BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9280
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 2/124 (1%)
Query: 20 SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
SS++ L ++ S F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+ A++
Sbjct: 17 SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74
Query: 80 QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
F+QD +V AIVLTG +KAFAAGADIKEM N+T+ + L HWD+IT+ KKPVIAAV
Sbjct: 75 TFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAV 134
Query: 140 NGYA 143
NGYA
Sbjct: 135 NGYA 138
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 86/113 (76%)
Query: 31 KYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
++ S F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+ A++ F++D +V AI
Sbjct: 26 RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAI 85
Query: 91 VLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
VLTG EKAFAAGADIKEM N+T+ L HWD+IT+ KKPVIAAVNGYA
Sbjct: 86 VLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 138
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 83/112 (74%)
Query: 32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
+ S+ FE I+ K G+N NVGL+QLNRPK+LNALC+ L+ E+ A+Q F++D +V AIV
Sbjct: 27 FASSAAFEYIITAKKGRNSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIV 86
Query: 92 LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
LTG EK FAAGADIKEM + T+ G L HWD +T+ KKPVIAAVNGYA
Sbjct: 87 LTGGEKVFAAGADIKEMQSLTFQNCYSGGFLSHWDQLTRVKKPVIAAVNGYA 138
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 85/112 (75%)
Query: 32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
+ S FE I+ +K GKN VGL+QLNRPK+LNALCD L+ E+ A++ F++D +V AIV
Sbjct: 27 FASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIV 86
Query: 92 LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
LTG +KAFAAGADIKEM N ++ + L+HWD++T+ KKPVIAAVNGYA
Sbjct: 87 LTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYA 138
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 85/112 (75%)
Query: 32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
+ S FE I+ +K GKN VGL+QLNRPK+LNALCD L+ E+ A++ F++D +V AIV
Sbjct: 27 FASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIV 86
Query: 92 LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
LTG +KAFAAGADIKEM N ++ + L+HWD++T+ KKPVIAAVNGYA
Sbjct: 87 LTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQIKKPVIAAVNGYA 138
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 78/105 (74%)
Query: 39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
E I ++KVG+ +NV L++LNRPK+LNALC L++E+A A++ D D SV AIV+TG+E+A
Sbjct: 32 EMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERA 91
Query: 99 FAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
FAAGADIKEM N +A L +W ++ KKPVIAAVNG+A
Sbjct: 92 FAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFA 136
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Query: 13 KHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVS 72
K + SS QA Y K T E K VGLV LNRPKSLNAL D L+S
Sbjct: 3 KQVIKTVSSSQAPKKYFFKQFCTSTTE--------KKGRVGLVTLNRPKSLNALSDGLIS 54
Query: 73 EVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAK 132
E+ +AV+ F +D V +I++TG+EKAFAAGADIKEM T LL W ++TK +
Sbjct: 55 EINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKVTLPDAYNNDLLAQWHDLTKIR 114
Query: 133 KPVIAAVNGYA 143
KP+IAAVNGYA
Sbjct: 115 KPIIAAVNGYA 125
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
+ +E +LV+ G+ VGL+ LNRP++LNAL L+ E+ AA++ FD D +V AIVL G+
Sbjct: 1 MSYETLLVETQGR---VGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGS 57
Query: 96 EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
EKAFAAGADIKEM + L W+++ A+KP+IAAV+G+A
Sbjct: 58 EKAFAAGADIKEMQGLDFVDGYLADFLGGWEHVANARKPMIAAVSGFA 105
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
+ +E ILV++ ++ VG++ LNRP++LNAL +++EV +A + D D + AI++TG+
Sbjct: 1 MTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGS 57
Query: 96 EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
KAFAAGADIKEM + T+A W + + P IAAV GYA
Sbjct: 58 AKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 105
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
+ +E ILV++ ++ VG++ LNRP++LNAL +++EV +A + D D + AI++TG+
Sbjct: 1 MTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGS 57
Query: 96 EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
KAFAAGADIKEM + T+A W + + P IAAV GYA
Sbjct: 58 AKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 105
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
+K++ ILVD + VG++ LNRP++LNAL +++E+ A ++ D D V AI++TG+
Sbjct: 1 MKYDTILVDGY---QRVGIITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGS 57
Query: 96 EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
K FAAGADIKEM + T+ W + + P+IAAV GYA
Sbjct: 58 PKVFAAGADIKEMASLTFTDAFDADFFSAWGKLAAVRTPMIAAVAGYA 105
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG- 94
++ N++++K GK V +V +NRPK+LNAL + E+ + + + DS V A++LTG
Sbjct: 1 MELNNVILEKEGK---VAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGA 57
Query: 95 NEKAFAAGADIKEMLNQTYAANVKTGLLEH--WDNITKAKKPVIAAVNGYA 143
EK+F AGADI EM K G+L + + + +KPVIAAVNG+A
Sbjct: 58 GEKSFVAGADISEMKEMNTIEGRKFGILGNKVFRRLELLEKPVIAAVNGFA 108
>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12)
GN=paaF PE=1 SV=1
Length = 255
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
V + + V L+ LNRP + NAL +AL+ ++ ++ D+S++ V+TGN + FAAGAD+
Sbjct: 6 VSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADL 65
Query: 106 KEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
EM + AA + + W + KP+IAAVNGYA
Sbjct: 66 NEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYA 103
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
++FE I K G N+ + LNRP LNAL L+ E+ AV Q + D + I++TG
Sbjct: 1 MEFETIETKKEG---NLFWITLNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGK 57
Query: 96 EKAFAAGADIKEMLNQTYAANV----KTGLLEHWDNITKAKKPVIAAVNGYA 143
KAF AGADI + NQ A K G E D I KP IA +NGYA
Sbjct: 58 GKAFCAGADITQ-FNQLTPAEAWKFSKKG-REIMDKIEALSKPTIAMINGYA 107
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 11 TSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDAL 70
TS + +Q H ++ MS+ +L +KVGK G++ LNRPK+LNAL +
Sbjct: 7 TSAQRLRSVCRLQRIHGHM---MSSKAGSEVLFEKVGK---AGVITLNRPKALNALTLNM 60
Query: 71 VSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTYAANVKTGLL--EHW-- 125
+ + ++++D+DS +++ G EKAF AG DI+ + A N+ + + E +
Sbjct: 61 IRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLSQVFFREEYIL 120
Query: 126 -DNITKAKKPVIAAVNG 141
+ I +KP +A +NG
Sbjct: 121 NNTIGTYQKPYVALING 137
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIK 106
KN+++ L+ LNRP++ NAL ++ + +Q+ + +S++ ++LTG EKAF AGAD+K
Sbjct: 10 KNEHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLK 69
Query: 107 EMLNQTYAANVKT-GLLEHWDNITKA-KKPVIAAVNGYA 143
E + +++ L++ + A +PVIAA+NG A
Sbjct: 70 ERIKLKEDQVLESVSLIQRTAALLDALPQPVIAAINGSA 108
>sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Rattus norvegicus GN=Ech1 PE=1 SV=2
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 4 IFISALQTSKHLFNN------GSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQL 57
+ + L+ ++ L+ N SS Q A I + +S +E+I V K+V VQL
Sbjct: 14 LLMQQLRGTRQLYFNVSLRSLSSSAQEASKRIPEEVSDHNYESIQV--TSAQKHVLHVQL 71
Query: 58 NRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT----- 112
NRP+ NA+ A E+ Q+ +DS A+V++G K F +G D+ +M +
Sbjct: 72 NRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPG 131
Query: 113 --------YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
Y ++ + + + I K KPVIAA++G
Sbjct: 132 DDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHG 168
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 29 IIKYMSTVKFENILVD-KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSV 87
I++++ T K + D + K G++ LNRPK LNAL ++ ++ ++ ++QD
Sbjct: 21 ILQHLKTCKHTDSAADVLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPET 80
Query: 88 AAIVLTG-NEKAFAAGADIKEMLNQTYAANVKTG--LLEHW--DN-ITKAKKPVIAAVNG 141
I++ G EKAF AG D++ + + A + T E + DN I KKP +A ++G
Sbjct: 81 FLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDG 140
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
V + +V ++ LNRPK LNALC ++S + + +++D SV ++L G +AF AG D+
Sbjct: 9 VEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCAGGDV 68
Query: 106 KEMLNQTYAANVKTGLLEHWDNIT------KAKKPVIAAVNG 141
++ + G D T KP ++ +NG
Sbjct: 69 PPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNG 110
>sp|O35459|ECH1_MOUSE Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus
musculus GN=Ech1 PE=2 SV=1
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 1 MNKIFISALQTSKHLFNN------GSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGL 54
+ + + L+ + L+ N SS Q A + +S +E+I V K+V
Sbjct: 11 LRGLLMQQLRGTSQLYFNISLRSLSSSAQEASKRAPEEVSDHNYESIQV--TSAQKHVLH 68
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT-- 112
VQLNRP+ NA+ A E+ Q+ +DS A+V++G K F +G D+ +M ++
Sbjct: 69 VQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASELMQ 128
Query: 113 -----------YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
Y ++ + + + I K KPVIAA++G
Sbjct: 129 PSGDDAARIAWYLRDLISKYQKTFTVIEKCPKPVIAAIHG 168
>sp|P64014|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis
GN=echA6 PE=1 SV=1
Length = 243
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
++L RP+ NAL LV E+ A+++ D S AIVLTG AF AGAD+ +A
Sbjct: 13 IELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLS---GDAFA 68
Query: 115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
A+ L+E + + PV+ A+NG A
Sbjct: 69 ADYPDRLIELHKAMDASPMPVVGAINGPA 97
>sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1
Length = 243
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 55 VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
++L RP+ NAL LV E+ A+++ D S AIVLTG AF AGAD+ +A
Sbjct: 13 IELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLS---GDAFA 68
Query: 115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
A+ L+E + + PV+ A+NG A
Sbjct: 69 ADYPDRLIELHKAMDASPMPVVGAINGPA 97
>sp|Q8GYN9|MENB_ARATH 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis
thaliana GN=MENB PE=1 SV=2
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-N 95
+F +I+ +K ++ + + +NRP+ NA V E+ A DSSV I+LTG
Sbjct: 73 EFVDIIYEKA-LDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKG 131
Query: 96 EKAFAAGADIKEMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
KAF +G D YA G L D I + KPVIA V GYA
Sbjct: 132 TKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYA 182
>sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 1 MNKIF-ISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNR 59
+N++F I+ ++ F++ ++++ ++ E LV+ GK + +V+LN+
Sbjct: 2 INRLFSINNIKNGSKFFSSSTTVETKQPLVL-------LEKHLVN--GKYTGIQIVKLNK 52
Query: 60 PKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA---- 115
PK LNAL + + V +D + +VLTG KAF+AG D+ ++ +T
Sbjct: 53 PKQLNALTFEMGVDYKKVVDTLAEDKDLKCVVLTGEGKAFSAGGDLDFLIERTKDTPENN 112
Query: 116 -NVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ + I P+I+A+NG A
Sbjct: 113 QRIMERFYRTFLYIRSLPVPIISAINGAA 141
>sp|O69762|HCHL_PSEFL Hydroxycinnamoyl-CoA hydratase-lyase OS=Pseudomonas fluorescens
PE=1 SV=1
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45 KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
KV + V LNRP+ NA+ L E+ ++ +QD + +VLTG +A+ AG D
Sbjct: 12 KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
+KE + A + W + KP IA VNG+
Sbjct: 72 LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117
>sp|Q5RFG0|ECH1_PONAB Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo
abelii GN=ECH1 PE=2 SV=1
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML 109
K+V VQLNRP NA+ E+ + +D+ A+V++G K F AG D+ +M
Sbjct: 65 KHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGVDLMDMA 124
Query: 110 NQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
+ Y ++ T E ++ I K KPVIAAV+G
Sbjct: 125 SDILQPKGDDVARISWYLRDIITRYQETFNVIEKCPKPVIAAVHG 169
>sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 21/125 (16%)
Query: 32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
Y STV +LV+ + + LNRP+ +N++ ++ + A+ Q D+SV +V
Sbjct: 13 YRSTVSL--VLVEH--PRPEIAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVV 68
Query: 92 LTGNEKAFAAGAD---------IKEMLNQTYAANVKTGLLEHWDNI----TKAKKPVIAA 138
LTG + F++GAD ++ + TYA +E D++ + +PVIAA
Sbjct: 69 LTGAGRGFSSGADHKSAGVVPHVENLTRPTYALRS----MELLDDVILMLRRLHQPVIAA 124
Query: 139 VNGYA 143
VNG A
Sbjct: 125 VNGPA 129
>sp|Q2HJ73|HIBCH_BOVIN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus
GN=HIBCH PE=2 SV=1
Length = 386
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 53 GLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQ 111
G++ LNRP+ LN L ++ ++ A +++++QD I++ G EKAF AG DI+ +
Sbjct: 47 GVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRAL--- 103
Query: 112 TYAANVKTGLLEHW--------DNITKAKKPVIAAVNG 141
+ A N +L+ + I +KP IA ++G
Sbjct: 104 SEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHG 141
>sp|O53163|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis
GN=echA12 PE=3 SV=1
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 21/125 (16%)
Query: 32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
Y STV +LV+ + + LNRP+ +N++ ++ + A+ Q D+SV +V
Sbjct: 13 YRSTVSL--VLVEH--PRPEIAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVV 68
Query: 92 LTGNEKAFAAGAD---------IKEMLNQTYAANVKTGLLEHWDNI----TKAKKPVIAA 138
LTG + F+ GAD ++ + TYA +E D++ + +PVIAA
Sbjct: 69 LTGAGRGFSPGADHKSAGVVPHVENLTRPTYALRS----MELLDDVILMLRRLHQPVIAA 124
Query: 139 VNGYA 143
VNG A
Sbjct: 125 VNGPA 129
>sp|O53286|ECH17_MYCTU Probable enoyl-CoA hydratase echA17 OS=Mycobacterium tuberculosis
GN=echA17 PE=3 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+F N++V ++ + ++ L+RP + NA+ + EV AA + + VAA++L G
Sbjct: 3 EFVNVVVSDGSQDAGLAMLLLSRPPT-NAMTRQVYREVVAAANELGRRDDVAAVILYGGH 61
Query: 97 KAFAAGADIKEMLNQT-----YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ F+AG D+ E+ + AA ++ + D + KP +AA+ GYA
Sbjct: 62 EIFSAGDDMPELRTLSAQEADTAARIRQ---QAVDAVAAIPKPTVAAITGYA 110
>sp|A5U753|ECH17_MYCTA Probable enoyl-CoA hydratase echA17 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=echA17 PE=3 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+F N++V ++ + ++ L+RP + NA+ + EV AA + + VAA++L G
Sbjct: 3 EFVNVVVSDGSQDAGLAMLLLSRPPT-NAMTRQVYREVVAAANELGRRDDVAAVILYGGH 61
Query: 97 KAFAAGADIKEMLNQT-----YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ F+AG D+ E+ + AA ++ + D + KP +AA+ GYA
Sbjct: 62 EIFSAGDDMPELRTLSAQEADTAARIRQ---QAVDAVAAIPKPTVAAITGYA 110
>sp|A1KN36|ECH17_MYCBP Probable enoyl-CoA hydratase echA17 OS=Mycobacterium bovis (strain
BCG / Pasteur 1173P2) GN=echA17 PE=3 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+F N++V ++ + ++ L+RP + NA+ + EV AA + + VAA++L G
Sbjct: 3 EFVNVVVSDGSQDAGLAMLLLSRPPT-NAMTRQVYREVVAAANELGRRDDVAAVILYGGH 61
Query: 97 KAFAAGADIKEMLNQT-----YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ F+AG D+ E+ + AA ++ + D + KP +AA+ GYA
Sbjct: 62 EIFSAGDDMPELRTLSAQEADTAARIRQ---QAVDAVAAIPKPTVAAITGYA 110
>sp|Q7TXE1|ECH17_MYCBO Probable enoyl-CoA hydratase echA17 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA17 PE=1 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+F N++V ++ + ++ L+RP + NA+ + EV AA + + VAA++L G
Sbjct: 3 EFVNVVVSDGSQDAGLAMLLLSRPPT-NAMTRQVYREVVAAANELGRRDDVAAVILYGGH 61
Query: 97 KAFAAGADIKEMLNQT-----YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ F+AG D+ E+ + AA ++ + D + KP +AA+ GYA
Sbjct: 62 EIFSAGDDMPELRTLSAQEADTAARIRQ---QAVDAVAAIPKPTVAAITGYA 110
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus
norvegicus GN=Hibch PE=1 SV=2
Length = 385
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 1 MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRP 60
M + F+ LQ+ S I HL + K+ T + +L+++ G G++ LNRP
Sbjct: 1 MGQQFVWRLQSRFSSIRRASVI-LQHLRMSKHTETAE---VLLERRG---CAGVITLNRP 53
Query: 61 KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTYAANVKT 119
K LNAL ++ ++ ++++++D I++ G KAF AG DIK + A +
Sbjct: 54 KLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLS 113
Query: 120 GLL--EHW---DNITKAKKPVIAAVNG 141
L E + + I +KP +A ++G
Sbjct: 114 QDLFREEYILNNAIASCQKPYVALIDG 140
>sp|Q13011|ECH1_HUMAN Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo
sapiens GN=ECH1 PE=1 SV=2
Length = 328
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML 109
K+V VQLNRP NA+ E+ + +D+ A+V++G K F AG D+ +M
Sbjct: 65 KHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMA 124
Query: 110 NQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
+ Y ++ T E ++ I + KPVIAAV+G
Sbjct: 125 SDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHG 169
>sp|Q9TM10|MENB_CYACA 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Cyanidium caldarium
GN=menB PE=3 SV=1
Length = 268
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 33 MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
M T+ ++ + K K + + ++RP+ LNA ++E+ AA +DSS+ ++L
Sbjct: 1 MQTIAIKDFIDIKYIKQDQISEIIISRPQVLNAFRPRTINEIIAAFYDSREDSSIGVVIL 60
Query: 93 TGN-EKAFAAGADIKEMLNQTY---AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+G+ +AF G D K Y +LE I KPVIA V+GYA
Sbjct: 61 SGHGSRAFCVGGDQKIRSKTGYIDEKGRSSLNVLELQRIIRTFPKPVIAKVSGYA 115
>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis
thaliana GN=At2g30650 PE=2 SV=1
Length = 378
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
V + +V ++ NRPK LNAL +VS + +++D SV +VL G +AF+AG DI
Sbjct: 9 VEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDI 68
Query: 106 KEMLNQTYAANVKTGLLEHWDNI--------TKAKKPVIAAVNG 141
++ + G H+ + + +KP ++ +NG
Sbjct: 69 PPIVRDILQGKLIRG--AHYFKVGYTLNYVLSTYRKPQVSILNG 110
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 46 VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
V + +V ++ LNRPK LNAL ++S + F++D SV ++L G+ +AF AG D+
Sbjct: 13 VEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDV 72
Query: 106 KEMLNQTYAANVKTG 120
++ N + G
Sbjct: 73 AAVVRDINQGNWRLG 87
>sp|A5JTM5|CBADH_PSEUC 4-chlorobenzoyl coenzyme A dehalogenase OS=Pseudomonas sp. (strain
CBS-3) PE=1 SV=1
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM-L 109
V + + P+ NAL + EV A+ + ++D SV A+++TG E AF AG ++E+ L
Sbjct: 12 GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 110 NQTYAA---NVKTGLLEHWDN----ITKAKKPVIAAVNGYA 143
++ A + + G L W I + K+PV+AA+NG A
Sbjct: 72 DKGVAGVRDHFRIGAL-WWHQMIHKIIRVKRPVLAAINGVA 111
>sp|P53526|ECH12_MYCLE Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae (strain
TN) GN=echA12 PE=3 SV=1
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIK- 106
V L+ LNRP +N++ L+ + +++ D SV +VLTG + F +GAD K
Sbjct: 27 PRPEVALITLNRPGRMNSMALDLMKSLKQVLKRITYDHSVRVVVLTGAGRGFCSGADQKF 86
Query: 107 -------EMLNQTYAANVKTGLLEH-WDNITKAKKPVIAAVNGYA 143
E L Q A LLE + + +PVIAA+NG A
Sbjct: 87 TAPVPQVEGLTQPVRALRAMELLEEVILALRRLHQPVIAAINGPA 131
>sp|P64018|ECH14_MYCTU Probable enoyl-CoA hydratase echA14 OS=Mycobacterium tuberculosis
GN=echA14 PE=3 SV=1
Length = 256
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
+K+V L+ +N P NA+ D + +++ AA+Q+ + D V A+V+TG KAF AGAD+ +
Sbjct: 12 DKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLSAL 71
>sp|P64019|ECH14_MYCBO Probable enoyl-CoA hydratase echA14 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA14 PE=1 SV=1
Length = 256
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
+K+V L+ +N P NA+ D + +++ AA+Q+ + D V A+V+TG KAF AGAD+ +
Sbjct: 12 DKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLSAL 71
>sp|A0QJH8|ECH17_MYCA1 Probable enoyl-CoA hydratase echA17 OS=Mycobacterium avium (strain
104) GN=echA17 PE=3 SV=1
Length = 257
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+F +++V ++ + ++ ++RP + NAL + EV AA + + VAA++L G
Sbjct: 6 EFVSVVVSDGSRDAGLAMLLVSRPPT-NALSRQVYREVIAAADELGRRDDVAAVILFGGH 64
Query: 97 KAFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ F+AG D+ E+ L A + D + KP +AA+ GYA
Sbjct: 65 EIFSAGDDMPELRTLRGAEAETAARVRRDAIDAVAAIPKPTVAAITGYA 113
>sp|Q73VC7|ECH17_MYCPA Probable enoyl-CoA hydratase echA17 OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=echA17
PE=3 SV=1
Length = 257
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
+F +++V ++ + ++ ++RP + NAL + EV AA + + VAA++L G
Sbjct: 6 EFVSVVVSDGSRDAGLAMLLVSRPPT-NALSRQVYREVIAAADELGRRDDVAAVILFGGH 64
Query: 97 KAFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+ F+AG D+ E+ L A + D + KP +AA+ GYA
Sbjct: 65 EIFSAGDDMPELRTLRGAEAETAARVRRDAIDAVAAIPKPTVAAITGYA 113
>sp|Q50130|ECHA6_MYCLE Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae (strain
TN) GN=echA6 PE=3 SV=1
Length = 247
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQF---DQDSSVAAIVLTGNEKAFAAGADIK 106
+ V ++L RP+ NAL L+ ++ AVQ+ D + S IVLTG F AGAD+
Sbjct: 8 EGVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADLS 67
Query: 107 EMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
+AA+ L+E + PVI A+NG A
Sbjct: 68 ---GDAFAADYPDRLIELHRVMDAVPMPVIGAINGPA 101
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens
GN=HIBCH PE=1 SV=2
Length = 386
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 26 HLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDS 85
HL + K+ E +L++K G G++ LNRPK LNAL ++ ++ +++++QD
Sbjct: 25 HLRMSKHTDAA--EEVLLEKKG---CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDP 79
Query: 86 SVAAIVLTG-NEKAFAAGADIKEMLNQTYAANVKTGLL----EHWDN--ITKAKKPVIAA 138
I++ G KAF AG DI+ ++++ A K + E+ N + +KP +A
Sbjct: 80 ETFLIIIKGAGGKAFCAGGDIR-VISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVAL 138
Query: 139 VNG 141
++G
Sbjct: 139 IHG 141
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis
GN=hibch PE=2 SV=1
Length = 385
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
TVK L+ K G G++ LNRPK+LNAL ++ ++ ++ +++D +++ G
Sbjct: 31 TVKDGGCLLTKAG---CAGVITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKG 87
Query: 95 -NEKAFAAGADIKEMLNQTYAANVKTGLLEHW--------DNITKAKKPVIAAVNG 141
KAF AG DI+ + T A V L + + + I KKP +A ++G
Sbjct: 88 AGGKAFCAGGDIRAV---TDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDG 140
>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1
Length = 272
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 29 IIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVA 88
I++ +K+E + + V +NRP+ NA V+E+ A + D +V+
Sbjct: 7 ILREYDEIKYEFF--------EGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVS 58
Query: 89 AIVLTG-NEKAFAAGADIKEMLNQTYAAN---VKTGLLEHWDNITKAKKPVIAAVNGYA 143
IVLTG +KAF +G D K+ + Y + +L+ I KPVIA V GYA
Sbjct: 59 VIVLTGEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMVRGYA 117
>sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3
Length = 723
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
+ L++L P +NA+ L+ ++ +Q+ D ++ AIV+ G E F+AGADI+
Sbjct: 11 LALIRLRNP-PVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIR----- 64
Query: 112 TYAANVKTGL-LEH-WDNITKAKKPVIAAVNGYA 143
++A GL L H D I + +KPV+AA+ G A
Sbjct: 65 GFSAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMA 98
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 47 GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL-TGNEKAFAAGADI 105
G N+ + + +NRP + NAL + VS++ A+ Q +D V ++ +G + F AGAD+
Sbjct: 41 GPNQGIAEILMNRPSARNALGNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADL 100
Query: 106 KEMLNQTYAANVKTGLLEH-----WDNITKAKKPVIAAVNGYA 143
KE + A + GL I P IAA++G+A
Sbjct: 101 KEREQMSEA---EVGLFVQRLRGLMTEIAAFPAPTIAAMDGFA 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,493,912
Number of Sequences: 539616
Number of extensions: 1567043
Number of successful extensions: 5081
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 4842
Number of HSP's gapped (non-prelim): 278
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)