RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9281
(152 letters)
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC;
2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A*
1dub_A* 1ey3_A* 2hw5_A*
Length = 260
Score = 201 bits (513), Expect = 3e-66
Identities = 75/107 (70%), Positives = 92/107 (85%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++
Sbjct: 109 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 168
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQ+AK+ G+VSKIFP E L+EE I+ AE+I +S +IV KE+VN
Sbjct: 169 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 215
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics
center for infectious DI enoyl COA, actinobacteria,
lyase; 1.50A {Mycobacterium smegmatis}
Length = 263
Score = 200 bits (510), Expect = 9e-66
Identities = 59/107 (55%), Positives = 80/107 (74%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAM+CD++ A + A+FGQPEI +G +PG GGTQRLTRA GK+ AM++CLTG
Sbjct: 112 LGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSL 171
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TA+EA+ +G+VS+I P LL+E + +A+RI S VK+A+N
Sbjct: 172 TAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAIN 218
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics,
center for structural genomics of infec diseases, csgid;
HET: FLC PG4; 1.82A {Bacillus anthracis}
Length = 261
Score = 199 bits (509), Expect = 1e-65
Identities = 46/107 (42%), Positives = 64/107 (59%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG E AM C + +A E AK G PE+ +G +PG GTQRL R GK+ A E+ LT
Sbjct: 110 LGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPI 169
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
T EA + G+V+ +F E L++T+K+A++I SP V E +
Sbjct: 170 TGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLELLQ 216
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics,
NPPSFA, nationa on protein structural and functional
analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Length = 258
Score = 199 bits (508), Expect = 2e-65
Identities = 54/107 (50%), Positives = 77/107 (71%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELA+ CD+I A A+FG PE+ +G MPGAGGTQRLT+ G A+E TG +
Sbjct: 107 LGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARM 166
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+A+EA+++G+V+++ PE L+EET++LA R+ E PL + +KEAV
Sbjct: 167 SAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALRLIKEAVQ 213
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS,
fatty acid metaboli metabolism, lyase, structural
genomics; 1.80A {Mycobacterium tuberculosis} PDB:
3q0j_A* 3pzk_A 3q0g_A*
Length = 278
Score = 199 bits (509), Expect = 2e-65
Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG
Sbjct: 127 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 186
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ G+VS++ P + LL E A I + S KEAVN
Sbjct: 187 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 233
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Length = 277
Score = 198 bits (507), Expect = 4e-65
Identities = 38/107 (35%), Positives = 56/107 (52%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LG G LA+ D +G+ KFG EI+ G +PG GG RLTR G S A E+ +G F
Sbjct: 127 LGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFF 186
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A+EA +G++ + P+ + + + A R E P + K +N
Sbjct: 187 DAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVIN 233
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli}
SCOP: c.14.1.3 PDB: 1ef9_A*
Length = 261
Score = 196 bits (501), Expect = 2e-64
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GG E+ M D+I A + F + +G G LTR AG E+ T +
Sbjct: 108 WGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPI 167
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TAQ A +G+++ + E+L + T+++A I E +PL + +KE +
Sbjct: 168 TAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELR 214
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 2.00A {Mycobacterium abscessus}
Length = 265
Score = 196 bits (500), Expect = 3e-64
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGGCE+ DI + E A FG PE+ G +PGAG RL R + AME+ LTG
Sbjct: 114 LGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPL 173
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
TA EA G+V + P L++ LA+RI + PL V KEA+ + + +
Sbjct: 174 TAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAI 233
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase,
crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens}
PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E*
2vsu_F* 2vsu_E* 2vsu_C*
Length = 276
Score = 194 bits (496), Expect = 2e-63
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GGG + CD+ ++A FG EI G PG ++ + G ++ +TG F
Sbjct: 118 FGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTF 177
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
Q+A EMG+V++ P +L E TI+LA + E +P+++ K
Sbjct: 178 GGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFK 224
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural
genomic for structural genomics of infectious diseases,
csgid; HET: MSE; 1.80A {Bacillus anthracis}
Length = 265
Score = 193 bits (492), Expect = 4e-63
Identities = 48/107 (44%), Positives = 65/107 (60%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG EL++ CD A E A G E + +PGAGGTQRL R G A E+ TG +
Sbjct: 114 LGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRI 173
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQEAKE G+V + P L E+ I++AE+I + P+ V KEA++
Sbjct: 174 SAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAIS 220
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics,
protein structure INI NEW YORK structural genomix
research consortium; 2.00A {Rhodopseudomonas palustris}
Length = 275
Score = 193 bits (493), Expect = 5e-63
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG ELA I A A + PE G G GG+ RL R G + ++ LTG +
Sbjct: 118 IGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVY 177
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+A E G + ++ ++L R+ +++PL V +A+
Sbjct: 178 SAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQALP 224
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics
center for infectious DI niaid; 1.75A {Mycobacterium
marinum}
Length = 278
Score = 193 bits (492), Expect = 8e-63
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ GG E+ DI A E AKFG E P G RL R + A ++ LTG
Sbjct: 127 IAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHI 186
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
TA EAKEMG+V + P + L + +++AE I + PL V + + + + E
Sbjct: 187 TAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQAILRTIRETEGMHENEAFKI 246
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 2.10A {Mycobacterium abscessus}
Length = 265
Score = 192 bits (491), Expect = 8e-63
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
L G ELA+ DI+ A E A F Q E+ G P G T R R AG NAM LT + F
Sbjct: 114 LTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTF 173
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
A EA +G+V +I P + ++ I +A+ I +PL V D
Sbjct: 174 DAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQ 233
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 2.20A {Mycobacterium marinum}
Length = 265
Score = 192 bits (490), Expect = 1e-62
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
L GG ELA+ D+I A + FG PE+ G + G GG RL + AME+ LTG+
Sbjct: 114 LAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNL 173
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
+A+ A +G+V+ + P L+ I LAE+I + PL V K +
Sbjct: 174 SAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLDTRFAQ 233
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 2.09A {Mycobacterium abscessus}
Length = 256
Score = 191 bits (488), Expect = 1e-62
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
L GG EL + CD++ AG AKFG PE+ G + GAGG RL AME+ LTG F
Sbjct: 105 LAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESF 164
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
TA++A + G ++++ + L+ ++LA +I + PL V K + E
Sbjct: 165 TAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATKRIIIESASWAPEEAFAK 224
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics,
seattle structur genomics center for infectious disease,
ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB:
3p85_A* 3qyr_A
Length = 256
Score = 191 bits (488), Expect = 2e-62
Identities = 34/107 (31%), Positives = 57/107 (53%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ GG ELA+ CDI+ A E AKF +G MP G + RL + G A + LTG+
Sbjct: 104 VTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYL 163
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQ+A G+V+++ + LL ++A I ++ V + ++ +
Sbjct: 164 SAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRALLDSYH 210
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural
genomics, PSI-2, protein structure initiative; HET: MSE;
2.40A {Pseudomonas aeruginosa}
Length = 258
Score = 191 bits (488), Expect = 2e-62
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
G EL + DI A +F E++ G P G T R RAAG ++AM LTG++F
Sbjct: 117 WTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEF 176
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGL 149
A EA M +++++ P + L ++ AERI +PL V ++ D L
Sbjct: 177 DADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVRAALQSAFQGRDEGDDAAL 234
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown
function, PSI-2, protein struct initiative; 1.80A
{Streptomyces avermitilis}
Length = 287
Score = 188 bits (481), Expect = 4e-61
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 36 LGGGCELAMMCDIIYA-GEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
GGG E D+ +A E A GQ E ++G +PG GGTQ L G++ A+E+ LT +
Sbjct: 118 RGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADL 177
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD-TEGL 149
F A+ A G +++ P ++L E ++A I ++ K ++ DD EGL
Sbjct: 178 FDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIEAAKRSLPADDLKEGL 233
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein;
2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB:
2a81_A*
Length = 250
Score = 187 bits (478), Expect = 4e-61
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G + A+M D A F PE+ G G L G S EI
Sbjct: 106 IGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAAI-LGFTHGFSTMQEIIYQCQSL 164
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A + +V+++ LL+ I A + + K AVN
Sbjct: 165 DAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRAVN 211
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase,
structural genomics, NPPSFA; 2.16A {Geobacillus
kaustophilus}
Length = 265
Score = 187 bits (477), Expect = 1e-60
Identities = 42/108 (38%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKA-KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
+GGG E+A+ CD+ + G++A K G PE+ +G + G GGTQRL R G S A+++ +TG
Sbjct: 113 VGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGET 172
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
T QEA E+G+V+++FP + E T + A ++ + V+ +K A+
Sbjct: 173 ITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVSNIKLAIM 220
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase,
PSI-2, protein structure initiative; 1.50A {Streptomyces
avermitilis}
Length = 289
Score = 187 bits (477), Expect = 2e-60
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 36 LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
G G E + CD+ +A E A GQPE+ IG PGAG Q LTR G+ A+E LT +
Sbjct: 115 RGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSD 174
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN---IDDTEGL 149
F A A+ G V++ P +L E +A R+ + K A+N + +
Sbjct: 175 FDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALIAAKSAINAISLPAPAEV 232
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A
2q2x_A
Length = 243
Score = 183 bits (467), Expect = 2e-59
Identities = 21/107 (19%), Positives = 45/107 (42%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GGG L + D + +++ + + G P + L G A E+ TG +
Sbjct: 102 FGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENY 161
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+E E G+ + + +L +L ++I + L + +K+ ++
Sbjct: 162 RGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLVALKQHLS 208
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, otholog; 2.15A {Mycobacterium avium subsp}
Length = 274
Score = 184 bits (469), Expect = 2e-59
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ- 94
G G + DI+ A E+A F P + IG + G R++R +S A+ + L G
Sbjct: 122 CGAGMDWVTTTDIVIASEQATFFDPHVSIGLVAG-RELVRVSRVLPRSIALRMALMGKHE 180
Query: 95 -FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGL 149
+AQ A E+G++S+I ++LLE ++A+ + ++PL V + A+ + E
Sbjct: 181 RMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLHEAE 240
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; 2.85A {Thermus thermophilus} SCOP:
c.14.1.3
Length = 253
Score = 183 bits (466), Expect = 3e-59
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ GG LA+ CD++ E+A+ G E+ IG + + L RA G+ A ++ LTG
Sbjct: 106 VAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGEKAAKDLLLTGRLV 164
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A+EAK +G+V++I PP K LEE LAE + +++P + KE +
Sbjct: 165 EAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELLL 211
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase;
2.04A {Synechocystis SP}
Length = 275
Score = 183 bits (467), Expect = 3e-59
Identities = 42/110 (38%), Positives = 63/110 (57%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G G+ L R G+ A EI Q+
Sbjct: 121 IGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQY 180
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
+AQEA+ MG+V+ + P ++L EE I+ A+ I SPL + +K A N D
Sbjct: 181 SAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADC 230
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious
DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium
avium subsp} PDB: 3r9s_A 3r0o_A
Length = 267
Score = 183 bits (466), Expect = 4e-59
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELA+ D++ A E+A+FG PE+ G + AGG R+ + AM + LTG
Sbjct: 113 LGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPL 172
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE-------AVNIDDTEG 148
+A A++ G+++++ +L+ + LA I ++PL V K V + D G
Sbjct: 173 SAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPG 232
Query: 149 LNH 151
+
Sbjct: 233 WDR 235
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding
protein,enoyl-COA hydratase, riken structural
genomics/proteomics initiative, RSGI; 2.20A {Homo
sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Length = 272
Score = 183 bits (466), Expect = 6e-59
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELA+ CDI A AK G E + +PG GGTQRL RA G S A E+ +
Sbjct: 117 LGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVL 176
Query: 96 TAQEAKEMGVVSKIFPPEK----LLEETIKLAERIGEHSPLIVTQVKEAVN 142
+EAK +G++S + + + + LA P+ + K A+N
Sbjct: 177 DGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAIN 227
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily,
lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A
2iex_A
Length = 289
Score = 182 bits (464), Expect = 2e-58
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L MMCD+ A + A FGQ +G+ G G + R G+ A EI Q+
Sbjct: 135 IGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQY 194
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
A++A +MG+V+ + P L +ET++ + ++SP+ + +K A+N D
Sbjct: 195 DAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC 244
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 2.35A {Mycobacterium abscessus}
Length = 290
Score = 180 bits (458), Expect = 1e-57
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPG-AGGTQRLTRAAGKSNAMEICLTGNQ 94
+GGG LA+ CD+ A + A F I G G + L RA G S A +I LTG
Sbjct: 135 IGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRD 194
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ +G+VS+ E LLEE + ERI S + K +
Sbjct: 195 VDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIELTKRTIW 242
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A
{Mycobacterium abscessus} PDB: 3qka_A
Length = 262
Score = 177 bits (452), Expect = 4e-57
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ GG ELA+ CD+ E A G G GGT RL R G S AM++ LTG
Sbjct: 113 VAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPV 172
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
A EA ++G+V+++ + E LA I V +++ + + L++
Sbjct: 173 HANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDN 232
Query: 152 R 152
Sbjct: 233 E 233
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET:
BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A*
1nzy_B*
Length = 269
Score = 177 bits (452), Expect = 6e-57
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GGG +++ D+ + AKF IG + L R G AME+ LT
Sbjct: 112 AGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTL 171
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+EAK+ G+VS+++P ++ E K+A + + KE +
Sbjct: 172 YPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFH 218
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA;
2.9A {Staphylococcus aureus}
Length = 273
Score = 177 bits (452), Expect = 6e-57
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG L ++CD+ A + A FGQ +G+ G+ L R G A EI Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
AQEA +MG+V+ + P EK+ +ET++ + I +HSP + +K A+N DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMN-ADTDGL 231
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics,
structural genomics consortium, SGC, unknown function;
1.90A {Homo sapiens} PDB: 2fw2_A
Length = 261
Score = 176 bits (449), Expect = 1e-56
Identities = 32/107 (29%), Positives = 56/107 (52%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G + +CD+++A EKA F P G P T + G ++A E+ L+G +
Sbjct: 113 IGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKL 172
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TAQEA G+VS++F P +E + + + +P+++ + K V
Sbjct: 173 TAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVR 219
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas
campestris PV} PDB: 3m6m_A
Length = 305
Score = 177 bits (451), Expect = 2e-56
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG E A+ C I A E G PE++ PG G + + A +I L GN +
Sbjct: 152 LGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLY 211
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+A++ MG+V ++ P + + ++ R + +P +++
Sbjct: 212 SAEQLLGMGLVDRVVPRGQGVAAVEQVI-RESKRTPHAWAAMQQVRE 257
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS;
acetyltransferase, structural genomics, structural
genomics consortium, SGC, unknown function; 2.28A {Homo
sapiens} SCOP: c.14.1.3
Length = 291
Score = 177 bits (450), Expect = 2e-56
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G + +CD+++A EKA F P G P + + GK++A E+ + G +
Sbjct: 131 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 190
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TA+EA G+VS++F +E + + + ++P+++ + K V
Sbjct: 191 TAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVR 237
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET:
CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Length = 260
Score = 175 bits (446), Expect = 4e-56
Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 2/109 (1%)
Query: 36 LGGGCELAMMCDIIYAGEKAKF--GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
GGC +A+ CD + ++ G E +G + L G A G
Sbjct: 109 PAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGL 168
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
F EA ++G+V ++ P E++ + + K +
Sbjct: 169 LFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMR 217
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP:
c.14.1.3 PDB: 2vre_A
Length = 275
Score = 175 bits (447), Expect = 4e-56
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAG-KSNAMEICLTGNQ 94
+GGG +L CDI Y + A F E+ +G G QRL + G +S E+ T +
Sbjct: 119 IGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARK 178
Query: 95 FTAQEAKEMGVVSKIFP-PEKLLEETIKLAERIGEHSPLIVTQVKEAVN--IDDT--EGL 149
A EA + G+VS++FP + +L LA I SP+ V K + D + E L
Sbjct: 179 MMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESL 238
Query: 150 NH 151
++
Sbjct: 239 DY 240
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty
acid metabolism, transit peptide, lipid Met crontonase,
mitochondrion, CAsp; 2.3A {Homo sapiens}
Length = 287
Score = 175 bits (445), Expect = 1e-55
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GC+L CDI A +K+ F P + +G G L RA + A+E+ TG
Sbjct: 138 TAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPI 196
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQEA G++SK+ P +L EET+++A +I S +V+ K
Sbjct: 197 SAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFY 243
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid; 2.45A {Mycobacterium avium subsp}
Length = 276
Score = 174 bits (443), Expect = 2e-55
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G GC L + DI+Y E A P + +G + GG A E LTG +
Sbjct: 134 VGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRI 193
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+AQ A E+G+ + + + E I A++I E V K +N
Sbjct: 194 SAQRAVELGLANHVAD--DPVAEAIACAKKILELPQQAVESTKRVLN 238
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald
biostructures, structu genomics; 2.20A {Mycobacterium
marinum}
Length = 256
Score = 173 bits (440), Expect = 3e-55
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G + D+ + A+ P +G P A + L + G+ NA + ++
Sbjct: 111 VGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWI 170
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A+EA MG+V +I PE+LL E + AE + + VK +
Sbjct: 171 DAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLMAVKHTMV 217
>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle
ST genomics center for infectious disease, lyase; 1.80A
{Mycobacterium thermoresistibile} PDB: 3ome_A
Length = 279
Score = 173 bits (441), Expect = 3e-55
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ GG L CD+I A E A F P +++ G T G A EI TG
Sbjct: 129 ISGGLLLCWPCDLIIAAEDALFSDPVVLMDI--GGVEYHGHTWELGPRKAKEILFTGRAM 186
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID-DTEGL 149
TA+E + G+V+++ P ++L ET LA I + P + Q K AVN D +G
Sbjct: 187 TAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVNQTLDVQGF 241
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism,
lyase, structural genomics; HET: PGE; 2.30A
{Mycobacterium tuberculosis}
Length = 264
Score = 170 bits (433), Expect = 4e-54
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G +LAM CD+ A F P G +RL+ G A + L+ +
Sbjct: 119 IGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKL 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT--EGL 149
TA+ A G+ ++I L + A I +PL + K +N D E
Sbjct: 179 TAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQHAKRVLNDDGAIEEAW 230
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura
genomics, seattle structural genomics center for
infectious lyase; 1.75A {Mycobacterium marinum M}
Length = 233
Score = 168 bits (427), Expect = 1e-53
Identities = 18/115 (15%), Positives = 31/115 (26%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ G L D A E+ IG + L S + F
Sbjct: 107 IAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTF 166
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
+ A G + +I PE +L + A + K + + +
Sbjct: 167 FGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHNATKLRARAEALKAIR 221
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A
{Streptomyces toyocaensis} PDB: 2pg8_A*
Length = 440
Score = 173 bits (440), Expect = 2e-53
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+GGG +L ++ D + A A F P G +PG RL R AG + ++ L G +
Sbjct: 296 IGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPG-AANLRLGRFAGPRVSRQVILEGRRI 354
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A+E + +V ++ P++L + R+ + L ++ +
Sbjct: 355 WAKEPEARLLVDEVVEPDELDAAIERSLTRLDGDAVLANRRMLNLAD 401
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus}
Length = 265
Score = 165 bits (421), Expect = 3e-52
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G LA+ DI E+ ++ P++ G P A L R G + A E+ LTG F
Sbjct: 110 IGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASF 169
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH-SPLIVTQVKEAVNIDDTEGLNH 151
+AQ A E G+ ++ P K+L +++A I + +P K + G++
Sbjct: 170 SAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSA 226
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics,
PSI-2, protein structure initiative; 2.50A {Pseudomonas
syringae PV}
Length = 232
Score = 164 bits (417), Expect = 5e-52
Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
+ G L + D G E+ IG G + KS +
Sbjct: 106 VAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEM 165
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
F + A G + K+ E+L + +A ++ + + + K V
Sbjct: 166 FDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVR 213
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A
{Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Length = 257
Score = 164 bits (418), Expect = 7e-52
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQ-PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
+ E+ +M DI+ A E A F P G +PG G G + LTG +
Sbjct: 119 VTNAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQE 178
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A+ A + G V+++ ++LL +LA I E L ++ +
Sbjct: 179 LDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLT 226
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural
genomics center for infectious lyase; 1.55A
{Mycobacterium smegmatis}
Length = 286
Score = 164 bits (417), Expect = 2e-51
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GC+L MCD+ A A+F I +G G L+R G+ A E+ +TG
Sbjct: 131 TAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVA-LSRNVGRKAAFEMLVTGEFV 189
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+A +AK +G+V+++ P+ L +E + +I V K
Sbjct: 190 SADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVAMGKALFY 236
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase,
lyase, crotonase, biocatalysis, beta-diketone; 1.46A
{Anabaena SP} PDB: 2j5s_A* 2j5g_D
Length = 263
Score = 163 bits (414), Expect = 3e-51
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 38 GGCELAMMCDIIYAGEKAKF-GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
E + DII A E F P + G +PG G A G T + T
Sbjct: 130 LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLT 189
Query: 97 AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
AQ+A E+ VV ++ P KL+E ++A + + L + + A+
Sbjct: 190 AQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALT 235
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald
biostructures, structu genomics; 1.60A {Mycobacterium
marinum M} PDB: 3q1t_A
Length = 272
Score = 162 bits (413), Expect = 5e-51
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G +A++ DI A AK +G G G + A LT
Sbjct: 119 VGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETL 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+ +EA+ +G+VS +++L +LAE + + + + K ++N
Sbjct: 179 SGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIRWTKRSLN 225
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2,
protein structure initiative, EN hydratase; 1.76A
{Bordetella parapertussis}
Length = 254
Score = 161 bits (410), Expect = 9e-51
Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 3/107 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
G G +L C Y +A F P + G + G T+R G A+ I + F
Sbjct: 110 FGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVLG---TRRFRDIVGADQALSILGSARAF 166
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ +G V + AE P + +
Sbjct: 167 DADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRATLHRVLR 213
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural
genomics, riken S genomics/proteomics initiative, RSGI;
1.80A {Thermus thermophilus} SCOP: c.14.1.3
Length = 264
Score = 161 bits (410), Expect = 1e-50
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G LA+ DI G+ + + +G G G + A L
Sbjct: 116 VGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPL 175
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
T +EA+ +G+V+ EK+ E+ +++AER+ + + K A+N
Sbjct: 176 TGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALHHTKHALN 222
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038,
NPPSFA, national project on prote structural and
functional analyses; 2.00A {Geobacillus kaustophilus}
Length = 257
Score = 160 bits (407), Expect = 3e-50
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
G G LA+ CD EKA F I +G +P AG L R G++ A+E+ + G +
Sbjct: 106 AGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKV 165
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
TA+EA +G+ +K+ P EE + AER+ + +K +
Sbjct: 166 TAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIGLIKRLLR 212
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2;
2.00A {Acinetobacter baumannii}
Length = 266
Score = 158 bits (402), Expect = 2e-49
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G + + D+++A A F P + +G P G +Q L + AG A E+ T +F
Sbjct: 111 IGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKF 170
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI---DDTEGLNH 151
A+ A + G+V++I A+ + + Q K + E ++H
Sbjct: 171 NAETALQAGLVNEIVED--AYATAQATAQHLTALPLASLKQTKALMKHDLDQIIECIDH 227
>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics,
PSI-2, protein structure initiative; 1.70A {Bacillus
halodurans}
Length = 263
Score = 157 bits (400), Expect = 4e-49
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GGG + + CD A +AKF + +G P G + L R G M + L G F
Sbjct: 113 YGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLF 172
Query: 96 TAQEAKEMGVVSKIFP-PEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
T++EA +G++ +I ++L E + + E + K+ +
Sbjct: 173 TSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIAATKKLLK 220
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily,
lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A
1rjm_A* 1rjn_A* 1q52_A 1q51_A
Length = 334
Score = 157 bits (399), Expect = 3e-48
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 36 LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
GGG L ++CD+ A E A+F Q + +G+ G G+ L R G+ A EI G
Sbjct: 179 AGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRT 238
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT 146
+TA++ +MG V+ + +L ++ A I SP +K A N+ D
Sbjct: 239 YTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDD 290
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics;
1.58A {Legionella pneumophila subsp}
Length = 268
Score = 155 bits (394), Expect = 3e-48
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GGG LA CDI A A+F E+ +G +P A + + RA G+ A + ++ F
Sbjct: 111 FGGGAGLAAACDIAIASTSARFCFSEVKLGLIP-AVISPYVVRAIGERAAKMLFMSAEVF 169
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A A + +V P + LLE T+K A +I ++P V K+
Sbjct: 170 DATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVKNSKQLAQ 216
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase
superfamily, dimer of trimers, PSI-2, NYSGXRC,
structural genomics; 2.32A {Ruegeria pomeroyi}
Length = 263
Score = 152 bits (385), Expect = 7e-47
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
G +L CD+ YA A+F P + G ++R G+ E+ LTG +
Sbjct: 116 TAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTTPAV-AVSRVIGRRAVTEMALTGATY 174
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A A G++++I P L LA + + + + E +N
Sbjct: 175 DADWALAAGLINRILPEAALATHVADLAGALAARNQAPLRRGLETLN 221
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Length = 298
Score = 152 bits (386), Expect = 1e-46
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G G A+MCD+ +A AKF G + G + L R + A+++ L+G F
Sbjct: 142 VGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTF 201
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH-SPLIVTQVKEAVN 142
A+EA ++G+V ++ PE+L+ ++ AE I + SP + +K V
Sbjct: 202 LAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKRQVY 249
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase
superfamily, lyase; 1.85A {Thermus thermophilus HB8}
PDB: 3hrx_A
Length = 254
Score = 150 bits (381), Expect = 2e-46
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
G G LA+ D+ A A F + IG +P +G + L R G + A E+ L +
Sbjct: 103 AGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRL 162
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+A+EA +G+V ++ P EKL+EE + LA+ + + K+ +
Sbjct: 163 SAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYALTKKLLL 209
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center
for infectious disease, S coenzyme A, tuberculosis;
2.05A {Mycobacterium avium}
Length = 255
Score = 149 bits (379), Expect = 4e-46
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G GC LA+ CD++ A + F +G MP G + L G++ + +T +
Sbjct: 104 VGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKI 163
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+A A E G++S I ++ + + L K A+
Sbjct: 164 SAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFGWTKRALA 210
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid
metabolism, STR genomics, structural genomics
consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Length = 280
Score = 143 bits (362), Expect = 3e-43
Identities = 27/114 (23%), Positives = 49/114 (42%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+G L + D +YA ++A F P +G P + + + A E+ + G +
Sbjct: 133 VGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKL 192
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
TA EA G+V+++FP +E + + P + KE + + E L
Sbjct: 193 TAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKL 246
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural
genomics, PSI-2, protein ST initiative; 2.05A
{Streptomyces coelicolor A3}
Length = 279
Score = 139 bits (352), Expect = 1e-41
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPG-AGGTQRLTRAAGKSNAMEICLTGNQ 94
G G LA+ D A +F +G G G L R G +A + + G+
Sbjct: 125 AGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDT 184
Query: 95 FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A EA+ +G++S++ + E LA R+ + L Q K +
Sbjct: 185 VRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHAQTKALLT 232
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu
genomics, seattle structural genomics center for
infectious lyase; 1.75A {Mycobacterium smegmatis} PDB:
3njb_A
Length = 333
Score = 140 bits (355), Expect = 1e-41
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
+ GG ++A+ D + A AK G P + + +P AG G A + TG+
Sbjct: 169 VAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCI 225
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
T +A E G+ + P L T +L ERI + K A N
Sbjct: 226 TGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLIMAKLACN 272
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving,
burkholderia xenovorans LB400 crotonase; 1.50A
{Burkholderia xenovorans}
Length = 556
Score = 143 bits (362), Expect = 3e-41
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Query: 36 LGGGCELAMMCDIIYA--GEKAKFGQPEI-IIGTMPGAGGTQRLT--RAAGKSNAMEICL 90
GGG ELA+ CD IY + PE+ ++G +PG GG R+T R A C
Sbjct: 141 AGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCT 200
Query: 91 TGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+ AK +V ++ P + + A + S +
Sbjct: 201 VVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHAQGVPLT 252
Score = 59.6 bits (144), Expect = 2e-11
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 10/128 (7%)
Query: 35 YLGGGCELAMMCDIIY-------AGEKAKFGQPEIIIGTMPGAGGTQRL-TRAAGKSNAM 86
+ G ELA D Y E+ E+ G P RL R ++ +
Sbjct: 388 FAGTFAELAFAADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPL 447
Query: 87 E--ICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
+ G EA+ +G+V+ +E E SP +T ++ + +
Sbjct: 448 DAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDALTGLEANLRFN 507
Query: 145 DTEGLNHR 152
E + R
Sbjct: 508 GPETMETR 515
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold,
inter-trimer contacts; 2.10A {Saccharomyces cerevisiae}
SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Length = 280
Score = 134 bits (338), Expect = 1e-39
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 26 FIQCLKIWIY------LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTR 78
FI+ K+ I +G L +CDI+Y+ +K P +G + G T L
Sbjct: 108 FIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPL 167
Query: 79 AAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETI------KLAERIGEHSPL 132
G + E + F E G +SK F E +L E++
Sbjct: 168 KFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLP 227
Query: 133 IVTQVKEAVNIDDTEGLNH 151
+K+ + + + N
Sbjct: 228 SCLGMKKLLKSNHIDAFNK 246
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH;
polyketide synthase, enoyl COA hydratase,isomerase;
2.32A {Bacillus subtilis}
Length = 267
Score = 131 bits (331), Expect = 9e-39
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GG DI A + A F E++ G P A L R G+ A + L
Sbjct: 112 NAGGLGFVSATDIAIADQTASFSLSELLFGLYP-ACVLPFLIRRIGRQKAHYMTLMTKPI 170
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+ QEA E G++ +L K R+ + + K+ ++
Sbjct: 171 SVQEASEWGLIDAFDAESDVLLR--KHLLRLRRLNKKGIAHYKQFMS 215
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for
infectious disease, S non-pathogenic mycobacterium
species, ortholog; 1.50A {Mycobacterium avium}
Length = 267
Score = 118 bits (299), Expect = 6e-34
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
GG L CDI AG ++ F E IG P L A LTG +F
Sbjct: 120 RAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLL-PKLSARAAARYYLTGEKF 178
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
A+ A+E+G+++ E L +L +G SP + K
Sbjct: 179 DARRAEEIGLITM--AAEDLDAAIDQLVTDVGRGSPQGLAASKALTT 223
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase,
peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A
{Arabidopsis thaliana}
Length = 725
Score = 113 bits (286), Expect = 3e-30
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELAM C + A+ G PE+ +G +PG GGTQRL R G + A+E+ LT
Sbjct: 114 LGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPV 173
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
A+E +G++ + PP +L+ + A I
Sbjct: 174 KAEEGHSLGLIDAVVPPAELVTTARRWALDIVG 206
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric
complex, lyase, oxidoreductase/transferase complex,
lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP:
a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A*
1wdm_A* 2d3t_A*
Length = 715
Score = 111 bits (281), Expect = 1e-29
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG E+ + D + AK G PE+ +G PG GGT RL R G NA+E +G +
Sbjct: 115 LGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKEN 174
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
A++A ++ V + +KL + L +R
Sbjct: 175 RAEDALKVSAVDAVVTADKLGAAALDLIKRA 205
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway,
oxidoreductase, lipid metabolism, LY isomerase,
peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A
{Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A*
2x58_A*
Length = 742
Score = 110 bits (277), Expect = 4e-29
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
LGGG ELA+ C A KA+ G PE+ +G +PGA GTQ L R G A+++ +G
Sbjct: 118 LGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYL 177
Query: 96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
+A EA +G++ + + +EE IK A++I +
Sbjct: 178 SADEALRLGILDAVVKSD-PVEEAIKFAQKIID 209
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure,
structural genomics, PSI-2, protein ST initiative; HET:
MSE; 2.30A {Shewanella oneidensis}
Length = 407
Score = 51.3 bits (123), Expect = 1e-08
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
I +GGG L E ++ PE+ IG P GG+ L R GK + + LT
Sbjct: 152 IVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKM-GLFLGLTAY 210
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
A +A +G+ + +A SP + Q + +
Sbjct: 211 HMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTM 258
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A,
beta-hydroxyisobutyryl acid, querceti structural
genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Length = 363
Score = 50.4 bits (121), Expect = 3e-08
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
I +GGG L++ A EK F PE IG P GG L R GK + LTG
Sbjct: 112 ITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGF 170
Query: 94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
+ ++ G+ + EKL L E + + +
Sbjct: 171 RLKGRDVYRAGIATHFVDSEKLAM----LEEDLLALKSPSKENIASVLE 215
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.4 bits (94), Expect = 1e-04
Identities = 37/214 (17%), Positives = 57/214 (26%), Gaps = 87/214 (40%)
Query: 13 YEQKDLYRSKNLKF-IQCL------KIWIYLGG--GCEL-----AMMCD----------- 47
+ + D + F I + + I+ GG G + AM+ +
Sbjct: 1646 WNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEK 1705
Query: 48 -----------IIYAGEKAK-----FGQP-----EIII-------GTMPG----AG---G 72
+ EK F QP E G +P AG G
Sbjct: 1706 IFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLG 1765
Query: 73 ----------------TQRLTRAAGK--SNAMEICLTGNQFTAQEAKEMGVVSKIFPPEK 114
+ G A+ G A G V+ F E
Sbjct: 1766 EYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEA 1825
Query: 115 LLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG 148
L + ER+G+ + +V E VN + E
Sbjct: 1826 LQY----VVERVGKRTGWLV----EIVN-YNVEN 1850
Score = 26.9 bits (59), Expect = 3.0
Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 20/99 (20%)
Query: 60 PEIIIGTMPGA-GGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEM------GVVS-KIFP 111
P + + GA G +Q L A A+ + F K + GV + +P
Sbjct: 260 PGELRSYLKGATGHSQGLVTAV----AIAETDSWESFFVSVRKAITVLFFIGVRCYEAYP 315
Query: 112 PEKLLEETIKLAERIGEHSP---LIVT-----QVKEAVN 142
L ++ + E P L ++ QV++ VN
Sbjct: 316 NTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVN 354
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex,
alpha / beta motif, protease, membr protein stomatin,
hydrolase-protein binding complex; 2.25A {Pyrococcus
horikoshii} PDB: 3bpp_A 2deo_A
Length = 230
Score = 32.7 bits (74), Expect = 0.034
Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 17/121 (14%)
Query: 37 GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGT-----------QRLTRAAGKSN- 84
G +A+ +I G I+G + A +S
Sbjct: 83 SAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGR 142
Query: 85 ----AMEICLTGNQFTAQEAKEMGVVSKIFP-PEKLLEETIKLAERIGEHSPLIVTQVKE 139
A E T +EA + GV+ + +LL+++ + +I + +
Sbjct: 143 NATIAEEFITKDLSLTPEEALKYGVIEVVARDINELLKKSNGMKTKIPVNGRYVTLNFTN 202
Query: 140 A 140
Sbjct: 203 V 203
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.0 bits (69), Expect = 0.16
Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 30/101 (29%)
Query: 59 QPE--IIIGTMPGAGGTQRLTRAAGKSN-AMEICLTGNQFTAQEAKEMGV----VSKIFP 111
+P ++I + G +GK+ A+++C + Q + + +
Sbjct: 148 RPAKNVLIDGVLG----------SGKTWVALDVC---LSYKVQCKMDFKIFWLNLKNCNS 194
Query: 112 PEKLLEETIKLAERI-------GEHS---PLIVTQVKEAVN 142
PE +LE KL +I +HS L + ++ +
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 26.8 bits (58), Expect = 2.3
Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 20/45 (44%)
Query: 99 EAKEMGVVSKIFPPEKLLEETIKL-AERIGEHSPLIVTQVKEAVN 142
E + + K L+ ++KL A+ + +P + A+
Sbjct: 18 EKQAL----------KKLQASLKLYAD---DSAPAL------AIK 43
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba
histolytica}
Length = 487
Score = 25.7 bits (57), Expect = 7.6
Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 27 IQCLKIWIYLGGGCELAMMCD---IIYAG------EKAKFGQPEIIIGTMPGAGGT 73
CL++ + G + +M D ++ G + + + EI T P G+
Sbjct: 232 TTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGS 287
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.139 0.409
Gapped
Lambda K H
0.267 0.0799 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,366,169
Number of extensions: 139296
Number of successful extensions: 364
Number of sequences better than 10.0: 1
Number of HSP's gapped: 322
Number of HSP's successfully gapped: 88
Length of query: 152
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 67
Effective length of database: 4,328,508
Effective search space: 290010036
Effective search space used: 290010036
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.1 bits)