Your job contains 1 sequence.
>psy9283
MNETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRD
EKEKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRC
EREFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSL
EHIPEERTQIILTYLDELEKRGPPPPPTASEPNRRLGNNYVNTFGAYPKPGIGGSGDMFE
DN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9283
(242 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NT10 - symbol:TCERG1 "Uncharacterized protein... 658 5.3e-64 1
UNIPROTKB|F1MKU9 - symbol:TCERG1 "Uncharacterized protein... 657 9.1e-64 1
UNIPROTKB|F1RM10 - symbol:TCERG1 "Uncharacterized protein... 657 9.4e-64 1
RGD|1311748 - symbol:Tcerg1 "transcription elongation reg... 657 1.0e-63 1
UNIPROTKB|O14776 - symbol:TCERG1 "Transcription elongatio... 657 1.1e-63 1
MGI|MGI:1926421 - symbol:Tcerg1 "transcription elongation... 657 1.1e-63 1
WB|WBGene00022853 - symbol:ZK1127.6 species:6239 "Caenorh... 389 4.4e-36 1
WB|WBGene00022855 - symbol:tcer-1 species:6239 "Caenorhab... 380 4.8e-34 1
ZFIN|ZDB-GENE-081014-1 - symbol:arhgap5 "Rho GTPase activ... 157 2.7e-08 2
UNIPROTKB|Q13017 - symbol:ARHGAP5 "Rho GTPase-activating ... 153 6.0e-08 1
UNIPROTKB|I3LD06 - symbol:I3LD06 "Uncharacterized protein... 150 1.2e-07 1
RGD|1308507 - symbol:Arhgap5 "Rho GTPase activating prote... 149 1.5e-07 1
UNIPROTKB|E9PTJ5 - symbol:Arhgap5 "Protein Arhgap5" speci... 149 1.5e-07 1
UNIPROTKB|E1BM23 - symbol:LOC539086 "Uncharacterized prot... 149 1.8e-07 1
MGI|MGI:1332637 - symbol:Arhgap5 "Rho GTPase activating p... 149 1.9e-07 1
UNIPROTKB|E2RED4 - symbol:ARHGAP5 "Uncharacterized protei... 149 1.9e-07 1
UNIPROTKB|F1NG56 - symbol:ARHGAP5 "Uncharacterized protei... 143 7.1e-07 1
TAIR|locus:2091171 - symbol:PRP40B "pre-mRNA-processing p... 135 5.2e-06 1
DICTYBASE|DDB_G0271058 - symbol:vilC "villin-like protein... 136 6.6e-06 1
FB|FBgn0261641 - symbol:CG42724 species:7227 "Drosophila ... 133 7.1e-06 2
RGD|1308738 - symbol:Arhgap35 "Rho GTPase activating prot... 135 8.6e-06 1
UNIPROTKB|P81128 - symbol:Arhgap35 "Rho GTPase-activating... 135 8.6e-06 1
UNIPROTKB|J9PAI3 - symbol:TCHH "Uncharacterized protein" ... 132 1.7e-05 1
MGI|MGI:1929494 - symbol:Grlf1 "glucocorticoid receptor D... 129 4.2e-05 1
UNIPROTKB|E1B801 - symbol:ARHGAP35 "Uncharacterized prote... 128 5.4e-05 1
UNIPROTKB|J9NUY1 - symbol:ARHGAP35 "Rho GTPase-activating... 128 5.5e-05 1
UNIPROTKB|Q9NRY4 - symbol:ARHGAP35 "Rho GTPase-activating... 127 7.1e-05 1
UNIPROTKB|F1RM07 - symbol:ARHGAP35 "Uncharacterized prote... 127 7.1e-05 1
UNIPROTKB|Q8IIG7 - symbol:PF11_0207 "Uncharacterized prot... 125 8.1e-05 1
ZFIN|ZDB-GENE-091116-95 - symbol:si:dkey-217f16.1 "si:dke... 125 0.00015 1
UNIPROTKB|P83509 - symbol:ARHGAP35 "Rho GTPase-activating... 128 0.00018 2
UNIPROTKB|Q5RE49 - symbol:TCHP "Trichoplein keratin filam... 118 0.00019 1
UNIPROTKB|H9KZU2 - symbol:ARHGAP35 "Uncharacterized prote... 119 0.00058 1
UNIPROTKB|Q9BT92 - symbol:TCHP "Trichoplein keratin filam... 113 0.00071 1
DICTYBASE|DDB_G0270864 - symbol:DDB_G0270864 "unknown" sp... 116 0.00076 1
DICTYBASE|DDB_G0285911 - symbol:DDB_G0285911 "LIM-type zi... 116 0.00086 1
TAIR|locus:2194894 - symbol:PRP40A "pre-mRNA-processing p... 115 0.00099 1
>UNIPROTKB|F1NT10 [details] [associations]
symbol:TCERG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IEA]
[GO:0070064 "proline-rich region binding" evidence=IEA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 GeneTree:ENSGT00530000062987 OMA:MEEMNED
EMBL:AADN02028198 EMBL:AADN02028199 IPI:IPI00584064
Ensembl:ENSGALT00000012177 Uniprot:F1NT10
Length = 1019
Score = 658 (236.7 bits), Expect = 5.3e-64, P = 5.3e-64
Identities = 119/213 (55%), Positives = 175/213 (82%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E D++ ++ R+EA + K + + VR+S+++W + +R LRKDHRW+S LL+R+EK
Sbjct: 807 EIDREREQHKREEAI--QNFKALLSDM-VRSSDVSWSDTRRTLRKDHRWESGSLLEREEK 863
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCER 122
EKLFNEHIE LTKKKRE FR+LL+ETS +TL+S+WK+++K+IKEDPR KFSSSDR+ +R
Sbjct: 864 EKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQR 923
Query: 123 EFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEH 182
EF++Y++DK TAKA+FR LL+ETK I+++S L+ E++ +L ++E+IL+NDKR+L L+
Sbjct: 924 EFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDC 983
Query: 183 IPEERTQIILTYLDELEKRGPPPPPTASEPNRR 215
+PEER ++I++Y+D+L++RGPPPPPTASEP RR
Sbjct: 984 VPEERRKLIVSYVDDLDRRGPPPPPTASEPTRR 1016
Score = 116 (45.9 bits), Expect = 0.00082, P = 0.00082
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWD--------- 52
+E +K+ +++AR EASLRERE+EVQ+ + + E+ RE ++ R++ +
Sbjct: 774 SEKEKELERQARIEASLREREREVQKARSEQTKEID-REREQHKREEAIQNFKALLSDMV 832
Query: 53 -SADLLDRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRY 110
S+D+ D + L +H E + +RE+ +L NE E + R+L+ E
Sbjct: 833 RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAI 892
Query: 111 TKFSS--SDRRCEREFKDYLKDKTSTAKA--EFRELLQETKLISHKS--LGLLHENENYL 164
T S+ ++ +E +K +S K EF E +++ K I+ K+ LL E +
Sbjct: 893 TLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRD-KYITAKADFRTLLKETKFIT 951
Query: 165 SEIEEILR-NDKRFLSLEHI 183
+++++ +D+ +E I
Sbjct: 952 YRSKKLIQESDQHLKDVEKI 971
>UNIPROTKB|F1MKU9 [details] [associations]
symbol:TCERG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 CTD:10915 KO:K12824 OMA:MEEMNED
EMBL:DAAA02020555 IPI:IPI01001763 RefSeq:XP_002689326.1
RefSeq:XP_002704921.2 UniGene:Bt.109736 Ensembl:ENSBTAT00000061039
GeneID:540964 KEGG:bta:540964 NextBio:20878935 ArrayExpress:F1MKU9
Uniprot:F1MKU9
Length = 1062
Score = 657 (236.3 bits), Expect = 9.1e-64, P = 9.1e-64
Identities = 119/213 (55%), Positives = 174/213 (81%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E D++ ++ R+EA + K + + VR+S+++W + +R LRKDHRW+S LL+R+EK
Sbjct: 850 EIDREREQHKREEAI--QNFKALLSDM-VRSSDVSWSDTRRTLRKDHRWESGSLLEREEK 906
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCER 122
EKLFNEHIE LTKKKRE FR+LL+ETS +TL+S+WK+++K+IKEDPR KFSSSDR+ +R
Sbjct: 907 EKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQR 966
Query: 123 EFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEH 182
EF++Y++DK TAKA+FR LL+ETK I+++S L+ E++ +L ++E+IL+NDKR+L L+
Sbjct: 967 EFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDC 1026
Query: 183 IPEERTQIILTYLDELEKRGPPPPPTASEPNRR 215
+PEER ++I+ Y+D+L++RGPPPPPTASEP RR
Sbjct: 1027 VPEERRKLIVAYVDDLDRRGPPPPPTASEPTRR 1059
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWD--------- 52
+E +K+ +++AR EASLRERE+EVQ+ + + E+ RE ++ R++ +
Sbjct: 817 SEKEKELERQARIEASLREREREVQKARSEQTKEID-REREQHKREEAIQNFKALLSDMV 875
Query: 53 -SADLLDRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRY 110
S+D+ D + L +H E + +RE+ +L NE E + R+L+ E
Sbjct: 876 RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAI 935
Query: 111 TKFSS--SDRRCEREFKDYLKDKTSTAKA--EFRELLQETKLISHKS--LGLLHENENYL 164
T S+ ++ +E +K +S K EF E +++ K I+ K+ LL E +
Sbjct: 936 TLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRD-KYITAKADFRTLLKETKFIT 994
Query: 165 SEIEEILR-NDKRFLSLEHI 183
+++++ +D+ +E I
Sbjct: 995 YRSKKLIQESDQHLKDVEKI 1014
>UNIPROTKB|F1RM10 [details] [associations]
symbol:TCERG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 KO:K12824 OMA:MEEMNED EMBL:CU462939
EMBL:FP015780 RefSeq:XP_003354387.2 Ensembl:ENSSSCT00000015755
GeneID:100621703 KEGG:ssc:100621703 Uniprot:F1RM10
Length = 1068
Score = 657 (236.3 bits), Expect = 9.4e-64, P = 9.4e-64
Identities = 119/213 (55%), Positives = 174/213 (81%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E D++ ++ R+EA + K + + VR+S+++W + +R LRKDHRW+S LL+R+EK
Sbjct: 856 EIDREREQHKREEAI--QNFKALLSDM-VRSSDVSWSDTRRTLRKDHRWESGSLLEREEK 912
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCER 122
EKLFNEHIE LTKKKRE FR+LL+ETS +TL+S+WK+++K+IKEDPR KFSSSDR+ +R
Sbjct: 913 EKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQR 972
Query: 123 EFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEH 182
EF++Y++DK TAKA+FR LL+ETK I+++S L+ E++ +L ++E+IL+NDKR+L L+
Sbjct: 973 EFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDC 1032
Query: 183 IPEERTQIILTYLDELEKRGPPPPPTASEPNRR 215
+PEER ++I+ Y+D+L++RGPPPPPTASEP RR
Sbjct: 1033 VPEERRKLIVAYVDDLDRRGPPPPPTASEPTRR 1065
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWD--------- 52
+E +K+ +++AR EASLRERE+EVQ+ + + E+ RE ++ R++ +
Sbjct: 823 SEKEKELERQARIEASLREREREVQKARSEQTKEID-REREQHKREEAIQNFKALLSDMV 881
Query: 53 -SADLLDRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRY 110
S+D+ D + L +H E + +RE+ +L NE E + R+L+ E
Sbjct: 882 RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAI 941
Query: 111 TKFSS--SDRRCEREFKDYLKDKTSTAKA--EFRELLQETKLISHKS--LGLLHENENYL 164
T S+ ++ +E +K +S K EF E +++ K I+ K+ LL E +
Sbjct: 942 TLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRD-KYITAKADFRTLLKETKFIT 1000
Query: 165 SEIEEILR-NDKRFLSLEHI 183
+++++ +D+ +E I
Sbjct: 1001 YRSKKLIQESDQHLKDVEKI 1020
>RGD|1311748 [details] [associations]
symbol:Tcerg1 "transcription elongation regulator 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0070064 "proline-rich
region binding" evidence=ISO] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 RGD:1311748
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 CTD:10915 KO:K12824 OMA:MEEMNED
OrthoDB:EOG40CHGM IPI:IPI00367866 RefSeq:NP_001100860.2
Ensembl:ENSRNOT00000025467 GeneID:307474 KEGG:rno:307474
UCSC:RGD:1311748 ArrayExpress:D3ZTL0 Uniprot:D3ZTL0
Length = 1081
Score = 657 (236.3 bits), Expect = 1.0e-63, P = 1.0e-63
Identities = 119/213 (55%), Positives = 174/213 (81%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E D++ ++ R+EA + K + + VR+S+++W + +R LRKDHRW+S LL+R+EK
Sbjct: 869 EIDREREQHKREEAI--QNFKALLSDM-VRSSDVSWSDTRRTLRKDHRWESGSLLEREEK 925
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCER 122
EKLFNEHIE LTKKKRE FR+LL+ETS +TL+S+WK+++K+IKEDPR KFSSSDR+ +R
Sbjct: 926 EKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQR 985
Query: 123 EFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEH 182
EF++Y++DK TAKA+FR LL+ETK I+++S L+ E++ +L ++E+IL+NDKR+L L+
Sbjct: 986 EFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDC 1045
Query: 183 IPEERTQIILTYLDELEKRGPPPPPTASEPNRR 215
+PEER ++I+ Y+D+L++RGPPPPPTASEP RR
Sbjct: 1046 VPEERRKLIVAYVDDLDRRGPPPPPTASEPTRR 1078
Score = 116 (45.9 bits), Expect = 0.00088, P = 0.00087
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWD--------- 52
+E +K+ +++AR EASLRERE+EVQ+ + + E+ RE ++ R++ +
Sbjct: 836 SEKEKELERQARIEASLREREREVQKARSEQTKEID-REREQHKREEAIQNFKALLSDMV 894
Query: 53 -SADLLDRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRY 110
S+D+ D + L +H E + +RE+ +L NE E + R+L+ E
Sbjct: 895 RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAI 954
Query: 111 TKFSS--SDRRCEREFKDYLKDKTSTAKA--EFRELLQETKLISHKS--LGLLHENENYL 164
T S+ ++ +E +K +S K EF E +++ K I+ K+ LL E +
Sbjct: 955 TLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRD-KYITAKADFRTLLKETKFIT 1013
Query: 165 SEIEEILR-NDKRFLSLEHI 183
+++++ +D+ +E I
Sbjct: 1014 YRSKKLIQESDQHLKDVEKI 1033
>UNIPROTKB|O14776 [details] [associations]
symbol:TCERG1 "Transcription elongation regulator 1"
species:9606 "Homo sapiens" [GO:0070064 "proline-rich region
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 GO:GO:0005634 GO:GO:0003713
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
eggNOG:COG5104 EMBL:AF017789 EMBL:AB209910 EMBL:BC111727
IPI:IPI00247871 IPI:IPI00744062 PIR:T08599 RefSeq:NP_001035095.1
RefSeq:NP_006697.2 UniGene:Hs.735127 PDB:2DK7 PDB:2DOD PDB:2DOE
PDB:2DOF PDB:2E71 PDB:2KIQ PDB:2KIS PDB:2NNT PDB:3HFH PDBsum:2DK7
PDBsum:2DOD PDBsum:2DOE PDBsum:2DOF PDBsum:2E71 PDBsum:2KIQ
PDBsum:2KIS PDBsum:2NNT PDBsum:3HFH ProteinModelPortal:O14776
SMR:O14776 IntAct:O14776 MINT:MINT-158391 STRING:O14776
PhosphoSite:O14776 PaxDb:O14776 PRIDE:O14776
Ensembl:ENST00000296702 Ensembl:ENST00000394421 GeneID:10915
KEGG:hsa:10915 UCSC:uc003lob.3 UCSC:uc003loc.3 CTD:10915
GeneCards:GC05P145807 HGNC:HGNC:15630 MIM:605409 neXtProt:NX_O14776
PharmGKB:PA38007 HOGENOM:HOG000008544 HOVERGEN:HBG062908
InParanoid:O14776 KO:K12824 OMA:MEEMNED OrthoDB:EOG40CHGM
PhylomeDB:O14776 EvolutionaryTrace:O14776 GenomeRNAi:10915
NextBio:41457 ArrayExpress:O14776 Bgee:O14776 CleanEx:HS_TCERG1
Genevestigator:O14776 GermOnline:ENSG00000113649 Uniprot:O14776
Length = 1098
Score = 657 (236.3 bits), Expect = 1.1e-63, P = 1.1e-63
Identities = 119/213 (55%), Positives = 174/213 (81%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E D++ ++ R+EA + K + + VR+S+++W + +R LRKDHRW+S LL+R+EK
Sbjct: 886 EIDREREQHKREEAI--QNFKALLSDM-VRSSDVSWSDTRRTLRKDHRWESGSLLEREEK 942
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCER 122
EKLFNEHIE LTKKKRE FR+LL+ETS +TL+S+WK+++K+IKEDPR KFSSSDR+ +R
Sbjct: 943 EKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQR 1002
Query: 123 EFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEH 182
EF++Y++DK TAKA+FR LL+ETK I+++S L+ E++ +L ++E+IL+NDKR+L L+
Sbjct: 1003 EFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDC 1062
Query: 183 IPEERTQIILTYLDELEKRGPPPPPTASEPNRR 215
+PEER ++I+ Y+D+L++RGPPPPPTASEP RR
Sbjct: 1063 VPEERRKLIVAYVDDLDRRGPPPPPTASEPTRR 1095
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWD--------- 52
+E +K+ +++AR EASLRERE+EVQ+ + + E+ RE ++ R++ +
Sbjct: 853 SEKEKELERQARIEASLREREREVQKARSEQTKEID-REREQHKREEAIQNFKALLSDMV 911
Query: 53 -SADLLDRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRY 110
S+D+ D + L +H E + +RE+ +L NE E + R+L+ E
Sbjct: 912 RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAI 971
Query: 111 TKFSS--SDRRCEREFKDYLKDKTSTAKA--EFRELLQETKLISHKS--LGLLHENENYL 164
T S+ ++ +E +K +S K EF E +++ K I+ K+ LL E +
Sbjct: 972 TLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRD-KYITAKADFRTLLKETKFIT 1030
Query: 165 SEIEEILR-NDKRFLSLEHI 183
+++++ +D+ +E I
Sbjct: 1031 YRSKKLIQESDQHLKDVEKI 1050
>MGI|MGI:1926421 [details] [associations]
symbol:Tcerg1 "transcription elongation regulator 1 (CA150)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0016363 "nuclear
matrix" evidence=ISS] [GO:0070064 "proline-rich region binding"
evidence=IDA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 MGI:MGI:1926421 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 GO:GO:0070064 GO:GO:0001106
Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
PDB:2JUP PDB:2RLY PDB:2RM0 PDBsum:2JUP PDBsum:2RLY PDBsum:2RM0
eggNOG:COG5104 GeneTree:ENSGT00530000062987 CTD:10915
HOGENOM:HOG000008544 HOVERGEN:HBG062908 KO:K12824 OMA:MEEMNED
OrthoDB:EOG40CHGM EMBL:BC039185 EMBL:BC040284 EMBL:AB023485
EMBL:U40749 EMBL:AK082750 IPI:IPI00229485 IPI:IPI00471277
IPI:IPI00471279 PIR:S64716 RefSeq:NP_001034563.1 UniGene:Mm.270511
PDB:1E0L PDB:2YSI PDBsum:1E0L PDBsum:2YSI ProteinModelPortal:Q8CGF7
SMR:Q8CGF7 STRING:Q8CGF7 PhosphoSite:Q8CGF7 PaxDb:Q8CGF7
PRIDE:Q8CGF7 Ensembl:ENSMUST00000025375 Ensembl:ENSMUST00000173642
GeneID:56070 KEGG:mmu:56070 UCSC:uc008etw.1 InParanoid:Q8CGF7
EvolutionaryTrace:Q8CGF7 NextBio:311856 Bgee:Q8CGF7
CleanEx:MM_TCERG1 Genevestigator:Q8CGF7
GermOnline:ENSMUSG00000024498 Uniprot:Q8CGF7
Length = 1100
Score = 657 (236.3 bits), Expect = 1.1e-63, P = 1.1e-63
Identities = 119/213 (55%), Positives = 174/213 (81%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E D++ ++ R+EA + K + + VR+S+++W + +R LRKDHRW+S LL+R+EK
Sbjct: 888 EIDREREQHKREEAI--QNFKALLSDM-VRSSDVSWSDTRRTLRKDHRWESGSLLEREEK 944
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCER 122
EKLFNEHIE LTKKKRE FR+LL+ETS +TL+S+WK+++K+IKEDPR KFSSSDR+ +R
Sbjct: 945 EKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQR 1004
Query: 123 EFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEH 182
EF++Y++DK TAKA+FR LL+ETK I+++S L+ E++ +L ++E+IL+NDKR+L L+
Sbjct: 1005 EFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDC 1064
Query: 183 IPEERTQIILTYLDELEKRGPPPPPTASEPNRR 215
+PEER ++I+ Y+D+L++RGPPPPPTASEP RR
Sbjct: 1065 VPEERRKLIVAYVDDLDRRGPPPPPTASEPTRR 1097
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWD--------- 52
+E +K+ +++AR EASLRERE+EVQ+ + + E+ RE ++ R++ +
Sbjct: 855 SEKEKELERQARIEASLREREREVQKARSEQTKEID-REREQHKREEAIQNFKALLSDMV 913
Query: 53 -SADLLDRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRY 110
S+D+ D + L +H E + +RE+ +L NE E + R+L+ E
Sbjct: 914 RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAI 973
Query: 111 TKFSS--SDRRCEREFKDYLKDKTSTAKA--EFRELLQETKLISHKS--LGLLHENENYL 164
T S+ ++ +E +K +S K EF E +++ K I+ K+ LL E +
Sbjct: 974 TLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRD-KYITAKADFRTLLKETKFIT 1032
Query: 165 SEIEEILR-NDKRFLSLEHI 183
+++++ +D+ +E I
Sbjct: 1033 YRSKKLIQESDQHLKDVEKI 1052
>WB|WBGene00022853 [details] [associations]
symbol:ZK1127.6 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] GO:GO:0016246 GO:GO:0000003
EMBL:FO081697 Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 SUPFAM:SSF81698 GeneTree:ENSGT00530000062987
PIR:E88196 RefSeq:NP_495441.1 ProteinModelPortal:Q23398 SMR:Q23398
STRING:Q23398 PaxDb:Q23398 EnsemblMetazoa:ZK1127.6.1
EnsemblMetazoa:ZK1127.6.2 GeneID:174149 KEGG:cel:CELE_ZK1127.6
UCSC:ZK1127.6.1 CTD:174149 WormBase:ZK1127.6 eggNOG:NOG283575
InParanoid:Q23398 OMA:HECKFIT NextBio:882739 Uniprot:Q23398
Length = 424
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 75/210 (35%), Positives = 135/210 (64%)
Query: 11 KARQEASLREREKEVQRTLA--VRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNE 68
K ++ + E E + L ++++E +W EA+R LRKD R+ + D+LD+ KE LF++
Sbjct: 213 KESEKQKMGEHEDTYRNLLIDLIKSTENSWHEARRILRKDERYANCDMLDKTRKESLFDD 272
Query: 69 HIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIK-EDPRYTKFSS-SDRRCEREFKD 126
HI+ L +K+RE F ++L+ ++T W+D +K+I+ E+ + K +S S+R+ ER+F+D
Sbjct: 273 HIKSLERKRREAFFQVLDNHEKITPMMRWRDAKKIIQDEEETFVKIASNSERKVERDFRD 332
Query: 127 YLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIP-E 185
+ + + EF+E+L ETK+I+HKS L+ E E ++ +I +L NDKR++ + +
Sbjct: 333 WQERRHDHLTDEFKEMLSETKIITHKSKKLMEEGEQHMKDILSVLENDKRWVRMTAMSAS 392
Query: 186 ERTQIILTYLDELEKRGPPPPPTASEPNRR 215
ER +++ +++ L ++G PPPPT E +RR
Sbjct: 393 ERDRMLEDHIENLGRKGTPPPPTQQERDRR 422
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 19 REREKEVQRTLAV--RNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKK 76
+E ++E + LA N ++ + KD R+ + + +RD +E FN+ + EL KK
Sbjct: 47 KEAKEEFPKLLAECELNGRSSYSSFTSKFGKDPRYKAVER-NRD-REDAFNDFVGELHKK 104
Query: 77 -------KREK----FRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCE--RE 123
K+EK F +LL E + +T S W +K ++++ RY SS R RE
Sbjct: 105 EKDEKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFRE 164
Query: 124 FKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKR 176
F L D+T++ E +E +E +L + ++ N E+E L N R
Sbjct: 165 FVANLGDETASDIEEEQE--REKRLAAQTAIA------NRQKEVEAELGNQLR 209
>WB|WBGene00022855 [details] [associations]
symbol:tcer-1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0016246 GO:GO:0010171 GO:GO:0040011
GO:GO:0042127 GO:GO:0040035 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0040020 EMBL:FO081697 Gene3D:1.10.10.440 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698 HSSP:Q61051
GeneTree:ENSGT00530000062987 KO:K12824 UniGene:Cel.18223
GeneID:174150 KEGG:cel:CELE_ZK1127.9 UCSC:ZK1127.9a CTD:174150
NextBio:882743 HOGENOM:HOG000019394 RefSeq:NP_495443.1
ProteinModelPortal:Q95PX7 SMR:Q95PX7 IntAct:Q95PX7 STRING:Q95PX7
PRIDE:Q95PX7 EnsemblMetazoa:ZK1127.9a WormBase:ZK1127.9a
InParanoid:Q95PX7 OMA:LWVETET ArrayExpress:Q95PX7 Uniprot:Q95PX7
Length = 914
Score = 380 (138.8 bits), Expect = 4.8e-34, P = 4.8e-34
Identities = 75/210 (35%), Positives = 135/210 (64%)
Query: 11 KARQEASLREREKEVQRTLA--VRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNE 68
K ++ + E E + L ++++E +W EA+R LRKD R+ + D+LD+ KE LF++
Sbjct: 704 KESEKQKMGEHEDTYRNLLIDLIKSTENSWHEARRILRKDERYANCDMLDKTRKESLFDD 763
Query: 69 HIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIK-EDPRYTKFSS-SDRRCEREFKD 126
HI+ L +K+RE F ++L+ ++T W+D +K+I+ E+ + K +S S+R+ ER+F+D
Sbjct: 764 HIKSLERKRREAFFQVLDNHEKITPMMRWRDAKKIIQDEEETFVKIASNSERKVERDFRD 823
Query: 127 YLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIP-E 185
+ + + EF+E+L ETK+I+HKS L+ E E ++ +I +L NDKR++ + +
Sbjct: 824 WQERRHDHLTDEFKEMLSETKIITHKSKKLMEEGEQHM-DILSVLENDKRWVRMTAMSAS 882
Query: 186 ERTQIILTYLDELEKRGPPPPPTASEPNRR 215
ER +++ +++ L ++G PPPPT E +RR
Sbjct: 883 ERDRMLEDHIENLGRKGTPPPPTQQERDRR 912
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 5 DKDADKKARQEASLREREKEVQRTLAV--RNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
+K +KA + ++E ++E Q+ LA N ++ + KD R+ + + +RD +
Sbjct: 524 EKIESEKAERRKRVKEAKEEFQKLLAECELNGRSSYSSFTSKFGKDPRYKAVER-NRD-R 581
Query: 63 EKLFNEHIEELTKK-------KREK----FRELLNETSEVTLSSSWKDIRKLIKEDPRYT 111
E FN+ + EL KK K+EK F +LL E + +T S W +K ++++ RY
Sbjct: 582 EDAFNDFVGELHKKEKDEKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKKTLEDEERYI 641
Query: 112 KFSSSDRRCE--REFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEE 169
SS R REF L D+T++ E +E +E +L + ++ N E+E
Sbjct: 642 ALDSSSTRESLFREFVANLGDETASDIEEEQE--REKRLAAQTAIA------NRQKEVEA 693
Query: 170 ILRNDKR 176
L N R
Sbjct: 694 ELGNQLR 700
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 57/205 (27%), Positives = 101/205 (49%)
Query: 2 NETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQ-LRK--DHRWDSADLLD 58
+E+D+D KA++ S E++KE +A + E +E RQ L+K D + A++
Sbjct: 411 SESDEDGPPKAKK--SRAEKKKEA--LIAAQKKE---KERPRQMLQKPVDPAIE-AEMQA 462
Query: 59 RDEKEKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDR 118
E+EK+ +EE K+ F+E+L E + T S+ K++ K++ D RY +++R
Sbjct: 463 AKEREKV---PLEERLKQ----FKEMLEEKNVSTSSTFEKELSKIVF-DKRYLSLGATER 514
Query: 119 R-CEREFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHEN-ENYLSEIEEILRNDKR 176
R C F + ++K + KAE R+ ++E K K L N + S D R
Sbjct: 515 RAC---FDAFCREKIESEKAERRKRVKEAKEEFQKLLAECELNGRSSYSSFTSKFGKDPR 571
Query: 177 FLSLEHIPEERTQIILTYLDELEKR 201
+ ++E +R ++ EL K+
Sbjct: 572 YKAVER-NRDREDAFNDFVGELHKK 595
>ZFIN|ZDB-GENE-081014-1 [details] [associations]
symbol:arhgap5 "Rho GTPase activating protein 5"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449 PROSITE:PS50238
SMART:SM00324 ZFIN:ZDB-GENE-081014-1 GO:GO:0005525 GO:GO:0007264
Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0005622 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00690000101648 EMBL:BX950192 IPI:IPI00804125
PRIDE:F1R372 Ensembl:ENSDART00000086696 Bgee:F1R372 Uniprot:F1R372
Length = 1503
Score = 157 (60.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 40/164 (24%), Positives = 78/164 (47%)
Query: 38 WREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKKR-----EKFRELLNETSEVT 92
W E + D R D+L + E+++ H++ L +KR EKF++ L ++
Sbjct: 386 WYETDHLDKTDDRRVPFDILQTMQGERIYQNHVQHLISEKRRLEMKEKFKKTLERVHFIS 445
Query: 93 LSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISH 151
W+++ + ED Y + SDRR + + ++ AK EF+E+L E +L
Sbjct: 446 PGQPWEEVMCFVMEDEAYKYITESDRR--DVYSRHQQEIVERAKEEFQEMLFEHAELFYD 503
Query: 152 KSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQIILTYL 195
L + +SEI +L + R+ +L+ + +R ++L ++
Sbjct: 504 LDLNATPSYDK-MSEIHAVLNEEPRYRALQKLATDRESLLLKHI 546
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 193 TYLDELEKRGPPPPPTASEPN 213
T + E E+ PPP +PN
Sbjct: 1024 TPVGEHERNHKVPPPVKPKPN 1044
>UNIPROTKB|Q13017 [details] [associations]
symbol:ARHGAP5 "Rho GTPase-activating protein 5"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0008361 "regulation of cell size" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0042169 "SH2 domain
binding" evidence=IPI] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005100 "Rho GTPase activator activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007266 "Rho protein
signal transduction" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007264
"small GTPase mediated signal transduction" evidence=TAS]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=TAS] InterPro:IPR000198 InterPro:IPR001806
InterPro:IPR008936 Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449
PROSITE:PS50238 SMART:SM00324 GO:GO:0005525 GO:GO:0005829
Reactome:REACT_111102 GO:GO:0016020 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0003924 GO:GO:0007155 GO:GO:0008361
EMBL:CH471078 GO:GO:0030335 GO:GO:0007266 GO:GO:0005100
GO:GO:0002053 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
eggNOG:NOG241832 EMBL:U17032 EMBL:BC032723 EMBL:BC050059
EMBL:BC075799 EMBL:BC129928 EMBL:BC129929 EMBL:AK292966
EMBL:AB209751 IPI:IPI00013988 IPI:IPI00646885 IPI:IPI00744108
IPI:IPI00895772 PIR:B59431 RefSeq:NP_001025226.1 RefSeq:NP_001164.2
UniGene:Hs.592313 PDB:2EE4 PDB:2EE5 PDBsum:2EE4 PDBsum:2EE5
ProteinModelPortal:Q13017 SMR:Q13017 MINT:MINT-1191615
STRING:Q13017 PhosphoSite:Q13017 DMDM:190358871 PaxDb:Q13017
PRIDE:Q13017 Ensembl:ENST00000345122 Ensembl:ENST00000396582
Ensembl:ENST00000432921 Ensembl:ENST00000433497
Ensembl:ENST00000539826 Ensembl:ENST00000556611 GeneID:394
KEGG:hsa:394 UCSC:uc001wrl.3 UCSC:uc001wrm.3 UCSC:uc001wro.3
UCSC:uc001wrp.3 CTD:394 GeneCards:GC14P032546 HGNC:HGNC:675
HPA:HPA046993 MIM:602680 neXtProt:NX_Q13017 PharmGKB:PA24959
HOVERGEN:HBG051844 InParanoid:Q13017 KO:K13709 OMA:KTRGKPK
OrthoDB:EOG4PK26Z EvolutionaryTrace:Q13017 GenomeRNAi:394
NextBio:1643 PMAP-CutDB:Q13017 ArrayExpress:Q13017 Bgee:Q13017
CleanEx:HS_ARHGAP5 Genevestigator:Q13017 GermOnline:ENSG00000100852
Uniprot:Q13017
Length = 1502
Score = 153 (58.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 43/184 (23%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 367 LMEKRADFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 425
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED Y + +D + + + ++
Sbjct: 426 RRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAYKYITEADSK--EVYGRHQREIV 483
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 484 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 542
Query: 192 LTYL 195
L ++
Sbjct: 543 LKHI 546
>UNIPROTKB|I3LD06 [details] [associations]
symbol:I3LD06 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] InterPro:IPR000198 InterPro:IPR001806
Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525 GO:GO:0007264
Gene3D:1.10.555.10 GO:GO:0005622 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 GeneTree:ENSGT00690000101648 OMA:KTRGKPK
EMBL:CU469344 Ensembl:ENSSSCT00000002199 Uniprot:I3LD06
Length = 1293
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 366 LMEKRSDFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 424
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED + + +D + + + ++
Sbjct: 425 RRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITETDSK--EVYGRHQREIV 482
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 483 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 541
Query: 192 LTYL 195
L ++
Sbjct: 542 LKHI 545
>RGD|1308507 [details] [associations]
symbol:Arhgap5 "Rho GTPase activating protein 5" species:10116
"Rattus norvegicus" [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008361 "regulation of cell size" evidence=ISO] [GO:0030335
"positive regulation of cell migration" evidence=ISO] [GO:0030879
"mammary gland development" evidence=IEP;ISO] [GO:0042169 "SH2
domain binding" evidence=ISO] InterPro:IPR001806 Pfam:PF00071
PRINTS:PR00449 RGD:1308507 GO:GO:0005525 GO:GO:0007264
GO:GO:0030879 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
eggNOG:NOG241832 CTD:394 HOVERGEN:HBG051844 KO:K13709
IPI:IPI00560241 EMBL:AY387084 RefSeq:NP_001041334.1
UniGene:Rn.20898 ProteinModelPortal:Q6TUE6 SMR:Q6TUE6 STRING:Q6TUE6
PhosphoSite:Q6TUE6 PRIDE:Q6TUE6 GeneID:299012 KEGG:rno:299012
UCSC:RGD:1308507 HOGENOM:HOG000001561 NextBio:644653
ArrayExpress:Q6TUE6 Genevestigator:Q6TUE6 Uniprot:Q6TUE6
Length = 1245
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 366 LMEKRADFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 424
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED + + +D + + + ++
Sbjct: 425 RRIEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSK--EVYGRHQREIV 482
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 483 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 541
Query: 192 LTYL 195
L ++
Sbjct: 542 LKHI 545
>UNIPROTKB|E9PTJ5 [details] [associations]
symbol:Arhgap5 "Protein Arhgap5" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 RGD:1308507
GO:GO:0005525 GO:GO:0007264 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 GeneTree:ENSGT00690000101648 IPI:IPI00560241
Ensembl:ENSRNOT00000041373 ArrayExpress:E9PTJ5 Uniprot:E9PTJ5
Length = 1245
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 366 LMEKRADFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 424
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED + + +D + + + ++
Sbjct: 425 RRIEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSK--EVYGRHQREIV 482
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 483 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 541
Query: 192 LTYL 195
L ++
Sbjct: 542 LKHI 545
>UNIPROTKB|E1BM23 [details] [associations]
symbol:LOC539086 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0008361 "regulation of cell size" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449 PROSITE:PS50238
SMART:SM00324 GO:GO:0005525 GO:GO:0007264 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0008361 GO:GO:0005622 GO:GO:0030335
GO:GO:0002053 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
GeneTree:ENSGT00690000101648 OMA:KTRGKPK EMBL:DAAA02052689
EMBL:DAAA02052690 EMBL:DAAA02052691 EMBL:DAAA02052692
IPI:IPI01001795 Ensembl:ENSBTAT00000038690 Uniprot:E1BM23
Length = 1420
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 367 LMEKRADFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 425
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED + + +D + + + ++
Sbjct: 426 RRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSK--EVYGRHQREIV 483
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 484 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 542
Query: 192 LTYL 195
L ++
Sbjct: 543 LKHI 546
>MGI|MGI:1332637 [details] [associations]
symbol:Arhgap5 "Rho GTPase activating protein 5"
species:10090 "Mus musculus" [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IMP] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0030335
"positive regulation of cell migration" evidence=IMP] [GO:0030879
"mammary gland development" evidence=IMP] [GO:0042169 "SH2 domain
binding" evidence=ISO] InterPro:IPR000198 InterPro:IPR001806
InterPro:IPR008936 Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449
PROSITE:PS50238 SMART:SM00324 MGI:MGI:1332637 GO:GO:0005525
GO:GO:0005737 GO:GO:0007264 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0008361
GO:GO:0030335 GO:GO:0002053 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 eggNOG:NOG241832 HOVERGEN:HBG051844 EMBL:U67160
EMBL:AC114002 EMBL:AC155819 EMBL:AK041016 IPI:IPI00923685
PIR:T42724 UniGene:Mm.35059 UniGene:Mm.466962 UniGene:Mm.474991
ProteinModelPortal:P97393 SMR:P97393 IntAct:P97393 STRING:P97393
PhosphoSite:P97393 PaxDb:P97393 PRIDE:P97393 CleanEx:MM_ARHGAP5
Genevestigator:P97393 GermOnline:ENSMUSG00000035133 Uniprot:P97393
Length = 1501
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 367 LMEKRADFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 425
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED + + +D + + + ++
Sbjct: 426 RRIEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSK--EVYGRHQREIV 483
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 484 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 542
Query: 192 LTYL 195
L ++
Sbjct: 543 LKHI 546
>UNIPROTKB|E2RED4 [details] [associations]
symbol:ARHGAP5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449 PROSITE:PS50238
SMART:SM00324 GO:GO:0005525 GO:GO:0007264 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0005622 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 GeneTree:ENSGT00690000101648 CTD:394 KO:K13709
OMA:KTRGKPK EMBL:AAEX03005654 RefSeq:XP_850368.1
Ensembl:ENSCAFT00000020882 GeneID:490642 KEGG:cfa:490642
Uniprot:E2RED4
Length = 1503
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 18 LREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKK 77
L E+ + Q V + W E + + R DLL E EK++ H++ L +K
Sbjct: 367 LMEKRADFQLCFVVLE-KTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEK 425
Query: 78 R-----EKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKT 132
R EKF++ L + ++ W+++ + ED + + +D + + + ++
Sbjct: 426 RRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSK--EVYGRHQREIV 483
Query: 133 STAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQII 191
AK EF+E+L E ++L L ++ +SEI +L + R+ +L+ + +R ++
Sbjct: 484 EKAKEEFQEMLFEHSELFYDLDLNATPSSDK-MSEIHTVLSEEPRYKALQKLAPDRESLL 542
Query: 192 LTYL 195
L ++
Sbjct: 543 LKHI 546
>UNIPROTKB|F1NG56 [details] [associations]
symbol:ARHGAP5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0008361 "regulation of cell size" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0042169 "SH2 domain binding" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
GO:GO:0007165 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0008361
GO:GO:0005622 GO:GO:0030335 GO:GO:0002053 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 GeneTree:ENSGT00690000101648
EMBL:AADN02003360 EMBL:AADN02003361 IPI:IPI00573618
Ensembl:ENSGALT00000016236 OMA:WESNYLV Uniprot:F1NG56
Length = 1142
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 38/164 (23%), Positives = 80/164 (48%)
Query: 38 WREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKKR-----EKFRELLNETSEVT 92
W E + + R DLL E EK++ H++ L +KR EKF++ L + ++
Sbjct: 23 WDETDHIDKVNDRRIPFDLLTTLEAEKVYQNHVQHLISEKRRIEMKEKFKKTLEKIQFIS 82
Query: 93 LSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISH 151
W+++ + ED + + +D + + + ++ AK EF+E+L E ++L
Sbjct: 83 PGQPWEEVICFVMEDEAFKYITDADSK--EVYGRHQREIVEKAKEEFQEMLFEHSELFYD 140
Query: 152 KSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQIILTYL 195
L ++ +SEI +L + R+ +L+ + +R ++L ++
Sbjct: 141 LDLNATPSSDK-MSEIHAVLSEEPRYKALQKLAPDRESLLLKHI 183
>TAIR|locus:2091171 [details] [associations]
symbol:PRP40B "pre-mRNA-processing protein 40B"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008380 "RNA splicing" evidence=IPI]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0008380 GO:GO:0006351 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AP000417 Gene3D:1.10.10.440 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698 IPI:IPI00525827
IPI:IPI01020219 PIR:T52396 RefSeq:NP_188601.4 UniGene:At.27544
HSSP:O75400 ProteinModelPortal:F4JCC1 SMR:F4JCC1 PRIDE:F4JCC1
EnsemblPlants:AT3G19670.1 GeneID:821504 KEGG:ath:AT3G19670
TAIR:At3g19670 KO:K12821 OMA:SHERPSQ InterPro:IPR027237
PANTHER:PTHR11864:SF0 Uniprot:F4JCC1
Length = 992
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/185 (26%), Positives = 94/185 (50%)
Query: 34 SELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHI---------EELTKKKR--EKFR 82
S+ TW +A R++ D R+ + L E+++ FNE + E L ++K+ E F+
Sbjct: 468 SDWTWEQAMREIINDKRYGALRTLG--ERKQAFNEFLLQTKRAAEEERLARQKKLYEDFK 525
Query: 83 ELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKTSTAKAEFR-E 141
+L E E+T S+ W + ++D R F + +R E++ ++ +D S K + R +
Sbjct: 526 RMLEECVELTPSTRWSKTVTMFEDDER---FKALER--EKDRRNIFEDHVSELKEKGRVK 580
Query: 142 LLQETK--LISHK----SLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQIILTYL 195
L++ K +I +K S + N + ++++ L D+R LE I ++ +I YL
Sbjct: 581 ALEDRKRNIIEYKRFLESCNFIKPNSQW-RKVQDRLEVDERCSRLEKI--DQLEIFQEYL 637
Query: 196 DELEK 200
+LE+
Sbjct: 638 RDLER 642
>DICTYBASE|DDB_G0271058 [details] [associations]
symbol:vilC "villin-like protein C" species:44689
"Dictyostelium discoideum" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR003128 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51089 SMART:SM00262 dictyBase:DDB_G0271058 GO:GO:0007010
EMBL:AAFI02000005 GenomeReviews:CM000150_GR SUPFAM:SSF47050
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 eggNOG:NOG324767
RefSeq:XP_001134479.1 ProteinModelPortal:Q1ZXP5
EnsemblProtists:DDB0232136 GeneID:8617650 KEGG:ddi:DDB_G0271058
InParanoid:Q1ZXP5 OMA:DSRTEND Uniprot:Q1ZXP5
Length = 1528
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 59/208 (28%), Positives = 98/208 (47%)
Query: 3 ETDKD-ADK--KARQEASLRER-EKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLD 58
E +K+ ADK K ++E +ER EKE+ LA E +E +L K+ + +L D
Sbjct: 296 EKEKELADKLEKEQKEKEEKERQEKELADKLAKEQKEKEEKELADKLEKERQ--EKELAD 353
Query: 59 RDEKEKLFNEHIEELTKKKREK--FRELLNETSEVTLSSSW-KDIRKLIKEDPRYTKFSS 115
+ EKEK E ++L K+K+EK +L E E L+ K+ ++ +++ + K
Sbjct: 354 KLEKEKQEKELADKLEKEKQEKESLEKLEKEKQEKELADKLAKEQKEKEEKEEKEEKEKQ 413
Query: 116 SDRRCEREFKDYLKDKTS--TAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRN 173
ER+ K+ + T K E L +E K + K L E E E+ + L
Sbjct: 414 EKEEKERKDKELAAAAAAAETEKLEKERLEKEKKELEEKELAEKLEKEKLEKELTDKLEK 473
Query: 174 DKRFLSL-EHIPEERTQIILTYLDELEK 200
+K+ L + + +E+ L D+LEK
Sbjct: 474 EKKEKELADKLEKEKQDKELA--DKLEK 499
>FB|FBgn0261641 [details] [associations]
symbol:CG42724 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 EMBL:AE014297 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
HSSP:Q61051 GeneTree:ENSGT00530000062987 UniGene:Dm.2280
GeneID:40785 KEGG:dme:Dmel_CG42724 FlyBase:FBgn0261641
GenomeRNAi:40785 NextBio:820572 EMBL:AY069106 RefSeq:NP_001189186.1
RefSeq:NP_788585.1 SMR:Q9VI14 MINT:MINT-794860
EnsemblMetazoa:FBtr0303014 EnsemblMetazoa:FBtr0303017
UCSC:CG33097-RA InParanoid:Q9VI14 Uniprot:Q9VI14
Length = 763
Score = 133 (51.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 48/198 (24%), Positives = 100/198 (50%)
Query: 9 DKKARQEASLREREKEVQ-RTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFN 67
D+ R +A + ++ ++ RT + + E + R + K R + A L + +++
Sbjct: 521 DQVQRVDADDDDDDEVIKIRTESESSVEEVPTKRVRMISKSKRAEDAAL---EAEQRAAK 577
Query: 68 EHIEELTKKKREKFRELLNETSEVTLSSSW-KDIRKLIKEDPRYTKFSSSDRRCEREFKD 126
E + + +F+E+L E +V+ S+W K++ K++ DPRY +S +R+ + F+
Sbjct: 578 ERALVPLEMRVTQFKEMLRE-KDVSAFSTWEKELHKIVF-DPRYLLLTSKERK--QVFEK 633
Query: 127 YLKDKTSTAKAEFRELLQETKLISHKSL---GLLHENENYLSEIEEILRNDKRFLSLEHI 183
Y+KD+ + E R +++ K +SL LH ++ SE + D+R+ ++E +
Sbjct: 634 YVKDRAEEERKEKRNKMRQ-KREDFRSLMEEARLHGKSSF-SEFSQRNAKDERYRAIEKV 691
Query: 184 PEERTQIILTYLDELEKR 201
ER + Y+ E+ +R
Sbjct: 692 -RERESLFNEYIVEVRRR 708
Score = 39 (18.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 3 ETDKDADKKARQEASLREREKEVQ 26
E +A++K+ +EA+ + + +VQ
Sbjct: 493 EKSAEAEQKSGEEANQEQAKSQVQ 516
>RGD|1308738 [details] [associations]
symbol:Arhgap35 "Rho GTPase activating protein 35" species:10116
"Rattus norvegicus" [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043116 "negative
regulation of vascular permeability" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449 PROSITE:PS50238
SMART:SM00324 RGD:1308738 GO:GO:0005525 GO:GO:0005634 GO:GO:0005737
GO:GO:0007264 GO:GO:0006355 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0003677 GO:GO:0006351
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 eggNOG:NOG241832
HOVERGEN:HBG051844 EMBL:M94721 IPI:IPI00198211 PIR:A38218
ProteinModelPortal:P81128 SMR:P81128 STRING:P81128
PhosphoSite:P81128 PRIDE:P81128 UCSC:RGD:1308738
Genevestigator:P81128 Uniprot:P81128
Length = 1513
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 51/201 (25%), Positives = 89/201 (44%)
Query: 1 MNETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRD 60
++E D + KA++ L E + E + V E W E ++ DL+D
Sbjct: 355 LDEVDHLSCIKAKK---LLETKPEFLKWFVVLE-ETPWDETSHIDNMENERIPFDLMDTV 410
Query: 61 EKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPRYTKFSS 115
E+L+ H+E+L ++KR + R E E +T W++ R I + Y
Sbjct: 411 PAEQLYETHLEKLRNERKRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDFYQWLEE 470
Query: 116 SDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRND 174
S + + K AK EF+ELL E ++L L E + I+++L +
Sbjct: 471 SVYM--DIYGKHQKQIIDRAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQDVLGEE 527
Query: 175 KRFLSLEHIPEERTQIILTYL 195
+RF +L+ + ER +IL ++
Sbjct: 528 QRFKALQKLQAERDALILKHI 548
>UNIPROTKB|P81128 [details] [associations]
symbol:Arhgap35 "Rho GTPase-activating protein 35"
species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR000198 InterPro:IPR001806
InterPro:IPR008936 Pfam:PF00071 Pfam:PF00620 PRINTS:PR00449
PROSITE:PS50238 SMART:SM00324 RGD:1308738 GO:GO:0005525
GO:GO:0005634 GO:GO:0005737 GO:GO:0007264 GO:GO:0006355
GO:GO:0005096 GO:GO:0043547 Gene3D:1.10.555.10 SUPFAM:SSF48350
GO:GO:0003677 GO:GO:0006351 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 eggNOG:NOG241832 HOVERGEN:HBG051844 EMBL:M94721
IPI:IPI00198211 PIR:A38218 ProteinModelPortal:P81128 SMR:P81128
STRING:P81128 PhosphoSite:P81128 PRIDE:P81128 UCSC:RGD:1308738
Genevestigator:P81128 Uniprot:P81128
Length = 1513
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 51/201 (25%), Positives = 89/201 (44%)
Query: 1 MNETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRD 60
++E D + KA++ L E + E + V E W E ++ DL+D
Sbjct: 355 LDEVDHLSCIKAKK---LLETKPEFLKWFVVLE-ETPWDETSHIDNMENERIPFDLMDTV 410
Query: 61 EKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPRYTKFSS 115
E+L+ H+E+L ++KR + R E E +T W++ R I + Y
Sbjct: 411 PAEQLYETHLEKLRNERKRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDFYQWLEE 470
Query: 116 SDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRND 174
S + + K AK EF+ELL E ++L L E + I+++L +
Sbjct: 471 SVYM--DIYGKHQKQIIDRAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQDVLGEE 527
Query: 175 KRFLSLEHIPEERTQIILTYL 195
+RF +L+ + ER +IL ++
Sbjct: 528 QRFKALQKLQAERDALILKHI 548
>UNIPROTKB|J9PAI3 [details] [associations]
symbol:TCHH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 InterPro:IPR013787
Pfam:PF01023 GeneTree:ENSGT00700000104144 EMBL:AAEX03011063
Ensembl:ENSCAFT00000043601 OMA:ERADFRQ Uniprot:J9PAI3
Length = 1378
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 59/199 (29%), Positives = 96/199 (48%)
Query: 6 KDADKKARQEASL-REREKEV--QRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRD-- 60
++ D+K R+E L +ERE+++ +R R E +E + QLR+ R + +RD
Sbjct: 886 QERDRKFREEEQLLQEREEQLRQERDRKFREEEQLLQEREEQLRRRER-EQQLRQERDRK 944
Query: 61 --EKEKLFNEHIEELTKKKRE-KFRE---LLNETSEVTLSSSWKDIRKLIKEDPRYTKFS 114
E+E+L E E+L +++ + KFRE LL E E L D RK +E+ +
Sbjct: 945 FREEEQLLQEREEQLRRQEHDRKFREEEQLLQEREE-QLRRQEHD-RKFREEEQLLQERE 1002
Query: 115 SSDRRCEREFKDYLKDKTSTAKAE-FRELLQETKLISHKSLGLLHENENYLSEIEEILRN 173
RR ER+ K +++ + E R +E +L + E E L E EE LR
Sbjct: 1003 EQLRRQERDRKFREEEQLLQEREEQLRRREREQQLCQERDRKF-REEEPLLQEREEQLRR 1061
Query: 174 ---DKRFLSLEHIPEERTQ 189
D++F E + +ER +
Sbjct: 1062 QERDRKFREEEQLLQEREE 1080
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 60/184 (32%), Positives = 86/184 (46%)
Query: 13 RQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEE 72
RQE + RE+E + L R +L RE ++QL ++ D R+E E L E E+
Sbjct: 1007 RQERDRKFREEE--QLLQEREEQLRRREREQQLCQER-----DRKFREE-EPLLQEREEQ 1058
Query: 73 LTKKKRE-KFRE---LLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYL 128
L +++R+ KFRE LL E E L +D RK +E+ + RR ERE L
Sbjct: 1059 LRRQERDRKFREEEQLLQEREE-QLRRQERD-RKFREEEQLLQEREEQLRRRERE--QQL 1114
Query: 129 KDKTSTAKAEFRELLQETK--LISHKSLGLLHENENYLSEIEEILRN---DKRFLSLEHI 183
+ + E LLQE + L + E E L E EE LR D++F E +
Sbjct: 1115 RQERDRKFREEEPLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQERDRKFREEEQL 1174
Query: 184 PEER 187
+ER
Sbjct: 1175 LQER 1178
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 56/197 (28%), Positives = 94/197 (47%)
Query: 6 KDADKKA-RQEASLREREKEVQRTLAVRNSELTWREAKRQLRK---DHRWDSADLLDRDE 61
K A+++ R+E ++ E+E +R R E +E + QLR+ D ++ + L ++
Sbjct: 816 KPAEREQLREEEQVQREEREKRR----RQEEPLLQEREEQLRRQERDRKFREEEQLLQER 871
Query: 62 KEKLFNEHIEELTKKKRE-KFRE---LLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSD 117
+E+L E+ +++R+ KFRE LL E E +D RK +E+ +
Sbjct: 872 EEQLRRREREQQLRQERDRKFREEEQLLQEREEQLRQE--RD-RKFREEEQLLQEREEQL 928
Query: 118 RRCEREFKDYLKDKTSTAKAEFRELLQETK--LISHKSLGLLHENENYLSEIEEILR--- 172
RR ERE L+ + E +LLQE + L + E E L E EE LR
Sbjct: 929 RRRERE--QQLRQERDRKFREEEQLLQEREEQLRRQEHDRKFREEEQLLQEREEQLRRQE 986
Query: 173 NDKRFLSLEHIPEERTQ 189
+D++F E + +ER +
Sbjct: 987 HDRKFREEEQLLQEREE 1003
>MGI|MGI:1929494 [details] [associations]
symbol:Grlf1 "glucocorticoid receptor DNA binding factor 1"
species:10090 "Mus musculus" [GO:0001843 "neural tube closure"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=TAS] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0030900
"forebrain development" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IMP] [GO:0043116 "negative regulation of
vascular permeability" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
MGI:MGI:1929494 GO:GO:0005525 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0007264 GO:GO:0008360 GO:GO:0005096
Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0003677 GO:GO:0015629
GO:GO:0030900 GO:GO:0043116 GO:GO:0006351 GO:GO:0043010
GO:GO:0007229 GO:GO:0001843 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 eggNOG:NOG241832 GeneTree:ENSGT00690000101648
HOVERGEN:HBG051844 KO:K05732 OrthoDB:EOG4DZ1TC EMBL:AK147326
EMBL:AK147688 EMBL:AK173242 IPI:IPI00480321 RefSeq:NP_766327.3
UniGene:Mm.28646 UniGene:Mm.400358 ProteinModelPortal:Q91YM2
SMR:Q91YM2 STRING:Q91YM2 PhosphoSite:Q91YM2 PaxDb:Q91YM2
PRIDE:Q91YM2 Ensembl:ENSMUST00000075845 Ensembl:ENSMUST00000171937
GeneID:232906 KEGG:mmu:232906 CTD:232906 InParanoid:Q91YM2
OMA:LYRTRCS NextBio:381321 Bgee:Q91YM2 CleanEx:MM_GRLF1
Genevestigator:Q91YM2 GermOnline:ENSMUSG00000058230 Uniprot:Q91YM2
Length = 1499
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 50/201 (24%), Positives = 88/201 (43%)
Query: 1 MNETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRD 60
++E D + KA++ L E + E + V E W ++ DL+D
Sbjct: 355 LDEVDHLSCIKAKK---LLETKPEFLKWFVVLE-ETPWDATSHIDNMENERIPFDLMDTV 410
Query: 61 EKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPRYTKFSS 115
E+L+ H+E+L ++KR + R E E +T W++ R I + Y
Sbjct: 411 PAEQLYETHLEKLRNERKRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDFYQWLEE 470
Query: 116 SDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEEILRND 174
S + + K AK EF+ELL E ++L L E + I+++L +
Sbjct: 471 SVYM--DIYGKHQKQIIDRAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQDVLGEE 527
Query: 175 KRFLSLEHIPEERTQIILTYL 195
+RF +L+ + ER +IL ++
Sbjct: 528 QRFKALQKLQAERDALILKHI 548
>UNIPROTKB|E1B801 [details] [associations]
symbol:ARHGAP35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
GO:GO:0005525 GO:GO:0005737 GO:GO:0045892 GO:GO:0007264
GO:GO:0008360 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0015629
GO:GO:0030900 GO:GO:0043116 GO:GO:0043010 GO:GO:0001843
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00690000101648 CTD:2909 KO:K05732 OMA:LYRTRCS
EMBL:DAAA02047406 IPI:IPI00685102 RefSeq:NP_001179327.1
UniGene:Bt.105378 Ensembl:ENSBTAT00000020651 GeneID:540310
KEGG:bta:540310 NextBio:20878556 Uniprot:E1B801
Length = 1500
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 55 DLLDRDEKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPR 109
DL+D E+L+ H+E+L ++KR + R E E +T W++ R I +
Sbjct: 405 DLMDTVPAEQLYEAHLEKLRNERKRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDF 464
Query: 110 YTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIE 168
Y S + + K AK EF+ELL E ++L L E + I+
Sbjct: 465 YQWLEESVYM--DIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQ 521
Query: 169 EILRNDKRFLSLEHIPEERTQIILTYL 195
++L ++RF +L+ + ER +IL ++
Sbjct: 522 DVLGEEQRFKALQKLQAERDALILKHI 548
>UNIPROTKB|J9NUY1 [details] [associations]
symbol:ARHGAP35 "Rho GTPase-activating protein 35"
species:9615 "Canis lupus familiaris" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR000198 InterPro:IPR001806
InterPro:IPR008936 Pfam:PF00071 Pfam:PF00620 PROSITE:PS50238
SMART:SM00324 GO:GO:0005525 GO:GO:0007264 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0005622 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 SUPFAM:SSF81698 GeneTree:ENSGT00690000101648
OMA:LYRTRCS EMBL:AAEX03000852 Ensembl:ENSCAFT00000049532
Uniprot:J9NUY1
Length = 1516
Score = 128 (50.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 55 DLLDRDEKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPR 109
DL+D E+L+ H+E+L ++KR + R E E +T W++ R I +
Sbjct: 405 DLMDTVPAEQLYEAHLEKLRNERKRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDF 464
Query: 110 YTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIE 168
Y S + + K AK EF+ELL E ++L L E + I+
Sbjct: 465 YQWLEESVYM--DIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQ 521
Query: 169 EILRNDKRFLSLEHIPEERTQIILTYL 195
++L ++RF +L+ + ER +IL ++
Sbjct: 522 DVLGEEQRFKALQKLQAERDALILKHI 548
>UNIPROTKB|Q9NRY4 [details] [associations]
symbol:ARHGAP35 "Rho GTPase-activating protein 35"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] [GO:0003714 "transcription
corepressor activity" evidence=TAS] [GO:0005100 "Rho GTPase
activator activity" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=TAS] [GO:0032321 "positive regulation
of Rho GTPase activity" evidence=TAS] InterPro:IPR000198
InterPro:IPR001806 InterPro:IPR008936 Pfam:PF00071 Pfam:PF00620
PROSITE:PS50238 SMART:SM00324 GO:GO:0005525 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0003714 GO:GO:0007411 GO:GO:0045892 GO:GO:0007264
GO:GO:0008360 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0003677
GO:GO:0015629 GO:GO:0030900 GO:GO:0043116 EMBL:CH471126
GO:GO:0006351 GO:GO:0043010 GO:GO:0001843 GO:GO:0005100
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 eggNOG:NOG241832
HOVERGEN:HBG051844 CTD:2909 KO:K05732 OrthoDB:EOG4DZ1TC
EMBL:AB051509 EMBL:BC150257 EMBL:AF159851 EMBL:M73077
IPI:IPI00334715 IPI:IPI00718985 RefSeq:NP_004482.4
UniGene:Hs.509447 PDB:2K85 PDB:3C5H PDB:3FK2 PDBsum:2K85
PDBsum:3C5H PDBsum:3FK2 ProteinModelPortal:Q9NRY4 IntAct:Q9NRY4
STRING:Q9NRY4 PhosphoSite:Q9NRY4 DMDM:29611783 PaxDb:Q9NRY4
PRIDE:Q9NRY4 Ensembl:ENST00000404338 GeneID:2909 KEGG:hsa:2909
UCSC:uc010ekv.3 GeneCards:GC19P047422 H-InvDB:HIX0015264
HGNC:HGNC:4591 HPA:CAB037311 MIM:605277 neXtProt:NX_Q9NRY4
PharmGKB:PA28988 InParanoid:Q9NRY4 ChiTaRS:ARHGAP35
EvolutionaryTrace:Q9NRY4 GenomeRNAi:2909 NextBio:11533
ArrayExpress:Q9NRY4 Bgee:Q9NRY4 CleanEx:HS_GRLF1
Genevestigator:Q9NRY4 GermOnline:ENSG00000160007 Uniprot:Q9NRY4
Length = 1499
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 55 DLLDRDEKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPR 109
DL+D E+L+ H+E+L ++KR + R E E +T W++ R I +
Sbjct: 405 DLMDTVPAEQLYEAHLEKLRNERKRVEMRRAFKENLETSPFITPGKPWEEARSFIMNEDF 464
Query: 110 YTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIE 168
Y S + + K AK EF+ELL E ++L L E + I+
Sbjct: 465 YQWLEESVYM--DIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQ 521
Query: 169 EILRNDKRFLSLEHIPEERTQIILTYL 195
++L ++RF +L+ + ER +IL ++
Sbjct: 522 DVLGEEQRFKALQKLQAERDALILKHI 548
>UNIPROTKB|F1RM07 [details] [associations]
symbol:ARHGAP35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000198 InterPro:IPR001806 InterPro:IPR008936
Pfam:PF00071 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
GO:GO:0005525 GO:GO:0005737 GO:GO:0045892 GO:GO:0007264
GO:GO:0008360 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0015629
GO:GO:0030900 GO:GO:0043116 GO:GO:0043010 GO:GO:0001843
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
GeneTree:ENSGT00690000101648 OMA:LYRTRCS EMBL:FP103026
EMBL:FP102520 Ensembl:ENSSSCT00000003446 Uniprot:F1RM07
Length = 1501
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 55 DLLDRDEKEKLFNEHIEEL-TKKKREKFRELLN--ETSE-VTLSSSWKDIRKLIKEDPRY 110
DL+D E+L+ H+E+L ++KR + R ETS + L W++ R I + Y
Sbjct: 405 DLMDTVPAEQLYEAHLEKLRNERKRAEMRRAKENLETSPFILLEKPWEEARSFIMNEDFY 464
Query: 111 TKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIEE 169
S + + K AK EF+ELL E ++L L E + I++
Sbjct: 465 QWLEESVYM--DIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQD 521
Query: 170 ILRNDKRFLSLEHIPEERTQIILTYL 195
+L ++RF +L+ + ER +IL ++
Sbjct: 522 VLGEEQRFKALQKLQAERDALILKHI 547
>UNIPROTKB|Q8IIG7 [details] [associations]
symbol:PF11_0207 "Uncharacterized protein PF11_0207"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0016020
"membrane" evidence=NAS] GO:GO:0005737 GO:GO:0016020
eggNOG:NOG12793 EMBL:AE014186 HSSP:Q8NX77 RefSeq:XP_001347878.2
ProteinModelPortal:Q8IIG7 IntAct:Q8IIG7 MINT:MINT-1550464
GeneID:810754 KEGG:pfa:PF11_0207 EuPathDB:PlasmoDB:PF3D7_1120000
HOGENOM:HOG000282317 ProtClustDB:CLSZ2500892 Uniprot:Q8IIG7
Length = 1070
Score = 125 (49.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 42/189 (22%), Positives = 93/189 (49%)
Query: 3 ETDKDADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEK 62
E K+ K+ ++E ++E ++E++ + E+ E K +++++ + ++ + E+
Sbjct: 498 EEVKEEIKEIKEE--IKEVKEEIKEEIKEEIKEVK-EEIKEEIKEEIKEVKEEIKEVKEE 554
Query: 63 EKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPR--YTKFSSSDRRC 120
K E I+E+ ++ +E+ +E+ E E + K++++ IKE+ + + +
Sbjct: 555 IKEVKEEIKEVKEEIKEEIKEVKEEIKE-EIKEEIKEVKEEIKEEVKEEIKEVKEEIKEV 613
Query: 121 EREFKDYLKDKTSTAKAEFRELLQETKL-ISHKSLGLLHE-NENYLSEIEEILRNDKRFL 178
+ E K+ +K++ K E +E+ +E K I + E E EI+EI K +
Sbjct: 614 KEEIKEEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEVKEEIKEEIKEIKEELKNDI 673
Query: 179 SLEHIPEER 187
S E EE+
Sbjct: 674 SSETTKEEK 682
>ZFIN|ZDB-GENE-091116-95 [details] [associations]
symbol:si:dkey-217f16.1 "si:dkey-217f16.1"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR001401
Pfam:PF00350 ZFIN:ZDB-GENE-091116-95 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GeneTree:ENSGT00530000063016 EMBL:BX908804
IPI:IPI00972309 ProteinModelPortal:E7FAR3
Ensembl:ENSDART00000099242 Uniprot:E7FAR3
Length = 1834
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 49/192 (25%), Positives = 93/192 (48%)
Query: 10 KKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEH 69
+K +E +RE K + L ++ + K Q R + D+ L++R E E+ H
Sbjct: 65 EKMEEEREMREEMKRERERLKHETEQVKTEKEKLQTR--YNTDTDRLMNRIENER--ESH 120
Query: 70 IEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCEREFKDYLK 129
+E K++ E+F+E E + +S ++ KLI+E+ K D E+E K L
Sbjct: 121 DKE-RKRREEEFKER-KEQIKTQMSREREEWEKLIQEEK---KRREED---EKE-KQILD 171
Query: 130 DKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEILRNDKRFLSLEHIPEERTQ 189
++ K+E E+++E + + K L ++E L E E R D++ + EE +
Sbjct: 172 EQIQKLKSEMEEIIKEKEKLEIKKQEQLEDSEKRLKE-ERKTREDQQKTN-----EENLK 225
Query: 190 IILTYLDELEKR 201
++ + +EL++R
Sbjct: 226 LLEEHEEELKRR 237
>UNIPROTKB|P83509 [details] [associations]
symbol:ARHGAP35 "Rho GTPase-activating protein 35"
species:9615 "Canis lupus familiaris" [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0042478 "regulation of eye photoreceptor cell development"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR000198 InterPro:IPR001806
InterPro:IPR008936 Pfam:PF00071 Pfam:PF00620 PROSITE:PS50238
SMART:SM00324 GO:GO:0005525 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0007264 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0003677 GO:GO:0006351
GO:GO:0042478 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 eggNOG:NOG241832 GeneTree:ENSGT00690000101648
HOVERGEN:HBG051844 EMBL:AF483595 EMBL:AY079157 EMBL:AY079158
RefSeq:NP_001003022.1 UniGene:Cfa.60 ProteinModelPortal:P83509
SMR:P83509 STRING:P83509 Ensembl:ENSCAFT00000006727 GeneID:403543
KEGG:cfa:403543 CTD:2909 InParanoid:P83509 KO:K05732
OrthoDB:EOG4DZ1TC NextBio:20817053 Uniprot:P83509
Length = 1500
Score = 128 (50.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 55 DLLDRDEKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPR 109
DL+D E+L+ H+E+L ++KR + R E E +T W++ R I +
Sbjct: 405 DLMDTVPAEQLYEAHLEKLRNERKRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDF 464
Query: 110 YTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIE 168
Y S + + K AK EF+ELL E ++L L E + I+
Sbjct: 465 YQWLEESVYM--DIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQ 521
Query: 169 EILRNDKRFLSLEHIPEERTQIILTYL 195
++L ++RF +L+ + ER +IL ++
Sbjct: 522 DVLGEEQRFKALQKLQAERDALILKHI 548
Score = 38 (18.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 192 LTYLDELEKRGPP--PPPTASEPNRRL 216
LT + PP PPPT P + L
Sbjct: 1463 LTSTPVTSQPSPPQSPPPTPQSPMQAL 1489
>UNIPROTKB|Q5RE49 [details] [associations]
symbol:TCHP "Trichoplein keratin filament-binding protein"
species:9601 "Pongo abelii" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] GO:GO:0005739 GO:GO:0005886 GO:GO:0006915
GO:GO:0030308 GO:GO:0005856 HSSP:P01096 InterPro:IPR026773
PANTHER:PTHR31183 CTD:84260 HOVERGEN:HBG097262 EMBL:CR857688
RefSeq:NP_001124920.1 UniGene:Pab.12202 ProteinModelPortal:Q5RE49
PRIDE:Q5RE49 GeneID:100171790 KEGG:pon:100171790 InParanoid:Q5RE49
Uniprot:Q5RE49
Length = 498
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 58/200 (29%), Positives = 94/200 (47%)
Query: 1 MNETDKDADKKARQEASLREREKEVQRTLAVRNSEL--TWREAKRQLRKDHR-WDSADLL 57
M E +K +AR+E LR+ +E Q LA EL + +R++R+ HR SA
Sbjct: 72 MKE-EKRRSLEARRE-KLRQLMREEQDLLARELEELRLSMNLQERRIREQHRKLKSA--- 126
Query: 58 DRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSS 116
R+E+ KL E + E KK K RE+ + + + +SW + +K K+ T
Sbjct: 127 -REEQRKLIAEQLLYEHWKKNNPKLREMELDLHQKHVINSW-ETQKEEKKQQEATA-EEE 183
Query: 117 DRRCEREFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEI-LRNDK 175
++R E E++ ++ KAE E KL + L + E + L E+E L+ ++
Sbjct: 184 NKRYENEYERAQREALERMKAEEERRQLEDKLQAEALLQQMEELK--LKEVEATKLKKEQ 241
Query: 176 RFL-----SLEHIPEERTQI 190
L LE + EER Q+
Sbjct: 242 ENLLKQRWELERLEEERKQM 261
>UNIPROTKB|H9KZU2 [details] [associations]
symbol:ARHGAP35 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0043010
"camera-type eye development" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000198 InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238
SMART:SM00324 GO:GO:0007165 Gene3D:1.10.555.10 SUPFAM:SSF48350
GO:GO:0005622 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
GeneTree:ENSGT00690000101648 OMA:LYRTRCS EMBL:AADN02020429
Ensembl:ENSGALT00000019115 Uniprot:H9KZU2
Length = 1494
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 55 DLLDRDEKEKLFNEHIEEL-TKKKREKFRELLNETSE----VTLSSSWKDIRKLIKEDPR 109
D+++ E+L+ H+E L ++KR + R E E VT W++ R I +
Sbjct: 404 DVMETPAAEQLYEAHLERLRNERKRAEMRRAFQENLEASPFVTPGKPWEEARSFIMNEDF 463
Query: 110 YTKFSSSDRRCEREFKDYLKDKTSTAKAEFRELLQE-TKLISHKSLGLLHENENYLSEIE 168
Y + + K AK EF+ELL E ++L L E + I+
Sbjct: 464 YMWLEEPVYM--DIYGKHQKRIIERAKEEFQELLLEYSELFYELELDAKPSKEK-MGVIQ 520
Query: 169 EILRNDKRFLSLEHIPEERTQIILTYL 195
E+L ++RF +L+ + ER +IL ++
Sbjct: 521 EVLGEEQRFKALQKLQAERDALILKHI 547
>UNIPROTKB|Q9BT92 [details] [associations]
symbol:TCHP "Trichoplein keratin filament-binding protein"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006915 "apoptotic process"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045095 "keratin filament"
evidence=IDA] [GO:0045179 "apical cortex" evidence=IDA]
GO:GO:0005739 GO:GO:0005886 GO:GO:0005813 GO:GO:0006915
GO:GO:0030308 GO:GO:0045179 HSSP:P01096 GO:GO:0045095
eggNOG:NOG129785 InterPro:IPR026773 PANTHER:PTHR31183 CTD:84260
HOGENOM:HOG000006708 HOVERGEN:HBG097262 OrthoDB:EOG44BB2W
EMBL:AY007230 EMBL:AK092736 EMBL:BC004285 IPI:IPI00031104
RefSeq:NP_001137324.1 RefSeq:NP_115676.1 UniGene:Hs.410924
ProteinModelPortal:Q9BT92 IntAct:Q9BT92 MINT:MINT-1452298
STRING:Q9BT92 PhosphoSite:Q9BT92 DMDM:74733103 PaxDb:Q9BT92
PRIDE:Q9BT92 DNASU:84260 Ensembl:ENST00000312777
Ensembl:ENST00000405876 Ensembl:ENST00000544838 GeneID:84260
KEGG:hsa:84260 UCSC:uc001tpn.3 GeneCards:GC12P110338
HGNC:HGNC:28135 HPA:HPA038638 MIM:612654 neXtProt:NX_Q9BT92
PharmGKB:PA143485629 InParanoid:Q9BT92 OMA:TLPSYWC PhylomeDB:Q9BT92
ChiTaRS:TCHP GenomeRNAi:84260 NextBio:73786 ArrayExpress:Q9BT92
Bgee:Q9BT92 CleanEx:HS_TCHP Genevestigator:Q9BT92 Uniprot:Q9BT92
Length = 498
Score = 113 (44.8 bits), Expect = 0.00071, P = 0.00071
Identities = 56/200 (28%), Positives = 95/200 (47%)
Query: 1 MNETDKDADKKARQEASLREREKEVQRTLAVRNSEL--TWREAKRQLRKDH-RWDSADLL 57
M E +K +AR+E LR+ +E Q LA EL + +R++R+ H + SA
Sbjct: 72 MKE-EKRRSLEARRE-KLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSA--- 126
Query: 58 DRDEKEKLFNEHI-EELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSS 116
++E+ KL E + E KK K RE+ + + + +SW +++K K+ T
Sbjct: 127 -KEEQRKLIAEQLLYEHWKKNNPKLREMELDLHQKHVVNSW-EMQKEEKKQQEATA-EQE 183
Query: 117 DRRCEREFKDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEI-LRNDK 175
++R E E++ ++ KAE E KL + L + E + L E+E L+ ++
Sbjct: 184 NKRYENEYERARREALERMKAEEERRQLEDKLQAEALLQQMEELK--LKEVEATKLKKEQ 241
Query: 176 RFL-----SLEHIPEERTQI 190
L LE + EER Q+
Sbjct: 242 ENLLKQRWELERLEEERKQM 261
>DICTYBASE|DDB_G0270864 [details] [associations]
symbol:DDB_G0270864 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0270864 EMBL:AAFI02000005 ProtClustDB:CLSZ2847449
RefSeq:XP_645959.2 EnsemblProtists:DDB0305165 GeneID:8616903
KEGG:ddi:DDB_G0270864 eggNOG:NOG244368 InParanoid:Q55E22
OMA:SPNKFGG Uniprot:Q55E22
Length = 963
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 46/194 (23%), Positives = 90/194 (46%)
Query: 3 ETDK-DADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDE 61
E D+ + +KK RQE RE + E + L +RN +L + + +++ D L+++
Sbjct: 282 EQDRVNNEKKQRQE---RE-DAEHREKLRLRNEQLEKERQEIRDKEEQEKQEKDRLEKER 337
Query: 62 KEKLFNEHIEELTKKKREKFRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSSSDRRCE 121
+EKL + E+L K+++EKF++ E + ++ +L KE R + R +
Sbjct: 338 REKL-KQRNEQLDKERQEKFKKDQEEKQK-------QEQEQLEKEKQRKLELQEKKRLAD 389
Query: 122 REF---KDYLKDKTSTAKAEFRELLQETKLISHKSLGLLHENENYLSEIEEI-----LRN 173
+ K D+ + ++E + L +E +L K L L + + E + + L
Sbjct: 390 EQAAVAKKLENDRLAAEESENKRLTEEARLAEEKRLVELEKKRSEEEEAKRLAEEARLAE 449
Query: 174 DKRFLSLEHIPEER 187
+KR + EE+
Sbjct: 450 EKRLAEESRLAEEK 463
>DICTYBASE|DDB_G0285911 [details] [associations]
symbol:DDB_G0285911 "LIM-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
dictyBase:DDB_G0285911 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AAFI02000082 eggNOG:NOG257706
RefSeq:XP_637999.1 ProteinModelPortal:Q54MJ1
EnsemblProtists:DDB0233145 GeneID:8625350 KEGG:ddi:DDB_G0285911
InParanoid:Q54MJ1 OMA:CDSKFRE Uniprot:Q54MJ1
Length = 1061
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 47/182 (25%), Positives = 93/182 (51%)
Query: 20 EREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLFNEHIEELTKKKRE 79
ERE+ +++ L E R+ +RQ RK+ R D++ KE+ E T+KK +
Sbjct: 731 EREQRLKQQLEEEEKERLKRQEERQKRKEQR-------DKELKEEELRIEAERETRKKLK 783
Query: 80 KFRELLNETSEVTLSSSW-KDIRKLIKEDPRYTKFSSSDRRCEREFKDYLKDKTSTAKAE 138
+ REL + +V L K +++ +D +YT + +D E +D KD T + +
Sbjct: 784 EERELQFKKEQVQLLLERDKRVKEKQLKDQKYT-YKINDTELEHIVED--KDLTKEFEDK 840
Query: 139 FRE-LLQETKLISHKSLGL-LH-----ENENYLSEIEEILRND-KRFLSLEHIPEERTQI 190
RE L+++ + +L + LH E+EN + +++++ + +R + LE+ ++++
Sbjct: 841 LREHQLKKSTSFENNTLSVNLHVVDPDEDENNILQLKKLRELEIQREIELENQQQQQSNC 900
Query: 191 IL 192
IL
Sbjct: 901 IL 902
>TAIR|locus:2194894 [details] [associations]
symbol:PRP40A "pre-mRNA-processing protein 40A"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016592 "mediator complex" evidence=IDA] [GO:0008380 "RNA
splicing" evidence=IPI] [GO:0070063 "RNA polymerase binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0006355 GO:GO:0008380 GO:GO:0006351 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AC007915 GO:GO:0016592 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
EMBL:AC020576 KO:K12821 InterPro:IPR027237 PANTHER:PTHR11864:SF0
EMBL:AK316856 IPI:IPI00526992 IPI:IPI00548835 IPI:IPI00892236
IPI:IPI00900521 RefSeq:NP_001117438.1 RefSeq:NP_175113.2
UniGene:At.14888 UniGene:At.28268 HSSP:Q61051
ProteinModelPortal:B6EUA9 SMR:B6EUA9 PRIDE:B6EUA9
EnsemblPlants:AT1G44910.1 GeneID:841057 KEGG:ath:AT1G44910
TAIR:At1g44910 eggNOG:COG5104 OMA:WEKPLEL PhylomeDB:B6EUA9
ProtClustDB:CLSN2681520 Genevestigator:B6EUA9 Uniprot:B6EUA9
Length = 958
Score = 115 (45.5 bits), Expect = 0.00099, P = 0.00099
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 7 DADKKARQEASLREREKEVQRTLAVRNSELTWREAKRQLRKDHRWDSADLLDRDEKEKLF 66
+A+++ R++ RE ++ +S L W +A D R+ + D RD +E LF
Sbjct: 463 EAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDR-PRD-REDLF 520
Query: 67 NEHIEELTKKKREK-----------FRELLNETSEVTLSSSWKDIRKLIKEDPRYTKFSS 115
+ +I EL +K+REK +R+ L + + W+ I+ +++D R +
Sbjct: 521 DNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEK 580
Query: 116 SDRRCEREFKDYLKD 130
DR F++Y+ D
Sbjct: 581 IDRLIG--FEEYILD 593
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.130 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 242 242 0.00096 113 3 11 23 0.39 34
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 603 (64 KB)
Total size of DFA: 187 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.40u 0.08s 36.48t Elapsed: 00:00:50
Total cpu time: 36.40u 0.08s 36.48t Elapsed: 00:00:51
Start: Thu Aug 15 14:08:15 2013 End: Thu Aug 15 14:09:06 2013