BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9275
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y6D9|MD1L1_HUMAN Mitotic spindle assembly checkpoint protein MAD1 OS=Homo sapiens
GN=MAD1L1 PE=1 SV=2
Length = 718
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 142/259 (54%), Gaps = 34/259 (13%)
Query: 45 KEKVDHLTYQMEWRALKGNATFSESA---APPGSDRAKLEVLEKVIEGYRQRMEH----I 97
K++ D L +ME + LK ++ +E + + +D +L+V E +EG R R+E +
Sbjct: 467 KQRADML--EMELKMLKSQSSSAEQSFLFSREEADTLRLKVEE--LEGERSRLEEEKRML 522
Query: 98 EA-----------DQGLVCVIP-GQNSEKVAQQKVQE----LQMEADNNRETVKQMAGMQ 141
EA DQ V+ N VA+Q+++E LQ E + R ++ M+
Sbjct: 523 EAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRGLLR---AME 579
Query: 142 KLNSKIKSLELQGKRLREVYKAAKLNNKIKSLELQGKRLREVYKAASQEFRETVYLLFGY 201
+ + LE L + A+L +++S EL+ +RL+EV++ QEFR+ Y L GY
Sbjct: 580 RGGTVPADLEAAAASLPSSKEVAELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGY 639
Query: 202 KVD-RTNCMYKLASMYADGPDENLLFQSTE---GQLNLIETDYSKVLKPLLDLHLGRHHS 257
++D T Y+L S+YA+ P + L+F++T ++ L+ET++S + L+++HL R S
Sbjct: 640 QIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETEFSHTVGELIEVHLRRQDS 699
Query: 258 IPMLLSALTQELFQRQTMS 276
IP LS+LT ELF RQT++
Sbjct: 700 IPAFLSSLTLELFSRQTVA 718
>sp|Q9WTX8|MD1L1_MOUSE Mitotic spindle assembly checkpoint protein MAD1 OS=Mus musculus
GN=Mad1l1 PE=2 SV=1
Length = 717
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 4/115 (3%)
Query: 164 AKLNNKIKSLELQGKRLREVYKAASQEFRETVYLLFGYKVD-RTNCMYKLASMYADGPDE 222
A+L +++S EL+ +RL+EV++ QEFR+ Y L GY++D T Y+L S YA+ +
Sbjct: 601 AELRKQVESAELKNQRLKEVFQTKIQEFRKVCYTLTGYQIDVTTESQYRLTSRYAEHQTD 660
Query: 223 NLLFQSTE---GQLNLIETDYSKVLKPLLDLHLGRHHSIPMLLSALTQELFQRQT 274
L+F++T ++ L+ET++S+ + L++LHL + SIP LSALT ELF RQT
Sbjct: 661 CLIFKATGPSGSKMQLLETEFSRSVPELIELHLLQQDSIPAFLSALTIELFSRQT 715
>sp|Q80YF0|MD1L1_CRIGR Mitotic spindle assembly checkpoint protein MAD1 OS=Cricetulus
griseus GN=MAD1L1 PE=2 SV=1
Length = 717
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 4/115 (3%)
Query: 164 AKLNNKIKSLELQGKRLREVYKAASQEFRETVYLLFGYKVD-RTNCMYKLASMYADGPDE 222
A+L +++S EL+ +RL+EV++ QEFR+ Y L GY++D T Y+L S YA+ +
Sbjct: 601 AELRKQVESAELKNQRLKEVFQTKIQEFRKVCYTLTGYQIDVTTENQYRLTSRYAEHQSD 660
Query: 223 NLLFQSTE---GQLNLIETDYSKVLKPLLDLHLGRHHSIPMLLSALTQELFQRQT 274
L+F++T ++ L+ET++S+ + L++LHL + SIP LSALT ELF RQT
Sbjct: 661 CLIFKATGPSGSKMQLLETEFSRSVPELIELHLLQQDSIPAFLSALTIELFSRQT 715
>sp|Q6C452|MAD1_YARLI Spindle assembly checkpoint component MAD1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=MAD1 PE=3 SV=1
Length = 704
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 34/209 (16%)
Query: 82 VLEKVIEGYRQRMEHIEADQGLVCVI------PGQNSEKVAQQKVQELQME------ADN 129
+L K E R+E +E Q I P E V Q + L+ E +
Sbjct: 505 LLAKTKEALEARLESLEKSQESRVRILELRENPTSRHEAVKQSMLDTLKAENEALMGKNE 564
Query: 130 NRETVKQMAGMQKLNSKIKSLELQGKRLREVYKAAKLNNKIKSLELQGKRLREVYKAASQ 189
N ++V Q A +++ K LELQG R +K+ S E +RL+EV+ S
Sbjct: 565 NSKSVPQ-ASLER-----KQLELQGVR-----------DKLASTEKSYQRLKEVFSVKSL 607
Query: 190 EFRETVYLLFGYKVD-RTNCMYKLASMYADGPDENLLF---QSTEGQL-NLIETDYSKVL 244
EFRE VY L GY++D N K+ SMYA +++ F + +GQ +I++ +
Sbjct: 608 EFREAVYALTGYQIDILRNKKVKVTSMYAQSDEDSFTFLPDPNHKGQFAGVIDSPLTDEF 667
Query: 245 KPLLDLHLGRHHSIPMLLSALTQELFQRQ 273
++D + P L+AL EL++R+
Sbjct: 668 SNIVDYWVKDKKDFPCFLAALNLELYERK 696
>sp|P87169|MAD1_SCHPO Spindle assembly checkpoint component mad1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mad1 PE=3 SV=1
Length = 689
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 144 NSKIKSLELQGKRLREVYKAAKLNNKIKSLELQGKRLREVYKAASQEFRETVYLLFGYKV 203
+ K+ L +Q ++ E KA L ++ E + +RL+E++ S EFRE V+ LFGYK+
Sbjct: 559 DKKVDCLPIQSFKIAE-RKALDLKKEVAEREKRIQRLKEIFSVKSLEFREAVFSLFGYKL 617
Query: 204 D-RTNCMYKLASMYADGPDENLLFQSTEGQLNLIETDYSKVLKPLLDLHLGRHHSIPMLL 262
D N ++ S Y+ + +F + L+ + L+ +IP +L
Sbjct: 618 DFMPNGSVRVTSTYSREDNTAFIFDGESSTMKLVGNPSGPEFERLIRFWCDERKTIPGML 677
Query: 263 SALTQELFQR 272
+ALT EL +
Sbjct: 678 AALTLELLDK 687
>sp|A6QLU1|GPDM_BOVIN Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Bos taurus
GN=GPD2 PE=2 SV=1
Length = 727
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 30 NRERERDELLREKELKEKVDHLTYQMEWRALKGNATFSESAAPPGSDRAKLEVLEKVIEG 89
RE D+ +E+EL+ L Y+M +++ T DR+++ +L I+
Sbjct: 578 GRELNWDDSKKEEELETARKFLYYEMGYKSRSEQLT----------DRSEISLLPSDIDR 627
Query: 90 YRQRMEHIEADQ-GLVCVIPGQNS-EKVAQQ----KVQELQMEADNNRETVKQMAGMQKL 143
Y++R +ADQ G + ++ Q E + Q + E+ E D N+ ++ +L
Sbjct: 628 YKKRFHKFDADQKGFITIVDVQRVLESIGVQMDENTLHEILNEVDLNKNGQVELNEFLQL 687
Query: 144 NSKIKSLELQGKRLREVYKAAKLN 167
S I+ + G RL + K A+ N
Sbjct: 688 MSAIQKGRVSGSRLAILMKTAEEN 711
>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
Length = 6885
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 72 PPGSDRAKLEVLEKVIEGYRQRMEHIEADQGLVCVIPGQNSEKVAQQKVQELQMEADNNR 131
PPG+D K +V+ G Q + D GL + Q+ A + + +Q + +N+
Sbjct: 6497 PPGTDGGKEG--PRVLNGNPQ-----QEDGGLAGITEQQSG---AFDRWEMIQAQELHNK 6546
Query: 132 ETVKQMAGMQKLNSKIKSLELQGKRLR---EVYKAAKLNNKIKSLELQGKRLREVYKA 186
+KQ +Q+LNS I ++ K+ E+ K AK + I+ +EL+ KRL+E+ KA
Sbjct: 6547 LKIKQ--NLQQLNSDISAITTWLKKTEAELEMLKMAKPPSDIQEIELRVKRLQEILKA 6602
>sp|A7DZP8|GPDM_MESAU Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mesocricetus
auratus GN=GPD2 PE=1 SV=1
Length = 727
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 30 NRERERDELLREKELKEKVDHLTYQMEWRALKGNATFSESAAPPGSDRAKLEVLEKVIEG 89
RE + E+ ++ EL+ L Y+M G+ + SE +DR ++ + IE
Sbjct: 578 GRELDWSEIRKQAELETATKFLYYEM------GSKSRSEQL----TDRTEISLRPSDIER 627
Query: 90 YRQRMEHIEADQ-GLVCVIPGQN-----SEKVAQQKVQELQMEADNNRETVKQMAGMQKL 143
Y +R +AD+ G + ++ Q + K+ + + E+ E D N+ ++ +L
Sbjct: 628 YTKRFHKFDADEKGFITIVDVQRVLENINVKIDENTLHEILSEVDLNKNGQVELNEFLQL 687
Query: 144 NSKIKSLELQGKRLREVYKAAKLN 167
S I+ + G RL + K A+ N
Sbjct: 688 MSAIQKGRVSGSRLAILMKTAEEN 711
>sp|Q874L7|MAD1_KLUDE Spindle assembly checkpoint component MAD1 OS=Kluyveromyces
delphensis GN=MAD1 PE=3 SV=1
Length = 674
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 114 KVAQQKVQELQMEADNNRETVKQMAGMQKLN-SKIKSLELQGKRLREVYKAAKLNNKIKS 172
K+ + QEL + D N+E + + + + N ++I ++ L + E N +K
Sbjct: 514 KIQFARKQELDLLKDENKELLSLIENVTENNQNRIDTIPLSAYKSLEFQYQQSQENVVKG 573
Query: 173 LELQGKRLREVYKAASQEFRETVYLLFGYKVD-RTNCMYKLASMYADGPDE----NLLFQ 227
E Q RL+++Y S EF + V + G++++ + K+ S Y PD+ NL+
Sbjct: 574 -EKQLSRLKQIYNKKSLEFIDIVNSMLGFRLEFMLDGRVKIYSCYK--PDKYLIANLIDN 630
Query: 228 STEGQLNLIETDYSKVLKPLLDLHLGRHHSIPMLLSALTQELFQ 271
+ + L+ I +D+ + LL L + +P L+ +T L++
Sbjct: 631 TLKSNLDAIISDWDE----LLSLWVVERGQLPCFLATITLRLWE 670
>sp|P43304|GPDM_HUMAN Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Homo sapiens
GN=GPD2 PE=1 SV=3
Length = 727
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 30 NRERERDELLREKELKEKVDHLTYQMEWRALKGNATFSESAAPPGSDRAKLEVLEKVIEG 89
RE D+ ++++L+ L Y+M +++ T DR+++ +L I+
Sbjct: 578 GRELNWDDYKKQEQLETARKFLYYEMGYKSRSEQLT----------DRSEISLLPSDIDR 627
Query: 90 YRQRMEHIEADQ-GLVCVIPGQN-----SEKVAQQKVQELQMEADNNRETVKQMAGMQKL 143
Y++R +ADQ G + ++ Q + ++ + + E+ E D N+ ++ +L
Sbjct: 628 YKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQL 687
Query: 144 NSKIKSLELQGKRLREVYKAAKLN 167
S I+ + G RL + K A+ N
Sbjct: 688 MSAIQKGRVSGSRLAILMKTAEEN 711
>sp|B4N1C2|HOOK_DROWI Protein hook OS=Drosophila willistoni GN=hk PE=3 SV=2
Length = 692
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 63 NATFSESAAPPGSDRAKLEVLEKVIEGYRQRMEHIEADQGLVCVIPGQN--SEKVAQQKV 120
NA F + A + + ++E+ +K I+ +++ IE+ + + +N S+ +A Q+
Sbjct: 366 NAQFEDDAKRYANTKGQIELFKKEIQDLHSKLD-IESGKNVKLEFDNKNLESKNLALQRA 424
Query: 121 QE-LQMEADNNRETVKQMAGMQKLNSKIKSLELQGKRLREVYKAAKLNNKIKSLELQGKR 179
+E L E DN RETV ++ N+ + ++G + + + +KI+ LE + K
Sbjct: 425 KESLVKERDNLRETVDELKCGHLTNNSGLTGCVEGTTMSRELQPTAMMDKIQRLEAENKA 484
Query: 180 LRE 182
LRE
Sbjct: 485 LRE 487
>sp|Q6CMM2|MAD1_KLULA Spindle assembly checkpoint component MAD1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=MAD1 PE=3 SV=1
Length = 648
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 158 REVYKAAK-----LNNKIKSLELQGKRLREVYKAASQEFRETVYLLFGYKVD-RTNCMYK 211
R VY K L +I S + RL+EV+ S EF E V L G+K++ + K
Sbjct: 527 RSVYDRIKHDMKLLEKEIFSANKKTTRLKEVFNKKSLEFIEAVNSLLGFKLEFLAHGKVK 586
Query: 212 LASMYADGPDENLLFQSTEGQLNLIETDYSKVL---KPLLDLHLGRHHSIPMLLSALTQE 268
L S Y P++ ++ + Q N +++D KV+ + L L++ +P LS +
Sbjct: 587 LVSCYQ--PNKYII---ADLQSNTLKSDLDKVIPEWETLFQLYVIEKGELPAFLSQVKLR 641
Query: 269 LFQ 271
L++
Sbjct: 642 LWE 644
>sp|Q9TUG2|SKI_HORSE Ski oncogene OS=Equus caballus GN=SKI PE=2 SV=1
Length = 730
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 9 LKGKSTLKVLVILVELGYLSSNRERERDELLREKELKEKVDHLTYQME---WRALKGNAT 65
L+ K + ++ + V+L + ++RE+ R +LLRE+E +E ++ + +++ W + AT
Sbjct: 661 LRAKYSAQIEDLQVKLQHAEADREQLRADLLREREAREHLEKVVKELQEQLWPRPRSEAT 720
Query: 66 FSESAA 71
ES A
Sbjct: 721 GGESTA 726
>sp|Q4R755|GPDM_MACFA Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Macaca
fascicularis GN=GPD2 PE=2 SV=1
Length = 727
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 30 NRERERDELLREKELKEKVDHLTYQMEWRALKGNATFSESAAPPGSDRAKLEVLEKVIEG 89
RE D+ ++++L+ L Y+M +++ T DR+++ +L I+
Sbjct: 578 GRELNWDDHKKQEQLETAKKFLYYEMGYKSRSEQLT----------DRSEISLLPSDIDR 627
Query: 90 YRQRMEHIEAD-QGLVCVIPGQN-----SEKVAQQKVQELQMEADNNRETVKQMAGMQKL 143
Y++R +AD +G + ++ Q + ++ + + E+ E D N+ ++ +L
Sbjct: 628 YKKRFHKFDADKKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQL 687
Query: 144 NSKIKSLELQGKRLREVYKAAKLN 167
S I+ + G RL + K A+ N
Sbjct: 688 MSAIQKGRVSGSRLAILMKTAEEN 711
>sp|P12755|SKI_HUMAN Ski oncogene OS=Homo sapiens GN=SKI PE=1 SV=1
Length = 728
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 9 LKGKSTLKVLVILVELGYLSSNRERERDELLREKELKEKVDHLTYQME---WRALKGNAT 65
L+ K + ++ + V+L + ++RE+ R +LLRE+E +E ++ + +++ W + A
Sbjct: 659 LRAKYSAQIEDLQVKLQHAEADREQLRADLLREREAREHLEKVVKELQEQLWPRARPEAA 718
Query: 66 FSESAA 71
SE AA
Sbjct: 719 GSEGAA 724
>sp|P35571|GPDM_RAT Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Gpd2 PE=1 SV=1
Length = 727
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 30 NRERERDELLREKELKEKVDHLTYQMEWRALKGNATFSESAAPPGSDRAKLEVLEKVIEG 89
RE EL +++EL+ L Y+M +++ T D ++ +L I+
Sbjct: 578 GRELNWSELRKQEELETATRFLYYEMGYKSRTEQLT----------DSTEISLLPPDIDR 627
Query: 90 YRQRMEHIEADQ-GLVCVIPGQN-----SEKVAQQKVQELQMEADNNRETVKQMAGMQKL 143
Y++R + D+ G + ++ Q + ++ + + E+ E D N+ ++ +L
Sbjct: 628 YKKRFHMFDEDEKGFITIVDVQRVLESINVQMDEDTLHEILCEVDLNKNGQVELHEFLQL 687
Query: 144 NSKIKSLELQGKRLREVYKAAKLN 167
S + + + G RL + K A+ N
Sbjct: 688 MSAVHTGRVSGSRLAILMKTAEEN 711
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,974,127
Number of Sequences: 539616
Number of extensions: 3773168
Number of successful extensions: 16078
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 328
Number of HSP's that attempted gapping in prelim test: 15823
Number of HSP's gapped (non-prelim): 568
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)