSS
T ss_pred CccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 5699999863 367999999999999999999999999999999999987777777766 57789999988654
No 155
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.09 E-value=2.9e-10 Score=96.44 Aligned_cols=78 Identities=23% Similarity=0.448 Sum_probs=66.4
Q ss_pred cceEEEeccCCCeeEEEEEec----------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 347 IRELVLCKDASGLIGLRVCAI----------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~----------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
.+.+.+.+...+.|||.+... ..+++|..|.++++|+++||+.||+|++|||+.+.+++.+++.++++..
T Consensus 16 ~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 95 (104)
T 2z17_A 16 RKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSS 95 (104)
T ss_dssp CCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHT
T ss_pred ceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC
Confidence 456667777677899999962 3589999999999999999999999999999999988888899999887
Q ss_pred CCCeEEEEE
Q psy9257 417 PVNNIRVVI 425 (530)
Q Consensus 417 ~G~~VtLtV 425 (530)
. ..|.|+|
T Consensus 96 ~-~~v~l~v 103 (104)
T 2z17_A 96 G-NLLTIET 103 (104)
T ss_dssp T-TEEEEEC
T ss_pred C-CcEEEEE
Confidence 4 4777765
No 156
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.09 E-value=5.1e-10 Score=95.25 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=69.5
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
..++++|.+...+.|||.+.+| .|..|.++|+|+++ ||+.||+|++|||+++.+++.+++..++++.++.++
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~ 88 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 88 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEE
T ss_pred CcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 3456677777777799999754 38999999999995 999999999999999999999999999999889999
Q ss_pred EEEEeCcchhhh
Q psy9257 502 LTLIPTSMYQHM 513 (530)
Q Consensus 502 LtVip~~~~e~m 513 (530)
|+|.+....+++
T Consensus 89 l~v~~~~~~~~~ 100 (103)
T 2dc2_A 89 FEVVYVALEHHH 100 (103)
T ss_dssp EEEEECC-----
T ss_pred EEEEecCCcchh
Confidence 999998766654
No 157
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=5.3e-10 Score=98.35 Aligned_cols=88 Identities=24% Similarity=0.357 Sum_probs=70.6
Q ss_pred EEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 350 LVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
+.+.......|||.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++.+.++...++. +..+.|+|.
T Consensus 24 v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~v~l~v~ 101 (128)
T 1uf1_A 24 VNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS--SRHLILTVK 101 (128)
T ss_dssp EEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSEEEEEEE
T ss_pred EEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCeEEEEEE
Confidence 444434446799999863 258999999999999999999999999999999999988667776654 468999999
Q ss_pred cCCceeeEEeccC
Q psy9257 427 DRPLERTVTLHRD 439 (530)
Q Consensus 427 R~~~e~tVtL~kd 439 (530)
|+++..++++...
T Consensus 102 R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 102 DVGRLPHARTTVD 114 (128)
T ss_dssp CCSCCSSCSCCCC
T ss_pred ECCcccccccccc
Confidence 9887776665543
No 158
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.08 E-value=5e-10 Score=93.17 Aligned_cols=76 Identities=28% Similarity=0.400 Sum_probs=63.1
Q ss_pred EEEeccCCCeeEEEEEec-----------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC
Q psy9257 350 LVLCKDASGLIGLRVCAI-----------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPV 418 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~-----------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G 418 (530)
|.+.++ .+|||.+.+. ..|++|..|.++|+|++ ||+.||+|++|||+.+.++++.++..+++. .+
T Consensus 7 v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~ 82 (95)
T 1mfg_A 7 VRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQ 82 (95)
T ss_dssp EEEECS--SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH-CC
T ss_pred EEECCC--CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc-CC
Confidence 444443 3699999863 35899999999999999 999999999999999999888778888765 47
Q ss_pred CeEEEEEecCC
Q psy9257 419 NNIRVVIRDRP 429 (530)
Q Consensus 419 ~~VtLtVrR~~ 429 (530)
..+.|+|.|+.
T Consensus 83 ~~v~l~v~R~~ 93 (95)
T 1mfg_A 83 NTVELIIVREV 93 (95)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 88999998753
No 159
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=8.9e-11 Score=100.33 Aligned_cols=86 Identities=33% Similarity=0.526 Sum_probs=72.3
Q ss_pred cccccceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 343 VTNGIRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 343 ~~~~Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
.....+.|.+.+.. .+|||.+.... .|++|..|.++++|+++| |+.||+|++|||+.+.++.+.++..+++. .+.
T Consensus 12 ~~~~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~-~~~ 89 (113)
T 1um7_A 12 DAREPRKIILHKGS-TGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR-AGQ 89 (113)
T ss_dssp CCCSEEEEEEECCS-SCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS-CCS
T ss_pred CCCceEEEEEEECC-CcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCC
Confidence 34566778887765 55999998654 789999999999999999 99999999999999999987777877765 578
Q ss_pred eEEEEEecCCc
Q psy9257 420 NIRVVIRDRPL 430 (530)
Q Consensus 420 ~VtLtVrR~~~ 430 (530)
.+.|+|.|++.
T Consensus 90 ~v~l~v~r~~~ 100 (113)
T 1um7_A 90 SVTIVAQYRPE 100 (113)
T ss_dssp EEEEEEECCHH
T ss_pred cEEEEEEECcc
Confidence 89999988654
No 160
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.08 E-value=7.9e-10 Score=91.10 Aligned_cols=78 Identities=27% Similarity=0.449 Sum_probs=68.8
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
+.++++|.+.....|||.+.++ .|..|.++|+|+++ ||+.||+|++|||+++.+++..++...+++.++.++
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~ 83 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 83 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 5677888887777899999754 28899999999999 899999999999999999999999999998899999
Q ss_pred EEEEeC
Q psy9257 502 LTLIPT 507 (530)
Q Consensus 502 LtVip~ 507 (530)
|+|.+.
T Consensus 84 l~v~r~ 89 (90)
T 1qav_A 84 LEVKYM 89 (90)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 998763
No 161
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.08 E-value=6.6e-10 Score=91.58 Aligned_cols=79 Identities=32% Similarity=0.505 Sum_probs=68.3
Q ss_pred CceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
.+.++|+|.++.. .|||.+.. |. |..|.++++|+++||+.||+|++|||+++.+++++++..+++..++.+.|
T Consensus 3 ~~~r~v~l~k~~~-g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 81 (90)
T 2he4_A 3 LRPRLCHLRKGPQ-GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARL 81 (90)
T ss_dssp TCCEEEEEECBTT-BCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEE
T ss_pred CCcEEEEEEECCC-CccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEE
Confidence 3556777877765 49999863 33 88999999999999999999999999999999988999999988999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.|..
T Consensus 82 ~v~r~~ 87 (90)
T 2he4_A 82 LVVGPS 87 (90)
T ss_dssp EEECCC
T ss_pred EEEccC
Confidence 998865
No 162
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.07 E-value=7.6e-10 Score=90.48 Aligned_cols=77 Identities=26% Similarity=0.382 Sum_probs=67.4
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHH-cCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAAR-NGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAar-AGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
+.++++|.++....|||.+.+| .|..|.++|+|++ +||+.||+|++|||+++.+++.+++..++++.++.++
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4567788887777899999754 3889999999999 6999999999999999999999999999999899999
Q ss_pred EEEEe
Q psy9257 502 LTLIP 506 (530)
Q Consensus 502 LtVip 506 (530)
|+|..
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88853
No 163
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.07 E-value=3e-10 Score=93.99 Aligned_cols=82 Identities=26% Similarity=0.399 Sum_probs=65.7
Q ss_pred ceeeEEeccCCCCccceeecc-----C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+.++|+|.++.. .|||.+.. | .|..|.++|+|+++||+.||+|++|||+++.+++.+++..+++..++.++|+
T Consensus 3 ~pr~v~l~k~~~-~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2vsp_A 3 KPKLCRLAKGEN-GYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLL 81 (91)
T ss_dssp CEEEEEEECBTT-BTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEE
T ss_pred CcEEEEEEeCCC-cccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 457788888766 48999853 2 2889999999999999999999999999999888899999998779999999
Q ss_pred EEeCcchhh
Q psy9257 504 LIPTSMYQH 512 (530)
Q Consensus 504 Vip~~~~e~ 512 (530)
|.+....++
T Consensus 82 v~r~~~~~~ 90 (91)
T 2vsp_A 82 VCGKKAQDT 90 (91)
T ss_dssp EEC------
T ss_pred EEeCCcccc
Confidence 998765543
No 164
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.07 E-value=5.6e-10 Score=93.05 Aligned_cols=82 Identities=23% Similarity=0.434 Sum_probs=69.7
Q ss_pred ceeeEEeccCCCCccceeecc--------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK--------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~--------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
+.++|+|.++.. .|||.+.. |. |..|.++++|+++||+.||+|++|||+++.+++.+++..+++..++.+
T Consensus 3 ~~r~v~l~k~~~-~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (96)
T 2v90_A 3 KPRCLHLEKGPQ-GFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV 81 (96)
T ss_dssp CCEEEEEECBTT-BSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCEEEEEEeCCC-cccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 346777777765 59999864 23 889999999999999999999999999999988899999998889999
Q ss_pred EEEEEeCcchhh
Q psy9257 501 TLTLIPTSMYQH 512 (530)
Q Consensus 501 tLtVip~~~~e~ 512 (530)
.|+|.|......
T Consensus 82 ~l~v~r~~~~~~ 93 (96)
T 2v90_A 82 SLTVVDPEADRE 93 (96)
T ss_dssp EEEEECCCTTSC
T ss_pred EEEEECCCCccc
Confidence 999998765443
No 165
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=4.6e-11 Score=101.39 Aligned_cols=78 Identities=21% Similarity=0.214 Sum_probs=66.9
Q ss_pred CCCeeEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCcee
Q psy9257 356 ASGLIGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLER 432 (530)
Q Consensus 356 s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~ 432 (530)
...+|||++.... .+++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..+++.. ++.+.|+|.|+++.+
T Consensus 13 ~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~~~ 91 (103)
T 1v5l_A 13 GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAETRL 91 (103)
T ss_dssp SSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTTTT
T ss_pred CCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCeEc
Confidence 3567999988653 479999999999999999999999999999999998777888888776 889999999977654
Q ss_pred eE
Q psy9257 433 TV 434 (530)
Q Consensus 433 tV 434 (530)
.+
T Consensus 92 ~~ 93 (103)
T 1v5l_A 92 WS 93 (103)
T ss_dssp SC
T ss_pred cC
Confidence 43
No 166
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1.1e-10 Score=98.21 Aligned_cols=80 Identities=23% Similarity=0.365 Sum_probs=65.7
Q ss_pred EEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEE
Q psy9257 350 LVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVI 425 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtV 425 (530)
+.+.+.. .+|||++.... .|++|..|.++++|+++| |+.||+|++|||+.+.++++.++..+++. .+..|.|+|
T Consensus 15 v~l~~~~-~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v 92 (103)
T 1wfv_A 15 VDMEKGA-KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKS-GGRRVRLLL 92 (103)
T ss_dssp CCEECCT-TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHH-HCSEECEEE
T ss_pred EEEecCC-CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEE
Confidence 3444443 44999998654 389999999999999999 99999999999999999988778888873 468899999
Q ss_pred ecCCce
Q psy9257 426 RDRPLE 431 (530)
Q Consensus 426 rR~~~e 431 (530)
.|++..
T Consensus 93 ~R~~~~ 98 (103)
T 1wfv_A 93 KRGTGS 98 (103)
T ss_dssp ECTTCS
T ss_pred EECCCC
Confidence 887543
No 167
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.06 E-value=1e-09 Score=90.39 Aligned_cols=80 Identities=26% Similarity=0.451 Sum_probs=66.9
Q ss_pred ceeeEEeccCCCCccceeeccC-----c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-----Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-----v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+.++|+|.+...+ |||.+..+ . |..|.++|+|+++||+.||+|++|||+++.+++..++..+++..++.+.+.
T Consensus 3 ~~r~v~l~r~~~g-~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~ 81 (91)
T 1g9o_A 3 LPRLCCLEKGPNG-YGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL 81 (91)
T ss_dssp CCEEEEEECBTTB-CCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred ccEEEEEEeCCCc-ccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 4567778777654 99998643 2 899999999999999999999999999999999899999999877777777
Q ss_pred EEeCcch
Q psy9257 504 LIPTSMY 510 (530)
Q Consensus 504 Vip~~~~ 510 (530)
+.+....
T Consensus 82 ~~~r~~~ 88 (91)
T 1g9o_A 82 VVDPETD 88 (91)
T ss_dssp EECCCCS
T ss_pred EEcCCcc
Confidence 7665433
No 168
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=1.1e-09 Score=90.66 Aligned_cols=77 Identities=25% Similarity=0.318 Sum_probs=66.0
Q ss_pred eeeEEeccCCCCccceeeccC---cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG---QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPT 507 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G---vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~ 507 (530)
.++|+|.++..+ |||.+... .|..|.++++|+++||+.||+|++|||+++.+++..++..+++..++.+.|+|.|.
T Consensus 4 ~r~v~l~~~~~g-~G~~l~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 82 (91)
T 2f5y_A 4 YRQITIPRGKDG-FGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRM 82 (91)
T ss_dssp EEEEEEECBTTB-TSEEEECSSSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEC
T ss_pred eEEEEEEeCCCC-ccEEEecCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 456777776544 89988643 38899999999999999999999999999999988899999988888999999886
Q ss_pred c
Q psy9257 508 S 508 (530)
Q Consensus 508 ~ 508 (530)
.
T Consensus 83 ~ 83 (91)
T 2f5y_A 83 V 83 (91)
T ss_dssp C
T ss_pred C
Confidence 4
No 169
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.06 E-value=1.2e-09 Score=87.35 Aligned_cols=72 Identities=21% Similarity=0.404 Sum_probs=60.3
Q ss_pred eccCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecC
Q psy9257 353 CKDASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDR 428 (530)
Q Consensus 353 ~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~ 428 (530)
.......|||.+. .|++|..|.++|+|+++| |+.||+|++|||+.+.+++..++..+++... ..+.|+|.|+
T Consensus 8 ~~~~~~~~g~~~~---~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 80 (81)
T 2rcz_A 8 KSRKNEEYGLRLA---SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRD 80 (81)
T ss_dssp CCSTTCCCCEEEE---EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC-
T ss_pred ECCCCCCCCEEEe---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEeC
Confidence 3344556888876 689999999999999999 9999999999999999777777888887654 5888988775
No 170
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.05 E-value=1.1e-09 Score=93.54 Aligned_cols=79 Identities=29% Similarity=0.484 Sum_probs=67.7
Q ss_pred ceeeEEeccCCCCccceeecc------------------C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHH
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK------------------G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELL 490 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~------------------G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv 490 (530)
+.++++|.++..+.|||.+.. | .|..|.++++|+++||+.||+|++|||+.|.+++++++.
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345677776666779999863 2 388999999999999999999999999999999989999
Q ss_pred HHHHhCCCEEEEEEEeCc
Q psy9257 491 EAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 491 ~iLkrsG~tVtLtVip~~ 508 (530)
.++++.++.+.|+|.+..
T Consensus 87 ~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHTTTEEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEECC
Confidence 999988999999998753
No 171
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.05 E-value=3e-10 Score=99.96 Aligned_cols=81 Identities=25% Similarity=0.353 Sum_probs=65.8
Q ss_pred cCCCeeEEEEEec------CCcEEEEEecc--CCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 355 DASGLIGLRVCAI------NEGVFVCLVER--GSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 355 ~s~G~LG~~V~~~------~~GV~Vs~V~p--GSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
...+.+||.+... ..|++|..|.+ +++|+++||+.||+|++|||+.+.++..+++..+++.. +..+.|+|+
T Consensus 24 ~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~ 102 (118)
T 2yub_A 24 TTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIE 102 (118)
T ss_dssp CSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEE
T ss_pred ccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEE
Confidence 3344455555432 36899999999 99999999999999999999999999767788888877 889999999
Q ss_pred cCCceeeEEe
Q psy9257 427 DRPLERTVTL 436 (530)
Q Consensus 427 R~~~e~tVtL 436 (530)
|+++..++++
T Consensus 103 R~g~~~~~~~ 112 (118)
T 2yub_A 103 HDPVPQRLDQ 112 (118)
T ss_dssp ECSSCCCCCS
T ss_pred ECCEEEeeec
Confidence 9887666543
No 172
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.05 E-value=2.4e-10 Score=114.12 Aligned_cols=86 Identities=20% Similarity=0.264 Sum_probs=75.0
Q ss_pred ccccceEEEeccCCCeeEEEEEecC---CcEEEEEeccCCHhhh-cCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 344 TNGIRELVLCKDASGLIGLRVCAIN---EGVFVCLVERGSPASL-VGLRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 344 ~~~Vr~V~L~K~s~G~LG~~V~~~~---~GV~Vs~V~pGSPAak-AGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
....+.|.+.|...++|||.+.++. .|++|..|.+||+|++ +||+.||+|++|||+.|.++++.++..+++.. ++
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~-g~ 153 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GK 153 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC-CS
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC-CC
Confidence 3356788888877788999998753 6899999999999999 79999999999999999999999999999886 67
Q ss_pred eEEEEEecCCc
Q psy9257 420 NIRVVIRDRPL 430 (530)
Q Consensus 420 ~VtLtVrR~~~ 430 (530)
.|.|+|+|..+
T Consensus 154 ~V~L~V~R~~~ 164 (263)
T 1z87_A 154 EVVLEVKYMKE 164 (263)
T ss_dssp CCCEEEECCSS
T ss_pred eEEEEEEeCcc
Confidence 89999998654
No 173
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.05 E-value=1.5e-09 Score=89.51 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=65.5
Q ss_pred ceeeEEeccCCC-CccceeeccC-----c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSS-GHFGFHFNKG-----Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~-g~LGfs~~~G-----v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
+.++++|.++.. ..|||.+..+ . |..|.++++|+++||+.||+|++|||+.+.++.+.++...+++.++.+.|
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 85 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDL 85 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEE
T ss_pred ceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 445667766544 4689998643 3 88999999999999999999999999999999888888888888999999
Q ss_pred EEEeC
Q psy9257 503 TLIPT 507 (530)
Q Consensus 503 tVip~ 507 (530)
+|.|.
T Consensus 86 ~v~R~ 90 (91)
T 1m5z_A 86 VISRN 90 (91)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99764
No 174
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.05 E-value=6.9e-10 Score=97.43 Aligned_cols=81 Identities=16% Similarity=0.307 Sum_probs=67.3
Q ss_pred CceeeEEeccCCCCccceeeccC---------c-EEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNKG---------Q-IVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~G---------v-V~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
...++|+|.+...+.|||.+.+| . |..|.++++|+++ ||+.||+|++|||+++.+++..++..+++..+
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45677888887776799999753 2 8899999999999 89999999999999999999999999999999
Q ss_pred CEEEEEEEeCcc
Q psy9257 498 SVLTLTLIPTSM 509 (530)
Q Consensus 498 ~tVtLtVip~~~ 509 (530)
+.++|+|.|...
T Consensus 103 ~~v~l~v~r~g~ 114 (120)
T 2iwo_A 103 GSIEMQVVAGGD 114 (120)
T ss_dssp SEEEEEEECCTT
T ss_pred CeEEEEEEECCc
Confidence 999999998753
No 175
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.04 E-value=1e-09 Score=93.91 Aligned_cols=79 Identities=22% Similarity=0.380 Sum_probs=63.6
Q ss_pred cceEEEeccC--CCeeEEEEEecC----CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 347 IRELVLCKDA--SGLIGLRVCAIN----EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 347 Vr~V~L~K~s--~G~LG~~V~~~~----~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
.+.+++.|.. ..+|||++.... .|++|..|.++|+|+++||+.||+|++|||+.+.+++.+++..++++ ..
T Consensus 7 ~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~---~~ 83 (94)
T 3kzd_A 7 THSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PS 83 (94)
T ss_dssp EEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---SE
T ss_pred eeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---Ce
Confidence 4566676654 346999998732 58999999999999999999999999999999999988888888864 56
Q ss_pred EEEEEecC
Q psy9257 421 IRVVIRDR 428 (530)
Q Consensus 421 VtLtVrR~ 428 (530)
++|+|+.-
T Consensus 84 l~ltV~~~ 91 (94)
T 3kzd_A 84 LGLLVRTY 91 (94)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 88887753
No 176
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.04 E-value=1.1e-09 Score=92.92 Aligned_cols=79 Identities=28% Similarity=0.492 Sum_probs=68.2
Q ss_pred ceeeEEeccCCCCccceeeccC-------------------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHH
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------------------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELL 490 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------------------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv 490 (530)
..+.+.|.+... .|||.+.++ .|..|.++++|+++||+.||+|++|||+++.+++.+++.
T Consensus 6 ~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~ 84 (107)
T 3qe1_A 6 SPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV 84 (107)
T ss_dssp CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 456677777655 489998655 289999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEEEeCcc
Q psy9257 491 EAMEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 491 ~iLkrsG~tVtLtVip~~~ 509 (530)
.++++.++.+.|+|.|...
T Consensus 85 ~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 85 DLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHCSSEEEEEEECSSC
T ss_pred HHHHcCCCEEEEEEEcCCC
Confidence 9999989999999988653
No 177
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.5e-09 Score=91.05 Aligned_cols=70 Identities=27% Similarity=0.518 Sum_probs=62.9
Q ss_pred cCCCCccceeeccCcEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeC
Q psy9257 438 RDSSGHFGFHFNKGQIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPT 507 (530)
Q Consensus 438 kd~~g~LGfs~~~GvV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~ 507 (530)
.+....|||.+.+|.|..|.++|+|+++||+.||+|++|||+++.+++.+++..++++.++.+.|+|.+.
T Consensus 20 ~~~~~~lG~~~~~G~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 20 PDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 89 (90)
T ss_dssp SSTTSCCCEEEETTEEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred CCCccccCeEecCCEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 3445568998888889999999999999999999999999999998888999999998899999999875
No 178
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=9.8e-11 Score=103.11 Aligned_cols=61 Identities=30% Similarity=0.511 Sum_probs=55.4
Q ss_pred CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCc
Q psy9257 369 EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPL 430 (530)
Q Consensus 369 ~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~ 430 (530)
.|++|..|.++++|+++||+.||+|++|||+.|.+++.+++..+++.. +..|.|+|.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECCC
Confidence 569999999999999999999999999999999988888899999875 7899999988654
No 179
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.04 E-value=3.9e-10 Score=95.30 Aligned_cols=76 Identities=28% Similarity=0.413 Sum_probs=64.2
Q ss_pred eEEEeccCCCeeEEEEEe-----------cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC
Q psy9257 349 ELVLCKDASGLIGLRVCA-----------INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAP 417 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~-----------~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~ 417 (530)
.|.+.++ ++|||++.+ ...|++|..|.++|+|++ ||+.||+|++|||+.+.++++.++..+++. .
T Consensus 14 ~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~ 89 (103)
T 1n7t_A 14 RVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-F 89 (103)
T ss_dssp EEEEECS--SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHH-C
T ss_pred EEEEccC--CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhc-C
Confidence 3445554 479999987 346899999999999999 999999999999999999988888888875 4
Q ss_pred CCeEEEEEecC
Q psy9257 418 VNNIRVVIRDR 428 (530)
Q Consensus 418 G~~VtLtVrR~ 428 (530)
+..+.|+|.|+
T Consensus 90 g~~v~l~v~R~ 100 (103)
T 1n7t_A 90 QNTVELIIVRE 100 (103)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEec
Confidence 68899999885
No 180
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.04 E-value=1.5e-09 Score=89.96 Aligned_cols=71 Identities=27% Similarity=0.410 Sum_probs=61.3
Q ss_pred cCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCC
Q psy9257 355 DASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 355 ~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~ 429 (530)
.....+||.+.. |++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++... ..|.|++.+..
T Consensus 10 ~~~~~~G~~~~~---gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~v~L~v~~~~ 81 (88)
T 3e17_A 10 RANEEYGLRLGS---QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GKLQLVVLRDL 81 (88)
T ss_dssp TTBCCCCEEEEE---EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEECCC-
T ss_pred CCCCCCCEEEeC---CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEeCCC
Confidence 334568998863 89999999999999999 9999999999999999999989999998764 58899887753
No 181
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.03 E-value=8.6e-10 Score=93.49 Aligned_cols=83 Identities=25% Similarity=0.472 Sum_probs=70.3
Q ss_pred eeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLI 505 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVi 505 (530)
+.++|.+.....+||.+.. |. |..|.++|+|+++||+.||+|++|||+++.++.+.++...+++.++.++|+|.
T Consensus 3 r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~ 82 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVL 82 (106)
T ss_dssp EEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEE
T ss_pred EEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEE
Confidence 4667777776778888763 33 88999999999999999999999999999999988999999988999999999
Q ss_pred eCcchhhhh
Q psy9257 506 PTSMYQHMM 514 (530)
Q Consensus 506 p~~~~e~m~ 514 (530)
|....+.+.
T Consensus 83 r~~~~~~~~ 91 (106)
T 3ngh_A 83 DGDSYEKAV 91 (106)
T ss_dssp CHHHHHHHH
T ss_pred ECCeeeeee
Confidence 876554443
No 182
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.03 E-value=1.8e-09 Score=92.94 Aligned_cols=81 Identities=25% Similarity=0.346 Sum_probs=69.3
Q ss_pred cceEEEeccCCCeeEEEEEecC-CcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCC-CeEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN-EGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPV-NNIRV 423 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~-~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G-~~VtL 423 (530)
.++|.+.|.. ..|||++.... ..+||++|.+|++|++.| |+.||.|++|||+.+.++++.++.++|++.+. ..++|
T Consensus 6 ~k~V~l~K~~-~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L 84 (95)
T 3gge_A 6 EKEVNVYKSE-DSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTM 84 (95)
T ss_dssp EEEEEEECCS-SCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEEEEECC-CCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEE
Confidence 4578888865 56999998643 458999999999999999 99999999999999999999999999998754 66777
Q ss_pred EEecC
Q psy9257 424 VIRDR 428 (530)
Q Consensus 424 tVrR~ 428 (530)
.+.+.
T Consensus 85 ~lv~p 89 (95)
T 3gge_A 85 KLIEP 89 (95)
T ss_dssp EEEEE
T ss_pred EEECc
Confidence 77653
No 183
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.03 E-value=9.1e-10 Score=98.29 Aligned_cols=80 Identities=29% Similarity=0.467 Sum_probs=70.1
Q ss_pred CceeeEEeccCCCCccceeecc------------------C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHH
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK------------------G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKEL 489 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~------------------G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeV 489 (530)
.+.++++|.+...+.|||.+.+ | .|..|.++++|+++||+.||+|++|||++|.+++.+++
T Consensus 26 ~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 26 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 3567888888777779999863 2 38899999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEEEeCc
Q psy9257 490 LEAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 490 v~iLkrsG~tVtLtVip~~ 508 (530)
..++++.++.+.|+|.+..
T Consensus 106 ~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 106 VNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHTTTEEEEEEECCC
T ss_pred HHHHHcCCCEEEEEEEECC
Confidence 9999999999999998765
No 184
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.03 E-value=2.2e-09 Score=89.24 Aligned_cols=79 Identities=22% Similarity=0.377 Sum_probs=66.8
Q ss_pred CceeeEEeccCCCCccceeecc---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
++.+++.|.++. ..|||.+.+ |. |..|.++++|+++| |+.||+|++|||+.+.+++.+++..+++..+
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 445666666654 458998874 33 88999999999999 9999999999999999999899999999889
Q ss_pred CEEEEEEEeCc
Q psy9257 498 SVLTLTLIPTS 508 (530)
Q Consensus 498 ~tVtLtVip~~ 508 (530)
+.+.|+|.|..
T Consensus 83 ~~v~l~v~R~~ 93 (96)
T 1d5g_A 83 QVVHLLLEKGQ 93 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEcCC
Confidence 99999998754
No 185
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1.5e-09 Score=89.90 Aligned_cols=77 Identities=18% Similarity=0.368 Sum_probs=67.2
Q ss_pred eeEEeccCCCCccceeeccC-----cEEEEccCCHHHH-cCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-----QIVSLVKDSSAAR-NGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLI 505 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-----vV~sVv~gSpAar-AGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVi 505 (530)
+.|.|.|+....|||.+..+ .|..|.++++|++ +||+.||+|++|||+++.+++.+++..+|+...+.++|+|.
T Consensus 3 r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 82 (88)
T 1kwa_A 3 RLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIV 82 (88)
T ss_dssp EEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEE
T ss_pred EEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEE
Confidence 56788888777799999752 2899999999999 78999999999999999999999999999977669999998
Q ss_pred eCc
Q psy9257 506 PTS 508 (530)
Q Consensus 506 p~~ 508 (530)
|..
T Consensus 83 r~~ 85 (88)
T 1kwa_A 83 PSY 85 (88)
T ss_dssp CCC
T ss_pred CCc
Confidence 764
No 186
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.02 E-value=1.5e-09 Score=88.85 Aligned_cols=75 Identities=20% Similarity=0.322 Sum_probs=63.3
Q ss_pred EEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEe
Q psy9257 434 VTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIP 506 (530)
Q Consensus 434 VtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip 506 (530)
+++.......|||.+.+| .|..|.++++|+++||+.||+|++|||+++.+++.+++..+++..++.+.|+|.|
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 83 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDR 83 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEE
T ss_pred EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEe
Confidence 344444456799998643 2889999999999999999999999999999988899999999877899999988
Q ss_pred Cc
Q psy9257 507 TS 508 (530)
Q Consensus 507 ~~ 508 (530)
..
T Consensus 84 ~~ 85 (87)
T 2pa1_A 84 IT 85 (87)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 187
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.02 E-value=1.6e-09 Score=91.95 Aligned_cols=80 Identities=15% Similarity=0.328 Sum_probs=67.7
Q ss_pred ceeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
+.++|+|.++. ..|||.+.+ |. |..|.++|+|+++| |+.||+|++|||+.+.+++..++...+++.
T Consensus 3 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 3 KIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred eEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34566777766 459999973 33 88999999999999 999999999999999999989999999988
Q ss_pred CCEEEEEEEeCcch
Q psy9257 497 GSVLTLTLIPTSMY 510 (530)
Q Consensus 497 G~tVtLtVip~~~~ 510 (530)
++.+.|+|.|....
T Consensus 82 ~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 82 SDFVYLKVAKPTSM 95 (105)
T ss_dssp CSEEEEEEECCCC-
T ss_pred CCeEEEEEEcCCCC
Confidence 99999999987644
No 188
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.02 E-value=9.6e-10 Score=91.11 Aligned_cols=82 Identities=29% Similarity=0.471 Sum_probs=66.2
Q ss_pred ceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+.+.++|.++.. .|||.+.. |. |..|.++++|+++||+.||+|++|||+++.+++++++..+|+..++.+.++
T Consensus 5 ~~r~v~l~~~~~-~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~ 83 (95)
T 3r68_A 5 QPRVVVIKKGSN-GYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL 83 (95)
T ss_dssp CCEEEEEECBTT-BCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred CcEEEEEecCCC-cccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 345666766543 48999863 22 888999999999999999999999999999999899999999988999998
Q ss_pred EEeCcchhh
Q psy9257 504 LIPTSMYQH 512 (530)
Q Consensus 504 Vip~~~~e~ 512 (530)
+.+....+.
T Consensus 84 ~~r~~~~~~ 92 (95)
T 3r68_A 84 VLDKELERP 92 (95)
T ss_dssp EEECC----
T ss_pred EECCccccc
Confidence 887765443
No 189
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.02 E-value=1.5e-09 Score=91.30 Aligned_cols=78 Identities=24% Similarity=0.388 Sum_probs=67.4
Q ss_pred ceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
..++++|.++.. .|||.+.. |. |..|.++|+|+++| |+.||+|++|||+++.+++..++...+++.++.++|
T Consensus 11 ~~~~v~l~k~~~-glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 89 (104)
T 3i4w_A 11 EPRRIVIHRGST-GLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI 89 (104)
T ss_dssp SCEEEEEECBTT-BTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEE
T ss_pred ccEEEEEEeCCC-ccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 456677777654 49999874 33 88999999999999 999999999999999999998999999989999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.+..
T Consensus 90 ~v~r~~ 95 (104)
T 3i4w_A 90 IAQYKP 95 (104)
T ss_dssp EEEECH
T ss_pred EEEECc
Confidence 998873
No 190
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.02 E-value=1.7e-09 Score=90.94 Aligned_cols=78 Identities=23% Similarity=0.426 Sum_probs=67.4
Q ss_pred ceeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
..++|+|.++. ..|||.+.+ |. |..|.++++|+++| |+.||+|++|||+.+.+++..++..++++.
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45677787776 569999875 22 88999999999999 999999999999999999888999999888
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.+.|+|.|..
T Consensus 86 g~~v~l~v~R~~ 97 (101)
T 2jik_A 86 GYAVSLRVQHRL 97 (101)
T ss_dssp CSEEEEEEEEES
T ss_pred CCeEEEEEEeCC
Confidence 899999997754
No 191
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=8.1e-10 Score=96.45 Aligned_cols=81 Identities=28% Similarity=0.369 Sum_probs=65.9
Q ss_pred ccceEEEeccCCCeeEEEEEecC----CcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhC---C
Q psy9257 346 GIRELVLCKDASGLIGLRVCAIN----EGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAA---P 417 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~~~----~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a---~ 417 (530)
.++.+.+.+. ++|||.+.+.. ..++|..|.++|+|+++ ||+.||+|++|||+.+.+++++++..+++.. .
T Consensus 18 ~~~~~~~~~~--~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~ 95 (118)
T 1v6b_A 18 DVRLLRIKKE--GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQG 95 (118)
T ss_dssp CEEEEEEESC--SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHT
T ss_pred eEEEEEECCC--CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcC
Confidence 3445555444 46999998642 34999999999999999 8999999999999999999988888888754 3
Q ss_pred CCeEEEEEecC
Q psy9257 418 VNNIRVVIRDR 428 (530)
Q Consensus 418 G~~VtLtVrR~ 428 (530)
+..|+|+|.|.
T Consensus 96 g~~v~l~v~r~ 106 (118)
T 1v6b_A 96 GDWIDLVVAVC 106 (118)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 78899999883
No 192
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.01 E-value=2.1e-09 Score=89.68 Aligned_cols=78 Identities=26% Similarity=0.405 Sum_probs=67.3
Q ss_pred eeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
.++++|.+.....|||.+.+ |. |..|.++++|+++| |+.||+|++|||+++.++++.++..++++.
T Consensus 6 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (98)
T 1ihj_A 6 IHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA 85 (98)
T ss_dssp EEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred EEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 35677777666679999863 33 88999999999999 999999999999999999888999999889
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.++|+|.|..
T Consensus 86 g~~v~l~v~R~g 97 (98)
T 1ihj_A 86 DFKIELEIQTFD 97 (98)
T ss_dssp CSEEEEEEEEC-
T ss_pred CCeEEEEEEeCC
Confidence 999999998863
No 193
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=5.3e-10 Score=94.48 Aligned_cols=80 Identities=21% Similarity=0.348 Sum_probs=63.9
Q ss_pred eEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhhc-CCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEE
Q psy9257 349 ELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASLV-GLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVV 424 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakA-GLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLt 424 (530)
.+.+......+|||++... ..+++|..|.++|+|+++ ||+.||+|++|||+.+.++ +.++..+++.. +..|.|+
T Consensus 12 ~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~-~~~v~l~ 89 (100)
T 2edp_A 12 YVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGS-FRILKLI 89 (100)
T ss_dssp EEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTC-CSSCEEE
T ss_pred EEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhC-CCeEEEE
Confidence 3444333345799999863 357999999999999999 8999999999999999997 55677777664 6889999
Q ss_pred EecCCc
Q psy9257 425 IRDRPL 430 (530)
Q Consensus 425 VrR~~~ 430 (530)
|+|+++
T Consensus 90 v~R~~~ 95 (100)
T 2edp_A 90 VRRRNS 95 (100)
T ss_dssp EEECCC
T ss_pred EEeCCC
Confidence 988754
No 194
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.01 E-value=1.7e-09 Score=90.22 Aligned_cols=80 Identities=21% Similarity=0.364 Sum_probs=67.7
Q ss_pred CceeeEEeccCCCCccceeecc-------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK-------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSV 499 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~-------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~t 499 (530)
+++++|+|.++.. .|||.+.. |. |..|.++++|+++| |+.||+|++|||+++.+++..++...++..++.
T Consensus 3 g~~~~v~l~~~~~-~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (98)
T 2opg_A 3 GCETTIEISKGRT-GLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQR 81 (98)
T ss_dssp CEEEEEEEECBTT-BTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEEEECCC-cccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3566777777654 48999863 33 88999999999999 999999999999999999888899999888899
Q ss_pred EEEEEEeCcc
Q psy9257 500 LTLTLIPTSM 509 (530)
Q Consensus 500 VtLtVip~~~ 509 (530)
+.|+|.|...
T Consensus 82 v~l~v~R~~~ 91 (98)
T 2opg_A 82 VRLTLYRDEA 91 (98)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEcCCC
Confidence 9999988653
No 195
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.01 E-value=1.3e-09 Score=94.76 Aligned_cols=77 Identities=29% Similarity=0.383 Sum_probs=63.8
Q ss_pred EeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh--CCCCeEEEEEecC
Q psy9257 352 LCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA--APVNNIRVVIRDR 428 (530)
Q Consensus 352 L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~--a~G~~VtLtVrR~ 428 (530)
+.+....++||.+...+.+.+|..|.+||||++|||+.||+|++|||+.+...+.+++..+++. ..+..|.|.|..+
T Consensus 22 ~l~~~~~g~G~~l~~~~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~~ 100 (101)
T 3qik_A 22 LILPQEEDYGFDIEEKNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVATK 100 (101)
T ss_dssp EECCCSSSSSEEEEEETTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEeCCCcccEEEEccCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEecC
Confidence 3333456689999988889999999999999999999999999999999975566668888876 3678888887653
No 196
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.01 E-value=1.6e-09 Score=89.73 Aligned_cols=71 Identities=17% Similarity=0.303 Sum_probs=62.2
Q ss_pred CCCccceeeccCc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcch
Q psy9257 440 SSGHFGFHFNKGQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSMY 510 (530)
Q Consensus 440 ~~g~LGfs~~~Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~~ 510 (530)
....+||.+.+|. |..|.++|+|+++| |+.||+|++|||+.+.+++.+++..++++.++.++|++.+...+
T Consensus 11 ~~~~~G~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~~ 83 (88)
T 3e17_A 11 ANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLEH 83 (88)
T ss_dssp TBCCCCEEEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC---
T ss_pred CCCCCCEEEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCcc
Confidence 3456899987776 88999999999999 99999999999999999999999999999999999999887644
No 197
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.00 E-value=1.7e-09 Score=100.41 Aligned_cols=77 Identities=25% Similarity=0.400 Sum_probs=64.8
Q ss_pred CeeEEEEEec-----------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 358 GLIGLRVCAI-----------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 358 G~LG~~V~~~-----------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
++|||++.++ ..|++|..|.++|+|++ ||+.||+|++|||+.+.++.+.++..+++.. +..|.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF-QNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEE
Confidence 3478888763 46899999999999999 9999999999999999999988888888776 458999998
Q ss_pred c---CCceeeEEe
Q psy9257 427 D---RPLERTVTL 436 (530)
Q Consensus 427 R---~~~e~tVtL 436 (530)
| ++++.++.+
T Consensus 80 r~~~~G~~~~~~v 92 (195)
T 2qbw_A 80 REVGNGAKQEIRV 92 (195)
T ss_dssp EECSSSCEEEEEE
T ss_pred EcCCCCCCceeEe
Confidence 8 666655544
No 198
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.00 E-value=2.5e-09 Score=88.40 Aligned_cols=76 Identities=18% Similarity=0.402 Sum_probs=65.0
Q ss_pred eeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
.++|+|.++.. .|||.+.+ |. |..|.++++|+++| |+.||+|++|||+.+.+++..++...++..+
T Consensus 4 ~~~v~l~k~~~-g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 4 IMEVNLLKGPK-GLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp EEEEEEECCTT-CSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEECCC-CCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45677777754 49999874 23 88999999999999 9999999999999999998889999998888
Q ss_pred CEEEEEEEeC
Q psy9257 498 SVLTLTLIPT 507 (530)
Q Consensus 498 ~tVtLtVip~ 507 (530)
+.+.|+|.|.
T Consensus 83 ~~v~l~v~R~ 92 (94)
T 2fe5_A 83 DMVYLKVAKP 92 (94)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEcC
Confidence 8999999775
No 199
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=4.4e-10 Score=98.56 Aligned_cols=82 Identities=22% Similarity=0.379 Sum_probs=67.1
Q ss_pred ccceEEEeccCCC--eeEEEEEecC----CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 346 GIRELVLCKDASG--LIGLRVCAIN----EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 346 ~Vr~V~L~K~s~G--~LG~~V~~~~----~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
..+.+.+.|.... .|||++...+ .|++|..|.++++|+++||+.||+|++|||+.+.++...++..+++. .
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~ 91 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---P 91 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---S
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---C
Confidence 4567777776553 5899987632 57999999999999999999999999999999999887677777753 4
Q ss_pred eEEEEEecCCc
Q psy9257 420 NIRVVIRDRPL 430 (530)
Q Consensus 420 ~VtLtVrR~~~ 430 (530)
.+.|+|+|.+.
T Consensus 92 ~v~l~v~R~p~ 102 (114)
T 2d8i_A 92 SLGLLVRTYPE 102 (114)
T ss_dssp EEEEEEEECCC
T ss_pred cEEEEEEECCC
Confidence 88999988653
No 200
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.00 E-value=8.3e-10 Score=94.82 Aligned_cols=80 Identities=20% Similarity=0.358 Sum_probs=64.9
Q ss_pred cCCCeeEEEEEec------------------CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC
Q psy9257 355 DASGLIGLRVCAI------------------NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA 416 (530)
Q Consensus 355 ~s~G~LG~~V~~~------------------~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a 416 (530)
..+++||+.+... ..|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +...++
T Consensus 3 v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~-- 78 (112)
T 2p3w_A 3 HMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSE--LQEAVL-- 78 (112)
T ss_dssp CCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHHH--
T ss_pred cccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH--HHHHHh--
Confidence 4456778877652 468999999999999999999999999999999988644 555564
Q ss_pred CCCeEEEEEecCCceeeEEecc
Q psy9257 417 PVNNIRVVIRDRPLERTVTLHR 438 (530)
Q Consensus 417 ~G~~VtLtVrR~~~e~tVtL~k 438 (530)
.++.+.|+|.|+++.+++++..
T Consensus 79 ~g~~v~l~v~R~g~~~~~~v~~ 100 (112)
T 2p3w_A 79 TESPLLLEVRRGNDDLLFSIAP 100 (112)
T ss_dssp HCSSEEEEEEETTEEEEEEECC
T ss_pred CCCeEEEEEEECCEEEEEEEEE
Confidence 3678999999988887777653
No 201
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.00 E-value=1.7e-09 Score=90.09 Aligned_cols=77 Identities=26% Similarity=0.447 Sum_probs=65.7
Q ss_pred eeeEEeccCCCCccceeeccC----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGS 498 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~ 498 (530)
.++|+|.++. ..|||.+.++ . |..|.++++|+++| |+.||+|++|||+++.+++.+++..+++..++
T Consensus 4 ~~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 82 (97)
T 2jil_A 4 TVEVTLHKEG-NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQ 82 (97)
T ss_dssp EEEEEEECBT-TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred EEEEEEEeCC-CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3456666643 4599998643 2 88999999999999 99999999999999999888999999998899
Q ss_pred EEEEEEEeCc
Q psy9257 499 VLTLTLIPTS 508 (530)
Q Consensus 499 tVtLtVip~~ 508 (530)
.+.|+|.|..
T Consensus 83 ~v~l~v~R~~ 92 (97)
T 2jil_A 83 EAALLIEYDV 92 (97)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEeCC
Confidence 9999998865
No 202
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=3.1e-10 Score=101.60 Aligned_cols=79 Identities=19% Similarity=0.225 Sum_probs=68.1
Q ss_pred eEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeEEEEEe
Q psy9257 349 ELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNIRVVIR 426 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~VtLtVr 426 (530)
++.+.+. ..+|||.+.....+++|..|.++++|+++| |+.||+|++|||+.|.+.+..++..+++.. .++.|.|+|.
T Consensus 30 ~~~l~k~-~~glG~~i~~~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~ 108 (126)
T 1wif_A 30 QTKLTVG-NLGLGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAY 108 (126)
T ss_dssp EEEEECC-TTCCCCCEEEETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEE
T ss_pred EEEEecC-CceEeEEEEcCCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEE
Confidence 4555555 455999988777889999999999999999 999999999999999877788899999863 5789999999
Q ss_pred cC
Q psy9257 427 DR 428 (530)
Q Consensus 427 R~ 428 (530)
|+
T Consensus 109 R~ 110 (126)
T 1wif_A 109 RG 110 (126)
T ss_dssp SS
T ss_pred EC
Confidence 87
No 203
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.00 E-value=2.4e-09 Score=89.08 Aligned_cols=78 Identities=24% Similarity=0.402 Sum_probs=66.7
Q ss_pred eeeEEeccC-CCCccceeecc-----Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 431 ERTVTLHRD-SSGHFGFHFNK-----GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 431 e~tVtL~kd-~~g~LGfs~~~-----Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
.++|+|.+. ....|||.+.+ |. |..|.++|+|+++| |+.||+|++|||+++.+++..++...+++.++.+.|
T Consensus 4 ~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 83 (95)
T 2vwr_A 4 ILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNL 83 (95)
T ss_dssp EEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred EEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 456677764 44569999853 33 88999999999999 999999999999999999888899999888999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.|..
T Consensus 84 ~v~R~~ 89 (95)
T 2vwr_A 84 TIARPG 89 (95)
T ss_dssp EEEEES
T ss_pred EEEcCC
Confidence 998864
No 204
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=1.4e-09 Score=93.89 Aligned_cols=80 Identities=28% Similarity=0.510 Sum_probs=69.4
Q ss_pred ceeeEEeccCCCCccceeeccC--------------cEEEEccCCHHHH-cCCCCCCEEEEEcCeecCCCChHHHHHHHH
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG--------------QIVSLVKDSSAAR-NGLLVNHNILEVNGANVVGLKDKELLEAME 494 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G--------------vV~sVv~gSpAar-AGLr~GDrILeVNGq~V~gls~eeVv~iLk 494 (530)
+.++|.|.++....|||.+.++ .|..|.++++|++ +||+.||+|++|||+.+.++..+++..+|+
T Consensus 10 ~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~ 89 (114)
T 1uew_A 10 QTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIK 89 (114)
T ss_dssp CCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHH
T ss_pred cceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567777777667799998532 4899999999999 999999999999999999998899999999
Q ss_pred hCCCEEEEEEEeCcc
Q psy9257 495 KGGSVLTLTLIPTSM 509 (530)
Q Consensus 495 rsG~tVtLtVip~~~ 509 (530)
+.++.+.|+|.|...
T Consensus 90 ~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 90 DAGLSVTLRIIPQEE 104 (114)
T ss_dssp HTTTEEEEEECCCSC
T ss_pred cCCCeEEEEEEeCCc
Confidence 899999999988753
No 205
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.99 E-value=4.6e-10 Score=94.90 Aligned_cols=77 Identities=19% Similarity=0.384 Sum_probs=63.8
Q ss_pred EEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCC
Q psy9257 350 LVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRP 429 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~ 429 (530)
+.+.+. ..+|||.+.. ..+++|..|.++++|+++||+.||+|++|||+.+.+++..++..+++.. +..|.|+|+|+.
T Consensus 19 v~l~~~-~~g~G~~~~~-~~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 95 (100)
T 1whd_A 19 ITIRRG-KDGFGFTICC-DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRVS 95 (100)
T ss_dssp EEEECC-SSSSSCBCCC-SSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred EEEECC-CCeeeEEEeC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 444444 4558988874 4789999999999999999999999999999999998888888888775 456899998863
No 206
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=2e-09 Score=91.68 Aligned_cols=80 Identities=21% Similarity=0.367 Sum_probs=68.2
Q ss_pred CceeeEEeccCCCCccceeec-----c---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHH
Q psy9257 429 PLERTVTLHRDSSGHFGFHFN-----K---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEA 492 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~-----~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~i 492 (530)
++.++|+|.++. ..|||.+. + |. |..|.++|+|+++| |+.||+|++|||+.+.+++..++...
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456677777665 44899987 2 33 99999999999999 99999999999999998888899999
Q ss_pred HHhCCCEEEEEEEeCcc
Q psy9257 493 MEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 493 LkrsG~tVtLtVip~~~ 509 (530)
+++.++.+.|+|.|...
T Consensus 87 ~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHTTSEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99889999999988753
No 207
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=1.7e-09 Score=94.52 Aligned_cols=82 Identities=22% Similarity=0.466 Sum_probs=69.9
Q ss_pred ecCCceeeEEeccCCCCccceeeccC---------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHH
Q psy9257 426 RDRPLERTVTLHRDSSGHFGFHFNKG---------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAME 494 (530)
Q Consensus 426 rR~~~e~tVtL~kd~~g~LGfs~~~G---------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLk 494 (530)
...++.++|+|.++.. .|||.+.+| . |..|.++|+|+++| |+.||+|++|||++|.+++.+++..+++
T Consensus 21 ~~~~~~~~v~L~k~~~-glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 99 (117)
T 2fne_A 21 QSMPQCKSITLERGPD-GLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK 99 (117)
T ss_dssp --CCEEEEEEECCBTT-BTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred cCCCccEEEEEEeCCC-cccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3445677888888774 599999753 2 88999999999999 9999999999999999999899999999
Q ss_pred hCCCEEEEEEEeCc
Q psy9257 495 KGGSVLTLTLIPTS 508 (530)
Q Consensus 495 rsG~tVtLtVip~~ 508 (530)
+.++.++|+|.|..
T Consensus 100 ~~~~~v~l~v~R~g 113 (117)
T 2fne_A 100 RTKGTVTLMVLSSD 113 (117)
T ss_dssp HCCSSEEEEEEECS
T ss_pred cCCCeEEEEEEeCC
Confidence 88888999998865
No 208
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.99 E-value=6.2e-10 Score=90.43 Aligned_cols=77 Identities=23% Similarity=0.368 Sum_probs=66.0
Q ss_pred ceeeEEeccCCCCccceeeccC---cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEe
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG---QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIP 506 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G---vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip 506 (530)
+.++|+|.++.. .|||.+..+ .|..|.++++|+++||+.||+|++|||+++.+++.+++..++++.++.++|+|.|
T Consensus 2 ~~r~v~l~~~~~-g~G~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 80 (83)
T 2kv8_A 2 RVRSVEVARGRA-GYGFTLSGQAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAE 80 (83)
T ss_dssp CEEEEEECCCSS-CCSCBCCCSSSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEEC
T ss_pred CcEEEEEEeCCC-cccEEEEcCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEc
Confidence 456788888774 489988643 3889999999999999999999999999999999889999998777889999987
Q ss_pred C
Q psy9257 507 T 507 (530)
Q Consensus 507 ~ 507 (530)
.
T Consensus 81 ~ 81 (83)
T 2kv8_A 81 G 81 (83)
T ss_dssp C
T ss_pred C
Confidence 5
No 209
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=2.8e-09 Score=91.04 Aligned_cols=82 Identities=29% Similarity=0.450 Sum_probs=69.2
Q ss_pred CceeeEEeccCCCCccceeecc---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
++.++|+|.++.. .|||.+.. |. |..|.++++|+++| |+.||+|++|||+++.+++..++...+++.+
T Consensus 7 ~~~~~v~l~~~~~-glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 7 GYVFTVELERGPS-GLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CCEEEEEEECCTT-CCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CcEEEEEEEECCC-ccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3456677776654 49999864 33 88999999999999 9999999999999999999999999999889
Q ss_pred CEEEEEEEeCcchh
Q psy9257 498 SVLTLTLIPTSMYQ 511 (530)
Q Consensus 498 ~tVtLtVip~~~~e 511 (530)
+.+.|+|.|.....
T Consensus 86 ~~v~l~v~R~~~~~ 99 (110)
T 1um1_A 86 KKMRFLVAKSDVET 99 (110)
T ss_dssp SEEEEEEECCCHHH
T ss_pred CeEEEEEEeCCcce
Confidence 99999999876443
No 210
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.99 E-value=1.3e-09 Score=89.61 Aligned_cols=78 Identities=26% Similarity=0.450 Sum_probs=65.7
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--CCE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG--GSV 499 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs--G~t 499 (530)
++++|+|.++.. .|||.+.+| .|..|.++|+|+++| |+.||+|++|||+++.+++..++..++++. ++.
T Consensus 2 ~~~~v~l~~~~~-g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 80 (90)
T 2q9v_A 2 MEQDIFLWRKET-GFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH 80 (90)
T ss_dssp EEEEEEEECBTT-BCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CcEEEEEEECCC-ccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 356777777764 499999754 289999999999999 999999999999999999889999998865 448
Q ss_pred EEEEEEeCc
Q psy9257 500 LTLTLIPTS 508 (530)
Q Consensus 500 VtLtVip~~ 508 (530)
++|+|.|..
T Consensus 81 v~l~v~R~~ 89 (90)
T 2q9v_A 81 VNLTVRQTR 89 (90)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 999998753
No 211
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.99 E-value=2.2e-09 Score=91.16 Aligned_cols=78 Identities=26% Similarity=0.442 Sum_probs=68.3
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
..++|+|.+...+.|||.+..+ . |..|.++++|+++||+.||+|++|||+.|.+++.+++..+|+. ++.+.|
T Consensus 15 ~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~l 93 (104)
T 1wi2_A 15 LPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREISM 93 (104)
T ss_dssp CCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEEE
T ss_pred CCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEEE
Confidence 4577888888777899999753 3 8999999999999999999999999999999888999999988 788999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.+..
T Consensus 94 ~v~r~~ 99 (104)
T 1wi2_A 94 RVRFFS 99 (104)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 998754
No 212
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.99 E-value=2.8e-09 Score=87.26 Aligned_cols=75 Identities=25% Similarity=0.404 Sum_probs=62.7
Q ss_pred eeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
++|++. . ...|||.+.+| .|..|.++++|+++||+.||+|++|||+++.++...++..++++.++.+.|+|
T Consensus 5 ~~v~l~-~-~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v 82 (88)
T 2uzc_A 5 YSVSLV-G-PAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTL 82 (88)
T ss_dssp EEEEEE-S-SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEE
T ss_pred EEEEEc-C-CCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 445552 2 24589998753 28899999999999999999999999999999988889988988899999999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.|..
T Consensus 83 ~R~g 86 (88)
T 2uzc_A 83 QRES 86 (88)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 8754
No 213
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.99 E-value=2.3e-09 Score=90.28 Aligned_cols=78 Identities=27% Similarity=0.433 Sum_probs=66.7
Q ss_pred eeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
.++|+|.++. ..|||.+.+ |. |..|.++++|+++| |+.||+|++|||+++.+++..++...+++.+
T Consensus 5 ~~~v~l~k~~-~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 83 (102)
T 2i1n_A 5 YEEIVLERGN-SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG 83 (102)
T ss_dssp EEEEEEECBT-TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEECC-CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3566677664 459999974 33 88999999999999 9999999999999999999899999999889
Q ss_pred CEEEEEEEeCcc
Q psy9257 498 SVLTLTLIPTSM 509 (530)
Q Consensus 498 ~tVtLtVip~~~ 509 (530)
+.+.|+|.|...
T Consensus 84 ~~v~l~v~R~~~ 95 (102)
T 2i1n_A 84 PVVRLVVRRRQP 95 (102)
T ss_dssp SEEEEEEEEECC
T ss_pred CeEEEEEEeCCC
Confidence 999999988653
No 214
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.98 E-value=2.7e-09 Score=93.42 Aligned_cols=77 Identities=23% Similarity=0.371 Sum_probs=68.7
Q ss_pred eeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
.+++++.++..+.|||.+.+| .|..|.++++|+++| |+.||+|++|||+++.+++.+++..++++.++.++|
T Consensus 20 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l 99 (125)
T 3hpk_A 20 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 99 (125)
T ss_dssp EEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 467778888888899998754 288999999999999 999999999999999999999999999988889999
Q ss_pred EEEeC
Q psy9257 503 TLIPT 507 (530)
Q Consensus 503 tVip~ 507 (530)
+|.+.
T Consensus 100 ~v~r~ 104 (125)
T 3hpk_A 100 HYNKL 104 (125)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99874
No 215
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=3e-09 Score=89.19 Aligned_cols=71 Identities=30% Similarity=0.467 Sum_probs=60.1
Q ss_pred eccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecC
Q psy9257 353 CKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDR 428 (530)
Q Consensus 353 ~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~ 428 (530)
.......|||.+.. | +|..|.++|+|+++||+.||+|++|||+.+.+.+..++..+++.. +..|.|+|.+.
T Consensus 19 ~~~~~~~lG~~~~~---G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~p~ 89 (90)
T 1y7n_A 19 RPDLRYQLGFSVQN---G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA-VGEIHMKTMPA 89 (90)
T ss_dssp ESSTTSCCCEEEET---T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC-CEEEEEEEECC
T ss_pred eCCCccccCeEecC---C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 34556679998853 4 899999999999999999999999999999888888899999864 78888888753
No 216
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=2.7e-09 Score=88.07 Aligned_cols=78 Identities=23% Similarity=0.377 Sum_probs=66.3
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
..++|+|.+.. ..|||.+..+ . |..|.++++|+++| |+.||+|++|||+++.+++.+++..+++..++.+.
T Consensus 5 ~~r~v~l~k~~-~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (93)
T 2dkr_A 5 SSGVVELPKTD-EGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVK 83 (93)
T ss_dssp CSCEEEEECCT-TCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEeCC-CCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 45677777765 5599999742 2 89999999999996 99999999999999999988899999998888999
Q ss_pred EEEEeCc
Q psy9257 502 LTLIPTS 508 (530)
Q Consensus 502 LtVip~~ 508 (530)
|+|.|..
T Consensus 84 l~v~r~~ 90 (93)
T 2dkr_A 84 LVVRSGP 90 (93)
T ss_dssp EEECCCC
T ss_pred EEEEeCC
Confidence 9998754
No 217
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.98 E-value=3.1e-09 Score=91.65 Aligned_cols=79 Identities=32% Similarity=0.536 Sum_probs=67.3
Q ss_pred CceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
.+.++|+|.++..+ |||.+.++ .|..|.++++|+++| |+.||+|++|||++|.+++..++..++++.++.+
T Consensus 23 ~~~~~v~l~~~~~g-lG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v 101 (112)
T 2r4h_A 23 MDFYTVELERGAKG-FGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRV 101 (112)
T ss_dssp CCEEEEEEECBTTB-TSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CceEEEEEEcCCCc-cCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35566777666544 99998754 388999999999999 9999999999999999998888998898889999
Q ss_pred EEEEEeCc
Q psy9257 501 TLTLIPTS 508 (530)
Q Consensus 501 tLtVip~~ 508 (530)
+|+|.|..
T Consensus 102 ~l~v~R~~ 109 (112)
T 2r4h_A 102 RLFLKRGE 109 (112)
T ss_dssp EEEEECCE
T ss_pred EEEEEeCC
Confidence 99998764
No 218
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.98 E-value=3.1e-09 Score=86.47 Aligned_cols=73 Identities=32% Similarity=0.462 Sum_probs=60.9
Q ss_pred eEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--CCEEEE
Q psy9257 433 TVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG--GSVLTL 502 (530)
Q Consensus 433 tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs--G~tVtL 502 (530)
++++.+... .|||.+.++ .|..|.++++|+++| |+.||+|++|||+++.+++.+++..+++.. ++.+.|
T Consensus 3 ~v~l~k~~~-g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 81 (85)
T 2i04_A 3 HTKLRKSSR-GFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 81 (85)
T ss_dssp EEEEECBTT-BSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEECCC-CCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 455555544 489988653 388999999999999 999999999999999999888999999865 789999
Q ss_pred EEEe
Q psy9257 503 TLIP 506 (530)
Q Consensus 503 tVip 506 (530)
+|.|
T Consensus 82 ~v~R 85 (85)
T 2i04_A 82 ELCR 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8854
No 219
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.98 E-value=4.1e-09 Score=88.08 Aligned_cols=79 Identities=27% Similarity=0.393 Sum_probs=66.2
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
..++++|.+. .+.|||.+..+ . |..|.++++|+++| |+.||+|++|||+.+.+++.+++..+++..++.+.
T Consensus 5 ~~~~v~l~~~-~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 83 (97)
T 1n7e_A 5 IIYTVELKRY-GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT 83 (97)
T ss_dssp CEEEEEEECT-TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred eEEEEEEEeC-CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3456666554 44599998643 2 89999999999999 99999999999999999988899999988889999
Q ss_pred EEEEeCcc
Q psy9257 502 LTLIPTSM 509 (530)
Q Consensus 502 LtVip~~~ 509 (530)
|+|.|...
T Consensus 84 l~v~R~~~ 91 (97)
T 1n7e_A 84 LKIKKQTD 91 (97)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99987653
No 220
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.98 E-value=2e-09 Score=91.43 Aligned_cols=78 Identities=17% Similarity=0.295 Sum_probs=67.0
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC--CCCCCEEEEEcCeecCCCChHHHHHHHHhCCC--
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG--LLVNHNILEVNGANVVGLKDKELLEAMEKGGS-- 498 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG--Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~-- 498 (530)
..+.+.|.++..+.|||.+.+| .|..|.++++|+++| |+.||+|++|||++|.++++.++..++++.++
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~ 96 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERH 96 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSB
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccC
Confidence 4566778887777899998653 288999999999999 99999999999999999999999999987654
Q ss_pred --EEEEEEEeC
Q psy9257 499 --VLTLTLIPT 507 (530)
Q Consensus 499 --tVtLtVip~ 507 (530)
.+.|+|.|.
T Consensus 97 ~~~v~l~v~r~ 107 (107)
T 3nfk_A 97 SGELMLLVRPN 107 (107)
T ss_dssp TTBEEEEEECC
T ss_pred CcEEEEEEEcC
Confidence 899998763
No 221
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=3.4e-09 Score=90.26 Aligned_cols=78 Identities=28% Similarity=0.528 Sum_probs=67.0
Q ss_pred ceeeEEeccCCCCccceeecc--------------Cc-EEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHH
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK--------------GQ-IVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAM 493 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~--------------Gv-V~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iL 493 (530)
+.++|+|.++ ...|||.+.+ |. |..|.++++|+++ ||+.||+|++|||++|.++++.++..++
T Consensus 8 ~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~ 86 (107)
T 1uhp_A 8 KSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAF 86 (107)
T ss_dssp EEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4566777776 4568999863 23 8899999999999 8999999999999999999999999999
Q ss_pred HhCCCEEEEEEEeCc
Q psy9257 494 EKGGSVLTLTLIPTS 508 (530)
Q Consensus 494 krsG~tVtLtVip~~ 508 (530)
++.++.+.|+|.|..
T Consensus 87 ~~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 87 KTAKEPIVVQVLRRT 101 (107)
T ss_dssp HHCCSSEEEEEEECC
T ss_pred HcCCCcEEEEEEeCC
Confidence 988899999998764
No 222
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.97 E-value=2.1e-09 Score=91.83 Aligned_cols=77 Identities=25% Similarity=0.450 Sum_probs=66.7
Q ss_pred eeeEEeccCCCCccceeecc----Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK----GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~----Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
.+.+.|.|.....|||.+.. |. |..|.++++|+++| |+.||+|++|||++|.+++.+++..+|+..++.++|+|
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V 92 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKV 92 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEE
T ss_pred cEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 45677777777779999863 33 88999999999999 99999999999999999777899999998888999999
Q ss_pred EeC
Q psy9257 505 IPT 507 (530)
Q Consensus 505 ip~ 507 (530)
.+.
T Consensus 93 ~~~ 95 (97)
T 2ejy_A 93 IPN 95 (97)
T ss_dssp ECC
T ss_pred EEC
Confidence 875
No 223
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.97 E-value=2.3e-09 Score=88.11 Aligned_cols=75 Identities=27% Similarity=0.392 Sum_probs=63.0
Q ss_pred eeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
+++++.. ...|||.+.+| .|..|.++++|+++||+.||+|++|||+++.+++..++..++++.++.+.|+|
T Consensus 5 ~~v~~~~--~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v 82 (89)
T 2q3g_A 5 FKVVLEG--PAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGL 82 (89)
T ss_dssp EEEEEES--SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEE
T ss_pred EEEEEcC--CCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEE
Confidence 3444543 35699998653 28899999999999999999999999999999988899999988899999999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.|..
T Consensus 83 ~R~~ 86 (89)
T 2q3g_A 83 SRAI 86 (89)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 8754
No 224
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=5.5e-10 Score=97.19 Aligned_cols=80 Identities=25% Similarity=0.321 Sum_probs=67.0
Q ss_pred cceEEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 347 IRELVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
.|.|.+.+. .+.|||.+. ...+++|..|.++++|+++||+.||+|++|||+.+.+++.+++..+++...+..+.|+|.
T Consensus 16 ~r~v~l~~~-~~~~G~~l~-~~~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~ 93 (111)
T 1vae_A 16 PRGIHFTVE-EGDLGFTLR-GNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVV 93 (111)
T ss_dssp CCCCCEECC-SSCCSCCEE-SSSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEE
T ss_pred CeEEEEEcC-CCcccEEEe-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEE
Confidence 355666664 466899886 446899999999999999999999999999999999777777889998877777899887
Q ss_pred cC
Q psy9257 427 DR 428 (530)
Q Consensus 427 R~ 428 (530)
|.
T Consensus 94 ~~ 95 (111)
T 1vae_A 94 SL 95 (111)
T ss_dssp CE
T ss_pred ec
Confidence 63
No 225
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=2.9e-09 Score=92.90 Aligned_cols=78 Identities=18% Similarity=0.348 Sum_probs=67.7
Q ss_pred ceeeEEeccCCCCccceeeccC-----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
+.++|+|.++. ..|||.+.+| . |..|.++|+|+++| |+.||+|++|||+.|.+++.+++..++++.
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44567777765 5699999742 3 88999999999999 999999999999999999999999999988
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.++|+|.|..
T Consensus 103 g~~v~l~v~R~~ 114 (117)
T 2byg_A 103 SEVVYLKVGKPT 114 (117)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEeCC
Confidence 999999998754
No 226
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.97 E-value=4.1e-09 Score=90.72 Aligned_cols=79 Identities=18% Similarity=0.381 Sum_probs=68.8
Q ss_pred CCceeeEEeccCCCCccceeeccC-c----EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCE
Q psy9257 428 RPLERTVTLHRDSSGHFGFHFNKG-Q----IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK--GGSV 499 (530)
Q Consensus 428 ~~~e~tVtL~kd~~g~LGfs~~~G-v----V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~t 499 (530)
+++.++|.|.|.. ..|||++.++ . |..|.++++|++.| |++||.|++|||++|.++++.+++++|++ .|.+
T Consensus 3 ~g~~k~V~l~K~~-~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~ 81 (95)
T 3gge_A 3 KGIEKEVNVYKSE-DSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEEL 81 (95)
T ss_dssp CEEEEEEEEECCS-SCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCE
T ss_pred CCeEEEEEEEECC-CCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCE
Confidence 4567888888876 5699999742 1 89999999999998 99999999999999999999999999996 6779
Q ss_pred EEEEEEeC
Q psy9257 500 LTLTLIPT 507 (530)
Q Consensus 500 VtLtVip~ 507 (530)
++|++++.
T Consensus 82 ~~L~lv~p 89 (95)
T 3gge_A 82 FTMKLIEP 89 (95)
T ss_dssp EEEEEEEE
T ss_pred EEEEEECc
Confidence 99988754
No 227
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=6.8e-10 Score=96.31 Aligned_cols=85 Identities=16% Similarity=0.317 Sum_probs=72.1
Q ss_pred CCceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHc--CCCCCCEEEEEcCeecCCCChHHHHHHHHhCC-
Q psy9257 428 RPLERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARN--GLLVNHNILEVNGANVVGLKDKELLEAMEKGG- 497 (530)
Q Consensus 428 ~~~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarA--GLr~GDrILeVNGq~V~gls~eeVv~iLkrsG- 497 (530)
..+.++|+|.+...+.|||.+.+| .|..|.++++|+++ ||+.||+|++|||++|.++++.++..+++..+
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~ 92 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 92 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 345678888888878899999754 28899999999999 99999999999999999999999999998664
Q ss_pred ---CEEEEEEEeCcchhh
Q psy9257 498 ---SVLTLTLIPTSMYQH 512 (530)
Q Consensus 498 ---~tVtLtVip~~~~e~ 512 (530)
..+.|+|.|....+.
T Consensus 93 ~~~~~v~l~v~R~~~~~~ 110 (119)
T 2cs5_A 93 RHSGELMLLVRPNAVYDV 110 (119)
T ss_dssp CCSSCEEEEEECCCCCCC
T ss_pred cCCCEEEEEEEcccccCc
Confidence 589999988765443
No 228
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.96 E-value=3.2e-09 Score=88.10 Aligned_cols=78 Identities=22% Similarity=0.445 Sum_probs=66.0
Q ss_pred eeeEEeccCCCCccceeeccC------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
.+.++|.++. ..|||.+..+ .|..|.++++|+++| |+.||+|++|||+++.+++.+++..+|+..++.++|+
T Consensus 5 ~r~v~l~k~~-~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 83 (93)
T 3o46_A 5 VKIIRLVKNR-EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFK 83 (93)
T ss_dssp CEEEEEEESS-SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEE
T ss_pred EEEEEEEeCC-CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 4556677764 3699998644 289999999999999 9999999999999999999999999999888899999
Q ss_pred EEeCcc
Q psy9257 504 LIPTSM 509 (530)
Q Consensus 504 Vip~~~ 509 (530)
|.+...
T Consensus 84 v~~~~~ 89 (93)
T 3o46_A 84 IIPGSK 89 (93)
T ss_dssp EECC--
T ss_pred EEeCCC
Confidence 998654
No 229
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.96 E-value=3e-09 Score=89.13 Aligned_cols=75 Identities=24% Similarity=0.424 Sum_probs=63.1
Q ss_pred eEEeccCCCCccceeeccC--------------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCC
Q psy9257 433 TVTLHRDSSGHFGFHFNKG--------------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGS 498 (530)
Q Consensus 433 tVtL~kd~~g~LGfs~~~G--------------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~ 498 (530)
++.+.+. ...+||.+..+ .|..|.++|+|+++||+.||+|++|||+++.+++.+++...+++.++
T Consensus 5 ~v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 5 PIVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CEEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 4455554 34488887622 38899999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeCc
Q psy9257 499 VLTLTLIPTS 508 (530)
Q Consensus 499 tVtLtVip~~ 508 (530)
.+.|++.|..
T Consensus 84 ~v~l~v~r~~ 93 (99)
T 3khf_A 84 KISLRTTALE 93 (99)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEEECC
Confidence 9999999865
No 230
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.96 E-value=1.7e-09 Score=95.07 Aligned_cols=80 Identities=19% Similarity=0.302 Sum_probs=68.6
Q ss_pred ceeeEEeccCCCCccceeecc---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecC-CCChHHHHHHHHhCC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVV-GLKDKELLEAMEKGG 497 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~-gls~eeVv~iLkrsG 497 (530)
+.++|+|.+...+.|||.+.+ |. |..|.++++|+++| |+.||+|++|||++|. +++.+++..+|+..+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~ 104 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTT 104 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCC
T ss_pred ceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC
Confidence 455666777766679999853 33 88999999999999 9999999999999997 999999999999999
Q ss_pred CEEEEEEEeCcc
Q psy9257 498 SVLTLTLIPTSM 509 (530)
Q Consensus 498 ~tVtLtVip~~~ 509 (530)
+.++|+|.|...
T Consensus 105 ~~v~l~v~r~~~ 116 (128)
T 2db5_A 105 GSLRLIVAREPV 116 (128)
T ss_dssp SEEEEEEEECCC
T ss_pred CeEEEEEEcCCC
Confidence 999999998753
No 231
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=4e-10 Score=94.77 Aligned_cols=79 Identities=22% Similarity=0.285 Sum_probs=67.4
Q ss_pred ceEEEeccCC-CeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEe
Q psy9257 348 RELVLCKDAS-GLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIR 426 (530)
Q Consensus 348 r~V~L~K~s~-G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVr 426 (530)
++|.+.+... +.|||.+.. ..+++|..|.++++|+ +||+.||+|++|||+.|.++++.++..+++. .++.|.|+|.
T Consensus 10 ~~v~l~~~~~~~~~G~~l~~-~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~ 86 (96)
T 2edv_A 10 HTVKIDKDTLLQDYGFHISE-SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVV 86 (96)
T ss_dssp EEEEECCCSSSCSCSBCCCS-SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEE
T ss_pred EEEEEEECCCCCcccEEEec-CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEE
Confidence 4677777653 468999874 6799999999999996 9999999999999999999988888888877 5788999998
Q ss_pred cCC
Q psy9257 427 DRP 429 (530)
Q Consensus 427 R~~ 429 (530)
|+.
T Consensus 87 R~~ 89 (96)
T 2edv_A 87 RCT 89 (96)
T ss_dssp ECC
T ss_pred ECC
Confidence 864
No 232
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.96 E-value=2.2e-09 Score=92.64 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=68.1
Q ss_pred ceeeEEeccCCCCccceeeccC---------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecC-CCChHHHHHHHHhCC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG---------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVV-GLKDKELLEAMEKGG 497 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G---------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~-gls~eeVv~iLkrsG 497 (530)
+.++++|.+...+.|||.+.++ . |..|.++|+|+++| |+.||+|++|||+.+. +++.+++..++++.+
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~ 99 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAK 99 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCC
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC
Confidence 3455666666666789988632 2 77899999999999 9999999999999998 888899999999899
Q ss_pred CEEEEEEEeCcch
Q psy9257 498 SVLTLTLIPTSMY 510 (530)
Q Consensus 498 ~tVtLtVip~~~~ 510 (530)
+.+.|+|.|....
T Consensus 100 ~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 100 DTVQLVIARGSLP 112 (117)
T ss_dssp SEEEEEEESSCCG
T ss_pred CEEEEEEEeCCcc
Confidence 9999999987644
No 233
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.96 E-value=1.8e-09 Score=112.85 Aligned_cols=84 Identities=24% Similarity=0.336 Sum_probs=71.4
Q ss_pred ccceEEEeccCCCeeEEEEEe-cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEE
Q psy9257 346 GIRELVLCKDASGLIGLRVCA-INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRV 423 (530)
Q Consensus 346 ~Vr~V~L~K~s~G~LG~~V~~-~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtL 423 (530)
.++.+.+.+. ++|||++.+ ...|++|..|.+||+|+++||+.||+|++|||..+.+++.+++..+++. ..|+.|+|
T Consensus 9 ~~~~v~~~k~--~~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l 86 (391)
T 3tsz_A 9 SMKLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 86 (391)
T ss_dssp CEEEEEEECC--SSCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CcEEEEeecC--CceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEE
Confidence 3445555554 359999987 4579999999999999999999999999999999999989889999986 67889999
Q ss_pred EEecCCce
Q psy9257 424 VIRDRPLE 431 (530)
Q Consensus 424 tVrR~~~e 431 (530)
+|.|++++
T Consensus 87 ~v~r~~~~ 94 (391)
T 3tsz_A 87 LAQKKKDV 94 (391)
T ss_dssp EEEECHHH
T ss_pred EEeeCCcc
Confidence 99987544
No 234
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=5.1e-09 Score=91.71 Aligned_cols=78 Identities=23% Similarity=0.368 Sum_probs=66.5
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK--GGSV 499 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~t 499 (530)
+.++|+|.++.. .|||.+.+| . |..|.++++|+++| |+.||+|++|||+.|.+++.+++..+|++ .++.
T Consensus 19 ~~~~v~l~~~~~-glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~ 97 (123)
T 1ueq_A 19 TFLSTTLKKSNM-GFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQS 97 (123)
T ss_dssp EEEEEEEECCTT-SCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred cEEEEEEEeCCC-ceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 445666766644 499998743 3 88999999999999 99999999999999999998999999987 5799
Q ss_pred EEEEEEeCc
Q psy9257 500 LTLTLIPTS 508 (530)
Q Consensus 500 VtLtVip~~ 508 (530)
++|+|.|..
T Consensus 98 v~l~v~R~~ 106 (123)
T 1ueq_A 98 VNLVLCRGY 106 (123)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEeCC
Confidence 999998875
No 235
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.95 E-value=1.2e-09 Score=94.12 Aligned_cols=81 Identities=15% Similarity=0.223 Sum_probs=68.1
Q ss_pred eeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLI 505 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVi 505 (530)
.++++|.++....|||.+.. |. |..|.++|+|+++| |+.||+|++|||++|.++.+.++..+++..++.+.|+|.
T Consensus 3 ~~~v~L~k~~~~glG~~i~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~ 82 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 82 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEECSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEE
T ss_pred EEEEEEEeCCCCccCEEEEeCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 45677776666678998753 44 88999999999999 999999999999999998888888888888888999998
Q ss_pred eCcchh
Q psy9257 506 PTSMYQ 511 (530)
Q Consensus 506 p~~~~e 511 (530)
|.....
T Consensus 83 R~~~~~ 88 (106)
T 2la8_A 83 RPKPGS 88 (106)
T ss_dssp ECCSCS
T ss_pred eCCCCC
Confidence 865433
No 236
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.95 E-value=5.2e-09 Score=86.96 Aligned_cols=77 Identities=30% Similarity=0.520 Sum_probs=64.7
Q ss_pred eeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
++++.+.++ .+.|||.+.+ |. |..|.++++|+++||+.||+|++|||+++.++.+.++...+++.+
T Consensus 4 ~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 82 (97)
T 2w4f_A 4 ELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 82 (97)
T ss_dssp EEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCC
Confidence 455666666 4569999863 22 889999999999999999999999999999998877777777889
Q ss_pred CEEEEEEEeCc
Q psy9257 498 SVLTLTLIPTS 508 (530)
Q Consensus 498 ~tVtLtVip~~ 508 (530)
+.+.|+|.|..
T Consensus 83 ~~v~l~v~R~g 93 (97)
T 2w4f_A 83 TAVQMRVWRER 93 (97)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEeCC
Confidence 99999999875
No 237
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=1.7e-09 Score=91.69 Aligned_cols=77 Identities=29% Similarity=0.421 Sum_probs=65.6
Q ss_pred eeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--CCEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG--GSVL 500 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs--G~tV 500 (530)
.++++|.++.. .|||.+..| .|..|.++++|+++| |+.||+|++|||++|.+++.+++..+|+.. ++.+
T Consensus 10 ~~~v~l~~~~~-g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v 88 (103)
T 1uep_A 10 ELDVHLRRMES-GFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQV 88 (103)
T ss_dssp EECCEEESSSS-SCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEE
T ss_pred EEEEEEEeCCC-ccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcE
Confidence 45566777544 499998753 299999999999999 999999999999999999889999999876 7999
Q ss_pred EEEEEeCc
Q psy9257 501 TLTLIPTS 508 (530)
Q Consensus 501 tLtVip~~ 508 (530)
+|+|.|..
T Consensus 89 ~l~v~R~~ 96 (103)
T 1uep_A 89 NLTVRRKV 96 (103)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99998865
No 238
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.95 E-value=1.1e-09 Score=94.03 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=66.7
Q ss_pred ceeeEEeccCCCCccceeeccC---------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC---
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG---------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG--- 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G---------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs--- 496 (530)
+.+++.|.++....|||.+.++ .|..|.++++|+++| |+.||+|++|||+++.+++.+++..+|++.
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 3456777765556689998643 289999999999999 999999999999999999999999999865
Q ss_pred CCEEEEEEEeCcch
Q psy9257 497 GSVLTLTLIPTSMY 510 (530)
Q Consensus 497 G~tVtLtVip~~~~ 510 (530)
++.++|+|.|....
T Consensus 85 ~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 85 PGPIVLTVAKSGGG 98 (108)
T ss_dssp SSCEEEEEECCCC-
T ss_pred CCeEEEEEEeCCCC
Confidence 55799999886543
No 239
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.94 E-value=1.6e-09 Score=116.06 Aligned_cols=83 Identities=24% Similarity=0.326 Sum_probs=71.4
Q ss_pred cceEEEeccCCCeeEEEEEec-CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeEEEE
Q psy9257 347 IRELVLCKDASGLIGLRVCAI-NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNIRVV 424 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~-~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~VtLt 424 (530)
+|.|.+.|. +.|||.+.++ ..|++|..|.+||+|+++||+.||+|++|||+.+.+++.+++..+++.. .+..|+|+
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~ 79 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 79 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE
T ss_pred ceEEEEecC--CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 356677675 5699998765 4799999999999999999999999999999999999998899999874 67899999
Q ss_pred EecCCce
Q psy9257 425 IRDRPLE 431 (530)
Q Consensus 425 VrR~~~e 431 (530)
|.|+++.
T Consensus 80 V~r~g~~ 86 (468)
T 3shw_A 80 AQKKKDV 86 (468)
T ss_dssp EEECHHH
T ss_pred EEECCcc
Confidence 9987543
No 240
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=4.3e-09 Score=91.50 Aligned_cols=79 Identities=23% Similarity=0.417 Sum_probs=68.0
Q ss_pred ceeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
..++|+|.++. ..|||.+.. |. |..|.++++|+++| |+.||+|++|||++|.++.+.++..++++.
T Consensus 17 ~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 95 (120)
T 2eno_A 17 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 95 (120)
T ss_dssp EEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH
T ss_pred ceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44567777776 569999875 22 88999999999999 999999999999999999988999999887
Q ss_pred CCEEEEEEEeCcc
Q psy9257 497 GSVLTLTLIPTSM 509 (530)
Q Consensus 497 G~tVtLtVip~~~ 509 (530)
++.+.|+|.|...
T Consensus 96 g~~v~l~v~R~~~ 108 (120)
T 2eno_A 96 GYAVSLRVQHRLQ 108 (120)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCc
Confidence 8999999988653
No 241
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.94 E-value=2.2e-09 Score=92.88 Aligned_cols=80 Identities=25% Similarity=0.408 Sum_probs=69.2
Q ss_pred ceeeEEeccCCCCccceeecc---------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHH
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEA 492 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~i 492 (530)
..++++|.++....|||.+.+ |. |..|.++++|+++| |+.||+|++|||++|.+++..++..+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 94 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEA 94 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456788888876779999853 23 88999999999999 99999999999999999999999999
Q ss_pred HHhCCCEEEEEEEeCcc
Q psy9257 493 MEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 493 LkrsG~tVtLtVip~~~ 509 (530)
+++.++.+.|+|.+...
T Consensus 95 ~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 95 IKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHTSCSSEEEEECCBSC
T ss_pred HHcCCCeEEEEEEECCC
Confidence 99889999999976543
No 242
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.94 E-value=1.8e-09 Score=91.14 Aligned_cols=80 Identities=30% Similarity=0.463 Sum_probs=68.2
Q ss_pred ceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+.++|+|.++.. .|||.+.. |. |..|.++++|+++||+.||+|++|||+++.++..+++...++..++.+.|+
T Consensus 6 ~~r~v~l~k~~~-g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 84 (102)
T 2d90_A 6 SGRVVVIKKGSN-GYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL 84 (102)
T ss_dssp SSEEEEEECCSS-SSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEE
T ss_pred CCEEEEEeeCCC-CccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 457778887765 49999873 33 889999999999999999999999999999998888999998889999999
Q ss_pred EEeCcch
Q psy9257 504 LIPTSMY 510 (530)
Q Consensus 504 Vip~~~~ 510 (530)
|.+....
T Consensus 85 v~r~~~~ 91 (102)
T 2d90_A 85 VLDKEAE 91 (102)
T ss_dssp ECSTTCC
T ss_pred EEECCCc
Confidence 9876543
No 243
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.94 E-value=3.9e-09 Score=85.73 Aligned_cols=75 Identities=25% Similarity=0.387 Sum_probs=62.5
Q ss_pred eeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
++|+|.. ...|||.+.+| .|..|.++++|+++||+.||+|++|||+++.+++..++...++..++.+.|+|
T Consensus 3 ~~v~l~~--~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 80 (85)
T 1rgw_A 3 YSVTLTG--PGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTL 80 (85)
T ss_dssp EEEEECC--SSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEE
T ss_pred EEEEEeC--CCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEE
Confidence 4455532 24599998754 39999999999999999999999999999999988889888887778899999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.|..
T Consensus 81 ~R~~ 84 (85)
T 1rgw_A 81 QKSK 84 (85)
T ss_dssp ESCC
T ss_pred EeCC
Confidence 7753
No 244
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=92.10 Aligned_cols=83 Identities=27% Similarity=0.509 Sum_probs=69.3
Q ss_pred ceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+.++|+|.++ .+.|||.+.. |. |..|.++++|+++||+.||+|++|||+++.+++..++...+++.++.+.|+
T Consensus 8 ~~r~v~l~k~-~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~ 86 (106)
T 2eei_A 8 QPRLCYLVKE-GGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFL 86 (106)
T ss_dssp SSEEEEEECC-SSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEE
T ss_pred CCEEEEEEEC-CCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 4567778775 4558999842 33 889999999999999999999999999999998889998888878999999
Q ss_pred EEeCcchhhh
Q psy9257 504 LIPTSMYQHM 513 (530)
Q Consensus 504 Vip~~~~e~m 513 (530)
|.+....+.+
T Consensus 87 v~r~~~~~~~ 96 (106)
T 2eei_A 87 LVDKETDKRH 96 (106)
T ss_dssp ECCTTTSCCC
T ss_pred EEcCchhhHH
Confidence 9887655444
No 245
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=3.2e-09 Score=90.46 Aligned_cols=77 Identities=21% Similarity=0.366 Sum_probs=66.0
Q ss_pred eeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
.++|.|.+... .|||.+.+ |. |..|.++++|+++| |+.||+|++|||+++.++++.++..++++.
T Consensus 10 ~~~v~l~k~~~-glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 88 (107)
T 1wf8_A 10 LFPVELEKDED-GLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT 88 (107)
T ss_dssp EEEEEEECBTT-BSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC
T ss_pred EEEEEEEECCC-cccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 34566666544 49999876 22 88999999999999 999999999999999999999999999988
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.+.|+|.|..
T Consensus 89 ~~~v~l~v~R~~ 100 (107)
T 1wf8_A 89 KGNVRFVIGREK 100 (107)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 999999998764
No 246
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.93 E-value=3.8e-09 Score=87.13 Aligned_cols=76 Identities=24% Similarity=0.357 Sum_probs=64.1
Q ss_pred eeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
+++.+... ..|||.+.++ .|..|.++|+|+++||+.||+|++|||+++.++.+.++..+++..++.+.|+|
T Consensus 5 ~~v~~~~~--~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 82 (91)
T 2pkt_A 5 QQIDLQGP--GPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTV 82 (91)
T ss_dssp EEEEEESS--SCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEECCC--CCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 34444433 4589998754 38899999999999999999999999999999998899999988899999999
Q ss_pred EeCcc
Q psy9257 505 IPTSM 509 (530)
Q Consensus 505 ip~~~ 509 (530)
.|...
T Consensus 83 ~R~g~ 87 (91)
T 2pkt_A 83 ARSEH 87 (91)
T ss_dssp EEECC
T ss_pred EECCc
Confidence 88653
No 247
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.93 E-value=4.5e-09 Score=87.52 Aligned_cols=77 Identities=26% Similarity=0.455 Sum_probs=64.3
Q ss_pred ceeeEEeccCCCCccceeecc--Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEe
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK--GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIP 506 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~--Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip 506 (530)
..+++.|.++.. .|||.+.. |. |..|.++++|+++||+.||+|++|||+++.++.+.++...++ .++.++|+|.|
T Consensus 8 ~~r~v~l~~~~~-~~G~~l~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~v~R 85 (93)
T 2dls_A 8 VQRCVIIQKDQH-GFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALTLLG 85 (93)
T ss_dssp CEEEEEEECSSS-SCCEEEECSSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEEEEC
T ss_pred CCEEEEEEeCCC-ceeEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEEEEE
Confidence 456677777664 48999864 33 889999999999999999999999999999998777777665 68999999988
Q ss_pred Cc
Q psy9257 507 TS 508 (530)
Q Consensus 507 ~~ 508 (530)
..
T Consensus 86 ~~ 87 (93)
T 2dls_A 86 SS 87 (93)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 248
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.93 E-value=3.6e-09 Score=90.49 Aligned_cols=80 Identities=24% Similarity=0.417 Sum_probs=67.7
Q ss_pred ceeeEEeccCCCCccceeeccC----c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG----Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G----v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
..++|.|.++.. .|||.+.++ . |..|.++++|+++| |+.||+|++|||+.|.+++.+++..++++.++.+.|+
T Consensus 15 ~~~~v~l~~~~~-~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~ 93 (111)
T 2dlu_A 15 HVEEVELINDGS-GLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRML 93 (111)
T ss_dssp EEEEEEEECCSS-CCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEE
T ss_pred ceEEEEEEeCCC-ccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 445677776654 499998744 3 88999999999999 9999999999999999998899999998888999999
Q ss_pred EEeCcch
Q psy9257 504 LIPTSMY 510 (530)
Q Consensus 504 Vip~~~~ 510 (530)
|.|....
T Consensus 94 v~R~~~~ 100 (111)
T 2dlu_A 94 VARDPAG 100 (111)
T ss_dssp EEESCTT
T ss_pred EEeCCCC
Confidence 9887644
No 249
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.92 E-value=4.6e-09 Score=92.89 Aligned_cols=78 Identities=29% Similarity=0.384 Sum_probs=65.1
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--CCE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG--GSV 499 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs--G~t 499 (530)
+.++|+|.++.. .|||.+.++ .|..|.++++|+++| |+.||+|++|||++|.+++++++..+|+.. ++.
T Consensus 18 ~~~~v~l~~~~~-g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~ 96 (129)
T 2kpk_A 18 KFIHTKLRKSSR-GFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGAS 96 (129)
T ss_dssp EEEEEEEEECSS-CCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEE
T ss_pred cEEEEEEEECCC-cccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 344555555443 489988753 388999999999999 999999999999999999989999999876 788
Q ss_pred EEEEEEeCc
Q psy9257 500 LTLTLIPTS 508 (530)
Q Consensus 500 VtLtVip~~ 508 (530)
++|+|.|..
T Consensus 97 v~l~v~R~~ 105 (129)
T 2kpk_A 97 VDLELCRGY 105 (129)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEeCC
Confidence 999998875
No 250
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=2.7e-09 Score=92.89 Aligned_cols=81 Identities=16% Similarity=0.216 Sum_probs=70.3
Q ss_pred ceeeEEeccCCCCccceeeccC-------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
..+.+.|.++....|||.+..+ . |..|.++++|+++| |+.||+|++|||+.|.+++.+++..+|++.++.+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v 94 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKV 94 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEE
T ss_pred CcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4566778887766799998642 3 88999999999999 9999999999999999999999999999889999
Q ss_pred EEEEEeCcch
Q psy9257 501 TLTLIPTSMY 510 (530)
Q Consensus 501 tLtVip~~~~ 510 (530)
+|+|.|....
T Consensus 95 ~l~v~r~~~~ 104 (117)
T 1v62_A 95 RLEILPVPQS 104 (117)
T ss_dssp EEEECCBTTB
T ss_pred EEEEEECCCC
Confidence 9999887543
No 251
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=5.2e-09 Score=90.37 Aligned_cols=79 Identities=25% Similarity=0.426 Sum_probs=68.7
Q ss_pred ceeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcCC-CCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNGL-LVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAGL-r~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
..++|.|.+.....|||.+.. |. |..|.++++|+++|| +.||+|++|||+.|.+++.+++..+|+..++.++|+|
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 104 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVL 104 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEECSSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 446678888877679998863 33 889999999999998 9999999999999999998999999998888999999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.|..
T Consensus 105 ~r~~ 108 (113)
T 1va8_A 105 IPSS 108 (113)
T ss_dssp ECCC
T ss_pred EECC
Confidence 8765
No 252
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=3.1e-09 Score=92.95 Aligned_cols=80 Identities=23% Similarity=0.274 Sum_probs=69.3
Q ss_pred ceeeEEeccCCCCccceeeccC-----------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC-
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-----------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG- 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-----------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs- 496 (530)
+.++|+|.++....|||.+..+ .|..|.++++|+++| |+.||+|++|||+++.+++.+++..+|++.
T Consensus 15 ~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 94 (122)
T 1v5q_A 15 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 94 (122)
T ss_dssp EEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT
T ss_pred eeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5667888888767799999754 389999999999999 999999999999999998888999999854
Q ss_pred -CCEEEEEEEeCcc
Q psy9257 497 -GSVLTLTLIPTSM 509 (530)
Q Consensus 497 -G~tVtLtVip~~~ 509 (530)
++.++|+|.|...
T Consensus 95 ~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 95 ITSKVTLEIEFDVA 108 (122)
T ss_dssp TTTCEEEEEEEECC
T ss_pred CCCeEEEEEEECCc
Confidence 7899999988653
No 253
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.92 E-value=3e-09 Score=90.16 Aligned_cols=78 Identities=17% Similarity=0.270 Sum_probs=61.9
Q ss_pred CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceeeEEecc--C---CC
Q psy9257 368 NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERTVTLHR--D---SS 441 (530)
Q Consensus 368 ~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~tVtL~k--d---~~ 441 (530)
..|++|..|.++|||+. ||+.||+|++|||+.+.++.+ +..++.. ..++.+.|+|.|+++.+++++.. . ..
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~d--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~ 82 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQE--FIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGT 82 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHH--HHHHHHTSCTTCEEEEEEEETTEEEEEEEECEECSTTCC
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHH--HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEecCCCCCC
Confidence 57999999999999995 999999999999999998755 6666665 35789999999988877766542 1 22
Q ss_pred Cccceee
Q psy9257 442 GHFGFHF 448 (530)
Q Consensus 442 g~LGfs~ 448 (530)
..+|+..
T Consensus 83 ~~iGi~~ 89 (100)
T 3i18_A 83 PGIGITL 89 (100)
T ss_dssp EECSEEE
T ss_pred cEEeEEE
Confidence 3467665
No 254
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=5.6e-09 Score=88.17 Aligned_cols=78 Identities=31% Similarity=0.477 Sum_probs=66.4
Q ss_pred ceeeEEeccCCCCccceeeccC---------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG---------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSV 499 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G---------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~t 499 (530)
+.++++|.+... .|||.+..+ .|..|.++++|+++| |+.||+|++|||+.|.++...++..++++.++.
T Consensus 11 ~~~~v~l~~~~~-g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 89 (104)
T 2djt_A 11 GHFSVELVRGYA-GFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQ 89 (104)
T ss_dssp CCEEEEEECCSS-SCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSE
T ss_pred ceEEEEEEeCCC-CccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 456677777664 499998752 288999999999999 999999999999999999888888888888899
Q ss_pred EEEEEEeCc
Q psy9257 500 LTLTLIPTS 508 (530)
Q Consensus 500 VtLtVip~~ 508 (530)
+.|+|.|..
T Consensus 90 v~l~v~R~g 98 (104)
T 2djt_A 90 LHLVIRRPL 98 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEECC
Confidence 999998764
No 255
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=8.2e-09 Score=88.14 Aligned_cols=78 Identities=31% Similarity=0.512 Sum_probs=66.2
Q ss_pred ceeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
+.+++.+.++ .+.|||.+.+ |. |..|.++++|+++||+.||+|++|||+.+.++.+.++...+++.
T Consensus 15 ~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 15 EELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp EEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred ceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 4556667776 4559999862 23 88999999999999999999999999999999888888888888
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.+.|+|.|..
T Consensus 94 g~~v~l~v~R~g 105 (110)
T 1x5q_A 94 GTAVQMRVWRES 105 (110)
T ss_dssp CSEEEEEEEECS
T ss_pred CCeEEEEEEECC
Confidence 999999999875
No 256
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=1e-09 Score=94.08 Aligned_cols=79 Identities=24% Similarity=0.382 Sum_probs=69.1
Q ss_pred ceeeEEeccCCCCccceeeccC----------------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHH
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG----------------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEA 492 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G----------------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~i 492 (530)
..++|+|.++..+.|||.+.++ .|..|.++++|+++| |+.||+|++|||++|.+++.+++..+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4566778887767799998754 288999999999999 99999999999999999999999999
Q ss_pred HHhCCCEEEEEEEeCc
Q psy9257 493 MEKGGSVLTLTLIPTS 508 (530)
Q Consensus 493 LkrsG~tVtLtVip~~ 508 (530)
++..++.+.|+|.|..
T Consensus 89 l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HSSCSSEEEECCCCCC
T ss_pred HHcCCCeEEEEEEECC
Confidence 9988999999998764
No 257
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.91 E-value=5.7e-09 Score=92.88 Aligned_cols=75 Identities=23% Similarity=0.271 Sum_probs=64.1
Q ss_pred EEeccCCCCccceeecc---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--CCEE
Q psy9257 434 VTLHRDSSGHFGFHFNK---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG--GSVL 500 (530)
Q Consensus 434 VtL~kd~~g~LGfs~~~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs--G~tV 500 (530)
+++.++....|||.+.+ |. |..|.++++|+++| |+.||+|++|||+.+.+++++++..+|+.. ++.+
T Consensus 40 ~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v 119 (131)
T 1wfg_A 40 GSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQV 119 (131)
T ss_dssp SCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEE
T ss_pred EEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 34555667779999964 22 88999999999999 999999999999999999999999999865 4899
Q ss_pred EEEEEeCc
Q psy9257 501 TLTLIPTS 508 (530)
Q Consensus 501 tLtVip~~ 508 (530)
+|+|.|..
T Consensus 120 ~l~v~R~g 127 (131)
T 1wfg_A 120 ELVVSRSG 127 (131)
T ss_dssp EEEEEEEC
T ss_pred EEEEEcCC
Confidence 99998753
No 258
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.91 E-value=9.3e-09 Score=89.45 Aligned_cols=81 Identities=22% Similarity=0.351 Sum_probs=69.2
Q ss_pred CceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
...++|+|.++..+.|||.+.++ . |..|.++|+|+++| |+.||+|++|||+++.+.+.+++..+++..++.+
T Consensus 23 ~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v 102 (114)
T 2gzv_A 23 MVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 102 (114)
T ss_dssp CCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35677888888888899999743 2 88999999999999 9999999999999998888889999998888889
Q ss_pred EEEEEeCcc
Q psy9257 501 TLTLIPTSM 509 (530)
Q Consensus 501 tLtVip~~~ 509 (530)
.|+|.+...
T Consensus 103 ~l~v~~~~~ 111 (114)
T 2gzv_A 103 TIHYNKLQY 111 (114)
T ss_dssp EEEEECCCC
T ss_pred EEEEEeccc
Confidence 998866543
No 259
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.91 E-value=5.3e-09 Score=97.67 Aligned_cols=78 Identities=21% Similarity=0.319 Sum_probs=66.6
Q ss_pred EEEeccCCCeeEEEEEecCCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecC
Q psy9257 350 LVLCKDASGLIGLRVCAINEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDR 428 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~ 428 (530)
+.+.+.....|||.+.....|++|..|.++|+|+++| |+.||+|++|||+.|.++++.++..+++.. +..+.|+|.|.
T Consensus 117 v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~V~R~ 195 (206)
T 3r0h_A 117 VDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA-NGKVSMEVTRP 195 (206)
T ss_dssp EEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEE
T ss_pred EEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 3444444556999998777899999999999999999 999999999999999999888888888764 57899998873
No 260
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=3.5e-09 Score=89.87 Aligned_cols=78 Identities=22% Similarity=0.417 Sum_probs=66.6
Q ss_pred ceeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
+.++++|.++..+ |||.+.+ |. |..|.++++|+++| |+.||+|++|||+.+.+++.+++..++++
T Consensus 7 ~~~~v~l~~~~~g-lG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 7 GRHVACLARSERG-LGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp EEEEEEECCCTTC-CSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred eeEEEEEEeCCCc-cCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3456666666555 9999873 33 88999999999999 99999999999999999988999999998
Q ss_pred CCCEEEEEEEeCc
Q psy9257 496 GGSVLTLTLIPTS 508 (530)
Q Consensus 496 sG~tVtLtVip~~ 508 (530)
.++.+.|+|.|..
T Consensus 86 ~g~~v~l~v~R~~ 98 (105)
T 1wha_A 86 ASPTIALLLEREA 98 (105)
T ss_dssp CCSCEEEEEEECC
T ss_pred CCCeEEEEEEECC
Confidence 8899999998865
No 261
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=6.3e-09 Score=87.58 Aligned_cols=79 Identities=24% Similarity=0.384 Sum_probs=67.3
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
..++++|.+...+.|||.+..+ . |..|.++++|+++||+.||+|++|||+++.++..+++...++. ++.+.|
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l 88 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLHM 88 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEEE
T ss_pred eEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEEE
Confidence 4566778887777899998643 3 8899999999999999999999999999999987778887776 789999
Q ss_pred EEEeCcc
Q psy9257 503 TLIPTSM 509 (530)
Q Consensus 503 tVip~~~ 509 (530)
+|.|...
T Consensus 89 ~v~R~g~ 95 (100)
T 2eeh_A 89 MVRRMGS 95 (100)
T ss_dssp EEEECSC
T ss_pred EEEECCc
Confidence 9988753
No 262
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.90 E-value=5.6e-09 Score=87.58 Aligned_cols=79 Identities=15% Similarity=0.240 Sum_probs=66.5
Q ss_pred ceeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
+.++++|.+.....|||.+.. |. |..|.++|+|+++| |+.||+|++|||+.+.++.+.++..++++.++.+.|+|
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v 87 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEV 87 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEECSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred ceEEEEEEeCCCCCccEEEEeCCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 445667766555668988752 43 89999999999999 99999999999999999888888889998888999999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.|..
T Consensus 88 ~R~~ 91 (96)
T 2qkv_A 88 TRPK 91 (96)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 8753
No 263
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.90 E-value=8.5e-09 Score=87.49 Aligned_cols=77 Identities=31% Similarity=0.458 Sum_probs=65.1
Q ss_pred ceeeEEeccCCCCccceeecc---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGS 498 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~ 498 (530)
+.++++| +. ...|||.+.+ |. |..|.++|+|+++| |+.||+|++|||+++.+++..++...+++.++
T Consensus 11 ~~~~v~l-~~-~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 88 (106)
T 3axa_A 11 EIITVTL-KK-QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSS 88 (106)
T ss_dssp CEEEEEE-EC-SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred eEEEEEE-CC-CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4455666 33 3458999863 22 88999999999999 99999999999999999999999999998999
Q ss_pred EEEEEEEeCc
Q psy9257 499 VLTLTLIPTS 508 (530)
Q Consensus 499 tVtLtVip~~ 508 (530)
.+.|+|.|..
T Consensus 89 ~v~l~v~R~~ 98 (106)
T 3axa_A 89 VVTLEVAKQG 98 (106)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 9999998865
No 264
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=6.6e-09 Score=87.42 Aligned_cols=78 Identities=28% Similarity=0.461 Sum_probs=64.5
Q ss_pred eeeEEeccCCCCccceeecc---------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHH
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK---------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAM 493 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~---------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iL 493 (530)
.+++.+.+.....|||.+.+ |. |..|.++|+|+++| |+.||+|++|||+++.+++.+++..++
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 84 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35566666666668887742 33 88999999999999 999999999999999998889999999
Q ss_pred HhCCCEEEEEEEeCc
Q psy9257 494 EKGGSVLTLTLIPTS 508 (530)
Q Consensus 494 krsG~tVtLtVip~~ 508 (530)
+..++.+.|+|.|..
T Consensus 85 ~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 85 RKAGNPVVFMVQSII 99 (103)
T ss_dssp HTCCSSEEEEEECCC
T ss_pred HhCCCcEEEEEEECC
Confidence 987789999998764
No 265
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.90 E-value=6.6e-09 Score=88.30 Aligned_cols=79 Identities=28% Similarity=0.454 Sum_probs=66.0
Q ss_pred ceeeEEec-cCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 430 LERTVTLH-RDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 430 ~e~tVtL~-kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
+.++++|. +.....|||.+.. |. |..|.++++|+++| |+.||+|++|||++|.+++.+++..+++.
T Consensus 12 ~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2jre_A 12 SLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN 91 (108)
T ss_dssp EEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34556664 3445569999864 33 88999999999999 99999999999999999988889988888
Q ss_pred CCCEEEEEEEeCc
Q psy9257 496 GGSVLTLTLIPTS 508 (530)
Q Consensus 496 sG~tVtLtVip~~ 508 (530)
.++.+.|+|.|..
T Consensus 92 ~g~~v~l~v~R~~ 104 (108)
T 2jre_A 92 AGNPVRLLLIRRL 104 (108)
T ss_dssp HCSEEEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 8899999998765
No 266
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.90 E-value=5.6e-09 Score=90.92 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=62.3
Q ss_pred eeEEeccCCCCccceeeccC--c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCC-EEEEEEEeC
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG--Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGS-VLTLTLIPT 507 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G--v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~-tVtLtVip~ 507 (530)
++|.|.++. +.+||.+.+. . |..|.++++|+++||+.||+|++|||+++.+++.+++..+++..++ .++|+|.+.
T Consensus 25 r~v~l~k~~-~~~G~~l~~~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 25 RSIRFTAEE-GDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp EEEEECCGG-GCCCEEEESSSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESC
T ss_pred EEEEEEeCC-CceeEEEeCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 455566643 4589887643 3 8899999999999999999999999999999988899999987665 499999876
Q ss_pred c
Q psy9257 508 S 508 (530)
Q Consensus 508 ~ 508 (530)
.
T Consensus 104 ~ 104 (109)
T 2vsv_A 104 L 104 (109)
T ss_dssp C
T ss_pred C
Confidence 4
No 267
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.42 E-value=1.6e-10 Score=100.62 Aligned_cols=81 Identities=26% Similarity=0.442 Sum_probs=65.5
Q ss_pred cccceEEEeccCCCeeEEEEEec---CCcEEEEEeccCCHhhh-cCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCe
Q psy9257 345 NGIRELVLCKDASGLIGLRVCAI---NEGVFVCLVERGSPASL-VGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNN 420 (530)
Q Consensus 345 ~~Vr~V~L~K~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAak-AGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~ 420 (530)
..++.+.+.+....+|||++..+ ..|++|..|.++|+|++ +||+.||+|++|||+.+.+.+..++..+++.. +..
T Consensus 26 ~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~ 104 (112)
T 2lob_A 26 QGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGE 104 (112)
Confidence 34567777777777899999864 25799999999999999 89999999999999999887777788888654 344
Q ss_pred EEEEEe
Q psy9257 421 IRVVIR 426 (530)
Q Consensus 421 VtLtVr 426 (530)
+.|+|+
T Consensus 105 v~l~V~ 110 (112)
T 2lob_A 105 IEFEVV 110 (112)
Confidence 777654
No 268
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.89 E-value=5.6e-10 Score=108.19 Aligned_cols=89 Identities=24% Similarity=0.305 Sum_probs=71.5
Q ss_pred cceEEEeccCCCeeEEEEEecC--CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeE-EE
Q psy9257 347 IRELVLCKDASGLIGLRVCAIN--EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNI-RV 423 (530)
Q Consensus 347 Vr~V~L~K~s~G~LG~~V~~~~--~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~V-tL 423 (530)
.+.|.+.+.. ++|||.+.... .|++|..|.+|++|+++||+.||+|++|||+.|.+++..++..+++.. +..| .|
T Consensus 10 ~r~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l 87 (216)
T 2krg_A 10 PRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLL 87 (216)
T ss_dssp CEEEEEECCS-SSSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEE
T ss_pred eEEEEEEeCC-CCceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEE
Confidence 3456666654 45999998654 389999999999999999999999999999999977777788888765 7788 88
Q ss_pred EEecCCcee--eEEec
Q psy9257 424 VIRDRPLER--TVTLH 437 (530)
Q Consensus 424 tVrR~~~e~--tVtL~ 437 (530)
+|.|+++.+ ++.+.
T Consensus 88 ~V~R~g~~~~~~v~v~ 103 (216)
T 2krg_A 88 VVDRETDEFFKKCRVI 103 (216)
T ss_dssp ECCHHHHHHHHHHTCC
T ss_pred EEEECCEEEEEEEEEE
Confidence 888876655 44443
No 269
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.89 E-value=6.3e-09 Score=86.49 Aligned_cols=74 Identities=16% Similarity=0.363 Sum_probs=62.7
Q ss_pred eeeEEeccCCCCccceeeccC--------------c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG--------------Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G--------------v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
+++|++.++. .|||.+.+| . |..|.++++|++ ||+.||+|++|||+++.++++.++...+++
T Consensus 4 ~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 4 EIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEEECSS--SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEEECCCC--CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 3455555554 589998742 2 889999999999 999999999999999999988889888888
Q ss_pred CCCEEEEEEEeC
Q psy9257 496 GGSVLTLTLIPT 507 (530)
Q Consensus 496 sG~tVtLtVip~ 507 (530)
.++.+.|+|.|.
T Consensus 81 ~~~~v~l~v~R~ 92 (95)
T 1mfg_A 81 FQNTVELIIVRE 92 (95)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCeEEEEEEeC
Confidence 899999999875
No 270
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.89 E-value=3.1e-09 Score=89.88 Aligned_cols=78 Identities=22% Similarity=0.357 Sum_probs=64.9
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
++++|+|.. ...|||.+.+| .|..|.++++|+++||+.||+|++|||+++.++.+.++...+++.++.+.|
T Consensus 5 ~~~~v~l~~--~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 82 (103)
T 1wf7_A 5 SSGSVSLVG--PAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM 82 (103)
T ss_dssp CCEEEEEES--SSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEE
T ss_pred CEEEEEEeC--CCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 445556652 24589998754 277889999999999999999999999999999888888888888999999
Q ss_pred EEEeCcc
Q psy9257 503 TLIPTSM 509 (530)
Q Consensus 503 tVip~~~ 509 (530)
+|.|...
T Consensus 83 ~v~R~g~ 89 (103)
T 1wf7_A 83 TLQRASA 89 (103)
T ss_dssp EECCCSC
T ss_pred EEEeCCC
Confidence 9988754
No 271
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.89 E-value=3.5e-09 Score=91.30 Aligned_cols=83 Identities=25% Similarity=0.468 Sum_probs=69.4
Q ss_pred eeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
.+++.+.++....|||.+.. |. |..|.++|+|+++||+.||+|++|||+++.++..+++...+++.|+.+.|+|
T Consensus 14 p~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 93 (114)
T 2edz_A 14 PRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLV 93 (114)
T ss_dssp CEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEE
T ss_pred CEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEE
Confidence 45666767666778887752 33 8899999999999999999999999999999888899999988899999999
Q ss_pred EeCcchhhh
Q psy9257 505 IPTSMYQHM 513 (530)
Q Consensus 505 ip~~~~e~m 513 (530)
.|......+
T Consensus 94 ~R~~~~~~~ 102 (114)
T 2edz_A 94 LDGDSYEKA 102 (114)
T ss_dssp ECHHHHHHH
T ss_pred EECCcceeh
Confidence 987655443
No 272
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.89 E-value=7.8e-09 Score=90.53 Aligned_cols=77 Identities=18% Similarity=0.359 Sum_probs=64.7
Q ss_pred eeEEeccCCCCccceeeccC-------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
++|.|.++. ..|||.+.++ . |..|.++++|+++| |+.||+|++|||++|.++++.++...+++.++.+.|
T Consensus 27 ~~v~l~k~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l 105 (124)
T 2daz_A 27 HIIELEKDK-NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKL 105 (124)
T ss_dssp EEEEEECCS-SCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEE
T ss_pred EEEEEEeCC-CccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 445555553 3488888643 2 88999999999999 999999999999999999999999999888889999
Q ss_pred EEEeCcc
Q psy9257 503 TLIPTSM 509 (530)
Q Consensus 503 tVip~~~ 509 (530)
+|.|...
T Consensus 106 ~v~R~~~ 112 (124)
T 2daz_A 106 VFIRNED 112 (124)
T ss_dssp EEEECTT
T ss_pred EEEeCCC
Confidence 9988753
No 273
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.89 E-value=5.6e-09 Score=90.71 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=60.4
Q ss_pred CCccceeeccC-----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeC
Q psy9257 441 SGHFGFHFNKG-----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPT 507 (530)
Q Consensus 441 ~g~LGfs~~~G-----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~ 507 (530)
...|||.+.++ . |..|.++++|+++| |+.||+|++|||+++.+++++++..+|+..++.++|+|.|.
T Consensus 29 ~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 108 (117)
T 1ujd_A 29 GNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLD 108 (117)
T ss_dssp CCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESS
T ss_pred CCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEEC
Confidence 45699998632 2 88999999999999 99999999999999999999999999998899999999876
Q ss_pred c
Q psy9257 508 S 508 (530)
Q Consensus 508 ~ 508 (530)
.
T Consensus 109 ~ 109 (117)
T 1ujd_A 109 L 109 (117)
T ss_dssp C
T ss_pred C
Confidence 4
No 274
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.88 E-value=4.1e-09 Score=89.30 Aligned_cols=76 Identities=24% Similarity=0.451 Sum_probs=64.6
Q ss_pred CceeeEEeccCCCCccceeecc-------------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK-------------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME 494 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~-------------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk 494 (530)
...+++.|.+...+.|||.+.. +. |..|.++++|+++||+.||+|++|||+++.+++.+++..+|+
T Consensus 14 ~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 14 SQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp SCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred CcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 3456677777766778999874 32 889999999999999999999999999999998899999999
Q ss_pred hCCCEEEEEE
Q psy9257 495 KGGSVLTLTL 504 (530)
Q Consensus 495 rsG~tVtLtV 504 (530)
+.++.++|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 8777888775
No 275
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.88 E-value=8.8e-09 Score=88.13 Aligned_cols=78 Identities=26% Similarity=0.290 Sum_probs=65.8
Q ss_pred ceeeEEeccCCCCccceeeccC----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC-
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG- 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs- 496 (530)
..++|.|.++. ..|||.+.+| . |..|.++++|+++| |+.||+|++|||++|.+++.+++..+|+..
T Consensus 15 ~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (108)
T 2d92_A 15 EVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVP 93 (108)
T ss_dssp SCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSC
T ss_pred ceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 44667777775 4599998642 2 88999999999999 999999999999999999999999999874
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.++|+|.|..
T Consensus 94 ~~~v~l~v~R~~ 105 (108)
T 2d92_A 94 PGLVHLGICSGP 105 (108)
T ss_dssp SEEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 678999998754
No 276
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.88 E-value=9.4e-09 Score=94.30 Aligned_cols=83 Identities=20% Similarity=0.326 Sum_probs=67.5
Q ss_pred eEEEeccCCCeeEEEEEec--------CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCC
Q psy9257 349 ELVLCKDASGLIGLRVCAI--------NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVN 419 (530)
Q Consensus 349 ~V~L~K~s~G~LG~~V~~~--------~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~ 419 (530)
.+.+.+... .|||.+... ..|++|..|.++|+|+++| |+.||+|++|||+.|.+++.+++..+++. .+.
T Consensus 103 ~v~l~~~~~-~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~ 180 (196)
T 3gsl_A 103 EIKLIKGPK-GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN-TYD 180 (196)
T ss_dssp EEEEEEBTT-BSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS-CCE
T ss_pred EEEEecCCC-CceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc-CCC
Confidence 344444433 689998763 2589999999999999999 99999999999999999888888999976 478
Q ss_pred eEEEEEecCCceee
Q psy9257 420 NIRVVIRDRPLERT 433 (530)
Q Consensus 420 ~VtLtVrR~~~e~t 433 (530)
.+.|+|.|++....
T Consensus 181 ~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 181 VVYLKVAKPSNAET 194 (196)
T ss_dssp EEEEEEEEESCCCE
T ss_pred eEEEEEeCCCCccc
Confidence 89999988765543
No 277
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.88 E-value=4.5e-09 Score=86.78 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=58.0
Q ss_pred eEEEEEecC---CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeEEEEEecCCceeeEE
Q psy9257 360 IGLRVCAIN---EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNIRVVIRDRPLERTVT 435 (530)
Q Consensus 360 LG~~V~~~~---~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~VtLtVrR~~~e~tVt 435 (530)
+|+.....+ .|+.|..+.++|+|+++||+.||+|++|||+.+.+|.+ +..++... .++.+.|+|.|+++.+++.
T Consensus 7 ~~~~p~~~~g~~~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d--~~~~~~~~~~g~~v~l~v~R~g~~~~~~ 84 (87)
T 2i6v_A 7 VRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNV--MNTLFQSMNEMTEMSLTVERDGQQHDVY 84 (87)
T ss_dssp EEEEEEEETTEEEEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHH--HHHHHHTGGGCSEEEEEEEETTEEEEEE
T ss_pred cceEEEeeCCeEEEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 455444322 36778888888899999999999999999999998765 55666543 5788999999988777665
Q ss_pred e
Q psy9257 436 L 436 (530)
Q Consensus 436 L 436 (530)
+
T Consensus 85 v 85 (87)
T 2i6v_A 85 I 85 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 278
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.88 E-value=8.1e-09 Score=91.17 Aligned_cols=80 Identities=31% Similarity=0.437 Sum_probs=68.4
Q ss_pred CceeeEEeccCC-CCccceeecc---------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHH
Q psy9257 429 PLERTVTLHRDS-SGHFGFHFNK---------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELL 490 (530)
Q Consensus 429 ~~e~tVtL~kd~-~g~LGfs~~~---------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv 490 (530)
...+.|.|.+.. .+.|||.+.+ |. |..|.++|+|+++| |+.||+|++|||++|.+++.+++.
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345677787774 4669999862 33 88999999999999 899999999999999999999999
Q ss_pred HHHHhCCCEEEEEEEeCc
Q psy9257 491 EAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 491 ~iLkrsG~tVtLtVip~~ 508 (530)
.++++.++.++|+|.|..
T Consensus 108 ~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 108 DMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHTTTSEEEEEECCC
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 999988888999998865
No 279
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.87 E-value=6.5e-09 Score=88.96 Aligned_cols=72 Identities=18% Similarity=0.382 Sum_probs=61.5
Q ss_pred cCCCCccceeeccC-----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 438 RDSSGHFGFHFNKG-----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 438 kd~~g~LGfs~~~G-----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
++....|||.+.+| . |..|.++++|+++| |+.||+|++|||++|.+++..++...+++.++.++|+|
T Consensus 9 ~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v 88 (106)
T 4amh_A 9 PRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKV 88 (106)
T ss_dssp ---CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEE
T ss_pred CCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence 34455688888743 2 88999999999999 99999999999999999999999999998899999999
Q ss_pred EeCcc
Q psy9257 505 IPTSM 509 (530)
Q Consensus 505 ip~~~ 509 (530)
.|...
T Consensus 89 ~R~~~ 93 (106)
T 4amh_A 89 AKPGS 93 (106)
T ss_dssp ECCSS
T ss_pred EeCCC
Confidence 98753
No 280
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=5.5e-09 Score=88.23 Aligned_cols=78 Identities=23% Similarity=0.271 Sum_probs=64.5
Q ss_pred ceeeEEeccCCCCccceeecc--C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEe
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK--G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIP 506 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~--G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip 506 (530)
+.+.+++.+... .|||.+.. + .|..|.++++|+++||+.||+|++|||+++.+++..++..+++..++.+.|+|.|
T Consensus 15 ~~~~v~l~~~~~-g~G~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 93 (100)
T 1whd_A 15 EKLQITIRRGKD-GFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWR 93 (100)
T ss_dssp EEEEEEEECCSS-SSSCBCCCSSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEE
T ss_pred ceEEEEEECCCC-eeeEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 345566666553 48888753 3 3889999999999999999999999999999998889999999888889999987
Q ss_pred Cc
Q psy9257 507 TS 508 (530)
Q Consensus 507 ~~ 508 (530)
..
T Consensus 94 ~~ 95 (100)
T 1whd_A 94 VS 95 (100)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 281
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=6.4e-09 Score=86.59 Aligned_cols=76 Identities=24% Similarity=0.269 Sum_probs=63.1
Q ss_pred eeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+++|+|.+. ..|||.+.+| .|..|.++++|+++||+.||+|++|||+++.+++..++...++..++.+.|+
T Consensus 9 ~~~v~l~~~--~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 86 (94)
T 2eeg_A 9 PHSVTLRGP--SPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLS 86 (94)
T ss_dssp CEEEEECCS--SCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEE
T ss_pred eEEEEEeCC--CccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 345555333 4589998753 2888999999999999999999999999999998888888888888899999
Q ss_pred EEeCc
Q psy9257 504 LIPTS 508 (530)
Q Consensus 504 Vip~~ 508 (530)
|.|..
T Consensus 87 v~R~g 91 (94)
T 2eeg_A 87 VSSGP 91 (94)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 98764
No 282
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=4.7e-09 Score=90.92 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=68.0
Q ss_pred ceeeEEeccCCCCccceeeccC------------c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------------Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------------v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
+.++++|.++....|||.+.+| . |..|.++++|+ +||+.||+|++|||++|.++++.++..++++.
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 3456778877767799998753 2 88999999997 89999999999999999999999999999988
Q ss_pred CCEEEEEEEeCcc
Q psy9257 497 GSVLTLTLIPTSM 509 (530)
Q Consensus 497 G~tVtLtVip~~~ 509 (530)
++.+.|+|.|...
T Consensus 93 ~~~v~l~v~R~~~ 105 (117)
T 2csj_A 93 GKIAAIVVKRPRK 105 (117)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEECCc
Confidence 9999999988653
No 283
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.87 E-value=4.5e-09 Score=90.17 Aligned_cols=79 Identities=20% Similarity=0.311 Sum_probs=67.0
Q ss_pred eeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
.++|+|.+.. ..|||.+.+ |. |..|.++|+|+++| |+.||+|++|||+++.+++..++..++++.
T Consensus 5 ~~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (113)
T 2g5m_B 5 LFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 83 (113)
T ss_dssp EEEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS
T ss_pred EEEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4566676655 458998876 22 88999999999999 999999999999999999989999999988
Q ss_pred CCEEEEEEEeCcch
Q psy9257 497 GSVLTLTLIPTSMY 510 (530)
Q Consensus 497 G~tVtLtVip~~~~ 510 (530)
++.+.|+|.|....
T Consensus 84 g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 84 KGRVRFMIGRERPG 97 (113)
T ss_dssp CSSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCCC
Confidence 99999999987643
No 284
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.86 E-value=8.1e-09 Score=96.45 Aligned_cols=75 Identities=21% Similarity=0.370 Sum_probs=64.1
Q ss_pred eeEEeccCCCCccceeecc------------C-cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCC
Q psy9257 432 RTVTLHRDSSGHFGFHFNK------------G-QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGG 497 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~------------G-vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG 497 (530)
++|+|.++.. .|||.+.+ | .|..|.++++|+++| |+.||+|++|||+.|.++++.++..+|+..+
T Consensus 82 ~~v~l~k~~~-glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g 160 (170)
T 3egg_C 82 FPVELEKDSE-GLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 160 (170)
T ss_dssp EEEEEECBTT-BSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCC
T ss_pred EEEEEEeCCC-eEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4455555554 48888866 1 288999999999999 9999999999999999999999999999999
Q ss_pred CEEEEEEEeC
Q psy9257 498 SVLTLTLIPT 507 (530)
Q Consensus 498 ~tVtLtVip~ 507 (530)
..|+|+|.|.
T Consensus 161 ~~v~L~V~R~ 170 (170)
T 3egg_C 161 GRVRFMIGRE 170 (170)
T ss_dssp SEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 9999999874
No 285
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.86 E-value=1.6e-08 Score=86.35 Aligned_cols=78 Identities=17% Similarity=0.400 Sum_probs=64.3
Q ss_pred ceeeEEeccCCCCccceeecc---------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG-- 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs-- 496 (530)
+.+++.+.+... .|||.+.. |. |..|.++++|+++| |+.||+|++|||+.+.+++.+++..+++..
T Consensus 11 ~~~~~~l~~~~~-glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 11 KRLNIQLKKGTE-GLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp EEEEEEEECBTT-BTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred cEEEEEEEECCC-ccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 445556655543 48888862 23 88999999999999 999999999999999999888999999864
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.+.|+|.|..
T Consensus 90 g~~v~l~v~R~~ 101 (111)
T 2koj_A 90 EGTVSLLVFRQE 101 (111)
T ss_dssp SSEEEEEEEECC
T ss_pred CCeEEEEEEeCC
Confidence 889999998865
No 286
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.86 E-value=7.5e-09 Score=87.82 Aligned_cols=79 Identities=24% Similarity=0.315 Sum_probs=66.4
Q ss_pred ceeeEEeccCCCCccceeecc------------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK------------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~------------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
+.++|+|.++....|||.+.+ |. |..|.++++|+ +||+.||+|++|||+++.++.+.+....+++.
T Consensus 7 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (107)
T 2h2b_A 7 EQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKS 85 (107)
T ss_dssp EEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCC
Confidence 356777888776779999862 33 88999999999 99999999999999999999877777777778
Q ss_pred CCEEEEEEEeCcc
Q psy9257 497 GSVLTLTLIPTSM 509 (530)
Q Consensus 497 G~tVtLtVip~~~ 509 (530)
++.+.|+|.|...
T Consensus 86 g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 86 GKNAKITIRRKKG 98 (107)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCEEEEEEEECCC
Confidence 9999999987653
No 287
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.86 E-value=1.3e-08 Score=87.98 Aligned_cols=78 Identities=26% Similarity=0.423 Sum_probs=66.9
Q ss_pred ceeeEEeccCCCCccceeeccC-----c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-----Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-----v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
+.++|+|.+...+ |||.+..+ . |..|.++++|+++| |+.||+|++|||+.+.++.+.++...+++.++.+.|
T Consensus 14 ~~~~v~l~k~~~g-lG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 92 (119)
T 1tp5_A 14 EPRRIVIHRGSTG-LGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI 92 (119)
T ss_dssp SCEEEEEECTTSC-CCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEE
T ss_pred ccEEEEEEECCCC-ccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4567777776655 99998743 3 88999999999999 999999999999999999888888888888999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.+..
T Consensus 93 ~v~r~~ 98 (119)
T 1tp5_A 93 IAQYKP 98 (119)
T ss_dssp EEEECH
T ss_pred EEEECC
Confidence 998764
No 288
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.85 E-value=1e-08 Score=112.47 Aligned_cols=80 Identities=24% Similarity=0.238 Sum_probs=67.8
Q ss_pred CCeeEEEEEecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceeeEE
Q psy9257 357 SGLIGLRVCAINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERTVT 435 (530)
Q Consensus 357 ~G~LG~~V~~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~tVt 435 (530)
..+||+++...+.|++|..|.+||||++|||+.||+|++|||+.|. ..+ +..+++. ..|+.|.|+|.|+++.++++
T Consensus 484 ~~~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~-~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 560 (597)
T 4fgm_A 484 RVNFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQAT-EQS--VKRILERYIPGDTVTIHAFRRDELMTLE 560 (597)
T ss_dssp SCCCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC-TTT--HHHHHTTCCTTCEEEEEEEETTEEEEEE
T ss_pred ccccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECC-HHH--HHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 4579999987778999999999999999999999999999999994 433 5666654 56899999999999888777
Q ss_pred eccC
Q psy9257 436 LHRD 439 (530)
Q Consensus 436 L~kd 439 (530)
+...
T Consensus 561 v~l~ 564 (597)
T 4fgm_A 561 LTWQ 564 (597)
T ss_dssp EECC
T ss_pred EEec
Confidence 7554
No 289
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=6.9e-09 Score=88.52 Aligned_cols=78 Identities=24% Similarity=0.389 Sum_probs=66.9
Q ss_pred ceeeEEeccCCCCccceeeccC-----c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-----Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-----v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
+.+.|+|.+.. ..|||.+..+ . |..|.++++|+++| |+.||+|++|||+++.++.+.++..++++.++.+.|
T Consensus 15 ~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l 93 (113)
T 1um7_A 15 EPRKIILHKGS-TGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTI 93 (113)
T ss_dssp SEEEEEEECCS-SCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEE
T ss_pred ceEEEEEEECC-CcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 55677777765 4499998643 2 88999999999999 999999999999999999888888888888999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.+..
T Consensus 94 ~v~r~~ 99 (113)
T 1um7_A 94 VAQYRP 99 (113)
T ss_dssp EEECCH
T ss_pred EEEECc
Confidence 998764
No 290
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.85 E-value=1e-08 Score=88.39 Aligned_cols=79 Identities=16% Similarity=0.351 Sum_probs=66.4
Q ss_pred CceeeEEeccCCCCccceeeccC--------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNKG--------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG-- 496 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~G--------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs-- 496 (530)
.+.+.+++.++ ..|||.+.+| . |..|.++++|+++| |+.||+|++|||+++.+++++++..+|+..
T Consensus 14 ~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~ 91 (109)
T 1wi4_A 14 PAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL 91 (109)
T ss_dssp TTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred CcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcccc
Confidence 34566777775 4599998742 2 88999999999999 999999999999999999999999999854
Q ss_pred --CCEEEEEEEeCcc
Q psy9257 497 --GSVLTLTLIPTSM 509 (530)
Q Consensus 497 --G~tVtLtVip~~~ 509 (530)
+..++|++.|...
T Consensus 92 r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 92 RSESPWEIAFIRSGP 106 (109)
T ss_dssp SSSSCEEEEEECCCC
T ss_pred CCCceEEEEEEeCCC
Confidence 5789999988753
No 291
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.84 E-value=1.4e-08 Score=89.62 Aligned_cols=78 Identities=28% Similarity=0.461 Sum_probs=66.1
Q ss_pred eeeEEeccCCCCccceeecc---------------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHH
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK---------------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAM 493 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~---------------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iL 493 (530)
.+++++.+...+.|||.+.+ |. |..|.++|+|+++| |+.||+|++|||++|.+++.+++..+|
T Consensus 25 p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 104 (123)
T 2iwq_A 25 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 104 (123)
T ss_dssp CEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35666666666678888742 33 88999999999999 999999999999999998889999999
Q ss_pred HhCCCEEEEEEEeCc
Q psy9257 494 EKGGSVLTLTLIPTS 508 (530)
Q Consensus 494 krsG~tVtLtVip~~ 508 (530)
+..++.++|+|.+..
T Consensus 105 ~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 105 RKAGNPVVFMVQSII 119 (123)
T ss_dssp HHCCSSEEEEEECCC
T ss_pred HcCCCeEEEEEEECC
Confidence 988889999998754
No 292
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=7e-09 Score=86.45 Aligned_cols=78 Identities=26% Similarity=0.425 Sum_probs=66.4
Q ss_pred ceeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
..+.|.|.|.....|||.+.. +. |..|.++++|+++| |+.||+|++|||+++ +.+.+++..+|+..++.+.|+|
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v 84 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKI 84 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEESSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEE
T ss_pred CcEEEEEEECCCCcEeEEEEecCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEE
Confidence 345677777777779999863 33 88999999999987 999999999999999 8888999999998888999999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.+..
T Consensus 85 ~~~~ 88 (91)
T 2e7k_A 85 LSGP 88 (91)
T ss_dssp ECCS
T ss_pred EECC
Confidence 8753
No 293
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.84 E-value=7e-09 Score=91.12 Aligned_cols=80 Identities=29% Similarity=0.515 Sum_probs=68.6
Q ss_pred ceeeEEeccCCCCccceeecc-----------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs 496 (530)
+.++|.|.+.....|||.+.+ |. |..|.++++|+++| |+.||+|++|||+++.+++.+++..+|+..
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 94 (129)
T 2dmz_A 15 ETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNA 94 (129)
T ss_dssp EEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHC
T ss_pred cEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345677766566679999864 22 88999999999999 999999999999999999889999999888
Q ss_pred CCEEEEEEEeCcc
Q psy9257 497 GSVLTLTLIPTSM 509 (530)
Q Consensus 497 G~tVtLtVip~~~ 509 (530)
++.+.|+|.|...
T Consensus 95 ~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 95 GQVVHLTLVRRKT 107 (129)
T ss_dssp CSSEEEEEEEESS
T ss_pred CCeEEEEEEeCCc
Confidence 8999999988653
No 294
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.84 E-value=1.4e-08 Score=85.90 Aligned_cols=78 Identities=22% Similarity=0.362 Sum_probs=64.7
Q ss_pred ceeeEEeccCCCCccceeecc--------Cc-EEEEccCCHHHH-cCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK--------GQ-IVSLVKDSSAAR-NGLLVNHNILEVNGANVVGLKDKELLEAMEK--GG 497 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~--------Gv-V~sVv~gSpAar-AGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG 497 (530)
+.+++.+.+.....|||.+.. +. |..|.++++|++ +||+.||+|++|||+++.+++.+++..+|+. .+
T Consensus 9 ~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g 88 (101)
T 2yt7_A 9 NCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQ 88 (101)
T ss_dssp CCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTS
T ss_pred ceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 445666766655678998852 23 889999999999 5699999999999999988888999999986 78
Q ss_pred CEEEEEEEeC
Q psy9257 498 SVLTLTLIPT 507 (530)
Q Consensus 498 ~tVtLtVip~ 507 (530)
+.++|+|.|.
T Consensus 89 ~~v~l~v~R~ 98 (101)
T 2yt7_A 89 TSVTLSIVHC 98 (101)
T ss_dssp SEEEEEECCC
T ss_pred CeEEEEEEeC
Confidence 9999999764
No 295
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.84 E-value=1.3e-08 Score=89.95 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=65.3
Q ss_pred CceeeEEeccCCCCccceeeccCc----EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhC--CCEEEE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNKGQ----IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKG--GSVLTL 502 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~Gv----V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrs--G~tVtL 502 (530)
++.++|+|.|+.. .|||.+.++. |..|.. +++.+||+.||+|++|||++|.++++++++.+|+.. |..++|
T Consensus 11 ~~~~~V~L~Kg~~-G~GFsI~~~~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L 87 (113)
T 3soe_A 11 GLLVTIPLIKGPK-GFGFAIADSPTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPL 87 (113)
T ss_dssp CEEEEEEEECBTT-BSSEEEEEETTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEEEEECCC-cccEEEeCCCCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 3456777777755 4999997532 677776 578889999999999999999999999999999964 789999
Q ss_pred EEEeCcchhhh
Q psy9257 503 TLIPTSMYQHM 513 (530)
Q Consensus 503 tVip~~~~e~m 513 (530)
+|.|.....-+
T Consensus 88 ~V~R~g~~~p~ 98 (113)
T 3soe_A 88 LILRGGPPSPT 98 (113)
T ss_dssp EEEESSCC---
T ss_pred EEEECCccCcc
Confidence 99998754433
No 296
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=3.5e-09 Score=88.18 Aligned_cols=74 Identities=19% Similarity=0.282 Sum_probs=62.0
Q ss_pred eccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCc
Q psy9257 436 LHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 436 L~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~ 508 (530)
+.......|||.+.+| .|..|.++++|+++||+.||+|++|||+++.+++.+++..+++..++.+.|+|.|..
T Consensus 10 ~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 89 (94)
T 1vb7_A 10 VDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSS 89 (94)
T ss_dssp EEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCC
T ss_pred EEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 3333445689988643 277899999999999999999999999999999888999999977789999998875
Q ss_pred c
Q psy9257 509 M 509 (530)
Q Consensus 509 ~ 509 (530)
.
T Consensus 90 ~ 90 (94)
T 1vb7_A 90 G 90 (94)
T ss_dssp C
T ss_pred c
Confidence 3
No 297
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.83 E-value=2.5e-08 Score=82.32 Aligned_cols=77 Identities=22% Similarity=0.445 Sum_probs=64.2
Q ss_pred eeeEEeccCCCCccceeeccC----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCC
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGS 498 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~ 498 (530)
.+++++.+... .|||.+..+ . |..|.++++|+++| |+.||+|++|||+++.++...++..+++..++
T Consensus 5 ~~~v~l~~~~~-~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 5 TFDVELTKNVQ-GLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEEECBTT-BSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEecCCC-CCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34556655544 489988643 2 88999999999999 99999999999999999988888888888899
Q ss_pred EEEEEEEeCc
Q psy9257 499 VLTLTLIPTS 508 (530)
Q Consensus 499 tVtLtVip~~ 508 (530)
.+.|+|.|..
T Consensus 84 ~v~l~v~r~g 93 (97)
T 2iwn_A 84 TVLLTLMRRG 93 (97)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEeCC
Confidence 9999998754
No 298
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.83 E-value=1.4e-08 Score=96.75 Aligned_cols=93 Identities=22% Similarity=0.351 Sum_probs=74.1
Q ss_pred CCCeeEEEEEec------CCcEEEEEeccCCHhhhcCCCC-CCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecC
Q psy9257 356 ASGLIGLRVCAI------NEGVFVCLVERGSPASLVGLRF-GDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDR 428 (530)
Q Consensus 356 s~G~LG~~V~~~------~~GV~Vs~V~pGSPAakAGLq~-GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~ 428 (530)
..++||+.+... ..|++|..|.++|+|+++||+. ||+|++|||+ +.++.+ +..+++...++.+.|+|.|+
T Consensus 93 ~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~--l~~~l~~~~g~~v~l~v~r~ 169 (209)
T 3rle_A 93 GQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESED--LFSLIETHEAKPLKLYVYNT 169 (209)
T ss_dssp SSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSC--HHHHHHHTTTSCEEEEEEET
T ss_pred ccCccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHH--HHHHHHhCCCCeEEEEEEEC
Confidence 356789988742 2689999999999999999999 9999999998 888776 67777777788999999775
Q ss_pred C--ceeeEEeccC----CCCccceeeccC
Q psy9257 429 P--LERTVTLHRD----SSGHFGFHFNKG 451 (530)
Q Consensus 429 ~--~e~tVtL~kd----~~g~LGfs~~~G 451 (530)
+ +.+++++..+ ..+.||+.+..|
T Consensus 170 ~~~~~~~v~l~p~~~~~g~g~lG~~~~~g 198 (209)
T 3rle_A 170 DTDNCREVIITPNSAWGGEGSLGCGIGYG 198 (209)
T ss_dssp TTTEEEEEEECCCTTSSSSSSSCEEEECS
T ss_pred CceEEEEEEEEecCCCCCceeeeEEecCc
Confidence 4 4467777654 345688877544
No 299
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.82 E-value=8.5e-10 Score=92.79 Aligned_cols=66 Identities=21% Similarity=0.376 Sum_probs=56.1
Q ss_pred CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeEEEEEecCCceeeEEec
Q psy9257 369 EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNIRVVIRDRPLERTVTLH 437 (530)
Q Consensus 369 ~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~VtLtVrR~~~e~tVtL~ 437 (530)
.|++|..|.++|||++ ||+.||+|++|||+.+.++.+ +..+++.. .++.+.|+|.|+++.+++++.
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 67 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEK--LIDYISSKKAGDKVTLKIEREEKEKRVTLT 67 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHH--HHHHHSSCCSSCEECEEEESSSCEECCCEE
T ss_pred CceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHH--HHHHHHcCCCCCEEEEEEEECCEEEEEEEE
Confidence 4788999999999999 999999999999999988644 67777665 588999999998887766654
No 300
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.82 E-value=5.7e-09 Score=92.31 Aligned_cols=78 Identities=22% Similarity=0.472 Sum_probs=65.9
Q ss_pred eeeEEeccCCCCccceeeccC----------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG----------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG-- 496 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G----------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs-- 496 (530)
.+++.|.+.....|||.+.++ . |..|.++++|+++| |+.||+|++|||+.+.+++++++..+|++.
T Consensus 26 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 26 TLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 344556655566799998642 2 88999999999999 999999999999999999999999999865
Q ss_pred -----CCEEEEEEEeCc
Q psy9257 497 -----GSVLTLTLIPTS 508 (530)
Q Consensus 497 -----G~tVtLtVip~~ 508 (530)
++.|+|+|.|..
T Consensus 106 ~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRS 122 (127)
T ss_dssp HHHHHTCEEEEEEEECS
T ss_pred cccCCCCEEEEEEEeCC
Confidence 789999998865
No 301
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=4.1e-09 Score=88.50 Aligned_cols=78 Identities=29% Similarity=0.530 Sum_probs=65.0
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
+.+++++.++..+ |||.+..+ . |..|.++++|+++| |+.||+|++|||+++.+++..++..++++.++.+.
T Consensus 11 ~~~~v~l~~~~~g-~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 89 (103)
T 1wfv_A 11 DYFTVDMEKGAKG-FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89 (103)
T ss_dssp CCEECCEECCTTS-SSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred eEEEEEEecCCCc-CCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3455666666544 89998632 2 77889999999999 99999999999999999988888888888889999
Q ss_pred EEEEeCc
Q psy9257 502 LTLIPTS 508 (530)
Q Consensus 502 LtVip~~ 508 (530)
|+|.|..
T Consensus 90 l~v~R~~ 96 (103)
T 1wfv_A 90 LLLKRGT 96 (103)
T ss_dssp EEEECTT
T ss_pred EEEEECC
Confidence 9998764
No 302
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.82 E-value=1e-08 Score=88.19 Aligned_cols=80 Identities=23% Similarity=0.360 Sum_probs=66.3
Q ss_pred CceeeEEeccCCCCccceeecc-------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK-------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSV 499 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~-------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~t 499 (530)
++.++++|.+... .|||.+.. |. |..|.++++|+++| |+.||+|++|||+.|.++..+++..+++..++.
T Consensus 16 ~~~~~v~l~~~~~-glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 16 GQEMIIEISKGRS-GLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp TSCEEEEEECCSS-CCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CCEEEEEEEECCC-cccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3446666766543 48998863 33 77899999999999 999999999999999999888999999988899
Q ss_pred EEEEEEeCcc
Q psy9257 500 LTLTLIPTSM 509 (530)
Q Consensus 500 VtLtVip~~~ 509 (530)
+.|+|.|...
T Consensus 95 v~l~v~R~~~ 104 (116)
T 2dm8_A 95 VRLVVYRDEA 104 (116)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEeCCc
Confidence 9999987653
No 303
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.81 E-value=3e-08 Score=81.44 Aligned_cols=70 Identities=17% Similarity=0.324 Sum_probs=59.8
Q ss_pred CCCCccceeeccCc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCc
Q psy9257 439 DSSGHFGFHFNKGQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 439 d~~g~LGfs~~~Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~ 508 (530)
+....+||.+..|. |..|.++++|+++| |+.||+|++|||+++.+++.+++..+++..++.+.|+|.|..
T Consensus 12 ~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 12 AKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 83 (92)
T ss_dssp STTSCCCEEEEEEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC--
T ss_pred CCCCCCCEEEeCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 34456898876665 88999999999999 999999999999999988888999999887789999998765
No 304
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.81 E-value=2.8e-08 Score=79.25 Aligned_cols=72 Identities=17% Similarity=0.324 Sum_probs=61.1
Q ss_pred eccCCCCccceeeccCc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeC
Q psy9257 436 LHRDSSGHFGFHFNKGQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPT 507 (530)
Q Consensus 436 L~kd~~g~LGfs~~~Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~ 507 (530)
+.+.....+||.+..|. |..|.++++|+++| |+.||+|++|||+++.+++.+++..+++..++.+.|+|.|.
T Consensus 7 ~~~~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 7 VKSRKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp ECCSTTCCCCEEEEEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred EECCCCCCCCEEEeCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 44455567898876665 88999999999999 99999999999999998888899999987777899998764
No 305
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.81 E-value=3.5e-09 Score=93.13 Aligned_cols=56 Identities=21% Similarity=0.473 Sum_probs=52.8
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTS 508 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~ 508 (530)
|..|.++++|+++||+.||+|++|||++|.+++.+++..+|++.++.++|+|.|..
T Consensus 65 V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 65 VKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp BCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred EEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 88899999999999999999999999999999999999999988999999998765
No 306
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.81 E-value=1.1e-08 Score=87.77 Aligned_cols=80 Identities=25% Similarity=0.387 Sum_probs=67.4
Q ss_pred cCCceeeEEeccCCCCccceeecc------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCE
Q psy9257 427 DRPLERTVTLHRDSSGHFGFHFNK------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSV 499 (530)
Q Consensus 427 R~~~e~tVtL~kd~~g~LGfs~~~------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~t 499 (530)
|..+++++.+.+.....|||.+.. |. |..|.++++|+++||+.||+|++|||+++.++.+.++..+++.. +.
T Consensus 12 ~~~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~ 90 (114)
T 1x5n_A 12 RENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RS 90 (114)
T ss_dssp CCCSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC-SS
T ss_pred CCCCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-Ce
Confidence 455677888877667779999973 33 88999999999999999999999999999999887888888765 57
Q ss_pred EEEEEEeC
Q psy9257 500 LTLTLIPT 507 (530)
Q Consensus 500 VtLtVip~ 507 (530)
+.|+|.|.
T Consensus 91 v~l~v~r~ 98 (114)
T 1x5n_A 91 LTISIVAA 98 (114)
T ss_dssp EEEEECSS
T ss_pred EEEEEEcC
Confidence 89998776
No 307
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.81 E-value=2.2e-08 Score=85.45 Aligned_cols=65 Identities=15% Similarity=0.274 Sum_probs=53.5
Q ss_pred cEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceeeEEe
Q psy9257 370 GVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERTVTL 436 (530)
Q Consensus 370 GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~tVtL 436 (530)
|+.|..+.++|+|+++||+.||+|++|||+.+.+|.+ +..++.. ..++.+.|+|.|+++.+++.+
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d--~~~~~~~~~~g~~v~l~v~R~g~~~~~~v 103 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNV--MNTLFQSMNEMTEMSLTVERDGQQHDVYI 103 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTH--HHHHHHHHTTCSEEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCeEEEEEEECCEEEEEEE
Confidence 5667777788888999999999999999999999977 4455553 567899999999887776654
No 308
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.81 E-value=1.6e-08 Score=104.68 Aligned_cols=85 Identities=27% Similarity=0.441 Sum_probs=73.1
Q ss_pred cCCCeeEEEEEec---CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCc-
Q psy9257 355 DASGLIGLRVCAI---NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPL- 430 (530)
Q Consensus 355 ~s~G~LG~~V~~~---~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~- 430 (530)
+..++||+.+... +.+++|..|.++|||+++||+.||+|++|||+.+.++...++..+++...+..|.|+|.|.+.
T Consensus 82 g~~~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~ 161 (388)
T 1fc6_A 82 GSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGAP 161 (388)
T ss_dssp SSCBBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTEE
T ss_pred CceEEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCCC
Confidence 4556789998865 578999999999999999999999999999999999976678888877778999999999876
Q ss_pred --eeeEEeccC
Q psy9257 431 --ERTVTLHRD 439 (530)
Q Consensus 431 --e~tVtL~kd 439 (530)
.++++|.++
T Consensus 162 ~~~~~~~l~r~ 172 (388)
T 1fc6_A 162 SNTRTLQLTRQ 172 (388)
T ss_dssp EEEEEEEEECB
T ss_pred cceEEEEEEEc
Confidence 677777654
No 309
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=1.3e-08 Score=87.09 Aligned_cols=77 Identities=25% Similarity=0.419 Sum_probs=64.5
Q ss_pred eeeEEeccCCCCccceeeccC--------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh-----C
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG--------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK-----G 496 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G--------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr-----s 496 (530)
.+.|.|.+.. ..|||.+.+| .|..|.++++|+++| |+.||+|++|||+++.+++++++..+|++ .
T Consensus 7 ~~~v~l~k~~-~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 85 (103)
T 1ufx_A 7 GTLVRVKKSA-ATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKD 85 (103)
T ss_dssp SEEEEEECCS-SSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSS
T ss_pred eEEEEEEcCC-CcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCC
Confidence 4556665554 4599999743 489999999999999 99999999999999999999999999986 6
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.+.++|.|..
T Consensus 86 ~~~i~l~v~r~~ 97 (103)
T 1ufx_A 86 RDYIDFLVTEFN 97 (103)
T ss_dssp CSEEEEEECCCC
T ss_pred CCeEEEEEEEcc
Confidence 788999987753
No 310
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=7.8e-09 Score=87.30 Aligned_cols=76 Identities=17% Similarity=0.314 Sum_probs=61.5
Q ss_pred eEEeccCCCCccceeeccC-------cEEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEE
Q psy9257 433 TVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTL 504 (530)
Q Consensus 433 tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtV 504 (530)
++++.......|||.+.+| .|..|.++++|+++ ||+.||+|++|||+++.++ ..++...++..++.+.|+|
T Consensus 12 ~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v 90 (100)
T 2edp_A 12 YVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIV 90 (100)
T ss_dssp EEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEE
Confidence 3334333335689998643 27789999999999 9999999999999999997 6788888888888999999
Q ss_pred EeCcc
Q psy9257 505 IPTSM 509 (530)
Q Consensus 505 ip~~~ 509 (530)
.|...
T Consensus 91 ~R~~~ 95 (100)
T 2edp_A 91 RRRNS 95 (100)
T ss_dssp EECCC
T ss_pred EeCCC
Confidence 88753
No 311
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.80 E-value=5.5e-09 Score=104.28 Aligned_cols=82 Identities=26% Similarity=0.416 Sum_probs=71.9
Q ss_pred ceeeEEeccCCCCccceeeccC------c-EEEEccCCHHHH-cCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG------Q-IVSLVKDSSAAR-NGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G------v-V~sVv~gSpAar-AGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
+.++|+|.|...+.|||.+.+| . |..|.++++|++ +||+.||+|++|||++|.++++++++.+|+..++.|+
T Consensus 77 ~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~ 156 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 156 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCC
T ss_pred ccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEE
Confidence 4677888888767799999764 2 889999999999 6999999999999999999999999999999899999
Q ss_pred EEEEeCcchh
Q psy9257 502 LTLIPTSMYQ 511 (530)
Q Consensus 502 LtVip~~~~e 511 (530)
|+|.+.....
T Consensus 157 L~V~R~~~~~ 166 (263)
T 1z87_A 157 LEVKYMKEVS 166 (263)
T ss_dssp EEEECCSSSS
T ss_pred EEEEeCcccc
Confidence 9999865443
No 312
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.80 E-value=6.7e-09 Score=85.51 Aligned_cols=67 Identities=21% Similarity=0.332 Sum_probs=56.5
Q ss_pred cEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceeeEEecc
Q psy9257 370 GVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERTVTLHR 438 (530)
Q Consensus 370 GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~tVtL~k 438 (530)
.++|..|.++|+|+++||+.||+|++|||+.+.++.+ +...+....++.+.|+|.|+++.+++.+..
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~~~~g~~v~l~v~R~g~~~~~~v~~ 71 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVT--FVMLVRDNPGXSLALEIERQGSPLSLTLIP 71 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHH--HHHHHHHCTTCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHH--HHHHHhcCCCCeEEEEEEECCeEEEEEEEE
Confidence 3578899999999999999999999999999998754 666776667789999999988887777653
No 313
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.79 E-value=2.1e-08 Score=82.22 Aligned_cols=77 Identities=30% Similarity=0.401 Sum_probs=60.0
Q ss_pred ceeeEEeccCCCCccceeecc-----CcEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----GvV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtL 502 (530)
+.++++|.++.. .|||.+.. |.+....++++|+ +||+.||+|++|||+++.+++.+++...+++ .++.+.|
T Consensus 3 ~~~~v~l~k~~~-g~G~~~~~~~~~~~~~v~~v~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 80 (88)
T 3bpu_A 3 ELITVHIVKGPM-GFGFTIADSPGGGGQRVKQIVDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTL 80 (88)
T ss_dssp EEEEEEEECBTT-BSSCEEEECTTSSSEEEEECCC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEE
T ss_pred cEEEEEEEcCCC-ceeEEEEecCCCCcEEEEEecCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEE
Confidence 346677777654 48999862 3444445999999 9999999999999999999988889988885 6789999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.|..
T Consensus 81 ~v~R~g 86 (88)
T 3bpu_A 81 LVQRQT 86 (88)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 998753
No 314
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.79 E-value=1e-08 Score=86.64 Aligned_cols=75 Identities=16% Similarity=0.354 Sum_probs=63.2
Q ss_pred eeeEEeccCCCCccceeecc--------------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK--------------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK 495 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~--------------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr 495 (530)
.+++++.++. .|||.+.+ |. |..|.++++|++ ||+.||+|++|||+++.++++.++...+++
T Consensus 12 ~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 88 (103)
T 1n7t_A 12 EIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT 88 (103)
T ss_dssp CEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 4455666654 58998865 22 778999999999 999999999999999999998899999998
Q ss_pred CCCEEEEEEEeCc
Q psy9257 496 GGSVLTLTLIPTS 508 (530)
Q Consensus 496 sG~tVtLtVip~~ 508 (530)
.++.+.|+|.|..
T Consensus 89 ~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 89 FQNTVELIIVREV 101 (103)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEecC
Confidence 8999999998753
No 315
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.79 E-value=2e-08 Score=94.37 Aligned_cols=79 Identities=20% Similarity=0.355 Sum_probs=68.6
Q ss_pred ceeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
..+.|+|.+...+.|||.+.+| .|..|.++|+|+++||+.||+|++|||++|.+++.+++..+++. ++.+.|
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~l 162 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVSI 162 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEEE
Confidence 4456778777667799999644 28899999999999999999999999999999988999998888 899999
Q ss_pred EEEeCcc
Q psy9257 503 TLIPTSM 509 (530)
Q Consensus 503 tVip~~~ 509 (530)
+|.+...
T Consensus 163 ~v~r~g~ 169 (192)
T 3k1r_A 163 KVRHIGL 169 (192)
T ss_dssp EEEECCE
T ss_pred EEEECCc
Confidence 9998754
No 316
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.79 E-value=1e-08 Score=88.83 Aligned_cols=81 Identities=15% Similarity=0.313 Sum_probs=65.0
Q ss_pred ceeeEEeccCCCCccceeeccC-------c-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhCCC-E
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG-------Q-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKGGS-V 499 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G-------v-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrsG~-t 499 (530)
..+.+.|.++....|||.+.++ . |..|.++++|+++| |+.||+|++|||+.|.+++..++..++++.++ .
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~ 94 (119)
T 1x6d_A 15 GIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPR 94 (119)
T ss_dssp TEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSS
T ss_pred CeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 3455666676667799998643 3 89999999999999 99999999999999999999999999986554 4
Q ss_pred EEEEEEeCcch
Q psy9257 500 LTLTLIPTSMY 510 (530)
Q Consensus 500 VtLtVip~~~~ 510 (530)
+.+++.|....
T Consensus 95 ~~l~v~R~~~~ 105 (119)
T 1x6d_A 95 QAVIVTRKLTP 105 (119)
T ss_dssp EEEEEEECCCS
T ss_pred EEEEEEcCCCc
Confidence 55777776543
No 317
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.78 E-value=1e-08 Score=90.89 Aligned_cols=78 Identities=23% Similarity=0.332 Sum_probs=65.9
Q ss_pred ceeeEEeccCCCCccceeeccC---------c-EEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHhC-C
Q psy9257 430 LERTVTLHRDSSGHFGFHFNKG---------Q-IVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEKG-G 497 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~G---------v-V~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkrs-G 497 (530)
+.++|+|.++. ..|||.+.+| . |..|.++++|+++ ||+.||+|++|||+++.+++++++..+|+.. +
T Consensus 29 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 107 (130)
T 1i16_A 29 TVCTVTLEKMS-AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPD 107 (130)
T ss_dssp EEEEEEEETTS-SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCS
T ss_pred cEEEEEEEcCC-CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45667777765 4599999743 2 8999999999999 8999999999999999999999999999976 4
Q ss_pred CEEEEEEEeCc
Q psy9257 498 SVLTLTLIPTS 508 (530)
Q Consensus 498 ~tVtLtVip~~ 508 (530)
..+.|+|.|..
T Consensus 108 ~~v~l~v~r~~ 118 (130)
T 1i16_A 108 GPVTIVIRRKS 118 (130)
T ss_dssp SEEEEEEEEES
T ss_pred ceEEEEEEeCC
Confidence 57999998764
No 318
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=7.6e-09 Score=86.87 Aligned_cols=78 Identities=21% Similarity=0.413 Sum_probs=65.8
Q ss_pred ceeeEEeccCCC-Cccceeecc--Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEE
Q psy9257 430 LERTVTLHRDSS-GHFGFHFNK--GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLI 505 (530)
Q Consensus 430 ~e~tVtL~kd~~-g~LGfs~~~--Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVi 505 (530)
..++++|.++.. ..+||.+.+ +. |..|.++++|+ +||+.||+|++|||++|.++.+.++...+++.++.+.|+|.
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~ 86 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISESLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVV 86 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCSSSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEE
T ss_pred ccEEEEEEECCCCCcccEEEecCCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 456677777653 358998864 33 88999999995 99999999999999999999988999999888999999999
Q ss_pred eCc
Q psy9257 506 PTS 508 (530)
Q Consensus 506 p~~ 508 (530)
|..
T Consensus 87 R~~ 89 (96)
T 2edv_A 87 RCT 89 (96)
T ss_dssp ECC
T ss_pred ECC
Confidence 875
No 319
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.77 E-value=5.1e-08 Score=85.36 Aligned_cols=78 Identities=18% Similarity=0.415 Sum_probs=63.7
Q ss_pred ceeeEEeccCCCCccceeecc---------C-cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHhC--
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---------G-QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEKG-- 496 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---------G-vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkrs-- 496 (530)
+.+.+.+.+... .|||.+.. | .|..|.++++|+++| |+.||+|++|||++|.+++.+++..+++..
T Consensus 30 ~~~~v~l~~~~~-~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 108 (121)
T 2kom_A 30 KRLNIQLKKGTE-GLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKM 108 (121)
T ss_dssp EEEEEEEECCTT-CCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred eEEEEEEEcCCC-cEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Confidence 445566666544 48888753 2 288999999999999 999999999999999999888899988864
Q ss_pred CCEEEEEEEeCc
Q psy9257 497 GSVLTLTLIPTS 508 (530)
Q Consensus 497 G~tVtLtVip~~ 508 (530)
++.++|+|.|..
T Consensus 109 g~~v~l~v~R~g 120 (121)
T 2kom_A 109 EGTVSLLVFRQE 120 (121)
T ss_dssp SCEEEEEEEECC
T ss_pred CCEEEEEEEeCC
Confidence 789999998753
No 320
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.75 E-value=6.9e-09 Score=87.22 Aligned_cols=68 Identities=22% Similarity=0.326 Sum_probs=58.0
Q ss_pred CCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhC-CCCeEEEEEecCCceeeEEecc
Q psy9257 368 NEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAA-PVNNIRVVIRDRPLERTVTLHR 438 (530)
Q Consensus 368 ~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a-~G~~VtLtVrR~~~e~tVtL~k 438 (530)
..|++|..|.++|+|++ ||+.||+|++|||+.+.++.+ +..+++.. .++.+.|+|.|+++.+++++..
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQ--IVSYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHH--HHHHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHH--HHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 46899999999999999 999999999999999988644 66677665 6889999999998887777653
No 321
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.74 E-value=2.4e-08 Score=84.18 Aligned_cols=64 Identities=16% Similarity=0.163 Sum_probs=51.3
Q ss_pred EEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCC-CCeEEEEEecCC--ceeeEEe
Q psy9257 371 VFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAP-VNNIRVVIRDRP--LERTVTL 436 (530)
Q Consensus 371 V~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~-G~~VtLtVrR~~--~e~tVtL 436 (530)
.+|..|.++|+|+++||+.||+|++|||+.|.+|.+ +...+.... ++.+.|+|.|++ .+++++|
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d--~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l 70 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDA--VRLQLVDKIGDESTTITVAPFGSDQRRDVKL 70 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHH--HHHHHHHTTTCSEEEEEEECTTCCCCEEEEE
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHHhcCCCcEEEEEEECCCCceEEEEE
Confidence 368899999999999999999999999999999865 566665544 478999999875 3444444
No 322
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.73 E-value=4.6e-08 Score=80.30 Aligned_cols=66 Identities=26% Similarity=0.299 Sum_probs=55.5
Q ss_pred Cccceeecc---Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeC
Q psy9257 442 GHFGFHFNK---GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPT 507 (530)
Q Consensus 442 g~LGfs~~~---Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~ 507 (530)
..|||.+.. |. |..|.++++|+++||+.||+|++|||+++.+.+.+++..+++ +.++.+.|+|.|.
T Consensus 17 ~~lG~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 17 LDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp SCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CcccEEEEecCCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeC
Confidence 468988752 33 889999999999999999999999999996666678888887 3588999999875
No 323
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=3.2e-08 Score=85.46 Aligned_cols=77 Identities=19% Similarity=0.280 Sum_probs=63.5
Q ss_pred eeeEEeccCCCCccceeeccC----c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG----Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLI 505 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G----v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVi 505 (530)
.+.|.+.+.. ..|||.+..+ . |..|.++++|+++||+.||+|++|||++|.++.+.+....+++.++.+.|+|.
T Consensus 20 ~~~v~l~~~~-~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~ 98 (117)
T 1uit_A 20 PRHVKVQKGS-EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQ 98 (117)
T ss_dssp CEEEEEECSS-CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEEC
T ss_pred CEEEEEEeCC-CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 3466676655 4589988643 3 88999999999999999999999999999999877766666678899999998
Q ss_pred eCc
Q psy9257 506 PTS 508 (530)
Q Consensus 506 p~~ 508 (530)
|..
T Consensus 99 r~~ 101 (117)
T 1uit_A 99 YNP 101 (117)
T ss_dssp CCS
T ss_pred ECC
Confidence 764
No 324
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.72 E-value=4.1e-08 Score=91.72 Aligned_cols=79 Identities=23% Similarity=0.412 Sum_probs=66.7
Q ss_pred EEEeccCCCeeEEEEEec-----CCcEEEEEeccCCHhhhcC-CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 350 LVLCKDASGLIGLRVCAI-----NEGVFVCLVERGSPASLVG-LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 350 V~L~K~s~G~LG~~V~~~-----~~GV~Vs~V~pGSPAakAG-Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
+.+.+.....|||.+... ..|++|..|.++|+|+++| |+.||+|++|||+.+.+++.+++..+++.. +..+.|
T Consensus 111 v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l 189 (196)
T 1p1d_A 111 VKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKL 189 (196)
T ss_dssp EEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEE
T ss_pred EEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEE
Confidence 334333445689998865 5789999999999999999 999999999999999997777899999887 889999
Q ss_pred EEecCC
Q psy9257 424 VIRDRP 429 (530)
Q Consensus 424 tVrR~~ 429 (530)
+|.|++
T Consensus 190 ~v~R~~ 195 (196)
T 1p1d_A 190 KIRKDE 195 (196)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 998864
No 325
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.72 E-value=7.3e-08 Score=90.02 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=67.4
Q ss_pred eeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTL 502 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtL 502 (530)
.+.+.|.+...+.|||.+..| .|..|.++++|+++ ||+.||+|++|||+.+.++++.++..+++..++.+.|
T Consensus 8 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 87 (200)
T 2qt5_A 8 STVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVL 87 (200)
T ss_dssp EEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEE
T ss_pred CEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 355667776677799999643 29999999999999 9999999999999999999999999999888999999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.|..
T Consensus 88 ~v~R~~ 93 (200)
T 2qt5_A 88 EVEYEL 93 (200)
T ss_dssp EEEEEC
T ss_pred EEeccC
Confidence 998743
No 326
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.71 E-value=6.4e-08 Score=80.81 Aligned_cols=76 Identities=32% Similarity=0.514 Sum_probs=61.2
Q ss_pred eeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCC-EEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGS-VLTLT 503 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~-tVtLt 503 (530)
.+.+.+.+... .|||.+.. |. |..|.++|+|+++||+.||+|++|||+++.+++.+++..+++...+ .+.|+
T Consensus 10 ~~~~~l~~~~~-g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~ 88 (98)
T 2jxo_A 10 PRLCTMKKGPS-GYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLV 88 (98)
T ss_dssp CEEEEEECTTT-CCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEE
T ss_pred cEEEEEEeCCC-cccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEE
Confidence 45566666654 48999863 33 8899999999999999999999999999999888899999986544 55677
Q ss_pred EEeC
Q psy9257 504 LIPT 507 (530)
Q Consensus 504 Vip~ 507 (530)
|.|.
T Consensus 89 v~R~ 92 (98)
T 2jxo_A 89 VDRE 92 (98)
T ss_dssp CCHH
T ss_pred EECC
Confidence 7654
No 327
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.71 E-value=4.1e-08 Score=88.40 Aligned_cols=64 Identities=17% Similarity=0.313 Sum_probs=52.5
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEEEEeCcchhhhhhc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLTLIPTSMYQHMMKK 516 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLtVip~~~~e~m~kk 516 (530)
|..|.++++|+++||+.||+|++|||+++.+++.+++..+|+. .|+.+.|+|.|.........+
T Consensus 68 V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~v~~~ 132 (139)
T 2vz5_A 68 VTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQKAVQQS 132 (139)
T ss_dssp EEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC-------C
T ss_pred EEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEEEEEEEe
Confidence 8899999999999999999999999999999888899998875 678999999998755444443
No 328
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.70 E-value=4.2e-08 Score=85.57 Aligned_cols=66 Identities=21% Similarity=0.396 Sum_probs=57.4
Q ss_pred ccceeeccC--------cEEEEccCCHHHHc-CCCCCCEEEEEcCeecCCCChHHHHHHHHh----CCCEEEEEEEeCc
Q psy9257 443 HFGFHFNKG--------QIVSLVKDSSAARN-GLLVNHNILEVNGANVVGLKDKELLEAMEK----GGSVLTLTLIPTS 508 (530)
Q Consensus 443 ~LGfs~~~G--------vV~sVv~gSpAarA-GLr~GDrILeVNGq~V~gls~eeVv~iLkr----sG~tVtLtVip~~ 508 (530)
.|||.+.+| .|..|.++++|+++ ||+.||+|++|||+.+.+++.+++..+|++ .++.++|+|.|..
T Consensus 29 glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 29 SLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp CCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred ccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 589988643 28899999999999 899999999999999999998888888874 3889999998853
No 329
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=9.2e-08 Score=80.51 Aligned_cols=77 Identities=26% Similarity=0.371 Sum_probs=63.2
Q ss_pred CceeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEE
Q psy9257 429 PLERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTL 502 (530)
Q Consensus 429 ~~e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtL 502 (530)
.+.++++|.+... .|||.+.+ |. |..|.++ |+++||+.||+|++|||++|.+++++++..+|+. .++.+.|
T Consensus 9 ~~~~~v~l~~~~~-g~G~~i~~~~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 85 (96)
T 1ujv_A 9 AELMTLTIVKGAQ-GFGFTIADSPTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSL 85 (96)
T ss_dssp CCCEEEEEECCSS-SSSEEEEEETTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEE
T ss_pred ceEEEEEEEeCCC-ceeEEEEcCCCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 3556777777664 48999863 33 7788773 7889999999999999999999998999999986 4789999
Q ss_pred EEEeCc
Q psy9257 503 TLIPTS 508 (530)
Q Consensus 503 tVip~~ 508 (530)
+|.|..
T Consensus 86 ~v~R~g 91 (96)
T 1ujv_A 86 IIHRGS 91 (96)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 998864
No 330
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.68 E-value=8.5e-08 Score=81.92 Aligned_cols=79 Identities=23% Similarity=0.336 Sum_probs=65.5
Q ss_pred eeEEeccCCCCccceeecc-----C-cEEEEccCCHHHHcCC-CCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNK-----G-QIVSLVKDSSAARNGL-LVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLT 503 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~-----G-vV~sVv~gSpAarAGL-r~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLt 503 (530)
++++|.+.....|||.+.. | .|..|.++++|+++|| +.||+|++|||+.+.++..+++..+++. .++.+.|+
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~ 82 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL 82 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEE
T ss_pred EEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEE
Confidence 4566666666669999863 2 3889999999999997 9999999999999999888889988875 56899999
Q ss_pred EEeCcch
Q psy9257 504 LIPTSMY 510 (530)
Q Consensus 504 Vip~~~~ 510 (530)
|.|....
T Consensus 83 v~R~g~~ 89 (112)
T 1qau_A 83 ILRGPEG 89 (112)
T ss_dssp EEECCTT
T ss_pred EEeCCcc
Confidence 9987643
No 331
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.67 E-value=8.4e-08 Score=83.81 Aligned_cols=80 Identities=30% Similarity=0.466 Sum_probs=65.1
Q ss_pred ceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhC-CCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKG-GSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrs-G~tVtL 502 (530)
..+.+++.++..+ |||.+.. |. |..|.++++|+++||+.||+|++|||+++.+++.+++..+++.. +..+.|
T Consensus 9 ~~r~v~l~~~~~g-~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l 87 (128)
T 2kjd_A 9 RPRLCTMKKGPSG-YGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLL 87 (128)
T ss_dssp CCEEEEEECCSSS-CCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEE
T ss_pred CcEEEEEecCCCc-ccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEE
Confidence 4566777777654 8999863 33 88999999999999999999999999999998888999999865 456778
Q ss_pred EEEeCcch
Q psy9257 503 TLIPTSMY 510 (530)
Q Consensus 503 tVip~~~~ 510 (530)
+|.|....
T Consensus 88 ~v~R~g~~ 95 (128)
T 2kjd_A 88 VVDRETDE 95 (128)
T ss_dssp EECHHHHH
T ss_pred EEEeCCcc
Confidence 88776543
No 332
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.66 E-value=6.2e-08 Score=82.92 Aligned_cols=73 Identities=19% Similarity=0.377 Sum_probs=56.4
Q ss_pred eeeEEeccCCC--Cccceeecc-------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 431 ERTVTLHRDSS--GHFGFHFNK-------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 431 e~tVtL~kd~~--g~LGfs~~~-------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
.+.|+|.|... ..+||.+.. |. |..|.++|+|+++||+.||+|++|||++|.+++.+++..++++ ..+
T Consensus 7 ~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~l 84 (94)
T 3kzd_A 7 THSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--PSL 84 (94)
T ss_dssp EEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS--SEE
T ss_pred eeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CeE
Confidence 34556666543 358888863 22 8899999999999999999999999999999998999998875 456
Q ss_pred EEEEE
Q psy9257 501 TLTLI 505 (530)
Q Consensus 501 tLtVi 505 (530)
+|+|.
T Consensus 85 ~ltV~ 89 (94)
T 3kzd_A 85 GLLVR 89 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66664
No 333
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.65 E-value=1e-07 Score=84.14 Aligned_cols=67 Identities=22% Similarity=0.355 Sum_probs=59.0
Q ss_pred Cccceeecc----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCc
Q psy9257 442 GHFGFHFNK----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTS 508 (530)
Q Consensus 442 g~LGfs~~~----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~ 508 (530)
..|||.+.. |. |..|.++++|+++||+.||+|++|||+.|.+++.+++..+|+ +.++.++|+|.+..
T Consensus 39 ~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 39 DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp SCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 458998864 33 889999999999999999999999999999998888988887 57889999998875
No 334
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.64 E-value=1.1e-08 Score=86.66 Aligned_cols=77 Identities=19% Similarity=0.303 Sum_probs=63.1
Q ss_pred eeeEEeccCCCCccceeeccC-------cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
++++.+.. ...|||.+..+ .|..|.++++|+++||+.||+|++|||+++.+++.+++..+|++.++.+.|+
T Consensus 6 ~~~v~~~~--~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 83 (103)
T 1v5l_A 6 SGNVVLPG--PAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK 83 (103)
T ss_dssp CBCCEEES--SSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECE
T ss_pred EEEEEEcC--CCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 34444433 24588888643 2778899999999999999999999999999988889999998879999999
Q ss_pred EEeCcc
Q psy9257 504 LIPTSM 509 (530)
Q Consensus 504 Vip~~~ 509 (530)
|.|...
T Consensus 84 v~R~g~ 89 (103)
T 1v5l_A 84 IDRAET 89 (103)
T ss_dssp ECCCTT
T ss_pred EEECCe
Confidence 988763
No 335
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.06 E-value=3.9e-09 Score=91.83 Aligned_cols=74 Identities=27% Similarity=0.434 Sum_probs=62.3
Q ss_pred eeEEeccCCCCccceeeccC-------cEEEEccCCHHHH-cCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNKG-------QIVSLVKDSSAAR-NGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLT 503 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~G-------vV~sVv~gSpAar-AGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLt 503 (530)
+++.|.++....|||.+.+| .|..|.++|+|++ +||+.||+|++|||++|.+++.+++..++++.++.++|+
T Consensus 29 ~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l~ 108 (112)
T 2lob_A 29 RKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFE 108 (112)
Confidence 45566666666799998764 3889999999999 899999999999999999888888999998777778887
Q ss_pred EE
Q psy9257 504 LI 505 (530)
Q Consensus 504 Vi 505 (530)
|.
T Consensus 109 V~ 110 (112)
T 2lob_A 109 VV 110 (112)
Confidence 75
No 336
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.61 E-value=1e-07 Score=84.69 Aligned_cols=77 Identities=30% Similarity=0.292 Sum_probs=60.8
Q ss_pred cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHh-CCCCeEEEEEecCCceeeEEeccC----CC
Q psy9257 367 INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKA-APVNNIRVVIRDRPLERTVTLHRD----SS 441 (530)
Q Consensus 367 ~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~-a~G~~VtLtVrR~~~e~tVtL~kd----~~ 441 (530)
...|++|..|.++++|+++ |+.||+|++|||+.+.++.+ +..+++. ..++.+.|+| |+++ +++++... ..
T Consensus 23 ~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~d--l~~~l~~~~~g~~v~l~V-R~g~-~~v~l~~~~~~~~~ 97 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTT--YSAALKTISVGEVINITT-DQGT-FHLKTGRNPNNSSR 97 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHH--HHHHHTTCCTTCEEEEEE-TTEE-EEEECCBCSSSCCS
T ss_pred CCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEEEE-ECCE-EEEEEeccCCCCCc
Confidence 3478999999999999999 99999999999999998755 6666653 5678999999 8777 77777642 12
Q ss_pred Cccceee
Q psy9257 442 GHFGFHF 448 (530)
Q Consensus 442 g~LGfs~ 448 (530)
..+|+.+
T Consensus 98 ~~lGi~~ 104 (125)
T 2hga_A 98 AYMGIRT 104 (125)
T ss_dssp CBCCEEE
T ss_pred eEEEEEe
Confidence 3466654
No 337
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.61 E-value=1.4e-07 Score=79.37 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=49.9
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEEEEeC
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLTLIPT 507 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLtVip~ 507 (530)
|..|.++|+|+++||+.||+|++|||+++.++..+++...+++ .++.+.|+|.|+
T Consensus 49 V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 49 VTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp EEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred EEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 8899999999999999999999999999999988889988874 568999998764
No 338
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=6e-08 Score=81.54 Aligned_cols=78 Identities=28% Similarity=0.431 Sum_probs=60.1
Q ss_pred ceeeEEeccC-CCCccceeeccC------c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEE
Q psy9257 430 LERTVTLHRD-SSGHFGFHFNKG------Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd-~~g~LGfs~~~G------v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVt 501 (530)
+.+++.+.+. ....|||.+..+ . |..|.++++|+++||+.||+|++|||+.+.++.+.++...+ +.++.+.
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~-~~~~~v~ 86 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKAL-KGSKKLV 86 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHS-SSSSSCC
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhh-cCCCeEE
Confidence 3455666553 345699998643 3 88999999999999999999999999999999876555544 4456788
Q ss_pred EEEEeCc
Q psy9257 502 LTLIPTS 508 (530)
Q Consensus 502 LtVip~~ 508 (530)
|+|.|..
T Consensus 87 l~v~R~g 93 (101)
T 1uez_A 87 LSVYSAG 93 (101)
T ss_dssp EEECCCC
T ss_pred EEEEECC
Confidence 8887754
No 339
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.59 E-value=5.3e-08 Score=87.14 Aligned_cols=77 Identities=26% Similarity=0.357 Sum_probs=64.3
Q ss_pred ceeeEEeccCCCCccceeecc---C-cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---G-QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTL 502 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---G-vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtL 502 (530)
..+++.|.+...+ |||.+.. + .|..|.++++|+++| |+.||+|++|||++|.+.+.+++..+|+. .|+.++|
T Consensus 27 ~~~~~~l~k~~~g-lG~~i~~~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l 105 (126)
T 1wif_A 27 KVIQTKLTVGNLG-LGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQI 105 (126)
T ss_dssp CEEEEEEECCTTC-CCCCEEEETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEE
T ss_pred ceEEEEEecCCce-EeEEEEcCCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEE
Confidence 3445666666554 8998753 2 288999999999999 99999999999999998888999999985 5889999
Q ss_pred EEEeC
Q psy9257 503 TLIPT 507 (530)
Q Consensus 503 tVip~ 507 (530)
+|.|.
T Consensus 106 ~V~R~ 110 (126)
T 1wif_A 106 KAYRG 110 (126)
T ss_dssp EEESS
T ss_pred EEEEC
Confidence 99987
No 340
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.59 E-value=3.9e-08 Score=85.43 Aligned_cols=77 Identities=17% Similarity=0.292 Sum_probs=62.2
Q ss_pred eeeEEeccCCCCccceeeccC--c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCC-CEEEEEEEe
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG--Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGG-SVLTLTLIP 506 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G--v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG-~tVtLtVip 506 (530)
.++|.|.+.. ..|||.+.++ . |..|.++++|+++||+.||+|++|||++|.+++.+++..+|+..+ +.+.|+|.+
T Consensus 16 ~r~v~l~~~~-~~~G~~l~~~~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 16 PRGIHFTVEE-GDLGFTLRGNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp CCCCCEECCS-SCCSCCEESSSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CeEEEEEcCC-CcccEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 3556676653 5589988643 3 788999999999999999999999999999888889999988654 469999876
Q ss_pred Cc
Q psy9257 507 TS 508 (530)
Q Consensus 507 ~~ 508 (530)
..
T Consensus 95 ~~ 96 (111)
T 1vae_A 95 LL 96 (111)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 341
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.56 E-value=8.8e-08 Score=92.79 Aligned_cols=83 Identities=30% Similarity=0.456 Sum_probs=67.7
Q ss_pred cCCceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 427 DRPLERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 427 R~~~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
+..+.+.|+|.++..+ |||.+.. |. |..|..+++|+++||+.||+|++|||+.|.++..+++..+|+..++.+
T Consensus 6 ~~~~~r~v~l~k~~~g-lG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v 84 (216)
T 2krg_A 6 TMLRPRLCTMKKGPSG-YGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (216)
T ss_dssp TTCCCEEEEEECCSSS-SCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEE
T ss_pred cccceEEEEEEeCCCC-ceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 3445677777777654 9999863 33 899999999999999999999999999999888788998888668888
Q ss_pred -EEEEEeCcch
Q psy9257 501 -TLTLIPTSMY 510 (530)
Q Consensus 501 -tLtVip~~~~ 510 (530)
.|+|.|....
T Consensus 85 ~~l~V~R~g~~ 95 (216)
T 2krg_A 85 KLLVVDRETDE 95 (216)
T ss_dssp EEEECCHHHHH
T ss_pred EEEEEEECCEE
Confidence 8888765533
No 342
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.56 E-value=4e-07 Score=83.03 Aligned_cols=78 Identities=24% Similarity=0.429 Sum_probs=63.9
Q ss_pred ceeeEEeccCCCCccceeecc---Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLTL 504 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLtV 504 (530)
+.++|.|.+...+.|||.+.. |. |..|.++++|+++||+.||+|++|||+++.++.++....+++. .++.++|+|
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~v 83 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI 83 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEE
Confidence 456788888777789999863 33 8899999999999999999999999999999986556666654 566999999
Q ss_pred EeC
Q psy9257 505 IPT 507 (530)
Q Consensus 505 ip~ 507 (530)
.+.
T Consensus 84 r~~ 86 (166)
T 1w9e_A 84 RDR 86 (166)
T ss_dssp ECC
T ss_pred EcC
Confidence 544
No 343
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=1.3e-07 Score=82.76 Aligned_cols=77 Identities=18% Similarity=0.348 Sum_probs=62.0
Q ss_pred eeeEEeccCCCC--ccceeecc-------Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEE
Q psy9257 431 ERTVTLHRDSSG--HFGFHFNK-------GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVL 500 (530)
Q Consensus 431 e~tVtL~kd~~g--~LGfs~~~-------Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tV 500 (530)
.+.+.|.+.... .|||.+.. |. |..|.++++|+++||+.||+|++|||++|.+++.+++..+++. ..+
T Consensus 16 ~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~~v 93 (114)
T 2d8i_A 16 TQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--PSL 93 (114)
T ss_dssp EEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS--SEE
T ss_pred eEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC--CcE
Confidence 456677666553 58888752 22 8899999999999999999999999999999887788888874 489
Q ss_pred EEEEEeCcc
Q psy9257 501 TLTLIPTSM 509 (530)
Q Consensus 501 tLtVip~~~ 509 (530)
.|+|.|...
T Consensus 94 ~l~v~R~p~ 102 (114)
T 2d8i_A 94 GLLVRTYPE 102 (114)
T ss_dssp EEEEEECCC
T ss_pred EEEEEECCC
Confidence 999987653
No 344
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.51 E-value=1.9e-07 Score=86.50 Aligned_cols=53 Identities=11% Similarity=0.284 Sum_probs=50.8
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEe
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIP 506 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip 506 (530)
|..|.++++|++ ||+.||+|++|||+.|.++.+.++...+++.++.+.|+|.|
T Consensus 28 V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 28 VTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp EEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred EEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 889999999999 99999999999999999999999999999988899999998
No 345
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.51 E-value=4.6e-07 Score=78.78 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=58.1
Q ss_pred EEeccCCCCccceeecc---C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh---CCCEEEEEEEe
Q psy9257 434 VTLHRDSSGHFGFHFNK---G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK---GGSVLTLTLIP 506 (530)
Q Consensus 434 VtL~kd~~g~LGfs~~~---G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr---sG~tVtLtVip 506 (530)
+.+.+.. ..+||.+.. + .|.+|.++|+|+++||+.||+|++|||+.|...+.+++...+++ +++.+.|+|..
T Consensus 21 l~l~~~~-~g~G~~l~~~~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 21 LLILPQE-EDYGFDIEEKNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp EEECCCS-SSSSEEEEEETTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCC-CcccEEEEccCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 3344433 347888753 2 38899999999999999999999999999976666889888875 68999999875
Q ss_pred C
Q psy9257 507 T 507 (530)
Q Consensus 507 ~ 507 (530)
+
T Consensus 100 ~ 100 (101)
T 3qik_A 100 K 100 (101)
T ss_dssp C
T ss_pred C
Confidence 3
No 346
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.51 E-value=1.4e-07 Score=82.81 Aligned_cols=59 Identities=25% Similarity=0.347 Sum_probs=52.7
Q ss_pred EEEEcc--CCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcchh
Q psy9257 453 IVSLVK--DSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSMYQ 511 (530)
Q Consensus 453 V~sVv~--gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~~e 511 (530)
|..|.+ +++|+++||+.||+|++|||+.|.++..+++..+|+..++.+.|+|.|....+
T Consensus 48 V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 48 VKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQ 108 (118)
T ss_dssp EEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCC
T ss_pred EEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEE
Confidence 778888 99999999999999999999999999888899999876889999998876443
No 347
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.50 E-value=1.1e-07 Score=83.34 Aligned_cols=81 Identities=22% Similarity=0.310 Sum_probs=67.1
Q ss_pred ceeeEEeccCCCCccceeecc-----Cc-EEEEccCCHHHHcCC-CCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEE
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK-----GQ-IVSLVKDSSAARNGL-LVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLT 501 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~-----Gv-V~sVv~gSpAarAGL-r~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVt 501 (530)
+.+++.+.+.....|||.+.. +. |..|.++++|+++|| +.||+|++|||+.+.+++.+++..+++. .++.+.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 87 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 87 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEE
T ss_pred ceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 456677777766679998863 22 888999999999998 9999999999999999888899998885 468999
Q ss_pred EEEEeCcch
Q psy9257 502 LTLIPTSMY 510 (530)
Q Consensus 502 LtVip~~~~ 510 (530)
|+|.|....
T Consensus 88 l~v~R~g~~ 96 (127)
T 1b8q_A 88 VLILRGPEG 96 (127)
T ss_dssp EEEECCCCS
T ss_pred EEEEeCCce
Confidence 999887643
No 348
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.40 E-value=7.8e-07 Score=95.33 Aligned_cols=75 Identities=21% Similarity=0.368 Sum_probs=65.4
Q ss_pred eeEEeccCCCCccceeecc----Cc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEE
Q psy9257 432 RTVTLHRDSSGHFGFHFNK----GQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTL 504 (530)
Q Consensus 432 ~tVtL~kd~~g~LGfs~~~----Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtV 504 (530)
+.|.+.+. ..|||.+.+ |. |..|.++|+|+++||+.||+|++|||+.|.+++.+++..+|++ .|+.++|+|
T Consensus 3 r~V~l~k~--~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V 80 (468)
T 3shw_A 3 KLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILA 80 (468)
T ss_dssp EEEEEECC--SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEE
T ss_pred eEEEEecC--CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEE
Confidence 45666665 569999854 33 8999999999999999999999999999999999999999987 889999999
Q ss_pred EeCc
Q psy9257 505 IPTS 508 (530)
Q Consensus 505 ip~~ 508 (530)
.+..
T Consensus 81 ~r~g 84 (468)
T 3shw_A 81 QKKK 84 (468)
T ss_dssp EECH
T ss_pred EECC
Confidence 9875
No 349
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.37 E-value=9e-07 Score=93.24 Aligned_cols=69 Identities=25% Similarity=0.318 Sum_probs=60.2
Q ss_pred CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceeeEEeccCC
Q psy9257 369 EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERTVTLHRDS 440 (530)
Q Consensus 369 ~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~tVtL~kd~ 440 (530)
.|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +.++++.. +..+.|+|.|+++++.+++.+..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~--~~~~l~~~-~~~v~l~v~R~g~~~~~~~~~~~ 431 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAE--MRKVLAAK-PAIIALQIVRGNESIYLLMRLEH 431 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHhC-CCeEEEEEEECCEEEEEEEEecc
Confidence 58999999999999999999999999999999998754 77888764 45899999999998888877654
No 350
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.37 E-value=4.9e-07 Score=92.71 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=56.2
Q ss_pred cceeeccCc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEeCcchhhhh
Q psy9257 444 FGFHFNKGQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIPTSMYQHMM 514 (530)
Q Consensus 444 LGfs~~~Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip~~~~e~m~ 514 (530)
+|+....|. |.+|.++|+|+++||+.||+|++|||+.|.++ .++...+.. .|+.++|+|.|......+.
T Consensus 257 ~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 328 (345)
T 3stj_A 257 FNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKPLEVE 328 (345)
T ss_dssp TTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCH--HHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred cCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 454444454 88999999999999999999999999999977 578887764 6899999999987554443
No 351
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.34 E-value=1.5e-06 Score=90.79 Aligned_cols=76 Identities=21% Similarity=0.356 Sum_probs=64.3
Q ss_pred eeeEEeccCCCCccceeeccC----c-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEE
Q psy9257 431 ERTVTLHRDSSGHFGFHFNKG----Q-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLT 503 (530)
Q Consensus 431 e~tVtL~kd~~g~LGfs~~~G----v-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLt 503 (530)
.+.+.+.+.. .|||.+.+| . |..|.++|+|+++||+.||+|++|||+.+.+++.+++..+|++ .|+.++|+
T Consensus 10 ~~~v~~~k~~--~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~ 87 (391)
T 3tsz_A 10 MKLVKFRKGD--SVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 87 (391)
T ss_dssp EEEEEEECCS--SCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE
T ss_pred cEEEEeecCC--ceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEE
Confidence 3445555543 499998753 3 8999999999999999999999999999999999999999984 88999999
Q ss_pred EEeCc
Q psy9257 504 LIPTS 508 (530)
Q Consensus 504 Vip~~ 508 (530)
|.+..
T Consensus 88 v~r~~ 92 (391)
T 3tsz_A 88 AQKKK 92 (391)
T ss_dssp EEECH
T ss_pred EeeCC
Confidence 99875
No 352
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=9.6e-07 Score=77.28 Aligned_cols=65 Identities=20% Similarity=0.347 Sum_probs=54.5
Q ss_pred Cccceeecc--------Cc-EEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEEEEeCc
Q psy9257 442 GHFGFHFNK--------GQ-IVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLTLIPTS 508 (530)
Q Consensus 442 g~LGfs~~~--------Gv-V~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLtVip~~ 508 (530)
..|||.+.. |. |..|.++++|+++| |+.||+|++|||+.|.++ +++..+|+. .++.+.|+|.|..
T Consensus 32 ~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 32 DKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNR--EEAVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp CCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSH--HHHHHHHTCSSCCSCCEEEEECS
T ss_pred CcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCEEEEEEEECC
Confidence 458888752 33 88999999999999 999999999999999864 678888875 4788999998875
No 353
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.26 E-value=2.7e-06 Score=96.52 Aligned_cols=82 Identities=22% Similarity=0.212 Sum_probs=69.8
Q ss_pred ccCCCeeEEEEEecCCcEEEEEeccC--------CHhhhcC--CCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEE
Q psy9257 354 KDASGLIGLRVCAINEGVFVCLVERG--------SPASLVG--LRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRV 423 (530)
Q Consensus 354 K~s~G~LG~~V~~~~~GV~Vs~V~pG--------SPAakAG--Lq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtL 423 (530)
....+++|+.+...+.+++|..|.+| |||+++| |+ ||+|++|||+.+.++.+ +..+++...|..|.|
T Consensus 733 ~~~~~g~G~~~~~~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~--~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 733 PFRSGRIACDFKLDGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSN--IYRVLSEKAGTSARI 809 (1045)
T ss_dssp CCCCCBCSEEEEEETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBC--HHHHHHTTTTSEEEE
T ss_pred ccccceecEEEEEeCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhh--HHHhhcCCCCCEEEE
Confidence 34556899999888889999999998 9999999 99 99999999999999874 678888888999999
Q ss_pred EEecCC-ceeeEEecc
Q psy9257 424 VIRDRP-LERTVTLHR 438 (530)
Q Consensus 424 tVrR~~-~e~tVtL~k 438 (530)
+|.|++ +.++++|.+
T Consensus 810 ~v~r~~~~~~~~~~~~ 825 (1045)
T 1k32_A 810 RLSGKGGDKRDLMIDI 825 (1045)
T ss_dssp EEECSSSCEEEEEEEC
T ss_pred EEECCCCceEEEEEEE
Confidence 999976 455666653
No 354
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.25 E-value=8.9e-07 Score=93.09 Aligned_cols=68 Identities=18% Similarity=0.340 Sum_probs=55.4
Q ss_pred eeEEEEEecCC-----cEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCc
Q psy9257 359 LIGLRVCAINE-----GVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPL 430 (530)
Q Consensus 359 ~LG~~V~~~~~-----GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~ 430 (530)
++||.+..... .++|..|.+||||++|||+.||+|++|||+.|.++. +..+++. .+..|+|+|.|+++
T Consensus 75 G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~-~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 75 GFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQG-STRQLQIGVYKEVV 147 (403)
T ss_dssp SEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSC-SCEEEEEEEEEEEC
T ss_pred ceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhC-CCCEEEEEEEeCCc
Confidence 37777665332 378999999999999999999999999999999985 4556655 78899999988654
No 355
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.21 E-value=1.6e-06 Score=92.01 Aligned_cols=65 Identities=23% Similarity=0.246 Sum_probs=57.1
Q ss_pred CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceeeEEe
Q psy9257 369 EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERTVTL 436 (530)
Q Consensus 369 ~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~tVtL 436 (530)
.|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +.++++. .+..+.|+|.|+++.+.+.|
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~--~~~~l~~-~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKS--LQTIAQE-KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHTTS-SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHhc-CCCeEEEEEEECCEEEEEEe
Confidence 58999999999999999999999999999999998744 7777766 57889999999988877765
No 356
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.13 E-value=2.2e-06 Score=89.12 Aligned_cols=80 Identities=19% Similarity=0.366 Sum_probs=65.8
Q ss_pred ceeeEEeccCCCCccceeecc---C------cEEEEccCCHHHHcC-CCCCCEEEEEcCeecCCCChHHHHHHHHh--CC
Q psy9257 430 LERTVTLHRDSSGHFGFHFNK---G------QIVSLVKDSSAARNG-LLVNHNILEVNGANVVGLKDKELLEAMEK--GG 497 (530)
Q Consensus 430 ~e~tVtL~kd~~g~LGfs~~~---G------vV~sVv~gSpAarAG-Lr~GDrILeVNGq~V~gls~eeVv~iLkr--sG 497 (530)
..+++.+.+...+.|||.+.+ | .|..|.++|+|+++| |+.||+|++|||+++.++++.++..+++. .+
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 283 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQ 283 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTC
T ss_pred cceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCC
Confidence 446777777766678998753 2 388999999999999 99999999999999999988888888875 45
Q ss_pred CEEEEEEEeCcc
Q psy9257 498 SVLTLTLIPTSM 509 (530)
Q Consensus 498 ~tVtLtVip~~~ 509 (530)
..++|+|.+...
T Consensus 284 ~~v~l~v~r~~~ 295 (388)
T 3suz_A 284 TQVKLNIVSCPP 295 (388)
T ss_dssp SCEEEEEEECCS
T ss_pred Cccccccccccc
Confidence 669999987653
No 357
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.13 E-value=6.2e-06 Score=69.32 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=48.2
Q ss_pred cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEeCcc
Q psy9257 452 QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIPTSM 509 (530)
Q Consensus 452 vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip~~~ 509 (530)
.|..|.++|+|+++||+.||+|++|||+.|.++ +++...+.. .++.+.|+|.|...
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECCC
Confidence 588999999999999999999999999999988 467777753 34789999998763
No 358
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.04 E-value=5.5e-06 Score=73.82 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=47.9
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEeCcch
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIPTSMY 510 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip~~~~ 510 (530)
|..|.++|+|+ +||+.||+|++|||+.+.++ .++...+.. .|+.++|+|.|....
T Consensus 61 V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 61 VRSVQSNMPAN-GHLEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp EEECSTTSGGG-TTSCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred EEEECCCCchH-HCCCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 88999999999 99999999999999999987 467777764 588999999987644
No 359
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.03 E-value=7.6e-06 Score=69.09 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=48.1
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEeCcchh
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIPTSMYQ 511 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip~~~~e 511 (530)
|..|.++++|++ ||+.||+|++|||+.+.++ +++...+.. .|+.+.|+|.|.....
T Consensus 11 V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 68 (100)
T 3i18_A 11 VMSVKDDVPAAD-VLHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGDKNE 68 (100)
T ss_dssp EEEECTTSGGGG-TCCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred EEEeCCCCchHH-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 889999999996 9999999999999999987 568887874 5789999999876443
No 360
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.02 E-value=7.5e-06 Score=67.11 Aligned_cols=57 Identities=18% Similarity=0.268 Sum_probs=48.1
Q ss_pred cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh-CCCEEEEEEEeCcch
Q psy9257 452 QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK-GGSVLTLTLIPTSMY 510 (530)
Q Consensus 452 vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr-sG~tVtLtVip~~~~ 510 (530)
.|..|.++++|+++||+.||+|++|||+.+.++ +++...+.. .++.+.|+|.|....
T Consensus 7 ~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 7 VLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp BCSEECTTSHHHHTTCCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred EEEEECCCChHHhcCCCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECCeE
Confidence 377899999999999999999999999999987 567777764 467899999887643
No 361
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.00 E-value=5.7e-06 Score=68.03 Aligned_cols=55 Identities=11% Similarity=0.072 Sum_probs=44.6
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCcc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTSM 509 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~~ 509 (530)
|..+.++++|+++||+.||+|++|||+.|.++ +++..+++ +.++.++|+|.|...
T Consensus 23 V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 23 VSPGKDPVLFESIGLQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEECSCHHHHHHTTCCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEeCCCCCHHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 45555666779999999999999999999988 46777776 357899999988753
No 362
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.99 E-value=8.7e-06 Score=69.58 Aligned_cols=55 Identities=24% Similarity=0.259 Sum_probs=48.0
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcch
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSMY 510 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~~ 510 (530)
|..|.++|+|+++||+.||+|++|||+.+.++ +++...++. ++.+.|+|.|....
T Consensus 39 V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~-~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 39 IHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRT-QSQLAVQIRRGRET 93 (113)
T ss_dssp EEEEBTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHH-CSSEEEEEEETTEE
T ss_pred EEEeCCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhC-CCeEEEEEEECCEE
Confidence 88999999999999999999999999999865 577777776 68899999887643
No 363
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.94 E-value=2.2e-06 Score=71.88 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=47.5
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEeCcch
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIPTSMY 510 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip~~~~ 510 (530)
|..|.++|+|++ ||+.||+|++|||+++.++ .++..+++. .|+.++|+|.|....
T Consensus 5 V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 5 ASSVVENMPAKG-KIEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CCCCCCSSCCSS-CCCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred EEEECCCChHHH-cCCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 678899999999 9999999999999999877 578888875 488999999987644
No 364
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.91 E-value=1.4e-06 Score=92.27 Aligned_cols=74 Identities=26% Similarity=0.416 Sum_probs=0.0
Q ss_pred eEEEEEe--cCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEecCCceeeEEe
Q psy9257 360 IGLRVCA--INEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRDRPLERTVTL 436 (530)
Q Consensus 360 LG~~V~~--~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR~~~e~tVtL 436 (530)
+|+.+.. ...|++|..|.++|+|+++||+.||+|++|||+.+.++.+ +.++++...+ .+.|+|.|+++.+.+.|
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~--l~~~l~~~~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAE--LRKVLDSKPS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHcCCC-eEEEEEEECCEEEEEEe
Confidence 4666642 2368999999999999999999999999999999998765 6777766544 78899999887766654
No 365
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.89 E-value=4.2e-05 Score=77.98 Aligned_cols=62 Identities=21% Similarity=0.343 Sum_probs=52.1
Q ss_pred cCc-EEEEccCCHHHHcCCCC-----------CCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCcchhhh
Q psy9257 450 KGQ-IVSLVKDSSAARNGLLV-----------NHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTSMYQHM 513 (530)
Q Consensus 450 ~Gv-V~sVv~gSpAarAGLr~-----------GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~~~e~m 513 (530)
.|. |..|.++++|+++||+. ||+|++|||++|.++ +++...|. +.|++++|+|.|......+
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 326 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKEKI 326 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEEEE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEEEE
Confidence 354 88999999999999999 999999999999988 57888775 3578999999988654433
No 366
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.87 E-value=1.9e-05 Score=67.19 Aligned_cols=55 Identities=11% Similarity=0.072 Sum_probs=44.3
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCcc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTSM 509 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~~ 509 (530)
|....+.++|+++||+.||+|++|||+.|.++. ++..++. +.++.+.|+|.|...
T Consensus 41 V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 41 VSPGKDPVLFESIGLQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEECSCTHHHHHHTCCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EecCCCCCHHHHcCCCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECCE
Confidence 444555667799999999999999999999995 4666665 467899999988753
No 367
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.84 E-value=1.7e-05 Score=67.80 Aligned_cols=54 Identities=28% Similarity=0.314 Sum_probs=46.4
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~ 509 (530)
|..|.++++|+++||+.||+|++|||+.+.++ .++...++ .++.+.|+|.|...
T Consensus 39 V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~-~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 39 VQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVL-TESPLLLEVRRGND 92 (112)
T ss_dssp EEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHH-HCSSEEEEEEETTE
T ss_pred EEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHh-CCCeEEEEEEECCE
Confidence 78899999999999999999999999999876 56777774 46788999988753
No 368
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.81 E-value=2.2e-05 Score=78.96 Aligned_cols=68 Identities=21% Similarity=0.325 Sum_probs=55.6
Q ss_pred CCccceeeccCc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCcch
Q psy9257 441 SGHFGFHFNKGQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTSMY 510 (530)
Q Consensus 441 ~g~LGfs~~~Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~~~ 510 (530)
...+|+....|. |..|.++++|+++||+.||+|++|||+++.++ +++...++ +.|+.++|+|.|....
T Consensus 235 ~~~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 235 AQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp SSSSCSSSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred HHhccCCCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 344565544554 88999999999999999999999999999887 57888787 4688999999987643
No 369
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.81 E-value=7.4e-06 Score=68.63 Aligned_cols=56 Identities=16% Similarity=0.304 Sum_probs=47.7
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEeCcchh
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIPTSMYQ 511 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip~~~~e 511 (530)
|..|.++|+|++ ||+.||+|++|||+++.++ .++..+++. .|+.++|+|.|.....
T Consensus 9 V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 66 (94)
T 2kl1_A 9 VMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDRKQH 66 (94)
T ss_dssp CCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETTEEE
T ss_pred EEEECCCChHHh-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 667889999999 9999999999999999876 577777775 5889999999876443
No 370
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.73 E-value=8.5e-05 Score=76.83 Aligned_cols=68 Identities=16% Similarity=0.299 Sum_probs=56.1
Q ss_pred Cccceeec------cCc-EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH-hCCCEEEEEEEeCcc
Q psy9257 442 GHFGFHFN------KGQ-IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME-KGGSVLTLTLIPTSM 509 (530)
Q Consensus 442 g~LGfs~~------~Gv-V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk-rsG~tVtLtVip~~~ 509 (530)
..+|+.+. ++. |..|.++++|+++||+.||+|++|||+++.++..+++..+++ ..|..++|+|.|...
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 34777764 222 889999999999999999999999999999997777887776 467889999987654
No 371
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.73 E-value=3.4e-05 Score=77.52 Aligned_cols=56 Identities=21% Similarity=0.290 Sum_probs=48.8
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHh--CCCEEEEEEEe-Ccch
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEK--GGSVLTLTLIP-TSMY 510 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkr--sG~tVtLtVip-~~~~ 510 (530)
|..|.++++|+++||+.||+|++|||+.+.++ .++...+.+ .|+.++|+|.| ....
T Consensus 246 V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 246 IVEVVAGGAAANAGVPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp EEEECTTSTTTTTTCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred EEEECCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 88999999999999999999999999999987 567777764 58899999998 6543
No 372
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.48 E-value=9.5e-05 Score=74.70 Aligned_cols=55 Identities=24% Similarity=0.259 Sum_probs=48.4
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcch
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSMY 510 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~~ 510 (530)
|.+|.++++|+++||+.||+|++|||+.+.++ +++...++. ++.+.|+|.|....
T Consensus 260 V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~--~~l~~~l~~-~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 260 IHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRT-QSQLAVQIRRGRET 314 (325)
T ss_dssp EEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHTT-CSSEEEEEEETTEE
T ss_pred EEEeCcCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHhC-CCeEEEEEEECCEE
Confidence 88999999999999999999999999999877 578777766 68899999987643
No 373
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.48 E-value=0.00015 Score=79.73 Aligned_cols=69 Identities=17% Similarity=0.332 Sum_probs=55.4
Q ss_pred CCccceeecc---C-cEEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCcchhh
Q psy9257 441 SGHFGFHFNK---G-QIVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTSMYQH 512 (530)
Q Consensus 441 ~g~LGfs~~~---G-vV~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~~~e~ 512 (530)
...+|+.+.. | .|..|..+|+|+++||+.||+|++|||+.|. . +++..+++ +.|+.|+|+|.|......
T Consensus 484 ~~~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~-~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 558 (597)
T 4fgm_A 484 RVNFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQAT-E--QSVKRILERYIPGDTVTIHAFRRDELMT 558 (597)
T ss_dssp SCCCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC-T--TTHHHHHTTCCTTCEEEEEEEETTEEEE
T ss_pred ccccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECC-H--HHHHHHHHhcCCCCEEEEEEEECCEEEE
Confidence 3468888752 3 3889999999999999999999999999994 3 45777776 468899999998765443
No 374
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.47 E-value=0.00016 Score=64.14 Aligned_cols=53 Identities=26% Similarity=0.292 Sum_probs=45.8
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHH--hCCCEEEEEEEeCcc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAME--KGGSVLTLTLIPTSM 509 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLk--rsG~tVtLtVip~~~ 509 (530)
|..|.++++|+++ |+.||+|++|||+.|.++ +++...++ +.++.+.|+| |...
T Consensus 29 V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 29 IDSVVPGSPASKV-LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp EEEECSSSGGGGT-SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred EEEECCCChHHHh-cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 7889999999999 999999999999999987 56777776 4578999999 7654
No 375
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.16 E-value=0.00024 Score=74.64 Aligned_cols=54 Identities=22% Similarity=0.244 Sum_probs=46.8
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~ 509 (530)
|..|.++|||+++||+.||+|++|||+.|.++. +..+++..|..++|++.|...
T Consensus 94 V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 94 ISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred EEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 889999999999999999999999999999884 555555578889999987654
No 376
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.05 E-value=8.9e-05 Score=74.91 Aligned_cols=54 Identities=24% Similarity=0.455 Sum_probs=0.0
Q ss_pred EEEEccCCHHHHcCCCCCCEEEEEcCeecCCCChHHHHHHHHhCCCEEEEEEEeCcc
Q psy9257 453 IVSLVKDSSAARNGLLVNHNILEVNGANVVGLKDKELLEAMEKGGSVLTLTLIPTSM 509 (530)
Q Consensus 453 V~sVv~gSpAarAGLr~GDrILeVNGq~V~gls~eeVv~iLkrsG~tVtLtVip~~~ 509 (530)
|..|.++++|+++||+.||+|++|||+.+.++. ++...++. ++.++|+|.|...
T Consensus 258 V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~-~~~v~l~v~R~g~ 311 (332)
T 3num_A 258 IIEVIPDTPAEAGGLKENDVIISINGQSVVSAN--DVSDVIKR-ESTLNMVVRRGNE 311 (332)
T ss_dssp ---------------------------------------------------------
T ss_pred EEEeccCCChHHcCCCCCCEEEEECCEECCCHH--HHHHHHhC-CCeEEEEEEECCE
Confidence 889999999999999999999999999998773 56666654 6678888877653
No 377
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.59 E-value=0.0025 Score=69.53 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=50.7
Q ss_pred CcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCcCHHHHHHHHHhCCCCeEEEEEec
Q psy9257 369 EGVFVCLVERGSPASLVGLRFGDQILSINGETVAGYNMKQVHKILKAAPVNNIRVVIRD 427 (530)
Q Consensus 369 ~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~s~~~v~~LLk~a~G~~VtLtVrR 427 (530)
.||+|..|.++++|+.+|++.||+|++|||+.|.++.+ +.+++++++++.+.|.+.+
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~--l~~~l~~~k~~~l~~~~~~ 471 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHH--LAHLIDMCKDKYLVFEFED 471 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHH--HHHHHHTCCSSEEEEEETT
T ss_pred eEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHH--HHHHHHHcCCCeEEEEECC
Confidence 47999999999999999999999999999999999766 8999999888877776544
No 378
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.50 E-value=0.0048 Score=70.02 Aligned_cols=64 Identities=16% Similarity=0.223 Sum_probs=51.6
Q ss_pred Cccceeec--c-C-cEEEEccC--------CHHHHcC--CCCCCEEEEEcCeecCCCChHHHHHHHH-hCCCEEEEEEEe
Q psy9257 442 GHFGFHFN--K-G-QIVSLVKD--------SSAARNG--LLVNHNILEVNGANVVGLKDKELLEAME-KGGSVLTLTLIP 506 (530)
Q Consensus 442 g~LGfs~~--~-G-vV~sVv~g--------SpAarAG--Lr~GDrILeVNGq~V~gls~eeVv~iLk-rsG~tVtLtVip 506 (530)
+.+|+.+. + + .|..|.++ ++|+++| |+ ||+|++|||+.+.++. ++..+|+ +.|..++|+|.|
T Consensus 737 ~g~G~~~~~~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r 813 (1045)
T 1k32_A 737 GRIACDFKLDGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSG 813 (1045)
T ss_dssp CBCSEEEEEETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEEC
T ss_pred ceecEEEEEeCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEEC
Confidence 35777764 2 2 38889887 9999999 99 9999999999999986 4666665 668899999988
Q ss_pred Cc
Q psy9257 507 TS 508 (530)
Q Consensus 507 ~~ 508 (530)
..
T Consensus 814 ~~ 815 (1045)
T 1k32_A 814 KG 815 (1045)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 379
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=87.18 E-value=0.04 Score=53.39 Aligned_cols=66 Identities=17% Similarity=0.110 Sum_probs=40.4
Q ss_pred hHHHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEE-----EeccCCCeeEE
Q psy9257 292 SELINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELV-----LCKDASGLIGL 362 (530)
Q Consensus 292 ed~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~-----L~K~s~G~LG~ 362 (530)
++.|+ +++++++|++++++++..|+..++...... +|+..|++||++.+.++.+. -++..++|||+
T Consensus 169 ~~~i~----tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r~~lGv 239 (239)
T 1l1j_A 169 VGLIQ----TDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTILTQKKVEKAYLGV 239 (239)
T ss_dssp EEEEE----ESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred CCEEE----ECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHHHCCCCccceeCc
Confidence 34566 789999999999998877777777554444 56678999999766655433 24566888885
No 380
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=76.41 E-value=0.11 Score=50.60 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=38.0
Q ss_pred hHHHHHHHHhhcccccccccccccccCCCCCCCCceeecCCCCccceechhcccccceEE
Q psy9257 292 SELINAYARENAANERESDAAGNTVARQAPRDSCTMIAPLSSSGSGLKKAYVTNGIRELV 351 (530)
Q Consensus 292 ed~Iqa~~~~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG~svGIgfAi~~~~Vr~V~ 351 (530)
++.|+ +++++++|++++++++..|+..++......-+|+..|++||++.+.++.+.
T Consensus 173 ~~~i~----tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~ 228 (245)
T 3sti_A 173 ENFIQ----TDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLA 228 (245)
T ss_dssp SSCEE----ESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHH
T ss_pred cCEEE----EcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHH
Confidence 34466 788999999988888878888888665555466778899998776666543
No 381
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=48.45 E-value=17 Score=40.06 Aligned_cols=43 Identities=19% Similarity=0.333 Sum_probs=31.9
Q ss_pred CeeEEEEE-ecCCcEEEEEeccCCHhhhcCCCCCCEEEEECCEEcCCc
Q psy9257 358 GLIGLRVC-AINEGVFVCLVERGSPASLVGLRFGDQILSINGETVAGY 404 (530)
Q Consensus 358 G~LG~~V~-~~~~GV~Vs~V~pGSPAakAGLq~GDqILaING~~V~g~ 404 (530)
.++||.+. ..+..++|..+..... ++..||+|++|||..+..+
T Consensus 84 a~~Pf~vki~iDG~i~V~dv~~~~s----~I~vGdEIlsING~pv~e~ 127 (583)
T 3dor_A 84 AYLPYTVQKSSDGRFYFVDIMTFSS----EIRVGDELLEVDGAPVQDV 127 (583)
T ss_dssp EECSEEEEECTTSCEEEEEECSSCC----SSCTTCEEEEETTEEHHHH
T ss_pred ccCCeEEEEEECCcEEEEecccccc----CCCCCCEEEEECCccHHHH
Confidence 36778777 5666688876643322 7999999999999998654
No 382
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=21.97 E-value=11 Score=35.78 Aligned_cols=49 Identities=10% Similarity=-0.049 Sum_probs=26.3
Q ss_pred hhcccccccccccccccCCCCCCCCceeecCCC---Cccceechhcccccce
Q psy9257 301 ENAANERESDAAGNTVARQAPRDSCTMIAPLSS---SGSGLKKAYVTNGIRE 349 (530)
Q Consensus 301 ~~~ai~p~~~~~~av~~~~~~~~s~gilapvSG---~svGIgfAi~~~~Vr~ 349 (530)
+++.+.+|++++++++..|+..++......-++ ...|++||++.+.++.
T Consensus 167 ~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~ 218 (237)
T 3lgi_A 167 TDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATK 218 (237)
T ss_dssp ECSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHH
T ss_pred EcCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHH
Confidence 567777777766666655555554322211111 3456666665554444
Done!