Your job contains 1 sequence.
>psy9269
ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY
GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF
NTMVAFTGWEKAQKDLALLTTLPLATSR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9269
(148 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen... 333 6.8e-29 1
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN... 325 5.4e-28 1
UNIPROTKB|A2PYH4 - symbol:HFM1 "Probable ATP-dependent DN... 325 8.0e-28 1
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ... 315 9.3e-27 1
UNIPROTKB|F1S4E9 - symbol:HFM1 "Uncharacterized protein" ... 315 9.3e-27 1
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ... 307 6.6e-26 1
UNIPROTKB|E2R5U9 - symbol:HFM1 "Uncharacterized protein" ... 307 6.8e-26 1
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica... 299 2.5e-25 1
TAIR|locus:2089144 - symbol:RCK "ROCK-N-ROLLERS" species:... 238 1.1e-18 1
UNIPROTKB|G4N3Z7 - symbol:MGG_05900 "Uncharacterized prot... 202 1.1e-14 1
ASPGD|ASPL0000030426 - symbol:AN5514 species:162425 "Emer... 192 1.1e-13 1
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica... 181 1.4e-12 1
UNIPROTKB|F1SU36 - symbol:SNRNP200 "Uncharacterized prote... 159 1.1e-10 1
UNIPROTKB|B4E0P5 - symbol:SNRNP200 "U5 small nuclear ribo... 159 1.2e-10 1
FB|FBgn0263599 - symbol:l(3)72Ab "lethal (3) 72Ab" specie... 161 3.7e-10 1
UNIPROTKB|O75643 - symbol:SNRNP200 "U5 small nuclear ribo... 159 6.0e-10 1
UNIPROTKB|E1BH78 - symbol:LOC100850262 "Uncharacterized p... 159 6.0e-10 1
UNIPROTKB|F1LNJ2 - symbol:Ascc3l1 "Protein Ascc3l1" speci... 159 6.0e-10 1
ZFIN|ZDB-GENE-081105-64 - symbol:si:ch211-251j10.5 "si:ch... 158 7.7e-10 1
DICTYBASE|DDB_G0290389 - symbol:ascc3 "activating signal ... 158 7.9e-10 1
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m... 149 7.1e-09 1
ASPGD|ASPL0000051297 - symbol:AN10194 species:162425 "Eme... 149 7.2e-09 1
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ... 146 1.3e-08 1
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli... 144 2.8e-08 1
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica... 144 2.8e-08 1
GENEDB_PFALCIPARUM|PFD1060w - symbol:PFD1060w "u5 small n... 142 5.3e-08 1
UNIPROTKB|Q8IFP1 - symbol:PFD1060w "U5 small nuclear ribo... 142 5.3e-08 1
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh... 139 8.1e-08 1
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc... 139 8.1e-08 1
ASPGD|ASPL0000044033 - symbol:AN2482 species:162425 "Emer... 138 9.6e-08 1
TAIR|locus:2037375 - symbol:emb1507 "embryo defective 150... 136 1.7e-07 1
UNIPROTKB|G4N5J1 - symbol:MGG_06124 "Activating signal co... 134 2.5e-07 1
WB|WBGene00013189 - symbol:Y54E2A.4 species:6239 "Caenorh... 134 2.6e-07 1
TAIR|locus:2059969 - symbol:AT2G42270 species:3702 "Arabi... 134 2.8e-07 1
DICTYBASE|DDB_G0270042 - symbol:ascc3l "U5 small nuclear ... 134 2.9e-07 1
UNIPROTKB|H9L351 - symbol:H9L351 "Uncharacterized protein... 121 3.0e-07 1
POMBASE|SPBC13G1.10c - symbol:mug81 "ATP-dependent RNA he... 132 4.0e-07 1
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe... 132 4.6e-07 1
SGD|S000003503 - symbol:SLH1 "Putative RNA helicase relat... 131 5.2e-07 1
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg... 131 5.9e-07 1
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe... 130 7.5e-07 1
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato... 129 9.6e-07 1
CGD|CAL0003134 - symbol:orf19.3980 species:5476 "Candida ... 128 1.1e-06 1
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"... 127 1.4e-06 1
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"... 127 1.6e-06 1
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe... 126 2.0e-06 1
POMBASE|SPAC9.03c - symbol:brr2 "U5 snRNP complex subunit... 125 2.5e-06 1
SGD|S000000974 - symbol:BRR2 "RNA-dependent ATPase RNA he... 120 8.5e-06 1
>ZFIN|ZDB-GENE-061207-43 [details] [associations]
symbol:hfm1 "HFM1, ATP-dependent DNA helicase
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
IPI:IPI00897259 ProteinModelPortal:F1QWJ0
Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
Length = 1049
Score = 333 (122.3 bits), Expect = 6.8e-29, P = 6.8e-29
Identities = 60/127 (47%), Positives = 93/127 (73%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
++Y + G + +ESSLH +LVEHLN+EIVL TISDV++A++W+RSTF ++R L NP HY
Sbjct: 406 DKYMHFLSGLDCIESSLHTNLVEHLNAEIVLHTISDVNMALDWIRSTFLYIRALKNPKHY 465
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GFP + ++++LQ LC++ LN L+ +NLITM++ +I PT TG +MA++C+ F
Sbjct: 466 GFPPEVDKCGIETKLQE----LCLKNLNSLASFNLITMDEDINIKPTETGKLMARYCVAF 521
Query: 121 NTMVAFT 127
+T+ F+
Sbjct: 522 DTVKQFS 528
>UNIPROTKB|A6NGI5 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
Uniprot:A6NGI5
Length = 1114
Score = 325 (119.5 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 61/126 (48%), Positives = 91/126 (72%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
++Y +++ R+ VESSLHRHL+EHLN+EIVL TI+DV++AVEW+RST ++R L NP HY
Sbjct: 355 DKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHY 414
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++++LQ LC++ LN LS +LI M++G + PT G +MA + I F
Sbjct: 415 GFASGLNKDGIEAKLQE----LCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYYITF 470
Query: 121 NTMVAF 126
T+ F
Sbjct: 471 ETVKKF 476
>UNIPROTKB|A2PYH4 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
Length = 1435
Score = 325 (119.5 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 61/126 (48%), Positives = 91/126 (72%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
++Y +++ R+ VESSLHRHL+EHLN+EIVL TI+DV++AVEW+RST ++R L NP HY
Sbjct: 676 DKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHY 735
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++++LQ LC++ LN LS +LI M++G + PT G +MA + I F
Sbjct: 736 GFASGLNKDGIEAKLQE----LCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYYITF 791
Query: 121 NTMVAF 126
T+ F
Sbjct: 792 ETVKKF 797
>UNIPROTKB|F1MFR1 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
Length = 1438
Score = 315 (115.9 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 59/126 (46%), Positives = 89/126 (70%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E+Y +++ + +ESSLHRHL+EHLN+EIVL TI++V++A+EW+RST ++R L NP HY
Sbjct: 679 EKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITNVNIALEWIRSTLLYIRALKNPSHY 738
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++S+LQ LC++ LN LS NLI M++ + PT G +MA + I F
Sbjct: 739 GFASGLNKDGIESKLQE----LCLKNLNDLSSLNLIKMDEDINFKPTEAGRLMAWYYITF 794
Query: 121 NTMVAF 126
T+ F
Sbjct: 795 ETVKKF 800
>UNIPROTKB|F1S4E9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:CU179709
Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
Length = 1438
Score = 315 (115.9 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 59/126 (46%), Positives = 89/126 (70%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E+Y +++ + VESSLHRHL+EHLN+EIVL TI+DV++A+EW+RST ++R L NP HY
Sbjct: 678 EKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPSHY 737
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++S+LQ LC++ LN LS +LI M++ + PT G +MA + + F
Sbjct: 738 GFASGLNKDGIESKLQE----LCLKNLNDLSSLDLIKMDEDINFKPTEAGRLMAWYYVTF 793
Query: 121 NTMVAF 126
T+ F
Sbjct: 794 ETVKKF 799
>UNIPROTKB|E2RA34 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
Uniprot:E2RA34
Length = 1437
Score = 307 (113.1 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E+Y +++ + VESSLHRHL+EHLN+EIVL TI+DV++A+EW+RST ++R L NP HY
Sbjct: 677 EKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPSHY 736
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++++LQ LC++ L+ LS +LI M++ + PT G +MA + I F
Sbjct: 737 GFASGLNKDGIEAKLQE----LCLKNLHDLSSLDLIRMDEDVNFKPTEAGRLMAWYYITF 792
Query: 121 NTMVAF 126
T+ F
Sbjct: 793 ETVKKF 798
>UNIPROTKB|E2R5U9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
Length = 1466
Score = 307 (113.1 bits), Expect = 6.8e-26, P = 6.8e-26
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E+Y +++ + VESSLHRHL+EHLN+EIVL TI+DV++A+EW+RST ++R L NP HY
Sbjct: 677 EKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPSHY 736
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++++LQ LC++ L+ LS +LI M++ + PT G +MA + I F
Sbjct: 737 GFASGLNKDGIEAKLQE----LCLKNLHDLSSLDLIRMDEDVNFKPTEAGRLMAWYYITF 792
Query: 121 NTMVAF 126
T+ F
Sbjct: 793 ETVKKF 798
>RGD|1584010 [details] [associations]
symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 IPI:IPI00766186
Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
Length = 954
Score = 299 (110.3 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E+Y +++ + VESSLHRHL+EHLN+EIVL TI+DVS+A++W+RST ++R L NP HY
Sbjct: 406 EKYVQMLACNDTVESSLHRHLIEHLNAEIVLHTITDVSIALDWIRSTLLYIRALKNPSHY 465
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
GF +GL+ + ++++LQ LC++ L LS +LI M++ + T G +MA + I F
Sbjct: 466 GFISGLNKDGIEAKLQE----LCLKNLKDLSSLDLIKMDEDLNFRSTEAGRLMAWYYITF 521
Query: 121 NTMVAF 126
T+ F
Sbjct: 522 ETVKKF 527
>TAIR|locus:2089144 [details] [associations]
symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
"mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
Uniprot:Q5D892
Length = 1133
Score = 238 (88.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 49/122 (40%), Positives = 76/122 (62%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
YE L+ G E VES L L+EHL +EIV TISD++ A+EW++ ++ +VR+ NP +Y
Sbjct: 434 YENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYLYVRMKKNPENYAI 493
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLI-TMNDGFDILPTVTGSIMAKFCIGFN 121
G+ + ++ LQ LC++++N LS+Y +I T DGF + P G +M K+ + F
Sbjct: 494 KKGIPKDRVEKHLQE----LCLQKINELSQYQMIWTDTDGFVLKPEEPGRLMTKYYLKFE 549
Query: 122 TM 123
TM
Sbjct: 550 TM 551
>UNIPROTKB|G4N3Z7 [details] [associations]
symbol:MGG_05900 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00278 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:CM001233 GO:GO:0003677 GO:GO:0006281 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 RefSeq:XP_003711726.1
ProteinModelPortal:G4N3Z7 EnsemblFungi:MGG_05900T0 GeneID:2684075
KEGG:mgr:MGG_05900 Uniprot:G4N3Z7
Length = 1508
Score = 202 (76.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 73/125 (58%)
Query: 2 RYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
RYE + G + +ES+LH +L+ HLNSEI L TI + A EWL+STF VR+ +NP HY
Sbjct: 638 RYEAMASGTQVLESTLHHNLIHHLNSEICLGTIRSLDSAKEWLKSTFLGVRLHANPSHYK 697
Query: 62 FPA-GLSSEELQSRLQGKN-SGLCMRELNGLSRYNLITMNDGFDILP-TVTGSIMAKFCI 118
+ + E+L G++ +C RE+N L LI ++ ++L T G M+++ I
Sbjct: 698 IDSQSPNGEKLHV---GRSIDDMCEREINLLQEAKLIRFDN--NVLECTTAGRSMSEYMI 752
Query: 119 GFNTM 123
F TM
Sbjct: 753 RFETM 757
>ASPGD|ASPL0000030426 [details] [associations]
symbol:AN5514 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 EMBL:BN001305 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 eggNOG:COG1204 EMBL:AACD01000094 GO:GO:0008026
KO:K15271 OrthoDB:EOG4WWVSR RefSeq:XP_663118.1
ProteinModelPortal:Q5B1R6 EnsemblFungi:CADANIAT00003572
GeneID:2871792 KEGG:ani:AN5514.2 HOGENOM:HOG000216651
Uniprot:Q5B1R6
Length = 1385
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 45/121 (37%), Positives = 63/121 (52%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
YE+LV G E VESSLH +L+EHLN+EI L I A WL TF VR+ NP HY
Sbjct: 607 YERLVSGSESVESSLHLNLIEHLNAEIGLGNIKSTESAASWLAGTFLSVRLRRNPTHYRL 666
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G + + L+ +C +++ L Y L+ D + T G M+++ I + T
Sbjct: 667 KEGANRNDTNEMLRH----ICEKDIKLLQEYALV---DTESLKSTPFGYAMSRYSIRYET 719
Query: 123 M 123
M
Sbjct: 720 M 720
>SGD|S000003220 [details] [associations]
symbol:HFM1 "Meiosis specific DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
"meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
GermOnline:YGL251C Uniprot:P51979
Length = 1187
Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/131 (33%), Positives = 69/131 (52%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ YE L+ G + +ESSLH +L+EHL +E L+T+ + AV WLR+TFF+VR NP Y
Sbjct: 514 QTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYSIETAVNWLRNTFFYVRFGKNPAAY 573
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
S S + + C L+ L + +I +++G + T G+ M + I F
Sbjct: 574 QEVNRYVS--FHSVEDSQINQFCQYLLDTLVKVKIIDISNG-EYKSTAYGNAMTRHYISF 630
Query: 121 NTMVAFTGWEK 131
+M F +K
Sbjct: 631 ESMKQFINAKK 641
>UNIPROTKB|F1SU36 [details] [associations]
symbol:SNRNP200 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GeneTree:ENSGT00640000091272 EMBL:CU896688
Ensembl:ENSSSCT00000008906 OMA:QSSKKEF Uniprot:F1SU36
Length = 553
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + PVES L + +H N+EIV KTI + AV++L TF + R+ NP +Y
Sbjct: 131 FKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL 190
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G+S L L S L + L+ L + I++ D D+ P G I A + I + T
Sbjct: 191 Q-GISHRHLSDHL----SELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTT 245
Query: 123 MVAFT 127
+ F+
Sbjct: 246 IELFS 250
>UNIPROTKB|B4E0P5 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001650
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0030529 GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC021188 UniGene:Hs.246112
HGNC:HGNC:30859 ChiTaRS:SNRNP200 EMBL:AK303465 IPI:IPI00927472
SMR:B4E0P5 STRING:B4E0P5 Ensembl:ENST00000429650
HOGENOM:HOG000031250 HOVERGEN:HBG078981 Uniprot:B4E0P5
Length = 595
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + PVES L + +H N+EIV KTI + AV++L TF + R+ NP +Y
Sbjct: 241 FKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL 300
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G+S L L S L + L+ L + I++ D D+ P G I A + I + T
Sbjct: 301 Q-GISHRHLSDHL----SELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTT 355
Query: 123 MVAFT 127
+ F+
Sbjct: 356 IELFS 360
>FB|FBgn0263599 [details] [associations]
symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
GermOnline:CG5931 Uniprot:Q9VUV9
Length = 2142
Score = 161 (61.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + P+ES L + +H N+E+V KTI + AV++L TF + R+ NP +Y
Sbjct: 1713 FKKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G++ L L S L L+ L + I++ D D LP G I A + I + T
Sbjct: 1773 Q-GVTHRHLSDHL----SELVENTLSDLEQSKCISVEDDMDTLPLNLGMIAAYYYINYTT 1827
Query: 123 MVAFT 127
+ F+
Sbjct: 1828 IELFS 1832
Score = 138 (53.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L + LN+EIVL T+ + AV WL T+ ++R+L NP YG
Sbjct: 879 YLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGV 938
Query: 63 PA-GLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
+ ++ L Q R ++ C E +GL +Y+ T + F + T G I + + +
Sbjct: 939 SHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGH--FQV--TDLGRIASHYYLT 994
Query: 120 FNTMVAF 126
TM+ +
Sbjct: 995 HETMLTY 1001
>UNIPROTKB|O75643 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
CleanEx:HS_SNRNP200 Genevestigator:O75643
GermOnline:ENSG00000144028 Uniprot:O75643
Length = 2136
Score = 159 (61.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + PVES L + +H N+EIV KTI + AV++L TF + R+ NP +Y
Sbjct: 1714 FKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL 1773
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G+S L L S L + L+ L + I++ D D+ P G I A + I + T
Sbjct: 1774 Q-GISHRHLSDHL----SELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTT 1828
Query: 123 MVAFT 127
+ F+
Sbjct: 1829 IELFS 1833
Score = 124 (48.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/127 (29%), Positives = 63/127 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L + LN+EIVL + + AV WL + ++R+L +P YG
Sbjct: 879 YLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGI 938
Query: 63 PAG-LSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
L + L Q RL ++ M + N L +Y+ T N F + T G I + + I
Sbjct: 939 SHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGN--FQV--TELGRIASHYYIT 994
Query: 120 FNTMVAF 126
+T+ +
Sbjct: 995 NDTVQTY 1001
>UNIPROTKB|E1BH78 [details] [associations]
symbol:LOC100850262 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
NextBio:20869492 Uniprot:E1BH78
Length = 2136
Score = 159 (61.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + PVES L + +H N+EIV KTI + AV++L TF + R+ NP +Y
Sbjct: 1714 FKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL 1773
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G+S L L S L + L+ L + I++ D D+ P G I A + I + T
Sbjct: 1774 Q-GISHRHLSDHL----SELVEQTLSDLEQSKCISVEDEMDVAPLNLGMIAAYYYINYTT 1828
Query: 123 MVAFT 127
+ F+
Sbjct: 1829 IELFS 1833
Score = 123 (48.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L + LN+E+VL + + AV WL + ++R+L +P YG
Sbjct: 879 YLSLLNQQLPIESQMVSKLPDMLNAEVVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGI 938
Query: 63 PAG-LSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
L + L Q RL ++ M + N L +Y+ T N F + T G I + + I
Sbjct: 939 SHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGN--FQV--TELGRIASHYYIT 994
Query: 120 FNTMVAF 126
+T+ +
Sbjct: 995 NDTVQTY 1001
>UNIPROTKB|F1LNJ2 [details] [associations]
symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
Length = 2139
Score = 159 (61.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + PVES L + +H N+EIV KTI + AV++L TF + R+ NP +Y
Sbjct: 1717 FKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL 1776
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G+S L L S L + L+ L + I++ D D+ P G I A + I + T
Sbjct: 1777 Q-GISHRHLSDHL----SELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTT 1831
Query: 123 MVAFT 127
+ F+
Sbjct: 1832 IELFS 1836
Score = 124 (48.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/127 (29%), Positives = 63/127 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L + LN+EIVL + + AV WL + ++R+L +P YG
Sbjct: 879 YLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGI 938
Query: 63 PAG-LSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
L + L Q RL ++ M + N L +Y+ T N F + T G I + + I
Sbjct: 939 SHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGN--FQV--TELGRIASHYYIT 994
Query: 120 FNTMVAF 126
+T+ +
Sbjct: 995 NDTVQTY 1001
>ZFIN|ZDB-GENE-081105-64 [details] [associations]
symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
HOVERGEN:HBG051896 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
Length = 2134
Score = 158 (60.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
++K + PVES L L +H N+EIV KT+ + AV++L TF + R+ NP +Y
Sbjct: 1710 FKKFLYEPLPVESHLDHCLHDHFNAEIVTKTVENKQDAVDYLTWTFLYRRMTQNPNYYNL 1769
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G+S L L S L L L + I++ D D+ P G I A + I + T
Sbjct: 1770 Q-GMSHRHLSDHL----SELVENTLQDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTT 1824
Query: 123 MVAFT 127
+ F+
Sbjct: 1825 IELFS 1829
Score = 121 (47.7 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L + LN+EIVL + + AV WL T+ +VR+L NP YG
Sbjct: 876 YLSLLNQQLPIESQMVGKLADMLNAEIVLGNVQNAKDAVNWLGYTYLYVRMLRNPTLYGV 935
Query: 63 PAG-LSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
S + L + R+ ++ + E N L +Y+ + F + T G I + F I
Sbjct: 936 SHDDRSIDPLLERRRMDLVHTAATVLEKNNLVKYD--KRSGSFQV--TDLGRIASHFYIT 991
Query: 120 FNTMVAF 126
+++ +
Sbjct: 992 HESIMTY 998
>DICTYBASE|DDB_G0290389 [details] [associations]
symbol:ascc3 "activating signal cointegrator 1
complex subunit" species:44689 "Dictyostelium discoideum"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
ProtClustDB:CLSZ2429672 Uniprot:Q54G57
Length = 2195
Score = 158 (60.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ Y L+ P+ES +L +HLN+EIVL T+S+V+ AV WL T+ F+R+L NP Y
Sbjct: 876 DHYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYTYLFIRMLQNPLVY 935
Query: 61 GFPAGLSSEELQ 72
G P+ S++ Q
Sbjct: 936 GIPSSQRSKDPQ 947
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/133 (32%), Positives = 67/133 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVES L L +HLN+EIV TI A+ +L +TFFF R++ +P +YG
Sbjct: 1712 YKKFLYDPFPVESHLKDFLHDHLNAEIVSGTIQSKQGAINYLVNTFFFRRLVVSPSYYGL 1771
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
S E + L S L L L + + I +N+ +I+P G I + + + + T
Sbjct: 1772 EDN-SVEAVNQYL----SDLLDSTLADLEQSSCIEINEYDEIIPMSMGKIASFYYLNYKT 1826
Query: 123 MVAFTGWEKAQKD 135
+ F+ K D
Sbjct: 1827 VQNFSDNIKRDSD 1839
>FB|FBgn0038344 [details] [associations]
symbol:CG5205 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
Length = 2183
Score = 149 (57.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L EH+N+EIV T+ A+++L T+FF R+L NP +Y
Sbjct: 1724 YKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQL 1783
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
+ E + + + S L R + LS + DG ++PT G I + + + + T
Sbjct: 1784 Q-DIEPENVNNFM----SNLVERVVYELSAAACLVERDGC-LIPTFLGRISSYYYLSYRT 1837
Query: 123 MVAF 126
M F
Sbjct: 1838 MKHF 1841
Score = 148 (57.2 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES+ L ++LN+EI L TI++V A+EWL T+ FVR+ NP YG
Sbjct: 886 YLSLLTNQFPIESNFVNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYGI 945
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDG-FDILPTVTGSIMAKFCIGFN 121
S E L+ + L M L + ++ N D+ T G + F I ++
Sbjct: 946 E--YSELEKDPTLEARRRALIMSAAMSLDKARMMRFNQRTMDMNITDLGRTASYFYIKYD 1003
Query: 122 TMVAF 126
T+ F
Sbjct: 1004 TVETF 1008
>ASPGD|ASPL0000051297 [details] [associations]
symbol:AN10194 species:162425 "Emericella nidulans"
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
Length = 2208
Score = 149 (57.5 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L L +++N+EIVL I V+WL T+ FVR+L +PG Y
Sbjct: 934 YLSLMNQQLPIESQLVSKLADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSV 993
Query: 63 PAGLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
A +++ Q R+ +S + E GL +Y+ T + T G I + + IG
Sbjct: 994 GADYENDDALEQKRVDLVHSAAVLLEKAGLVKYDKKTGR----LQSTELGRIASHYYIGH 1049
Query: 121 NTMVAF 126
N+M+ +
Sbjct: 1050 NSMLTY 1055
Score = 140 (54.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 42/127 (33%), Positives = 64/127 (50%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+K + PVES L ++ + +EI TI+ +V+WL T+F+ R+L+NP Y
Sbjct: 1769 EYYKKFLNEALPVESHLQLYMHDAFVTEISQGTIASTQDSVDWLTYTYFYRRLLANPSFY 1828
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFD-ILPTVTGSIMAKFCIG 119
G +S E L + L S L L LS +I +++ D + P SI A + I
Sbjct: 1829 GL-TDISHEGLSTFL----SELVENTLKELSEAKIIDLDEEDDSVSPLNAASIGAYYNIS 1883
Query: 120 FNTMVAF 126
+ TM F
Sbjct: 1884 YITMQTF 1890
>CGD|CAL0001532 [details] [associations]
symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000388 "spliceosome conformational change to
release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
Uniprot:Q5A0Z8
Length = 1987
Score = 146 (56.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y ++ + P+ES L LV+++N+EIV +I+ + +EWL T+FFVR+L +P YG
Sbjct: 764 YLAILNQQLPIESQLIHKLVDNINAEIVAGSITTIEEGIEWLTYTYFFVRMLQSPALYGV 823
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGF-DILPTVTGSIMAKFCIGFN 121
A L + + L L L+ N + T G I + F I F
Sbjct: 824 EATYDFTN-DPTLYNRRADLIYTAFCILHENKLVVYNAALGSVASTELGKIASHFYINFE 882
Query: 122 TM 123
T+
Sbjct: 883 TI 884
>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
symbol:PF14_0370 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 34/126 (26%), Positives = 65/126 (51%)
Query: 2 RYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
+Y KL+ +ES+ +++ HLN+EI + TI ++ ++WL T+ F+R+ NP Y
Sbjct: 852 KYIKLLTNNTVIESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFIRMKKNP--YL 909
Query: 62 FPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLIT-MNDGFDILPTVTGSIMAKFCIGF 120
+ ++++ L K + M+ + LS L+ + D + T G I AK+ + +
Sbjct: 910 YDVDINND---LNLYNKRKDIIMKAIQNLSENKLVRRVLLTNDFIGTFYGQIAAKYYVDY 966
Query: 121 NTMVAF 126
T+ F
Sbjct: 967 KTIGMF 972
>UNIPROTKB|Q8IL78 [details] [associations]
symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 34/126 (26%), Positives = 65/126 (51%)
Query: 2 RYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
+Y KL+ +ES+ +++ HLN+EI + TI ++ ++WL T+ F+R+ NP Y
Sbjct: 852 KYIKLLTNNTVIESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFIRMKKNP--YL 909
Query: 62 FPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLIT-MNDGFDILPTVTGSIMAKFCIGF 120
+ ++++ L K + M+ + LS L+ + D + T G I AK+ + +
Sbjct: 910 YDVDINND---LNLYNKRKDIIMKAIQNLSENKLVRRVLLTNDFIGTFYGQIAAKYYVDY 966
Query: 121 NTMVAF 126
T+ F
Sbjct: 967 KTIGMF 972
>GENEDB_PFALCIPARUM|PFD1060w [details] [associations]
symbol:PFD1060w "u5 small nuclear
ribonucleoprotein-specific protein, putative" species:5833
"Plasmodium falciparum" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 142 (55.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+ + VES++ +L LN+EIV+ TI + A++WL +FF+ R+ NP +Y
Sbjct: 2402 EYYKNFIYEPLTVESNIEDNLPNFLNNEIVMSTIENYQDAIDWLTWSFFYRRIKKNPNYY 2461
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDG-FDILPTVTGSIMAKFCIG 119
G G+S+E + L S L + LS N I + + DI P G I + + +
Sbjct: 2462 GLK-GISNEHISDYL----SELIENNMEILSFANCINIEEQTMDIKPCNLGIISSFYNLD 2516
Query: 120 FNTMVAF 126
++ + F
Sbjct: 2517 YHIIHFF 2523
Score = 109 (43.4 bits), Expect = 0.00017, P = 0.00017
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 13 VESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
+ES+L ++V +N+EIVLK I ++ A+ WL T+ ++R+L P YG
Sbjct: 1210 IESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYG 1258
>UNIPROTKB|Q8IFP1 [details] [associations]
symbol:PFD1060w "U5 small nuclear
ribonucleoprotein-specific protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 142 (55.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+ + VES++ +L LN+EIV+ TI + A++WL +FF+ R+ NP +Y
Sbjct: 2402 EYYKNFIYEPLTVESNIEDNLPNFLNNEIVMSTIENYQDAIDWLTWSFFYRRIKKNPNYY 2461
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDG-FDILPTVTGSIMAKFCIG 119
G G+S+E + L S L + LS N I + + DI P G I + + +
Sbjct: 2462 GLK-GISNEHISDYL----SELIENNMEILSFANCINIEEQTMDIKPCNLGIISSFYNLD 2516
Query: 120 FNTMVAF 126
++ + F
Sbjct: 2517 YHIIHFF 2523
Score = 109 (43.4 bits), Expect = 0.00017, P = 0.00017
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 13 VESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
+ES+L ++V +N+EIVLK I ++ A+ WL T+ ++R+L P YG
Sbjct: 1210 IESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYG 1258
>WB|WBGene00012896 [details] [associations]
symbol:snrp-200 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 139 (54.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 42/127 (33%), Positives = 61/127 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + PVES + L + LN+E+VL T+S VS A WL TF FVR+L NP YG
Sbjct: 872 YLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGI 931
Query: 63 PAGLSSEE--LQSRLQGKNSGLC-MRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
+ + L+ R C + + GL +Y+ G I T G I + F
Sbjct: 932 THEQARADPLLEQRRADLIHTACVLLDKAGLIKYD---KRSGI-IQATELGRIASHFYCT 987
Query: 120 FNTMVAF 126
+ +M +
Sbjct: 988 YESMQTY 994
Score = 131 (51.2 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVES L L +H N+EIV KTI + A+++L T + R+ NP +Y
Sbjct: 1713 YKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G + L L S L L L I + D D + G I + + I + T
Sbjct: 1773 Q-GTTHRHLSDAL----SELVELTLKDLENSKCIAVKDEMDTVSLNLGMIASYYYISYQT 1827
Query: 123 MVAFT 127
+ F+
Sbjct: 1828 IELFS 1832
>UNIPROTKB|Q9U2G0 [details] [associations]
symbol:Y46G5A.4 "Putative U5 small nuclear
ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 139 (54.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 42/127 (33%), Positives = 61/127 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + PVES + L + LN+E+VL T+S VS A WL TF FVR+L NP YG
Sbjct: 872 YLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGI 931
Query: 63 PAGLSSEE--LQSRLQGKNSGLC-MRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
+ + L+ R C + + GL +Y+ G I T G I + F
Sbjct: 932 THEQARADPLLEQRRADLIHTACVLLDKAGLIKYD---KRSGI-IQATELGRIASHFYCT 987
Query: 120 FNTMVAF 126
+ +M +
Sbjct: 988 YESMQTY 994
Score = 131 (51.2 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVES L L +H N+EIV KTI + A+++L T + R+ NP +Y
Sbjct: 1713 YKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G + L L S L L L I + D D + G I + + I + T
Sbjct: 1773 Q-GTTHRHLSDAL----SELVELTLKDLENSKCIAVKDEMDTVSLNLGMIASYYYISYQT 1827
Query: 123 MVAFT 127
+ F+
Sbjct: 1828 IELFS 1832
>ASPGD|ASPL0000044033 [details] [associations]
symbol:AN2482 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
Uniprot:Q5BAE8
Length = 2015
Score = 138 (53.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+ + PVES+LH+ L HL +E+ TI+ A+++L TFFF R+ NP +YG
Sbjct: 1519 YKHFLHTGFPVESTLHKVLDNHLGAEVSAGTIATKQDALDYLTWTFFFRRLHKNPSYYGL 1578
Query: 63 PAGL---SSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGF-DILPTVTGSIMAKFCI 118
+S E Q+ Q L + L+ LS + I + ++ PT G IM+ + +
Sbjct: 1579 EISADQHNSLEAQTLAQDFMIDLVDKSLSELSESSCIIFDSATGEVDPTPFGKIMSYYYL 1638
Query: 119 GFNTM 123
T+
Sbjct: 1639 AHKTI 1643
Score = 125 (49.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
Y V ++P+ES LV++LN+EI L T++ +S V+WL ++ FVR+ P +YG
Sbjct: 682 YLSAVTSQQPIESRFSSRLVDNLNAEIALGTVTSISEGVQWLGYSYLFVRMKREPRNYG 740
>TAIR|locus:2037375 [details] [associations]
symbol:emb1507 "embryo defective 1507" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
Genevestigator:Q9SYP1 Uniprot:Q9SYP1
Length = 2171
Score = 136 (52.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/127 (29%), Positives = 60/127 (47%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+K + PVES L L ++ N+E+V I + AV++L TF + R+ NP +Y
Sbjct: 1739 EYYKKFLYEAFPVESQLQHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLPQNPNYY 1798
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
G+S L L S L L+ L I + D ++ P G I + + I +
Sbjct: 1799 NLQ-GVSHRHLSDHL----SELVENTLSDLEASKCIEVEDEMELSPLNLGMIASYYYISY 1853
Query: 121 NTMVAFT 127
T+ F+
Sbjct: 1854 TTIERFS 1860
Score = 122 (48.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L + LN+EIVL T+ + A WL T+ ++R++ NP YG
Sbjct: 903 YLSLMNEQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYGL 962
Query: 63 -PAGLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
P L+ + + + R +S + + N L +Y+ G+ T G I + + I
Sbjct: 963 APDALAKDVVLEERRADLIHSAATILDKNNLVKYD---RKSGY-FQVTDLGRIASYYYIT 1018
Query: 120 FNTMVAF 126
T+ +
Sbjct: 1019 HGTIATY 1025
>UNIPROTKB|G4N5J1 [details] [associations]
symbol:MGG_06124 "Activating signal cointegrator 1 complex
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
KEGG:mgr:MGG_06124 Uniprot:G4N5J1
Length = 1998
Score = 134 (52.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+ + PVESSLH L HL +EI +TI A+++L TFFF R+ NP +YG
Sbjct: 1540 YKHFLHTGFPVESSLHTVLDNHLCAEISAETIITKQDALDYLTWTFFFRRLHKNPSYYGL 1599
Query: 63 PAGLSSEELQSRLQGKNS---GLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
+ + + Q N + L+ L+ + + D+ PT G IM+ + +
Sbjct: 1600 EIPVEEQTSIAAQQAANDYIISMIDSSLDELATSKCVEVYPNGDVDPTPLGKIMSYYYLS 1659
Query: 120 FNTM 123
T+
Sbjct: 1660 HKTI 1663
Score = 121 (47.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 36/130 (27%), Positives = 66/130 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y V + P+ES LV++LN+EI L T++ + AV+W+ ++ +VR+ NP YG
Sbjct: 702 YLTAVTDQLPIESRFSSKLVDNLNAEIALGTVTSIPEAVQWIGYSYLYVRMRKNPMAYGI 761
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVT-GSIMAKFCI--- 118
+ EE +Q + + L ++ L ++ N+ + L + G I +++ I
Sbjct: 762 -SWAEFEEDPELVQRRRT-LAIQAARTLQECQMVIFNETTEELRSKDIGRIASQYYILHT 819
Query: 119 ---GFNTMVA 125
FNTM++
Sbjct: 820 SIQVFNTMMS 829
>WB|WBGene00013189 [details] [associations]
symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
Length = 2017
Score = 134 (52.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 35/132 (26%), Positives = 61/132 (46%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
++Y ++ + P+ES + L ++LN+E+ L T+S V VEWL T+ + R L NP Y
Sbjct: 714 DKYLTMLVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGVEWLTYTYMYTRALKNPMAY 773
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDIL-PTVTGSIMAKFCIG 119
G ++ E L+ + L + +I + + L T G I + F +
Sbjct: 774 GI--AYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATEYLNSTDLGRIASNFYVK 831
Query: 120 FNTMVAFTGWEK 131
+ T+ EK
Sbjct: 832 YETIQLLNEAEK 843
Score = 114 (45.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L H+N+EI TI VE+L T+ + R+ +NP +YG
Sbjct: 1569 YKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLYRRLFANPNYYGL 1628
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDIL-PTVTGSIMAKFCIGFN 121
SEE + K + EL L+ I ++ D++ PT G I + + +
Sbjct: 1629 EE--DSEEAMLKFITKIVDDSVAEL--LAS-ECIHVDSEQDVIKPTPCGRIASVYYLQHE 1683
Query: 122 TM 123
T+
Sbjct: 1684 TV 1685
>TAIR|locus:2059969 [details] [associations]
symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
Genevestigator:O48534 Uniprot:O48534
Length = 2172
Score = 134 (52.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y +L+ + P+ES L + LN+EIVL TI + A WL T+ +VR++ NP YG
Sbjct: 904 YLRLMNEQLPIESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLYVRMVRNPTLYGV 963
Query: 63 -PAGLSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIG 119
P L+ + L + R +S + + N L +Y+ + F + T G I + + I
Sbjct: 964 SPDALAKDLLLEERRADLIHSAATILDKNNLIKYD--RKSGHFQV--TDLGRIASYYYIS 1019
Query: 120 FNTMVAF 126
T+ A+
Sbjct: 1020 HGTIAAY 1026
Score = 133 (51.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+K + PVES L L ++ N+E+V + I + AV++L +F + R+ NP +Y
Sbjct: 1740 EYYKKFLYEALPVESHLQHFLHDNFNAEVVARVIENKQDAVDYLTWSFMYRRLPQNPNYY 1799
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
G+S L L S L L+ L I +++ D+ P G I + + I +
Sbjct: 1800 NL-LGVSHRHLSDHL----SELVENTLSDLEVSKCIEIDNELDLSPLNLGMIASYYYINY 1854
Query: 121 NTMVAFT 127
T+ F+
Sbjct: 1855 TTIERFS 1861
>DICTYBASE|DDB_G0270042 [details] [associations]
symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
Length = 2237
Score = 134 (52.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+ + PVES L L + NSEIV KTI+ A+++L TF + R+ NP +Y
Sbjct: 1791 EYYKMFLNEPLPVESHLDHCLHDQFNSEIVTKTITKKQDALDYLTWTFLYRRLNQNPNYY 1850
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFD-ILPTVTGSIMAKFCIG 119
+G+S L L S L L L + N IT+ D D + P G I + + +
Sbjct: 1851 NL-SGVSHLHLSEHL----SELVENTLVELEQSNCITIQDDQDKVSPLNLGIIASYYYLK 1905
Query: 120 FNTMVAF 126
+ T+ F
Sbjct: 1906 YQTIELF 1912
Score = 103 (41.3 bits), Expect = 0.00056, P = 0.00056
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + +ES + ++LN+EIVL +I V AV WL T+ ++ ++ NP Y
Sbjct: 948 YLSLLNTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPLYEI 1007
Query: 63 PAG-LSSEEL--QSRLQGKNSGLCMRELNGLSRYN 94
+ L Q RL +S + E N L +Y+
Sbjct: 1008 SYDDFEKDPLLEQRRLDLVHSAATILEKNSLIKYD 1042
>UNIPROTKB|H9L351 [details] [associations]
symbol:H9L351 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00640000091272 EMBL:AADN02064073
EMBL:AADN02064074 Ensembl:ENSGALT00000021750
Ensembl:ENSGALT00000036125 Uniprot:H9L351
Length = 254
Score = 121 (47.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES + L + LN+E VL + + AV WL T+ ++R+L +P YG
Sbjct: 139 YLSLLNQQLPIESQMVSKLPDMLNAETVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGI 198
Query: 63 PAG-LSSEEL--QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCI 118
L + L Q RL ++ M + N L +Y+ T N F + T G I + + I
Sbjct: 199 SHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGN--FQV--TELGRIASHYYI 253
>POMBASE|SPBC13G1.10c [details] [associations]
symbol:mug81 "ATP-dependent RNA helicase Slh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
cytoplasmic translation" evidence=ISS] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
Length = 1935
Score = 132 (51.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 37/125 (29%), Positives = 66/125 (52%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y +V + P+ES LV++LN+E+ L T++++ AV WL T+ ++R+ NP YG
Sbjct: 685 YISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVYG- 743
Query: 63 PAGLSSEEL-QSRLQG-KNSGLCMRELNGLSRYNLITMN--DGFDILPTVTGSIMAKFCI 118
++ +EL + L G K L L+ +I N +G+ ++P G I + + I
Sbjct: 744 ---IAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNGY-LIPKDLGRIASNYYI 799
Query: 119 GFNTM 123
+ T+
Sbjct: 800 NYQTV 804
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+ + PVES LH+ L HLN+EI TI + A+++L T+F+ RV NP +YG
Sbjct: 1520 YKHFLHSGFPVESYLHKVLDNHLNAEIATGTIDCIQGAMDFLTCTYFYRRVHQNPVYYGA 1579
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G + + + L S L + N L + I + PT G I++ + + F+T
Sbjct: 1580 D-GDDQKSIDTYL----SKLVVTAFNELEKSACIYRVNEETYAPTTLGRIVSYYYL-FHT 1633
Query: 123 MV 124
+
Sbjct: 1634 TI 1635
>UNIPROTKB|Q8N3C0 [details] [associations]
symbol:ASCC3 "Activating signal cointegrator 1 complex
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
Length = 2202
Score = 132 (51.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ R P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 876 YLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGI 935
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + G+ T G + + I +
Sbjct: 936 SH--KAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGY-FSSTDLGRTASHYYIKY 992
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 993 NTIETFNELFDAHK 1006
Score = 113 (44.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLS-RYNLITMNDGFDILPTVTGSIMAKFCIGFN 121
+S + + L S L + L L Y + D I P G I + + +
Sbjct: 1773 -GDVSHDSVNKFL----SHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQ 1827
Query: 122 TMVAF 126
T+ F
Sbjct: 1828 TVKMF 1832
>SGD|S000003503 [details] [associations]
symbol:SLH1 "Putative RNA helicase related to Ski2p"
species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
Length = 1967
Score = 131 (51.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ Y L+ + P+ES LV++LN+EI L ++++V A+EWL T+ FVR+ NP Y
Sbjct: 691 DHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFTY 750
Query: 61 G 61
G
Sbjct: 751 G 751
Score = 120 (47.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 12 PVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGFPAGLSSEEL 71
PVESSLH+ L +HL +EI +I++ A+++L TF F R NP +YG S+ +
Sbjct: 1537 PVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTYYGIEDDTSTAGV 1596
Query: 72 QSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNTM 123
L S L L L + ++ G DI+ T SI + + I T+
Sbjct: 1597 SEHL----SSLIDSTLENLRESQCVLLH-GDDIVATPFLSISSYYYISHLTI 1643
>MGI|MGI:1925237 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex
subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
Length = 2198
Score = 131 (51.2 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV W+ T+ +VR+ +NP YG
Sbjct: 877 YLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVRWMSYTYLYVRMRANPLAYGI 936
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + G+ T G + F I +
Sbjct: 937 SH--KAYQIDPTLRKHREQLLIEVGQKLDKAKMIRFEERTGY-FSSTDLGRTASHFYIKY 993
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 994 NTIETFNELFDAHK 1007
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1714 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSL 1773
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G S++ ++ G + EL LS + + D I P G I + + + T
Sbjct: 1774 --GDVSQDSINKFLSHLIGQSLVELE-LS-HCIEVGEDNRTIEPLTCGRIASYYYLKHKT 1829
Query: 123 MVAF 126
+ F
Sbjct: 1830 VKMF 1833
>UNIPROTKB|F1NTD6 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
KEGG:gga:421790 Uniprot:F1NTD6
Length = 2211
Score = 130 (50.8 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 885 YLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGI 944
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + GF T G + + I +
Sbjct: 945 SH--KAYQMDPGLEKHREQLVIEVGRKLDKARMIRFEERTGF-FSSTDLGRTASHYYIKY 1001
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 1002 NTIETFNELFDAHK 1015
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1722 YKKFLYEPFPVESSLLDVLADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNL 1781
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLS-RYNLITMNDGFDILPTVTGSIMAKFCIGFN 121
+S + + L S L + L L Y + D I P G I + + +
Sbjct: 1782 D-NVSHDTMNKYL----SSLVEKSLFDLECSYCIEIGEDNRTIEPLTYGRIASYYYLKHP 1836
Query: 122 TMVAF 126
T+ F
Sbjct: 1837 TIGMF 1841
>RGD|1307995 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex subunit
3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
Length = 2197
Score = 129 (50.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 877 YLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWMSYTYLYVRMRANPLAYGI 936
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L+ L + L + +I + G+ T G + + I +
Sbjct: 937 SH--KAYQMDPTLRKHREQLLIEVGQKLDKARMIRFEERTGY-FSSTDLGRTASHYYIKY 993
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 994 NTIETFNELFDAHK 1007
Score = 118 (46.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFNT 122
G S++ ++ G + EL LS + + D I P G I + + + T
Sbjct: 1773 --GDVSQDAINKFLSHLIGQSLVELE-LS-HCIEVGEDNRSIEPLTCGRIASYYYLKHKT 1828
Query: 123 MVAF 126
+ F
Sbjct: 1829 VKMF 1832
>CGD|CAL0003134 [details] [associations]
symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
KEGG:cal:CaO19.3980 Uniprot:Q5AK41
Length = 1929
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
+ Y L+ + P+ES L+++LN+EI L T+++V AV+WL T+ VR+ NP
Sbjct: 663 DHYVSLLTQQHPIESKFGDKLIDNLNAEISLGTVTNVEEAVQWLGYTYMMVRMKQNP--- 719
Query: 61 GFPAGLSSEELQS--RLQGKNSGLCMRELNGLSRYNLITMNDGFDIL-PTVTGSIMAKFC 117
F G+ +ELQ L + + L +I ++ + P G I + F
Sbjct: 720 -FAYGIDWKELQEDPSLTNRRREMVFTCAKRLHHLQMIIFDENSEAFTPKDLGRIASDFY 778
Query: 118 IGFNTMVAF 126
+ N++ F
Sbjct: 779 LLSNSVEIF 787
Score = 103 (41.3 bits), Expect = 0.00048, P = 0.00048
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 12 PVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYG 61
PVESSLH+ L H+ +EI TI+ A+++L TF + R +NP +YG
Sbjct: 1509 PVESSLHKVLDNHIGAEISAGTITTRQEAMDFLTWTFLYRRAHNNPTYYG 1558
>UNIPROTKB|E2QVY0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
Uniprot:E2QVY0
Length = 1925
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 876 YLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGI 935
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L L + L + +I + G+ T G + + I +
Sbjct: 936 SH--KAYQVDPTLAKHREQLVIEVGRKLDKARMIRFEERTGY-FSSTDLGRTASHYYIKY 992
Query: 121 NTMVAFTGWEKAQK 134
NT+ F + A K
Sbjct: 993 NTIETFNEFFDAHK 1006
Score = 117 (46.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMN-DGFDILPTVTGSIMAKFCIGFN 121
+ +S + + L S L + L L I + D I P G I + + +
Sbjct: 1773 -SDVSHDSVNKFL----SSLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQ 1827
Query: 122 TMVAF 126
T+ F
Sbjct: 1828 TVKMF 1832
>UNIPROTKB|F6Y2F0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
Uniprot:F6Y2F0
Length = 2202
Score = 127 (49.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 876 YLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGI 935
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L L + L + +I + G+ T G + + I +
Sbjct: 936 SH--KAYQVDPTLAKHREQLVIEVGRKLDKARMIRFEERTGY-FSSTDLGRTASHYYIKY 992
Query: 121 NTMVAFTGWEKAQK 134
NT+ F + A K
Sbjct: 993 NTIETFNEFFDAHK 1006
Score = 117 (46.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMN-DGFDILPTVTGSIMAKFCIGFN 121
+ +S + + L S L + L L I + D I P G I + + +
Sbjct: 1773 -SDVSHDSVNKFL----SSLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQ 1827
Query: 122 TMVAF 126
T+ F
Sbjct: 1828 TVKMF 1832
>UNIPROTKB|E1BNG3 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 Uniprot:E1BNG3
Length = 2201
Score = 126 (49.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES L ++LN+EI L T+++V AV+W+ T+ +VR+ +NP YG
Sbjct: 876 YLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGI 935
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMND--GFDILPTVTGSIMAKFCIGF 120
+ ++ L L + L + +I + G+ T G + + I +
Sbjct: 936 SH--KAYQIDPTLAKHREQLVIEVGRKLDKARMIRFEERTGY-FSSTDLGRTASHYYIKY 992
Query: 121 NTMVAFTGWEKAQK 134
NT+ F A K
Sbjct: 993 NTIETFNELFDAHK 1006
Score = 117 (46.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y+K + PVESSL L +HLN+EI TI+ A++++ T+FF R++ NP +Y
Sbjct: 1713 YKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNL 1772
Query: 63 PAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMN-DGFDILPTVTGSIMAKFCIGFN 121
+ +S + + L S L + L L I + D I P G I + + +
Sbjct: 1773 -SDVSHDSVNKFL----SNLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQ 1827
Query: 122 TMVAF 126
T+ F
Sbjct: 1828 TVKMF 1832
>POMBASE|SPAC9.03c [details] [associations]
symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
Uniprot:Q9UT24
Length = 2176
Score = 125 (49.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 1 ERYEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHY 60
E Y+K + P+ES L L + SEI +TI AV+WL ++ + R+++NP +Y
Sbjct: 1747 EYYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLVANPAYY 1806
Query: 61 GFPAGLSSEELQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAK-FCIG 119
G ++ E + L S L +N LS LIT++D D + +++A + I
Sbjct: 1807 GLQ-DITHESVSEFL----SDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGIT 1861
Query: 120 FNTMVAF 126
+ TM F
Sbjct: 1862 YITMQTF 1868
Score = 122 (48.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y L+ + P+ES R L + LN+E+ L T+ + V+WL T+ +VR+L +P Y
Sbjct: 918 YLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSV 977
Query: 63 PAGLSSEE--LQSRLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGF 120
++ +Q R +S + E L YN G + T G + A + +
Sbjct: 978 GPEYDDDKYLVQKRADLLHSAAILLEKCKLLVYN---RQSG-TLTATELGKVAASYYVTH 1033
Query: 121 NTMVAF 126
N+M +
Sbjct: 1034 NSMAIY 1039
>SGD|S000000974 [details] [associations]
symbol:BRR2 "RNA-dependent ATPase RNA helicase (DEIH box)"
species:4932 "Saccharomyces cerevisiae" [GO:0005682 "U5 snRNP"
evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000388 "spliceosome
conformational change to release U4 (or U4atac) and U1 (or U11)"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 SGD:S000000974
GO:GO:0005524 GO:GO:0005681 GO:GO:0005682 GO:GO:0003676
EMBL:BK006939 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104562 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
EMBL:U18922 KO:K12854 OrthoDB:EOG4MD17F GO:GO:0046540 GO:GO:0004004
PIR:S50675 RefSeq:NP_011099.1 PDB:3HIB PDB:3IM1 PDB:3IM2
PDBsum:3HIB PDBsum:3IM1 PDBsum:3IM2 ProteinModelPortal:P32639
SMR:P32639 DIP:DIP-850N IntAct:P32639 MINT:MINT-606933
STRING:P32639 PaxDb:P32639 EnsemblFungi:YER172C GeneID:856919
KEGG:sce:YER172C CYGD:YER172c OMA:RDTHESS EvolutionaryTrace:P32639
NextBio:983377 Genevestigator:P32639 GermOnline:YER172C
GO:GO:0000388 Uniprot:P32639
Length = 2163
Score = 120 (47.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 3 YEKLVEGREPVESSLHRHLVEHLNSEIVLKTISDVSVAVEWLRSTFFFVRVLSNPGHYGF 62
Y ++ + P+ES LV++LN+E+V I + AV WL T+ +VR+L++P Y
Sbjct: 898 YLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKV 957
Query: 63 PAGLSSEELQS-RLQGKNSGLCMRELNGLSRYNLITMNDGFDILPTVTGSIMAKFCIGFN 121
P S +L+ R +S LC+ + L Y+ ND + T G+I + F I
Sbjct: 958 PDISSDGQLKKFRESLVHSALCILKEQELVLYD--AENDVIEA--TDLGNIASSFYINHA 1013
Query: 122 TM 123
+M
Sbjct: 1014 SM 1015
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 148 137 0.00091 102 3 11 22 0.42 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 587 (62 KB)
Total size of DFA: 138 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.94u 0.09s 14.03t Elapsed: 00:00:20
Total cpu time: 13.95u 0.09s 14.04t Elapsed: 00:00:24
Start: Thu Aug 15 13:43:29 2013 End: Thu Aug 15 13:43:53 2013