BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9269
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2PYH4|HFM1_HUMAN Probable ATP-dependent DNA helicase HFM1 OS=Homo sapiens GN=HFM1
PE=2 SV=2
Length = 1435
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
++Y +++ R+ VESSLHRHL+EHLN+EIVL TI+DV++AVEW+RST ++R L NP HY
Sbjct: 676 DKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHY 735
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++++LQ LC++ LN LS +LI M++G + PT G +MA + I F
Sbjct: 736 GFASGLNKDGIEAKLQ----ELCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYYITF 791
Query: 121 NTMVAF 126
T+ F
Sbjct: 792 ETVKKF 797
>sp|A2RUV5|HFM1_XENTR Probable ATP-dependent DNA helicase HFM1 OS=Xenopus tropicalis
GN=hfm1 PE=2 SV=1
Length = 1336
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 86/126 (68%), Gaps = 4/126 (3%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E+Y +++G + +ESSLH+HLVEHLN+EI L TI+DV VA+EW+RSTF ++R L NP +Y
Sbjct: 545 EKYVHMLDGADTIESSLHKHLVEHLNAEIALHTITDVKVALEWIRSTFLYIRALKNPAYY 604
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF GL ++++LQ LC++ LN LS LI M++ + PT TG +MA + I F
Sbjct: 605 GFSEGLDKIGIEAKLQ----ELCLKNLNDLSSLGLIKMDEEINFKPTETGKLMALYYIAF 660
Query: 121 NTMVAF 126
NT F
Sbjct: 661 NTAKLF 666
>sp|P51979|HFM1_YEAST ATP-dependent DNA helicase MER3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HFM1 PE=1 SV=3
Length = 1187
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ YE L+ G + +ESSLH +L+EHL +E L+T+ + AV WLR+TFF+VR NP Y
Sbjct: 514 QTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYSIETAVNWLRNTFFYVRFGKNPAAY 573
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
S S + + C L+ L + +I +++G + T G+ M + I F
Sbjct: 574 QEVNRYVS--FHSVEDSQINQFCQYLLDTLVKVKIIDISNG-EYKSTAYGNAMTRHYISF 630
Query: 121 NTMVAFTGWEKAQKDLALLTTLP-LATS 147
+M F A+K L+L L LATS
Sbjct: 631 ESMKQFIN---AKKFLSLQGILNLLATS 655
>sp|Q9VUV9|U520_DROME Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
OS=Drosophila melanogaster GN=CG5931 PE=2 SV=4
Length = 2142
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + P+ES L + +H N+E+V KTI + AV++L TF + R+ NP +Y
Sbjct: 1713 FKKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G++ L L S L L+ L + I++ D D LP G I A + I + T
Sbjct: 1773 -QGVTHRHLSDHL----SELVENTLSDLEQSKCISVEDDMDTLPLNLGMIAAYYYINYTT 1827
Query: 123 MVAFT 127
+ F+
Sbjct: 1828 IELFS 1832
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L + LN+EIVL T+ + AV WL T+ ++R+L NP YG
Sbjct: 879 YLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGV 938
Query: 63 P-AGLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
+ ++ L Q R ++ C E +GL +Y+ T + F + T G I + + +
Sbjct: 939 SHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGH--FQV--TDLGRIASHYYLT 994
Query: 120 FNTMVAF 126
TM+ +
Sbjct: 995 HETMLTY 1001
>sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens
GN=SNRNP200 PE=1 SV=2
Length = 2136
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 12 PVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGFPAGLSSEEL 71
PVES L + +H N+EIV KTI + AV++L TF + R+ NP +Y G+S L
Sbjct: 1723 PVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL-QGISHRHL 1781
Query: 72 QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNTMVAFT 127
L S L + L+ L + I++ D D+ P G I A + I + T+ F+
Sbjct: 1782 SDHL----SELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFS 1833
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L + LN+EIVL + + AV WL + ++R+L +P YG
Sbjct: 879 YLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGI 938
Query: 63 P-AGLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
L + L Q RL ++ M + N L +Y+ T N F + T G I + + I
Sbjct: 939 SHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGN--FQV--TELGRIASHYYIT 994
Query: 120 FNTMVAF 126
+T+ +
Sbjct: 995 NDTVQTY 1001
>sp|Q54G57|HELC1_DICDI Activating signal cointegrator 1 complex subunit 3 OS=Dictyostelium
discoideum GN=ascc3 PE=3 SV=1
Length = 2195
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ Y L+ P+ES +L +HLN+EIVL T+S+V+ AV WL T+ F+R+L NP Y
Sbjct: 876 DHYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYTYLFIRMLQNPLVY 935
Query: 61 GFPAGLSSEELQ 72
G P+ S++ Q
Sbjct: 936 GIPSSQRSKDPQ 947
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVES L L +HLN+EIV TI A+ +L +TFFF R++ +P +YG
Sbjct: 1712 YKKFLYDPFPVESHLKDFLHDHLNAEIVSGTIQSKQGAINYLVNTFFFRRLVVSPSYYGL 1771
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
S E + L S L L L + + I +N+ +I+P G I + + + + T
Sbjct: 1772 EDN-SVEAVNQYL----SDLLDSTLADLEQSSCIEINEYDEIIPMSMGKIASFYYLNYKT 1826
Query: 123 MVAFTGWEKAQKDLALL 139
+ F+ K D+ L
Sbjct: 1827 VQNFSDNIKRDSDIKTL 1843
>sp|E7F8F4|ASCC3_DANRE Activating signal cointegrator 1 complex subunit 3 OS=Danio rerio
GN=ascc3 PE=3 SV=2
Length = 1534
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L ++LN+EI L T+++V AV WL T+ +VR+ +NP YG
Sbjct: 474 YLTLLTQQNPIESQFQQSLADNLNAEIALGTVTNVDEAVRWLSYTYLYVRMRANPLAYGI 533
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ +L+ L + L + +I ++ G+ T G + F I +
Sbjct: 534 --NHKAYQMDPQLELYRKELVVESGRKLDKARMIRFDERTGY-FASTDLGRTASHFYIKY 590
Query: 121 NTMVAFTGWEKAQ 133
NT+ +F AQ
Sbjct: 591 NTIESFNELFNAQ 603
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI T++ A++++ T+FF R++ NP +Y
Sbjct: 1275 YKKFLYEPFPVESSLLSVLSDHLNAEIAAGTVTSKQDAMDYITWTYFFRRLVMNPSYYNL 1334
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLS-RYNLITMNDGFDILPTVTGSIMAKFCIGFN 121
+S E + L S L R L L Y + D I P G I + + +
Sbjct: 1335 -DDISHETINKYL----SNLVERSLRDLECSYCMEIQQDEQTIEPLTYGRISSYYYLKHQ 1389
Query: 122 TMVAF 126
T+ F
Sbjct: 1390 TIRMF 1394
>sp|O60072|MUG81_SCHPO Putative helicase mug81 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mug81 PE=1 SV=1
Length = 1935
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+ + PVES LH+ L HLN+EI TI + A+++L T+F+ RV NP +YG
Sbjct: 1520 YKHFLHSGFPVESYLHKVLDNHLNAEIATGTIDCIQGAMDFLTCTYFYRRVHQNPVYYG- 1578
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
+ + Q + S L + N L + I + PT G I++ + + T
Sbjct: 1579 ----ADGDDQKSIDTYLSKLVVTAFNELEKSACIYRVNEETYAPTTLGRIVSYYYLFHTT 1634
Query: 123 MVAFTG--WEKAQKDLAL 138
+ F E A+ DLAL
Sbjct: 1635 IRNFVQKITENAEFDLAL 1652
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y +V + P+ES LV++LN+E+ L T++++ AV WL T+ ++R+ NP Y
Sbjct: 685 YISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVY-- 742
Query: 63 PAGLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMN--DGFDILPTVTGSIMAKFCI 118
G++ +EL L K L L+ +I N +G+ ++P G I + + I
Sbjct: 743 --GIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNGY-LIPKDLGRIASNYYI 799
Query: 119 GFNTMVAFTGWEKAQKDLALLTTL 142
+ T+ K++ A + L
Sbjct: 800 NYQTVSTLNNLLKSKMSEADIIAL 823
>sp|Q9U2G0|U520_CAEEL Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
OS=Caenorhabditis elegans GN=Y46G5A.4 PE=3 SV=1
Length = 2145
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + PVES + L + LN+E+VL T+S VS A WL TF FVR+L NP YG
Sbjct: 872 YLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGI 931
Query: 63 PAGLSSEEL---QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
+ + Q R ++ + + GL +Y+ G I T G I + F
Sbjct: 932 THEQARADPLLEQRRADLIHTACVLLDKAGLIKYD---KRSGI-IQATELGRIASHFYCT 987
Query: 120 FNTMVAF 126
+ +M +
Sbjct: 988 YESMQTY 994
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVES L L +H N+EIV KTI + A+++L T + R+ NP +Y
Sbjct: 1713 YKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G + L L S L L L I + D D + G I + + I + T
Sbjct: 1773 -QGTTHRHLSDAL----SELVELTLKDLENSKCIAVKDEMDTVSLNLGMIASYYYISYQT 1827
Query: 123 MVAFT 127
+ F+
Sbjct: 1828 IELFS 1832
>sp|P53327|SLH1_YEAST Antiviral helicase SLH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SLH1 PE=1 SV=2
Length = 1967
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ Y L+ + P+ES LV++LN+EI L ++++V A+EWL T+ FVR+ NP Y
Sbjct: 691 DHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFTY 750
Query: 61 G 61
G
Sbjct: 751 G 751
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 12 PVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGFPAGLSSEEL 71
PVESSLH+ L +HL +EI +I++ A+++L TF F R NP +YG S+ +
Sbjct: 1537 PVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTYYGIEDDTSTAGV 1596
Query: 72 QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNTM 123
L S L L L + ++ G DI+ T SI + + I T+
Sbjct: 1597 SEHL----SSLIDSTLENLRESQCVLLH-GDDIVATPFLSISSYYYISHLTI 1643
>sp|Q55CI8|HELCL_DICDI Activating signal cointegrator 1 complex subunit 3-like
OS=Dictyostelium discoideum GN=ascc3l PE=3 SV=1
Length = 2237
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+ + PVES L L + NSEIV KTI+ A+++L TF + R+ NP +Y
Sbjct: 1791 EYYKMFLNEPLPVESHLDHCLHDQFNSEIVTKTITKKQDALDYLTWTFLYRRLNQNPNYY 1850
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFD-ILPTVTGSIMAKFCIG 119
+G+S L L S L L L + N IT+ D D + P G I + + +
Sbjct: 1851 NL-SGVSHLHLSEHL----SELVENTLVELEQSNCITIQDDQDKVSPLNLGIIASYYYLK 1905
Query: 120 FNTMVAF 126
+ T+ F
Sbjct: 1906 YQTIELF 1912
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + +ES + ++LN+EIVL +I V AV WL T+ ++ ++ NP Y
Sbjct: 948 YLSLLNTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPLYEI 1007
Query: 63 P-AGLSSEEL--QSRLQGKNSGLCMRELNGLSRYN 94
+ L Q RL +S + E N L +Y+
Sbjct: 1008 SYDDFEKDPLLEQRRLDLVHSAATILEKNSLIKYD 1042
>sp|Q8N3C0|ASCC3_HUMAN Activating signal cointegrator 1 complex subunit 3 OS=Homo sapiens
GN=ASCC3 PE=1 SV=3
Length = 2202
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ R P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 876 YLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGI 935
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + G+ T G + + I +
Sbjct: 936 --SHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGY-FSSTDLGRTASHYYIKY 992
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 993 NTIETFNELFDAHK 1006
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLS-RYNLITMNDGFDILPTVTGSIMAKFCIGFN 121
+S + + L S L + L L Y + D I P G I + + +
Sbjct: 1773 -GDVSHDSVNKFL----SHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQ 1827
Query: 122 TMVAF 126
T+ F
Sbjct: 1828 TVKMF 1832
>sp|E9PZJ8|ASCC3_MOUSE Activating signal cointegrator 1 complex subunit 3 OS=Mus musculus
GN=Ascc3 PE=2 SV=1
Length = 2198
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV W+ T+ +VR+ +NP YG
Sbjct: 877 YLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVRWMSYTYLYVRMRANPLAYGI 936
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + G+ T G + F I +
Sbjct: 937 --SHKAYQIDPTLRKHREQLLIEVGQKLDKAKMIRFEERTGY-FSSTDLGRTASHFYIKY 993
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 994 NTIETFNELFDAHK 1007
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1714 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSL 1773
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITM-NDGFDILPTVTGSIMAKFCIGFN 121
+S + + L S L + L L + I + D I P G I + + +
Sbjct: 1774 -GDVSQDSINKFL----SHLIGQSLVELELSHCIEVGEDNRTIEPLTCGRIASYYYLKHK 1828
Query: 122 TMVAF 126
T+ F
Sbjct: 1829 TVKMF 1833
>sp|F1LPQ2|ASCC3_RAT Activating signal cointegrator 1 complex subunit 3 OS=Rattus
norvegicus GN=Ascc3 PE=2 SV=1
Length = 2197
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 877 YLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWMSYTYLYVRMRANPLAYGI 936
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + G+ T G + + I +
Sbjct: 937 --SHKAYQMDPTLRKHREQLLIEVGQKLDKARMIRFEERTGY-FSSTDLGRTASHYYIKY 993
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 994 NTIETFNELFDAHK 1007
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G S++ ++ G + EL LS + + D I P G I + + + T
Sbjct: 1773 --GDVSQDAINKFLSHLIGQSLVELE-LS-HCIEVGEDNRSIEPLTCGRIASYYYLKHKT 1828
Query: 123 MVAF 126
+ F
Sbjct: 1829 VKMF 1832
>sp|F1NTD6|ASCC3_CHICK Activating signal cointegrator 1 complex subunit 3 OS=Gallus gallus
GN=ascc3 PE=3 SV=2
Length = 2211
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 885 YLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGI 944
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + GF T G + + I +
Sbjct: 945 --SHKAYQMDPGLEKHREQLVIEVGRKLDKARMIRFEERTGF-FSSTDLGRTASHYYIKY 1001
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 1002 NTIETFNELFDAHK 1015
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1722 YKKFLYEPFPVESSLLDVLADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNL 1781
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLS-RYNLITMNDGFDILPTVTGSIMAKFCIGFN 121
+S + + L S L + L L Y + D I P G I + + +
Sbjct: 1782 -DNVSHDTMNKYL----SSLVEKSLFDLECSYCIEIGEDNRTIEPLTYGRIASYYYLKHP 1836
Query: 122 TMVAF 126
T+ F
Sbjct: 1837 TIGMF 1841
>sp|Q9UT24|BRR2_SCHPO Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=brr2 PE=1 SV=1
Length = 2176
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+K + P+ES L L + SEI +TI AV+WL ++ + R+++NP +Y
Sbjct: 1747 EYYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLVANPAYY 1806
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAK-FCIG 119
G ++ E + L S L +N LS LIT++D D + +++A + I
Sbjct: 1807 GL-QDITHESVSEFL----SDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGIT 1861
Query: 120 FNTMVAF 126
+ TM F
Sbjct: 1862 YITMQTF 1868
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES R L + LN+E+ L T+ + V+WL T+ +VR+L +P Y
Sbjct: 918 YLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSV 977
Query: 63 PAGLSSEE--LQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
++ +Q R +S + E L YN + T G + A + +
Sbjct: 978 GPEYDDDKYLVQKRADLLHSAAILLEKCKLLVYN----RQSGTLTATELGKVAASYYVTH 1033
Query: 121 NTMVAF 126
N+M +
Sbjct: 1034 NSMAIY 1039
>sp|E1BNG3|ASCC3_BOVIN Activating signal cointegrator 1 complex subunit 3 OS=Bos taurus
GN=ascc3 PE=3 SV=1
Length = 2201
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 876 YLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGI 935
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L L + L + +I + G+ T G + + I +
Sbjct: 936 --SHKAYQIDPTLAKHREQLVIEVGRKLDKARMIRFEERTGY-FSSTDLGRTASHYYIKY 992
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 993 NTIETFNELFDAHK 1006
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITM-NDGFDILPTVTGSIMAKFCIGFN 121
+ +S + + L S L + L L I + D I P G I + + +
Sbjct: 1773 -SDVSHDSVNKFL----SNLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQ 1827
Query: 122 TMVAF 126
T+ F
Sbjct: 1828 TVKMF 1832
>sp|P32639|BRR2_YEAST Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BRR2 PE=1 SV=2
Length = 2163
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ Y ++ + P+ES LV++LN+E+V I + AV WL T+ +VR+L++P Y
Sbjct: 896 QYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLY 955
Query: 61 GFPAGLSSEELQS-RLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
P S +L+ R +S LC+ + L Y+ ND I T G+I + F I
Sbjct: 956 KVPDISSDGQLKKFRESLVHSALCILKEQELVLYD--AENDV--IEATDLGNIASSFYIN 1011
Query: 120 FNTMVAF 126
+M +
Sbjct: 1012 HASMDVY 1018
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + P ES L + + LN+EI I V+W ++F+ R+ NP +YG
Sbjct: 1732 YKKFLIEPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGV 1791
Query: 63 ----PAGLS 67
P G+S
Sbjct: 1792 RDTSPHGIS 1800
>sp|P37570|YACI_BACSU Putative ATP:guanido phosphotransferase YacI OS=Bacillus subtilis
(strain 168) GN=yacI PE=3 SV=1
Length = 363
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 51 VRVLSNPGHYGFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDG 101
+R+ N H FP S+EE S +Q +E+ G+ ++ LI MND
Sbjct: 30 IRLARNFEHIRFPTRYSNEEASSIIQQFEDQFSEQEIPGIGKFVLIRMNDA 80
>sp|A8F953|Y070_BACP2 Putative ATP:guanido phosphotransferase BPUM_0070 OS=Bacillus
pumilus (strain SAFR-032) GN=BPUM_0070 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 51 VRVLSNPGHYGFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND 100
+R+ N H FP S EE Q+ LQ +E+ + + LI MN+
Sbjct: 30 IRLARNLEHVRFPTQFSQEEAQAVLQQFEQKFASQEVKDIGNFVLIRMNE 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,130,430
Number of Sequences: 539616
Number of extensions: 1995004
Number of successful extensions: 4357
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4320
Number of HSP's gapped (non-prelim): 36
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)