Your job contains 1 sequence.
>psy9276
MEEDPPIQHQEIIEEGLREEEVGLEPDLSKVKEEVIIKMEPEDDVDPEAESLNRRGMPRR
TIKKNRYIFDDMFNAGATSPRVNKTPNKTPTKKATPNSKKKKTPTSLVKFSSSSKLQSTL
TETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRFVCYEFFYSNID
RPLFNDNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFFTEERINLERRRN
VIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYR
ITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQMFFASVPNDHTNRTGKPEPEAMDANH
IDKELEGMLGEYPVELLEQVVRFKKLLKFKKTEVYQIRDMNSEAERRQLYGEPYDRAFQK
KYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSENMSSQLYALSPSDLQQETYIAAQEI
VDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTLSHSSRSAYEVEVLNKTMSDIYKKLS
PNNQSVFENCIGVHMEQIKAALAGERGSLATLTKPVSQNTFNK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9276
(583 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1MIQ3 - symbol:LOC534587 "Uncharacterized prot... 868 7.7e-87 1
UNIPROTKB|H0Y322 - symbol:LIN9 "Protein lin-9 homolog" sp... 866 1.3e-86 1
UNIPROTKB|Q5TKA1 - symbol:LIN9 "Protein lin-9 homolog" sp... 866 1.3e-86 1
UNIPROTKB|Q5ZMF8 - symbol:LIN9 "Uncharacterized protein" ... 864 2.0e-86 1
MGI|MGI:1919818 - symbol:Lin9 "lin-9 homolog (C. elegans)... 863 2.6e-86 1
RGD|1591104 - symbol:Lin9 "lin-9 homolog (C. elegans)" sp... 863 2.6e-86 1
UNIPROTKB|F1PWI7 - symbol:LIN9 "Uncharacterized protein" ... 862 3.3e-86 1
ZFIN|ZDB-GENE-030131-1747 - symbol:lin9 "lin-9 homolog (C... 818 8.2e-85 2
UNIPROTKB|C9J5J4 - symbol:LIN9 "Protein lin-9 homolog" sp... 830 8.2e-83 1
FB|FBgn0023509 - symbol:mip130 "Myb-interacting protein 1... 492 1.5e-61 3
WB|WBGene00002998 - symbol:lin-9 species:6239 "Caenorhabd... 369 1.1e-50 2
UNIPROTKB|P30630 - symbol:lin-9 "Protein lin-9" species:6... 369 1.1e-50 2
FB|FBgn0004372 - symbol:aly "always early" species:7227 "... 256 6.8e-19 1
DICTYBASE|DDB_G0286665 - symbol:lin9 "RmlC-like cupin fam... 157 2.4e-12 2
TAIR|locus:2143666 - symbol:ALY1 "ALWAYS EARLY 1" species... 158 7.6e-08 2
TAIR|locus:2089438 - symbol:ALY3 "ALWAYS EARLY 3" species... 149 2.0e-07 2
>UNIPROTKB|F1MIQ3 [details] [associations]
symbol:LOC534587 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR010561 Pfam:PF06584 GeneTree:ENSGT00390000003188
OMA:NEPNETM EMBL:DAAA02042671 IPI:IPI00841368
Ensembl:ENSBTAT00000047257 Uniprot:F1MIQ3
Length = 541
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 196/475 (41%), Positives = 285/475 (60%)
Query: 110 FSSSSKLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRF 169
FS Q T +P++ N +K S+PD+ Q++G +LRNLLKLPKA+++
Sbjct: 64 FSDEDDRQIN-TRSPKR-NQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKW 121
Query: 170 VCYEFFYSNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFF 228
YE+FYSNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF
Sbjct: 122 CIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFF 181
Query: 229 TEERINLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGV 288
EER L+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG
Sbjct: 182 EEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQ 241
Query: 289 VDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM----FFASVPNDH 344
+DA DT N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P H
Sbjct: 242 IDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIAAFGQQRPSRFFMTPPRLH 301
Query: 345 -TNRTGKP----EPEAMDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVY 395
T P +P + + ++ G LG +PVE L QV R +
Sbjct: 302 YTPPLQSPIHDNDP-LLGQSPWRSKISGSDTETLGGFPVEFLIQVTRLSKILMIKKEHIK 360
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSE 455
++R+MN+EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ +
Sbjct: 361 KLREMNTEAEKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQ 419
Query: 456 NMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTL 515
+ A P+D+++ AQEIV N G V+++ + LI+ LTA++LQIK L
Sbjct: 420 GLQP---ADQPTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCL 476
Query: 516 SHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSL 569
+ +++E + L +++DI + +N S F+N + +H+ I++ L+ + G+L
Sbjct: 477 AEGGDLNSFEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLS-QMGNL 530
>UNIPROTKB|H0Y322 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 InterPro:IPR010561
Pfam:PF06584 OMA:NEPNETM HGNC:HGNC:30830 EMBL:AL359742
EMBL:BX284931 ProteinModelPortal:H0Y322 Ensembl:ENST00000366808
Bgee:H0Y322 Uniprot:H0Y322
Length = 613
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 195/475 (41%), Positives = 283/475 (59%)
Query: 110 FSSSSKLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRF 169
FS Q T +P++ N +K S+PD+ Q++G +LRNLLKLPKA+++
Sbjct: 135 FSDEDDRQIN-TRSPKR-NQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKW 192
Query: 170 VCYEFFYSNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFF 228
YE+FYSNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF
Sbjct: 193 CIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFF 252
Query: 229 TEERINLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGV 288
EER L+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG
Sbjct: 253 EEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQ 312
Query: 289 VDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM-----FFASVPND 343
+DA DT N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P
Sbjct: 313 IDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRL 372
Query: 344 H-TNRTGKP---EPEAMDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVY 395
H T P + + ++ G LG +PVE L QV R +
Sbjct: 373 HYTPPLQSPIIDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTRLSKILMIKKEHIK 432
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSE 455
++R+MN+EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ +
Sbjct: 433 KLREMNTEAEKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQ 491
Query: 456 NMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTL 515
+ A P+D+++ AQEIV N G V+++ + LI+ LTA++LQIK L
Sbjct: 492 GLQP---ADQPTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCL 548
Query: 516 SHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSL 569
+ +++E + L +++DI + +N S F+N + +H+ I++ L+ + G+L
Sbjct: 549 AEGGDLNSFEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLS-QMGNL 602
>UNIPROTKB|Q5TKA1 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_115566 GO:GO:0005654
GO:GO:0006260 eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GO:GO:0000278 CTD:286826 HOGENOM:HOG000007517 HOVERGEN:HBG057743
OrthoDB:EOG4R502K EMBL:AY786184 EMBL:AF190323 EMBL:AF190324
EMBL:AK126177 EMBL:BX537869 EMBL:BC043444 EMBL:BC045625
IPI:IPI00445335 IPI:IPI00844013 IPI:IPI01012571
RefSeq:NP_001257338.1 RefSeq:NP_001257339.1 RefSeq:NP_775106.2
UniGene:Hs.120817 IntAct:Q5TKA1 MINT:MINT-4054198 STRING:Q5TKA1
PhosphoSite:Q5TKA1 DMDM:74708186 PaxDb:Q5TKA1 PRIDE:Q5TKA1
Ensembl:ENST00000328205 Ensembl:ENST00000366801 GeneID:286826
KEGG:hsa:286826 UCSC:uc001hqa.2 UCSC:uc001hqb.2 UCSC:uc001hqc.3
GeneCards:GC01M226420 HGNC:HGNC:30830 HPA:HPA030241 MIM:609375
neXtProt:NX_Q5TKA1 PharmGKB:PA134970771 InParanoid:Q5TKA1
GenomeRNAi:286826 NextBio:96300 ArrayExpress:Q5TKA1 Bgee:Q5TKA1
CleanEx:HS_LIN9 Genevestigator:Q5TKA1 GermOnline:ENSG00000183814
Uniprot:Q5TKA1
Length = 542
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 195/475 (41%), Positives = 283/475 (59%)
Query: 110 FSSSSKLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRF 169
FS Q T +P++ N +K S+PD+ Q++G +LRNLLKLPKA+++
Sbjct: 64 FSDEDDRQIN-TRSPKR-NQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKW 121
Query: 170 VCYEFFYSNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFF 228
YE+FYSNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF
Sbjct: 122 CIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFF 181
Query: 229 TEERINLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGV 288
EER L+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG
Sbjct: 182 EEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQ 241
Query: 289 VDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM-----FFASVPND 343
+DA DT N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P
Sbjct: 242 IDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRL 301
Query: 344 H-TNRTGKP---EPEAMDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVY 395
H T P + + ++ G LG +PVE L QV R +
Sbjct: 302 HYTPPLQSPIIDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTRLSKILMIKKEHIK 361
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSE 455
++R+MN+EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ +
Sbjct: 362 KLREMNTEAEKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQ 420
Query: 456 NMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTL 515
+ A P+D+++ AQEIV N G V+++ + LI+ LTA++LQIK L
Sbjct: 421 GLQP---ADQPTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCL 477
Query: 516 SHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSL 569
+ +++E + L +++DI + +N S F+N + +H+ I++ L+ + G+L
Sbjct: 478 AEGGDLNSFEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLS-QMGNL 531
>UNIPROTKB|Q5ZMF8 [details] [associations]
symbol:LIN9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 OMA:NEPNETM OrthoDB:EOG4R502K EMBL:AADN02012179
EMBL:AJ719426 IPI:IPI00651557 RefSeq:NP_001026213.1
UniGene:Gga.20720 STRING:Q5ZMF8 Ensembl:ENSGALT00000015028
GeneID:421316 KEGG:gga:421316 InParanoid:Q5ZMF8 NextBio:20824100
Uniprot:Q5ZMF8
Length = 450
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 192/443 (43%), Positives = 274/443 (61%)
Query: 143 SSPDRNLGQRVGMKLRNLLKLPKAYRFVCYEFFYSNIDRPLFN-DNDFITCMKESFPQLK 201
S+PD+ Q++G++LRNLLKLPKA+++ YE+FYSNID+PLF DNDF C+KESFP LK
Sbjct: 2 STPDKKASQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLK 61
Query: 202 KYVFSRTEWSMVRRMVGKPRRCSSSFFTEERINLERRRNVIRYLQQGKCGDQTTVKDIPS 261
+R EW +RR++GKPRRCSS+FF EER L+++R IR LQQ K D + KD+P
Sbjct: 62 TRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADISQFKDLPD 121
Query: 262 EIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321
EIP+ LV+GTKVTAR+R DGLFTG ++A DT N TYR+TFDR GLGTQ+IPDYEVLSN
Sbjct: 122 EIPLPLVIGTKVTARLRGVHDGLFTGQIEAVDTLNATYRVTFDRAGLGTQTIPDYEVLSN 181
Query: 322 DTPETLNRQSFLQM-----FFASVPNDH-TNRTGKP----EP---EAMDANHIDKELEGM 368
+ ET+ +F Q FF + P H T P +P ++ N I
Sbjct: 182 EPHETMPIAAFGQKQRPSRFFMTPPRLHYTPSLQSPITDSDPLLGQSSWKNKISGTDSET 241
Query: 369 LGEYPVELLEQVVRXXXXXXXXXTEVYQIRDMNSEAERRQLYGEPYDRAFQKKYAGHILR 428
LG +PVE L QV R + Q+R+MN+EAE+ + Y P FQ++YA +L
Sbjct: 242 LGGFPVEFLIQVTRLSKILMIKKEHIKQLREMNTEAEKLKSYSMPISIEFQRRYATIVLD 301
Query: 429 LEKINKDVNTVLASLSVNLKKLSVTSENMSSQLYALSPSDLQQETYIAAQEIVDTVNKKN 488
LE++NKD+N VL + +L+ + + A P+DL++ AQEIV N
Sbjct: 302 LEQLNKDLNKVLHKVQQYCYELA-PDQGLQP---ADQPTDLRRRCEEEAQEIVRQANSST 357
Query: 489 -GNKIVDDQPVVSLITDLTALVLQIKTLSHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSV 546
G V+ + + LI+ LTA++LQIK L+ +++E + L +++DI + +N S
Sbjct: 358 TGQLCVESENLTDLISRLTAILLQIKCLAEGGDLNSFEFKSLTDSLNDIKNSIDSSNISC 417
Query: 547 FENCIGVHMEQIKAALAGERGSL 569
F+N + +H+ I++ L+ + G+L
Sbjct: 418 FQNNVEIHVAHIQSGLS-QMGNL 439
>MGI|MGI:1919818 [details] [associations]
symbol:Lin9 "lin-9 homolog (C. elegans)" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
MGI:MGI:1919818 GO:GO:0005654 GO:GO:0006260 GO:GO:0007049
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 OMA:NEPNETM OrthoDB:EOG4R502K EMBL:AK042357
EMBL:AK052618 EMBL:AF190325 IPI:IPI00226441 IPI:IPI00515433
IPI:IPI00788457 RefSeq:NP_001096652.1 RefSeq:NP_780395.2
UniGene:Mm.275044 STRING:Q8C735 PhosphoSite:Q8C735 PaxDb:Q8C735
PRIDE:Q8C735 Ensembl:ENSMUST00000085803 Ensembl:ENSMUST00000085804
GeneID:72568 KEGG:mmu:72568 UCSC:uc007dwk.2 UCSC:uc007dwm.2
InParanoid:Q8C735 NextBio:336515 Bgee:Q8C735 CleanEx:MM_LIN9
Genevestigator:Q8C735 GermOnline:ENSMUSG00000058729 Uniprot:Q8C735
Length = 542
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 194/475 (40%), Positives = 286/475 (60%)
Query: 110 FSSSSKLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRF 169
FS Q T++P++ N +K S+PD+ Q++G +LRNLLKLPKA+++
Sbjct: 64 FSDEDDRQIN-TKSPKR-NQRVAMIPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKW 121
Query: 170 VCYEFFYSNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFF 228
YE+FYSNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF
Sbjct: 122 CIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFF 181
Query: 229 TEERINLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGV 288
EER L+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG
Sbjct: 182 EEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGIHDGLFTGQ 241
Query: 289 VDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM-----FFASVPND 343
+DA DT N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P
Sbjct: 242 IDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPISAFGQKQRPSRFFMTPPRL 301
Query: 344 H-TNRTGKPEPEA---MDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVY 395
H T P + + + ++ G LG +PVE L QV + +
Sbjct: 302 HYTPPLQSPITDGDPLLGQSPWRSKVSGSDTETLGGFPVEFLIQVTKLSKILMIKKEHIK 361
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSE 455
++R+MN+EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ +
Sbjct: 362 KLREMNTEAEKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQ 420
Query: 456 NMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTL 515
+ A P+D+++ AQEIV N +G V+++ + LI+ LTA++LQIK L
Sbjct: 421 GLQP---ADQPTDMRRRCEEEAQEIVRQANSASGQPCVENENLTDLISRLTAILLQIKCL 477
Query: 516 SHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSL 569
+ +++E + L +++DI + +N S F+N + +H+ I++ L+ + G+L
Sbjct: 478 AEGGDLNSFEFKSLTDSLNDIKNTIDASNISCFQNNVEIHVAHIQSGLS-QMGNL 531
>RGD|1591104 [details] [associations]
symbol:Lin9 "lin-9 homolog (C. elegans)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] REFSEQ:XM_003752692 Ncbi:XP_003752740
Length = 552
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 194/475 (40%), Positives = 286/475 (60%)
Query: 110 FSSSSKLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRF 169
FS Q T++P++ N +K S+PD+ Q++G +LRNLLKLPKA+++
Sbjct: 74 FSDEDDRQIN-TKSPKR-NQRVAMIPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKW 131
Query: 170 VCYEFFYSNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFF 228
YE+FYSNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF
Sbjct: 132 CIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFF 191
Query: 229 TEERINLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGV 288
EER L+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG
Sbjct: 192 EEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGIHDGLFTGQ 251
Query: 289 VDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM-----FFASVPND 343
+DA DT N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P
Sbjct: 252 IDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRL 311
Query: 344 H-TNRTGKPEPEA---MDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVY 395
H T P + + + ++ G LG +PVE L QV + +
Sbjct: 312 HYTPPLQSPITDGDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTKLSKILMIKKEHIK 371
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSE 455
++R+MN+EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ +
Sbjct: 372 KLREMNTEAEKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQ 430
Query: 456 NMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTL 515
+ A P+D+++ AQEIV N +G V+++ + LI+ LTA++LQIK L
Sbjct: 431 GLQP---ADQPTDMRRRCEEEAQEIVRQANSASGQPCVENENLTDLISRLTAILLQIKCL 487
Query: 516 SHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSL 569
+ +++E + L +++DI + +N S F+N + +H+ I++ L+ + G+L
Sbjct: 488 AEGGDLNSFEFKSLTDSLNDIKNTIDASNISCFQNNVEIHVAHIQSGLS-QMGNL 541
>UNIPROTKB|F1PWI7 [details] [associations]
symbol:LIN9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR010561 Pfam:PF06584 GeneTree:ENSGT00390000003188
EMBL:AAEX03005273 EMBL:AAEX03005274 Ensembl:ENSCAFT00000038412
Uniprot:F1PWI7
Length = 490
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 194/475 (40%), Positives = 284/475 (59%)
Query: 110 FSSSSKLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRF 169
FS Q T +P++ N +K S+PD+ Q++G +LRNLLKLPKA+++
Sbjct: 12 FSDEDDRQIN-TRSPKR-NQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKW 69
Query: 170 VCYEFFYSNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFF 228
YE+FYSNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF
Sbjct: 70 CIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFF 129
Query: 229 TEERINLERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGV 288
EER L+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG
Sbjct: 130 EEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQ 189
Query: 289 VDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM-----FFASVPND 343
+DA DT N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P
Sbjct: 190 IDAVDTFNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRL 249
Query: 344 H-TNRTGKPEPE---AMDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVY 395
H T P + + + ++ G LG +PVE L QV + +
Sbjct: 250 HYTPPLQSPITDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTKLSKILMIKKEHIK 309
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSE 455
++R+MN+EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ +
Sbjct: 310 KLREMNTEAEKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQ 368
Query: 456 NMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTL 515
+ A P+D+++ AQEIV N G V+++ + LI+ LTA++LQIK L
Sbjct: 369 GLQP---ADQPTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCL 425
Query: 516 SHSSR-SAYEVEVLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSL 569
+ +++E + L +++DI + +N S F+N + +H+ I++ L+ + G+L
Sbjct: 426 AEGGDLNSFEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLS-QMGNL 479
>ZFIN|ZDB-GENE-030131-1747 [details] [associations]
symbol:lin9 "lin-9 homolog (C. elegans)"
species:7955 "Danio rerio" [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
ZFIN:ZDB-GENE-030131-1747 GO:GO:0005634 GO:GO:0051726
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 EMBL:BX470188 IPI:IPI00483095
RefSeq:NP_001038411.1 UniGene:Dr.76676 Ensembl:ENSDART00000045185
GeneID:560867 KEGG:dre:560867 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 InParanoid:Q5RHQ8 OMA:NEPNETM OrthoDB:EOG4R502K
NextBio:20883652 ArrayExpress:Q5RHQ8 Bgee:Q5RHQ8 Uniprot:Q5RHQ8
Length = 543
Score = 818 (293.0 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 181/445 (40%), Positives = 273/445 (61%)
Query: 143 SSPDRNLGQRVGMKLRNLLKLPKAYRFVCYEFFYSNIDRPLFN-DNDFITCMKESFPQLK 201
++PD+ + Q++G++LRNLLKLPKA+++ YE+FYSNIDRPLF DNDF C+KESFP LK
Sbjct: 93 ATPDKRVSQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDRPLFEGDNDFCLCLKESFPNLK 152
Query: 202 KYVFSRTEWSMVRRMVGKPRRCSSSFFTEERINLERRRNVIRYLQQGKCGDQTTVKDIPS 261
+R EW +RR++GKPRRCSS+FF EER+ L+++R +R LQQ K D + KD+P
Sbjct: 153 TRKLTRVEWGTIRRLMGKPRRCSSAFFAEERMALKQKRQKMRLLQQRKITDMSLCKDLPD 212
Query: 262 EIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSN 321
EIP+ LV+GTKVTAR+R DGLFTG +DA DTS TYR+TFDR GLGT ++PDYEVLSN
Sbjct: 213 EIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTSAATYRVTFDRNGLGTHTVPDYEVLSN 272
Query: 322 DTPETLNRQSFLQM-----FFASVPNDHTNRTGKPEPEAMDANHIDKE------LEGM-- 368
+ ET+ +F Q F + + TG + MD + + + L G
Sbjct: 273 EPHETMPISAFAQKQRPPRFQNFLTPPRGSYTGSTQSILMDNDPLFSQSPWRSKLTGTDG 332
Query: 369 --LGEYPVELLEQVVRXXXXXXXXXTEVYQIRDMNSEAERRQLYGEPYDRAFQKKYAGHI 426
LG +PV+ L QV R + +++MN+EAE+ + Y P QK+YA +
Sbjct: 333 ETLGGFPVKFLVQVTRLSKILMIKKEHIKHLKEMNTEAEKLKSYSMPIGLDLQKRYATTV 392
Query: 427 LRLEKINKDVNTVLASLSVNLKKLSVTSENMSSQLYALSPSDLQQETYIAAQEIVDTVNK 486
L LE++NKD+N VL + +L+ + M A PS+L++ +Q+++ N
Sbjct: 393 LDLEQLNKDLNKVLHEVQQFCFELA-PDQGMQP---ADQPSELRRRCEEESQDVLRQNNT 448
Query: 487 -KNGNKIVDDQPVVSLITDLTALVLQIKTLSHSSR-SAYEVEVLNKTMSDIYKKLSPNNQ 544
+G V + + LI+ LTAL+LQI+ L+ +++E + L +++DI + +N
Sbjct: 449 LASGEPRVQNTELTQLISRLTALLLQIRCLAEGGDLNSFEFKSLTDSLNDIKSSIDDSNL 508
Query: 545 SVFENCIGVHMEQIKAALAGERGSL 569
S F++ + +H+ I++ L+ + G+L
Sbjct: 509 SCFQDNVEIHVAHIQSGLS-QLGNL 532
Score = 50 (22.7 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 115 KLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPK 165
K Q+T + ++ + SK+SR+ C +R + R + + + +P+
Sbjct: 37 KSQTTRGRSSYVSMETPTRSSKRSRLSCEDEERPIASRSPRRSQRVTTMPQ 87
>UNIPROTKB|C9J5J4 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 InterPro:IPR010561
Pfam:PF06584 HOGENOM:HOG000007517 HGNC:HGNC:30830 EMBL:AL359742
EMBL:BX284931 IPI:IPI00946841 ProteinModelPortal:C9J5J4
STRING:C9J5J4 Ensembl:ENST00000481685 UCSC:uc009xel.1
ArrayExpress:C9J5J4 Bgee:C9J5J4 Uniprot:C9J5J4
Length = 489
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 186/442 (42%), Positives = 265/442 (59%)
Query: 118 STLTETPE-KFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRFVCYEFFY 176
S+L +TP K ++ K S+PD+ Q++G +LRNLLKLPKA+++ YE+FY
Sbjct: 50 SSLQKTPVWKGRNTSSAVEMKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFY 109
Query: 177 SNIDRPLFN-DNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFFTEERINL 235
SNID+PLF DNDF C+KESFP LK +R EW +RR++GKPRRCSS+FF EER L
Sbjct: 110 SNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSAL 169
Query: 236 ERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTS 295
+++R IR LQQ K D + KD+P EIP+ LV+GTKVTAR+R DGLFTG +DA DT
Sbjct: 170 KQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTL 229
Query: 296 NNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQM-----FFASVPNDH-TNRTG 349
N TYR+TFDR GLGT +IPDYEVLSN+ ET+ +F Q FF + P H T
Sbjct: 230 NATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRLHYTPPLQ 289
Query: 350 KP---EPEAMDANHIDKELEGM----LGEYPVELLEQVVRXXXXXXXXXTEVYQIRDMNS 402
P + + ++ G LG +PVE L QV R + ++R+MN+
Sbjct: 290 SPIIDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTRLSKILMIKKEHIKKLREMNT 349
Query: 403 EAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSENMSSQLY 462
EAE+ + Y P FQ++YA +L LE++NKD+N VL + +L+ + +
Sbjct: 350 EAEKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELA-PDQGLQP--- 405
Query: 463 ALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTLSHSSR-S 521
A P+D+++ AQEIV N G V+++ + LI+ LTA++LQIK L+ +
Sbjct: 406 ADQPTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCLAEGGDLN 465
Query: 522 AYEVEVLNKTMSDIYKKLSPNN 543
++E + L +++DI + +N
Sbjct: 466 SFEFKSLTDSLNDIKSTIDASN 487
>FB|FBgn0023509 [details] [associations]
symbol:mip130 "Myb-interacting protein 130" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0007307 "eggshell chorion gene amplification"
evidence=IC] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0051297
"centrosome organization" evidence=IMP] GO:GO:0005634 GO:GO:0007052
GO:GO:0051297 GO:GO:0003677 EMBL:AE014298 GO:GO:0000785
GO:GO:0000122 GO:GO:0005700 InterPro:IPR010561 Pfam:PF06584
GO:GO:0031523 GO:GO:0007307 GeneTree:ENSGT00390000003188
FlyBase:FBgn0023509 EMBL:AY819021 EMBL:BT021408 RefSeq:NP_569958.2
UniGene:Dm.33569 DIP:DIP-18949N IntAct:Q9W542 MINT:MINT-1730938
STRING:Q9W542 EnsemblMetazoa:FBtr0070315 GeneID:31153
KEGG:dme:Dmel_CG3480 UCSC:CG3480-RA CTD:31153 InParanoid:Q9W542
OMA:SENFHEM GenomeRNAi:31153 NextBio:772187 Uniprot:Q9W542
Length = 986
Score = 492 (178.3 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 101/210 (48%), Positives = 143/210 (68%)
Query: 146 DRNLGQRVGMKLRNLLKLPKAYRFVCYEFFYSNIDRPLFNDND-FITCMKESFPQLKKYV 204
++ LGQ +G++LRNLLKLPKA+++ E+FYS +D+PLF D F+ + E P+L
Sbjct: 282 NKRLGQSIGLRLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRDEFMNHVNELAPRLGTRS 341
Query: 205 FSRTEWSMVRRMVGKPRRCSSSFFTEERINLERRRNVIRYLQQGKCGD----QTTVKDIP 260
R EW +RR +G+PRRCS+ FF+EER L+R+R VIR LQ K G+ + + D+P
Sbjct: 342 LIRHEWVNIRRRMGRPRRCSAKFFSEERKELDRKRQVIRTLQSRKPGEFKDSVSMLSDMP 401
Query: 261 SEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLS 320
+IP+ L +GTKVTAR+RSPQDG+F G V AYD+ N YR+TF+R GLGT +IPDYE++S
Sbjct: 402 EKIPMTLPLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVTFERIGLGTHAIPDYEIVS 461
Query: 321 NDTPETLNRQSFLQMFFASVPNDH-TNRTG 349
+ E L SF + F ++ + + TN G
Sbjct: 462 ENFHEMLPLHSFTKDFRPNLMSIYQTNNLG 491
Score = 134 (52.2 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 57/237 (24%), Positives = 106/237 (44%)
Query: 338 ASVPNDHTNRTGKPEP----EAMDANHIDKELEGMLGEYPVELLEQVVRXXXXXXXXXTE 393
A+ N + + K +P +++ + I ++L G Y LLE +VR
Sbjct: 539 AAARNALSMKLNKSDPLLGQDSVGVSPIRQQLTRNRG-YSTSLLEHLVRLEKYIAVKADR 597
Query: 394 VYQIRDMNSEAERRQ----LYGEPYDRA-------FQKKYAGHILRLEKINKDVNTVLAS 442
+ ++ MN AE + E DR FQ++YA +I+ +E+IN ++ L
Sbjct: 598 IQRLNKMNGTAELAMGDMISHDENGDRHRRQIAVNFQRQYAFNIVTIERINAELMFELTK 657
Query: 443 LSVNLKKLSVTSENMSSQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLI 502
+ L + N+ + + SP+ L++E A + VD +NK G +V + ++ L+
Sbjct: 658 VQ-ELSSSLTRNPNVQAMI---SPTYLREECRAKASQTVDDINK--G--MVKNTRMIKLL 709
Query: 503 TDLTALVLQIKTLSHSSRSAYEVEVLNKTMSDIYKKL-SPNNQSVFENCIGVHMEQI 558
DLT L++ + L + EVL + ++ L N+ VF+ + +E I
Sbjct: 710 KDLTTLLIVTQNLGGDCEVSEVNEVLEGCLEEVRSNLICSENREVFQMSVQGRLEYI 766
Score = 61 (26.5 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 51 SLNRRGMPRRTIKKNRYIFDD 71
+LN RGMP R K+NR +D+
Sbjct: 130 TLNARGMPARIRKRNRLFYDE 150
Score = 42 (19.8 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 41 PEDDVDPEAESLNRRGMPR 59
PE+ V+P A SL G+ R
Sbjct: 94 PEEQVEPPAFSLATLGLQR 112
>WB|WBGene00002998 [details] [associations]
symbol:lin-9 species:6239 "Caenorhabditis elegans"
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IGI;IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0006351
GO:GO:0008584 GO:GO:0040035 eggNOG:NOG148048 InterPro:IPR010561
Pfam:PF06584 GO:GO:0045138 GO:GO:0040027 EMBL:Z11115 GO:GO:0070176
EMBL:AF269693 EMBL:AF269694 PIR:A88542 PIR:S15794
RefSeq:NP_001023015.1 RefSeq:NP_001023016.1 UniGene:Cel.19461
ProteinModelPortal:P30630 STRING:P30630 PaxDb:P30630 PRIDE:P30630
EnsemblMetazoa:ZK637.7b.1 EnsemblMetazoa:ZK637.7b.2 GeneID:176256
KEGG:cel:CELE_ZK637.7 UCSC:ZK637.7b.2 CTD:176256 WormBase:ZK637.7a
WormBase:ZK637.7b GeneTree:ENSGT00390000003188 HOGENOM:HOG000018119
InParanoid:P30630 OMA:KPRRCSQ NextBio:891788 Uniprot:P30630
Length = 644
Score = 369 (135.0 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 77/204 (37%), Positives = 127/204 (62%)
Query: 143 SSPDRNLGQRVGMK-LRNLLKLPKAYRFVCYEFFYSNIDRPLFND-NDFITCMKESFPQL 200
+S D + R +K L NLL+ KA ++V EFFYS ID +F + N+F T ++ESFP L
Sbjct: 193 TSEDVSTFMRANIKKLYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATIIRESFPNL 252
Query: 201 KKYVFSRTEWSMVRRMVGKPRRCSSSFFTEERINLERRRNVIRYLQQGKCGDQTTV--KD 258
K + +R EW +R+++GKPRRCS FF EER+ LE +R IR + +G + ++ KD
Sbjct: 253 KNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYLEEKRMKIRSVYEGSYLNDPSIDLKD 312
Query: 259 IPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEV 318
+P+++P +VVG +V AR+R+P DG+++G++DA +RI FD+ + + D E+
Sbjct: 313 LPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVIPKG--FRIIFDKPDIPPTLVSDTEI 370
Query: 319 LSNDTPETLNRQSFLQMFFASVPN 342
L + + L+ F++ + +P+
Sbjct: 371 LLDGKLDLLSIAYFIEQANSKLPS 394
Score = 216 (81.1 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 58/224 (25%), Positives = 118/224 (52%)
Query: 347 RTGKPEPEAMDANHIDKELEGMLGEYPVELLEQVVRXXXXXXXXXTEVYQIRDMNSEAER 406
R+G P D K E M+G +P++ L +V+ + Q+ ++N++AE
Sbjct: 423 RSGGPLMGPNDERLNGKNAE-MVGNFPLKFLVNLVKLTKLIDIKKGLIRQLNELNADAEI 481
Query: 407 RQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSENMSSQLYALSP 466
+ + + Y +AFQ+KYA I+ LE +N++++ + + + + +S ++S+ + P
Sbjct: 482 QNMTSDKYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDH--HMYFSSNDISTS--NMKP 537
Query: 467 SDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTLSHSSRSAYEVE 526
++Q + +Q+ V N V++ ++LI LTA++LQ++T+ SA +++
Sbjct: 538 EAVRQ---MCSQQAGRFVEHCNQGLNVENVHALTLIQSLTAVLLQVRTMGTQKISAVDLQ 594
Query: 527 VLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSLA 570
L +S+I + P N + F++ + VHM+Q + E G+LA
Sbjct: 595 SLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFHTIML-ESGALA 637
>UNIPROTKB|P30630 [details] [associations]
symbol:lin-9 "Protein lin-9" species:6239 "Caenorhabditis
elegans" [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0006351
GO:GO:0008584 GO:GO:0040035 eggNOG:NOG148048 InterPro:IPR010561
Pfam:PF06584 GO:GO:0045138 GO:GO:0040027 EMBL:Z11115 GO:GO:0070176
EMBL:AF269693 EMBL:AF269694 PIR:A88542 PIR:S15794
RefSeq:NP_001023015.1 RefSeq:NP_001023016.1 UniGene:Cel.19461
ProteinModelPortal:P30630 STRING:P30630 PaxDb:P30630 PRIDE:P30630
EnsemblMetazoa:ZK637.7b.1 EnsemblMetazoa:ZK637.7b.2 GeneID:176256
KEGG:cel:CELE_ZK637.7 UCSC:ZK637.7b.2 CTD:176256 WormBase:ZK637.7a
WormBase:ZK637.7b GeneTree:ENSGT00390000003188 HOGENOM:HOG000018119
InParanoid:P30630 OMA:KPRRCSQ NextBio:891788 Uniprot:P30630
Length = 644
Score = 369 (135.0 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 77/204 (37%), Positives = 127/204 (62%)
Query: 143 SSPDRNLGQRVGMK-LRNLLKLPKAYRFVCYEFFYSNIDRPLFND-NDFITCMKESFPQL 200
+S D + R +K L NLL+ KA ++V EFFYS ID +F + N+F T ++ESFP L
Sbjct: 193 TSEDVSTFMRANIKKLYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATIIRESFPNL 252
Query: 201 KKYVFSRTEWSMVRRMVGKPRRCSSSFFTEERINLERRRNVIRYLQQGKCGDQTTV--KD 258
K + +R EW +R+++GKPRRCS FF EER+ LE +R IR + +G + ++ KD
Sbjct: 253 KNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYLEEKRMKIRSVYEGSYLNDPSIDLKD 312
Query: 259 IPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEV 318
+P+++P +VVG +V AR+R+P DG+++G++DA +RI FD+ + + D E+
Sbjct: 313 LPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVIPKG--FRIIFDKPDIPPTLVSDTEI 370
Query: 319 LSNDTPETLNRQSFLQMFFASVPN 342
L + + L+ F++ + +P+
Sbjct: 371 LLDGKLDLLSIAYFIEQANSKLPS 394
Score = 216 (81.1 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 58/224 (25%), Positives = 118/224 (52%)
Query: 347 RTGKPEPEAMDANHIDKELEGMLGEYPVELLEQVVRXXXXXXXXXTEVYQIRDMNSEAER 406
R+G P D K E M+G +P++ L +V+ + Q+ ++N++AE
Sbjct: 423 RSGGPLMGPNDERLNGKNAE-MVGNFPLKFLVNLVKLTKLIDIKKGLIRQLNELNADAEI 481
Query: 407 RQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSENMSSQLYALSP 466
+ + + Y +AFQ+KYA I+ LE +N++++ + + + + +S ++S+ + P
Sbjct: 482 QNMTSDKYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDH--HMYFSSNDISTS--NMKP 537
Query: 467 SDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDLTALVLQIKTLSHSSRSAYEVE 526
++Q + +Q+ V N V++ ++LI LTA++LQ++T+ SA +++
Sbjct: 538 EAVRQ---MCSQQAGRFVEHCNQGLNVENVHALTLIQSLTAVLLQVRTMGTQKISAVDLQ 594
Query: 527 VLNKTMSDIYKKLSPNNQSVFENCIGVHMEQIKAALAGERGSLA 570
L +S+I + P N + F++ + VHM+Q + E G+LA
Sbjct: 595 SLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFHTIML-ESGALA 637
>FB|FBgn0004372 [details] [associations]
symbol:aly "always early" species:7227 "Drosophila
melanogaster" [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IEP;NAS;IMP] [GO:0048515
"spermatid differentiation" evidence=IMP] [GO:0010468 "regulation
of gene expression" evidence=IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007286 "spermatid development" evidence=TAS]
[GO:0006325 "chromatin organization" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=TAS] [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051039 "positive regulation of
transcription during meiosis" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
GO:GO:0005737 EMBL:AE014296 GO:GO:0007286 GO:GO:0045944
GO:GO:0006352 GO:GO:0000790 InterPro:IPR010561 Pfam:PF06584
GO:GO:0006325 GO:GO:0051039 GO:GO:0007141
GeneTree:ENSGT00390000003188 FlyBase:FBgn0004372 ChiTaRS:ALYREF
RefSeq:NP_524857.3 UniGene:Dm.1781 IntAct:Q9VZW3 MINT:MINT-1746528
STRING:Q9VZW3 EnsemblMetazoa:FBtr0073006 EnsemblMetazoa:FBtr0332086
GeneID:45960 KEGG:dme:Dmel_CG2075 UCSC:CG2075-RA InParanoid:Q9VZW3
OMA:MGKARRF PhylomeDB:Q9VZW3 GenomeRNAi:45960 NextBio:838526
ArrayExpress:Q9VZW3 Bgee:Q9VZW3 Uniprot:Q9VZW3
Length = 568
Score = 256 (95.2 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 107/445 (24%), Positives = 189/445 (42%)
Query: 108 VKFSSSSKLQSTLTETPEKFNDSKLKGSK-KSRVRCSSPDRNLGQRVGMKLRNLLKLPKA 166
+K +SK T+ P + + K K + + P N +G +L N LK +
Sbjct: 78 IKPGVASKRTENFTKKPSNISVDVSEDEKAKEKEKEQDPYSN-DFILGKRLYNFLKYLSS 136
Query: 167 YRFVCYEFFYSNIDRP-LFNDNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSS 225
+R++ EF S +D+P L D + E P L R W +VRR +GK RR S+
Sbjct: 137 HRWIWCEFVDSFLDKPTLTMGYDMKRFIAEYCPLLHSCFMPRRGWQLVRRNMGKARRFSA 196
Query: 226 SFFTEERINLERRRNVIRYLQQGKCGDQTTV---KDIPSEIPIQLVVGTKVTARVRSPQ- 281
+F ER LE +R ++R LQQ K + V IP +P+ L V++ +
Sbjct: 197 AFIELEREELECQRRIVRQLQQHKFNPKENVGYLDQIPKRVPLPLAKDATVSSFLHGNSF 256
Query: 282 DGLFTGVVDAYDTSNNTYRITFDRQGLGTQ-SIPDYEVLSNDTPETLNRQSFLQMFFASV 340
+G+ G V YD + TY + F+R S+PD ++ S++ + ++ +S
Sbjct: 257 EGIVNGTVMGYDPQDYTYLVRFNRNDNAVVLSLPDSQLYSDEETAAVPLSIIMRGNKSSS 316
Query: 341 PNDHTNRTGKPEPEAMDANHIDKEL-EGMLGEYPVELLEQVVRXXXXXXXXXTEVYQ-IR 398
+ +T E KEL E +L V L+ V E ++ +
Sbjct: 317 VISESAKT-----EKFGNKRYTKELLESVLR---VGKLQDVKHKILMDLARMNEDFETFK 368
Query: 399 DMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLSVTSENMS 458
++ S + RR P Q++Y+ ++ L ++N D+ L L L + E
Sbjct: 369 EIGSSSSRRDAKVTPQRENLQRRYSASMITLHRVNADILEPLRILHDYLVEYQKQDEEEE 428
Query: 459 SQLYALSPSDLQQETYIAAQEIVDTVNKKNGNKIVDDQPVVSLITDL-TALVLQIKTLSH 517
S+ S++ Q+ + A++ + T + KI D+ + +L T L L K L
Sbjct: 429 SKR-GRPASEVYQKCRMQAEQDLKTAADEKFLKIESDR-TQEFVRNLHTILYLNGK-LGR 485
Query: 518 SSRSAYEVEVLNKTMSDIYKKLSPN 542
+ S E ++ ++ + + P+
Sbjct: 486 ENSSNLET-IIADLVTHMVDNIQPS 509
>DICTYBASE|DDB_G0286665 [details] [associations]
symbol:lin9 "RmlC-like cupin family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0286665 GenomeReviews:CM000153_GR EMBL:AAFI02000089
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584 RefSeq:XP_637607.1
EnsemblProtists:DDB0232078 GeneID:8625747 KEGG:ddi:DDB_G0286665
InParanoid:Q54LF4 OMA:EVMSADK Uniprot:Q54LF4
Length = 999
Score = 157 (60.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 59/208 (28%), Positives = 93/208 (44%)
Query: 115 KLQSTLTETPEKFNDSKLKGSKKSRVRCSSPDRNLGQRVGMKLRNLLKLPKAYRFVCYEF 174
KL + L++ + ++SK K + S SS + N KL N P + + YE+
Sbjct: 532 KLVNFLSKQKQTKSNSKNKTTSSSSSSSSSSNEN-------KLSN----PGKWAY--YEW 578
Query: 175 FYSNIDRPLFNDNDFITCMKESFPQLKKYVFSRTEWSMVRRMVGKPRRCSSSFFTEERIN 234
FYS++D P + N+F + + FP KK ++TEW+ +R + KPRR S F+ E R
Sbjct: 579 FYSDLDTPFYFYNEFQLLIHQ-FPISKK--LTKTEWNSIRSKMRKPRRLSKQFYDEARSK 635
Query: 235 LERRRNVIRYLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQDGLFTGVVDAYDT 294
L R +RY D I + + + ++ L G V +Y+
Sbjct: 636 LYHTRETVRYSMLNN--DHLKFLQIEPDSRVLYLY-----------ENSLENGKVISYNK 682
Query: 295 SNNTYRITFDRQGLGTQSIPDYEVLSND 322
+ TY I D +PD EV+S D
Sbjct: 683 ISKTYSILSDTNNQ-LIDVPDSEVMSAD 709
Score = 94 (38.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 49/175 (28%), Positives = 79/175 (45%)
Query: 396 QIRDMNSEAERRQLYGEPYDRAFQKKYAGHILRLEKINKDVNTVLASLSVN--LKKLSVT 453
+I +MN +A+ G P + FQK+Y+ +L +E N + T+L N K+ ++
Sbjct: 822 KINEMNEQAKTMVFKGFPIE--FQKQYSELLLGIEYHNSVLQTLLEIFRKNNYTKRNNIA 879
Query: 454 SE---NMSSQLYALSPSDLQQETYIAAQEIVDTVNK---KNGNKIVDD-QPVVSLITDLT 506
E N QL + S DL +E A E + + K KN N D+ Q + LI
Sbjct: 880 EEYQPNDKKQLIS-SLIDLYKEN---ADEYISDLEKQLDKNDNDQSDENQALRELIIGCI 935
Query: 507 ALVLQIKTLSHSSR-SAYEVEVLNKT-MSDIYKKLSPNNQSVFENCIGVHMEQIK 559
+ QIK + S+ +++ L +T ++ I K V N I +E IK
Sbjct: 936 GFIFQIKNQCVNIEFSSEDLDFLFETCLNQIKPKSDSTENLVLFNEIERDVETIK 990
>TAIR|locus:2143666 [details] [associations]
symbol:ALY1 "ALWAYS EARLY 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 EMBL:AC007478 PROSITE:PS51293 EMBL:AJ583498
EMBL:AB493764 IPI:IPI00524271 RefSeq:NP_198113.2 UniGene:At.30796
ProteinModelPortal:Q6A331 SMR:Q6A331 PRIDE:Q6A331
EnsemblPlants:AT5G27610.1 GeneID:832823 KEGG:ath:AT5G27610
TAIR:At5g27610 eggNOG:NOG148048 HOGENOM:HOG000029798
InParanoid:Q6A331 OMA:ITHERDD PhylomeDB:Q6A331
ProtClustDB:CLSN2681354 Genevestigator:Q6A331 InterPro:IPR010561
Pfam:PF06584 Uniprot:Q6A331
Length = 971
Score = 158 (60.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 56/185 (30%), Positives = 85/185 (45%)
Query: 156 KLRNLLKLPKAYRFVCYEFFYSNIDRPLFNDNDFITCMKE-SFPQLKKYVFSRTEWSMVR 214
KL N L P R+ YE+FYS ID P F +F + + +R EWS+++
Sbjct: 540 KLSNCLSYPLVRRWCIYEWFYSAIDYPWFAKMEFTDYLNHVGLGHAPR--LTRVEWSVIK 597
Query: 215 RMVGKPRRCSSSFFTEERINLERRRNVIR--YLQQGKCGDQTTVKDIPSEIPIQLVVGTK 272
+G+PRR S F +ER L+ R +R Y + C T V + +++ L VG +
Sbjct: 598 SSLGRPRRLSQRFLQDERDKLQEYRESVRKHYTELRGCA--TGV--LHTDLARPLSVGNR 653
Query: 273 VTA---RVRSPQDGLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDT----PE 325
V A + R +DG VD +N + FD LG + + D + + + PE
Sbjct: 654 VIAIHPKTREIRDGKIL-TVD-----HNKCNVLFDE--LGVELVMDIDCMPLNPLEYMPE 705
Query: 326 TLNRQ 330
L RQ
Sbjct: 706 GLRRQ 710
Score = 49 (22.3 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 497 PVVS-LITDLTALVLQIKTLSHSSRSAYEVEVLNKTMSDIYKKLSPNNQSVF---ENCIG 552
P+ S LIT A L ++ +S +V L T+ + + P N ++ + C+G
Sbjct: 899 PMPSELITSCVASWLMMQMISKKQYPPADVAQLMDTVVNDLQPRCPQNMPIYREIQTCMG 958
Query: 553 VHMEQIKA 560
+ QI A
Sbjct: 959 LIKTQIMA 966
>TAIR|locus:2089438 [details] [associations]
symbol:ALY3 "ALWAYS EARLY 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293 eggNOG:NOG148048
HOGENOM:HOG000029798 InterPro:IPR010561 Pfam:PF06584 EMBL:AJ583497
EMBL:AP001305 EMBL:BT011578 EMBL:BT012245 EMBL:AK230069
IPI:IPI00846542 RefSeq:NP_001078197.2 UniGene:At.8305
ProteinModelPortal:Q6A332 SMR:Q6A332 IntAct:Q6A332 STRING:Q6A332
PaxDb:Q6A332 PRIDE:Q6A332 EnsemblPlants:AT3G21430.2 GeneID:821697
KEGG:ath:AT3G21430 TAIR:At3g21430 OMA:IQKCTER PhylomeDB:Q6A332
ProtClustDB:CLSN2925526 Genevestigator:Q6A332 Uniprot:Q6A332
Length = 1132
Score = 149 (57.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 59/211 (27%), Positives = 94/211 (44%)
Query: 165 KAYRFVCYEFFYSNIDRPLFNDNDFITCMKE-SFPQLKKYVFSRTEWSMVRRMVGKPRRC 223
+A R+ +E+FYS ID P F +F+ + + + +R EW ++R +GKPRR
Sbjct: 598 RARRWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPR--LTRVEWGVIRSSLGKPRRF 655
Query: 224 SSSFFTEERINLERRRNVIR-YLQQGKCGDQTTVKDIPSEIPIQLVVGTKVTARVRSPQD 282
S F EE+ L R+ +R + + G + + +P ++ L V +V ++
Sbjct: 656 SEQFLKEEKEKLYLYRDSVRKHYDELNTGMR---EGLPMDLARPLNVSQRVICLHPKSRE 712
Query: 283 GLFTGVVDAYDTSNNTYRITFDRQGLGTQSIPDYEVLSNDTPETLNRQSFLQMFFASVPN 342
+ G V D YRI FD LG + + D E + + E N + L +A N
Sbjct: 713 -IHDGNVLTVDHCR--YRIQFDNPELGVEFVKDTECMPLNPLE--NMPASLARHYA-FSN 766
Query: 343 DHTNRTGKPEPEAMDANHIDKELEGMLGEYP 373
H P E M H ++ E ML YP
Sbjct: 767 YHIQN---PIEEKM---H-ERAKESMLEGYP 790
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 396 QIRDMNSEAERRQLYGEPY----DRAFQKKYAGHILRLEKINKDVNTVLASLSVNLKKLS 451
+++ MN E Q G +F+K+YA + +L +IN+ V+ L + L++ +
Sbjct: 874 ELKCMNDEVVESQKDGHNNALKDSESFKKQYAAVLFQLSEINEQVSLAL----LGLRQRN 929
Query: 452 VTSENMS-SQLYALSPS 467
EN+ S + +S S
Sbjct: 930 TYQENVPYSSIRRMSKS 946
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 583 536 0.00093 119 3 11 23 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 607 (65 KB)
Total size of DFA: 277 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.51u 0.11s 49.62t Elapsed: 00:00:02
Total cpu time: 49.51u 0.11s 49.62t Elapsed: 00:00:02
Start: Thu Aug 15 13:59:12 2013 End: Thu Aug 15 13:59:14 2013