BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9278
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5M7F6|WDR92_XENLA WD repeat-containing protein 92 OS=Xenopus laevis GN=wdr92 PE=2
SV=1
Length = 358
Score = 124 bits (311), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/92 (57%), Positives = 70/92 (76%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVE 66
L+KPQII V+KS++Y LFDCKW+PCSAKF+ +G +G+G +Q+YEI G+ +L++ E
Sbjct: 5 LEKPQIIAHVQKSVNYTLFDCKWIPCSAKFVCVGNLARGSGVLQVYEIQQGEAKLLQETE 64
Query: 67 KPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
KP KCGTF AS + +RYLATGDF G L IW
Sbjct: 65 KPKPIKCGTFGASSMQQRYLATGDFGGNLNIW 96
>sp|Q29RZ9|WDR92_BOVIN WD repeat-containing protein 92 OS=Bos taurus GN=WDR92 PE=2 SV=1
Length = 357
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVE 66
+KPQII ++KSL Y +FDCKWMPCSAKF+ +G +GTG IQ+YEI G +L++ +E
Sbjct: 4 FEKPQIISHIQKSLSYTVFDCKWMPCSAKFVTMGNFARGTGVIQLYEIQQGDLKLLREIE 63
Query: 67 KPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
K KCGTF A+ L +RYLATGDF G L IW
Sbjct: 64 KAKPIKCGTFGATSLQQRYLATGDFAGNLHIW 95
>sp|A4QNE6|WDR92_XENTR WD repeat-containing protein 92 OS=Xenopus tropicalis GN=wdr92
PE=2 SV=1
Length = 358
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVE 66
L+KPQII V+K + Y LFDCKW+PCSAKF+ +G +G+G +Q+YEI G+ +L++ E
Sbjct: 5 LEKPQIIAHVQKPVTYTLFDCKWIPCSAKFVCVGNLARGSGVLQVYEIQQGEAKLLQEAE 64
Query: 67 KPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
KP KCGTF AS L +RYLATGDF G L IW
Sbjct: 65 KPKPIKCGTFGASSLQQRYLATGDFGGNLNIW 96
>sp|Q561Y0|WDR92_DANRE WD repeat-containing protein 92 OS=Danio rerio GN=wdr92 PE=2 SV=1
Length = 358
Score = 118 bits (295), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/92 (53%), Positives = 70/92 (76%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVE 66
L+KPQII ++KSL+Y +F+ KW+PCSAKF+ +G +GTG +Q+YEI G+ +LV+ +E
Sbjct: 5 LEKPQIIAHIQKSLNYTVFESKWIPCSAKFVCMGNFARGTGVMQIYEIQHGELQLVREIE 64
Query: 67 KPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
K KCGTF A+ L +R+LATGDF+G L +W
Sbjct: 65 KSKPIKCGTFGATSLQQRHLATGDFDGNLNVW 96
>sp|Q96MX6|WDR92_HUMAN WD repeat-containing protein 92 OS=Homo sapiens GN=WDR92 PE=1
SV=1
Length = 357
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 66/92 (71%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVE 66
+KPQII ++K +Y +FDCKW+PCSAKF+ +G +GTG IQ+YEI G +L++ +E
Sbjct: 4 FEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIE 63
Query: 67 KPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
K KCGTF A+ L +RYLATGDF G L IW
Sbjct: 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95
>sp|Q8BGF3|WDR92_MOUSE WD repeat-containing protein 92 OS=Mus musculus GN=Wdr92 PE=2
SV=1
Length = 357
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/92 (53%), Positives = 66/92 (71%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVE 66
+KPQII ++K L+Y +FD KW+PCSAKF+ +G +GTG IQ+YEI G +L++ +E
Sbjct: 4 FEKPQIIVHIQKGLNYTVFDSKWVPCSAKFVTMGNFARGTGVIQVYEIQRGDLKLLREIE 63
Query: 67 KPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
K KCGTF A+ L +R+LATGDF G L IW
Sbjct: 64 KAKPIKCGTFGAASLQQRFLATGDFGGNLHIW 95
>sp|Q54E33|WDR92_DICDI WD repeat-containing protein 92 homolog OS=Dictyostelium discoideum
GN=wdr92 PE=4 SV=1
Length = 357
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 16 VEKSLDYQLFDCKWMPCSAKFIVLGMKPKG---TGSIQMYEI----NDGQPE--LVKTVE 66
V K L Q + C+W+P S + +G K G G I+++++ G P+ LV E
Sbjct: 21 VTKKLTSQPYSCQWIPTSCSVVTVGKKTSGGISKGDIKIHQLEFDDTSGDPKLNLVYENE 80
Query: 67 KPNAFKCGTF--NASPLSE---RYLATGDFEGKLQIW 98
N F+C +F A+ L + R TGDF G++ W
Sbjct: 81 FTNPFRCLSFFKQANQLQQQDNRKFITGDFNGQISEW 117
>sp|Q96EX3|WDR34_HUMAN WD repeat-containing protein 34 OS=Homo sapiens GN=WDR34 PE=1 SV=2
Length = 536
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 7 LDKPQIICLVEKSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPE---LVK 63
L P + L + SL Y LF +W P ++ G G +Q++++ + L+K
Sbjct: 423 LQAPPLTSL-QLSLKY-LFAVRWSPVRP---LVFAAASGKGDVQLFDLQKSSQKPTVLIK 477
Query: 64 TVEKPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
+ + C FN+ + LA GD +G +++W
Sbjct: 478 QTQDESPVYCLEFNSQ--QTQLLAAGDAQGTVKVW 510
>sp|O45487|EMAL_CAEEL Echinoderm microtubule-associated protein-like elp-1
OS=Caenorhabditis elegans GN=elp-1 PE=2 SV=1
Length = 891
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 14/81 (17%)
Query: 24 LFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTV------EKPNAFKCGTFN 77
+F+CKW P IVL G G + + LVKTV +KP F
Sbjct: 455 VFECKWHPTIRNLIVL----YGKGHFSFFNYDPATGVLVKTVATFEGRDKPKTVLSMCFG 510
Query: 78 ASPLSERYLATGDFEGKLQIW 98
+ + TGD G + IW
Sbjct: 511 END----QVVTGDSNGTISIW 527
>sp|Q0CT27|CCR4_ASPTN Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=ccr4 PE=3 SV=1
Length = 677
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 28 KWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVEKPNA-----FKCGTFNASPLS 82
KW PC+ K + +G G ++ QPE ++E + F CG FN+SP S
Sbjct: 499 KWPPCTDKTAFRFSEAEGGGE------SENQPEPAPSMEYASGDQIPLFMCGDFNSSPGS 552
Query: 83 ERY 85
Y
Sbjct: 553 AAY 555
>sp|Q9VU68|WDR1_DROME Actin-interacting protein 1 OS=Drosophila melanogaster GN=flr
PE=2 SV=1
Length = 608
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 37 IVLGMKPKGTGSIQMYEINDGQPELVKTVEKP------NAFKCGTFNA--SPLSERYLAT 88
IVLG PKG + + +G +++ +E P C A SP S Y+A+
Sbjct: 27 IVLGADPKG----KNFLYTNGNSVIIRNIENPAIADVYTEHSCAVNVAKYSP-SGFYIAS 81
Query: 89 GDFEGKLQIW 98
GD GK++IW
Sbjct: 82 GDASGKIRIW 91
>sp|P90587|WD66_PHYPO 66 kDa stress protein OS=Physarum polycephalum PE=2 SV=1
Length = 601
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 34 AKFIVLGMKPKGTGSIQMYEINDGQPELVKTVEKPNAFKCGTFNASPL-------SERYL 86
K +VLG PKG + G +++ ++ PN +A P S Y+
Sbjct: 18 GKPVVLGGDPKGNN----FLYTCGNAVIIRNIKNPNQADIYYEHAQPATVAKYAPSGFYI 73
Query: 87 ATGDFEGKLQIW 98
A+GD G L+IW
Sbjct: 74 ASGDLSGTLRIW 85
>sp|Q6DIF4|WDR1_XENTR WD repeat-containing protein 1 OS=Xenopus tropicalis GN=wdr1 PE=2
SV=1
Length = 607
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 43 PKGTGSIQMYEINDGQPELVKTVEKPNAFKCGTFNASPL-------SERYLATGDFEGKL 95
PKG + +G+ +++ +E P T +A P+ S Y+A+GD GKL
Sbjct: 27 PKGNN----FLYTNGKSVIIRNIENPAIADIYTEHAHPVVVARYAPSGFYIASGDTSGKL 82
Query: 96 QIW 98
+IW
Sbjct: 83 RIW 85
>sp|Q54WA3|PEX7_DICDI Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum
GN=pex7 PE=3 SV=1
Length = 316
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 18 KSLDYQLFDCKWMPCSAKFIVLGMKPKGTGSIQMYEINDGQPELVKTVEKPNAFKCGTFN 77
K+ D+++ C W + K +V G K +I++++I P+ T+ + + +
Sbjct: 187 KAHDHEILTCDWNKYNDKEVVTGSVDK---TIRIWDIR--YPDRPTTILRGHTYAVRRIK 241
Query: 78 ASPLSERYLATGDFEGKLQIW 98
SP SE LA+ ++ + +W
Sbjct: 242 CSPHSESMLASCSYDMSVIVW 262
>sp|Q6CXX3|HIR1_KLULA Protein HIR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HIR1
PE=3 SV=1
Length = 861
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 66 EKPNAFKCGTFNASPLSERYLATGDFEGKLQIW 98
E+ +++ T + SP S+R LATG +GK++IW
Sbjct: 13 EEHKSYEVYTCDVSPDSQR-LATGGLDGKIRIW 44
>sp|Q5RKI0|WDR1_RAT WD repeat-containing protein 1 OS=Rattus norvegicus GN=Wdr1 PE=1
SV=3
Length = 606
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 38 VLGMKPKGTGSIQMYEINDGQPELVKTVEKPNAFKCGTFNASPL-------SERYLATGD 90
+LG PKG + +G+ +++ ++ P T +A + S Y+A+GD
Sbjct: 22 ILGGDPKGDN----FLYTNGKCVILRNIDNPAVADIYTEHAHQVVVAKYAPSGFYIASGD 77
Query: 91 FEGKLQIW 98
GKL+IW
Sbjct: 78 ISGKLRIW 85
>sp|O88342|WDR1_MOUSE WD repeat-containing protein 1 OS=Mus musculus GN=Wdr1 PE=1 SV=3
Length = 606
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 38 VLGMKPKGTGSIQMYEINDGQPELVKTVEKPNAFKCGTFNASPL-------SERYLATGD 90
+LG PKG + +G+ +++ ++ P T +A + S Y+A+GD
Sbjct: 22 ILGGDPKG----DHFLYTNGKCVILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIASGD 77
Query: 91 FEGKLQIW 98
GKL+IW
Sbjct: 78 ISGKLRIW 85
>sp|O93277|WDR1_CHICK WD repeat-containing protein 1 OS=Gallus gallus GN=WDR1 PE=2 SV=1
Length = 609
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 38 VLGMKPKGTGSIQMYEINDGQPELVKTVEKPNAFKCGTFNASPL-------SERYLATGD 90
++G PKG + +G+ +++ ++ P T +A + S Y+A+GD
Sbjct: 24 IIGGDPKGNN----FLYTNGKCVVIRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIASGD 79
Query: 91 FEGKLQIW 98
GKL+IW
Sbjct: 80 VSGKLRIW 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,452,477
Number of Sequences: 539616
Number of extensions: 1488989
Number of successful extensions: 2650
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2641
Number of HSP's gapped (non-prelim): 19
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)