Query psy9284
Match_columns 82
No_of_seqs 156 out of 916
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 23:32:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3edh_A Bone morphogenetic prot 100.0 4.9E-33 1.7E-37 187.4 6.7 80 2-81 111-192 (201)
2 3lqb_A Hatching enzyme, LOC792 100.0 1.2E-31 4E-36 180.7 6.7 74 2-81 117-192 (199)
3 3lq0_A Proastacin; metallopept 100.0 1.3E-31 4.5E-36 184.2 5.4 77 2-81 144-223 (235)
4 4gwm_A Meprin A subunit beta; 100.0 2.1E-30 7.3E-35 196.1 5.8 79 2-81 148-226 (592)
5 3h51_A Putative calcium/calmod 26.4 22 0.00074 21.1 0.9 11 38-48 2-12 (156)
6 1ic9_A TH10AOX; three stranded 18.0 23 0.0008 15.9 -0.2 15 44-59 8-22 (29)
7 4gl6_A Hypothetical protein; s 17.3 39 0.0013 22.1 0.7 19 31-50 211-229 (247)
8 1taf_B TFIID TBP associated fa 15.0 48 0.0016 18.1 0.6 15 68-82 53-67 (70)
9 1hv5_A Stromelysin 3; inhibiti 12.6 85 0.0029 19.2 1.4 13 33-45 129-141 (165)
10 3n2f_G Na+/K+ ATPase gamma sub 11.6 41 0.0014 15.6 -0.3 8 33-40 3-10 (31)
No 1
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=99.98 E-value=4.9e-33 Score=187.45 Aligned_cols=80 Identities=35% Similarity=0.610 Sum_probs=73.6
Q ss_pred CceEEEecCCCcccccccceecCCCCcccCCCCccccccCCCCCcccccCCCcceEEeCCC--CCccCCCcCCCCCHHHH
Q psy9284 2 SLTCQVLTENIGPGHEFNLERRPAGSVRTFSMPYDYGSIMHYSGIAFSKDGVSKTIVPLYP--GAEDTMGQRDAMSRVDQ 79 (82)
Q Consensus 2 D~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SvMHY~~~afs~~~~~~Ti~~~~~--~~~~~iGqr~~lS~~Di 79 (82)
|+||+|+|+||.|+.++||.|+....++++|+||||+|||||+++|||++..+|||+|+.+ +.+..||||.+||+.||
T Consensus 111 D~yV~I~~~ni~~~~~~nF~k~~~~~~~~~g~~YDy~SvMHY~~~aFs~~~~~~Ti~p~~~~~~~~~~iGqr~~lS~~Di 190 (201)
T 3edh_A 111 DRHVSIVRENIQPGQEYNFLKMEPQEVESLGETYDFDSIMHYARNTFSRGIFLDTIVPKYEVNGVKPPIGQRTRLSKGDI 190 (201)
T ss_dssp GGTEEECGGGBCTTCGGGGCCCCGGGBCCTTCCCCTTCTTCCCTTTTBSSTTSCSEEESSCBTTBCCCCCCCSSCCHHHH
T ss_pred CcEEEEehhccCcchhHhhhcCChhhccccCCccCCCCcccCCCccccCCCCCCceEeCCCCCcccccCcccCCCCHHHH
Confidence 8999999999999999999999998889999999999999999999999855599999865 34458999999999999
Q ss_pred hc
Q psy9284 80 KR 81 (82)
Q Consensus 80 ~k 81 (82)
+|
T Consensus 191 ~~ 192 (201)
T 3edh_A 191 AQ 192 (201)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 2
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=99.97 E-value=1.2e-31 Score=180.70 Aligned_cols=74 Identities=35% Similarity=0.680 Sum_probs=67.7
Q ss_pred CceEEEecCCCcccccccceecCCCCcccCCCCccccccCCCCCcccccC-CCcceEEeCC-CCCccCCCcCCCCCHHHH
Q psy9284 2 SLTCQVLTENIGPGHEFNLERRPAGSVRTFSMPYDYGSIMHYSGIAFSKD-GVSKTIVPLY-PGAEDTMGQRDAMSRVDQ 79 (82)
Q Consensus 2 D~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SvMHY~~~afs~~-~~~~Ti~~~~-~~~~~~iGqr~~lS~~Di 79 (82)
|+||+|+|+||.|+.++||.|+.. .++|+||||+|||||+++|||+| ++ |||+|+. +.. .||||.+||+.||
T Consensus 117 D~yV~I~~~nI~~~~~~nF~k~~~---~~~~~pYDy~SvMHY~~~aFs~n~g~-~Ti~~~~~~~~--~iGqr~~lS~~Di 190 (199)
T 3lqb_A 117 DQYVRINWNNISPGMAYNFLKQKT---NNQNTPYDYGSLMHYGKTAFAIQPGL-ETITPIPDENV--QIGQRQGLSKIDI 190 (199)
T ss_dssp GGTEEECGGGBCTTCGGGGCCCCB---CCTTCCCCTTCTTCCCTTTTBSSTTC-CSEEESSCTTS--CCCCCSSCCHHHH
T ss_pred CceEEeehhhcCcchhhhcccccc---cccCCcCCCCcccCCCCcccccCCCC-CeEEECCCCCC--CcccccCCCHHHH
Confidence 899999999999999999999863 68999999999999999999999 66 9999983 443 8999999999999
Q ss_pred hc
Q psy9284 80 KR 81 (82)
Q Consensus 80 ~k 81 (82)
+|
T Consensus 191 ~~ 192 (199)
T 3lqb_A 191 LR 192 (199)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 3
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=99.97 E-value=1.3e-31 Score=184.20 Aligned_cols=77 Identities=23% Similarity=0.299 Sum_probs=70.6
Q ss_pred CceEEEecCCCcccccccceecCCCCcccCCCCccccccCCCCCcccccC-CCcceEEeC-CCCC-ccCCCcCCCCCHHH
Q psy9284 2 SLTCQVLTENIGPGHEFNLERRPAGSVRTFSMPYDYGSIMHYSGIAFSKD-GVSKTIVPL-YPGA-EDTMGQRDAMSRVD 78 (82)
Q Consensus 2 D~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SvMHY~~~afs~~-~~~~Ti~~~-~~~~-~~~iGqr~~lS~~D 78 (82)
|+||+|+|+||.++.++||.|+... +++|+||||+|||||+++|||+| +. |||+|+ +++. +..||||.+||+.|
T Consensus 144 D~yV~I~~~nI~~~~~~nF~k~~~~--~~~g~pYDy~SvMHY~~~aFs~n~g~-~Ti~~~~~~~~~~~~iGqr~~lS~~D 220 (235)
T 3lq0_A 144 DNYVTINYQNVDPSMTSNFDIDTYS--RYVGEDYQYYSIMHYGKYSFSIQWGV-LETIVPLQNGIDLTDPYDKAHMLQTD 220 (235)
T ss_dssp GGTEEECGGGBCTTSGGGGCCCTTS--CCCCSCCCTTCTTCCCTTTTBTTTTT-SCSEEESSTTCCCCCGGGCSSCCHHH
T ss_pred cceeEeehhccCcchHHHhccCCcc--ccCCCcCCCCcccCCCCcccccCCCC-CcEEECCCCCcccccccccCCCCHHH
Confidence 8999999999999999999999876 78999999999999999999999 66 999997 5554 46899999999999
Q ss_pred Hhc
Q psy9284 79 QKR 81 (82)
Q Consensus 79 i~k 81 (82)
|+|
T Consensus 221 i~~ 223 (235)
T 3lq0_A 221 ANQ 223 (235)
T ss_dssp HHH
T ss_pred HHH
Confidence 987
No 4
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.96 E-value=2.1e-30 Score=196.10 Aligned_cols=79 Identities=32% Similarity=0.468 Sum_probs=70.2
Q ss_pred CceEEEecCCCcccccccceecCCCCcccCCCCccccccCCCCCcccccCCCcceEEeCCCCCccCCCcCCCCCHHHHhc
Q psy9284 2 SLTCQVLTENIGPGHEFNLERRPAGSVRTFSMPYDYGSIMHYSGIAFSKDGVSKTIVPLYPGAEDTMGQRDAMSRVDQKR 81 (82)
Q Consensus 2 D~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SvMHY~~~afs~~~~~~Ti~~~~~~~~~~iGqr~~lS~~Di~k 81 (82)
|+||+|+|+||.++.++||+|+....++++|+||||+|||||+++|||++++ |||+|+.+.....||||.+||+.||+|
T Consensus 148 D~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SVMHY~~~aFs~~~~-~Ti~~~~~~~~~~iGqr~~lS~~Di~~ 226 (592)
T 4gwm_A 148 DDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTE-PTIVTRISDFEDVIGQRMDFSDSDLLK 226 (592)
T ss_dssp GGTEEECGGGBCTTCGGGGCCCCC------CCCCCTTCTTSCCTTTTBSSSS-CSEEESSGGGTTTTTCCSSCCHHHHHH
T ss_pred cceEEEehhhcCcchhhHHhhcCccccccCCCCcCCCccCcCCCCccccCCc-ceEEecCCCccCCccccccCcHHHHHH
Confidence 8999999999999999999999998889999999999999999999999998 999999887777899999999999986
No 5
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=26.36 E-value=22 Score=21.11 Aligned_cols=11 Identities=45% Similarity=0.842 Sum_probs=7.3
Q ss_pred cccCCCCCccc
Q psy9284 38 GSIMHYSGIAF 48 (82)
Q Consensus 38 ~SvMHY~~~af 48 (82)
+-||||...+=
T Consensus 2 ~~~~~~~~~a~ 12 (156)
T 3h51_A 2 GGVMHYTDKAA 12 (156)
T ss_dssp -CCCCCCSCCC
T ss_pred CccceeecccC
Confidence 45889887653
No 6
>1ic9_A TH10AOX; three stranded antiparallel beta-sheet mini-protein motif de novo protein design; HET: DPR DAL; NMR {Synthetic} SCOP: k.26.1.1 PDB: 1ico_A* 1icl_A*
Probab=18.02 E-value=23 Score=15.87 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=9.4
Q ss_pred CCcccccCCCcceEEe
Q psy9284 44 SGIAFSKDGVSKTIVP 59 (82)
Q Consensus 44 ~~~afs~~~~~~Ti~~ 59 (82)
+++.|.-.|. ||+.|
T Consensus 8 psytfrgpgc-ptlkp 22 (29)
T 1ic9_A 8 PSYTFRGPGC-PTLKP 22 (29)
T ss_dssp TTEEEECSCC-CCCCT
T ss_pred cceeecCCCC-Ccccc
Confidence 4566766665 77654
No 7
>4gl6_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS biology; 2.55A {Ruminococcus gnavus}
Probab=17.32 E-value=39 Score=22.15 Aligned_cols=19 Identities=37% Similarity=0.796 Sum_probs=15.1
Q ss_pred CCCCccccccCCCCCccccc
Q psy9284 31 FSMPYDYGSIMHYSGIAFSK 50 (82)
Q Consensus 31 ~g~pYDy~SvMHY~~~afs~ 50 (82)
-|.|| ++-||.|++..|..
T Consensus 211 e~qpy-fgtimr~~s~~fdd 229 (247)
T 4gl6_A 211 EGQPY-FGTIMRYGSDKFDD 229 (247)
T ss_dssp TTSCE-EEEEECTTCSSCSS
T ss_pred cCCCc-eeeeeecCCccccc
Confidence 35677 78999999999854
No 8
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=14.98 E-value=48 Score=18.09 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=10.4
Q ss_pred CCcCCCCCHHHHhcC
Q psy9284 68 MGQRDAMSRVDQKRG 82 (82)
Q Consensus 68 iGqr~~lS~~Di~k~ 82 (82)
.+.|..|+..||..|
T Consensus 53 HakRk~Lt~~DI~~A 67 (70)
T 1taf_B 53 HAKRQKLSVRDIDMS 67 (70)
T ss_dssp HTTCSSBCHHHHHHH
T ss_pred HcCCCeecHHHHHHH
Confidence 355777888888654
No 9
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=12.63 E-value=85 Score=19.17 Aligned_cols=13 Identities=8% Similarity=-0.217 Sum_probs=9.2
Q ss_pred CCccccccCCCCC
Q psy9284 33 MPYDYGSIMHYSG 45 (82)
Q Consensus 33 ~pYDy~SvMHY~~ 45 (82)
-+-+..|||||..
T Consensus 129 H~~~~~svM~~~~ 141 (165)
T 1hv5_A 129 HTTAAKALMSPFY 141 (165)
T ss_dssp CCSCTTSTTCSSC
T ss_pred CCCCCCceecccc
Confidence 3456789999863
No 10
>3n2f_G Na+/K+ ATPase gamma subunit transcript variant A; sodium-potassium pump, P-type ATPase, cardiotonic steroids,; HET: PHD; 4.10A {Sus scrofa} PDB: 3n23_G*
Probab=11.64 E-value=41 Score=15.61 Aligned_cols=8 Identities=38% Similarity=0.941 Sum_probs=4.9
Q ss_pred CCcccccc
Q psy9284 33 MPYDYGSI 40 (82)
Q Consensus 33 ~pYDy~Sv 40 (82)
.+|||.|+
T Consensus 3 F~yDy~tL 10 (31)
T 3n2f_G 3 FYYDYETV 10 (31)
T ss_dssp CCCCHHHH
T ss_pred CCCChHHH
Confidence 35777654
Done!