Query psy9276
Match_columns 583
No_of_seqs 105 out of 113
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 23:20:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9276.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9276hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hcz_A PHD finger protein 1; p 95.6 0.021 7.1E-07 45.8 5.8 38 267-307 4-42 (58)
2 2e5p_A Protein PHF1, PHD finge 94.1 0.086 2.9E-06 43.4 5.7 40 265-307 8-48 (68)
3 2m0o_A PHD finger protein 1; t 93.9 0.063 2.2E-06 45.2 4.7 40 265-307 25-65 (79)
4 3p8d_A Medulloblastoma antigen 93.7 0.13 4.4E-06 42.3 6.1 51 263-318 3-53 (67)
5 4a4f_A SurviVal of motor neuro 93.6 0.3 1E-05 38.9 8.1 53 265-321 7-61 (64)
6 2qqr_A JMJC domain-containing 93.6 0.048 1.6E-06 49.3 3.8 40 265-307 4-43 (118)
7 2l8d_A Lamin-B receptor; DNA b 93.6 0.24 8.3E-06 40.6 7.5 55 264-321 7-61 (66)
8 3qii_A PHD finger protein 20; 93.4 0.14 4.6E-06 44.0 6.0 52 262-318 17-68 (85)
9 2equ_A PHD finger protein 20-l 93.4 0.21 7.2E-06 41.5 7.0 54 264-322 7-60 (74)
10 1mhn_A SurviVal motor neuron p 93.2 0.35 1.2E-05 37.8 7.8 53 266-321 3-56 (59)
11 2dig_A Lamin-B receptor; tudor 93.1 0.22 7.4E-06 41.0 6.5 52 264-318 10-61 (68)
12 2e5q_A PHD finger protein 19; 92.5 0.14 4.6E-06 41.7 4.5 40 265-307 6-46 (63)
13 1g5v_A SurviVal motor neuron p 92.2 0.45 1.5E-05 40.7 7.7 54 265-321 9-63 (88)
14 2xk0_A Polycomb protein PCL; t 92.1 0.25 8.6E-06 40.8 5.7 39 265-307 14-52 (69)
15 2eqj_A Metal-response element- 92.1 0.27 9.4E-06 40.3 5.9 40 264-306 11-51 (66)
16 2xdp_A Lysine-specific demethy 91.8 0.047 1.6E-06 49.6 1.2 42 264-308 4-45 (123)
17 2ldm_A Uncharacterized protein 90.0 0.049 1.7E-06 46.2 0.0 54 263-321 3-56 (81)
18 3mea_A SAGA-associated factor 89.3 0.57 1.9E-05 45.0 6.3 41 266-307 116-157 (180)
19 2d9t_A Tudor domain-containing 86.8 2 6.7E-05 35.5 7.3 54 265-321 8-62 (78)
20 3pnw_C Tudor domain-containing 86.6 1.7 5.9E-05 35.9 6.8 54 265-321 16-70 (77)
21 3s6w_A Tudor domain-containing 86.4 1.9 6.5E-05 32.8 6.5 51 267-319 2-52 (54)
22 3mp6_A MBP, SGF29, maltose-bin 85.3 0.76 2.6E-05 48.8 5.1 39 267-307 458-496 (522)
23 3sd4_A PHD finger protein 20; 84.6 2.1 7.2E-05 34.5 6.3 43 262-306 8-50 (69)
24 2eqm_A PHD finger protein 20-l 83.5 4.4 0.00015 34.4 8.1 49 257-307 10-58 (88)
25 3dlm_A Histone-lysine N-methyl 83.3 2.1 7.3E-05 42.1 6.8 70 266-337 68-148 (213)
26 1ssf_A Transformation related 83.2 1.4 4.9E-05 41.5 5.3 48 268-318 10-58 (156)
27 2g3r_A Tumor suppressor P53-bi 82.8 2.1 7.3E-05 38.8 6.1 37 268-307 6-43 (123)
28 3oa6_A MALE-specific lethal 3 82.1 1.4 4.8E-05 39.3 4.6 59 263-321 16-84 (110)
29 3m9q_A Protein MALE-specific l 79.7 2.5 8.5E-05 37.2 5.3 57 263-321 16-84 (101)
30 3dlm_A Histone-lysine N-methyl 66.3 5.7 0.00019 39.2 4.7 39 267-307 9-49 (213)
31 1wgs_A MYST histone acetyltran 59.1 11 0.00039 34.1 5.1 55 262-318 8-67 (133)
32 3m9p_A MALE-specific lethal 3 57.0 10 0.00036 33.8 4.3 59 263-321 16-84 (110)
33 2f5k_A MORF-related gene 15 is 54.0 19 0.00064 31.6 5.4 53 264-319 20-75 (102)
34 2lcc_A AT-rich interactive dom 52.8 13 0.00045 30.7 4.0 55 265-319 4-62 (76)
35 2ro0_A Histone acetyltransfera 52.5 26 0.00089 30.1 5.9 51 265-318 22-75 (92)
36 3fdr_A Tudor and KH domain-con 51.0 1E+02 0.0035 25.3 10.1 74 234-321 6-79 (94)
37 2lcd_A AT-rich interactive dom 51.2 4.4 0.00015 36.5 0.0 43 262-307 52-94 (118)
38 1use_A VAsp, vasodilator-stimu 42.1 12 0.00041 28.6 1.9 33 9-58 13-45 (45)
39 1y71_A Kinase-associated prote 41.3 34 0.0012 31.4 5.1 33 267-304 8-40 (130)
40 2diq_A Tudor and KH domain-con 41.3 1E+02 0.0035 26.1 8.0 74 234-321 11-84 (110)
41 2cci_F Cell division control p 38.5 9.9 0.00034 26.6 0.9 27 45-71 3-30 (30)
42 2eko_A Histone acetyltransfera 37.8 39 0.0013 28.8 4.7 54 265-318 8-66 (87)
43 1wjq_A KIAA1798 protein; MBT d 37.5 54 0.0019 28.9 5.7 42 264-307 11-52 (107)
44 1nfn_A Apolipoprotein E3; lipi 37.4 1.1E+02 0.0038 28.9 8.4 80 369-450 40-122 (191)
45 2biv_A SCML2 protein, sex COMB 36.7 62 0.0021 32.1 6.6 41 265-307 170-210 (243)
46 2wac_A CG7008-PA; unknown func 34.6 1E+02 0.0035 28.4 7.6 51 267-321 52-102 (218)
47 2rnz_A Histone acetyltransfera 34.5 55 0.0019 28.3 5.2 51 265-318 24-77 (94)
48 2k3y_A Chromatin modification- 33.2 44 0.0015 30.7 4.6 29 263-294 6-34 (136)
49 2fhd_A RAD9 homolog, DNA repai 32.9 67 0.0023 30.1 5.7 40 270-309 9-52 (153)
50 2lrq_A Protein MRG15, NUA4 com 36.1 11 0.00038 31.9 0.0 54 264-320 10-66 (85)
51 1vbv_A Hypothetical protein B0 29.6 1.9E+02 0.0065 25.1 7.8 56 264-324 3-79 (105)
52 2d7n_A Filamin-C; beta-sandwic 29.5 80 0.0027 26.6 5.3 42 270-313 21-62 (93)
53 3plv_C 66 kDa U4/U6.U5 small n 26.3 38 0.0013 22.0 2.1 16 205-220 2-18 (21)
54 2xdp_A Lysine-specific demethy 25.0 1.3E+02 0.0045 27.2 6.1 67 250-321 40-114 (123)
55 3ntk_A Maternal protein tudor; 24.7 1.6E+02 0.0054 26.8 6.8 49 266-317 47-95 (169)
56 3h8z_A FragIle X mental retard 24.6 1.9E+02 0.0064 26.2 7.1 54 265-321 59-117 (128)
57 3e9g_A Chromatin modification- 24.6 99 0.0034 28.3 5.2 33 264-299 5-38 (130)
58 3cnr_A Type IV fimbriae assemb 24.0 86 0.003 27.7 4.7 48 264-314 39-89 (117)
59 2ee9_A Filamin-B; beta-sandwic 23.6 1.1E+02 0.0038 26.0 5.1 52 260-313 18-70 (95)
60 2dlg_A Filamin-B; beta-sandwic 23.3 84 0.0029 26.8 4.4 42 270-313 30-71 (102)
61 3mea_A SAGA-associated factor 23.2 1.4E+02 0.0048 28.5 6.3 66 257-322 35-103 (180)
62 2r58_A Polycomb protein SCM; M 23.1 1.6E+02 0.0056 29.5 7.1 43 263-307 140-182 (265)
63 3vkg_A Dynein heavy chain, cyt 21.9 5.2E+02 0.018 34.7 12.8 107 373-489 1894-2001(3245)
64 2hqx_A P100 CO-activator tudor 21.4 2.1E+02 0.0071 27.2 7.2 53 265-321 64-116 (246)
65 2jvv_A Transcription antitermi 21.3 1.1E+02 0.0039 28.1 5.2 42 264-307 125-166 (181)
No 1
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=95.60 E-value=0.021 Score=45.80 Aligned_cols=38 Identities=29% Similarity=0.531 Sum_probs=32.9
Q ss_pred ccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 267 LVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 267 L~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
|.+|+.|+|+.. || .|.|+|..|+....+|.|+|+-..
T Consensus 4 f~~GedVLarws---DG~fYlGtI~~V~~~~~~clV~F~D~s 42 (58)
T 4hcz_A 4 LWEGQDVLARWT---DGLLYLGTIKKVDSAREVCLVQFEDDS 42 (58)
T ss_dssp CCTTCEEEEECT---TSCEEEEEEEEEETTTTEEEEEETTSC
T ss_pred cccCCEEEEEec---CCCEEeEEEEEEecCCCEEEEEEcCCC
Confidence 679999999864 55 699999999999889999998654
No 2
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.10 E-value=0.086 Score=43.37 Aligned_cols=40 Identities=28% Similarity=0.495 Sum_probs=33.7
Q ss_pred ccccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 265 IQLVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
.-|.+|+-|+|+.. || +|.|+|..|+....+|.|+|.-..
T Consensus 8 ~~f~eGqdVLarWs---DGlfYlGtV~kV~~~~~~ClV~FeD~s 48 (68)
T 2e5p_A 8 PRLWEGQDVLARWT---DGLLYLGTIKKVDSAREVCLVQFEDDS 48 (68)
T ss_dssp CCCCTTCEEEEECT---TSSEEEEEEEEEETTTTEEEEEETTTE
T ss_pred cccccCCEEEEEec---CCcEEEeEEEEEecCCcEEEEEEccCC
Confidence 35789999999873 56 599999999998899999997543
No 3
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=93.91 E-value=0.063 Score=45.25 Aligned_cols=40 Identities=28% Similarity=0.495 Sum_probs=34.4
Q ss_pred ccccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 265 IQLVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
.-+.+|+-|+|+.. || +|.|+|..|+....+|.|+|+-..
T Consensus 25 ~~f~eGeDVLarws---DGlfYLGTI~kV~~~~e~ClV~F~D~S 65 (79)
T 2m0o_A 25 PRLWEGQDVLARWT---DGLLYLGTIKKVDSAREVCLVQFEDDS 65 (79)
T ss_dssp CCCCTTCEEEBCCT---TSCCCEEEEEEEETTTTEEEEEETTSC
T ss_pred ceeccCCEEEEEec---CCCEEeEEEEEeccCCCEEEEEEcCCC
Confidence 35899999999763 66 599999999999999999998654
No 4
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=93.67 E-value=0.13 Score=42.26 Aligned_cols=51 Identities=20% Similarity=0.326 Sum_probs=37.7
Q ss_pred CCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCccc
Q psy9276 263 IPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEV 318 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~ev 318 (583)
+|.-+.+|.+|.|+- .....|.|+|.+++.. .+|.|+|+- + -++.|.-.+|
T Consensus 3 ~~~~~~vGd~vmArW--~D~~yYpA~I~si~~~-~~Y~V~F~d-G-~~etvk~~~i 53 (67)
T 3p8d_A 3 MSSEFQINEQVLACW--SDCRFYPAKVTAVNKD-GTYTVKFYD-G-VVQTVKHIHV 53 (67)
T ss_dssp --CCCCTTCEEEEEC--TTSCEEEEEEEEECTT-SEEEEEETT-S-CEEEEEGGGE
T ss_pred cCcccccCCEEEEEc--CCCCEeeEEEEEECCC-CeEEEEEeC-C-ceEEEeHHHc
Confidence 356789999999996 3345799999999875 689999987 3 2455554444
No 5
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=93.61 E-value=0.3 Score=38.88 Aligned_cols=53 Identities=26% Similarity=0.348 Sum_probs=41.7
Q ss_pred ccccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCCCCc-eeeecCcccccC
Q psy9276 265 IQLVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQGLG-TQSIPDYEVLSN 321 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~~lg-v~~VpD~evms~ 321 (583)
..+.+|+.+.|+... || .|.++|.+++..+..|.|.|.- .| .+.|+=.++.++
T Consensus 7 ~~~~vGd~c~A~~s~--Dg~wYrA~I~~v~~~~~~~~V~fvd--YGn~e~V~~~~Lrpl 61 (64)
T 4a4f_A 7 HSWKVGDKCMAVWSE--DGQCYEAEIEEIDEENGTAAITFAG--YGNAEVTPLLNLKPV 61 (64)
T ss_dssp SCCCTTCEEEEECTT--TSSEEEEEEEEEETTTTEEEEEETT--TTEEEEEEGGGEECC
T ss_pred CCCCCCCEEEEEECC--CCCEEEEEEEEEcCCCCEEEEEEEe--cCCEEEEeHHHcEeC
Confidence 467899999999853 45 7999999999877899999984 44 677766666554
No 6
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=93.61 E-value=0.048 Score=49.26 Aligned_cols=40 Identities=20% Similarity=0.375 Sum_probs=34.2
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
.++.+|++|+|.|+ ....|.|+|.+.... ..|.|.||-..
T Consensus 4 ~~v~vGq~V~akh~--ngryy~~~V~~~~~~-~~y~V~F~DgS 43 (118)
T 2qqr_A 4 QSITAGQKVISKHK--NGRFYQCEVVRLTTE-TFYEVNFDDGS 43 (118)
T ss_dssp SCCCTTCEEEEECT--TSSEEEEEEEEEEEE-EEEEEEETTSC
T ss_pred ceeccCCEEEEECC--CCCEEeEEEEEEeeE-EEEEEEcCCCC
Confidence 57899999999987 367899999998765 79999999654
No 7
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=93.59 E-value=0.24 Score=40.56 Aligned_cols=55 Identities=15% Similarity=0.265 Sum_probs=43.6
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccC
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~ 321 (583)
|.-+.||..|.||-++. .+.|.+.|.++|..+..|.|.|-. | -++.++--||=|.
T Consensus 7 ~~~~~vgd~VmaRW~Gd-~~yYparI~Si~s~~~~Y~V~fKd-g-T~e~L~~kDIkp~ 61 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPGS-VLYYEVQVTSYDDASHLYTVKYKD-G-TELALKESDIRLQ 61 (66)
T ss_dssp SSSSCSSCEEEEECTTS-SCEEEEEEEEEETTTTEEEEEETT-S-CEEEEEGGGEECS
T ss_pred ceEeecCCEEEEEcCCC-ccceEEEEEEeccCCceEEEEecC-C-CEEeechhccccc
Confidence 56689999999999774 678999999999999999999987 3 2455555555433
No 8
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=93.39 E-value=0.14 Score=43.99 Aligned_cols=52 Identities=19% Similarity=0.270 Sum_probs=37.1
Q ss_pred CCCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCccc
Q psy9276 262 EIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEV 318 (583)
Q Consensus 262 ~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~ev 318 (583)
+=|..+.||.+|.|+- .....|.|+|.+|+.. .+|.|+|+- | -++.|.-.+|
T Consensus 17 ~~~~~f~vGd~VlArW--~D~~yYPAkI~sV~~~-~~YtV~F~D-G-~~etvk~~~I 68 (85)
T 3qii_A 17 GGSSEFQINEQVLACW--SDCRFYPAKVTAVNKD-GTYTVKFYD-G-VVQTVKHIHV 68 (85)
T ss_dssp ----CCCTTCEEEEEC--TTSCEEEEEEEEECTT-SEEEEEETT-S-CEEEEEGGGE
T ss_pred cCCcccccCCEEEEEe--CCCCEeeEEEEEECCC-CeEEEEEeC-C-CeEEecHHHc
Confidence 4467889999999997 3345799999999875 689999987 2 1455544444
No 9
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.36 E-value=0.21 Score=41.47 Aligned_cols=54 Identities=13% Similarity=0.238 Sum_probs=41.9
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccCC
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSND 322 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~~ 322 (583)
+..+.||+.|.|+.. ....|.|+|.+++.. .+|.|.|+-- -.+.|+-.+|-|..
T Consensus 7 ~~~~kvGd~clA~ws--Dg~~Y~A~I~~v~~~-~~~~V~f~Dy--n~e~v~~~~lrplp 60 (74)
T 2equ_A 7 GFDFKAGEEVLARWT--DCRYYPAKIEAINKE-GTFTVQFYDG--VIRCLKRMHIKAMP 60 (74)
T ss_dssp CCCCCTTCEEEEECS--SSSEEEEEEEEESTT-SSEEEEETTS--CEEEECGGGEECCC
T ss_pred CCCCCCCCEEEEECC--CCCEEEEEEEEECCC-CEEEEEEecC--CeEEecHHHCeeCC
Confidence 356789999999974 345799999999864 6899999854 57777777765553
No 10
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=93.22 E-value=0.35 Score=37.78 Aligned_cols=53 Identities=21% Similarity=0.323 Sum_probs=41.0
Q ss_pred cccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCc-eeeecCcccccC
Q psy9276 266 QLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLG-TQSIPDYEVLSN 321 (583)
Q Consensus 266 PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lg-v~~VpD~evms~ 321 (583)
.+.+|+.|.|+... ....|.++|.+++..+.+|.|.|. +.| .+.|+=.++.+.
T Consensus 3 ~~~~G~~c~A~~s~-Dg~wYrA~I~~i~~~~~~~~V~f~--DYGn~e~v~~~~Lr~~ 56 (59)
T 1mhn_A 3 QWKVGDKCSAIWSE-DGCIYPATIASIDFKRETCVVVYT--GYGNREEQNLSDLLSP 56 (59)
T ss_dssp CCCTTCEEEEECTT-TSCEEEEEEEEEETTTTEEEEEET--TTTEEEEEEGGGCBCT
T ss_pred cCCcCCEEEEEECC-CCCEEEEEEEEEcCCCCEEEEEEE--cCCCEEEEcHHHeeCC
Confidence 46899999998753 234799999999987789999996 455 677776666554
No 11
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=93.14 E-value=0.22 Score=40.99 Aligned_cols=52 Identities=12% Similarity=0.261 Sum_probs=41.8
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCccc
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEV 318 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~ev 318 (583)
|.-+.||..|.||-+.. ...|.+.|.+++..+.-|.|.|-. + -++.++--||
T Consensus 10 ~~~f~vgd~VmaRW~Gd-~~yYparItSits~~~~Y~VkfKd-g-T~e~L~~kDI 61 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGS-SLYYEVEILSHDSTSQLYTVKYKD-G-TELELKENDI 61 (68)
T ss_dssp CCSSCSSCEEEEECTTT-CCEEEEEEEEEETTTTEEEEECTT-S-CEEEEETTTE
T ss_pred ceEeecCCEEEEEccCC-ccceEEEEEEeccCCceEEEEecC-C-CEEEechhcc
Confidence 56789999999999864 678999999999999999999987 2 1455444443
No 12
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.51 E-value=0.14 Score=41.66 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=33.7
Q ss_pred ccccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 265 IQLVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
.-|.+|+-|+|+.. || +|.|+|..|+....+|.|+|.-..
T Consensus 6 ~~f~eGqdVLarWs---DGlfYlgtV~kV~~~~~~ClV~FeD~s 46 (63)
T 2e5q_A 6 SGLTEGQYVLCRWT---DGLYYLGKIKRVSSSKQSCLVTFEDNS 46 (63)
T ss_dssp CCCCTTCEEEEECT---TSCEEEEEECCCCSTTSEEEEEETTSC
T ss_pred cceecCCEEEEEec---CCCEEEEEEEEEecCCCEEEEEEccCc
Confidence 45789999999863 56 599999999998889999997554
No 13
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=92.22 E-value=0.45 Score=40.68 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=42.2
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCc-eeeecCcccccC
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLG-TQSIPDYEVLSN 321 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lg-v~~VpD~evms~ 321 (583)
.++.||+.|.|+... ....|.++|.+++..+.+|.|.|. +.| .+.|+=.++.|.
T Consensus 9 ~~~kvGd~C~A~ys~-Dg~wYrA~I~~i~~~~~~~~V~fi--DYGN~E~V~~~~Lrp~ 63 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSE-DGCIYPATIASIDFKRETCVVVYT--GYGNREEQNLSDLLSP 63 (88)
T ss_dssp CCCCSSCEEEEECTT-TCCEEEEEEEEEETTTTEEEEEET--TTCCEEEEEGGGCBCC
T ss_pred CCCCCCCEEEEEECC-CCCEEEEEEEEecCCCCEEEEEEe--cCCCEEEEcHHHcccC
Confidence 357899999999753 234699999999987789999995 555 677776666665
No 14
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=92.10 E-value=0.25 Score=40.83 Aligned_cols=39 Identities=21% Similarity=0.478 Sum_probs=30.4
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
--+.+|+-|+|+.. ...+|.|+| ||....+|.|+|+-..
T Consensus 14 ~~~~~geDVL~rw~--DG~fYLGtI--Vd~~~~~ClV~FeD~S 52 (69)
T 2xk0_A 14 VTYALQEDVFIKCN--DGRFYLGTI--IDQTSDQYLIRFDDQS 52 (69)
T ss_dssp CCCCTTCEEEEECT--TSCEEEEEE--EEECSSCEEEEETTCC
T ss_pred cccccCCeEEEEec--CCCEEEEEE--EecCCceEEEEecCCc
Confidence 34789999999853 234699999 5666789999998665
No 15
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=92.09 E-value=0.27 Score=40.33 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=33.9
Q ss_pred CccccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCC
Q psy9276 264 PIQLVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQ 306 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~ 306 (583)
+.-+.+|+-|.|+. .|| .|.|+|..|+....+|.|+|.-.
T Consensus 11 ~~~f~vGddVLA~w---tDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 11 ACKFEEGQDVLARW---SDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp CCCSCTTCEEEEEC---TTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred cccccCCCEEEEEE---ccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 34689999999986 366 59999999999889999999743
No 16
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=91.84 E-value=0.047 Score=49.65 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=35.5
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCC
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGL 308 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~l 308 (583)
+.++.+|++|+|.|+. ..+|.|+|.+... ...|.|.||-...
T Consensus 4 ~~~v~vGq~V~ak~~n--gryy~~~V~~~~~-~~~y~V~F~DgS~ 45 (123)
T 2xdp_A 4 EKVISVGQTVITKHRN--TRYYSCRVMAVTS-QTFYEVMFDDGSF 45 (123)
T ss_dssp CCCCCTTCCCCCCCCC--CCCCCCEEEEEEE-EEEEEEEETTSCE
T ss_pred ccccccCCEEEEECCC--CcEEeEEEEEEee-EEEEEEEcCCCCc
Confidence 5789999999999863 6789999999886 5799999996653
No 17
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=89.95 E-value=0.049 Score=46.25 Aligned_cols=54 Identities=19% Similarity=0.314 Sum_probs=41.1
Q ss_pred CCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccC
Q psy9276 263 IPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~ 321 (583)
+|..+.+|++|.|+.. ....|.|+|.+++.. .+|.|.|+- | -.+.|+=.+|-|.
T Consensus 3 ~~~~~kvGd~clAkws--Dg~wY~A~I~~v~~~-~~y~V~F~D-G-n~E~V~~s~LrPl 56 (81)
T 2ldm_A 3 MSSEFQINEQVLASWS--DSRFYPAKVTAVNKD-GTYTVKFYD-G-VVQTVKHIHVKAF 56 (81)
Confidence 4677899999999865 456899999999854 589999986 4 3566665555444
No 18
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=89.33 E-value=0.57 Score=45.03 Aligned_cols=41 Identities=12% Similarity=0.214 Sum_probs=34.4
Q ss_pred cccCCCEEEEEecCCCCcceeeEEEEEeCC-CCeeEEEecCCC
Q psy9276 266 QLVVGTKVTARVRSPQDGLFTGVVDAYDTS-NNTYRITFDRQG 307 (583)
Q Consensus 266 PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~-~~~YrV~Fdr~~ 307 (583)
-+..|++|+|+-|.| .-+|.++|.+.... ...|+|.||-.+
T Consensus 116 ~f~~G~~VLAlYP~T-T~FY~A~V~~~p~~~~~~y~L~FEdde 157 (180)
T 3mea_A 116 LFQKEQLVLALYPQT-TCFYRALIHAPPQRPQDDYSVLFEDTS 157 (180)
T ss_dssp SCCTTCEEEEECTTS-SEEEEEEEEECCSSTTCCEEEEEBCTT
T ss_pred cCCCCCEEEEeCCCC-ceeeEEEEecCCCCCCCcEEEEEcCCC
Confidence 489999999999996 58999999987442 268999999765
No 19
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=86.80 E-value=2 Score=35.52 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=41.2
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCc-eeeecCcccccC
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLG-TQSIPDYEVLSN 321 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lg-v~~VpD~evms~ 321 (583)
....+|+.|.|+... ....|.++|++++..+.+|.|.|. +.| ++.|+=.++.++
T Consensus 8 ~~~~~G~~c~A~~s~-Dg~wYRA~I~~i~~~~~~~~V~fi--DYGN~e~V~~~~Lr~l 62 (78)
T 2d9t_A 8 KVWKPGDECFALYWE-DNKFYRAEVEALHSSGMTAVVKFT--DYGNYEEVLLSNIKPV 62 (78)
T ss_dssp CCCCTTCEEEEECTT-TCCEEEEEEEEECSSSSEEEEEET--TTTEEEEEEGGGEEEC
T ss_pred cCCCcCCEEEEEECC-CCCEEEEEEEEEeCCCCEEEEEEE--cCCCeEEEcHHHeEeC
Confidence 356899999998753 245799999999876789999995 555 677766666555
No 20
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=86.64 E-value=1.7 Score=35.91 Aligned_cols=54 Identities=17% Similarity=0.114 Sum_probs=41.2
Q ss_pred ccccCCCEEEEEecCCCCc-ceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccC
Q psy9276 265 IQLVVGTKVTARVRSPQDG-LFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~g-L~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~ 321 (583)
..+.+|+.|.|+... || .|.|+|.+++..+.+|.|.|.-=|. ++.|+=.++.++
T Consensus 16 ~~~kvGd~C~A~ys~--Dg~wYRA~I~~i~~~~~~~~V~fvDYGN-~e~V~~~~Lr~l 70 (77)
T 3pnw_C 16 KMWKPGDECFALYWE--DNKFYRAEVEALHSSGMTAVVKFIDYGN-YEEVLLSNIKPI 70 (77)
T ss_dssp TTCCTTCEEEEEETT--TTEEEEEEEEEECTTSSEEEEEETTTCC-EEEEEGGGEECC
T ss_pred CCCCcCCEEEEEECC--CCCEEEEEEEEEeCCCCEEEEEEEcCCC-eEEEeHHHeEEC
Confidence 346899999999843 55 6999999999877899999985442 677766666554
No 21
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=86.43 E-value=1.9 Score=32.83 Aligned_cols=51 Identities=16% Similarity=0.158 Sum_probs=36.0
Q ss_pred ccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccc
Q psy9276 267 LVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVL 319 (583)
Q Consensus 267 L~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evm 319 (583)
..+|+.+.|+... ...-|.|+|++++..+.+|.|.|.-=| ..+.||=.++-
T Consensus 2 wk~G~~c~A~~s~-Dg~wYrA~I~~i~~~~~~~~V~fvDYG-n~e~v~~~~lr 52 (54)
T 3s6w_A 2 WKPGDECFALYWE-DNKFYRAEVEALHSSGMTAVVKFIDYG-NYEEVLLSNIK 52 (54)
T ss_dssp CCTTCEEEEEETT-TTEEEEEEEEEC--CCSEEEEEETTTC-CEEEEEGGGEE
T ss_pred CCCCCEEEEEECC-CCCEEEEEEEEEeCCCCEEEEEEEccC-CeEEEeHHHEE
Confidence 4799999999853 234799999999887789999997433 25666544443
No 22
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=85.28 E-value=0.76 Score=48.82 Aligned_cols=39 Identities=28% Similarity=0.411 Sum_probs=33.4
Q ss_pred ccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 267 LVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 267 L~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
+++|++|+|+-|.+ -.+|.++|.+.- ....|+|+|+-.+
T Consensus 458 ~~~~~~v~a~~p~t-t~fy~a~v~~~~-~~~~~~~~f~~~~ 496 (522)
T 3mp6_A 458 YPPGTKVLARYPET-TTFYPAIVIGTK-RDGTCRLRFDGEE 496 (522)
T ss_dssp CCTTCEEEEECTTC-SEEEEEEEEEEC-TTSCEEEEETTC-
T ss_pred CCCCCEEEEECCCC-cceEeEEEecCC-CCCeEEEEecCCC
Confidence 99999999999996 589999999964 4568999999654
No 23
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=84.59 E-value=2.1 Score=34.48 Aligned_cols=43 Identities=23% Similarity=0.345 Sum_probs=34.8
Q ss_pred CCCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCC
Q psy9276 262 EIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQ 306 (583)
Q Consensus 262 ~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~ 306 (583)
.-+..|.||.||-|+-+. .-.|.++|..||..+..++|.||.-
T Consensus 8 ~~~~~F~vGmkLEa~d~~--~p~~~AtV~~v~~~~~~~~VhfdGw 50 (69)
T 3sd4_A 8 RRGISFEVGAQLEARDRL--KNWYPAHIEDIDYEEGKVLIHFKRW 50 (69)
T ss_dssp CTTCCCSTTCEEEEECTT--SCEEEEEEEEEETTTTEEEEEETTS
T ss_pred CCCCCcCCCCEEEEEECC--CCccccEEEEEeccCCEEEEEeCCC
Confidence 345679999999998754 2249999999988889999999843
No 24
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=83.45 E-value=4.4 Score=34.44 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=39.6
Q ss_pred CCCCCCCCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 257 KDIPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 257 ~~LP~~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
+.-|..-+..|.||.||-|+.+. .-.+...|..++.....|+|.||.=.
T Consensus 10 ~~~~~~~~~~F~vGmkLEA~D~~--~~~~~a~i~~v~~~~~~v~VHfdGW~ 58 (88)
T 2eqm_A 10 KKPPNRPGITFEIGARLEALDYL--QKWYPSRIEKIDYEEGKMLVHFERWS 58 (88)
T ss_dssp TSCCSCSSCCCCSSCEEEEECTT--SCEEEEEEEEEETTTTEEEEEESSST
T ss_pred cCCCCCCcCcCCCCCEEEEEcCC--CCeeEEEEEEEeccCCEEEEEECCCC
Confidence 45566667889999999998753 23589999999988899999999654
No 25
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=83.25 E-value=2.1 Score=42.13 Aligned_cols=70 Identities=23% Similarity=0.364 Sum_probs=46.6
Q ss_pred cccCCCEEEEEecC-CCCcceeeEEEEEeCC--CCeeEEEecCCCCceeeecCcccccC-----CCcccc---hhhhhhh
Q psy9276 266 QLVVGTKVTARVRS-PQDGLFTGVVDAYDTS--NNTYRITFDRQGLGTQSIPDYEVLSN-----DTPETL---NRQSFLQ 334 (583)
Q Consensus 266 PL~VG~kV~Arl~~-~~~gL~~G~Vlavd~~--~~~YrV~Fdr~~lgv~~VpD~evms~-----~~~e~l---~lssi~~ 334 (583)
-|.||+||+|.... ....+|.|.|...+.. ...|.|-||-.. ...|+--+|+.. +.=+-+ +.+.|++
T Consensus 68 ~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDDG~--~~Yv~~~~V~~Vc~~s~~vW~di~~~~~r~FIk 145 (213)
T 3dlm_A 68 KLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGY--ASYVTQSELYPICRPLKKTWEDIEDISCRDFIE 145 (213)
T ss_dssp GCCTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETTSC--EEEECGGGEEEBSSCCSSGGGGCSCHHHHHHHH
T ss_pred EEeEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeCCC--cceecCceEEEEEEcccchhhhcCcchhHHHHH
Confidence 47899999999854 2346999999977653 457899999766 455544444322 111223 3578888
Q ss_pred hhc
Q psy9276 335 MFF 337 (583)
Q Consensus 335 ~~~ 337 (583)
+|+
T Consensus 146 ~YL 148 (213)
T 3dlm_A 146 EYV 148 (213)
T ss_dssp HHH
T ss_pred HHH
Confidence 885
No 26
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=83.16 E-value=1.4 Score=41.45 Aligned_cols=48 Identities=23% Similarity=0.333 Sum_probs=35.8
Q ss_pred cCCCEEEEEecCCCCcce-eeEEEEEeCCCCeeEEEecCCCCceeeecCccc
Q psy9276 268 VVGTKVTARVRSPQDGLF-TGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEV 318 (583)
Q Consensus 268 ~VG~kV~Arl~~~~~gL~-~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~ev 318 (583)
.+|.+|+|+-. .++-| .|+|..+ ..++.|.|.||-..--+...+|+-|
T Consensus 10 ~iG~rVfArWs--d~~yyYpG~V~~~-~~~~~Y~V~FdDG~~k~v~~~divv 58 (156)
T 1ssf_A 10 FVGLRVVAKWS--SNGYFYSGKITRD-VGAGKYKLLFDDGYECDVLGKDILL 58 (156)
T ss_dssp STTCEEEECSS--CSSEEEEEEEEEC-CTTTEEEEECTTSCEEEEETTTEEE
T ss_pred hhccEEEEEcC--CCCcccccEEEEe-ccCCEEEEEEcCCCeeEeeccceEE
Confidence 48999999865 45655 9999996 6788999999987643344355543
No 27
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=82.77 E-value=2.1 Score=38.85 Aligned_cols=37 Identities=24% Similarity=0.499 Sum_probs=31.0
Q ss_pred cCCCEEEEEecCCCC-cceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 268 VVGTKVTARVRSPQD-GLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 268 ~VG~kV~Arl~~~~~-gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
.+|.+|+|+.. .+ ..|.|+|.. +..++.|+|.||-..
T Consensus 6 ~~G~rV~AkWs--dn~~yYpG~V~~-~~~~~ky~V~FdDg~ 43 (123)
T 2g3r_A 6 FVGLRVVAKWS--SNGYFYSGKITR-DVGAGKYKLLFDDGY 43 (123)
T ss_dssp CTTCEEEEECT--TTCCEEEEEEEE-EEETTEEEEEETTSC
T ss_pred ccceEEEEEec--cCCcCcccEEEE-eccCCeEEEEEcCCC
Confidence 38999999975 46 489999998 477889999999765
No 28
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=82.07 E-value=1.4 Score=39.32 Aligned_cols=59 Identities=17% Similarity=0.239 Sum_probs=42.3
Q ss_pred CCccccCCCEEEEEecCCCC--cceeeEEEEEeCCCC-------eeEEEecCCCCc-eeeecCcccccC
Q psy9276 263 IPIQLVVGTKVTARVRSPQD--GLFTGVVDAYDTSNN-------TYRITFDRQGLG-TQSIPDYEVLSN 321 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~~~--gL~~G~Vlavd~~~~-------~YrV~Fdr~~lg-v~~VpD~evms~ 321 (583)
....+.+|.+|+++|+.+.. -||.+.|+.+....+ .|.|-|.-=.-. -+.||...|+..
T Consensus 16 ~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~ 84 (110)
T 3oa6_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRD 84 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEEC
T ss_pred CCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChhhhhcC
Confidence 34679999999999977543 489999998864322 499999633322 478888888765
No 29
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=79.67 E-value=2.5 Score=37.17 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=41.0
Q ss_pred CCccccCCCEEEEEecCCC--CcceeeEEEEEeCCC-------CeeEEEecCCCCce---eeecCcccccC
Q psy9276 263 IPIQLVVGTKVTARVRSPQ--DGLFTGVVDAYDTSN-------NTYRITFDRQGLGT---QSIPDYEVLSN 321 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~~--~gL~~G~Vlavd~~~-------~~YrV~Fdr~~lgv---~~VpD~evms~ 321 (583)
+..++.+|.+|.++++.+. .-+|.+.|+.+.... ..|.|-|. |-.. +.||-..|+..
T Consensus 16 ~~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~--GWn~rwDEWV~edRilk~ 84 (101)
T 3m9q_A 16 ETPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQ--GWRPSYDRAVRATVLLKD 84 (101)
T ss_dssp CCCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEET--TSCGGGCEEECGGGEEEC
T ss_pred CCCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeC--CCCcCceeecCHHHcccC
Confidence 4567999999999996322 248999999987632 37999995 3322 77777776654
No 30
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=66.26 E-value=5.7 Score=39.16 Aligned_cols=39 Identities=23% Similarity=0.508 Sum_probs=31.4
Q ss_pred ccCCCEEEEEecCCCCcceeeEEEEEeC--CCCeeEEEecCCC
Q psy9276 267 LVVGTKVTARVRSPQDGLFTGVVDAYDT--SNNTYRITFDRQG 307 (583)
Q Consensus 267 L~VG~kV~Arl~~~~~gL~~G~Vlavd~--~~~~YrV~Fdr~~ 307 (583)
|.||++|.|+- +.+.-+.|+|+++-+ ....|.|+|+..+
T Consensus 9 l~Vg~~vlg~k--~~~~W~rg~v~~I~~~~~g~~YkVkF~~~g 49 (213)
T 3dlm_A 9 LIVSMRILGKK--RTKTWHKGTLIAIQTVGPGKKYKVKFDNKG 49 (213)
T ss_dssp EETTCEEEEEC--TTSBEEEEEEEEEEEETTEEEEEEEESSSC
T ss_pred EEEccEEEEEe--cCCcEEEEEEEEEEECCCCeEEEEEEcCCC
Confidence 57999999985 447789999998666 3467999999655
No 31
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=59.10 E-value=11 Score=34.13 Aligned_cols=55 Identities=7% Similarity=0.096 Sum_probs=39.1
Q ss_pred CCCccccCCCEEEEEecCCCCcceeeEEEEEeC----CCCeeEEEecCCCCc-eeeecCccc
Q psy9276 262 EIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDT----SNNTYRITFDRQGLG-TQSIPDYEV 318 (583)
Q Consensus 262 ~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~----~~~~YrV~Fdr~~lg-v~~VpD~ev 318 (583)
....+|.+|++|.+++. ...+|.+.|+.+.. ....|.|-|.-=.-- -+.||--.|
T Consensus 8 ~~~~~~~vGe~v~~~~~--d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri 67 (133)
T 1wgs_A 8 EPEVTVEIGETYLCRRP--DSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRL 67 (133)
T ss_dssp CCCCCCCTTSEEEEEET--TTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTS
T ss_pred CcccccCCCCEEEEEeC--CCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhc
Confidence 34567999999999985 24789999998874 345799998743221 366665555
No 32
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=56.98 E-value=10 Score=33.78 Aligned_cols=59 Identities=17% Similarity=0.216 Sum_probs=40.0
Q ss_pred CCccccCCCEEEEEecCC--CCcceeeEEEEEeCCC-------CeeEEEecCCCCc-eeeecCcccccC
Q psy9276 263 IPIQLVVGTKVTARVRSP--QDGLFTGVVDAYDTSN-------NTYRITFDRQGLG-TQSIPDYEVLSN 321 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~--~~gL~~G~Vlavd~~~-------~~YrV~Fdr~~lg-v~~VpD~evms~ 321 (583)
...+|.+|.+|.+++..| ..-+|.+.|+.++..+ ..|.|-|.-=.-. -+.||...|+..
T Consensus 16 ~~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e~rllk~ 84 (110)
T 3m9p_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRD 84 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEEC
T ss_pred CCCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCHhhhhcC
Confidence 346789999999997531 1358999999987632 4799999521111 277777776655
No 33
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=53.97 E-value=19 Score=31.61 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=36.6
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCC--CeeEEEecCCCCc-eeeecCcccc
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSN--NTYRITFDRQGLG-TQSIPDYEVL 319 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~--~~YrV~Fdr~~lg-v~~VpD~evm 319 (583)
..++.+|++|.+++ ...+|.+.|+.++..+ ..|.|-|.-=.-. -+.||-..|+
T Consensus 20 ~~~f~vGekVl~~~---~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~ 75 (102)
T 2f5k_A 20 KPKFQEGERVLCFH---GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVL 75 (102)
T ss_dssp SCSCCTTCEEEEES---SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEE
T ss_pred CcccCCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcc
Confidence 35799999999997 2579999999988533 3688888732211 2555544444
No 34
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=52.82 E-value=13 Score=30.71 Aligned_cols=55 Identities=9% Similarity=0.233 Sum_probs=37.6
Q ss_pred ccccCCCEEEEEecCC-CCcceeeEEEEEeCCCC--eeEEEecCCCCc-eeeecCcccc
Q psy9276 265 IQLVVGTKVTARVRSP-QDGLFTGVVDAYDTSNN--TYRITFDRQGLG-TQSIPDYEVL 319 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~-~~gL~~G~Vlavd~~~~--~YrV~Fdr~~lg-v~~VpD~evm 319 (583)
.++.+|++|.++.+.. ...+|.+.|+.++..+. .|.|-|..=.-- -+.||-..|+
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~ 62 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRII 62 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEE
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhcc
Confidence 3689999999998631 13689999999886433 589998743321 3566555553
No 35
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=52.50 E-value=26 Score=30.07 Aligned_cols=51 Identities=6% Similarity=0.066 Sum_probs=35.7
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCC--CeeEEEecCCCCc-eeeecCccc
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSN--NTYRITFDRQGLG-TQSIPDYEV 318 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~--~~YrV~Fdr~~lg-v~~VpD~ev 318 (583)
..|.+|++|.+++ ...+|.+.|+.+...+ ..|-|-|..=+-- -+.|+-.+|
T Consensus 22 ~~~~vG~kv~v~~---~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl 75 (92)
T 2ro0_A 22 DDIIIKCQCWVQK---NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRI 75 (92)
T ss_dssp TSCCTTCEEEEEE---TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGE
T ss_pred ccccCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHc
Confidence 5689999999997 3578999999988643 4688888643322 245544444
No 36
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=51.01 E-value=1e+02 Score=25.34 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCccCCCCCCCCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeee
Q psy9276 234 NLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSI 313 (583)
Q Consensus 234 kLe~~R~~IR~lqq~~~~d~~~~~~LP~~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~V 313 (583)
+||.-=+.++++|.... | -+..+.+|+-|.|.... .+..|.|.|++++. +..+.|.|--=| .++.|
T Consensus 6 ~Le~Lm~~m~~~y~~~~---------~--~~~~~~~G~~c~a~~~~-d~~wyRA~I~~~~~-~~~~~V~fvDyG-n~e~v 71 (94)
T 3fdr_A 6 QLDKLVNEMTQHYENSV---------P--EDLTVHVGDIVAAPLPT-NGSWYRARVLGTLE-NGNLDLYFVDFG-DNGDC 71 (94)
T ss_dssp HHHHHHHHHHHHHTTCC---------C--CCCCCCTTCEEEEEETT-TTEEEEEEEEEECT-TSCEEEEETTTC-CEEEE
T ss_pred HHHHHHHHHHHHHhcCC---------C--CCCCCCCCCEEEEEECC-CCeEEEEEEEEECC-CCeEEEEEEcCC-CeEEE
Confidence 35555566677665321 1 12456899999998754 35689999999974 468999997444 26666
Q ss_pred cCcccccC
Q psy9276 314 PDYEVLSN 321 (583)
Q Consensus 314 pD~evms~ 321 (583)
+=.++.++
T Consensus 72 ~~~~lr~l 79 (94)
T 3fdr_A 72 PLKDLRAL 79 (94)
T ss_dssp CGGGCEEC
T ss_pred EHHHhhhc
Confidence 65555443
No 37
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=51.25 E-value=4.4 Score=36.53 Aligned_cols=43 Identities=19% Similarity=0.345 Sum_probs=34.6
Q ss_pred CCCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 262 EIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 262 ~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
.|--+|.+|+.|.++++. +....|+|..+- ....|.|-||-.+
T Consensus 52 ~ikG~l~vG~~ve~~~~~--~~~~~~~I~~i~-D~S~YtVVFdDGD 94 (118)
T 2lcd_A 52 QVKGPLRVGAIVETRTSD--GSFQEAIISKLT-DASWYTVVFDDGD 94 (118)
Confidence 345689999999999863 578899998764 4578999999766
No 38
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=42.14 E-value=12 Score=28.63 Aligned_cols=33 Identities=48% Similarity=0.698 Sum_probs=22.3
Q ss_pred hHHHHHhhhhcccccCCcchhhhHHHHhhccCCCCCCChhhhhhhcCCCC
Q psy9276 9 HQEIIEEGLREEEVGLEPDLSKVKEEVIIKMEPEDDVDPEAESLNRRGMP 58 (583)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~rgmp 58 (583)
-|||++|--+| ++|+|+|+|- .-.+-||+||-|
T Consensus 13 KqEIL~E~RkE--------lqK~K~EIIe---------Ai~~El~~~~~~ 45 (45)
T 1use_A 13 KQELLEEVKKE--------LQKVKEEIIE---------AFVQELRKRGSP 45 (45)
T ss_dssp HHHHHHHHHHH--------HHHHHHHHHH---------HHHHHHHHC---
T ss_pred HHHHHHHHHHH--------HHHHHHHHHH---------HHHHHHHhcCCC
Confidence 37788775554 8999999983 346678888865
No 39
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=41.35 E-value=34 Score=31.35 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=28.0
Q ss_pred ccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEec
Q psy9276 267 LVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFD 304 (583)
Q Consensus 267 L~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fd 304 (583)
+.+|+.|++.+. .|.|.|.|....+ +.|.|+-.
T Consensus 8 ~~~g~~v~~~yK---TG~YigeI~e~~~--~~~lVkVl 40 (130)
T 1y71_A 8 FEIGEIVTGIYK---TGKYIGEVTNSRP--GSYVVKVL 40 (130)
T ss_dssp CCTTCEEEEEET---TEEEEEEEEEEET--TEEEEEEE
T ss_pred CCccceeEEEEe---cceeEEEEEeecC--CeEEEEEE
Confidence 589999999974 4999999998777 68999864
No 40
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=41.28 E-value=1e+02 Score=26.13 Aligned_cols=74 Identities=15% Similarity=0.175 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCccCCCCCCCCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeee
Q psy9276 234 NLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSI 313 (583)
Q Consensus 234 kLe~~R~~IR~lqq~~~~d~~~~~~LP~~IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~V 313 (583)
+|+.--+.+++.+.... | .+..+.+|+-|.|.... .+..|.+.|++++.. ..|.|.|--=| .++.|
T Consensus 11 ~l~~L~~~m~~~y~~~~---------~--~~~~~~~G~~c~a~~~~-d~~wyRA~V~~~~~~-~~~~V~fvDyG-n~e~v 76 (110)
T 2diq_A 11 QLDKLVNEMTQHYENSV---------P--EDLTVHVGDIVAAPLPT-NGSWYRARVLGTLEN-GNLDLYFVDFG-DNGDC 76 (110)
T ss_dssp HHHHHHHHHHHHHTTSC---------C--CCCCCCTTCEEEECCTT-TCSCEEEEECCCCSS-SCEEEEETTTC-CEEEE
T ss_pred HHHHHHHHHHHHHccCC---------C--CCCCCCCCCEEEEEECC-CCeEEEEEEEEECCC-CeEEEEEEeCC-CeEEE
Confidence 35555556666554321 1 23456899999997643 356899999999763 68999997444 26666
Q ss_pred cCcccccC
Q psy9276 314 PDYEVLSN 321 (583)
Q Consensus 314 pD~evms~ 321 (583)
+=.++.++
T Consensus 77 ~~~~Lr~l 84 (110)
T 2diq_A 77 PLKDLRAL 84 (110)
T ss_dssp CGGGCEEC
T ss_pred ehHHhhcC
Confidence 65555444
No 41
>2cci_F Cell division control protein 6 homolog; complex (transferase/cell division), protein kinases, cell C recruitment, substrate recognition; HET: TPO ATP; 2.7A {Homo sapiens}
Probab=38.51 E-value=9.9 Score=26.65 Aligned_cols=27 Identities=30% Similarity=0.634 Sum_probs=22.4
Q ss_pred CChhhhhhhcCCCC-ccccccccccccc
Q psy9276 45 VDPEAESLNRRGMP-RRTIKKNRYIFDD 71 (583)
Q Consensus 45 ~~~~~~~ln~rgmp-arirkknrl~~dd 71 (583)
-|||+|.-..-|-| ...+|.-||.|||
T Consensus 3 cSPpKq~kkengpp~~~t~kgrrLvFd~ 30 (30)
T 2cci_F 3 ASPRKQGKKENGPPHSHTLKGRRLVFDN 30 (30)
T ss_pred CCccccccccCCCCcccccccceeeccC
Confidence 36788888888888 6889999999996
No 42
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.82 E-value=39 Score=28.76 Aligned_cols=54 Identities=6% Similarity=0.075 Sum_probs=37.0
Q ss_pred ccccCCCEEEEEecC--CCCcceeeEEEEEeCC--CCeeEEEecCCCCc-eeeecCccc
Q psy9276 265 IQLVVGTKVTARVRS--PQDGLFTGVVDAYDTS--NNTYRITFDRQGLG-TQSIPDYEV 318 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~--~~~gL~~G~Vlavd~~--~~~YrV~Fdr~~lg-v~~VpD~ev 318 (583)
..+.+|.+|.++++. ....+|.+.|+.+... ...|-|.|..=+-- -+.|+-.+|
T Consensus 8 ~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl 66 (87)
T 2eko_A 8 GEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERL 66 (87)
T ss_dssp CSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTB
T ss_pred ccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHc
Confidence 567899999999842 2346899999998864 34788888754422 255544333
No 43
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=37.48 E-value=54 Score=28.89 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=35.0
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
+..|.+|.|+-|+-+.....++..+|..|+ ....+|.||--+
T Consensus 11 ~~~F~~GMKLEAvD~~~p~~icvATV~~v~--g~rl~v~fDGw~ 52 (107)
T 1wjq_A 11 PHGFQKKMKLEVVDKRNPMFIRVATVADTD--DHRVKVHFDGWN 52 (107)
T ss_dssp SSSCCSSCEEEEECTTCTTCEEEEEEEEEC--SSCEEEECSSSC
T ss_pred cccCCCCCEEEEEcCCCCCcEEeEEEEEec--CCEEEEEeCCCC
Confidence 577999999999987754678999999995 478999998544
No 44
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=37.42 E-value=1.1e+02 Score=28.94 Aligned_cols=80 Identities=8% Similarity=0.119 Sum_probs=40.1
Q ss_pred cCCccHHHHHHH--HHHHHHHHHHHHHHHHHHhhcHHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHH
Q psy9276 369 LGEYPVELLEQV--VRFKKLLKFKKTEVYQIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLE-KINKDVNTVLASLSV 445 (583)
Q Consensus 369 iG~~p~~lL~~l--v~LsKlL~~Ke~lV~~L~~MN~EAE~~~s~g~~~~e~FQrrYA~vvi~Le-~vN~~L~~~L~~Lq~ 445 (583)
+.++-..+++.| ..+.+-+.- .+-..+..+|..++.....-.|+.++|+.+...-+-.|+ ++++++...=..|..
T Consensus 40 l~~~a~~~~eqL~~s~l~~el~~--l~~e~~~~l~~~~~~l~~qL~P~~~e~~~~l~~~~e~lr~~l~kdlEelr~kL~P 117 (191)
T 1nfn_A 40 VQTLSEQVQEELLSSQVTQELRA--LMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQ 117 (191)
T ss_dssp HHHCCHHHHHHHTSSHHHHHHHH--HHHHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcChHHHHHHH--HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 345666677777 666544433 344455666666777776667888888887666655554 245555555555555
Q ss_pred Hhhhh
Q psy9276 446 NLKKL 450 (583)
Q Consensus 446 ~~~~l 450 (583)
|..++
T Consensus 118 ~~eEL 122 (191)
T 1nfn_A 118 YRGEV 122 (191)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 45
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=36.68 E-value=62 Score=32.07 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=34.5
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
..|.+|.|+-|.-+.-..-++.++|..|. +..++|.||.-+
T Consensus 170 ~~F~~GmKLEavD~~~p~~icvATV~~v~--g~rl~v~fDgw~ 210 (243)
T 2biv_A 170 NNFKVGMKLEAIDKKNPYLICPATIGDVK--GDEVHITFDGWS 210 (243)
T ss_dssp CCCCTTCEEEEECTTSTTCEEEEEEEEEE--TTEEEEEETTSC
T ss_pred ccccCCCEEEEEccCCCCeEEEEEEEEec--CCEEEEEECCCC
Confidence 58999999999987744679999999997 478999999543
No 46
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=34.62 E-value=1e+02 Score=28.42 Aligned_cols=51 Identities=12% Similarity=0.211 Sum_probs=37.5
Q ss_pred ccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccC
Q psy9276 267 LVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321 (583)
Q Consensus 267 L~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~ 321 (583)
..+|+.|.|.... .+..|.|.|++++. .+|.|.|---| .++.|+-.++.++
T Consensus 52 ~~~g~~c~a~~~~-d~~wyRa~V~~v~~--~~~~V~~vDyG-~~~~v~~~~l~~l 102 (218)
T 2wac_A 52 PKRGDLVAAQFTL-DNQWYRAKVERVQG--SNATVLYIDYG-NKETLPTNRLAAL 102 (218)
T ss_dssp CCTTCEEEEECTT-TCCEEEEEEEEEET--TEEEEEETTTC-CEEEEEGGGEEEC
T ss_pred CCcCCEEEEEECC-CCeEEEEEEEEecC--CeEEEEEEecC-CeEEEchHHcccC
Confidence 5799999998753 25689999999976 79999996444 2566665555443
No 47
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=34.52 E-value=55 Score=28.29 Aligned_cols=51 Identities=6% Similarity=0.066 Sum_probs=35.8
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCC--CeeEEEecCCCCc-eeeecCccc
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSN--NTYRITFDRQGLG-TQSIPDYEV 318 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~--~~YrV~Fdr~~lg-v~~VpD~ev 318 (583)
.+|.+|++|.+++ ...+|.+.|+.+...+ ..|-|-|..=+-- -+.|+-.+|
T Consensus 24 ~~~~vG~kv~v~~---~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI 77 (94)
T 2rnz_A 24 DDIIIKCQCWVQK---NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRI 77 (94)
T ss_dssp GGCCTTEEEEEEC---SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTB
T ss_pred ccccCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHc
Confidence 5689999999996 3578999999888643 4677777643322 355555544
No 48
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=33.25 E-value=44 Score=30.74 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=23.9
Q ss_pred CCccccCCCEEEEEecCCCCcceeeEEEEEeC
Q psy9276 263 IPIQLVVGTKVTARVRSPQDGLFTGVVDAYDT 294 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~ 294 (583)
+-.+|.+|.+|+|+| .| .+|.+.|+.+..
T Consensus 6 ~~~~f~~gekvl~~h-g~--llYeAKVl~v~~ 34 (136)
T 2k3y_A 6 LEQEFALGGRVLAFH-GP--LMYEAKILKIWD 34 (136)
T ss_dssp GGGSCCTTSEEEEEC-SS--CEEEEEEEEEEE
T ss_pred cccccCCCCEEEEEE-CC--eeEEEEEEEEEe
Confidence 346899999999999 33 599999998764
No 49
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=32.92 E-value=67 Score=30.15 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=33.2
Q ss_pred CCEEEEEecCCCCcceeeEEEEEe----CCCCeeEEEecCCCCc
Q psy9276 270 GTKVTARVRSPQDGLFTGVVDAYD----TSNNTYRITFDRQGLG 309 (583)
Q Consensus 270 G~kV~Arl~~~~~gL~~G~Vlavd----~~~~~YrV~Fdr~~lg 309 (583)
-.+|+|..++...+-|.++.++.. ..+..|.|+||-.+.+
T Consensus 9 ~NrVfAff~G~p~~YYPATcvg~~~~~~~~~~~y~VrFdDs~~~ 52 (153)
T 2fhd_A 9 KNRVLAFFKGYPSFYYPATLVAPVHSAVTSSIMYKVQFDDATMS 52 (153)
T ss_dssp GGEEEEECCSSSCCEEEEEEEEEECCSSCCBCEEEEEETTSCEE
T ss_pred cceEEEEcCCCcccccceEEEccCCCcccCCeEEEEEEcCCCCC
Confidence 479999998866789999999877 4678999999987643
No 50
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=36.13 E-value=11 Score=31.87 Aligned_cols=54 Identities=17% Similarity=0.183 Sum_probs=36.4
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCC--CCeeEEEecCCCCc-eeeecCccccc
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTS--NNTYRITFDRQGLG-TQSIPDYEVLS 320 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~--~~~YrV~Fdr~~lg-v~~VpD~evms 320 (583)
...+.+|.+|.+++. +.+|.+.|+.++.. ...|.|.|.-=.-- -+.||...|+.
T Consensus 10 ~~~~~~Gekv~~~~~---~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k 66 (85)
T 2lrq_A 10 NTLFVDGERVLCFHG---PLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLK 66 (85)
Confidence 467899999999983 47899999988753 24688887632211 25555444443
No 51
>1vbv_A Hypothetical protein B0966; protein degradation, structural genomics, unknown function; 2.70A {Escherichia coli} SCOP: b.34.17.1
Probab=29.56 E-value=1.9e+02 Score=25.11 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=36.3
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCC-------------------CCeeEEEecCCCCc-e-eeecCcccccCC
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTS-------------------NNTYRITFDRQGLG-T-QSIPDYEVLSND 322 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~-------------------~~~YrV~Fdr~~lg-v-~~VpD~evms~~ 322 (583)
..-+.+||.| +|+. -=|.|.|..+|+. ..-|.|-+|..+.. + .+|+..++.+..
T Consensus 3 ~~kf~IGqvv--rHr~---~gyrGVI~d~Dp~~~~~eew~~~~~~~~~~~~QPfYhVL~e~~~~~~~~~YVaEenL~~~~ 77 (105)
T 1vbv_A 3 ASKFGIGQQV--RHSL---LGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSEL 77 (105)
T ss_dssp CCSSCTTCEE--EETT---TCCEEEEEEEECC------------------CCCEEEEEEECSSCCEEEEEEEGGGEEECC
T ss_pred cceecCCCEE--Eecc---cCCCEEEEeECcccCCCHHHHHhccccCccCCCCceEEEEeCCCCceeeeEEcHHhccccC
Confidence 3457899999 5543 2378999999983 23677777765522 2 567766665544
Q ss_pred Cc
Q psy9276 323 TP 324 (583)
Q Consensus 323 ~~ 324 (583)
..
T Consensus 78 s~ 79 (105)
T 1vbv_A 78 QD 79 (105)
T ss_dssp CS
T ss_pred CC
Confidence 33
No 52
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.52 E-value=80 Score=26.59 Aligned_cols=42 Identities=17% Similarity=0.286 Sum_probs=32.8
Q ss_pred CCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeee
Q psy9276 270 GTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSI 313 (583)
Q Consensus 270 G~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~V 313 (583)
|..++|.+..|......+.|. |..+.+|.|.|.-.+-|.|.|
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~--d~~dGtY~v~ytP~e~G~h~v 62 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNIT--DNKDGTITVRYAPTEKGLHQM 62 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEE--ECSSSCEEEEECCSSCEEEEE
T ss_pred CCCEEEEEECCCCCccceEEE--ECCCCEEEEEEEccCCEEEEE
Confidence 567888887775445666666 677889999999999898775
No 53
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=26.25 E-value=38 Score=22.03 Aligned_cols=16 Identities=31% Similarity=0.304 Sum_probs=12.9
Q ss_pred cchhHHHHHHhhhC-CC
Q psy9276 205 FSRTEWSMVRRMVG-KP 220 (583)
Q Consensus 205 LtR~EW~~IRr~mG-KP 220 (583)
++--|++.||..|| ||
T Consensus 2 ~siEEtnk~r~~lGLkp 18 (21)
T 3plv_C 2 LSIEETNELRASLGLKL 18 (26)
T ss_dssp CCHHHHHHHHHHTTCCC
T ss_pred ccHHHHHHHHHHcCCCC
Confidence 45679999999999 54
No 54
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=24.98 E-value=1.3e+02 Score=27.16 Aligned_cols=67 Identities=13% Similarity=0.231 Sum_probs=43.4
Q ss_pred CCCCCccCCC-CCCCC-------ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccC
Q psy9276 250 CGDQTTVKDI-PSEIP-------IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321 (583)
Q Consensus 250 ~~d~~~~~~L-P~~IP-------~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~ 321 (583)
|.|-+..++| |.+|- -|-.+|+.|.++.. ...+|.|...+..+. ..|.|.|+-.. ...++=-+|...
T Consensus 40 F~DgS~s~dl~PedIvs~dc~~~GpP~~G~~V~V~W~--DG~~y~a~f~g~~~~-~~YtV~FeDgs--~~~~kR~~iyt~ 114 (123)
T 2xdp_A 40 FDDGSFSRDTFPEDIVSRDCLKLGPPAEGEVVQVKWP--DGKLYGAKYFGSNIA-HMYQVEFEDGS--QIAMKREDIYTL 114 (123)
T ss_dssp ETTSCEEEEECGGGBCSSCHHHHCCCCTTCEEEEECT--TSCEEEEEEEEEEEE-EEEEEECTTSC--EEEEEGGGCCCS
T ss_pred cCCCCccCCCCHhHcccccccccCCCCCCCEEEEEcC--CCCEEeEEEeeeeeE-EEEEEEECCCC--eEEecHHHcccc
Confidence 3454444555 44433 47789999999853 344899999976553 69999998765 444444444433
No 55
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=24.71 E-value=1.6e+02 Score=26.83 Aligned_cols=49 Identities=10% Similarity=0.177 Sum_probs=35.2
Q ss_pred cccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcc
Q psy9276 266 QLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYE 317 (583)
Q Consensus 266 PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~e 317 (583)
...+|+-+.|.... .+.-|.|.|..++.. +.|.|.|--=|. ++.+.|..
T Consensus 47 ~~~~G~~c~A~~~~-d~~wyRa~I~~~~~~-~~~~V~fvDyGn-~~~v~~lr 95 (169)
T 3ntk_A 47 DLKEGALCVAQFPE-DEVFYRAQIRKVLDD-GKCEVHFIDFGN-NAVTQQFR 95 (169)
T ss_dssp CCCTTCEEEEEETT-TTEEEEEEEEEECST-TCEEEEETTTTE-EEEESCEE
T ss_pred CCCCCCEEEEEECC-CCcEEEEEEEEECCC-CEEEEEEEecCC-eEEhhhhh
Confidence 56899999999854 345899999999875 489999964332 34454433
No 56
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=24.62 E-value=1.9e+02 Score=26.19 Aligned_cols=54 Identities=13% Similarity=0.183 Sum_probs=35.6
Q ss_pred ccccCCCEEEEEecCCCC----cceeeEEEEEeCCCCeeEEEecCCC-CceeeecCcccccC
Q psy9276 265 IQLVVGTKVTARVRSPQD----GLFTGVVDAYDTSNNTYRITFDRQG-LGTQSIPDYEVLSN 321 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~----gL~~G~Vlavd~~~~~YrV~Fdr~~-lgv~~VpD~evms~ 321 (583)
..+.+|++|-++.+. .+ |=+.|+|..+- ++-|.|.|+-=+ =..++|.--++=+.
T Consensus 59 ~~f~~gd~VEV~~~~-~d~ep~gWw~a~I~~~k--g~f~~V~y~~~~~~~~EiV~~~rlR~~ 117 (128)
T 3h8z_A 59 KEITEGDEVEVYSRA-NEQEPCGWWLARVRMMK--GDFYVIEYAACDATYNEIVTLERLRPV 117 (128)
T ss_dssp -CCCTTCEEEEEECC----CCCEEEEEEEEEEE--TTEEEEEETTC----CEEECGGGEEEC
T ss_pred cCCCCCCEEEEEecC-CCCCcCccEEEEEEEee--CCEEEEEEcCCCCCcceEEehhheEeC
Confidence 568999999999864 24 78999999876 479999976422 11455554444333
No 57
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=24.58 E-value=99 Score=28.34 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=24.7
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEE-eCCCCee
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAY-DTSNNTY 299 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlav-d~~~~~Y 299 (583)
-..+.+|.+|+++|- + .+|.|+|+.+ |+.+..+
T Consensus 5 ~p~f~~gE~VlcfHg-~--~~YeAKIl~i~d~~~~~v 38 (130)
T 3e9g_A 5 EQEFALGGRCLAFHG-P--LMYEAKILKIWDPSSKMY 38 (130)
T ss_dssp --CCCTTCEEEEEET-T--EEEEEEEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeC-C--cceeeEEEEeeCCCccee
Confidence 347899999999984 2 5999999987 5655554
No 58
>3cnr_A Type IV fimbriae assembly protein; PILZ, xanthomonas citri, type IV pilus assembly, unknown function; HET: MSE; 1.90A {Xanthomonas axonopodis PV} PDB: 3dsg_A
Probab=24.01 E-value=86 Score=27.69 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=32.3
Q ss_pred CccccCCCEEEEEecCCCCc---ceeeEEEEEeCCCCeeEEEecCCCCceeeec
Q psy9276 264 PIQLVVGTKVTARVRSPQDG---LFTGVVDAYDTSNNTYRITFDRQGLGTQSIP 314 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~g---L~~G~Vlavd~~~~~YrV~Fdr~~lgv~~Vp 314 (583)
..|+.+|+.|.-.+..|... -..|+|+-+.+.... --..+|.||+++.
T Consensus 39 ~~~~~~G~~V~l~l~Lp~~~~~i~~~GkVvWi~p~~~~---~~~p~G~GVqF~~ 89 (117)
T 3cnr_A 39 PKRYMLGDEVFLLLTLPDSSERLPVAGKVIWTTPAGAQ---GNRAAGIGVQFPD 89 (117)
T ss_dssp CSCCCTTCEEEEEEECTTCSCEEEEEEEEEEEECC---------CCEEEEECCS
T ss_pred CCccCCCCEEEEEEEcCCCCceEEEEEEEEEecCCCCC---CCCCCceEEEEec
Confidence 37899999999999777443 477999999876433 1224567777753
No 59
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.65 E-value=1.1e+02 Score=26.00 Aligned_cols=52 Identities=19% Similarity=0.350 Sum_probs=35.9
Q ss_pred CCCCCccccC-CCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeee
Q psy9276 260 PSEIPIQLVV-GTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSI 313 (583)
Q Consensus 260 P~~IP~PL~V-G~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~V 313 (583)
|..+-.|... +..++|.+..|........|. |..+.+|.|.|.-.+-|.|.|
T Consensus 18 p~~f~i~~~~g~~~ltv~V~~PsG~~~~~~v~--d~~dGtY~v~ytP~e~G~h~v 70 (95)
T 2ee9_A 18 PFDLVIPFAVRKGEITGEVHMPSGKTATPEIV--DNKDGTVTVRYAPTEVGLHEM 70 (95)
T ss_dssp CCEEECSSCCCTTSEEEEEECTTSCEECCEEE--ECSSSCEEEECCCCSSEEEEE
T ss_pred CEEEEeecCCCCCCEEEEEECCCCCccccEEE--eCCCCeEEEEEEecCCEeEEE
Confidence 4443333333 456777777775556677776 677889999999999898775
No 60
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.35 E-value=84 Score=26.80 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=30.1
Q ss_pred CCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeee
Q psy9276 270 GTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSI 313 (583)
Q Consensus 270 G~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~V 313 (583)
|..++|.+..|......+.|. |..+.+|.|.|.-.+-|.|.|
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~--d~~dGty~v~ytP~e~G~h~v 71 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIV--PMGKNSHCVRFVPQEMGVHTV 71 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEE--ECSSSEEEEEBCCCTTCEEEE
T ss_pred CCCEEEEEECCCCCEeeeEEE--ECCCCEEEEEEEecCCEeEEE
Confidence 344566665664435666665 667789999999999998876
No 61
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=23.24 E-value=1.4e+02 Score=28.55 Aligned_cols=66 Identities=20% Similarity=0.233 Sum_probs=47.7
Q ss_pred CCCCCCCCccccCCCEEEEEecCCC--CcceeeEEEEEeCCCCeeEEEecCCCCc-eeeecCcccccCC
Q psy9276 257 KDIPSEIPIQLVVGTKVTARVRSPQ--DGLFTGVVDAYDTSNNTYRITFDRQGLG-TQSIPDYEVLSND 322 (583)
Q Consensus 257 ~~LP~~IP~PL~VG~kV~Arl~~~~--~gL~~G~Vlavd~~~~~YrV~Fdr~~lg-v~~VpD~evms~~ 322 (583)
..+|..--..+.+|+.|-|++.... ..-.-+.|+.|+..++.|-|+=.-++-. ...++-.+|+++-
T Consensus 35 Ga~p~~~~~~~~~G~~VAakvk~~~~~~~WILa~Vv~~~~~~~rYeV~D~d~eg~~~~~~s~~~IIPLP 103 (180)
T 3mea_A 35 GAIPASGDYVARPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEEGKERHTLSRRRVIPLP 103 (180)
T ss_dssp TTCCCCTTCCCCTTCEEEEEEECCC--EEEEEEEEEEEETTTTEEEEEECCTTCCEEEEEEGGGEEECC
T ss_pred ccccCCCCcccCCCCEEEEEcCCCCCCccEEEEEEEEEcCCCCEEEEecCCCCCceeEEeCHHHEEECC
Confidence 4455555568899999999986432 3467899999999889999987666521 4666667776664
No 62
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=23.11 E-value=1.6e+02 Score=29.49 Aligned_cols=43 Identities=23% Similarity=0.254 Sum_probs=35.5
Q ss_pred CCccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 263 IPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 263 IP~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
-...+.+|.|+-|.-+....-++.++|..|. +...+|.||.-+
T Consensus 140 ~~~~F~vGMKLEavD~~np~~icvATV~~v~--g~rl~v~fDGw~ 182 (265)
T 2r58_A 140 EENLFKVGQKLEAVDKKNPQLICCATVDAIK--DDQIHVTFDGWR 182 (265)
T ss_dssp SSCCCCTTCEEEEECTTSTTCEEEEEEEEEE--TTEEEEEETTSC
T ss_pred cccccccCcEEEeccCCCCCCEEEEEEEEec--CCEEEEEeCCCC
Confidence 3457999999999987754679999999997 478999999554
No 63
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=21.86 E-value=5.2e+02 Score=34.67 Aligned_cols=107 Identities=15% Similarity=0.148 Sum_probs=71.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHHHhhcHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhc
Q psy9276 373 PVELLEQVVRFKKLLKFKKTEV-YQIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLS 451 (583)
Q Consensus 373 p~~lL~~lv~LsKlL~~Ke~lV-~~L~~MN~EAE~~~s~g~~~~e~FQrrYA~vvi~Le~vN~~L~~~L~~Lq~~~~~la 451 (583)
|..+|+.|--..++|..|+.-+ .+..+++...++.....+ .=++.|..-+..-..|+.-+++-+..|..+..-..+-.
T Consensus 1894 P~syLeli~~y~~ll~~K~~el~~~~~rl~~GL~KL~et~~-~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae 1972 (3245)
T 3vkg_A 1894 PRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEA-QVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAE 1972 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887544 344556666655544331 12568899999999999999999999888876444322
Q ss_pred ccccccccccccCCchHHHHHHHHHHHHHHHHHHhhcC
Q psy9276 452 VTSENMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNG 489 (583)
Q Consensus 452 ~~~~~~~~~~~~~~ps~lre~Cr~~A~e~~~~v~~~n~ 489 (583)
.. .. .-....+++..+++|+....+.+..
T Consensus 1973 ~~----k~-----~v~~~~~~~~~~~~ei~~~k~~~e~ 2001 (3245)
T 3vkg_A 1973 IK----QK-----DARELQVQLDVRNKEIAVQKVKAYA 2001 (3245)
T ss_dssp HH----HH-----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH----HH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 1133556666666666666665554
No 64
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=21.38 E-value=2.1e+02 Score=27.22 Aligned_cols=53 Identities=9% Similarity=0.149 Sum_probs=38.7
Q ss_pred ccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCCCceeeecCcccccC
Q psy9276 265 IQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321 (583)
Q Consensus 265 ~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~lgv~~VpD~evms~ 321 (583)
....+|+-+.|... ...-|.|.|+.++.. .+|.|.|---| .++.|+=.++.++
T Consensus 64 ~~~~~G~~c~a~~~--d~~wyRa~V~~~~~~-~~~~V~~vDyG-n~~~v~~~~lr~l 116 (246)
T 2hqx_A 64 YAPRRGEFCIAKFV--DGEWYRARVEKVESP-AKIHVFYIDYG-NREVLPSTRLGTL 116 (246)
T ss_dssp CCCCTTCEEEEECT--TSCEEEEEEEEEEET-TEEEEEETTTC-CEEEECGGGEECC
T ss_pred CCCCCCCEEEEEcC--CCCEEEEEEEEEcCC-CeEEEEEEeCC-CeEEEeHHHhhcC
Confidence 34579999999875 356899999999753 58999997444 2677766565554
No 65
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=21.25 E-value=1.1e+02 Score=28.06 Aligned_cols=42 Identities=21% Similarity=0.343 Sum_probs=32.6
Q ss_pred CccccCCCEEEEEecCCCCcceeeEEEEEeCCCCeeEEEecCCC
Q psy9276 264 PIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQG 307 (583)
Q Consensus 264 P~PL~VG~kV~Arl~~~~~gL~~G~Vlavd~~~~~YrV~Fdr~~ 307 (583)
..++.+|++|...- +|..| +.|.|..+|..+....|..+--|
T Consensus 125 ~~~~~~Gd~V~V~~-GPf~g-~~G~v~~v~~~k~r~~V~v~ifg 166 (181)
T 2jvv_A 125 KTLFEPGEMVRVND-GPFAD-FNGVVEEVDYEKSRLKVSVSIFG 166 (181)
T ss_dssp CCCCCTTEEEEECS-STTTT-EEEEEEEEETTTTEEEEEEEETT
T ss_pred cccCCCCCEEEEec-cCCCC-cEEEEEEEeCCCCEEEEEEEECC
Confidence 35788999999863 56655 68999999987778888777544
Done!