Your job contains 1 sequence.
>psy9260
MIHNKTQQSVEESQIYLFVHLLKSRLKQEKASGFEESMKYKKLTNAQRSGLNQIPNRRFT
LWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ
HSINFSPLMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYP
SPTGVLIAIDLAYNLHRYIDYPVSAMMNCVGVLKSVV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9260
(217 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ASPGD|ASPL0000077099 - symbol:prp8 species:162425 "Emeric... 463 2.2e-68 2
CGD|CAL0002209 - symbol:PRP8 species:5476 "Candida albica... 448 1.9e-63 2
FB|FBgn0033688 - symbol:Prp8 "pre-mRNA processing factor ... 485 1.6e-44 1
TAIR|locus:2141791 - symbol:AT4G38780 species:3702 "Arabi... 481 4.0e-44 1
UNIPROTKB|F1RHH8 - symbol:PRPF8 "Uncharacterized protein"... 480 4.8e-44 1
UNIPROTKB|E1BZT5 - symbol:PRPF8 "Uncharacterized protein"... 480 5.1e-44 1
UNIPROTKB|A7Z025 - symbol:PRPF8 "PRPF8 protein" species:9... 480 5.1e-44 1
UNIPROTKB|E2R4X9 - symbol:PRPF8 "Uncharacterized protein"... 480 5.1e-44 1
UNIPROTKB|Q6P2Q9 - symbol:PRPF8 "Pre-mRNA-processing-spli... 480 5.1e-44 1
MGI|MGI:2179381 - symbol:Prpf8 "pre-mRNA processing facto... 480 5.1e-44 1
UNIPROTKB|G3V6H2 - symbol:Prpf8 "Pre-mRNA processing fact... 480 5.1e-44 1
ZFIN|ZDB-GENE-030131-577 - symbol:prpf8 "pre-mRNA process... 480 5.1e-44 1
WB|WBGene00004187 - symbol:prp-8 species:6239 "Caenorhabd... 477 1.1e-43 1
DICTYBASE|DDB_G0274229 - symbol:prpf8 "putative U5 small ... 473 2.8e-43 1
UNIPROTKB|G4N5D4 - symbol:MGG_05244 "Pre-mRNA-processing-... 472 3.7e-43 1
POMBASE|SPAC4F8.12c - symbol:spp42 "U5 snRNP complex subu... 465 2.0e-42 1
SGD|S000001208 - symbol:PRP8 "Component of the U4/U6-U5 s... 444 3.6e-40 1
>ASPGD|ASPL0000077099 [details] [associations]
symbol:prp8 species:162425 "Emericella nidulans"
[GO:0016539 "intein-mediated protein splicing" evidence=IDA]
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR000555 InterPro:IPR004042
InterPro:IPR007868 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF05203 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
PROSITE:PS50819 SMART:SM00232 GO:GO:0005681 GO:GO:0004519
EMBL:BN001303 GO:GO:0000398 EMBL:AACD01000078 KO:K12856
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 OrthoDB:EOG4Q2HPK OMA:WAPHPFN RefSeq:XP_662127.1
ProteinModelPortal:Q5B4K7 SMR:Q5B4K7 STRING:Q5B4K7
EnsemblFungi:CADANIAT00005917 GeneID:2872315 KEGG:ani:AN4523.2
GO:GO:0030908 Uniprot:Q5B4K7
Length = 2945
Score = 463 (168.0 bits), Expect = 2.2e-68, Sum P(2) = 2.2e-68
Identities = 85/89 (95%), Positives = 89/89 (100%)
Query: 32 SGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKI 91
SGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF+HGKI
Sbjct: 2117 SGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKI 2176
Query: 92 PTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
PTLKISLIQIFRAHLWQK+HES+VMDLCQ
Sbjct: 2177 PTLKISLIQIFRAHLWQKIHESVVMDLCQ 2205
Score = 284 (105.0 bits), Expect = 2.2e-68, Sum P(2) = 2.2e-68
Identities = 50/69 (72%), Positives = 62/69 (89%)
Query: 128 LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLI 187
++F ++D + TTT K+WLDVQLR+GDYDSHDIERY RAK+LDYTTD+MSIYPS TG++I
Sbjct: 2254 ILFDTKDVYEPTTTNKFWLDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMI 2313
Query: 188 AIDLAYNLH 196
AIDLAYNL+
Sbjct: 2314 AIDLAYNLY 2322
>CGD|CAL0002209 [details] [associations]
symbol:PRP8 species:5476 "Candida albicans" [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0030623 "U5 snRNA binding"
evidence=IEA] [GO:0000244 "assembly of spliceosomal tri-snRNP"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 CGD:CAL0002209 GO:GO:0005681 EMBL:AACQ01000073
EMBL:AACQ01000072 GO:GO:0000398 InterPro:IPR015425 SUPFAM:SSF101447
eggNOG:COG5178 KO:K12856 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
RefSeq:XP_716196.1 RefSeq:XP_716279.1 ProteinModelPortal:Q5A322
STRING:Q5A322 GeneID:3642125 GeneID:3642177 KEGG:cal:CaO19.13800
KEGG:cal:CaO19.6442 Uniprot:Q5A322
Length = 2416
Score = 448 (162.8 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 81/92 (88%), Positives = 89/92 (96%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFE+S+K+KKLTNAQR GL+QIPNRRFTLWWSPTINRANVYVGF VQLDLTGIF+H
Sbjct: 1582 EKASGFEDSLKFKKLTNAQRQGLSQIPNRRFTLWWSPTINRANVYVGFLVQLDLTGIFLH 1641
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HES+V D+CQ
Sbjct: 1642 GKIPTLKISLIQIFRAHLWQKIHESVVQDICQ 1673
Score = 250 (93.1 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 45/63 (71%), Positives = 54/63 (85%)
Query: 134 DTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAY 193
D M+ T +W+DVQLR+GDYDSHDI RYAR+KFLDYTTD MS YPSPTG++IAIDLAY
Sbjct: 1728 DKMEIPATT-FWIDVQLRYGDYDSHDISRYARSKFLDYTTDGMSSYPSPTGIIIAIDLAY 1786
Query: 194 NLH 196
N++
Sbjct: 1787 NMY 1789
>FB|FBgn0033688 [details] [associations]
symbol:Prp8 "pre-mRNA processing factor 8" species:7227
"Drosophila melanogaster" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS;IMP] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 EMBL:AE013599 GO:GO:0022008
GO:GO:0005682 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
eggNOG:COG5178 GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 RefSeq:NP_610735.1
UniGene:Dm.574 ProteinModelPortal:A1Z8U0 SMR:A1Z8U0 STRING:A1Z8U0
PaxDb:A1Z8U0 PRIDE:A1Z8U0 EnsemblMetazoa:FBtr0088016 GeneID:36304
KEGG:dme:Dmel_CG8877 UCSC:CG8877-RA CTD:36304 FlyBase:FBgn0033688
InParanoid:A1Z8U0 OrthoDB:EOG47D7WV PhylomeDB:A1Z8U0
GenomeRNAi:36304 NextBio:797832 Bgee:A1Z8U0 Uniprot:A1Z8U0
Length = 2396
Score = 485 (175.8 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 91/92 (98%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1564 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1623
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1624 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1655
Score = 346 (126.9 bits), Expect = 9.2e-30, P = 9.2e-30
Identities = 73/138 (52%), Positives = 99/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHES----IVMDL 118
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1636 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFPA 1694
Query: 119 CQHSINFSPLMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ +++ L+ ++DTMD+TTTQKYWLD+QLRWGDYDSHD+ERYARAKFLDYTTDNMSI
Sbjct: 1695 YKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSI 1754
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1755 YPSPTGVLIAIDLAYNLH 1772
>TAIR|locus:2141791 [details] [associations]
symbol:AT4G38780 species:3702 "Arabidopsis thaliana"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR000555
InterPro:IPR012591 InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082
Pfam:PF08083 ProDom:PD149576 SMART:SM00232 GO:GO:0009506
EMBL:CP002687 GO:GO:0005681 GO:GO:0000398 KO:K12856
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 IPI:IPI00520220
RefSeq:NP_195589.2 UniGene:At.31150 ProteinModelPortal:F4JUG5
SMR:F4JUG5 PRIDE:F4JUG5 EnsemblPlants:AT4G38780.1 GeneID:830033
KEGG:ath:AT4G38780 OMA:STTISPY ArrayExpress:F4JUG5 Uniprot:F4JUG5
Length = 2332
Score = 481 (174.4 bits), Expect = 4.0e-44, P = 4.0e-44
Identities = 89/92 (96%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI+MH
Sbjct: 1503 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIYMH 1562
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HES+VMDLCQ
Sbjct: 1563 GKIPTLKISLIQIFRAHLWQKIHESVVMDLCQ 1594
Score = 298 (110.0 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 67/138 (48%), Positives = 90/138 (65%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + V +DL + + ++ L+I +Q H + K++ S V+
Sbjct: 1575 IFRAHLWQKIHESVVMDLCQV-LDQELEPLEIETVQKETIHPRKSYKMNSSCADVLLFAA 1633
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
H S P L+ S+D D + KYW+DVQLRWGDYDSHDIERY +AKF+DYTTDNMSI
Sbjct: 1634 HKWPMSKPSLIAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTKAKFMDYTTDNMSI 1693
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGV+I +DLAYNLH
Sbjct: 1694 YPSPTGVIIGLDLAYNLH 1711
>UNIPROTKB|F1RHH8 [details] [associations]
symbol:PRPF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 GO:GO:0005681 GO:GO:0000398
GeneTree:ENSGT00390000015210 OMA:EEFTHRD InterPro:IPR012984
InterPro:IPR021983 InterPro:IPR019581 InterPro:IPR019580
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 Pfam:PF10596 EMBL:FP312656 Ensembl:ENSSSCT00000019391
Uniprot:F1RHH8
Length = 2240
Score = 480 (174.0 bits), Expect = 4.8e-44, P = 4.8e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1407 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1466
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1467 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1498
Score = 349 (127.9 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1479 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1537
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1538 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1597
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1598 YPSPTGVLIAIDLAYNLH 1615
>UNIPROTKB|E1BZT5 [details] [associations]
symbol:PRPF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 CTD:10594 EMBL:AADN02025906
IPI:IPI00583105 RefSeq:XP_415805.2 PRIDE:E1BZT5
Ensembl:ENSGALT00000004650 GeneID:417559 KEGG:gga:417559
NextBio:20820843 Uniprot:E1BZT5
Length = 2335
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1504 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1563
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1564 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1595
Score = 349 (127.9 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1576 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1634
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1635 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1694
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1695 YPSPTGVLIAIDLAYNLH 1712
>UNIPROTKB|A7Z025 [details] [associations]
symbol:PRPF8 "PRPF8 protein" species:9913 "Bos taurus"
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 GO:GO:0000398 GO:GO:0071013 eggNOG:COG5178
GeneTree:ENSGT00390000015210 HOGENOM:HOG000184103 KO:K12856
OMA:EEFTHRD InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
CTD:10594 HOVERGEN:HBG052796 OrthoDB:EOG45HRWF EMBL:DAAA02048662
EMBL:BC153223 IPI:IPI00687395 RefSeq:NP_001099108.1
UniGene:Bt.44664 SMR:A7Z025 STRING:A7Z025
Ensembl:ENSBTAT00000046260 GeneID:507371 KEGG:bta:507371
InParanoid:A7Z025 NextBio:20868029 Uniprot:A7Z025
Length = 2335
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1504 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1563
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1564 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1595
Score = 349 (127.9 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1576 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1634
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1635 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1694
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1695 YPSPTGVLIAIDLAYNLH 1712
>UNIPROTKB|E2R4X9 [details] [associations]
symbol:PRPF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 CTD:10594 EMBL:AAEX03006697
EMBL:AAEX03006696 RefSeq:XP_854384.1 ProteinModelPortal:E2R4X9
Ensembl:ENSCAFT00000030519 GeneID:480651 KEGG:cfa:480651
Uniprot:E2R4X9
Length = 2335
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1504 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1563
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1564 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1595
Score = 349 (127.9 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1576 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1634
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1635 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1694
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1695 YPSPTGVLIAIDLAYNLH 1712
>UNIPROTKB|Q6P2Q9 [details] [associations]
symbol:PRPF8 "Pre-mRNA-processing-splicing factor 8"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=TAS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000555
InterPro:IPR012591 InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082
Pfam:PF08083 ProDom:PD149576 SMART:SM00232 EMBL:AF092565
GO:GO:0005654 GO:GO:0016607 Reactome:REACT_1675 GO:GO:0005682
GO:GO:0003723 Orphanet:791 GO:GO:0000398 GO:GO:0071013
eggNOG:COG5178 HOGENOM:HOG000184103 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 EMBL:AB007510 EMBL:BC064370
IPI:IPI00007928 RefSeq:NP_006436.3 UniGene:Hs.181368 PDB:3E9L
PDB:3ENB PDB:3LRU PDBsum:3E9L PDBsum:3ENB PDBsum:3LRU
ProteinModelPortal:Q6P2Q9 SMR:Q6P2Q9 DIP:DIP-29614N IntAct:Q6P2Q9
MINT:MINT-1131724 STRING:Q6P2Q9 PhosphoSite:Q6P2Q9 DMDM:67460824
PaxDb:Q6P2Q9 PeptideAtlas:Q6P2Q9 PRIDE:Q6P2Q9 DNASU:10594
Ensembl:ENST00000304992 Ensembl:ENST00000572621 GeneID:10594
KEGG:hsa:10594 UCSC:uc002fte.3 CTD:10594 GeneCards:GC17M001553
HGNC:HGNC:17340 HPA:CAB009941 HPA:CAB015457 MIM:600059 MIM:607300
neXtProt:NX_Q6P2Q9 PharmGKB:PA33815 HOVERGEN:HBG052796
InParanoid:Q6P2Q9 OrthoDB:EOG45HRWF ChiTaRS:PRPF8
EvolutionaryTrace:Q6P2Q9 GenomeRNAi:10594 NextBio:40233
ArrayExpress:Q6P2Q9 Bgee:Q6P2Q9 CleanEx:HS_PRPF8
Genevestigator:Q6P2Q9 GermOnline:ENSG00000174231 Uniprot:Q6P2Q9
Length = 2335
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1504 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1563
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1564 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1595
Score = 349 (127.9 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1576 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1634
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1635 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1694
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1695 YPSPTGVLIAIDLAYNLH 1712
>MGI|MGI:2179381 [details] [associations]
symbol:Prpf8 "pre-mRNA processing factor 8" species:10090
"Mus musculus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 MGI:MGI:2179381 GO:GO:0016607 GO:GO:0003723
GO:GO:0000398 GO:GO:0071013 EMBL:AL591496 eggNOG:COG5178
GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 CTD:10594 HOVERGEN:HBG052796
OrthoDB:EOG45HRWF ChiTaRS:PRPF8 EMBL:AB047391 EMBL:BC034648
EMBL:BC054103 EMBL:BC093481 EMBL:AK041017 IPI:IPI00121596
RefSeq:NP_619600.2 UniGene:Mm.3757 ProteinModelPortal:Q99PV0
SMR:Q99PV0 IntAct:Q99PV0 STRING:Q99PV0 PhosphoSite:Q99PV0
PaxDb:Q99PV0 PRIDE:Q99PV0 DNASU:192159 Ensembl:ENSMUST00000018449
Ensembl:ENSMUST00000102510 GeneID:192159 KEGG:mmu:192159
UCSC:uc007kdx.1 InParanoid:A5D6Q4 NextBio:371143 Bgee:Q99PV0
CleanEx:MM_PRPF8 Genevestigator:Q99PV0
GermOnline:ENSMUSG00000020850 Uniprot:Q99PV0
Length = 2335
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1504 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1563
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1564 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1595
Score = 349 (127.9 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1576 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1634
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1635 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1694
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1695 YPSPTGVLIAIDLAYNLH 1712
>UNIPROTKB|G3V6H2 [details] [associations]
symbol:Prpf8 "Pre-mRNA processing factor 8, isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 RGD:1305467 GO:GO:0005681
EMBL:CH473948 GO:GO:0000398 GeneTree:ENSGT00390000015210 KO:K12856
OMA:EEFTHRD InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
CTD:10594 RefSeq:NP_001178519.1 UniGene:Rn.106432
ProteinModelPortal:G3V6H2 SMR:G3V6H2 PRIDE:G3V6H2
Ensembl:ENSRNOT00000005016 GeneID:287530 KEGG:rno:287530
NextBio:626419 Uniprot:G3V6H2
Length = 2335
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1504 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1563
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1564 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1595
Score = 349 (127.9 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 77/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1576 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1634
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQKYW+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1635 YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1694
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1695 YPSPTGVLIAIDLAYNLH 1712
>ZFIN|ZDB-GENE-030131-577 [details] [associations]
symbol:prpf8 "pre-mRNA processing factor 8"
species:7955 "Danio rerio" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 ZFIN:ZDB-GENE-030131-577 GO:GO:0005681 GO:GO:0000398
GeneTree:ENSGT00390000015210 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
EMBL:CR522882 IPI:IPI00932332 PRIDE:F1R7P3
Ensembl:ENSDART00000134601 ArrayExpress:F1R7P3 Bgee:F1R7P3
Uniprot:F1R7P3
Length = 2342
Score = 480 (174.0 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 90/92 (97%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1511 EKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1570
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIVMDLCQ
Sbjct: 1571 GKIPTLKISLIQIFRAHLWQKIHESIVMDLCQ 1602
Score = 345 (126.5 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 76/138 (55%), Positives = 98/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + + +DL +F ++ L+I +Q H + K++ S ++
Sbjct: 1583 IFRAHLWQKIHESIVMDLCQVFDQ-ELDALEIETVQKETIHPRKSYKMNSSCADILLFAS 1641
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P L+ S+D MDSTTTQK+W+D+QLRWGDYDSHDIERYARAKFLDYTTDNMSI
Sbjct: 1642 YKWNVSRPSLLADSKDVMDSTTTQKFWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI 1701
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNLH
Sbjct: 1702 YPSPTGVLIAIDLAYNLH 1719
>WB|WBGene00004187 [details] [associations]
symbol:prp-8 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0018996 GO:GO:0005681 GO:GO:0003723 GO:GO:0040035
GO:GO:0000398 EMBL:FO080718 PIR:S44625 RefSeq:NP_498785.1 PDB:2P87
PDB:2P8R PDBsum:2P87 PDBsum:2P8R ProteinModelPortal:P34369
SMR:P34369 DIP:DIP-27427N MINT:MINT-1103137 STRING:P34369
PaxDb:P34369 PRIDE:P34369 EnsemblMetazoa:C50C3.6 GeneID:176153
KEGG:cel:CELE_C50C3.6 UCSC:C50C3.6 CTD:176153 WormBase:C50C3.6
eggNOG:COG5178 GeneTree:ENSGT00390000015210 HOGENOM:HOG000184103
InParanoid:P34369 KO:K12856 OMA:EEFTHRD EvolutionaryTrace:P34369
NextBio:891352 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
Uniprot:P34369
Length = 2329
Score = 477 (173.0 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 88/92 (95%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
E+ASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
Sbjct: 1497 ERASGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 1556
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HES+VMDLCQ
Sbjct: 1557 GKIPTLKISLIQIFRAHLWQKIHESVVMDLCQ 1588
Score = 352 (129.0 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 80/138 (57%), Positives = 99/138 (71%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + V +DL +F ++ L+I +Q H + K++ S V+ Q
Sbjct: 1569 IFRAHLWQKIHESVVMDLCQVFDQ-ELDALEIQTVQKETIHPRKSYKMNSSCADVLLFAQ 1627
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ N S P LM S+D MD+TTTQKYWLDVQLRWGDYDSHD+ERYARAKFLDYTTDNMSI
Sbjct: 1628 YKWNVSRPSLMADSKDVMDNTTTQKYWLDVQLRWGDYDSHDVERYARAKFLDYTTDNMSI 1687
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGVLIAIDLAYNL+
Sbjct: 1688 YPSPTGVLIAIDLAYNLY 1705
>DICTYBASE|DDB_G0274229 [details] [associations]
symbol:prpf8 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA;ISS] [GO:0006397 "mRNA processing" evidence=IEA;ISS]
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 dictyBase:DDB_G0274229 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0005682
GO:GO:0003723 EMBL:AAFI02000012 GO:GO:0000398 eggNOG:COG5178
KO:K12856 OMA:EEFTHRD InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
RefSeq:XP_644240.1 ProteinModelPortal:Q8T295 SMR:Q8T295
STRING:Q8T295 PRIDE:Q8T295 EnsemblProtists:DDB0233128
GeneID:8619668 KEGG:ddi:DDB_G0274229 ProtClustDB:CLSZ2428995
Uniprot:Q8T295
Length = 2327
Score = 473 (171.6 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 88/92 (95%), Positives = 91/92 (98%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMKYKKLT+AQRSGLNQIPNRRFTLWWSPTINR NVYVGFQVQLDLTGIFMH
Sbjct: 1493 EKASGFEESMKYKKLTHAQRSGLNQIPNRRFTLWWSPTINRKNVYVGFQVQLDLTGIFMH 1552
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HES+VMDLCQ
Sbjct: 1553 GKIPTLKISLIQIFRAHLWQKIHESLVMDLCQ 1584
Score = 293 (108.2 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 80 LDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESIVMDLCQ--HSINFS-P-LMFISR 133
+DL +F ++ L+IS++ H + K++ S L + H S P L+ +R
Sbjct: 1580 MDLCQVFDQ-ELDNLEISVVNKEAIHPRKSYKMNSSCADILLRATHKWQVSRPSLLNDNR 1638
Query: 134 DTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAY 193
DT D+TTTQ YWLDVQL+WGD+DSHDIERY+RAKFLDYTTD+MS+YPSPTG LI +DLAY
Sbjct: 1639 DTYDNTTTQ-YWLDVQLKWGDFDSHDIERYSRAKFLDYTTDSMSLYPSPTGCLIGLDLAY 1697
Query: 194 NLH 196
N++
Sbjct: 1698 NIY 1700
>UNIPROTKB|G4N5D4 [details] [associations]
symbol:MGG_05244 "Pre-mRNA-processing-splicing factor 8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000555
InterPro:IPR012591 InterPro:IPR012592 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 EMBL:CM001233 GO:GO:0005681
GO:GO:0000398 KO:K12856 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
RefSeq:XP_003712798.1 ProteinModelPortal:G4N5D4 SMR:G4N5D4
EnsemblFungi:MGG_05244T0 GeneID:2675312 KEGG:mgr:MGG_05244
Uniprot:G4N5D4
Length = 2373
Score = 472 (171.2 bits), Expect = 3.7e-43, P = 3.7e-43
Identities = 87/92 (94%), Positives = 92/92 (100%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGL+QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF+H
Sbjct: 1539 EKASGFEESMKFKKLTNAQRSGLSQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLH 1598
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HES+VMDLCQ
Sbjct: 1599 GKIPTLKISLIQIFRAHLWQKIHESVVMDLCQ 1630
Score = 281 (104.0 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 63/137 (45%), Positives = 93/137 (67%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQ 120
I RA+++ + V +DL +F ++ +L I Q H + K++ S +
Sbjct: 1611 IFRAHLWQKIHESVVMDLCQVFDQ-ELESLGIETCQKETIHPRKSYKMNSSCADIQLFAT 1669
Query: 121 HSINFS-P-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
H N + P ++F ++DT+++T+T K+W+DVQLR+GDYDSHDIERY RAK+LDYTTD+MS+
Sbjct: 1670 HKWNVTRPSMLFDTKDTIENTSTSKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSL 1729
Query: 179 YPSPTGVLIAIDLAYNL 195
YPS TG+L+ IDLAYNL
Sbjct: 1730 YPSATGLLLGIDLAYNL 1746
Score = 37 (18.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 18 FVHLLKSRLKQEKASGFEESMK 39
++ + ++R +++ SGF E+ K
Sbjct: 60 WLRMQRNRFGEKRKSGFVETQK 81
>POMBASE|SPAC4F8.12c [details] [associations]
symbol:spp42 "U5 snRNP complex subunit Spp42"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 PomBase:SPAC4F8.12c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0005682 GO:GO:0003723
GO:GO:0004843 GO:GO:0046540 GO:GO:0000393 eggNOG:COG5178
HOGENOM:HOG000184103 KO:K12856 InterPro:IPR012984
InterPro:IPR021983 InterPro:IPR019581 InterPro:IPR019580
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 Pfam:PF10596 OrthoDB:EOG4Q2HPK PIR:T38841
RefSeq:NP_593861.1 ProteinModelPortal:O14187 SMR:O14187
IntAct:O14187 STRING:O14187 PRIDE:O14187 EnsemblFungi:SPAC4F8.12c.1
GeneID:2543413 KEGG:spo:SPAC4F8.12c OMA:WAPHPFN NextBio:20804428
Uniprot:O14187
Length = 2363
Score = 465 (168.7 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 86/92 (93%), Positives = 90/92 (97%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFEESMK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI MH
Sbjct: 1528 EKASGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIMMH 1587
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFR+HLWQK+HES+V DLCQ
Sbjct: 1588 GKIPTLKISLIQIFRSHLWQKIHESVVWDLCQ 1619
Score = 290 (107.1 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 61/113 (53%), Positives = 81/113 (71%)
Query: 90 KIPTLKISLIQIFRAHLWQ--KVHESI--VMDLCQHSINFS-P-LMFISRDTMDSTTTQK 143
++ +L+I +Q H + K++ S ++ L + N S P L+ +RD +D+TTT K
Sbjct: 1624 ELESLQIETVQKETIHPRKSYKMNSSCADILLLAAYKWNVSRPSLLNDNRDVLDNTTTNK 1683
Query: 144 YWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLH 196
YW+DVQLR+GDYDSHDIERY RAKFLDY+TD S+YPSPTGVLI IDL YN+H
Sbjct: 1684 YWIDVQLRFGDYDSHDIERYTRAKFLDYSTDAQSMYPSPTGVLIGIDLCYNMH 1736
>SGD|S000001208 [details] [associations]
symbol:PRP8 "Component of the U4/U6-U5 snRNP complex"
species:4932 "Saccharomyces cerevisiae" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000350 "generation of catalytic spliceosome for
second transesterification step" evidence=IMP] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IDA]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0030623 "U5 snRNA
binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF08082 Pfam:PF08083 ProDom:PD149576 SMART:SM00232
SGD:S000001208 EMBL:BK006934 GO:GO:0005681 GO:GO:0005682
GO:GO:0000244 PDB:3SBT PDBsum:3SBT EMBL:U00027 GO:GO:0046540
GO:GO:0000389 eggNOG:COG5178 GeneTree:ENSGT00390000015210
HOGENOM:HOG000184103 KO:K12856 OMA:EEFTHRD InterPro:IPR012984
InterPro:IPR021983 InterPro:IPR019581 InterPro:IPR019580
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 Pfam:PF10596 EMBL:Z24732 EMBL:L29421 PIR:S34670
RefSeq:NP_012035.1 PDB:2OG4 PDB:3E66 PDB:3E9O PDB:3E9P PDB:3SBG
PDBsum:2OG4 PDBsum:3E66 PDBsum:3E9O PDBsum:3E9P PDBsum:3SBG
ProteinModelPortal:P33334 SMR:P33334 DIP:DIP-2427N IntAct:P33334
MINT:MINT-599605 STRING:P33334 PaxDb:P33334 PRIDE:P33334
EnsemblFungi:YHR165C GeneID:856570 KEGG:sce:YHR165C CYGD:YHR165c
OrthoDB:EOG4Q2HPK EvolutionaryTrace:P33334 NextBio:982414
Genevestigator:P33334 GermOnline:YHR165C GO:GO:0030623
Uniprot:P33334
Length = 2413
Score = 444 (161.4 bits), Expect = 3.6e-40, P = 3.6e-40
Identities = 81/92 (88%), Positives = 90/92 (97%)
Query: 29 EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH 88
EKASGFE+SM++KKLT+AQR+GL+QIPNRRFTLWWSPTINRANVYVGF VQLDLTGIF+H
Sbjct: 1576 EKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRANVYVGFLVQLDLTGIFLH 1635
Query: 89 GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQ 120
GKIPTLKISLIQIFRAHLWQK+HESIV D+CQ
Sbjct: 1636 GKIPTLKISLIQIFRAHLWQKIHESIVFDICQ 1667
Score = 260 (96.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 59/138 (42%), Positives = 83/138 (60%)
Query: 67 INRANVY--VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVH-ESIVMDLCQHSI 123
I RA+++ + + D+ I + G++ L+I + H + S D+ S+
Sbjct: 1648 IFRAHLWQKIHESIVFDICQI-LDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESV 1706
Query: 124 N----FSP-LMFISRDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSI 178
+ P L+ + D+ T K W DVQLR+GDYDSHDI RY RAKFLDYTTDN+S+
Sbjct: 1707 HEWEVSKPSLLHETNDSFKGLITNKMWFDVQLRYGDYDSHDISRYVRAKFLDYTTDNVSM 1766
Query: 179 YPSPTGVLIAIDLAYNLH 196
YPSPTGV+I IDLAYN++
Sbjct: 1767 YPSPTGVMIGIDLAYNMY 1784
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 217 217 0.00090 112 3 11 22 0.46 32
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 603 (64 KB)
Total size of DFA: 186 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.04u 0.09s 19.13t Elapsed: 00:00:11
Total cpu time: 19.04u 0.09s 19.13t Elapsed: 00:00:12
Start: Thu Aug 15 13:25:56 2013 End: Thu Aug 15 13:26:08 2013