Query psy9258
Match_columns 163
No_of_seqs 106 out of 436
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 22:51:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xbr_A Protein (T protein); co 100.0 9.5E-66 3.3E-70 398.7 12.4 152 1-162 22-175 (184)
2 2x6u_A T-box transcription fac 100.0 6.5E-66 2.2E-70 405.0 11.4 158 1-162 26-186 (203)
3 1h6f_A T-box transcription fac 100.0 1.8E-65 6.3E-70 399.9 10.4 156 1-162 25-183 (193)
4 4a04_A T-box transcription fac 100.0 1.2E-64 4.2E-69 398.0 11.8 158 1-162 36-199 (203)
5 1j8k_A Fibronectin; EDA, TYPEI 73.2 2.9 9.9E-05 26.5 3.1 24 12-35 53-76 (94)
6 2dkm_A Collagen alpha-1(XX) ch 72.9 3.9 0.00013 26.7 3.7 21 15-35 62-82 (104)
7 3qht_C Monobody YSMB-1; fibron 71.9 2.7 9.4E-05 27.0 2.7 23 13-35 57-79 (97)
8 3t04_D Monobody 7C12; engineer 71.6 3.2 0.00011 27.2 3.0 22 13-34 63-84 (103)
9 3tes_A Tencon; fibronectin typ 71.0 2.9 0.0001 27.1 2.7 23 13-35 54-76 (98)
10 3k2m_C Monobody HA4; engineere 70.9 4.5 0.00016 26.2 3.7 25 13-37 59-83 (101)
11 3b83_A Ten-D3; beta sheet, com 70.8 3.1 0.00011 27.0 2.8 24 12-35 53-76 (100)
12 2rb8_A Tenascin; beta sheet,lo 70.7 3 0.0001 27.3 2.7 23 13-35 55-77 (104)
13 2edd_A Netrin receptor DCC; tu 70.6 3.2 0.00011 28.2 3.0 22 13-34 77-98 (123)
14 2djs_A Ephrin type-B receptor 70.3 3.6 0.00012 26.6 3.1 23 13-35 62-84 (108)
15 1x5j_A Neogenin; RGM binding, 70.0 2.6 8.9E-05 28.2 2.3 23 13-35 67-89 (113)
16 3teu_A Fibcon; FN3 domain, fib 69.8 3.3 0.00011 26.5 2.7 23 13-35 54-76 (98)
17 2cuh_A Tenascin-X; fibronectin 69.5 3.2 0.00011 27.6 2.7 23 13-35 58-80 (115)
18 2cui_A Tenascin-X; fibronectin 69.2 3.3 0.00011 28.1 2.7 22 14-35 70-91 (112)
19 1x4y_A Biregional cell adhesio 69.0 3.8 0.00013 26.9 3.0 23 13-35 68-90 (114)
20 2dn7_A Receptor-type tyrosine- 68.8 3.8 0.00013 26.3 2.9 23 13-35 61-83 (107)
21 2e7h_A Ephrin type-B receptor 68.5 4.5 0.00015 26.3 3.3 23 13-35 63-85 (109)
22 1x5z_A Receptor-type tyrosine- 67.0 3.7 0.00013 26.7 2.6 24 12-35 68-91 (115)
23 2cum_A Tenascin-X; hexabrachio 66.3 5.2 0.00018 26.1 3.2 23 13-35 58-80 (105)
24 1uen_A KIAA0343 protein; immun 66.2 4.9 0.00017 26.5 3.2 23 13-35 79-101 (125)
25 1x4x_A Fibronectin type-III do 66.2 5.1 0.00017 26.0 3.2 24 12-35 59-82 (106)
26 1va9_A DOWN syndrome cell adhe 65.8 5.2 0.00018 26.1 3.2 23 13-35 77-99 (122)
27 2h41_A Fibronectin; beta sandw 65.7 3.9 0.00013 27.1 2.5 23 13-35 58-80 (95)
28 2edb_A Netrin receptor DCC; tu 65.4 5.1 0.00017 26.7 3.1 23 13-35 70-92 (116)
29 3qwq_B Adnectin; cell surface 65.3 4.4 0.00015 27.3 2.7 24 13-36 56-79 (114)
30 2ee2_A Contactin-1; neural cel 64.3 5 0.00017 26.4 2.9 23 13-35 73-95 (119)
31 1x5a_A Ephrin type-A receptor 64.3 4.7 0.00016 26.5 2.7 20 16-35 64-83 (107)
32 2ed8_A Netrin receptor DCC; tu 64.2 4.9 0.00017 25.8 2.8 23 13-35 60-82 (106)
33 2ocf_D Fibronectin; estrogen r 64.0 4.7 0.00016 27.4 2.7 23 13-35 81-103 (121)
34 1x5x_A Fibronectin type-III do 63.9 5.9 0.0002 25.6 3.2 22 13-34 63-84 (109)
35 2dle_A Receptor-type tyrosine- 63.8 4.6 0.00016 26.9 2.6 22 13-34 58-79 (104)
36 2yrz_A Integrin beta-4; GP150, 63.6 5.8 0.0002 25.9 3.1 23 13-35 72-94 (118)
37 2haz_A N-CAM 1, neural cell ad 63.2 5.2 0.00018 25.9 2.7 23 13-35 65-87 (105)
38 2dju_A Receptor-type tyrosine- 63.1 5.8 0.0002 25.2 3.0 23 12-34 59-81 (106)
39 1x5g_A Neogenin; RGM binding, 63.0 5.2 0.00018 26.0 2.7 23 13-35 70-92 (116)
40 1x5f_A Neogenin; RGM binding, 62.9 5.5 0.00019 26.1 2.9 23 13-35 74-96 (120)
41 2dmk_A Midline 2 isoform 2; mi 62.9 7.4 0.00025 26.3 3.6 24 12-35 78-101 (127)
42 2db8_A Tripartite motif protei 62.3 8.1 0.00028 25.3 3.6 23 12-34 63-85 (110)
43 1wfo_A Sidekick 2; FN3, cell a 62.0 6.2 0.00021 26.3 3.0 23 13-35 84-106 (130)
44 1wfn_A Sidekick 2; FN3, cell a 61.9 6.5 0.00022 25.8 3.1 23 13-35 73-95 (119)
45 2dm4_A Sortilin-related recept 61.2 5.8 0.0002 25.6 2.7 23 13-35 62-84 (108)
46 1uc6_A CNTF receptor, ciliary 61.0 6 0.00021 26.0 2.8 23 13-35 66-88 (109)
47 1oww_A FN, fibronectin first t 60.9 4.6 0.00016 27.4 2.1 18 15-32 62-79 (98)
48 3n1f_C Cell adhesion molecule- 60.8 6.1 0.00021 25.7 2.7 23 13-35 64-86 (102)
49 2crm_A Fibronectin type-III do 60.7 7.7 0.00026 25.5 3.3 24 12-35 73-96 (120)
50 2edx_A Protein tyrosine phosph 60.3 7.4 0.00025 25.8 3.2 24 12-35 77-100 (134)
51 1x5l_A Ephrin type-A receptor 60.1 5.5 0.00019 25.7 2.4 23 13-35 65-87 (111)
52 2ede_A Netrin receptor DCC; tu 60.0 6.6 0.00022 25.4 2.8 23 13-35 68-90 (114)
53 2ee3_A Collagen alpha-1(XX) ch 59.0 5.9 0.0002 26.5 2.4 23 13-35 59-81 (108)
54 1x5i_A Neogenin; RGM binding, 58.8 5 0.00017 27.1 2.1 23 13-35 80-102 (126)
55 2edy_A Receptor-type tyrosine- 58.3 4 0.00014 25.9 1.5 22 13-34 63-84 (103)
56 1bpv_A Titin, A71, connectin; 58.1 11 0.00037 25.1 3.7 24 12-35 66-89 (112)
57 1wf5_A Sidekick 2 protein; FNI 57.9 8.3 0.00029 25.2 3.1 24 12-35 74-97 (121)
58 2e3v_A Neural cell adhesion mo 57.6 7.9 0.00027 25.8 3.0 23 13-35 66-88 (122)
59 2ekj_A Collagen alpha-1(XX) ch 57.2 3.5 0.00012 26.9 1.0 22 13-34 60-81 (105)
60 2ed9_A Netrin receptor DCC; tu 57.0 7 0.00024 25.7 2.6 23 13-35 84-106 (124)
61 1x5h_A Neogenin; RGM binding, 56.9 6.9 0.00024 26.0 2.5 24 12-35 75-98 (132)
62 1ujt_A KIAA1568 protein; fibro 56.2 7.9 0.00027 26.4 2.8 22 13-34 74-95 (120)
63 1x5y_A Myosin binding protein 56.0 10 0.00034 24.6 3.2 23 13-35 65-87 (111)
64 2dlh_A Receptor-type tyrosine- 55.7 5.7 0.00019 25.9 1.9 24 12-35 74-97 (121)
65 1x4z_A Biregional cell adhesio 55.7 9.5 0.00032 25.1 3.1 23 13-35 75-97 (121)
66 1uem_A KIAA1568 protein; immun 54.9 9.6 0.00033 24.7 3.0 24 12-35 70-93 (117)
67 1wfu_A Unnamed protein product 54.5 13 0.00045 25.3 3.7 23 13-35 74-96 (120)
68 2yuw_A Myosin binding protein 54.5 9 0.00031 24.7 2.7 24 12-35 63-86 (110)
69 1k85_A Chitinase A1; fibronect 54.2 10 0.00035 23.5 2.9 23 13-35 50-72 (88)
70 1x3d_A Fibronectin type-III do 53.0 8.3 0.00028 25.2 2.4 24 12-35 71-94 (118)
71 2crz_A Fibronectin type-III do 52.7 7.3 0.00025 25.2 2.1 22 13-34 64-85 (110)
72 2ed7_A Netrin receptor DCC; tu 52.7 6.2 0.00021 25.7 1.7 23 13-35 73-95 (119)
73 2kbg_A N-CAM 2, neural cell ad 50.8 11 0.00038 25.5 2.8 22 13-34 63-84 (114)
74 2dbj_A Proto-oncogene tyrosine 50.5 9.3 0.00032 25.4 2.4 23 13-35 78-100 (124)
75 2ic2_A CG9211-PA, GH03927P; IH 45.6 15 0.00051 24.4 2.8 22 14-35 71-92 (115)
76 1wk0_A KIAA0970 protein; fibro 43.6 19 0.00066 25.3 3.2 22 14-35 82-103 (137)
77 3hlk_A Acyl-coenzyme A thioest 42.8 31 0.0011 28.4 4.8 41 2-42 23-64 (446)
78 3k2i_A Acyl-coenzyme A thioest 42.0 39 0.0013 27.3 5.3 41 2-42 7-48 (422)
79 2ha1_A Fibronectin; beta sandw 42.0 14 0.00049 26.2 2.4 24 13-36 55-78 (201)
80 1qr4_A Protein (tenascin); fib 41.4 19 0.00064 25.2 2.9 23 13-35 57-79 (186)
81 1cd9_B G-CSF-R, protein (G-CSF 40.4 21 0.00072 25.6 3.1 24 13-36 171-194 (215)
82 1q38_A Fibronectin; amyloid fi 40.1 9 0.00031 25.3 0.8 22 14-35 38-59 (89)
83 1bqu_A Protein (GP130); cytoki 39.7 16 0.00054 26.2 2.3 24 13-36 163-186 (215)
84 2vkw_A Neural cell adhesion mo 39.6 19 0.00065 25.7 2.7 22 14-35 165-186 (209)
85 3f7q_A Integrin beta-4, GP150; 39.0 25 0.00084 25.7 3.3 22 14-35 160-181 (234)
86 3bpo_C Interleukin-13 receptor 38.7 37 0.0013 26.1 4.5 25 12-36 265-289 (314)
87 3p4l_A Neogenin; iron homeosta 38.6 21 0.00072 25.5 2.8 23 13-35 165-187 (211)
88 3n06_B PRL-R, prolactin recept 37.7 23 0.00079 25.4 3.0 23 13-35 164-186 (210)
89 2gee_A Hypothetical protein; f 37.7 21 0.00073 25.6 2.7 23 13-35 76-98 (203)
90 1cfb_A Drosophila neuroglian; 37.0 22 0.00075 25.3 2.7 23 13-35 163-185 (205)
91 3p4l_A Neogenin; iron homeosta 36.9 23 0.0008 25.2 2.9 23 13-35 63-85 (211)
92 1wis_A KIAA1514 protein; FNIII 36.3 12 0.0004 24.9 1.0 22 13-34 78-99 (124)
93 2yux_A Myosin-binding protein 35.7 15 0.00052 24.1 1.5 21 12-32 72-92 (120)
94 3lqm_A Interleukin-10 receptor 35.7 45 0.0015 24.1 4.3 27 11-37 152-178 (201)
95 2vkw_A Neural cell adhesion mo 35.4 24 0.00083 25.1 2.7 22 14-35 68-89 (209)
96 3lpw_A A77-A78 domain from tit 34.0 33 0.0011 23.7 3.2 23 13-35 61-83 (197)
97 1tdq_A Tenascin-R; extracellul 33.2 28 0.00095 25.9 2.8 24 12-35 158-181 (283)
98 2b5i_C Cytokine receptor commo 32.6 43 0.0015 24.1 3.7 23 14-36 151-173 (199)
99 2ibg_A CG9211-PA, GH03927P; IH 31.5 31 0.0011 24.5 2.7 23 13-35 69-91 (214)
100 3f7q_A Integrin beta-4, GP150; 30.8 38 0.0013 24.6 3.2 23 13-35 57-79 (234)
101 4doh_B Interleukin-20 receptor 29.8 50 0.0017 24.2 3.7 24 13-36 159-182 (206)
102 1eer_B Epobp, erythropoietin r 29.7 33 0.0011 25.3 2.7 23 13-35 179-201 (227)
103 2jwp_A Malectin, MGC80075; sug 28.8 47 0.0016 23.9 3.3 28 9-37 61-89 (174)
104 1i1r_A GP130, interleukin-6 re 28.5 39 0.0013 25.7 3.0 24 12-35 258-281 (303)
105 1tdq_A Tenascin-R; extracellul 28.2 38 0.0013 25.1 2.9 23 13-35 67-89 (283)
106 1noa_A Neocarzinostatin; antib 28.1 46 0.0016 23.0 2.9 36 13-49 18-56 (113)
107 2mcm_A Macromomycin; apoprotei 27.9 47 0.0016 23.0 2.9 36 13-49 17-55 (112)
108 4doh_R Interleukin-20 receptor 27.1 51 0.0017 24.5 3.4 23 14-36 173-195 (221)
109 2b5i_B Interleukin-2 receptor 27.1 58 0.002 24.0 3.7 25 13-37 164-188 (214)
110 2d9q_B Granulocyte colony-stim 27.1 43 0.0015 25.6 3.0 24 13-36 265-288 (313)
111 3r8q_A Fibronectin; heparin, F 27.1 39 0.0013 25.3 2.7 23 13-35 164-186 (290)
112 1axi_B HGHBP, growth hormone r 27.0 42 0.0014 25.1 2.9 25 13-37 194-218 (236)
113 3r8q_A Fibronectin; heparin, F 26.4 40 0.0014 25.2 2.7 23 13-35 73-95 (290)
114 3s98_A Interferon alpha/beta r 26.2 41 0.0014 26.1 2.7 25 12-36 157-181 (306)
115 3t1w_A Four-domain fibronectin 25.2 43 0.0015 26.0 2.7 23 13-35 330-352 (375)
116 2erj_C Cytokine receptor commo 24.6 78 0.0027 24.0 4.0 24 13-36 188-211 (247)
117 3dlq_R Interleukin-22 receptor 24.6 57 0.0019 24.5 3.2 21 15-35 168-188 (211)
118 1v5j_A KIAA1355 protein, RSGI 24.4 26 0.00087 23.4 1.1 23 13-35 62-84 (108)
119 2gys_A Cytokine receptor commo 22.1 68 0.0023 25.8 3.4 26 12-37 375-400 (419)
120 3t1w_A Four-domain fibronectin 21.3 63 0.0022 25.0 3.0 23 13-35 58-80 (375)
121 1fnf_A Fibronectin; RGD, extra 20.7 65 0.0022 24.8 3.0 23 13-35 238-260 (368)
122 1n26_A IL-6 receptor alpha cha 20.3 67 0.0023 24.7 2.9 23 13-35 255-277 (325)
123 1je5_A Helix-destabilizing pro 20.1 69 0.0023 24.4 2.8 36 2-37 6-48 (206)
No 1
>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4
Probab=100.00 E-value=9.5e-66 Score=398.70 Aligned_cols=152 Identities=39% Similarity=0.731 Sum_probs=145.3
Q ss_pred CeEecCCCCCCCcceEEEeCCCCCCCeeEEEEEEEccCcceEecc-cccccCcCCCCCCCCCCceEEecCCCCCchhhhc
Q psy9258 1 MIITKTGRRMFPSLQLQVSGLDQAAHYSLLVEFHLASPHKYKYKT-SWEPVGDAERPIAHPAARLYSHPAGHALGSFWTG 79 (163)
Q Consensus 1 Mivtk~GR~~FP~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk~~~-~W~~~~~~~~~~~~~~~~~~~H~~~~~tG~~WM~ 79 (163)
|||||+||||||.|+|+|+||||++.|.|.|+|+++|++||||.+ +|.++|++++. .+.++++|||||++|++||+
T Consensus 22 MIiTk~GRrmFP~l~~~v~GLdp~~~Y~v~l~~~~~D~~ryk~~~~~W~~~gkae~~---~p~r~~~Hpdsp~~G~~WM~ 98 (184)
T 1xbr_A 22 MIVTKNGRRMFPVLKVSMSGLDPNAMYTVLLDFVAADNHRWKYVNGEWVPGGKPEPQ---APSCVYIHPDSPNFGAHWMK 98 (184)
T ss_dssp EECBTTCEECSSCCEEEEECSCTTSEEEEEEEEEESSSCEEEEETTEEEEESSCCCC---CCCCCEECTTCSEEHHHHHH
T ss_pred EEEecCCcccCCccEEEEeCCCcccCeEEEEEEEEccCceEEEECCcEEEcCccCCC---CCcceEECCCCchhHHHHhh
Confidence 999999999999999999999999999999999999999999999 99999999998 78899999999999999999
Q ss_pred CceeeeeeeeecCCc-cceEEecCcceeccEEEEEeCCCCCCCCCCCCCeeeEEEccccEEEEcCCCCChhhhHhhccCc
Q psy9258 80 QTLHLNKIKLANAFV-EGTILLNSMHKYIPRIHLIKNSPQPSTHWETPLSRAIFAFPITEFIAVTAYANQTVKDDACLKK 158 (163)
Q Consensus 80 ~~v~F~~~kitn~~~-~~~i~l~s~hkY~PvL~I~~~~~~~~~~~~~~~~~~~f~f~~T~FIaVT~YqN~~I~~lK~~~n 158 (163)
++|+|++|||||+.. .++|.|+|||||+|||||+++++... .+ .+|+||||+|||||+|||++|++||+++|
T Consensus 99 ~~VsF~klKlTNn~~~~~~i~L~SmHKY~PrlhI~~~~~~~~------~~-~tf~FpeT~FiAVTaYQN~~It~LKi~~N 171 (184)
T 1xbr_A 99 DPVSFSKVKLTNKMNGGGQIMLNSLHKYEPRIHIVRVGGTQR------MI-TSHSFPETQFIAVTAYQNEEITALKIKHN 171 (184)
T ss_dssp SCEECTTCEEESSCCTTTCEECCSSSEEEEEEEEEEESSSSC------CE-EEEECGGGCEEEESSCCCHHHHHHHHHHC
T ss_pred CCceeccccccccCCCCCeEEeccCceEEEEEEEEEeCCCcc------eE-EEEECCCcEEEEEeccCChhHhhhhhccC
Confidence 999999999999987 78999999999999999999877532 35 89999999999999999999999999999
Q ss_pred CCCC
Q psy9258 159 SMLS 162 (163)
Q Consensus 159 ~~~~ 162 (163)
.||.
T Consensus 172 pFAk 175 (184)
T 1xbr_A 172 PFAK 175 (184)
T ss_dssp GGGH
T ss_pred CCCc
Confidence 9994
No 2
>2x6u_A T-box transcription factor TBX5; developmental protein, DNA-binding, HOLT-ORAM-syndrome, IG-fold, nuclear protein, repressor; HET: PE4; 1.90A {Homo sapiens} PDB: 2x6v_A*
Probab=100.00 E-value=6.5e-66 Score=405.05 Aligned_cols=158 Identities=39% Similarity=0.682 Sum_probs=142.2
Q ss_pred CeEecCCCCCCCcceEEEeCCCCCCCeeEEEEEEEccCcceEecc-cccccCcCCCCCCCCCCceEEecCCCCCchhhhc
Q psy9258 1 MIITKTGRRMFPSLQLQVSGLDQAAHYSLLVEFHLASPHKYKYKT-SWEPVGDAERPIAHPAARLYSHPAGHALGSFWTG 79 (163)
Q Consensus 1 Mivtk~GR~~FP~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk~~~-~W~~~~~~~~~~~~~~~~~~~H~~~~~tG~~WM~ 79 (163)
|||||+||||||.|+|+|+||||++.|.|.|+|+++|++||||.+ +|.++|++++. .++++|+|||||++|++||+
T Consensus 26 MIiTk~GRrmFP~l~~~vsGLdp~~~Y~v~l~~~~~D~~rykf~~~~W~~~gkae~~---~p~r~y~Hpdsp~tG~~WM~ 102 (203)
T 2x6u_A 26 MIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPA---MPGRLYVHPDSPATGAHWMR 102 (203)
T ss_dssp EECBSSCEECSSCCEEEEESCCSSSEEEEEEEEEEEEEEEEEEETTEEEEEEECCCC------CCEECTTCSEEHHHHHH
T ss_pred EEEecCCcccCceeEEEEeCCCcccCeEEEEEEEEccCceeEEeCCcEeECcccCCC---CCcceEECCCCccchHHHhh
Confidence 999999999999999999999999999999999999999999999 99999999988 78899999999999999999
Q ss_pred CceeeeeeeeecCCc--cceEEecCcceeccEEEEEeCCCCCCCCCCCCCeeeEEEccccEEEEcCCCCChhhhHhhccC
Q psy9258 80 QTLHLNKIKLANAFV--EGTILLNSMHKYIPRIHLIKNSPQPSTHWETPLSRAIFAFPITEFIAVTAYANQTVKDDACLK 157 (163)
Q Consensus 80 ~~v~F~~~kitn~~~--~~~i~l~s~hkY~PvL~I~~~~~~~~~~~~~~~~~~~f~f~~T~FIaVT~YqN~~I~~lK~~~ 157 (163)
++|+|++|||||+.. .++|.|+|||||+|||||+++++......+...+ .+|+||||||||||+|||++|++||+++
T Consensus 103 ~~VsF~klKLTNn~~d~~g~I~L~SmHKYqPrlhIv~~~~~~~~~~~~~~~-~tf~FpeT~FiAVTaYQN~~It~LKi~~ 181 (203)
T 2x6u_A 103 QLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAF-CTHVFPETAFIAVTSYQNHKITQLKIEN 181 (203)
T ss_dssp SCEECTTCEEECCTTCSSCCEECCTTEEEEEEEEEEECCTTSCSSSSCCCE-EEECCGGGCEEEESSCCSHHHHHHHHHH
T ss_pred CCceeeeeeceeccCCccceEeecCCceEEEEEEEEEeCCccccCcCccce-EEEEcCCcEEEEEeeecchhhhhhhhcc
Confidence 999999999999987 6799999999999999999998765433333456 8999999999999999999999999999
Q ss_pred cCCCC
Q psy9258 158 KSMLS 162 (163)
Q Consensus 158 n~~~~ 162 (163)
|.||.
T Consensus 182 NPFAk 186 (203)
T 2x6u_A 182 NPFAK 186 (203)
T ss_dssp C----
T ss_pred CCCcc
Confidence 99995
No 3
>1h6f_A T-box transcription factor TBX3; transcription factor, TBX3, T-box transcription factor; 1.7A {Homo sapiens} SCOP: b.2.5.4
Probab=100.00 E-value=1.8e-65 Score=399.88 Aligned_cols=156 Identities=37% Similarity=0.665 Sum_probs=146.7
Q ss_pred CeEecCCCCCCCcceEEEeCCCCCCCeeEEEEEEEccCcceEecc-cccccCcCCCCCCCCCCceEEecCCCCCchhhhc
Q psy9258 1 MIITKTGRRMFPSLQLQVSGLDQAAHYSLLVEFHLASPHKYKYKT-SWEPVGDAERPIAHPAARLYSHPAGHALGSFWTG 79 (163)
Q Consensus 1 Mivtk~GR~~FP~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk~~~-~W~~~~~~~~~~~~~~~~~~~H~~~~~tG~~WM~ 79 (163)
|||||+||||||.|+|+|+||||++.|.|.|+|+++|++||+|.+ +|.++|++++. .+.+++.|||||++|++||+
T Consensus 25 MIiTk~GRrmFP~l~~~v~GLdp~~~Y~v~l~~~~~d~~rykf~~~~W~~~gkae~~---~p~r~~~Hpdsp~tG~~WM~ 101 (193)
T 1h6f_A 25 MVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPE---MPKRMYIHPDSPATGEQWMS 101 (193)
T ss_dssp EECCTTCBCCSSCCEEEEESCCSSSEEEEEEEEEEEEEEEEEEETTEEEEEEECCCC---CCCCCEECTTCSEEHHHHTT
T ss_pred EEEecCCcccCceeEEEEeCCCcccceEEEEEEEEccCceeeccCCcEEECcccCCC---CCcceEecCCCcccHHHHhh
Confidence 999999999999999999999999999999999999999999999 99999999988 78899999999999999999
Q ss_pred CceeeeeeeeecCCc--cceEEecCcceeccEEEEEeCCCCCCCCCCCCCeeeEEEccccEEEEcCCCCChhhhHhhccC
Q psy9258 80 QTLHLNKIKLANAFV--EGTILLNSMHKYIPRIHLIKNSPQPSTHWETPLSRAIFAFPITEFIAVTAYANQTVKDDACLK 157 (163)
Q Consensus 80 ~~v~F~~~kitn~~~--~~~i~l~s~hkY~PvL~I~~~~~~~~~~~~~~~~~~~f~f~~T~FIaVT~YqN~~I~~lK~~~ 157 (163)
++|+|++|||||+.. .++|.|+|||||+|||||+++++.... +.+.+ .+|+||||||||||+|||++|++||+++
T Consensus 102 ~~VsF~klKLTNn~~~~~~~i~L~SmHKY~PrlhI~~~~~~~~~--~~~~~-~tf~FpeT~FiAVTaYQN~~It~LKi~~ 178 (193)
T 1h6f_A 102 KVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKL--PYSTF-RTYLFPETEFIAVTAYQNDKITQLKIDN 178 (193)
T ss_dssp SCEECTTCCEECCTTCCSCCEECCTTEEEEEEEEEECCSCGGGG--GGSCC-EEEECGGGCEEEESSCSCHHHHHHHHHH
T ss_pred CCcceeeeeeeccCCCCCCcEEecCCceEeeEEEEEEcCCccCC--CCcce-EEEECCCeEEEEEeccCchhhhhhhhcC
Confidence 999999999999987 679999999999999999998765432 22356 8999999999999999999999999999
Q ss_pred cCCCC
Q psy9258 158 KSMLS 162 (163)
Q Consensus 158 n~~~~ 162 (163)
|.||.
T Consensus 179 NpFAk 183 (193)
T 1h6f_A 179 NPFAK 183 (193)
T ss_dssp CGGGG
T ss_pred CCCCc
Confidence 99995
No 4
>4a04_A T-box transcription factor TBX1; transcription, T-box proteins; HET: DNA; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.2e-64 Score=397.96 Aligned_cols=158 Identities=36% Similarity=0.680 Sum_probs=144.5
Q ss_pred CeEecCCCCCCCcceEEEeCCCCCCCeeEEEEEEEccCcceEe--cc-cccccCcCCCCCCCCCCceEEecCCCCCchhh
Q psy9258 1 MIITKTGRRMFPSLQLQVSGLDQAAHYSLLVEFHLASPHKYKY--KT-SWEPVGDAERPIAHPAARLYSHPAGHALGSFW 77 (163)
Q Consensus 1 Mivtk~GR~~FP~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk~--~~-~W~~~~~~~~~~~~~~~~~~~H~~~~~tG~~W 77 (163)
|||||+||||||.|+|+|+||||++.|.|.|+|+++|++|||| .+ +|.++|++++. .++++++|||||++|++|
T Consensus 36 MIITK~GRrmFP~l~~~vsGLdp~~~Y~~~l~~~~~D~~ryry~~~~~~W~~~gkae~~---~p~r~~~Hpdsp~tG~~W 112 (203)
T 4a04_A 36 MIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPA---TPGRVHYHPDSPAKGAQW 112 (203)
T ss_dssp EECCSSCEECSSCEEEEEESCCTTSEEEEEEEEEESCSEEEEEETTTTEEEEEEECCCC---CCCCCCBCTTCSEEHHHH
T ss_pred EEEEeCCcccCCceEEEEeCCCcccCcEEEEEEEEccCCeEEecccCCCEeECCccCCC---CCCceEEcCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999998 46 99999999988 788999999999999999
Q ss_pred hcCceeeeeeeeecCCc--cceEEecCcceeccEEEEEeCCCCCCC-CCCCCCeeeEEEccccEEEEcCCCCChhhhHhh
Q psy9258 78 TGQTLHLNKIKLANAFV--EGTILLNSMHKYIPRIHLIKNSPQPST-HWETPLSRAIFAFPITEFIAVTAYANQTVKDDA 154 (163)
Q Consensus 78 M~~~v~F~~~kitn~~~--~~~i~l~s~hkY~PvL~I~~~~~~~~~-~~~~~~~~~~f~f~~T~FIaVT~YqN~~I~~lK 154 (163)
|+++|+|++|||||+.. +++|.|+|||||+|||+|+++++.... ..+.+.+ .+|+||||+|||||+|||++|++||
T Consensus 113 M~~~VsF~klKLTNn~~d~~g~I~L~SmHKYqPrlhIv~~~~~~~~~~~~~~~~-~tf~FpeT~FiAVTaYQN~~It~LK 191 (203)
T 4a04_A 113 MKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENF-KTFVFEETRFTAVTAYQNHRITQLK 191 (203)
T ss_dssp HHSCEEECSCEEECCTTCCSSCEECCTTCEEEEEEEEEECCCC--------CCE-EEEECGGGCEEEESSCCCHHHHHHH
T ss_pred hhCcceeeeeecccCccCcCCEEEEeeccccccEEEEEEcCCCcccccccCCce-EEEECCCcEEEeeCccCCHHHHHHH
Confidence 99999999999999987 679999999999999999999876432 2233456 8999999999999999999999999
Q ss_pred ccCcCCCC
Q psy9258 155 CLKKSMLS 162 (163)
Q Consensus 155 ~~~n~~~~ 162 (163)
+++|.||.
T Consensus 192 i~~NPFAk 199 (203)
T 4a04_A 192 IASNPFAK 199 (203)
T ss_dssp HHHCGGGG
T ss_pred hccCCCCc
Confidence 99999995
No 5
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=73.18 E-value=2.9 Score=26.49 Aligned_cols=24 Identities=17% Similarity=0.206 Sum_probs=20.1
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...+.|.||.|...|.+.|.-.-
T Consensus 53 ~~~~~~l~~L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 53 EEDTAELQGLRPGSEYTVSVVALH 76 (94)
T ss_dssp SCCEEEECSCCCCSEEEEEEEECS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 456899999999999998887643
No 6
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.87 E-value=3.9 Score=26.69 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=18.9
Q ss_pred eEEEeCCCCCCCeeEEEEEEE
Q psy9258 15 QLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 15 ~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.|.|.||.|+..|.+.|.-.-
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~ 82 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLR 82 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEEC
T ss_pred EEEECCCCCCCEEEEEEEEEC
Confidence 899999999999999888763
No 7
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=71.88 E-value=2.7 Score=27.01 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.-.+.|.||.|...|.+.|.-..
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 35799999999999999888765
No 8
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=71.62 E-value=3.2 Score=27.20 Aligned_cols=22 Identities=23% Similarity=0.289 Sum_probs=19.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
.-.+.|.||+|...|.+.|.-.
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 4579999999999999988765
No 9
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=71.03 E-value=2.9 Score=27.14 Aligned_cols=23 Identities=13% Similarity=0.218 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.-.+.|+||.|...|.+.|.-..
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~ 76 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVK 76 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEe
Confidence 45799999999999999887655
No 10
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=70.86 E-value=4.5 Score=26.23 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=21.1
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLAS 37 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~d 37 (163)
.-.|.|.||+|...|.+.|.-...+
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~~~ 83 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWGED 83 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCC
Confidence 4579999999999999999877644
No 11
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=70.79 E-value=3.1 Score=26.97 Aligned_cols=24 Identities=13% Similarity=0.235 Sum_probs=20.5
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|+..|.+.|.-.-
T Consensus 53 ~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 53 SITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp TEEEEEECSCCTTCEEEEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEEEe
Confidence 356899999999999999887755
No 12
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=70.67 E-value=3 Score=27.31 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.-.|.|.||.|...|.+.|.-.-
T Consensus 55 ~~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 55 ENQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 35799999999999999988765
No 13
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.55 E-value=3.2 Score=28.22 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=18.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...+.|.||.|+..|.+.|.-.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~ 98 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVT 98 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEEC
T ss_pred ceEEEecCCCCCCEEEEEEEEe
Confidence 4679999999999999988643
No 14
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=70.26 E-value=3.6 Score=26.60 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2djs_A 62 TNTARIDGLRPGMVYVVQVRART 84 (108)
T ss_dssp SSEEEEESCCTTCEEEEEEEEEE
T ss_pred ccEEEEcCCCCCCEEEEEEEEEe
Confidence 46899999999999999887654
No 15
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=69.99 E-value=2.6 Score=28.23 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...+.|.||.|+..|.+.|.-..
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~ 89 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTK 89 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEEC
T ss_pred cCEEEeCCCCCCcEEEEEEEEec
Confidence 56899999999999999986554
No 16
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=69.83 E-value=3.3 Score=26.47 Aligned_cols=23 Identities=22% Similarity=0.288 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-..
T Consensus 54 ~~~~~i~~L~p~t~Y~~~V~A~n 76 (98)
T 3teu_A 54 STSVTITGLTPGVEYVVSVYALK 76 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEecCCCCCCEEEEEEEEEe
Confidence 56899999999999999887665
No 17
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=69.52 E-value=3.2 Score=27.55 Aligned_cols=23 Identities=13% Similarity=0.105 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.-.|.|.||.|...|.+.|.-..
T Consensus 58 ~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 58 AVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp CSEEEECSCCSSSEEEEEEEEEE
T ss_pred ccEEEEeCCCCCCEEEEEEEEEe
Confidence 35799999999999999998765
No 18
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=69.17 E-value=3.3 Score=28.06 Aligned_cols=22 Identities=18% Similarity=0.046 Sum_probs=19.4
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
-.|.|.||.|...|.|.|.-+.
T Consensus 70 t~~~l~gL~PgT~Y~~~V~A~~ 91 (112)
T 2cui_A 70 HSAVLRDLRSGTLYSLTLYGLR 91 (112)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCEEEEEEEEEE
Confidence 4789999999999999998765
No 19
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=68.95 E-value=3.8 Score=26.95 Aligned_cols=23 Identities=13% Similarity=0.187 Sum_probs=19.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 1x4y_A 68 RYWHSISHLQPETSYDIKMQCFN 90 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEC
T ss_pred EeEEEcCCCCCCCEEEEEEEEEc
Confidence 35799999999999999887644
No 20
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=68.81 E-value=3.8 Score=26.29 Aligned_cols=23 Identities=17% Similarity=0.338 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 61 ~~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 61 DQHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CCEEEEECCCTTCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEc
Confidence 35899999999999999887654
No 21
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.50 E-value=4.5 Score=26.33 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...+.|.||.|+..|.+.|.-.-
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n 85 (109)
T 2e7h_A 63 ENRAELRGLKRGASYLVQVRARS 85 (109)
T ss_dssp SSEEEEESCCTTSCEEEEEEEEC
T ss_pred CCEEEECCCCCCCeEEEEEEEEe
Confidence 35899999999999999887654
No 22
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=67.03 E-value=3.7 Score=26.67 Aligned_cols=24 Identities=17% Similarity=0.333 Sum_probs=20.3
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...|.|.||.|+..|.+.|.-.-
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~n 91 (115)
T 1x5z_A 68 PGTSYRLQGLKPNSLYYFRLAARS 91 (115)
T ss_dssp SSSEEEEECCCTTCEEEECEEEEC
T ss_pred CCcEEEECCCCCCCeEEEEEEEEC
Confidence 467899999999999999886553
No 23
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=66.29 E-value=5.2 Score=26.15 Aligned_cols=23 Identities=17% Similarity=0.140 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~~ 80 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAMW 80 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEB
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 45899999999999999887764
No 24
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=66.23 E-value=4.9 Score=26.46 Aligned_cols=23 Identities=26% Similarity=0.348 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n 101 (125)
T 1uen_A 79 KTHGMLPGLEPFSHYTLNVRVVN 101 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEec
Confidence 56899999999999999888654
No 25
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=66.17 E-value=5.1 Score=26.02 Aligned_cols=24 Identities=29% Similarity=0.441 Sum_probs=19.6
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...|.|.||.|+..|.+.|.-.-
T Consensus 59 ~~~~~~v~~L~p~t~Y~frV~A~n 82 (106)
T 1x4x_A 59 PGLSYEIKGLSPATTYYCRVQALS 82 (106)
T ss_dssp SCSEEEEESCCSSCEEEEEEEEEC
T ss_pred CcceEEEcCCCCCCEEEEEEEEEc
Confidence 346899999999999998886543
No 26
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=65.76 E-value=5.2 Score=26.15 Aligned_cols=23 Identities=22% Similarity=0.283 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 77 ~~~~~i~~L~p~t~Y~~~V~A~n 99 (122)
T 1va9_A 77 SEVYTLDNLKKFAQYGVVVQAFN 99 (122)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 37899999999999999887765
No 27
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=65.74 E-value=3.9 Score=27.07 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.-.+.++||.|...|.|.|--..
T Consensus 58 ~~s~~l~~L~PgT~Y~V~v~a~~ 80 (95)
T 2h41_A 58 ATSVNIPDLLPGRKYIVNVYQIS 80 (95)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 35788999999999999987654
No 28
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.37 E-value=5.1 Score=26.66 Aligned_cols=23 Identities=13% Similarity=0.277 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 70 ~~~~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 70 QRYYSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp CCEEEECSCCSSSBEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 46799999999999999887654
No 29
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=65.27 E-value=4.4 Score=27.29 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=20.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
.-.|.|.||.|+..|.+.|.-...
T Consensus 56 ~ts~~l~gL~P~T~Y~v~V~A~~~ 79 (114)
T 3qwq_B 56 VHTATISGLKPGVDYTITVYAVTD 79 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEEC
Confidence 357999999999999999876653
No 30
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.33 E-value=5 Score=26.44 Aligned_cols=23 Identities=13% Similarity=0.081 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...+.|.||.|+..|.+.|.-.-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ee2_A 73 EYSARLENLLPDTQYFIEVGACN 95 (119)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEC
T ss_pred EeEEEECCCCCCCEEEEEEEEEc
Confidence 45899999999999999887653
No 31
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=64.26 E-value=4.7 Score=26.49 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=17.9
Q ss_pred EEEeCCCCCCCeeEEEEEEE
Q psy9258 16 LQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 16 ~~v~GL~p~~~Y~i~l~~~~ 35 (163)
|.|.||.|+..|.+.|.-.-
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~ 83 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLT 83 (107)
T ss_dssp EEEESCCSSCEEEEEEEEEC
T ss_pred EEECCCCCCCEEEEEEEEEC
Confidence 89999999999999887665
No 32
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.19 E-value=4.9 Score=25.79 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~n 82 (106)
T 2ed8_A 60 GLSYKLEGLKKFTEYSLRFLAYN 82 (106)
T ss_dssp SSCEEEESCCTTCEEEEEEEEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 56899999999999999887653
No 33
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=63.98 E-value=4.7 Score=27.39 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...+.|.||.|...|.+.|.-.-
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 46899999999999999887643
No 34
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=63.92 E-value=5.9 Score=25.58 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=18.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...|.|.||.|+..|.+.|.-.
T Consensus 63 ~~~~~v~~L~p~t~Y~frV~A~ 84 (109)
T 1x5x_A 63 DLAYTVKNLRRSTKYKFKVIAY 84 (109)
T ss_dssp CSEEEEESCCSSCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 5689999999999999887654
No 35
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=63.82 E-value=4.6 Score=26.92 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
.-.+.|.||.|...|.+.|.-+
T Consensus 58 ~t~~~i~gL~PgT~Y~~~V~A~ 79 (104)
T 2dle_A 58 EPRAVIPGLRSSTFYNITVCPV 79 (104)
T ss_dssp SSEEECCSCCSSCEEEEEEEEE
T ss_pred CCEEEECCCCCCCEEEEEEEEE
Confidence 3578999999999999999987
No 36
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.63 E-value=5.8 Score=25.94 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 72 ~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 72 QTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEc
Confidence 56899999999999999887654
No 37
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=63.25 E-value=5.2 Score=25.93 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 65 ~~~~~i~~L~p~t~Y~~rV~A~n 87 (105)
T 2haz_A 65 EGIVTIVGLKPETTYAVRLAALN 87 (105)
T ss_dssp HSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 46899999999999999887654
No 38
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.07 E-value=5.8 Score=25.18 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=19.2
Q ss_pred CcceEEEeCCCCCCCeeEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
....|.|.||.|...|.+.|.-.
T Consensus 59 ~~~~~~i~~L~p~t~Y~~~V~A~ 81 (106)
T 2dju_A 59 ATTRYSIGGLSPFSEYAFRVLAV 81 (106)
T ss_dssp CSSEEEEESCCTTCEEEEEEEEE
T ss_pred CccEEEEeCCCCCcEEEEEEEEE
Confidence 35679999999999999888654
No 39
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=62.96 E-value=5.2 Score=26.01 Aligned_cols=23 Identities=26% Similarity=0.287 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 70 ~~~~~i~~L~p~t~Y~~~V~A~n 92 (116)
T 1x5g_A 70 SHSYTINGLKKYTEYSFRVVAYN 92 (116)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEC
T ss_pred CceEEEcCCCCCCEEEEEEEEEc
Confidence 56899999999999999887643
No 40
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=62.91 E-value=5.5 Score=26.07 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n 96 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQN 96 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEC
Confidence 67899999999999998886654
No 41
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.87 E-value=7.4 Score=26.30 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=20.3
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...|.|.||.|...|.+.|.-+-
T Consensus 78 ~~~~~~v~gL~p~t~Y~frV~A~N 101 (127)
T 2dmk_A 78 KQNHYTVHGLQSGTRYIFIVKAIN 101 (127)
T ss_dssp CSSEEEEESCCSSCEEEEEEEEEE
T ss_pred cCCeEEECCCCCCCEEEEEEEEEe
Confidence 467899999999999998886655
No 42
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.32 E-value=8.1 Score=25.31 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=19.1
Q ss_pred CcceEEEeCCCCCCCeeEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
....|.|.||.|+..|.+.|.-.
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2db8_A 63 KETMCTVDGLHFNSTYNARVKAF 85 (110)
T ss_dssp SCSCEEEECCCSSSCCEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEE
Confidence 45679999999999999887654
No 43
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=62.00 E-value=6.2 Score=26.26 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 84 ~~~~~i~~L~p~t~Y~~~V~A~n 106 (130)
T 1wfo_A 84 ARQYTATGLKPESVYLFRITAQT 106 (130)
T ss_dssp CCEEEEESCCSSSEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEe
Confidence 56899999999999998887654
No 44
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.87 E-value=6.5 Score=25.79 Aligned_cols=23 Identities=26% Similarity=0.449 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 73 TLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEc
Confidence 56899999999999998886654
No 45
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=61.20 E-value=5.8 Score=25.60 Aligned_cols=23 Identities=17% Similarity=0.063 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVT 84 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEC
Confidence 35899999999999999887654
No 46
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.03 E-value=6 Score=25.95 Aligned_cols=23 Identities=9% Similarity=0.044 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||+|+..|.+.|+-..
T Consensus 66 ~~~~~l~~L~p~t~Y~~~VRa~~ 88 (109)
T 1uc6_A 66 GTAHTITDAYAGKEYIIQVAAKD 88 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCB
T ss_pred CCEEEEeCCCCCCEEEEEEEEEe
Confidence 46889999999999999988654
No 47
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.88 E-value=4.6 Score=27.36 Aligned_cols=18 Identities=17% Similarity=0.261 Sum_probs=15.8
Q ss_pred eEEEeCCCCCCCeeEEEE
Q psy9258 15 QLQVSGLDQAAHYSLLVE 32 (163)
Q Consensus 15 ~~~v~GL~p~~~Y~i~l~ 32 (163)
.|.|+||.|+..|..-|.
T Consensus 62 SYtI~GL~P~~~YE~qv~ 79 (98)
T 1oww_A 62 SYTIKGLKPGVVYEGQLI 79 (98)
T ss_dssp EEEECSCCSSEEEEEEEE
T ss_pred eEEEecCCCCcEEEEEEE
Confidence 699999999999996654
No 48
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=60.82 E-value=6.1 Score=25.74 Aligned_cols=23 Identities=9% Similarity=0.125 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...+.|.||+|...|.+.|.-.-
T Consensus 64 ~~~~~l~~L~p~t~Y~v~V~A~n 86 (102)
T 3n1f_C 64 KQWHMIGHLQPETSYDIKMQCFN 86 (102)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred ceEEECCCCCCCCEEEEEEEEEC
Confidence 45789999999999999887643
No 49
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.68 E-value=7.7 Score=25.48 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=20.1
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...|.|.||.|...|.+.|.-.-
T Consensus 73 ~~~~~~v~~L~p~t~Y~frV~A~n 96 (120)
T 2crm_A 73 ATREHLCDRLNPGCFYRLRVYCIS 96 (120)
T ss_dssp SCSEEEECSCCTTSCEEEEEEEEE
T ss_pred cccEEEECCCCCCCEEEEEEEEEc
Confidence 467899999999999998886554
No 50
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.32 E-value=7.4 Score=25.84 Aligned_cols=24 Identities=21% Similarity=0.356 Sum_probs=20.4
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|...|.+.|.-.-
T Consensus 77 ~~~~~~i~~L~p~t~Y~~~V~A~n 100 (134)
T 2edx_A 77 EHSSWDLVGLEKWTEYRVWVRAHT 100 (134)
T ss_dssp TCSEEEEESCCTTCEEEEEEEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 357899999999999999887654
No 51
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.11 E-value=5.5 Score=25.67 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 65 ~~~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 65 TTRATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp SSEEEECSCCTTCEEEECEEEEE
T ss_pred CCEEEEcCCCCCCEEEEEEEEEe
Confidence 46899999999999998887664
No 52
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.00 E-value=6.6 Score=25.41 Aligned_cols=23 Identities=17% Similarity=0.231 Sum_probs=19.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 2ede_A 68 RLTHQIMDLNLDTMYYFRIQARN 90 (114)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEe
Confidence 46799999999999998887653
No 53
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.98 E-value=5.9 Score=26.48 Aligned_cols=23 Identities=13% Similarity=0.205 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|...|.+.|.-.-
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~ 81 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLY 81 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEe
Confidence 35799999999999999887653
No 54
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=58.83 E-value=5 Score=27.11 Aligned_cols=23 Identities=17% Similarity=0.329 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 80 ~~~~~i~~L~p~t~Y~~~V~A~n 102 (126)
T 1x5i_A 80 QRYYTIENLDPSSHYVITLKAFN 102 (126)
T ss_dssp CCEEEECSCCSSCEECCEEEEEC
T ss_pred eeEEEEeCCCCCCEEEEEEEEEe
Confidence 46899999999999998887654
No 55
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.35 E-value=4 Score=25.91 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=18.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...|.|.||.|+..|.+.|.-.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~ 84 (103)
T 2edy_A 63 DTRFTLTGLKPDTTYDIKVRAW 84 (103)
T ss_dssp SSCCEECSCCTTCCEEEECCEE
T ss_pred cceEEEcCCCCCCEEEEEEEEE
Confidence 4578999999999999888654
No 56
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=58.07 E-value=11 Score=25.13 Aligned_cols=24 Identities=29% Similarity=0.301 Sum_probs=19.7
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|...|.+.|.-.-
T Consensus 66 ~~~~~~v~~L~p~t~Y~frV~A~N 89 (112)
T 1bpv_A 66 LENEFTVSGLTEDAAYEFRVIAKN 89 (112)
T ss_dssp CSSEEEECSCCSSCCEEEEEEEEC
T ss_pred ccCEEEECCCCCCCEEEEEEEEEE
Confidence 467899999999999998776543
No 57
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=57.86 E-value=8.3 Score=25.17 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=19.9
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|...|.+.|.-.-
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVN 97 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEE
T ss_pred CccEEEECCcCCCCEEEEEEEEEc
Confidence 356899999999999998887653
No 58
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=57.64 E-value=7.9 Score=25.84 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|+..|.+.|.-.-
T Consensus 66 ~~~~~i~~L~p~t~Y~~rV~A~n 88 (122)
T 2e3v_A 66 EGIVTIVGLKPETTYAVRLAALN 88 (122)
T ss_dssp TTEEEECSCCTTCEEEEEEEEEE
T ss_pred cceEEeCCCCCCCEEEEEEEEEe
Confidence 56899999999999999887654
No 59
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.25 E-value=3.5 Score=26.91 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...+.|.||.|...|.+.|.-.
T Consensus 60 ~~~~~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 60 RSHVTLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp SSEEEECSCCSSCCCBCBBCBB
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 4689999999999999776543
No 60
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.97 E-value=7 Score=25.70 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 84 ~~~~~i~~L~p~t~Y~~~V~A~n 106 (124)
T 2ed9_A 84 NLWYLFTGLEKGSQYSFQVSAMT 106 (124)
T ss_dssp CSEEEEECCCSSCEEEECEEEEC
T ss_pred cCEEEEcCCCCCCEEEEEEEEEc
Confidence 46799999999999998886543
No 61
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=56.85 E-value=6.9 Score=26.04 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=20.5
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|+..|.+.|.-.-
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n 98 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALT 98 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 356899999999999999887664
No 62
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=56.25 E-value=7.9 Score=26.43 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...+.|.||.|...|.+.|.--
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~ 95 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPY 95 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEE
Confidence 5689999999999999988753
No 63
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=55.99 E-value=10 Score=24.55 Aligned_cols=23 Identities=17% Similarity=-0.026 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 56899999999999998887654
No 64
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.74 E-value=5.7 Score=25.91 Aligned_cols=24 Identities=21% Similarity=0.102 Sum_probs=20.7
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|+..|.+.|.-.-
T Consensus 74 ~~~~~~i~~L~p~t~Y~~~V~A~n 97 (121)
T 2dlh_A 74 DSQITTIGNLVPQKTYSVKVLAFT 97 (121)
T ss_dssp SCSEECCBSCCSSCEEEEEEEEEE
T ss_pred CceEEEecCCCCCCEEEEEEEEEe
Confidence 466899999999999999887765
No 65
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=55.68 E-value=9.5 Score=25.12 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 46899999999999998886554
No 66
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.86 E-value=9.6 Score=24.68 Aligned_cols=24 Identities=21% Similarity=0.227 Sum_probs=19.5
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|...|.+.|.-.-
T Consensus 70 ~~~~~~i~~L~p~t~Y~frV~A~n 93 (117)
T 1uem_A 70 KTTLYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEEC
Confidence 355899999999999998886543
No 67
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=54.50 E-value=13 Score=25.34 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-+-
T Consensus 74 ~t~~~v~gL~p~t~Y~frV~A~n 96 (120)
T 1wfu_A 74 ATRHVVEGLEPRTLYKFRLKVTS 96 (120)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEEC
Confidence 45799999999999998887654
No 68
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.50 E-value=9 Score=24.72 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=20.0
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|...|.+.|.-.-
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 63 DKTKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccCEEEECCCCCCCEEEEEEEEEc
Confidence 467899999999999998876544
No 69
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=54.19 E-value=10 Score=23.53 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|+..|.+.|.-.-
T Consensus 50 ~~~~~~~~L~~~t~Y~~~V~A~n 72 (88)
T 1k85_A 50 GTTATISGLAADTSYTFTVKAKD 72 (88)
T ss_dssp SSEEEECCCCSSCEEEEEEEEEE
T ss_pred CCEEEeCCCCCCCEEEEEEEEEe
Confidence 45899999999999998887654
No 70
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=52.95 E-value=8.3 Score=25.18 Aligned_cols=24 Identities=13% Similarity=0.134 Sum_probs=19.2
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...|.|.||.|...|.+.|.-.-
T Consensus 71 ~~~~~~v~~L~p~t~Y~frV~A~n 94 (118)
T 1x3d_A 71 SQKQFKITKLSPAMGCKFRLSARN 94 (118)
T ss_dssp SCSEEEEESCCTTCEEEEECCEEE
T ss_pred CCcEEEeCCCCCCCEEEEEEEEEE
Confidence 346899999999999998776543
No 71
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=52.71 E-value=7.3 Score=25.23 Aligned_cols=22 Identities=23% Similarity=0.255 Sum_probs=18.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...|.|.||.|...|.+.|.-.
T Consensus 64 ~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2crz_A 64 EVECTVSSLLPGKTYSFRLRAA 85 (110)
T ss_dssp CSEEEEESCCTTCEEEECCEEE
T ss_pred cEEEEECCcCCCCEEEEEEEEE
Confidence 5689999999999999877554
No 72
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.66 E-value=6.2 Score=25.71 Aligned_cols=23 Identities=39% Similarity=0.372 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYN 95 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEEc
Confidence 57899999999999998877654
No 73
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=50.77 E-value=11 Score=25.52 Aligned_cols=22 Identities=9% Similarity=0.117 Sum_probs=18.1
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
.-.|.|.||.|...|.+.|.-+
T Consensus 63 ~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 63 KDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp TCCEEECCCCTTCCEEEEEEEE
T ss_pred cCEEEEcCCCCCCEEEEEEEEE
Confidence 3568999999999999877543
No 74
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.51 E-value=9.3 Score=25.38 Aligned_cols=23 Identities=9% Similarity=-0.016 Sum_probs=19.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 78 ~~~~~l~~L~p~t~Y~~~V~A~n 100 (124)
T 2dbj_A 78 GSRARISVQVHNATCTVRIAAVT 100 (124)
T ss_dssp TSCEEEECCCSSSEEEECEEEEE
T ss_pred cceEEecCCCCCCEEEEEEEEEC
Confidence 46899999999999998887654
No 75
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=45.61 E-value=15 Score=24.45 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=18.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
..|.|.||.|...|.+.|.-+-
T Consensus 71 ~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 71 FTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEECSCCSSEEEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEe
Confidence 4689999999999998776544
No 76
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=43.61 E-value=19 Score=25.27 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=18.9
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
..+.|.||.|...|.+.|.-.-
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n 103 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEY 103 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEe
Confidence 5688999999999999887654
No 77
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=42.82 E-value=31 Score=28.39 Aligned_cols=41 Identities=17% Similarity=0.258 Sum_probs=30.7
Q ss_pred eEecCCCCC-CCcceEEEeCCCCCCCeeEEEEEEEccCcceE
Q psy9258 2 IITKTGRRM-FPSLQLQVSGLDQAAHYSLLVEFHLASPHKYK 42 (163)
Q Consensus 2 ivtk~GR~~-FP~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk 42 (163)
.|++.++.+ ==.+.+.|+||.|...|++...+.--+...|+
T Consensus 23 ~~~~~~~~~~de~~~i~~~gl~p~~~~~~~~~~~~~~~~~~~ 64 (446)
T 3hlk_A 23 ILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQ 64 (446)
T ss_dssp EEESCSCEETTSCCEEEEESCCTTCEEEEEEEEECTTCCEEE
T ss_pred EEecccccCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCEEE
Confidence 356666666 33578999999999999988888775555665
No 78
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=42.04 E-value=39 Score=27.32 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=29.4
Q ss_pred eEecCCCCCCC-cceEEEeCCCCCCCeeEEEEEEEccCcceE
Q psy9258 2 IITKTGRRMFP-SLQLQVSGLDQAAHYSLLVEFHLASPHKYK 42 (163)
Q Consensus 2 ivtk~GR~~FP-~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk 42 (163)
.|+..++.+.- .+.+.|+||.|...|++...+.--+...|+
T Consensus 7 ~~~~~~~~~~d~~~~i~~~gl~~~~~~~~~~~~~~~~~~~~~ 48 (422)
T 3k2i_A 7 ILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFR 48 (422)
T ss_dssp EEEC---CBTTSCCEEEEESCCTTCEEEEEEEEECTTSCEEE
T ss_pred EEecCccccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCEEE
Confidence 35666666643 578999999999999998888876566665
No 79
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=41.98 E-value=14 Score=26.24 Aligned_cols=24 Identities=13% Similarity=0.032 Sum_probs=20.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
...|.|.||.|...|.+.|.-.-.
T Consensus 55 ~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 55 LNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp CCEEEECSCCTTEEEEEEEEEECT
T ss_pred ccEEEecCCCCCCEEEEEEEEEec
Confidence 458999999999999999987643
No 80
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=41.42 E-value=19 Score=25.19 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|...|.+.|.-..
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~ 79 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEK 79 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEES
T ss_pred CCEEEECCCCCCCEEEEEEEEEc
Confidence 46799999999999999988753
No 81
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=40.40 E-value=21 Score=25.62 Aligned_cols=24 Identities=29% Similarity=0.396 Sum_probs=20.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
...|.+.||.|...|.+.|+-...
T Consensus 171 ~~~~~l~~L~p~t~Y~~~Vra~~~ 194 (215)
T 1cd9_B 171 KDQFELCGLHQAPVYTLQMRCIRS 194 (215)
T ss_dssp EEEEEECCCCSCSCEEEEEEEEES
T ss_pred ceEEEEcCCCCCCEEEEEEEeeEC
Confidence 457899999999999999987764
No 82
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=40.13 E-value=9 Score=25.29 Aligned_cols=22 Identities=14% Similarity=0.069 Sum_probs=18.6
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
..|.|+||.|.-.|...|.-+.
T Consensus 38 nSYtIsGLkPGvtYegQLisV~ 59 (89)
T 1q38_A 38 NSYTIKGLKPGVVYEGQLISIQ 59 (89)
T ss_dssp SCCCCCCCCTTCCEEEEEEEEC
T ss_pred ceEEEeccCCCcEEEEEEEeee
Confidence 5799999999999998876554
No 83
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=39.67 E-value=16 Score=26.19 Aligned_cols=24 Identities=13% Similarity=0.175 Sum_probs=20.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
...|.|.||.|...|.+.|.-.-.
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A~n~ 186 (215)
T 1bqu_A 163 RSSFTVQDLKPFTEYVFRIRCMKE 186 (215)
T ss_dssp CSEEEECSCCSSEEEEEEEEEEET
T ss_pred cceEEeCCCCCCCEEEEEEEEccC
Confidence 468999999999999998887663
No 84
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=39.57 E-value=19 Score=25.67 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=19.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
..|.|.||.|+..|.+.|.-.-
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEEEe
Confidence 6799999999999998887654
No 85
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=38.98 E-value=25 Score=25.73 Aligned_cols=22 Identities=18% Similarity=0.218 Sum_probs=19.4
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
..|.|.||.|...|.+.|.-.-
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n 181 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARN 181 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEEEC
Confidence 5899999999999999987654
No 86
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=38.72 E-value=37 Score=26.10 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=21.7
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
....|.|.||+|...|.+.|+-...
T Consensus 265 ~~~~~~l~~L~p~t~Y~~qVra~~~ 289 (314)
T 3bpo_C 265 NTSCFMVPGVLPDTLNTVRIRVKTN 289 (314)
T ss_dssp SEEEEEEESCCTTSCEEEEEEEEEC
T ss_pred CceEEEEccCCCCCEEEEEEEeeec
Confidence 4578999999999999999988763
No 87
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=38.62 E-value=21 Score=25.49 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 165 ~~~~~i~~L~p~t~Y~~~V~A~n 187 (211)
T 3p4l_A 165 RLTHQIQELTLDTPYYFKIQARN 187 (211)
T ss_dssp CSEEEECCCCTTCEEEEEEEEEE
T ss_pred eeEEEEcCCCCCCEEEEEEEEEc
Confidence 56799999999999999887654
No 88
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=37.70 E-value=23 Score=25.40 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=20.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|+-..
T Consensus 164 ~~~~~l~~L~p~t~Y~v~Vra~~ 186 (210)
T 3n06_B 164 QTEFKILSLHPGQKYLVQVRCKP 186 (210)
T ss_dssp CSEEEECCCCTTCEEEEEEEEEE
T ss_pred ceEEEEeccCCCCEEEEEEEEec
Confidence 46899999999999999998876
No 89
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=37.67 E-value=21 Score=25.56 Aligned_cols=23 Identities=22% Similarity=0.210 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|+||.|...|.+.|.-.-
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~a~~ 98 (203)
T 2gee_A 76 VGYYTVTGLEPGIDYDISVYTVK 98 (203)
T ss_dssp CCEEEECSCCTTCEEEEEEEEES
T ss_pred ccEEEeCCCCCCCEEEEEEEEEe
Confidence 56899999999999999887653
No 90
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=36.97 E-value=22 Score=25.26 Aligned_cols=23 Identities=9% Similarity=0.002 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A~n 185 (205)
T 1cfb_A 163 QNNIVIADQPTFVKYLIKVVAIN 185 (205)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEEcCCCCCcEEEEEEEEEc
Confidence 57899999999999998887654
No 91
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=36.88 E-value=23 Score=25.23 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|+||.|...|.+.|.-.-
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n 85 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTK 85 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEE
T ss_pred ceEEEecCcCCCCEEEEEEEEEc
Confidence 45899999999999999988643
No 92
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=36.34 E-value=12 Score=24.94 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=17.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFH 34 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~ 34 (163)
...|.|.||.|...|.+.|.-.
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~ 99 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQV 99 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEE
Confidence 4589999999999999777543
No 93
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=35.69 E-value=15 Score=24.13 Aligned_cols=21 Identities=14% Similarity=0.085 Sum_probs=17.1
Q ss_pred CcceEEEeCCCCCCCeeEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVE 32 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~ 32 (163)
....|.|.||.|...|.+.|.
T Consensus 72 ~~~~~~v~~L~p~t~Y~frV~ 92 (120)
T 2yux_A 72 HRTSATITELVIGNEYYFRVF 92 (120)
T ss_dssp CSSCCEECCCCSSEEEEEEEC
T ss_pred CcCEEEECCCCCCCEEEEEEE
Confidence 456789999999999987763
No 94
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=35.67 E-value=45 Score=24.15 Aligned_cols=27 Identities=15% Similarity=0.000 Sum_probs=21.5
Q ss_pred CCcceEEEeCCCCCCCeeEEEEEEEcc
Q psy9258 11 FPSLQLQVSGLDQAAHYSLLVEFHLAS 37 (163)
Q Consensus 11 FP~l~~~v~GL~p~~~Y~i~l~~~~~d 37 (163)
.+.-.+.+.||+|...|.+.++..-.+
T Consensus 152 ~~~~~~~l~~L~p~t~Ycv~V~a~~~~ 178 (201)
T 3lqm_A 152 PQYDFEVLRNLEPWTTYCVQVRGFLPD 178 (201)
T ss_dssp CSSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred ecCceEEEecCCCCCcEEEEEEEEecc
Confidence 345568889999999999999877643
No 95
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=35.35 E-value=24 Score=25.10 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=19.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
..|.+.||.|...|.+.|.-.-
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~A~n 89 (209)
T 2vkw_A 68 GIVTIVGLKPETTYAVRLAALN 89 (209)
T ss_dssp SEEEECCCCTTCEEEEEEEEEE
T ss_pred ceEEeCCCCCCCeEEEEEEEEc
Confidence 4799999999999999887654
No 96
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=34.01 E-value=33 Score=23.68 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|...|.+.|.-.-
T Consensus 61 ~~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 61 KTSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEE
T ss_pred ccEEEEcCCCCCCEEEEEEEEEc
Confidence 46789999999999999887664
No 97
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=33.25 E-value=28 Score=25.93 Aligned_cols=24 Identities=13% Similarity=0.296 Sum_probs=21.0
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
+...|.+.||.|...|.+.|.-.-
T Consensus 158 ~~~~~~i~~L~p~t~Y~~~V~A~n 181 (283)
T 1tdq_A 158 PTTKTTLTDLVPGTEYGVGISAVM 181 (283)
T ss_dssp SEEEEEECSCCTTCEEEEEEEEEE
T ss_pred ccceEEEecCCCCCEEEEEEEEEe
Confidence 467899999999999999988764
No 98
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=32.63 E-value=43 Score=24.13 Aligned_cols=23 Identities=13% Similarity=0.325 Sum_probs=19.9
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
..|.+.||+|...|.+-|+-...
T Consensus 151 ~~~~l~~l~p~~~Y~vqVR~~~~ 173 (199)
T 2b5i_C 151 HKFSLPSVDGQKRYTFRVRSRFN 173 (199)
T ss_dssp CEEEECSCCTTSCEEEEEEEECC
T ss_pred eEEEecCCCCCcEEEEEEEEecc
Confidence 57889999999999999996653
No 99
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=31.45 E-value=31 Score=24.49 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|...|.+.|.-.-
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n 91 (214)
T 2ibg_A 69 SFTASVTDLKPQHTYRFRILAVY 91 (214)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEE
T ss_pred ceeEEecCCcCCCEEEEEEEEEe
Confidence 46789999999999999888763
No 100
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=30.78 E-value=38 Score=24.63 Aligned_cols=23 Identities=13% Similarity=0.060 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|+||.|...|.+.|.-.-
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 45799999999999999888764
No 101
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=29.76 E-value=50 Score=24.19 Aligned_cols=24 Identities=8% Similarity=0.318 Sum_probs=20.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
.-.+.|.||.|...|.+.++....
T Consensus 159 ~~~~~i~~L~p~t~Ycv~Vra~~~ 182 (206)
T 4doh_B 159 GIPVHLETMEPGAAYCVKAQTFVK 182 (206)
T ss_dssp SSEEEEEECCSSSCEEEEEEEEEG
T ss_pred CeEEEEeCCCCCCcEEEEEEEEec
Confidence 356899999999999999887753
No 102
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=29.70 E-value=33 Score=25.27 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=20.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...+.|.||+|+..|.+.|+-..
T Consensus 179 ~~~~~l~~L~p~t~Y~vqVRa~~ 201 (227)
T 1eer_B 179 RTECVLSNLRGRTRYTFAVRARM 201 (227)
T ss_dssp CCEEEECCCCSSCEEEEEEEEEE
T ss_pred ceEEEEcccCCCCeEEEEEEEeE
Confidence 45789999999999999999885
No 103
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=28.83 E-value=47 Score=23.90 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=22.4
Q ss_pred CCCC-cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9258 9 RMFP-SLQLQVSGLDQAAHYSLLVEFHLAS 37 (163)
Q Consensus 9 ~~FP-~l~~~v~GL~p~~~Y~i~l~~~~~d 37 (163)
|++| .+.|.+.. +++..|.|.|||..+.
T Consensus 61 R~~~~~~tY~f~v-~~~G~Y~VrLhF~ei~ 89 (174)
T 2jwp_A 61 RYNEDSFGYDIPI-KEEGEYVLVLKFAEVY 89 (174)
T ss_dssp CCCCSCEEEEEEC-CSCEEEEEEEEEECCS
T ss_pred ccCCCCeEEEEEe-CCCeEEEEEEEEeccc
Confidence 3455 78999985 5778999999999864
No 104
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=28.46 E-value=39 Score=25.66 Aligned_cols=24 Identities=13% Similarity=0.177 Sum_probs=20.5
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEE
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
....|.|.||.|...|.+.|.-.-
T Consensus 258 ~~~~~~l~~L~p~t~Y~~rV~A~n 281 (303)
T 1i1r_A 258 TRSSFTVQDLKPFTEYVFRIRCMK 281 (303)
T ss_dssp CCSEEEECSCCTTCEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEecc
Confidence 456899999999999998887665
No 105
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=28.24 E-value=38 Score=25.12 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=20.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-..
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~ 89 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVR 89 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCEEEecCCCCCCEEEEEEEEEC
Confidence 56899999999999999998765
No 106
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=28.05 E-value=46 Score=23.02 Aligned_cols=36 Identities=11% Similarity=0.067 Sum_probs=25.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEccCcceEecc---cccc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLASPHKYKYKT---SWEP 49 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk~~~---~W~~ 49 (163)
.+.+.++||+|..-|.+...-... +...-+.. .|.-
T Consensus 18 ~VtV~~tGl~p~~~y~v~~Ca~~~-~~~~~Cd~~~~~~it 56 (113)
T 1noa_A 18 VVKVAGAGLQAGTAYDVGQCAWVD-TGVLACNPADFSSVT 56 (113)
T ss_dssp EEEEEEESCCTTCEEEEEEEEEEE-TTEEEECGGGCEEEE
T ss_pred EEEEEEEccCCCCeEEEEEccccC-CCCCCcCccceeeEE
Confidence 457889999999999988876654 34444422 5765
No 107
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=27.92 E-value=47 Score=22.96 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=25.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEccCcceEecc---cccc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLASPHKYKYKT---SWEP 49 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~d~~ryk~~~---~W~~ 49 (163)
.+.+.++||+|..-|.+...-... +....+.. .|.-
T Consensus 17 ~VtV~~tGl~p~~~y~v~~Ca~~~-~~~~~Cd~~~~~~it 55 (112)
T 2mcm_A 17 TVTVSATGLTPGTVYHVGQCAVVE-PGVIGCDATTSTDVT 55 (112)
T ss_dssp EEEEEEESCCTTCEEEEEEEEEEE-TTEEEEETTTCEEEE
T ss_pred EEEEEEEccCCCCeEEEEEccccC-CCCCCcCccceeEEE
Confidence 457889999999999988876654 34444432 5665
No 108
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=27.12 E-value=51 Score=24.49 Aligned_cols=23 Identities=22% Similarity=0.274 Sum_probs=18.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 14 LQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 14 l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
..+.|.||+|...|.+.++..-.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~ 195 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVP 195 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECS
T ss_pred cEEEEecCCCCCcEEEEEEEEEc
Confidence 35667899999999999988643
No 109
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=27.10 E-value=58 Score=24.02 Aligned_cols=25 Identities=12% Similarity=0.147 Sum_probs=21.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLAS 37 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~d 37 (163)
...+.+.||+|+..|.+-|+-.+..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~ 188 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQ 188 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESC
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCC
Confidence 4578899999999999999988754
No 110
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=27.09 E-value=43 Score=25.59 Aligned_cols=24 Identities=29% Similarity=0.368 Sum_probs=20.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
...|.|.||.|...|.+.|.-...
T Consensus 265 ~~~~~l~~L~p~t~Y~~rVra~~~ 288 (313)
T 2d9q_B 265 ALQYELCGLLPATAYTLQIRCIRW 288 (313)
T ss_dssp EEEEEECSCCSCCCEEEEEEEEEC
T ss_pred ceEEEEeCCCCCCeEEEEEEeeEC
Confidence 457999999999999999986653
No 111
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=27.08 E-value=39 Score=25.29 Aligned_cols=23 Identities=13% Similarity=0.249 Sum_probs=19.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|...|.+.|.-.-
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n 186 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLN 186 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 45799999999999999987643
No 112
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=26.96 E-value=42 Score=25.09 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=21.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLAS 37 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~d 37 (163)
...+.|.||+|...|.+-|+-...+
T Consensus 194 ~~~~~l~~L~p~t~Y~vqVRa~~~~ 218 (236)
T 1axi_B 194 TTSVPVYSLKVDKEYEVRVRSKQRN 218 (236)
T ss_dssp SSEEEEEEEETTSCEEEEEEEEETT
T ss_pred CCEEEEeccCCCCEEEEEEEEEECC
Confidence 4779999999999999999877643
No 113
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=26.36 E-value=40 Score=25.22 Aligned_cols=23 Identities=35% Similarity=0.262 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a~~ 95 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYALK 95 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEe
Confidence 56899999999999999887764
No 114
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=26.18 E-value=41 Score=26.13 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=20.9
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
+.-.+.|.||+|...|.+.+.-.-.
T Consensus 157 ~~~~~~l~~L~p~t~Y~~~V~A~~~ 181 (306)
T 3s98_A 157 IYSRHKIYKLSPETTYCLKVKAALL 181 (306)
T ss_dssp ECTEEEECSCCTTCEEEEEEEEEEG
T ss_pred ccceEEEccCCCCCeEEEEEEEEEc
Confidence 3457899999999999999987763
No 115
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=25.19 E-value=43 Score=26.01 Aligned_cols=23 Identities=9% Similarity=0.137 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 330 ~~~~~i~~L~p~t~Y~~~V~A~~ 352 (375)
T 3t1w_A 330 RNSITLTNLTPGTEYVVSIVALN 352 (375)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEC
Confidence 45789999999999999887665
No 116
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=24.60 E-value=78 Score=23.97 Aligned_cols=24 Identities=13% Similarity=0.308 Sum_probs=20.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHLA 36 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~~ 36 (163)
...|.+.||+|...|.+.|+-...
T Consensus 188 ~~~~~l~~L~p~~~Y~vqVR~k~~ 211 (247)
T 2erj_C 188 RHKFSLPSVDGQKRYTFRVRSRFN 211 (247)
T ss_dssp SCEEEESCCCTTSCEEEEEEEEEC
T ss_pred ceEEEecCCCCCCEEEEEEEEEeC
Confidence 357899999999999999997664
No 117
>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*
Probab=24.59 E-value=57 Score=24.51 Aligned_cols=21 Identities=10% Similarity=0.178 Sum_probs=17.3
Q ss_pred eEEEeCCCCCCCeeEEEEEEE
Q psy9258 15 QLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 15 ~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
.+.|.+|+|+..|.+.++..-
T Consensus 168 ~~~l~~L~p~t~YCv~v~~~~ 188 (211)
T 3dlq_R 168 EYEFFGLTPDTEFLGTIMILV 188 (211)
T ss_dssp EEEEESCCTTCEEEEEEEEEE
T ss_pred EEEEccCCCCCcEEEEEEEEE
Confidence 566779999999999988744
No 118
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=24.42 E-value=26 Score=23.37 Aligned_cols=23 Identities=22% Similarity=0.249 Sum_probs=19.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-.-
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n 84 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFA 84 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEc
Confidence 57899999999999998776544
No 119
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=22.08 E-value=68 Score=25.82 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=22.0
Q ss_pred CcceEEEeCCCCCCCeeEEEEEEEcc
Q psy9258 12 PSLQLQVSGLDQAAHYSLLVEFHLAS 37 (163)
Q Consensus 12 P~l~~~v~GL~p~~~Y~i~l~~~~~d 37 (163)
+.-.+.|.||+|+..|.+.|+-...+
T Consensus 375 ~~~~~~l~~L~p~t~Y~~qVRa~~~~ 400 (419)
T 2gys_A 375 NAHSMALPALEPSTRYWARVRVRTSR 400 (419)
T ss_dssp SCSEEECCCCCSSCCCEEEEEEEECC
T ss_pred cccEEEeccCCCCCeEEEEEEEEEcC
Confidence 34678999999999999999987754
No 120
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=21.30 E-value=63 Score=25.01 Aligned_cols=23 Identities=13% Similarity=0.069 Sum_probs=20.1
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.++||.|...|.+.|.-..
T Consensus 58 ~~~~~i~~L~p~t~Y~~~V~a~~ 80 (375)
T 3t1w_A 58 QSSCTFDNLSPGLEYNVSVYTVK 80 (375)
T ss_dssp CCEEEECCCCTTCCEEEEEEEEE
T ss_pred ccEEEEcCCcCCCEEEEEEEEEc
Confidence 46899999999999999998764
No 121
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=20.71 E-value=65 Score=24.81 Aligned_cols=23 Identities=9% Similarity=0.137 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.+.||.|...|.+.|.-.-
T Consensus 238 ~~~~~i~~L~p~t~Y~~~V~A~n 260 (368)
T 1fnf_A 238 RNSITLTNLTPGTEYVVSIVALN 260 (368)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEe
Confidence 45799999999999999887764
No 122
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=20.35 E-value=67 Score=24.75 Aligned_cols=23 Identities=0% Similarity=-0.164 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9258 13 SLQLQVSGLDQAAHYSLLVEFHL 35 (163)
Q Consensus 13 ~l~~~v~GL~p~~~Y~i~l~~~~ 35 (163)
...|.|.||.|...|.+.|.-..
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n 277 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQE 277 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEE
T ss_pred ceEEEEeCCCCCCeEEEEEEEec
Confidence 35789999999999999988765
No 123
>1je5_A Helix-destabilizing protein; OB-fold, beta barrel, DNA binding protein; 1.90A {Enterobacteria phage T7} SCOP: b.40.4.7
Probab=20.15 E-value=69 Score=24.42 Aligned_cols=36 Identities=8% Similarity=0.145 Sum_probs=28.5
Q ss_pred eEecCCCC-CCCcceEEEeC-----C-CCCCCeeEEEEEEEcc
Q psy9258 2 IITKTGRR-MFPSLQLQVSG-----L-DQAAHYSLLVEFHLAS 37 (163)
Q Consensus 2 ivtk~GR~-~FP~l~~~v~G-----L-~p~~~Y~i~l~~~~~d 37 (163)
++|..|.+ .||.|.=--+| . +|+..|++.|-+-.-|
T Consensus 6 ~tTp~g~~~~Y~~l~eP~~~~~~gg~~~~~gkYsv~liipk~d 48 (206)
T 1je5_A 6 FTSALGTAEPYAYIAKPDYGNEERGFGNPRGVYKVDLTIPNKD 48 (206)
T ss_dssp EECCSEEECSSCEEEEEECCC---CCSCCSCEEEEEEEEETTS
T ss_pred EecCceeEeecceecCCcccccccCcCCCCCcEEEEEEEcCcc
Confidence 57888988 89987654454 4 8888999999998766
Done!