BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9281
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 90/107 (84%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELAMMCDIIYAGEKA+FGQPEI IGT+PGAGGTQR RAAGKS AME+CLTGN
Sbjct: 137 LGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHV 196
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TAQEAKE G+VSKIFP ++++ E +KL E+I + SPLIV KEAVN
Sbjct: 197 TAQEAKEHGIVSKIFPADQVVGEAVKLGEKIADQSPLIVQMAKEAVN 243
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 93/107 (86%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++
Sbjct: 139 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQ+AK+ G+VSKIFP EKL+EE I+ AE+I +S ++V KE+VN
Sbjct: 199 SAQDAKQAGLVSKIFPVEKLVEEAIQCAEKIASNSKIVVAMAKESVN 245
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 92/107 (85%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++
Sbjct: 139 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQ+AK+ G+VSKIFP E L+EE I+ AE+I +S +IV KE+VN
Sbjct: 199 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 245
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 91/107 (85%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCDIIYAGEKA+FGQPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++
Sbjct: 139 LGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQ+AK+ G+VSKIFP E ++EE I+ AE+I +S ++ KE+VN
Sbjct: 199 SAQDAKQAGLVSKIFPVETVVEEAIQCAEKIASNSKIVTAMAKESVN 245
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 101/147 (68%), Gaps = 21/147 (14%)
Query: 17 DLYRSKNLKFIQC-----LKIWIYL----------------GGGCELAMMCDIIYAGEKA 55
D+ +NL F C LK W +L GGGCELAMMCDIIYAGEKA
Sbjct: 99 DIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKA 158
Query: 56 KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL 115
+F QPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++ +AQ+AK+ G+VSKI P E L
Sbjct: 159 QFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETL 218
Query: 116 LEETIKLAERIGEHSPLIVTQVKEAVN 142
+EE I+ AE+I +S ++V KE+VN
Sbjct: 219 VEEAIQCAEKIASNSKIVVAMAKESVN 245
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 99/147 (67%), Gaps = 21/147 (14%)
Query: 17 DLYRSKNLKFIQC-----LKIWIYL----------------GGGCELAMMCDIIYAGEKA 55
D+ +NL F C LK W +L GGGCELAMMCDIIYAGEKA
Sbjct: 99 DIKEMQNLSFQDCYSSKFLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKA 158
Query: 56 KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL 115
+F QPEI+IGT+PGAGGTQRLTR GKS AME+ LTG++ +AQ+AK+ G+VSKI P E L
Sbjct: 159 QFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETL 218
Query: 116 LEETIKLAERIGEHSPLIVTQVKEAVN 142
+EE I+ AE+I +S +I KE+VN
Sbjct: 219 VEEAIQCAEKIASNSKIIAAMAKESVN 245
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 83/107 (77%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCDII AGEKA FGQPEI +GT+PG GGTQRL RA GKS AME+ LTGN
Sbjct: 126 LGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNL 185
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TA EA++ G+VSK+ P E+LL E K+AE+I +S L V KEAVN
Sbjct: 186 TAVEAEKAGLVSKVVPVEELLTEATKMAEKIASYSQLTVAMAKEAVN 232
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCD I A E AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG
Sbjct: 106 LGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMM 165
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ G+VS++ P++LLEE + AE+I S KEAVN
Sbjct: 166 DAAEAERSGLVSRVVAPDRLLEEALGAAEKIASFSLPAAMMAKEAVN 212
>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12)
GN=paaF PE=1 SV=1
Length = 255
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 78/106 (73%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LG GCELA++CD++ AGE A+FG PEI +G MPGAGGTQRL R+ GKS A ++ L+G
Sbjct: 104 LGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESI 163
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
TAQ+A++ G+VS +FP + LE ++LA ++ HSPL + K+A+
Sbjct: 164 TAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQAL 209
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG
Sbjct: 106 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 165
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ G+VS++ P + LL E A I + S KEAVN
Sbjct: 166 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 212
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG
Sbjct: 106 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 165
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ G+VS++ P + LL E A I + S KEAVN
Sbjct: 166 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 212
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG
Sbjct: 106 LGGGCELAMMCDLLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTI 165
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ G+VS++ + LL E +A I + S KEAVN
Sbjct: 166 DAAEAERSGLVSRVVLADDLLPEAKAVATTISQMSRSATRMAKEAVN 212
>sp|P45361|CRT_CLODI 3-hydroxybutyryl-CoA dehydratase (Fragment) OS=Clostridium
difficile GN=crt PE=3 SV=1
Length = 155
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 74/113 (65%)
Query: 38 GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
GGCELAM CDI A KAKFGQPE+ +G PG GGTQRLTR G + A E+ TG A
Sbjct: 16 GGCELAMACDIRIASAKAKFGQPEVTLGITPGYGGTQRLTRLVGMAKAKELIFTGQVIKA 75
Query: 98 QEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
EA+++G+V+++ P+ L+EE KLA+ I +++ L V KEA+ + +N
Sbjct: 76 DEAEKIGLVNRVVEPDILIEEVEKLAKIIAKNAQLAVRYSKEAIQLGAQTDIN 128
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 75/107 (70%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELA+ CDI A E+A+ G PEI +G PG GGTQRLTR GK A+E+ +TG++
Sbjct: 108 LGGGLELALACDIRIAAEEAQLGLPEINLGIYPGYGGTQRLTRVIGKGRALEMMMTGDRI 167
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
++A++ G+V+++ P L +ET KLAE+I + SP+ + +KE VN
Sbjct: 168 PGKDAEKYGLVNRVVPLANLEQETRKLAEKIAKKSPISLALIKEVVN 214
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 67/107 (62%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCE+AM CDI A A+FGQPE+ +G PG GGTQRL+R G A ++ T
Sbjct: 109 LGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGMAKQLIFTAQNI 168
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA +G+V+K+ P +L+ ++A +I ++P+ V K+A+N
Sbjct: 169 KADEALRIGLVNKVVEPSELMNTAKEIANKIVSNAPVAVKLSKQAIN 215
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELA+ CD+ A E A G PE + +PGAGGTQRL R G+ A E TG +
Sbjct: 109 LGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLIGRGKAKEFIYTGRRV 168
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TA EAKE+G+V + P L+ + +LA I + P+ V Q K A+N
Sbjct: 169 TAHEAKEIGLVEHVTAPCDLMPKAEELAAAISANGPIAVRQAKFAIN 215
>sp|B5XVW2|FADJ_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
(strain 342) GN=fadJ PE=3 SV=1
Length = 714
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C I EK + G PE+ +G +PG+GGTQRL R G S A+++ LTG
Sbjct: 113 LGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGR 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLA 123
Q A++A + G+V ++ P LL+ ++LA
Sbjct: 173 QLRARQALKAGLVDEVVPQAILLQAAVELA 202
>sp|Q39659|MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Cucumis sativus PE=1 SV=1
Length = 725
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%)
Query: 34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
+ LGGG E+AM C + A+ G PE+ +G +PG GGTQRL R G S A+E+ LT
Sbjct: 112 LALGGGLEVAMACHARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSK 171
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH 129
QEA +G+V I PPE+L+ + A I E
Sbjct: 172 PIKGQEAHSLGLVDAIVPPEELINTARRWALEILER 207
>sp|Q9KT58|FADJ_VIBCH Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fadJ PE=3 SV=2
Length = 708
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ CD + E + G PE+++G +PG+GGTQRL R G A+++ LTG
Sbjct: 114 LGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGK 173
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVT 135
Q A++AK++GVV P LL+ +L E G VT
Sbjct: 174 QLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVT 215
>sp|A5F2P2|FADJ_VIBC3 Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=fadJ PE=3 SV=1
Length = 708
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ CD + E + G PE+++G +PG+GGTQRL R G A+++ LTG
Sbjct: 114 LGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGK 173
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVT 135
Q A++AK++GVV P LL+ +L E G VT
Sbjct: 174 QLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVT 215
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAK--FGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + AK G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPQSILLEAAVELAKQ 204
>sp|A6TC19|FADJ_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadJ PE=3 SV=1
Length = 714
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C I EK + G PE+ +G +PG+GGTQRL R G S A+++ LTG
Sbjct: 113 LGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLA 123
Q ++A + G+V ++ P LL+ ++LA
Sbjct: 173 QLRPRQALKAGLVDEVVPQAILLQAAVELA 202
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAK--FGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + AK G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPQSILLEAAVELAKQ 204
>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1
Length = 272
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 118 IGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 177
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P E++ +ET+K + I +HSP + +K A+N DT+GL
Sbjct: 178 NAQEALDMGLVNTVVPLEQVEDETVKWCKDIMQHSPTALRFLKAAMNA-DTDGL 230
>sp|Q5HQC3|MENB_STAEQ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3
SV=1
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 118 IGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 177
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P E++ +ET+K + I +HSP + +K A+N DT+GL
Sbjct: 178 NAQEALDMGLVNTVVPLEQVEDETVKWCKDIMQHSPTALRFLKAAMNA-DTDGL 230
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSSRPLPVRE 216
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSSRPLPVRE 216
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSSRPLPVRE 216
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|P23966|MENB_BACSU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Bacillus subtilis (strain
168) GN=menB PE=1 SV=2
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 117 IGGGHVLHIVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 176
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P E+L EETIK E + E SP + +K A N DT+GL
Sbjct: 177 NAQEALDMGLVNTVVPLEQLEEETIKWCEEMLEKSPTALRFLKAAFNA-DTDGL 229
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVRE 216
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVRE 216
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVRE 216
>sp|Q8NXA0|MENB_STAAW 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MW2) GN=menB PE=3 SV=1
Length = 273
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P EK+ +ET++ + I +HSP + +K A+N DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNA-DTDGL 231
>sp|Q6GAG7|MENB_STAAS 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MSSA476) GN=menB PE=3 SV=1
Length = 273
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P EK+ +ET++ + I +HSP + +K A+N DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNA-DTDGL 231
>sp|Q6GI37|MENB_STAAR 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MRSA252) GN=menB PE=3 SV=1
Length = 273
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P EK+ +ET++ + I +HSP + +K A+N DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNA-DTDGL 231
>sp|Q5HH38|MENB_STAAC 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain COL) GN=menB PE=1 SV=1
Length = 273
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P EK+ +ET++ + I +HSP + +K A+N DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNA-DTDGL 231
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS-PLIVTQ 136
Q A++A ++G+V + P LLE ++LA++ S PL V +
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVRE 216
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEVAVELAKK 204
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEVAVELAKK 204
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEVAVELAKK 204
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 36 LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
LGGG ELA+ C + K G PE+ +G +PG+GGTQRL R G S A+E+ LTG
Sbjct: 113 LGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGK 172
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
Q A++A ++G+V + P LLE ++LA++
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEVAVELAKK 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,852,402
Number of Sequences: 539616
Number of extensions: 2333971
Number of successful extensions: 6187
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5735
Number of HSP's gapped (non-prelim): 380
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)