Query psy929
Match_columns 483
No_of_seqs 321 out of 2961
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 23:40:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1.5E-37 5.2E-42 327.9 17.3 200 66-265 28-240 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 9.1E-35 3.1E-39 305.8 17.7 196 67-263 37-239 (500)
3 3vw7_A Proteinase-activated re 100.0 6.9E-35 2.4E-39 304.3 13.6 199 66-264 16-222 (484)
4 3uon_A Human M2 muscarinic ace 100.0 1.3E-33 4.4E-38 293.1 18.8 200 67-266 20-222 (467)
5 3odu_A C-X-C chemokine recepto 100.0 4E-33 1.4E-37 292.2 18.3 197 64-264 42-243 (502)
6 3v2y_A Sphingosine 1-phosphate 100.0 8.3E-33 2.8E-37 292.3 20.1 191 65-261 58-250 (520)
7 2ks9_A Substance-P receptor; w 100.0 3.1E-32 1.1E-36 273.8 21.8 235 66-356 28-270 (364)
8 4dkl_A MU-type opioid receptor 100.0 1.1E-32 3.7E-37 285.7 17.9 196 67-265 14-216 (464)
9 1u19_A Rhodopsin; G protein-co 100.0 1.7E-32 5.7E-37 273.6 17.2 234 66-356 34-275 (349)
10 4amj_A Beta-1 adrenergic recep 100.0 1.1E-32 3.8E-37 270.4 15.1 239 68-356 9-254 (315)
11 3rze_A Histamine H1 receptor, 100.0 4.6E-33 1.6E-37 287.7 13.0 195 70-265 8-206 (452)
12 3eml_A Human adenosine A2A rec 100.0 2.7E-32 9.3E-37 284.5 18.6 196 69-266 20-228 (488)
13 2z73_A Rhodopsin; visual pigme 100.0 1.2E-31 3.9E-36 277.8 22.8 249 64-356 28-283 (448)
14 3pbl_A D(3) dopamine receptor, 100.0 1.6E-32 5.6E-37 286.0 16.1 190 69-263 37-230 (481)
15 4eiy_A Adenosine receptor A2A/ 100.0 5.1E-32 1.8E-36 279.4 17.6 198 66-265 27-237 (447)
16 4ea3_A Fusion protein of nocic 100.0 1.3E-31 4.5E-36 276.5 20.4 232 66-356 121-359 (434)
17 2lnl_A C-X-C chemokine recepto 100.0 1.6E-31 5.6E-36 261.2 19.8 224 67-358 8-238 (296)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 7.4E-32 2.5E-36 284.5 16.8 260 67-357 179-445 (514)
19 1hll_A Alpha-2A adrenergic rec 98.3 9.5E-08 3.2E-12 59.6 0.3 30 156-185 2-31 (32)
20 2ki9_A Cannabinoid receptor 2; 97.5 2.7E-05 9.3E-10 48.6 0.9 28 329-356 1-28 (33)
21 2lot_A Apelin receptor; membra 96.1 0.00031 1.1E-08 50.5 -2.6 30 72-101 30-59 (64)
22 3uon_A Human M2 muscarinic ace 92.6 1.2 4.1E-05 44.6 13.1 35 325-359 379-413 (467)
23 3eml_A Human adenosine A2A rec 88.2 0.71 2.4E-05 46.5 6.7 36 323-358 384-419 (488)
24 4ea3_A Fusion protein of nocic 86.1 0.16 5.6E-06 51.0 0.4 69 299-368 340-408 (434)
25 2rh1_A Beta-2-adrenergic recep 84.4 1.6 5.4E-05 44.6 7.0 34 326-359 400-433 (500)
26 3pbl_A D(3) dopamine receptor, 78.6 0.66 2.3E-05 46.8 1.5 31 328-358 395-425 (481)
27 2z73_A Rhodopsin; visual pigme 72.9 13 0.00046 36.6 9.5 68 300-370 265-332 (448)
28 3sn6_R Lysozyme, beta-2 adrene 70.8 0.35 1.2E-05 49.7 -3.0 63 301-368 427-489 (514)
29 4grv_A Neurotensin receptor ty 68.2 0.099 3.4E-06 54.0 -7.9 34 324-357 399-432 (510)
30 3v2y_A Sphingosine 1-phosphate 67.2 0.17 6E-06 52.2 -6.3 32 326-357 413-444 (520)
31 4dkl_A MU-type opioid receptor 65.8 2.8 9.5E-05 41.7 2.6 34 325-358 374-407 (464)
32 3rze_A Histamine H1 receptor, 62.3 3.1 0.00011 41.2 2.1 32 327-358 366-397 (452)
33 4eiy_A Adenosine receptor A2A/ 58.2 1.1 3.7E-05 44.6 -2.1 36 323-358 343-378 (447)
34 2lnl_A C-X-C chemokine recepto 54.5 1.6 5.5E-05 40.8 -1.5 71 299-369 217-293 (296)
35 3vw7_A Proteinase-activated re 45.6 0.84 2.9E-05 46.0 -5.4 35 324-358 380-414 (484)
36 3odu_A C-X-C chemokine recepto 39.0 0.58 2E-05 47.5 -7.9 22 335-356 414-435 (502)
37 2ks9_A Substance-P receptor; w 33.2 2 7E-05 41.3 -4.7 71 299-369 251-321 (364)
38 2rdd_B UPF0092 membrane protei 32.1 59 0.002 20.0 3.7 20 240-259 6-26 (37)
39 4amj_A Beta-1 adrenergic recep 29.7 3.7 0.00013 38.1 -3.4 64 300-368 236-299 (315)
40 1u19_A Rhodopsin; G protein-co 21.5 7.5 0.00026 36.7 -3.0 66 300-368 257-322 (349)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-37 Score=327.93 Aligned_cols=200 Identities=25% Similarity=0.369 Sum_probs=166.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccch
Q psy929 66 SPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLR---RPCNYLLVSLAVSDLCVAILVMPMALLYEVS--GKWNFGF 140 (483)
Q Consensus 66 ~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lr---t~~~ill~nLavaDll~~~~~~p~~i~~~~~--~~~~~~~ 140 (483)
+....++++++|++++++|++||+++++++.++|++| +++|+|++|||+||++++++.+|+.+..... +.|.+|+
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~ 107 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGD 107 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhH
Confidence 4456788899999999999999999999999876544 7889999999999999999999998877653 4799999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCC---
Q psy929 141 MMCNLWVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDN--- 217 (483)
Q Consensus 141 ~~C~~~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~--- 217 (483)
.+|++..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++.++......+
T Consensus 108 ~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~ 187 (510)
T 4grv_A 108 AGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTH 187 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999887653322221
Q ss_pred -Ccccccccccc----hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy929 218 -GVSFCSVCQNY----GYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEK 265 (483)
Q Consensus 218 -~~~~C~~~~~~----~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~ 265 (483)
....|...++. .|..+.+++.|++|+++|+++|++|++.++++.+...
T Consensus 188 ~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~ 240 (510)
T 4grv_A 188 PGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFE 240 (510)
T ss_dssp GGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHH
T ss_pred CCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 22245444332 3555556677999999999999999999998765443
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=9.1e-35 Score=305.82 Aligned_cols=196 Identities=31% Similarity=0.615 Sum_probs=166.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHH
Q psy929 67 PLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLW 146 (483)
Q Consensus 67 ~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~ 146 (483)
....+++++++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.....+.|.+|...|++.
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~ 116 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFW 116 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHH
Confidence 44567788999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccc----
Q psy929 147 VSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFC---- 222 (483)
Q Consensus 147 ~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C---- 222 (483)
.++..++..+|++++++||+|||+||++|++|+.+++++++..+++++|++++++++++++...... .......|
T Consensus 117 ~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~~~ 195 (500)
T 2rh1_A 117 TSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEE 195 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceecccc
Confidence 9999999999999999999999999999999999999999999999999999999965544321111 11111122
Q ss_pred ---cccccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHH
Q psy929 223 ---SVCQNYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAE 263 (483)
Q Consensus 223 ---~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~ 263 (483)
.......|.+..+++.|++|+++|+++|++|++.++|+.++
T Consensus 196 ~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 196 TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp TCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12223456666777789999999999999999999987655
No 3
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=304.27 Aligned_cols=199 Identities=20% Similarity=0.281 Sum_probs=162.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHH
Q psy929 66 SPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNL 145 (483)
Q Consensus 66 ~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 145 (483)
.+....++.+++++++++|++||+++++++.+++++|+++|+|++|||++|+++++...+..+.....+.|.+|...|++
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhH
Confidence 34566778899999999999999999999999999999999999999999999975544444444444589999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCccccccc
Q psy929 146 WVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSVC 225 (483)
Q Consensus 146 ~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~~ 225 (483)
..++..++..+|++++++||+|||+||++|++|+..++.+++..+++++|++++++++|+++.+............|...
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~ 175 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDV 175 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999987665333334445567654
Q ss_pred ccch--------hhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHH
Q psy929 226 QNYG--------YQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEE 264 (483)
Q Consensus 226 ~~~~--------~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~ 264 (483)
+... |.+..+++.+++|+++|+++|++|++.++++.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~ 222 (484)
T 3vw7_A 176 LSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIF 222 (484)
T ss_dssp CSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHH
T ss_pred CCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHH
Confidence 4321 44455577799999999999999999999876543
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.3e-33 Score=293.12 Aligned_cols=200 Identities=31% Similarity=0.550 Sum_probs=173.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHH
Q psy929 67 PLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLW 146 (483)
Q Consensus 67 ~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~ 146 (483)
.....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.....+.|.+|...|++.
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhcccc-ccCCCccccccc
Q psy929 147 VSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDY-REDNGVSFCSVC 225 (483)
Q Consensus 147 ~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~-~~~~~~~~C~~~ 225 (483)
.++..++..+|++++++||+|||+||++|++|+..++.+++..+++++|++++++++|+++.+.... ........|...
T Consensus 100 ~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 179 (467)
T 3uon_A 100 LALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQ 179 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceee
Confidence 9999999999999999999999999999999999999999999999999999999999987654211 122333456544
Q ss_pred c--cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHh
Q psy929 226 Q--NYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKR 266 (483)
Q Consensus 226 ~--~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~ 266 (483)
+ ...|.+..+++.+++|+++|+++|++|++.++++.++.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~ 222 (467)
T 3uon_A 180 FFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEM 222 (467)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3 2345566677789999999999999999999988655443
No 5
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=4e-33 Score=292.25 Aligned_cols=197 Identities=23% Similarity=0.350 Sum_probs=168.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhH
Q psy929 64 PYSPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMC 143 (483)
Q Consensus 64 ~~~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C 143 (483)
+.......++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++++ +.+|..+..... +|.+|...|
T Consensus 42 ~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C 119 (502)
T 3odu_A 42 ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLC 119 (502)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhh
Confidence 345567788999999999999999999999999999999999999999999999995 688888776655 799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCccccc
Q psy929 144 NLWVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCS 223 (483)
Q Consensus 144 ~~~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~ 223 (483)
++..++..++..+|++++++||+|||+||++|++|+..++.+++..+++++|++++++++|+++.... ........|.
T Consensus 120 ~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~--~~~~~~~~C~ 197 (502)
T 3odu_A 120 KAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANV--SEADDRYICD 197 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEE--EECSSSEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheee--eccCCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999998776542 2233445575
Q ss_pred ccccc-----hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHH
Q psy929 224 VCQNY-----GYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEE 264 (483)
Q Consensus 224 ~~~~~-----~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~ 264 (483)
..+.. .|.+..+++.+++|+++|+++|++|++.++|+.++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 198 RFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI 243 (502)
T ss_dssp ECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred ecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 43322 344455667789999999999999999999875543
No 6
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=8.3e-33 Score=292.34 Aligned_cols=191 Identities=19% Similarity=0.278 Sum_probs=158.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHH
Q psy929 65 YSPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCN 144 (483)
Q Consensus 65 ~~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~ 144 (483)
.+.....++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.. ....|.++...|+
T Consensus 58 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~ 136 (520)
T 3v2y_A 58 DKENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWF 136 (520)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccc
Confidence 344555788899999999999999999999999999999999999999999999998888887666 5567899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccccc
Q psy929 145 LWVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSV 224 (483)
Q Consensus 145 ~~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~ 224 (483)
+..++..++.++|++++++||+|||+||+ |++|+..++++++..+++++|++++++++|+++.+... .+...|..
T Consensus 137 ~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~----~~~~~C~~ 211 (520)
T 3v2y_A 137 LREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI----SALSSCST 211 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT----TCGGGBCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc----cCCCcccc
Confidence 99999999999999999999999999999 99999999999999999999999999999998765422 34456766
Q ss_pred ccc--chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q psy929 225 CQN--YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIV 261 (483)
Q Consensus 225 ~~~--~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~ 261 (483)
.+. ..++....++.|++|+++|++||.+|++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 212 VLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp SSTTBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 543 2233334455699999999999999999999875
No 7
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=3.1e-32 Score=273.77 Aligned_cols=235 Identities=20% Similarity=0.321 Sum_probs=190.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHH
Q psy929 66 SPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNL 145 (483)
Q Consensus 66 ~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 145 (483)
+..+..+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.+|+..|++
T Consensus 28 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 107 (364)
T 2ks9_A 28 PAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKF 107 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHh
Confidence 33445566889999999999999999999999999999999999999999999998899998888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCccccccc
Q psy929 146 WVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSVC 225 (483)
Q Consensus 146 ~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~~ 225 (483)
..++..++..+|++++++||+|||+||++|++|+ .+++++..+++++|+++++.++|.++... .........|...
T Consensus 108 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~--~~~~~~~~~C~~~ 183 (364)
T 2ks9_A 108 HNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYST--TETMPSRVVCMIE 183 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSC--CCBCTTCSSBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhh--heecCCCCEEeec
Confidence 9999999999999999999999999999999985 58888999999999999999998754322 2223334456543
Q ss_pred cc--------chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCcccc
Q psy929 226 QN--------YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTHR 297 (483)
Q Consensus 226 ~~--------~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (483)
+. ..|.+...++.+++|+++++++|.+|++.++++..+... .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~------------------~------------ 233 (364)
T 2ks9_A 184 WPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS------------------S------------ 233 (364)
T ss_dssp CSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS------------------S------------
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------------------c------------
Confidence 32 134455566778999999999999999988753210000 0
Q ss_pred ccccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhh
Q psy929 298 TSTTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 298 ~~~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~ 356 (483)
...++..++++|++|++.+++++|++||+|+.+..++
T Consensus 234 ----------------------~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~ 270 (364)
T 2ks9_A 234 ----------------------DRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLL 270 (364)
T ss_dssp ----------------------SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------hhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0002345668899999999999999999999888766
No 8
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=1.1e-32 Score=285.74 Aligned_cols=196 Identities=23% Similarity=0.433 Sum_probs=168.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHH
Q psy929 67 PLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLW 146 (483)
Q Consensus 67 ~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~ 146 (483)
....+++.+++++++++|++||+++++++.+++++|+++|+|++|||++|+++++. +|..+.....+.|.+|...|++.
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhH
Confidence 34567788999999999999999999999999999999999999999999999765 88888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccccccc
Q psy929 147 VSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSVCQ 226 (483)
Q Consensus 147 ~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~~~ 226 (483)
.++..++..+|++++++||+|||+||++|++|+.+++++++..+++++|++++++++|.++.... .+......|...+
T Consensus 93 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~--~~~~~~~~c~~~~ 170 (464)
T 4dkl_A 93 ISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATT--KYRQGSIDCTLTF 170 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCC--EEETTEEECCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheee--cccCCCceEEeec
Confidence 99999999999999999999999999999999999999999999999999999999998764432 2223444554433
Q ss_pred c-------chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy929 227 N-------YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEK 265 (483)
Q Consensus 227 ~-------~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~ 265 (483)
. ..|.+..+++.+++|+++|+++|++|++.++++.+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~ 216 (464)
T 4dkl_A 171 SHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFE 216 (464)
T ss_dssp SSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 2 23455566777999999999999999999987765443
No 9
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.7e-32 Score=273.57 Aligned_cols=234 Identities=24% Similarity=0.384 Sum_probs=194.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHH
Q psy929 66 SPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNL 145 (483)
Q Consensus 66 ~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 145 (483)
++....++++++.+++++|++||+++++++.+++++|+++|++++|||++|++.++..+|..+.....+.|.++...|++
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 113 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNL 113 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHH
Confidence 45566778899999999999999999999999999999999999999999999999889998888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCccccccc
Q psy929 146 WVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSVC 225 (483)
Q Consensus 146 ~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~~ 225 (483)
..++..++..+|++++++|++|||+||++|++|+. .+++++..+++++|+++++.++|+++.+.. +..+.....|...
T Consensus 114 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~-~~~~~~~~~C~~~ 191 (349)
T 1u19_A 114 EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSR-YIPEGMQCSCGID 191 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSC-CEEETTTTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheee-eeccCCceeeccc
Confidence 99999999999999999999999999999999876 788999999999999999999998776542 2222333355433
Q ss_pred c--------cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCcccc
Q psy929 226 Q--------NYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTHR 297 (483)
Q Consensus 226 ~--------~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (483)
+ ...|.....++.+++|+++++++|.+|++.++++.++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~-------------------------------- 239 (349)
T 1u19_A 192 YYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ-------------------------------- 239 (349)
T ss_dssp CSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC--------------------------------
T ss_pred ccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------------------------------
Confidence 2 123555566677899999999999999988876531100
Q ss_pred ccccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhh
Q psy929 298 TSTTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 298 ~~~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~ 356 (483)
..+...++++|++|++.+++++|++||+|+.+..+.
T Consensus 240 -----------------------~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~ 275 (349)
T 1u19_A 240 -----------------------ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY 275 (349)
T ss_dssp -----------------------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 001244567889999999999999999999887665
No 10
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=1.1e-32 Score=270.43 Aligned_cols=239 Identities=32% Similarity=0.531 Sum_probs=195.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHHH
Q psy929 68 LQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLWV 147 (483)
Q Consensus 68 ~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~ 147 (483)
....+..+++.+++++|++||+++++++.+++++|+++|++++|||++|++.+++.+|..+.....+.|.+|+..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 45567888999999999999999999999999999999999999999999998889999888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccc-----
Q psy929 148 SFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFC----- 222 (483)
Q Consensus 148 ~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C----- 222 (483)
++..++..+|++++++||+|||+||++|++|+...+++++..+++++|+++++.++++.+...... .......|
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~ 167 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRD-EDPQALKCYQDPG 167 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccc-cCCCccccccccc
Confidence 999999999999999999999999999999998899999999999999999999988876543211 11111122
Q ss_pred --cccccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCccccccc
Q psy929 223 --SVCQNYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTHRTST 300 (483)
Q Consensus 223 --~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (483)
.......|.....++.+++|+++++++|.+|++.++++.++.++.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~----------------------------- 218 (315)
T 4amj_A 168 CCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRK----------------------------- 218 (315)
T ss_dssp CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC----------------------------------------
T ss_pred cchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc-----------------------------
Confidence 2223345666677778999999999999999999988654332211110
Q ss_pred cccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhh
Q psy929 301 TSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 301 ~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~ 356 (483)
.++...++++|++|++.+++++|++||+|+.+..+.
T Consensus 219 --------------------~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~ 254 (315)
T 4amj_A 219 --------------------TSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIV 254 (315)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 113345678899999999999999999999998877
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=287.69 Aligned_cols=195 Identities=30% Similarity=0.476 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHHHHH
Q psy929 70 ALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLWVSF 149 (483)
Q Consensus 70 ~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~l 149 (483)
..++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.+|...|++..++
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 87 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSM 87 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccc--cCCCccccccccc
Q psy929 150 DVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYR--EDNGVSFCSVCQN 227 (483)
Q Consensus 150 ~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~--~~~~~~~C~~~~~ 227 (483)
..++..+|++++++||+|||++|++|++|+..++.+++..+++++|++++++++|.+. +..... .......|...+.
T Consensus 88 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~~~C~~~~~ 166 (452)
T 3rze_A 88 DYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILG-WNHFMQQTSVRREDKCETDFY 166 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHC-CCC-------CCSSSSCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHhcccccccCCCCeecCCCc
Confidence 9999999999999999999999999999999999999999999999999999888543 221111 1123445644332
Q ss_pred --chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy929 228 --YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEK 265 (483)
Q Consensus 228 --~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~ 265 (483)
..|.++.+++.+++|+++|+++|++|++.++++.++..
T Consensus 167 ~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~ 206 (452)
T 3rze_A 167 DVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFE 206 (452)
T ss_dssp TCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34556667778999999999999999999998765543
No 12
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.98 E-value=2.7e-32 Score=284.55 Aligned_cols=196 Identities=29% Similarity=0.438 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHHHH
Q psy929 69 QALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLWVS 148 (483)
Q Consensus 69 ~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~ 148 (483)
...++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.... .|.++...|++..+
T Consensus 20 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~ 97 (488)
T 3eml_A 20 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIAC 97 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHH
Confidence 3456778899999999999999999999999999999999999999999999999998776443 68889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhcccccc---CCCccccccc
Q psy929 149 FDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYRE---DNGVSFCSVC 225 (483)
Q Consensus 149 l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~---~~~~~~C~~~ 225 (483)
+..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++.+...... ......|...
T Consensus 98 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 177 (488)
T 3eml_A 98 FVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEG 177 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999998765422111 1122334332
Q ss_pred cc----------chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHh
Q psy929 226 QN----------YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKR 266 (483)
Q Consensus 226 ~~----------~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~ 266 (483)
+. ..+.++.+++.+++|+++|+++|++|++.++++.++.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~ 228 (488)
T 3eml_A 178 QVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEM 228 (488)
T ss_dssp CEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred cceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 21 123344466678999999999999999999987665443
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.98 E-value=1.2e-31 Score=277.83 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=200.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcccchhh
Q psy929 64 PYSPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILV-MPMALLYEVSGKWNFGFMM 142 (483)
Q Consensus 64 ~~~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~-~p~~i~~~~~~~~~~~~~~ 142 (483)
........++.+++.+++++|++||+++++++.+++++|+++|++++|||++|++.+++. +|..+.....+.|.++...
T Consensus 28 ~~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (448)
T 2z73_A 28 QVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAA 107 (448)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHH
Confidence 345556777889999999999999999999999999999999999999999999998774 8888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccc
Q psy929 143 CNLWVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFC 222 (483)
Q Consensus 143 C~~~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C 222 (483)
|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|++++++++++++.+.. ...+.....|
T Consensus 108 C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~-~~~~~~~~~c 186 (448)
T 2z73_A 108 CKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGA-YTLEGVLCNC 186 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSC-EEECTTSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceee-eeecCCceeE
Confidence 999999999999999999999999999999999999999999999999999999999999998776542 2223333455
Q ss_pred ccccc------chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCccc
Q psy929 223 SVCQN------YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTH 296 (483)
Q Consensus 223 ~~~~~------~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (483)
...+. ..+....+++.+++|+++++++|++|++.++|+.++.++..++... ..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~--------------------~~- 245 (448)
T 2z73_A 187 SFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNA--------------------KE- 245 (448)
T ss_dssp EECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCC--------------------TT-
T ss_pred ecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--------------------HH-
Confidence 43321 2344455666789999999999999999999876655443222100 00
Q ss_pred cccccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhh
Q psy929 297 RTSTTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 297 ~~~~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~ 356 (483)
....+...++++|++|++.+++++|++||+|+.+..++
T Consensus 246 ----------------------~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~ 283 (448)
T 2z73_A 246 ----------------------LRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALL 283 (448)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------HHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 00112345568889999999999999999998777665
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.98 E-value=1.6e-32 Score=286.04 Aligned_cols=190 Identities=38% Similarity=0.690 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccchhhHHHHH
Q psy929 69 QALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVS-GKWNFGFMMCNLWV 147 (483)
Q Consensus 69 ~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~-~~~~~~~~~C~~~~ 147 (483)
...++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+..... +.|.++...|++..
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 116 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFV 116 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHH
Confidence 34567788899999999999999999999999999999999999999999999999988877666 57999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCccc---ceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccccc
Q psy929 148 SFDVLSCTASILNLCMISVDRYYAITKPLEY---GVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSV 224 (483)
Q Consensus 148 ~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y---~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~ 224 (483)
++..++..+|++++++||+|||++|++|++| ....+.+++..+++++|++++++++|+++.+.. ......|..
T Consensus 117 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~----~~~~~~C~~ 192 (481)
T 3pbl_A 117 TLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT----TGDPTVCSI 192 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCC----CSSTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecc----cCCCCcccc
Confidence 9999999999999999999999999999999 567888999999999999999999998775442 233345654
Q ss_pred cccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHH
Q psy929 225 CQNYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAE 263 (483)
Q Consensus 225 ~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~ 263 (483)
.+ ..|..+..++.+++|+++++++|++|++.++++.++
T Consensus 193 ~~-~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 230 (481)
T 3pbl_A 193 SN-PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRK 230 (481)
T ss_dssp CC-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 33 346666677789999999999999999999986543
No 15
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.98 E-value=5.1e-32 Score=279.45 Aligned_cols=198 Identities=29% Similarity=0.451 Sum_probs=162.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHH
Q psy929 66 SPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNL 145 (483)
Q Consensus 66 ~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 145 (483)
+.....+..+++++++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+... ..|..+...|++
T Consensus 27 ~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~ 104 (447)
T 4eiy_A 27 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLF 104 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHH
Confidence 445666788899999999999999999999999999999999999999999999989999877643 367788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccC---CCcccc
Q psy929 146 WVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYRED---NGVSFC 222 (483)
Q Consensus 146 ~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~---~~~~~C 222 (483)
..++..++..+|++++++||+|||++|++|++|+.+++.+++..+++++|++++++++|+++.+....... .....|
T Consensus 105 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c 184 (447)
T 4eiy_A 105 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGC 184 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999877654211110 011123
Q ss_pred cccc-------c---chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy929 223 SVCQ-------N---YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEK 265 (483)
Q Consensus 223 ~~~~-------~---~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~ 265 (483)
.... . ..+....+++.+++|+++++++|++|++.++++.++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~ 237 (447)
T 4eiy_A 185 GEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLE 237 (447)
T ss_dssp CTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 2211 1 12223335566899999999999999999998765543
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.98 E-value=1.3e-31 Score=276.55 Aligned_cols=232 Identities=22% Similarity=0.290 Sum_probs=188.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHH
Q psy929 66 SPLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNL 145 (483)
Q Consensus 66 ~~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 145 (483)
+.....++.+++++++++|++||+++++++.+++++|+++|+|++|||++|+++ ++.+|..+.....+.|.++...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 455677788899999999999999999999999999999999999999999998 6788888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCccccccc
Q psy929 146 WVSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSVC 225 (483)
Q Consensus 146 ~~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~~ 225 (483)
..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|.++.... ........|...
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~--~~~~~~~~c~~~ 277 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA--QVEDEEIECLVE 277 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEE--CCCSSCCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeee--EeecCceeEEEe
Confidence 999999999999999999999999999999999999999999999999999999999988765432 222233345433
Q ss_pred cc-------chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCccccc
Q psy929 226 QN-------YGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTHRT 298 (483)
Q Consensus 226 ~~-------~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (483)
.. ..+.+..+++.+++|+++++++|.+|++.++++.+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~---------------------------------- 323 (434)
T 4ea3_A 278 IPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS---------------------------------- 323 (434)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS----------------------------------
T ss_pred cCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc----------------------------------
Confidence 21 2344555667789999999999999999887642100
Q ss_pred cccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhh
Q psy929 299 STTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 299 ~~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~ 356 (483)
..+...++++|+++++.+++++|++||+|+.+..+.
T Consensus 324 ----------------------~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~ 359 (434)
T 4ea3_A 324 ----------------------GSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLA 359 (434)
T ss_dssp ----------------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------cchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012345668899999999999999999999998776
No 17
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.98 E-value=1.6e-31 Score=261.21 Aligned_cols=224 Identities=22% Similarity=0.304 Sum_probs=179.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHH
Q psy929 67 PLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLW 146 (483)
Q Consensus 67 ~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~ 146 (483)
.....++.++|.+++++|++||+++++++.++|++|+++|+|++|||++|+++++ .+|..+.... .+|..|+..|+..
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHH
Confidence 3456778899999999999999999999999999999999999999999999964 5666655544 4699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCccccccc-
Q psy929 147 VSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFCSVC- 225 (483)
Q Consensus 147 ~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C~~~- 225 (483)
.++..++..+|++++++||+|||+||++|++|+...+ +++..+++++|+++++.++|+......... +.....|...
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~-~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~-~~~~~~~~~~~ 163 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKR-HLVKFVCLGCWGLSMNLSLPFFLFRQAYHP-NNSSPVCYEVL 163 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHTSSCCCC-CTTSCCCCSCC
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhh-hhhHheehHHHHHHHHHhcchhhcceeecC-CCCCceeeeec
Confidence 9999999999999999999999999999999876544 567778889999999999998776543222 2221112111
Q ss_pred ------ccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCcccccc
Q psy929 226 ------QNYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTHRTS 299 (483)
Q Consensus 226 ------~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (483)
....+....+.+.+++|+.++.++|.++.+.++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~--------------------------------------- 204 (296)
T 2lnl_A 164 GNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA--------------------------------------- 204 (296)
T ss_dssp SCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC---------------------------------------
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------
Confidence 11234455566778999999999999887655432
Q ss_pred ccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 300 TTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 300 ~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
..++++|++|++.+++++|++||+|+.+..+...
T Consensus 205 -------------------------~~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~ 238 (296)
T 2lnl_A 205 -------------------------HMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADT 238 (296)
T ss_dssp -------------------------CCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------hhhhhhhHHHHHHHhhhheeeeehHHHHHHHHHH
Confidence 1124668999999999999999999999887743
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=7.4e-32 Score=284.53 Aligned_cols=260 Identities=28% Similarity=0.522 Sum_probs=198.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhHHHH
Q psy929 67 PLQALIIGLILLIIIIVTIVGNILVCIAVCIVRKLRRPCNYLLVSLAVSDLCVAILVMPMALLYEVSGKWNFGFMMCNLW 146 (483)
Q Consensus 67 ~~~~~~l~~~~~li~v~gl~gN~lvi~vi~~~~~lrt~~~ill~nLavaDll~~~~~~p~~i~~~~~~~~~~~~~~C~~~ 146 (483)
+....++++++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.....+.|.++...|++.
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 258 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFW 258 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhH
Confidence 34566788999999999999999999999999999999999999999999999989999999888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccceeeccchhhhhhHHHHHHHHHHHHhhHhhhccccccCCCcccc----
Q psy929 147 VSFDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPKRMILCVVFVWLGAACISLPPLIVLGNDYREDNGVSFC---- 222 (483)
Q Consensus 147 ~~l~~~~~~~S~~~l~~IsidRy~aI~~P~~y~~~~t~~~~~~~i~~iWl~s~l~~~p~~~~~~~~~~~~~~~~~C---- 222 (483)
.++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++++++....... ......|
T Consensus 259 ~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~-~~~~~~c~~~~ 337 (514)
T 3sn6_R 259 TSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRAT-HQEAINCYAEE 337 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC----CHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecc-cCcccceeecc
Confidence 99999999999999999999999999999999998999999999999999999999777654332111 1111122
Q ss_pred ---cccccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHhhhcceeeeeeeccccCCCCCCCCCCCCcccccc
Q psy929 223 ---SVCQNYGYQIYATLGSFYIPLTVMITVYYKIFCAARKIVAEEKRAQSHIIMEHCYLQIHNNSSPATNSNRGHTHRTS 299 (483)
Q Consensus 223 ---~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (483)
.......|.+..+++.+++|+++++++|.+|++.++++.++.+......... +.+........+...
T Consensus 338 ~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--- 407 (514)
T 3sn6_R 338 TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQ-------NLSQVEQDGRTGHGL--- 407 (514)
T ss_dssp SCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------------------------
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc-------ccccccccccccccc---
Confidence 1122345666777788999999999999999999998766554433221110 000000000000000
Q ss_pred ccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhh
Q psy929 300 TTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEV 357 (483)
Q Consensus 300 ~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~ 357 (483)
...++..++++|+++++.+++++|++||+|+.+..++.
T Consensus 408 --------------------~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~ 445 (514)
T 3sn6_R 408 --------------------RRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVH 445 (514)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122445688999999999999999999999988773
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.30 E-value=9.5e-08 Score=59.60 Aligned_cols=30 Identities=57% Similarity=1.120 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHheeeCCcccceeeccc
Q psy929 156 ASILNLCMISVDRYYAITKPLEYGVKRTPK 185 (483)
Q Consensus 156 ~S~~~l~~IsidRy~aI~~P~~y~~~~t~~ 185 (483)
+|++++++|++|||+||++|++|...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 689999999999999999999998777665
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.46 E-value=2.7e-05 Score=48.58 Aligned_cols=28 Identities=11% Similarity=-0.014 Sum_probs=25.2
Q ss_pred hhhhhhhhhhhhhhhhccccchhhhhhh
Q psy929 329 KNKANKYQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 329 ~~k~~k~l~iiv~vflicwlP~~i~~l~ 356 (483)
|+|++|++.+++++|++||+||.+..+.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~ 28 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAH 28 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHH
Confidence 4689999999999999999999988765
No 21
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.07 E-value=0.00031 Score=50.50 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy929 72 IIGLILLIIIIVTIVGNILVCIAVCIVRKL 101 (483)
Q Consensus 72 ~l~~~~~li~v~gl~gN~lvi~vi~~~~~l 101 (483)
+++++|.+++++|++||+++++++.++|..
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 678899999999999999999999987754
No 22
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=92.61 E-value=1.2 Score=44.55 Aligned_cols=35 Identities=11% Similarity=-0.151 Sum_probs=29.8
Q ss_pred HHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhh
Q psy929 325 QCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVND 359 (483)
Q Consensus 325 ~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~ 359 (483)
..++|+|++|++.+++++|++||+|+++..++...
T Consensus 379 ~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~ 413 (467)
T 3uon_A 379 PPSREKKVTRTILAILLAFIITWAPYNVMVLINTF 413 (467)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44568899999999999999999999998887433
No 23
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=88.23 E-value=0.71 Score=46.51 Aligned_cols=36 Identities=17% Similarity=-0.025 Sum_probs=31.7
Q ss_pred hHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 323 RVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 323 ~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
+...++++|++|++.+++++|++||+|++++.++..
T Consensus 384 ~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~ 419 (488)
T 3eml_A 384 RSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTF 419 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Confidence 456778999999999999999999999999987743
No 24
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=86.08 E-value=0.16 Score=50.95 Aligned_cols=69 Identities=6% Similarity=-0.019 Sum_probs=39.9
Q ss_pred cccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhhhHHHHHHhh
Q psy929 299 STTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRAR 368 (483)
Q Consensus 299 ~~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~ 368 (483)
......+.+||+|+.+..+.......... +.............++.+.+.+++|.+.++.||+.++..+
T Consensus 340 ~~vv~~F~i~w~P~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~ 408 (434)
T 4ea3_A 340 LVVVAVFVGCWTPVQVFVLAQGLGVQPSS-ETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFC 408 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34466788899998877664422111000 1111111223335667888999999999899988876653
No 25
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=84.44 E-value=1.6 Score=44.56 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=30.0
Q ss_pred HHhhhhhhhhhhhhhhhhhccccchhhhhhhhhh
Q psy929 326 CKRKNKANKYQEIQESLDLDCTSEYFTRTLEVND 359 (483)
Q Consensus 326 ~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~ 359 (483)
.++|+|++|++++++++|++||+||++..++...
T Consensus 400 ~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~ 433 (500)
T 2rh1_A 400 CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI 433 (500)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999888443
No 26
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=78.57 E-value=0.66 Score=46.75 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=28.0
Q ss_pred hhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 328 RKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 328 ~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
+++|++|++.+++++|++||+|+++..++..
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~ 425 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNT 425 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 5899999999999999999999999887743
No 27
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=72.85 E-value=13 Score=36.65 Aligned_cols=68 Identities=7% Similarity=-0.026 Sum_probs=45.0
Q ss_pred ccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhhhHHHHHHhhhh
Q psy929 300 TTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRARRK 370 (483)
Q Consensus 300 ~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~~~ 370 (483)
.+...+.+||+|+.+..+........ .... ..........++.+.+.++++.+.++.||+.+++.++.
T Consensus 265 ~iv~~F~i~~~P~~i~~~~~~~~~~~--~~~~-~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 265 VIVSQFLLSWSPYAVVALLAQFGPLE--WVTP-YAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGG--GCCH-HHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCcc--cCCh-HHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 34678889999998877654332110 0111 11223344566788899999999999999999887653
No 28
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=70.76 E-value=0.35 Score=49.69 Aligned_cols=63 Identities=10% Similarity=-0.014 Sum_probs=40.0
Q ss_pred cccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhhhHHHHHHhh
Q psy929 301 TSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRAR 368 (483)
Q Consensus 301 ~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~ 368 (483)
....+.+||+|+.+..+....... ............+.++.+.+.+++|. .++.||+.++..+
T Consensus 427 iv~~F~lcwlP~~i~~~~~~~~~~----~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l 489 (514)
T 3sn6_R 427 IMGTFTLCWLPFFIVNIVHVIQDN----LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELL 489 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc----ccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHh
Confidence 356789999999987765433211 10111223334456778888888887 6788888777664
No 29
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=68.19 E-value=0.099 Score=53.99 Aligned_cols=34 Identities=12% Similarity=-0.009 Sum_probs=29.8
Q ss_pred HHHHhhhhhhhhhhhhhhhhhccccchhhhhhhh
Q psy929 324 VQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEV 357 (483)
Q Consensus 324 ~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~ 357 (483)
...++|+|++||+++|+++|++||+||++..++.
T Consensus 399 ~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~ 432 (510)
T 4grv_A 399 GSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMF 432 (510)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556789999999999999999999999888764
No 30
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=67.18 E-value=0.17 Score=52.21 Aligned_cols=32 Identities=19% Similarity=0.036 Sum_probs=26.9
Q ss_pred HHhhhhhhhhhhhhhhhhhccccchhhhhhhh
Q psy929 326 CKRKNKANKYQEIQESLDLDCTSEYFTRTLEV 357 (483)
Q Consensus 326 ~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~ 357 (483)
.++++|++|++.+++++|++||+||++..++.
T Consensus 413 ~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~ 444 (520)
T 3v2y_A 413 SSENVALLKTVIIVLSVFIACWAPLFILLLLD 444 (520)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999998887773
No 31
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=65.80 E-value=2.8 Score=41.69 Aligned_cols=34 Identities=3% Similarity=0.022 Sum_probs=29.7
Q ss_pred HHHhhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 325 QCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 325 ~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
..++|+|++|++++++++|++||+|++++.++..
T Consensus 374 ~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~ 407 (464)
T 4dkl_A 374 KDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKA 407 (464)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4467889999999999999999999999888743
No 32
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=62.28 E-value=3.1 Score=41.23 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=28.7
Q ss_pred Hhhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 327 KRKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 327 ~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
++|+|++|++.+++++|++||+|++++.++..
T Consensus 366 ~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~ 397 (452)
T 3rze_A 366 NRERKAAKQLGFIMAAFILCWIPYFIFFMVIA 397 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 47899999999999999999999999887743
No 33
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=58.17 E-value=1.1 Score=44.58 Aligned_cols=36 Identities=17% Similarity=-0.025 Sum_probs=31.5
Q ss_pred hHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 323 RVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 323 ~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
+...++++|++|++.+++++|++||+|+++..++..
T Consensus 343 ~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~ 378 (447)
T 4eiy_A 343 RSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTF 378 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHH
Confidence 456778999999999999999999999999877643
No 34
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=54.53 E-value=1.6 Score=40.75 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=47.2
Q ss_pred cccccCCCCccCCCCccccccchhh-----HHHHhhhhhhh-hhhhhhhhhhccccchhhhhhhhhhhHHHHHHhhh
Q psy929 299 STTSTNTTGRWKPGGCRKWLRTQDR-----VQCKRKNKANK-YQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRARR 369 (483)
Q Consensus 299 ~~~~~~~~~~w~P~~~~~~~~~~~~-----~~~~~~~k~~k-~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~~ 369 (483)
......+..||+|++.......... ........... ........++.+.+++++|.+.++.||+.+++.++
T Consensus 217 ~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 293 (296)
T 2lnl_A 217 FAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILA 293 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHH
T ss_pred HHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhc
Confidence 3456788999999998776543221 11222222222 22344566788999999999999999999888764
No 35
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=45.63 E-value=0.84 Score=46.01 Aligned_cols=35 Identities=9% Similarity=-0.037 Sum_probs=30.6
Q ss_pred HHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhh
Q psy929 324 VQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVN 358 (483)
Q Consensus 324 ~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~ 358 (483)
...++++|++|++++++++|++||+||++..++..
T Consensus 380 ~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~ 414 (484)
T 3vw7_A 380 ANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHY 414 (484)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 35567889999999999999999999999888753
No 36
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=38.98 E-value=0.58 Score=47.48 Aligned_cols=22 Identities=14% Similarity=0.019 Sum_probs=14.4
Q ss_pred hhhhhhhhhhccccchhhhhhh
Q psy929 335 YQEIQESLDLDCTSEYFTRTLE 356 (483)
Q Consensus 335 ~l~iiv~vflicwlP~~i~~l~ 356 (483)
++++++++|++||+|++++.++
T Consensus 414 ~l~~vv~~F~icw~P~~i~~~~ 435 (502)
T 3odu_A 414 TTVILILAFFACWLPYYIGISI 435 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHH
Confidence 3666666777777777665555
No 37
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=33.25 E-value=2 Score=41.26 Aligned_cols=71 Identities=15% Similarity=-0.023 Sum_probs=44.0
Q ss_pred cccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhhhHHHHHHhhh
Q psy929 299 STTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRARR 369 (483)
Q Consensus 299 ~~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~~ 369 (483)
......+..||+|+.+..............+.............++.+.+.+++|.+.++.||+.++..++
T Consensus 251 ~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 321 (364)
T 2ks9_A 251 IVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFR 321 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 34567888999999887664432211100000011112333455678888999999999999999888753
No 38
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=32.10 E-value=59 Score=19.99 Aligned_cols=20 Identities=25% Similarity=0.519 Sum_probs=10.3
Q ss_pred hHHHHHH-HHHHHHHHHHHHh
Q psy929 240 YIPLTVM-ITVYYKIFCAARK 259 (483)
Q Consensus 240 ~lPl~ii-~~~y~~I~~~lr~ 259 (483)
++|++++ ++.|..+.+-=+|
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~K 26 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQK 26 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHH
Confidence 4455444 5566666554333
No 39
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=29.73 E-value=3.7 Score=38.13 Aligned_cols=64 Identities=13% Similarity=-0.052 Sum_probs=40.9
Q ss_pred ccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhhhHHHHHHhh
Q psy929 300 TTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRAR 368 (483)
Q Consensus 300 ~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~ 368 (483)
.....+..||+|+++........... .............++.+.+++++|. .++.||+.+++.+
T Consensus 236 ~~~~~f~i~~~P~~i~~~~~~~~~~~----~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l 299 (315)
T 4amj_A 236 IIMGVFTLCWLPFFLVNIVNVFNRDL----VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL 299 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTS----SCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc----chHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHh
Confidence 34667889999999877654332111 0011122333456678888888888 7888988887765
No 40
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=21.47 E-value=7.5 Score=36.71 Aligned_cols=66 Identities=5% Similarity=-0.152 Sum_probs=42.5
Q ss_pred ccccCCCCccCCCCccccccchhhHHHHhhhhhhhhhhhhhhhhhccccchhhhhhhhhhhHHHHHHhh
Q psy929 300 TTSTNTTGRWKPGGCRKWLRTQDRVQCKRKNKANKYQEIQESLDLDCTSEYFTRTLEVNDFQLNLKRAR 368 (483)
Q Consensus 300 ~~~~~~~~~w~P~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~vflicwlP~~i~~l~~~~f~~~~~~~~ 368 (483)
.....+..||+|+............ .+.............++.+.+.++++.+.++.||+.+++.+
T Consensus 257 ~i~~~f~i~~~P~~i~~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~ 322 (349)
T 1u19_A 257 IMVIAFLICWLPYAGVAFYIFTHQG---SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTL 322 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT---SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHhheecCC---cccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHh
Confidence 4466788999999876554322111 01111112233445667888999999999999999888765
Done!