BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9280
(143 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 144 bits (362), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 91/127 (71%)
Query: 17 NNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAA 76
++G + +LY S FE I+ +K GKN VGL+QLNRPK+LNALCD L+ E+
Sbjct: 8 SSGVDLGTENLYFQSMASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQ 67
Query: 77 AVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVI 136
A++ F++D +V AIVLTG +KAFAAGADIKEM N ++ + L+HWD++T+ KKPVI
Sbjct: 68 ALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVI 127
Query: 137 AAVNGYA 143
AAVNGYA
Sbjct: 128 AAVNGYA 134
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 142 bits (357), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+ A++ F++D +V AIVLTG EK
Sbjct: 1 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 60
Query: 98 AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
AFAAGADIKEM N+T+ L HWD+IT+ KKPVIAAVNGYA
Sbjct: 61 AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 106
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 142 bits (357), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+ A++ F++D +V AIVLTG EK
Sbjct: 3 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 62
Query: 98 AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
AFAAGADIKEM N+T+ L HWD+IT+ KKPVIAAVNGYA
Sbjct: 63 AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 108
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 142 bits (357), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+ A++ F++D +V AIVLTG EK
Sbjct: 4 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 63
Query: 98 AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
AFAAGADIKEM N+T+ L HWD+IT+ KKPVIAAVNGYA
Sbjct: 64 AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 109
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 99.0 bits (245), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
VGL++L+RP +LNAL L +EV A + FD D + AIV+TG+E+AFAAGADI EM+
Sbjct: 19 GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVT 78
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
T + LL WD++T+ +KP++AAV GYA
Sbjct: 79 LTPHQARERNLLSGWDSLTQVRKPIVAAVAGYA 111
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
++ +E ILV++ ++ VG++ LNRP++LNAL +++EV +A + D D + AI++TG
Sbjct: 1 SMTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITG 57
Query: 95 NEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ KAFAAGADIKEM + T+A W + + P IAAV GYA
Sbjct: 58 SAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 106
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
++ +E ILV++ ++ VG++ LNRP++LNAL +++EV +A + D D + AI++TG
Sbjct: 21 SMTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITG 77
Query: 95 NEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ KAFAAGADIKEM + T+A W + + P IAAV GYA
Sbjct: 78 SAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 126
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
+ +E ILV++ ++ VG++ LNRP++LNAL +++EV +A + D D + AI++TG+
Sbjct: 1 MTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGS 57
Query: 96 EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
KAFAAGADIKEM + T+A W + + P IAAV GYA
Sbjct: 58 AKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 105
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%)
Query: 52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
VG+++L RP LNAL +V+E+ AAV+ FD++ V IVLTG +AFAAGADI+EM
Sbjct: 15 VGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKD 74
Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
WD ++ K P+IAAVNG A
Sbjct: 75 DPIRLEWLNQFADWDRLSIVKTPMIAAVNGLA 106
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
V + + V L+ LNRP + NAL +AL+ ++ ++ D+S++ V+TGN + FAAGAD+
Sbjct: 9 VSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADL 68
Query: 106 KEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
EM + AA + + W + KP+IAAVNGYA
Sbjct: 69 NEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYA 106
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
+V +N V V +NRP++ NA+ + + +A +FD+D S + VL GN F AGAD
Sbjct: 11 QVERNGPVTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGNGGTFCAGAD 70
Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+K A +TG + KPVIAAV+GYA
Sbjct: 71 LKAFGTAEANAVHRTGPGPMGPSRMMLSKPVIAAVSGYA 109
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 62/102 (60%), Gaps = 11/102 (10%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE 107
+ V ++ LNRP+ LNA+ L+ + AA+++ ++D V A++LTG +AF+AG D+ E
Sbjct: 6 RQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTE 65
Query: 108 MLNQT--YAANVKTGLLEHWDNITKA----KKPVIAAVNGYA 143
++ Y A+++ ++ + +A +KP++ AVNG A
Sbjct: 66 FGDRKPDYEAHLR-----RYNRVVEALSGLEKPLVVAVNGVA 102
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 30 IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAA 89
+ T+K+E VD + + LNRP +LNAL +++E+ AA + + D V
Sbjct: 7 VDSFDTIKYE---VDG-----HTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWL 58
Query: 90 IVLTGNEKAFAAGADIKEMLNQTYAANVKTGL--LEHWDNITKAK-------KPVIAAVN 140
+V+TG +AF +GAD+KE+ + L + W+ + KPV+ AVN
Sbjct: 59 LVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVN 118
Query: 141 G 141
G
Sbjct: 119 G 119
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
++ + V + LNRP++LNA +AL A A+ D VA ++LTG+ + F+AG D
Sbjct: 9 QIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTD 68
Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKA----KKPVIAAVNG 141
+ EM + N G + + KA KP+I AVNG
Sbjct: 69 LAEMQARITDPNFSEGKF-GFRGLIKALAGFPKPLICAVNG 108
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 33 MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
M T K E++LV+ G VGL+ LNRPK++N+L +V+ +A + ++ D SV A++L
Sbjct: 3 MVTAKNEDVLVNVEG---GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLL 59
Query: 93 TG-NEKAFAAGADI 105
TG E+ AG D+
Sbjct: 60 TGAGERGLCAGGDV 73
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
+ V + LNRP++ NAL +A+++ + A +D SV A+VL + KAF AG D+KEM
Sbjct: 33 ERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEM 92
Query: 109 L---NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
++ Y + + I + PVIA V+G A
Sbjct: 93 RAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIA 130
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
++L RP+ NAL LV E+ A+++ D S AIVLTG AF AGAD+ +A
Sbjct: 34 IELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLS---GDAFA 89
Query: 115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
A+ L+E + + PV+ A+NG A
Sbjct: 90 ADYPDRLIELHKAMDASPMPVVGAINGPA 118
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 17 NNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAA 76
++G + +LY +E++ V K+V VQLNRP NA+ E+
Sbjct: 8 SSGVDLGTENLYFQSMAPDHSYESLRV--TSAQKHVLHVQLNRPNKRNAMNKVFWREMVE 65
Query: 77 AVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT-------------YAANVKTGLLE 123
+ +D+ A+V++G K F AG D+ +M + Y ++ T E
Sbjct: 66 CFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQE 125
Query: 124 HWDNITKAKKPVIAAVNG 141
++ I + KPVIAAV+G
Sbjct: 126 TFNVIERCPKPVIAAVHG 143
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
+ V + LNRP++ NAL AL A+ + D V +++TG + F AG D+KE+
Sbjct: 32 EERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKEL 91
Query: 109 LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ ++ W +T KPVI A+NG A
Sbjct: 92 GGSSALPDIS----PRWPALT---KPVIGAINGAA 119
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML 109
+ V + LNRP++ NAL AL A+ + D V +++TG + F AG D+KE+
Sbjct: 16 ERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELG 75
Query: 110 NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ ++ W +T KPVI A+NG A
Sbjct: 76 GSSALPDIS----PRWPALT---KPVIGAINGAA 102
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGAD 104
V + NV L+ ++RP + NA+ A+ + V A+++ +D V A+V+TG +K+F AGAD
Sbjct: 19 VERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGAD 78
Query: 105 IKEML---NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+K + N +A + + G + + KP IAAVNG A
Sbjct: 79 LKAISRGENLYHAEHPEWGFAGYVHHFI--DKPTIAAVNGTA 118
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
+E+I V K+V VQLNRP+ NA+ A E+ Q+ +DS A+V++G K
Sbjct: 2 YESIQV--TSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGK 59
Query: 98 AFAAGADIKEMLNQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
F +G D+ +M + Y ++ + + + I K KPVIAA++G
Sbjct: 60 MFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHG 116
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
+LV++ G V ++ +NRP NAL +VS+ AAA + D D + A +LTG A
Sbjct: 9 RELLVERDGP---VVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSA 65
Query: 99 FAAGADIKE--MLNQTYA-----ANVKTG-LLEHWDNITKAKKPVIAAVNG 141
+ G D+ + M+ A A + G LL H +T KP+IAAVNG
Sbjct: 66 YCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSH--TLT---KPLIAAVNG 111
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKA 98
++L+ KV + G + L+RP +LNAL A V E+ AA++ + D V +V+ +A
Sbjct: 25 DVLIRKV---RRAGRITLSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRA 81
Query: 99 FAAGADIKEMLNQTYAANVKTGLLEHW-------DNITKAKKPVIAAVNGY 142
F AG DI E+ + A + G + W D I KP+++ G+
Sbjct: 82 FCAGGDIAELHGRGVAGDHAFG-QDFWRVEYRXNDRIAAFPKPIVSLXQGF 131
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 54 LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY 113
++ LNRP SLN++ D L +A Q+ D + A V+TG +AF+AG D + +
Sbjct: 40 IITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSA 99
Query: 114 AANVKTGLLEHWDNIT----KAKKPVIAAVNGYA 143
A+++ + I + + PV+AAVNG A
Sbjct: 100 DADLRAKTIRDGREIVLGMARCRIPVVAAVNGPA 133
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
V + + P+ NAL + EV A+ + ++D SV A+++TG E AF AG ++E+
Sbjct: 12 GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 111 QTYAANVK-----TGLLEHW--DNITKAKKPVIAAVNGYA 143
A V+ L H I + K+PV+AA+NG A
Sbjct: 72 DKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVA 111
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
V + + P+ NAL + EV A+ + ++D SV A+++TG E AF AG ++E+
Sbjct: 12 GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 111 QTYAANVK-----TGLLEHW--DNITKAKKPVIAAVNGYA 143
A V+ L H I + K+PV+AA+NG A
Sbjct: 72 DKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVA 111
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIK 106
+ NV ++ +NRP++ NA+ A+ V A+++ D V A+VLTG +K+F AGAD+K
Sbjct: 15 RRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLK 74
Query: 107 EMLNQT--YAANVK----TGLLEHWDNITKAKKPVIAAVNGYA 143
+ + Y + G + H+ + KP IAAVNG A
Sbjct: 75 AIARRENLYHPDHPEWGFAGYVRHFID-----KPTIAAVNGTA 112
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIK 106
+ NV ++ +NRP++ NA+ A+ V A+++ D V A+VLTG +K+F AGAD+K
Sbjct: 15 RRGNVMVITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLK 74
Query: 107 EMLNQT--YAANVK----TGLLEHWDNITKAKKPVIAAVNGYA 143
+ + Y + G + H+ + KP IAAVNG A
Sbjct: 75 AIARRENLYHPDHPEWGFAGYVRHFID-----KPTIAAVNGTA 112
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
++ + + ++RP + NA+ + E+ AA + + + A+VL G + F+AG D+ E+
Sbjct: 31 DQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPEL 89
Query: 109 --LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
LN A LE D + KP +AAV GYA
Sbjct: 90 RTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYA 126
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 17/105 (16%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM-L 109
V + + P+ NAL + EV A+ + ++D SV A+++TG E AF AG ++E+ L
Sbjct: 12 GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 110 NQTYAANVKTGLLEH-------WDN----ITKAKKPVIAAVNGYA 143
++ A G+ +H W I + K+PV+AA+NG A
Sbjct: 72 DKGVA-----GVRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVA 111
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
++L+RP+ LNA+ ++ E++ ++ + D SV A++LTG +AF +G D+ A
Sbjct: 19 IRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAA 78
Query: 115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ IT KPVIA V+G A
Sbjct: 79 DAANRVV----RAITSLPKPVIAGVHGAA 103
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFA 100
+LVD+ + LV LNRP+ +NA+ ++ + D+ V A+V+TG K F
Sbjct: 25 VLVDR--PRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFC 82
Query: 101 AGAD---------IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+GAD I + T A L E + + +PVIAA+NG A
Sbjct: 83 SGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAA 134
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE 107
+ V L+ +NRP + NA+ A+ +AAA Q D + ++ ++TG F AG D+K
Sbjct: 13 QRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKA 72
Query: 108 MLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
++ A + GL + N+ +KP+IAAV G+A
Sbjct: 73 FVSGE-AVLSERGL--GFTNVPP-RKPIIAAVEGFA 104
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
V ++ L+ P + N+ L ++ AA Q+ D D +V IVLTG AF +GA I
Sbjct: 14 RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAA 73
Query: 109 LNQTYAA---------NVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+T+AA V+ E + PVIAAVNG+A
Sbjct: 74 -AETFAAPRNPDFSASPVQPAAFE-------LRTPVIAAVNGHA 109
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFA 100
+LVD + V + LNRP+S NAL L S A+ D V +++TG + F
Sbjct: 11 LLVDTTDR---VRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFC 67
Query: 101 AGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
AG D+KE+ + T ++ W ++T KPVI A+NG A
Sbjct: 68 AGLDLKELGDTTELPDIS----PKWPDMT---KPVIGAINGAA 103
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGAD 104
+GK G++ LNRPK LNAL + ++ +++++QD I++ G KAF AG D
Sbjct: 10 LGKKGCTGVITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGD 69
Query: 105 IKEMLNQTYAANVKTG---LLEHW---DNITKAKKPVIAAVNG 141
I+ ++++ A K E + + + +KP +A ++G
Sbjct: 70 IR-VISEAEKAKQKIAPVFFREEYXLNNAVGSCQKPYVALIHG 111
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLN 110
V ++ L+ P N L + V A+ + + D SV A+V+ G E++F+AG D E+
Sbjct: 10 VRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQ 69
Query: 111 QTYAANVKTGL---LEHWDNITKAKKPVIAAVNGYA 143
+ + +++ + ++ + + KP IAAV+GYA
Sbjct: 70 LSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYA 105
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
V + LNRP LNA + + +EV A++Q D +V +V+TG +AF AG D+ +
Sbjct: 12 QVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTE 71
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVN 140
+ ++H D + P++ A++
Sbjct: 72 E----------MDHGDVLRSRYAPMMKALH 91
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 54 LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY 113
+V +NRP NAL ++ + A + D D + +LTG F AG D+K +
Sbjct: 32 IVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPP 91
Query: 114 AANVKTGLLE--HWDNITKA---KKPVIAAVNGYA 143
+ K G + D + K KKP+IAAV G A
Sbjct: 92 GDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPA 126
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
K V + LNRP+ LN+ D + +++A ++Q ++D ++ ++LTG + F AG D+ +
Sbjct: 22 EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDR 81
Query: 109 LNQTYAANVKTGL-LEHWDN-----ITKAKKPVIA 137
G+ +E + N + K KPVI
Sbjct: 82 NVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVIC 116
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
+V K V V LNRP + NA+ + + AA +FD D + VL G+ F AGAD
Sbjct: 14 RVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGAD 73
Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+K M G + + KPVIAA++G+A
Sbjct: 74 LKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGHA 112
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
+V +V LN P+ N L + A+ + D V A+VLTG KAF+AGAD+ +
Sbjct: 8 HVAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER 67
Query: 111 QT-------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
T Y ++ L H + KP +AAVNG A
Sbjct: 68 VTELGAEENYRHSLSLXRLFH--RVYTYPKPTVAAVNGPA 105
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEM 108
+ + V +NRP+ NA V+E+ A + D +V+ IVLTG + AF +G D K+
Sbjct: 21 EGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKR 80
Query: 109 LNQTYAAN---VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ Y + +L+ I KPVIA V GYA
Sbjct: 81 GHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYA 118
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI--- 105
+ + + LNRP++ NA L+ E+ AA + +D+ V+ IVL N K F+AG D+
Sbjct: 27 SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGG 86
Query: 106 -----KEMLNQTYAANVKTGLLEH---WDNITKAKKPVIAAVNG 141
K L YA + LE+ W N+ KP IAAV G
Sbjct: 87 GPVPDKLTLEFIYAHESRR-YLEYSLRWRNV---PKPSIAAVQG 126
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
+ ++ +NI VD +V + LNR + N+L AL+ E+ + Q +++++ ++LT
Sbjct: 3 AXLQLQNISVDYA--TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILT 60
Query: 94 G-NEKAFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
G EKAF AGAD+KE N+ + + + + + + +PVIAA+NG A
Sbjct: 61 GAGEKAFCAGADLKERAGXNEEQVRHAVSXIRTTXEXVEQLPQPVIAAINGIA 113
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 57 LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML------N 110
+NRP++ NAL L +A A+ + DQ+ V +VL G E F AG D+K+ + N
Sbjct: 20 INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
A V +L + + KP+I AV G A
Sbjct: 80 AGPAGQVPPFVL--LKSAARLSKPLIIAVKGVA 110
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 64 NALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLE 123
NA + +V + Q ++D ++ +V+ G + F+AGADIKE + T A T L +
Sbjct: 27 NAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQA-TELAQ 85
Query: 124 ----HWDNITKAKKPVIAAVNGYA 143
++ + K KPVIAA++G A
Sbjct: 86 LGQVTFERVEKCSKPVIAAIHGAA 109
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 54 LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN--Q 111
++ +NRPK+ N++ A+ +A A+ + D D+ ++ +LTG +F AG D+K
Sbjct: 27 IITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGEN 86
Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
G E KP+IAAV GYA
Sbjct: 87 VVVEGRGLGFTER-----PPAKPLIAAVEGYA 113
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAF 99
++VD VG +GL NRPK NAL D L++ + + D + A+V+ G F
Sbjct: 17 TLVVDTVGPVLTIGL---NRPKKRNALNDGLMAALKDCLT--DIPDQIRAVVIHGIGDHF 71
Query: 100 AAGADIKEMLNQTYAANVKTGLL--EHW----DNITKAKKPVIAAVNG 141
+AG D+ E+ + + GL+ + W D I + PVIAA+ G
Sbjct: 72 SAGLDLSELRER----DATEGLVHSQTWHRVFDKIQYCRVPVIAALKG 115
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
++ +++L P +NA+ ++ EV +Q+ D +V AIV+ G F AGADI
Sbjct: 30 SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGF-- 86
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
+ + G L D I + +KPV+AA+ G
Sbjct: 87 SAFTPGLALGSLV--DEIQRYQKPVLAAIQG 115
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
++ +++L P +NA+ ++ EV +Q+ D +V AIV+ G F AGADI
Sbjct: 30 SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGF-- 86
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
+ + G L D I + +KPV+AA+ G
Sbjct: 87 SAFTPGLALGSLV--DEIQRYQKPVLAAIQG 115
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
++ +++L P +NA+ ++ EV +Q+ D +V AIV+ G F AGADI
Sbjct: 15 SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGF-- 71
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
+ + G L D I + +KPV+AA+ G
Sbjct: 72 SAFTPGLALGSLV--DEIQRYQKPVLAAIQG 100
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAG-----ADI 105
V ++ NR LNA L + AA+ + + D + IVLTG + F AG AD
Sbjct: 39 GVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADA 98
Query: 106 KEMLNQTYA----ANVKTGLLEHWDN-ITKAKKPVIAAVNG 141
++T A AN+ + E + +T +KPVIAA+NG
Sbjct: 99 AAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAING 139
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 40 NILVDKVGKNKNVGLV---QLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+ LVD G G V LN P + NAL ALVS++ ++ D +V +VL
Sbjct: 6 DALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTG 65
Query: 97 KAFAAGADIKEMLNQTYAANVKTGLLEHWDN-------ITKAKKPVIAAVNGY 142
F AGAD+ E + ++ +E I +++ PVIAA++G+
Sbjct: 66 GTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGH 118
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 30 IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAA 89
+++ +E+I+ + + + +NRP+ NA V+E+ A + DS++
Sbjct: 3 FEWVKQYDYEDIIYETY---NGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGV 59
Query: 90 IVLTG-NEKAFAAGADIKEMLNQTYAAN---VKTGLLEHWDNITKAKKPVIAAVNGYA 143
I+LTG KAF +G D K + Y + +L+ I KPVIA V GYA
Sbjct: 60 IILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMVAGYA 117
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
FE+I +K + + +NRP+ NA V E+ A+ D ++ I+LTG +
Sbjct: 26 FEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGD 83
Query: 97 KAFAAGADIKEMLNQTYAANVKTGLLEHWD------NITKAKKPVIAAVNGYA 143
KAF +G D K + Y + H + I KPV+A V GY+
Sbjct: 84 KAFCSGGDQK--VRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYS 134
>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE
(Crotonase) From Legionella Pneumophila Subsp.
Pneumophila Str. Philadelphia 1
Length = 268
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI---KEM 108
VGL+ +NR NA + L++E+ + D++V IVL N K F+AGAD+ + M
Sbjct: 14 VGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSM 73
Query: 109 LNQTYAANVKTGLL--EHWDNITKAKKPVIAAV 139
N T N++ L+ +I+++ KP IA V
Sbjct: 74 ANFTEEENLEDSLVLGNLMYSISQSPKPTIAMV 106
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
FE+I +K + + +NRP+ NA V E+ A+ D ++ I+LTG +
Sbjct: 22 FEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGD 79
Query: 97 KAFAAGADIKEMLNQTYAANVKTGLLEHWD------NITKAKKPVIAAVNGYA 143
KAF +G D K + Y + H + I KPV+A V GY+
Sbjct: 80 KAFCSGGDQK--VRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYS 130
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 47 GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIK 106
G ++ + LNRP++ NA L+ E+ AA + +D+ V I+L N K F+AG D++
Sbjct: 28 GVADSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLR 87
Query: 107 -----------EMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
E + Q A L W N+ KP IAAV G
Sbjct: 88 GGGEVPEKISLEFIIQHEARRYLDYTL-RWRNV---PKPSIAAVQG 129
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTY 113
+ +NRP+ NA V E A+ D +V I+LTG +KAF AG D K + Y
Sbjct: 40 ITINRPQVRNAFRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCAGGDQK--VRGDY 97
Query: 114 AANVKTGLLEHWD------NITKAKKPVIAAVNGYA 143
+ H + I KPV+A V GY+
Sbjct: 98 GGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYS 133
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
pdb|3JU1|B Chain B, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
Length = 407
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKE 107
K VG+V LN K+LNAL V + + +D +A +VL G+ EKAF AG D++
Sbjct: 49 GKLVGVVTLNVEKALNALDLDXVRAXTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRA 108
Query: 108 MLNQTYAA 115
+ + + AA
Sbjct: 109 LYHASVAA 116
>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa
Length = 261
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
+ +LV+K G+ + +++ P +N+L ++E ++++ + D S+ ++LT
Sbjct: 4 KRVLVEKEGE-AGIAVMKFKNP-PVNSLSLEFLTEFVISLEKLENDKSIRGVILTSERPG 61
Query: 99 -FAAGADIKEML--NQTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
F+AG D+ EM N + A + E W + + +I+A+NG
Sbjct: 62 IFSAGLDLMEMYGRNPAHYAEYWKAVQELWLRLYLSNLTLISAING 107
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
Y + FE ++V + + NRPK NA+ E+ A++ +D S+ V
Sbjct: 19 YFQSXGFETLVVTS---EDGITKIXFNRPKKKNAINTEXYHEIXRALKAASKDDSIIT-V 74
Query: 92 LTGNEKAFAAGADIKEMLN------QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
LTGN +++G D+ + + A N L E KP+IA VNG A
Sbjct: 75 LTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPA 132
>pdb|3HP0|A Chain A, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|B Chain B, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|C Chain C, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|D Chain D, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|E Chain E, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|F Chain F, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
Length = 267
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
S V ++ I KV +V + +RP++ N + D L+ E + Q + S+V +VL
Sbjct: 2 SLVTYQTI---KVRFQASVCYITFHRPEANNTINDTLIEECLQVLNQCE-TSTVTVVVLE 57
Query: 94 GNEKAFAAGADIKEMLNQT----YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
G + F GAD +E+ + A+ + L + W + I+ V G
Sbjct: 58 GLPEVFCFGADFQEIYQEXKRGRKQASSQEPLYDLWXKLQTGPYVTISHVRG 109
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
+V V V L RP LNAL +++ + + + +V A+VL G + F +G D
Sbjct: 20 RVEITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGD 79
Query: 105 IKEMLNQTYAANV 117
+ E++ T + +
Sbjct: 80 VDEIIGATLSXDT 92
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 33 MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
+ V F+N+ V + NRP+ NA+ E++A V++ D D V I++
Sbjct: 26 IRPVDFDNLKTMTYEVTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILV 85
Query: 93 TGNEKAFAAGADI 105
+G + F AG D+
Sbjct: 86 SGRGEGFCAGFDL 98
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 63 LNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY--AANVKTG 120
+NAL A + AA+ D+D V A+V+TGN + F+ G D+K + + A + G
Sbjct: 25 VNALGPAXQQALNAAIDNADRDD-VGALVITGNGRVFSGGFDLKILTSGEVQPAIDXLRG 83
Query: 121 LLEHWDNITKAKKPVIAAVNGYA 143
E + KPV+ A G+A
Sbjct: 84 GFELAYRLLSYPKPVVXACTGHA 106
>pdb|1SG4|A Chain A, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|B Chain B, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|C Chain C, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
Length = 260
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA-FAAGADIKEML 109
V +++ P +N+L ++E+ ++++ + D S ++LT + F+AG D+ EM
Sbjct: 14 GVAVMKFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMC 72
Query: 110 NQTYA--ANVKTGLLEHWDNITKAKKPVIAAVNG 141
++ A A + E W + ++ +++A+NG
Sbjct: 73 GRSPAHYAGYWKAVQELWLRLYQSNLVLVSAING 106
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 57 LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT---Y 113
L+ P LN++ + ++A D+D V +++ G KAF++G E++++T Y
Sbjct: 29 LDSP-GLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSF-ELIDETIGDY 86
Query: 114 AANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
++ + E D N+ KPV++A+ G A
Sbjct: 87 EGRIRI-MREARDLVLNLVNLDKPVVSAIRGPA 118
>pdb|3R6H|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase (Echa3) From
Mycobacterium Marinum
Length = 233
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
+G+++++ K +N L + + A+ D+D+ V A+V+ GN + F+ G D+K + +
Sbjct: 15 IGVIRMDDGK-VNVLGPTMQQALNEAIDAADRDN-VGALVIAGNHRVFSGGFDLKVLTSG 72
Query: 112 T--YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
A ++ G E + KPV+ A G+A
Sbjct: 73 EAKPAIDMLRGGFELSYRLLSYPKPVVIACTGHA 106
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 53 GLVQLN---RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML 109
G+V+L + +S+N ++E+ AV D+SV ++++ + F GADI E +
Sbjct: 16 GIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFV 75
Query: 110 N--QTYAANVKTGLLEH---WDNITKAKKPVIAAVNGYA 143
+ A + G LE + + P +AA+NG A
Sbjct: 76 ENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIA 114
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT-- 112
V L+ P LN++ + ++A D+D +V A+++ G KAF++G +++++T
Sbjct: 33 VVLDSP-GLNSVGPQMHRDLADIWPVIDRDPAVRAVLVRGEGKAFSSGGSF-DLIDETIG 90
Query: 113 -YAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
Y ++ + E D N+ PV++A+ G A
Sbjct: 91 DYQGRIRI-MREARDLVHNMINCDTPVVSAIRGPA 124
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG--- 94
+++IL K G + + +NRP NA V E+ A +D+ + ++LTG
Sbjct: 9 YDDILYYKAG---GIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGP 65
Query: 95 ---NEKAFAAGADIKEMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
+ AF +G D Y + T L D I K VIA V GYA
Sbjct: 66 HSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYA 120
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA-FAAGADIK 106
+N+ + ++ +NR N+L L+ ++ AV D V I++ F AGAD+K
Sbjct: 18 ENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLK 77
Query: 107 E 107
E
Sbjct: 78 E 78
>pdb|3O5Y|A Chain A, The Crystal Structure Of The Gaf Domain Of A Two-Component
Sensor Histidine Kinase From Bacillus Halodurans To
2.45a
pdb|3O5Y|B Chain B, The Crystal Structure Of The Gaf Domain Of A Two-Component
Sensor Histidine Kinase From Bacillus Halodurans To
2.45a
Length = 165
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 4 IFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKV-GKNKNVGLVQLNRPKS 62
++ SAL + +F + + Q + Y +Y++ + ++ILV + KNK VG++ + R +
Sbjct: 61 LYWSALDQRQTIFRSLTDTQD-NFYEKQYLAILDLKSILVIPIYSKNKRVGVLSIGRKQQ 119
Query: 63 LNALCDAL 70
++ D L
Sbjct: 120 IDWSLDDL 127
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-------AFAAGAD--I 105
V NRP+ NA V E+ + V ++LTGN AF +G D I
Sbjct: 70 VAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRI 129
Query: 106 KEMLNQTYAAN--------VKTG---LLEHWDNITKAKKPVIAAVNGYA 143
+ YA+ + G +LE I K VI VNG+A
Sbjct: 130 RGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWA 178
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-------AFAAGAD--I 105
V NRP+ NA V E+ + V ++LTGN AF +G D I
Sbjct: 75 VAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRI 134
Query: 106 KEMLNQTYAAN--------VKTG---LLEHWDNITKAKKPVIAAVNGYA 143
+ YA+ + G +LE I K VI VNG+A
Sbjct: 135 RGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWA 183
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-------AFAAGAD--I 105
V NRP+ NA V E+ + V ++LTGN AF +G D I
Sbjct: 50 VAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRI 109
Query: 106 KEMLNQTYAAN--------VKTG---LLEHWDNITKAKKPVIAAVNGYA 143
+ YA+ + G +LE I K VI VNG+A
Sbjct: 110 RGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWA 158
>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
Length = 263
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 73 EVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWD------ 126
E A +D ++LTG+ A+ A D + + T N + +W+
Sbjct: 55 EFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVT---NPREWDKTYWEGKKVLQ 111
Query: 127 NITKAKKPVIAAVNGYA 143
N+ + PVI+AVNG A
Sbjct: 112 NLLDIEVPVISAVNGAA 128
>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|B Chain B, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|C Chain C, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|E Chain E, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|F Chain F, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|G Chain G, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|H Chain H, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|I Chain I, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|J Chain J, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|K Chain K, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|L Chain L, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5S|A Chain A, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
pdb|2J5S|B Chain B, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
Length = 263
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 73 EVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWD------ 126
E A +D ++LTG+ A+ A D + + T N + +W+
Sbjct: 55 EFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVT---NPREWDKTYWEGKKVLQ 111
Query: 127 NITKAKKPVIAAVNGYA 143
N+ + PVI+AVNG A
Sbjct: 112 NLLDIEVPVISAVNGAA 128
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 53 GLVQLNR--PKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
G+VQ+ S N ++V + Q+ ++LTG F++GA KE L
Sbjct: 12 GVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGAS-KEFLI 70
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ V+ +L+ I + P+IAA+ G++
Sbjct: 71 RKTRGEVE--VLDLSGLILDCEIPIIAAMQGHS 101
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 43 VDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAG 102
V +VG + + +N P +N+L ++ + + ++ + V AIV+TG + F+ G
Sbjct: 10 VMEVGGDGVAVITLINPP--VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 103 ADI-----------KEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVN 140
DI KE + ++ T LLE A+KP +AA++
Sbjct: 68 FDISGFGEMQKGNVKEPKAGYISIDIITDLLE------AARKPSVAAID 110
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
Length = 990
Score = 26.9 bits (58), Expect = 3.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 56 QLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
+L++PK L+A C E+ + FD+D++ A + T
Sbjct: 864 RLDKPKKLSAECAKYWGEIISQQYNFDRDNTEVAYLKT 901
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
Length = 990
Score = 26.9 bits (58), Expect = 3.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 56 QLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
+L++PK L+A C E+ + FD+D++ A + T
Sbjct: 864 RLDKPKKLSAECAKYWGEIISQQYNFDRDNTEVAYLKT 901
>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula
pdb|2Q34|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula, Rhombohedral Crystal Form
Length = 243
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 53 GLVQLNR--PKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
G+VQ+ S N ++V + Q+ ++LTG F++GA + ++
Sbjct: 12 GVVQITXKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEYLIR 71
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+T + +L+ I + P+IAA G++
Sbjct: 72 KTRG---EVEVLDLSGLILDCEIPIIAAXQGHS 101
>pdb|2P51|A Chain A, Crystal Structure Of The S. Pombe Pop2p Deadenylation
Subunit
pdb|3G0Z|A Chain A, Structure Of S. Pombe Pop2p - Zn2+ And Mn2+ Bound Form
pdb|3G10|A Chain A, Structure Of S. Pombe Pop2p - Mg2+ And Mn2+ Bound Form
Length = 333
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 28 YIIKYMSTV-------KFENILVDKVGKNKNVGLVQ---LNRPKSLNALCDALVSEVAAA 77
Y++K M+ + +F IL KN ++ + LN K L + D L
Sbjct: 175 YLLKAMTQIPLPAEYEEFYKILCIYFPKNYDIKYIMKSVLNNSKGLQDIADDLQIHRIGP 234
Query: 78 VQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEH 124
Q D+ + A + + G+ MLNQ Y +L H
Sbjct: 235 QHQAGSDALLTARIFFEIRSRYFDGSIDSRMLNQLYGLGSTGSVLWH 281
>pdb|3U5C|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
pdb|3U5G|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
Length = 255
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 48 KNKNVGLVQLNRPKSLNALCDAL---VSEVAAAVQQFDQDSSVAAIVLTGNE 96
+N+NVG +N+ L + DAL V EV A Q +D S I L +E
Sbjct: 39 ENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDE 90
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.128 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,621,221
Number of Sequences: 62578
Number of extensions: 120614
Number of successful extensions: 526
Number of sequences better than 100.0: 109
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 110
length of query: 143
length of database: 14,973,337
effective HSP length: 89
effective length of query: 54
effective length of database: 9,403,895
effective search space: 507810330
effective search space used: 507810330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)