Query psy9274
Match_columns 318
No_of_seqs 393 out of 2921
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:17:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 1.9E-26 6.4E-31 223.2 15.8 145 60-204 30-181 (510)
2 3uon_A Human M2 muscarinic ace 99.9 6.9E-26 2.4E-30 215.3 14.2 141 61-201 22-164 (467)
3 1u19_A Rhodopsin; G protein-co 99.9 6.4E-25 2.2E-29 200.6 19.8 157 59-219 35-193 (349)
4 2rh1_A Beta-2-adrenergic recep 99.9 3E-25 1E-29 214.1 16.6 138 59-196 37-176 (500)
5 3vw7_A Proteinase-activated re 99.9 3.2E-25 1.1E-29 211.8 16.4 158 59-219 17-177 (484)
6 3odu_A C-X-C chemokine recepto 99.9 2.7E-25 9.1E-30 213.3 14.6 154 59-218 45-200 (502)
7 4dkl_A MU-type opioid receptor 99.9 3.6E-25 1.2E-29 210.0 15.0 155 59-218 14-170 (464)
8 3rze_A Histamine H1 receptor, 99.9 5.3E-25 1.8E-29 208.3 13.7 138 61-198 7-146 (452)
9 2lnl_A C-X-C chemokine recepto 99.9 2.1E-24 7.1E-29 193.8 16.4 140 62-204 11-152 (296)
10 2ks9_A Substance-P receptor; w 99.9 4.1E-24 1.4E-28 196.9 18.0 152 62-219 32-185 (364)
11 4amj_A Beta-1 adrenergic recep 99.9 1.1E-24 3.9E-29 195.8 13.6 146 56-201 5-152 (315)
12 4ea3_A Fusion protein of nocic 99.9 4.1E-24 1.4E-28 202.4 16.8 157 58-219 121-279 (434)
13 2z73_A Rhodopsin; visual pigme 99.9 5.3E-24 1.8E-28 202.1 17.5 158 59-219 31-191 (448)
14 3v2y_A Sphingosine 1-phosphate 99.9 3E-24 1E-28 208.2 15.5 139 62-202 63-203 (520)
15 3eml_A Human adenosine A2A rec 99.9 2.7E-24 9.4E-29 205.2 14.5 141 62-204 21-163 (488)
16 3pbl_A D(3) dopamine receptor, 99.9 1.9E-24 6.5E-29 206.2 12.7 140 62-201 38-183 (481)
17 4eiy_A Adenosine receptor A2A/ 99.9 3.8E-24 1.3E-28 202.1 12.9 142 59-202 28-171 (447)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 1.1E-23 3.7E-28 203.8 12.6 139 60-198 180-320 (514)
19 1hll_A Alpha-2A adrenergic rec 98.6 3E-09 1E-13 62.1 -0.2 31 146-176 2-32 (32)
20 2lot_A Apelin receptor; membra 96.9 6.7E-05 2.3E-09 50.4 -1.7 31 64-94 30-60 (64)
21 3uon_A Human M2 muscarinic ace 72.1 28 0.00097 31.4 10.8 25 175-199 384-408 (467)
22 2ayu_A Nucleosome assembly pro 56.1 3.1 0.0001 38.4 0.7 8 213-220 271-278 (417)
23 3rze_A Histamine H1 receptor, 45.7 69 0.0023 28.6 8.2 26 174-199 368-393 (452)
24 2lnl_A C-X-C chemokine recepto 40.0 1.2E+02 0.0041 25.2 8.5 40 159-198 194-233 (296)
25 2l2t_A Receptor tyrosine-prote 39.5 43 0.0015 20.2 3.8 13 82-94 28-40 (44)
26 3bbo_G Ribosomal protein L4; l 37.1 7.2 0.00024 34.0 0.0 7 231-237 235-241 (293)
27 2ks1_B Epidermal growth factor 32.8 29 0.001 20.9 2.2 13 82-94 29-41 (44)
28 2jwa_A Receptor tyrosine-prote 32.4 50 0.0017 19.8 3.2 11 82-92 29-39 (44)
29 3pbl_A D(3) dopamine receptor, 31.4 2.3E+02 0.008 25.2 9.5 26 174-199 396-421 (481)
30 3tj1_A RNA polymerase I-specif 30.5 11 0.00038 36.7 0.1 6 100-105 161-166 (649)
31 2iu1_A EIF5, eukaryotic transl 29.5 24 0.00082 29.1 2.0 11 150-160 81-91 (208)
32 3sn6_R Lysozyme, beta-2 adrene 28.7 1.3E+02 0.0044 27.6 7.3 24 175-198 418-441 (514)
33 3odu_A C-X-C chemokine recepto 26.9 1.5E+02 0.005 26.8 7.3 34 59-92 48-81 (502)
34 3arc_I Photosystem II reaction 24.9 63 0.0021 18.6 2.5 17 64-80 10-26 (38)
35 3vw7_A Proteinase-activated re 23.6 2.7E+02 0.0094 24.7 8.4 23 175-197 386-408 (484)
36 2rh1_A Beta-2-adrenergic recep 23.5 4.1E+02 0.014 24.0 11.4 25 175-199 404-428 (500)
37 4g1u_A Hemin transport system 22.7 3.3E+02 0.011 24.2 8.3 32 84-116 157-188 (357)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.94 E-value=1.9e-26 Score=223.23 Aligned_cols=145 Identities=23% Similarity=0.495 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCC---chHHHHHHHHHHHHHHHHhhhHHHHHHHHhh--cCCcchhHH
Q psy9274 60 MVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMR---STTNLLIINLAIADLLFIVCCVPFTATDYVT--TCWPFGDVW 134 (318)
Q Consensus 60 ~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~---~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~--~~~~~~~~~ 134 (318)
..++++.+++++++++|++||++|++++.++|++| +++|+|++|||+||++++++.+|+.+...+. ..|.++..+
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~ 109 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAG 109 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHH
Confidence 34778889999999999999999999999876554 7899999999999999999999999887654 469999999
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceee
Q psy9274 135 CKM--YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSY 204 (318)
Q Consensus 135 C~~--~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~ 204 (318)
|++ ++..++..+|++++++||+|||+||++|++|++++|++++.++++++|++++++++|++++++....
T Consensus 110 C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~ 181 (510)
T 4grv_A 110 CRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNR 181 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhccccc
Confidence 999 8888999999999999999999999999999999999999999999999999999999998876554
No 2
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.93 E-value=6.9e-26 Score=215.30 Aligned_cols=141 Identities=26% Similarity=0.458 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--H
Q psy9274 61 VSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM--Y 138 (318)
Q Consensus 61 ~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~--~ 138 (318)
..+++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.....+.|.++...|++ +
T Consensus 22 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 101 (467)
T 3uon_A 22 EVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLA 101 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHH
Confidence 36788899999999999999999999999999999999999999999999999999999999988899999999999 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCc
Q psy9274 139 LIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGE 201 (318)
Q Consensus 139 ~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~ 201 (318)
+..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|+++++..
T Consensus 102 ~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 164 (467)
T 3uon_A 102 LDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQF 164 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 888999999999999999999999999999999999999999999999999999999887654
No 3
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.93 E-value=6.4e-25 Score=200.65 Aligned_cols=157 Identities=20% Similarity=0.409 Sum_probs=138.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH-
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM- 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~- 137 (318)
.....++++++.+++++|++||+++++++.+++++|++.|+|++|||++|++++++.+|..+.....+.|.++...|++
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 114 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLE 114 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHH
Confidence 4456788899999999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeEe
Q psy9274 138 -YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACVF 216 (318)
Q Consensus 138 -~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~~ 216 (318)
++..++..+|++++++||+|||+||++|++|++ ++++++..+++++|++++++++|+++++...... .....|..
T Consensus 115 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~---~~~~~C~~ 190 (349)
T 1u19_A 115 GFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE---GMQCSCGI 190 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEE---TTTTEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeecc---CCceeecc
Confidence 788888999999999999999999999999977 6899999999999999999999999877654332 22446765
Q ss_pred ecC
Q psy9274 217 LDL 219 (318)
Q Consensus 217 ~~~ 219 (318)
.+.
T Consensus 191 ~~~ 193 (349)
T 1u19_A 191 DYY 193 (349)
T ss_dssp CCS
T ss_pred ccc
Confidence 443
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.93 E-value=3e-25 Score=214.09 Aligned_cols=138 Identities=32% Similarity=0.573 Sum_probs=128.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH-
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM- 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~- 137 (318)
....+++++++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+...+.+.|.++...|++
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~ 116 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFW 116 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHH
Confidence 3446778899999999999999999999999999999999999999999999999999999998888899999999998
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhH
Q psy9274 138 -YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVF 196 (318)
Q Consensus 138 -~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~ 196 (318)
++..++..+|++++++||+|||+||++|++|+++++++++.++++++|+++++++++|+
T Consensus 117 ~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~ 176 (500)
T 2rh1_A 117 TSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPI 176 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcch
Confidence 78888999999999999999999999999999999999999999999999999996444
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.93 E-value=3.2e-25 Score=211.76 Aligned_cols=158 Identities=26% Similarity=0.474 Sum_probs=131.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHH-hhcCCcchhHHHHH
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDY-VTTCWPFGDVWCKM 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~-~~~~~~~~~~~C~~ 137 (318)
....+++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++++++ +|+.+... ....|.++...|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhH
Confidence 45578899999999999999999999999999999999999999999999999875 55554444 44589999999999
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeE
Q psy9274 138 --YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACV 215 (318)
Q Consensus 138 --~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~ 215 (318)
++..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|+++++...... ......|.
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~--~~~~~~C~ 173 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVP--GLGITTCH 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEET--TTTEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccC--CCCCceee
Confidence 88888999999999999999999999999999999999999999999999999999999887655432 34456675
Q ss_pred eecC
Q psy9274 216 FLDL 219 (318)
Q Consensus 216 ~~~~ 219 (318)
..+.
T Consensus 174 ~~~~ 177 (484)
T 3vw7_A 174 DVLS 177 (484)
T ss_dssp SSCS
T ss_pred ccCC
Confidence 4443
No 6
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.92 E-value=2.7e-25 Score=213.29 Aligned_cols=154 Identities=32% Similarity=0.584 Sum_probs=136.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH-
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM- 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~- 137 (318)
...++++.+++.+++++|++||++|++++.+++++|+++|+|++|||++|++++ +.+|+.+..... .|.++...|++
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~ 122 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAV 122 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhH
Confidence 345788899999999999999999999999999999999999999999999996 588888876654 79999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeEe
Q psy9274 138 -YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACVF 216 (318)
Q Consensus 138 -~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~~ 216 (318)
++..++..+|++++++||+|||+||++|++|++.++++++.++++++|++++++++|++++......+ ....|..
T Consensus 123 ~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~----~~~~C~~ 198 (502)
T 3odu_A 123 HVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEAD----DRYICDR 198 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECS----SSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccC----CceEEee
Confidence 88888999999999999999999999999999999999999999999999999999998876554332 3566764
Q ss_pred ec
Q psy9274 217 LD 218 (318)
Q Consensus 217 ~~ 218 (318)
.+
T Consensus 199 ~~ 200 (502)
T 3odu_A 199 FY 200 (502)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.92 E-value=3.6e-25 Score=209.99 Aligned_cols=155 Identities=32% Similarity=0.624 Sum_probs=137.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH-
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM- 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~- 137 (318)
....+++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++ +|+.+.....+.|.++...|++
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhH
Confidence 34478889999999999999999999999999999999999999999999999886 9999888888899999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeEe
Q psy9274 138 -YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACVF 216 (318)
Q Consensus 138 -~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~~ 216 (318)
++..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|+++........ ....|..
T Consensus 93 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~----~~~~c~~ 168 (464)
T 4dkl_A 93 ISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQ----GSIDCTL 168 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEET----TEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccC----CCceEEe
Confidence 88889999999999999999999999999999999999999999999999999999998765543332 2455654
Q ss_pred ec
Q psy9274 217 LD 218 (318)
Q Consensus 217 ~~ 218 (318)
.+
T Consensus 169 ~~ 170 (464)
T 4dkl_A 169 TF 170 (464)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 8
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.92 E-value=5.3e-25 Score=208.31 Aligned_cols=138 Identities=22% Similarity=0.441 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--H
Q psy9274 61 VSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM--Y 138 (318)
Q Consensus 61 ~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~--~ 138 (318)
..+++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.....+.|.++...|++ +
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 86 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLS 86 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999988899999999999 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhh
Q psy9274 139 LIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNM 198 (318)
Q Consensus 139 ~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~ 198 (318)
+..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|.+..
T Consensus 87 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~ 146 (452)
T 3rze_A 87 MDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGW 146 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999999999999999998886543
No 9
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=193.75 Aligned_cols=140 Identities=30% Similarity=0.560 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--HH
Q psy9274 62 SIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM--YL 139 (318)
Q Consensus 62 ~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~--~~ 139 (318)
++++.+++.+++++|++||+++++++.++|++|+++|+|++|||++|+++++ .+|+.+.... ..|.++...|++ ++
T Consensus 11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~~~~ 88 (296)
T 2lnl_A 11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSLL 88 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHHhhh
Confidence 6678888999999999999999999999999999999999999999999987 5676666544 569999999998 78
Q ss_pred HHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceee
Q psy9274 140 IVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSY 204 (318)
Q Consensus 140 ~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~ 204 (318)
..++..+|++++++||+|||+||++|++|+... ++++..+++++|+++++.++|+++++.....
T Consensus 89 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~ 152 (296)
T 2lnl_A 89 KEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP 152 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCC
T ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecC
Confidence 888999999999999999999999999998754 4667778889999999999999887765443
No 10
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.92 E-value=4.1e-24 Score=196.89 Aligned_cols=152 Identities=21% Similarity=0.455 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--HH
Q psy9274 62 SIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM--YL 139 (318)
Q Consensus 62 ~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~--~~ 139 (318)
..+.++++.+++++|++||+++++++.++|++|+++|+|++|||++|++++++.+|..+.....+.|.++...|++ ++
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 111 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFF 111 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHH
Confidence 4556888999999999999999999999999999999999999999999999899998888888899999999999 78
Q ss_pred HHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeEeecC
Q psy9274 140 IVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACVFLDL 219 (318)
Q Consensus 140 ~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~~~~~ 219 (318)
..++..+|++++++||+|||+||++|++|+ .+++++..+++++|++++++++|++..... .. ......|...+.
T Consensus 112 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~-~~---~~~~~~C~~~~~ 185 (364)
T 2ks9_A 112 PIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTT-ET---MPSRVVCMIEWP 185 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCC-CB---CTTCSSBCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhh-ee---cCCCCEEeecCC
Confidence 888999999999999999999999999986 488899999999999999999988754332 21 123455765443
No 11
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.92 E-value=1.1e-24 Score=195.80 Aligned_cols=146 Identities=29% Similarity=0.461 Sum_probs=134.7
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHH
Q psy9274 56 AMERMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWC 135 (318)
Q Consensus 56 ~~~~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C 135 (318)
..+.....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.++...|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C 84 (315)
T 4amj_A 5 LLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLC 84 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHH
Confidence 34455678889999999999999999999999999999999999999999999999998999999988888999999999
Q ss_pred HH--HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCc
Q psy9274 136 KM--YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGE 201 (318)
Q Consensus 136 ~~--~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~ 201 (318)
++ ++..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|+++....
T Consensus 85 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 152 (315)
T 4amj_A 85 ELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWW 152 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhc
Confidence 99 7888899999999999999999999999999998999999999999999999999888876543
No 12
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.91 E-value=4.1e-24 Score=202.39 Aligned_cols=157 Identities=30% Similarity=0.545 Sum_probs=130.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH
Q psy9274 58 ERMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM 137 (318)
Q Consensus 58 ~~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~ 137 (318)
+...++++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++ ++.+|+.+.....+.|.++...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 455678888999999999999999999999999999999999999999999998 5588999888888889999999999
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeE
Q psy9274 138 --YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACV 215 (318)
Q Consensus 138 --~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~ 215 (318)
++..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|+++.... .. ......|.
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~-~~---~~~~~~c~ 275 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA-QV---EDEEIECL 275 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEE-CC---CSSCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeee-Ee---ecCceeEE
Confidence 8888899999999999999999999999999999999999999999999999999988775332 22 12245676
Q ss_pred eecC
Q psy9274 216 FLDL 219 (318)
Q Consensus 216 ~~~~ 219 (318)
....
T Consensus 276 ~~~~ 279 (434)
T 4ea3_A 276 VEIP 279 (434)
T ss_dssp ECCC
T ss_pred EecC
Confidence 5543
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.91 E-value=5.3e-24 Score=202.08 Aligned_cols=158 Identities=26% Similarity=0.471 Sum_probs=139.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhh-HHHHHHHHhhcCCcchhHHHHH
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCC-VPFTATDYVTTCWPFGDVWCKM 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~-~p~~~~~~~~~~~~~~~~~C~~ 137 (318)
....+++.+++.+++++|++||+++++++.|+|++|++.|+|++|||++|++++++. +|+.+.....+.|.++...|++
T Consensus 31 ~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~ 110 (448)
T 2z73_A 31 DAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKV 110 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHH
Confidence 345678889999999999999999999999999999999999999999999998864 8888888778889999999999
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceeeeeCCCcceeeE
Q psy9274 138 --YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSYTYASELHTACV 215 (318)
Q Consensus 138 --~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~C~ 215 (318)
++..++..+|++++++||+|||++|++|++|+++++++++.++++++|++++++++++++.++..... .....|.
T Consensus 111 ~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~---~~~~~c~ 187 (448)
T 2z73_A 111 YGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE---GVLCNCS 187 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEEC---TTSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeec---CCceeEe
Confidence 78888899999999999999999999999999999999999999999999999999998877665442 2345676
Q ss_pred eecC
Q psy9274 216 FLDL 219 (318)
Q Consensus 216 ~~~~ 219 (318)
+.+.
T Consensus 188 ~~~~ 191 (448)
T 2z73_A 188 FDYI 191 (448)
T ss_dssp ECCS
T ss_pred cccc
Confidence 6543
No 14
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.91 E-value=3e-24 Score=208.21 Aligned_cols=139 Identities=15% Similarity=0.201 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--HH
Q psy9274 62 SIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM--YL 139 (318)
Q Consensus 62 ~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~--~~ 139 (318)
..++.+++++++++|++||++|++++.+++++|+++|+|++|||++|++++++.+|..+.. ....|.++...|++ ++
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHH
Confidence 4788899999999999999999999999999999999999999999999999888877766 55678889999998 78
Q ss_pred HHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCce
Q psy9274 140 IVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEV 202 (318)
Q Consensus 140 ~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~ 202 (318)
..++.++|++++++||+|||+||+ |++|+.+++++++.++++++|++++++++|+++++..+
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~ 203 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI 203 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc
Confidence 888999999999999999999999 99999999999999999999999999999998877653
No 15
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.91 E-value=2.7e-24 Score=205.19 Aligned_cols=141 Identities=23% Similarity=0.343 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--HH
Q psy9274 62 SIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM--YL 139 (318)
Q Consensus 62 ~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~--~~ 139 (318)
..++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.... .|.++...|++ ++
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~~ 98 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACF 98 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHH
Confidence 568888999999999999999999999999999999999999999999999989998877543 67788899999 78
Q ss_pred HHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCceee
Q psy9274 140 IVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEVSY 204 (318)
Q Consensus 140 ~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~ 204 (318)
..++..+|++++++||+|||+||++|++|+++++++++.++++++|++++++++|+++++.....
T Consensus 99 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~ 163 (488)
T 3eml_A 99 VLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ 163 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 88899999999999999999999999999999999999999999999999999999987765443
No 16
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.91 E-value=1.9e-24 Score=206.24 Aligned_cols=140 Identities=28% Similarity=0.480 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhh-cCCcchhHHHHH--H
Q psy9274 62 SIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVT-TCWPFGDVWCKM--Y 138 (318)
Q Consensus 62 ~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~-~~~~~~~~~C~~--~ 138 (318)
+.++++++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+...+. ..|.++...|++ +
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~ 117 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVT 117 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHH
Confidence 5677888999999999999999999999999999999999999999999999899998877766 579999999999 7
Q ss_pred HHHHHHHHHHHHHHHHHHHhheeeeccCcc---ccccchhhHHHHHHHHHHHHHHHHhhhHhhcCc
Q psy9274 139 LIVVTAYASVYTLVLMSLDRFLAVVHPIAS---MSVRTERNALKAILITWIVIVLTAVPVFNMHGE 201 (318)
Q Consensus 139 ~~~~~~~~s~~~l~~isidRy~aI~~P~~y---~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~ 201 (318)
+..++..+|++++++||+|||+||++|++| .+..+++++.++++++|++++++++|+++++..
T Consensus 118 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 183 (481)
T 3pbl_A 118 LDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT 183 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecc
Confidence 888899999999999999999999999999 677888999999999999999999999887654
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.91 E-value=3.8e-24 Score=202.12 Aligned_cols=142 Identities=24% Similarity=0.346 Sum_probs=128.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH-
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM- 137 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~- 137 (318)
.....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+... ..|..+...|++
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~ 105 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFI 105 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHH
Confidence 34466888899999999999999999999999999999999999999999999998999877743 367778899998
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhhcCce
Q psy9274 138 -YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNMHGEV 202 (318)
Q Consensus 138 -~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~ 202 (318)
++..++..+|++++++||+|||+||++|++|+++++++++..+++++|++++++++|+++++...
T Consensus 106 ~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~ 171 (447)
T 4eiy_A 106 ACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNC 171 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccc
Confidence 78888899999999999999999999999999999999999999999999999999999877653
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.90 E-value=1.1e-23 Score=203.77 Aligned_cols=139 Identities=33% Similarity=0.588 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCcchhHHHHH--
Q psy9274 60 MVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQMRSTTNLLIINLAIADLLFIVCCVPFTATDYVTTCWPFGDVWCKM-- 137 (318)
Q Consensus 60 ~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~p~~~~~~~~~~~~~~~~~C~~-- 137 (318)
...+++++++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.....+.|.++...|++
T Consensus 180 ~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 259 (514)
T 3sn6_R 180 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWT 259 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHH
Confidence 346778899999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhheeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhh
Q psy9274 138 YLIVVTAYASVYTLVLMSLDRFLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNM 198 (318)
Q Consensus 138 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~ 198 (318)
++..++..+|++++++||+|||++|++|++|+++++++++..+++++|++++++++++++.
T Consensus 260 ~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~ 320 (514)
T 3sn6_R 260 SIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQM 320 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 7888899999999999999999999999999998999999999999999999999766644
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.64 E-value=3e-09 Score=62.14 Aligned_cols=31 Identities=32% Similarity=0.472 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhheeeeccCccccccchhh
Q psy9274 146 ASVYTLVLMSLDRFLAVVHPIASMSVRTERN 176 (318)
Q Consensus 146 ~s~~~l~~isidRy~aI~~P~~y~~~~t~~~ 176 (318)
+|++++++||+|||+||++|++|+..+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999988777653
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.90 E-value=6.7e-05 Score=50.39 Aligned_cols=31 Identities=26% Similarity=0.508 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCCCC
Q psy9274 64 IVPIFFGIIIILGFFGNALVVVVVAFNQQMR 94 (318)
Q Consensus 64 ~~~~~~~ii~~~gi~gN~lvi~~i~~~~~l~ 94 (318)
++++++.+++++|++||++|++++.++|..+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 7788999999999999999999999887543
No 21
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=72.08 E-value=28 Score=31.35 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=13.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHhhc
Q psy9274 175 RNALKAILITWIVIVLTAVPVFNMH 199 (318)
Q Consensus 175 ~~~~~~i~~~W~~s~~~~~p~~~~~ 199 (318)
+++..+++++-+..+++-+|..+..
T Consensus 384 ~k~~k~l~~iv~~F~icw~P~~i~~ 408 (467)
T 3uon_A 384 KKVTRTILAILLAFIITWAPYNVMV 408 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4555555555555555556655543
No 22
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=56.14 E-value=3.1 Score=38.36 Aligned_cols=8 Identities=25% Similarity=0.269 Sum_probs=3.8
Q ss_pred eeEeecCC
Q psy9274 213 ACVFLDLD 220 (318)
Q Consensus 213 ~C~~~~~~ 220 (318)
.|.+.|..
T Consensus 271 gt~I~WK~ 278 (417)
T 2ayu_A 271 GCEISWKD 278 (417)
T ss_dssp ECCCCBSC
T ss_pred Ccceeeec
Confidence 44455544
No 23
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=45.69 E-value=69 Score=28.56 Aligned_cols=26 Identities=27% Similarity=0.382 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhc
Q psy9274 174 ERNALKAILITWIVIVLTAVPVFNMH 199 (318)
Q Consensus 174 ~~~~~~~i~~~W~~s~~~~~p~~~~~ 199 (318)
.+++..+++++.+..+++.+|..+..
T Consensus 368 ~~k~~k~l~~vv~~f~icwlP~~i~~ 393 (452)
T 3rze_A 368 ERKAAKQLGFIMAAFILCWIPYFIFF 393 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34555556665555566666665543
No 24
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=40.05 E-value=1.2e+02 Score=25.18 Aligned_cols=40 Identities=10% Similarity=0.221 Sum_probs=21.5
Q ss_pred heeeeccCccccccchhhHHHHHHHHHHHHHHHHhhhHhh
Q psy9274 159 FLAVVHPIASMSVRTERNALKAILITWIVIVLTAVPVFNM 198 (318)
Q Consensus 159 y~aI~~P~~y~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~ 198 (318)
|..+.+.++.+....++|+...++.+-+.-++..+|..+.
T Consensus 194 y~~i~~~~~~~~~~~~~k~~~~~~~v~~~f~icw~P~~i~ 233 (296)
T 2lnl_A 194 YGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLV 233 (296)
T ss_dssp HHHHTTTSSSCCCHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhhheeeeehHHHHH
Confidence 4444454544444455666666665555555555665443
No 25
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=39.51 E-value=43 Score=20.16 Aligned_cols=13 Identities=15% Similarity=0.273 Sum_probs=6.2
Q ss_pred HhhhhhhccCCCC
Q psy9274 82 LVVVVVAFNQQMR 94 (318)
Q Consensus 82 lvi~~i~~~~~l~ 94 (318)
+++++++|+|+.+
T Consensus 28 ~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 28 LTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHTTCSS
T ss_pred HHHHHHhhhhhhh
Confidence 4444555555433
No 26
>3bbo_G Ribosomal protein L4; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=37.06 E-value=7.2 Score=34.02 Aligned_cols=7 Identities=29% Similarity=0.534 Sum_probs=2.6
Q ss_pred ccccccc
Q psy9274 231 TIFQSEN 237 (318)
Q Consensus 231 ~if~i~~ 237 (318)
.+|.+.+
T Consensus 235 NvydLl~ 241 (293)
T 3bbo_G 235 NLFDVLN 241 (293)
T ss_dssp CHHHHHH
T ss_pred eHHHhhC
Confidence 3333333
No 27
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=32.79 E-value=29 Score=20.90 Aligned_cols=13 Identities=8% Similarity=0.054 Sum_probs=6.2
Q ss_pred HhhhhhhccCCCC
Q psy9274 82 LVVVVVAFNQQMR 94 (318)
Q Consensus 82 lvi~~i~~~~~l~ 94 (318)
++++.++|+|+.+
T Consensus 29 ~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 29 LGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHTTTCC
T ss_pred HHHHHHhhhhHhh
Confidence 4444555555433
No 28
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=32.38 E-value=50 Score=19.85 Aligned_cols=11 Identities=18% Similarity=0.223 Sum_probs=4.5
Q ss_pred HhhhhhhccCC
Q psy9274 82 LVVVVVAFNQQ 92 (318)
Q Consensus 82 lvi~~i~~~~~ 92 (318)
+++.+++|+|+
T Consensus 29 l~~~~~~RRR~ 39 (44)
T 2jwa_A 29 VVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHhheehhh
Confidence 33344444443
No 29
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=31.44 E-value=2.3e+02 Score=25.18 Aligned_cols=26 Identities=23% Similarity=0.392 Sum_probs=14.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhc
Q psy9274 174 ERNALKAILITWIVIVLTAVPVFNMH 199 (318)
Q Consensus 174 ~~~~~~~i~~~W~~s~~~~~p~~~~~ 199 (318)
.+++..+++++-+..+++.+|..+..
T Consensus 396 ~~k~~k~l~~iv~~F~icw~P~~i~~ 421 (481)
T 3pbl_A 396 EKKATQMVAIVLGAFIVCWLPFFLTH 421 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHH
Confidence 45555556665555566666665543
No 30
>3tj1_A RNA polymerase I-specific transcription initiatio RRN3; heat repeat, transcription factor, nucleus; 2.85A {Saccharomyces cerevisiae}
Probab=30.48 E-value=11 Score=36.71 Aligned_cols=6 Identities=33% Similarity=0.312 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy9274 100 LIINLA 105 (318)
Q Consensus 100 ll~~La 105 (318)
|+.+|+
T Consensus 161 FL~~Lv 166 (649)
T 3tj1_A 161 FIKILC 166 (649)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 31
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding, phosphorylation, protein biosynthesis, translation inititation; 1.8A {Homo sapiens}
Probab=29.46 E-value=24 Score=29.08 Aligned_cols=11 Identities=18% Similarity=0.338 Sum_probs=5.8
Q ss_pred HHHHHHHHhhe
Q psy9274 150 TLVLMSLDRFL 160 (318)
Q Consensus 150 ~l~~isidRy~ 160 (318)
..++.++++|+
T Consensus 81 ~~lL~alE~~~ 91 (208)
T 2iu1_A 81 RYLLHGLECVV 91 (208)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34455566654
No 32
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=28.69 E-value=1.3e+02 Score=27.62 Aligned_cols=24 Identities=29% Similarity=0.336 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHhh
Q psy9274 175 RNALKAILITWIVIVLTAVPVFNM 198 (318)
Q Consensus 175 ~~~~~~i~~~W~~s~~~~~p~~~~ 198 (318)
+++..+++++-++.+++.+|..+.
T Consensus 418 ~r~~~~l~~iv~~F~lcwlP~~i~ 441 (514)
T 3sn6_R 418 HKALKTLGIIMGTFTLCWLPFFIV 441 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445544444445555555443
No 33
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=26.87 E-value=1.5e+02 Score=26.77 Aligned_cols=34 Identities=12% Similarity=-0.120 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC
Q psy9274 59 RMVSIIVPIFFGIIIILGFFGNALVVVVVAFNQQ 92 (318)
Q Consensus 59 ~~~~~~~~~~~~ii~~~gi~gN~lvi~~i~~~~~ 92 (318)
.....++.++..+++++|=+.-+++++.-.+.++
T Consensus 48 ~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~ 81 (502)
T 3odu_A 48 KIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRS 81 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 3444555555666666666666666665554443
No 34
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=24.90 E-value=63 Score=18.57 Aligned_cols=17 Identities=35% Similarity=0.858 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy9274 64 IVPIFFGIIIILGFFGN 80 (318)
Q Consensus 64 ~~~~~~~ii~~~gi~gN 80 (318)
...+++..++++|++.|
T Consensus 10 ~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 10 IVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHccccCC
Confidence 33445555666777665
No 35
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=23.56 E-value=2.7e+02 Score=24.73 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHh
Q psy9274 175 RNALKAILITWIVIVLTAVPVFN 197 (318)
Q Consensus 175 ~~~~~~i~~~W~~s~~~~~p~~~ 197 (318)
+|+..+++++-+..+++-+|..+
T Consensus 386 ~r~~k~l~~v~~~F~icwlP~~i 408 (484)
T 3vw7_A 386 SRALFLSAAVFCIFIICFGPTNV 408 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHH
Confidence 45555555555555555566555
No 36
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=23.53 E-value=4.1e+02 Score=23.99 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHhhc
Q psy9274 175 RNALKAILITWIVIVLTAVPVFNMH 199 (318)
Q Consensus 175 ~~~~~~i~~~W~~s~~~~~p~~~~~ 199 (318)
+++..+++++-+..++.-+|.++..
T Consensus 404 ~ka~ktl~ivv~~F~icWlP~~i~~ 428 (500)
T 2rh1_A 404 HKALKTLGIIMGTFTLCWLPFFIVN 428 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555556555555555556655543
No 37
>4g1u_A Hemin transport system permease protein HMUU; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=22.65 E-value=3.3e+02 Score=24.17 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=21.4
Q ss_pred hhhhhccCCCCchHHHHHHHHHHHHHHHHhhhH
Q psy9274 84 VVVVAFNQQMRSTTNLLIINLAIADLLFIVCCV 116 (318)
Q Consensus 84 i~~i~~~~~l~~~~~~ll~~LaiaDll~~l~~~ 116 (318)
++.+.++++ +++..+.+..++++-++.++..+
T Consensus 157 v~~l~~~~~-~~~~~liL~Giavs~~~~a~~~~ 188 (357)
T 4g1u_A 157 IFTLSRWGH-GNLARLLLAGIAINALCGAAVGV 188 (357)
T ss_dssp HHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccC-CChHHHHHHHHHHHHHHHHHHHH
Confidence 334444433 47788889999998887776544
Done!