Query psy9298
Match_columns 167
No_of_seqs 104 out of 128
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 23:51:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ayq_A Lysozyme; inhibitor, hy 100.0 9.5E-49 3.2E-53 303.1 0.0 108 21-158 2-115 (122)
2 2dqa_A Lysozyme; enzyme, subst 100.0 2.7E-48 9.3E-53 301.1 -0.6 109 20-158 2-117 (124)
3 1lsg_A Hen egg white lysozyme; 66.8 0.61 2.1E-05 36.4 -1.6 104 23-141 22-138 (144)
4 2gv0_A Lysozyme C; hydrolase; 52.1 3.3 0.00011 31.5 0.2 72 23-98 22-101 (131)
5 2nwd_X Lysozyme C; native chem 51.0 3.5 0.00012 31.4 0.2 72 23-98 21-100 (130)
6 1qqy_A Lysozyme C; APO-type pr 50.1 5.7 0.00019 30.2 1.3 73 23-98 22-100 (130)
7 1jug_A Lysozyme; calcium-bindi 46.3 5.5 0.00019 30.0 0.7 72 23-98 21-99 (125)
8 3b72_A Lysozyme C; hen egg-whi 41.7 11 0.00038 29.0 1.8 72 23-98 39-117 (147)
9 2vb1_A Lysozyme C; antimicrobi 39.6 8.3 0.00028 29.2 0.7 72 23-98 21-99 (129)
10 2z2f_A Lysozyme C-2; stomach l 32.7 9.8 0.00034 28.9 0.1 69 25-98 23-100 (129)
11 2lur_A Kalata; beta hairpin, p 22.8 14 0.00048 21.6 -0.5 17 39-55 9-26 (29)
No 1
>3ayq_A Lysozyme; inhibitor, hydrolase-hydrolase inhibitor CO; HET: NAG 4NN; 1.77A {Meretrix lusoria} PDB: 3ab6_A*
Probab=100.00 E-value=9.5e-49 Score=303.07 Aligned_cols=108 Identities=32% Similarity=0.660 Sum_probs=101.9
Q ss_pred cCCCccHhHHHhHhhhhcCCCCCCCCCC----CcccceeeCHHHHhhcCCCCcccccccccccCCCccccccCchhhHHH
Q psy9298 21 STQPVDQICLGCICHGMSLCNQTIGCNG----DTCGAFKITWAYWSDAGKPTIHFHIINFLSRVLGPYRYCIPNFIALGQ 96 (167)
Q Consensus 21 ~~~~vs~~CL~CIC~a~SgCn~~~~C~~----~~CG~F~It~~YW~DAGkp~~~~~~~~d~~~~~~a~~~Ca~d~~CA~~ 96 (167)
++++|+++||+|||+|+|||+ +++|++ .+||||||||+||+|||||+ ++|++||+|++||++
T Consensus 2 ~~~~vs~~CL~CiC~a~SgC~-~~~C~~d~~s~~CG~f~Is~~YW~Dag~p~-------------~a~~~Ca~d~~CA~~ 67 (122)
T 3ayq_A 2 AGGTVSQRCLSCICKMESGCR-NVGCKMDMGSLSCGYFQIKEAYWIDCGRPG-------------SSWKSCAASSYCASL 67 (122)
Confidence 468999999999999999997 589987 57999999999999999997 599999999999999
Q ss_pred hhhhhccCCcCCCCCCCCCCcccC--CCCCCCCChHHHHHHhcCCCCCCCCCCchHHHHHHHHH
Q psy9298 97 TVLEIFCIPPFQNFPFKPVVHTYD--CDADGQIDCRDYAAIHRLGGYGCNAPLDATYLARFNKC 158 (167)
Q Consensus 97 tV~~~~~~~~~q~Ym~r~~~y~~D--Cn~DG~~dCeDyarIH~~Gp~GC~~~~t~~Y~~r~~~C 158 (167)
|| |+||+| |++| || +|||||||||++||+||++++|..||++||++
T Consensus 68 tV---------~~Ym~r---Y~~~~~Cn----~dCed~ariH~gGp~gC~~~~t~~Yw~~v~~~ 115 (122)
T 3ayq_A 68 CV---------QNYMKR---YAKWAGCP----LRCEGFAREHNGGPRGCKKGSTIGYWNRLQKI 115 (122)
Confidence 99 999999 8886 86 89999999999999999999999999999995
No 2
>2dqa_A Lysozyme; enzyme, substrate complex, hydrolase; HET: NAG BGC; 1.60A {Tapes japonica}
Probab=100.00 E-value=2.7e-48 Score=301.09 Aligned_cols=109 Identities=30% Similarity=0.634 Sum_probs=102.4
Q ss_pred ccCCCccHhHHHhHhhhhcC-CCCCCCCCC----CcccceeeCHHHHhhcCCCCcccccccccccCCCccccccCchhhH
Q psy9298 20 QSTQPVDQICLGCICHGMSL-CNQTIGCNG----DTCGAFKITWAYWSDAGKPTIHFHIINFLSRVLGPYRYCIPNFIAL 94 (167)
Q Consensus 20 ~~~~~vs~~CL~CIC~a~Sg-Cn~~~~C~~----~~CG~F~It~~YW~DAGkp~~~~~~~~d~~~~~~a~~~Ca~d~~CA 94 (167)
.++++|+++||+|||+++|| |++ ++|.+ .+||||||||+||+|||||+ ++|++||+|++||
T Consensus 2 ~~~~~vs~~CL~CiC~~~Sg~C~~-~~C~~d~~~~~CG~f~Is~~YW~Dag~p~-------------~a~~~Ca~d~~Ca 67 (124)
T 2dqa_A 2 FAPGMVSQKCLLCMCKLESGGCKP-IGCRMDVGSLSCGYFQIKQPYWIDCGKPG-------------KDWKSCSNDINCS 67 (124)
T ss_dssp CCCSSSCHHHHHHHHHHHHTSSCC-CCEEEETTEEEETTTTEEHHHHHHTTCCS-------------SSHHHHHTSHHHH
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCC-CcCCCCCCCcccceeEechHHHHHCCCCc-------------ccHHHhcccHHHH
Confidence 46799999999999999999 975 88987 58999999999999999997 4899999999999
Q ss_pred HHhhhhhccCCcCCCCCCCCCCcccC--CCCCCCCChHHHHHHhcCCCCCCCCCCchHHHHHHHHH
Q psy9298 95 GQTVLEIFCIPPFQNFPFKPVVHTYD--CDADGQIDCRDYAAIHRLGGYGCNAPLDATYLARFNKC 158 (167)
Q Consensus 95 ~~tV~~~~~~~~~q~Ym~r~~~y~~D--Cn~DG~~dCeDyarIH~~Gp~GC~~~~t~~Y~~r~~~C 158 (167)
++|| |+||+| |++| || +|||||||||++||+||++++|..||++|++|
T Consensus 68 ~~tV---------~~Ym~r---y~~~~~C~----~dCed~ariH~gGp~gC~~~~t~~Yw~~v~~~ 117 (124)
T 2dqa_A 68 SKCV---------QQYMKR---YATHYRCP----LNCEGFAREHNGGPNGCHSSRTLKYWELLQKI 117 (124)
T ss_dssp HHHH---------HHHHHH---HHHHTTCC----SSHHHHHHHHHHCTTGGGCGGGHHHHHHHTTS
T ss_pred HHHH---------HHHHHH---hCCccCCC----CcHHHHHHHHccCcccCCCCcchHHHHHHhhc
Confidence 9999 999999 8875 86 79999999999999999999999999999996
No 3
>1lsg_A Hen egg white lysozyme; fibrinogen, hybrid protein; 2.40A {Gallus gallus} SCOP: d.2.1.2
Probab=66.82 E-value=0.61 Score=36.38 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=61.8
Q ss_pred CCccHhHHHhHhhhhcCCCCCCC-CC---CCcccceeeCHHHHhhcCC-CCc-cc-ccccccccCCCccccccCchhhHH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIG-CN---GDTCGAFKITWAYWSDAGK-PTI-HF-HIINFLSRVLGPYRYCIPNFIALG 95 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~-C~---~~~CG~F~It~~YW~DAGk-p~~-~~-~~~~d~~~~~~a~~~Ca~d~~CA~ 95 (167)
..++..=+.||-+.||+=|..+. =+ +.-=|.|||.-.+|=.-|+ |.+ .. +| .-+...+ .++.++-.||.
T Consensus 22 ~~~~l~~wvcIa~~ES~~nt~av~~n~~gs~dyGLfQINs~~wC~~g~~~~~~n~Cgi-~c~~Ll~---ddI~~~i~CAk 97 (144)
T 1lsg_A 22 RGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNI-PCSALLS---SDITASVNCAK 97 (144)
T ss_dssp TTBCTHHHHHHHHHHHSSBTTCEEECTTSCEEETTTTEETTTTCBCSCSTTCCCTTCC-BGGGSSS---SSTHHHHHHHH
T ss_pred CCcCHHHhhHHHHHhcCCCCcCeecCCCCCeeeeeeeecHHHhcccCCCccccccCCC-CHHHHcC---cchHHHHHHHH
Confidence 34555558999999998665432 11 2358999999999976665 432 11 01 0111111 15667889999
Q ss_pred HhhhhhccCCcCCC--CCCCCCCcccCCCCCC----CCChHHHHHHhcCCCC
Q psy9298 96 QTVLEIFCIPPFQN--FPFKPVVHTYDCDADG----QIDCRDYAAIHRLGGY 141 (167)
Q Consensus 96 ~tV~~~~~~~~~q~--Ym~r~~~y~~DCn~DG----~~dCeDyarIH~~Gp~ 141 (167)
+++ +. =|.--+.+...|.+.. +..|. .+.|.+|+.
T Consensus 98 ~I~---------~~~~G~~aW~~W~~~C~g~~l~~~i~~C~--~~~~~~~~~ 138 (144)
T 1lsg_A 98 KIV---------SDGNGMNAWVAWRNRCKGTDVQAWIRGCR--LQQHHLGGA 138 (144)
T ss_dssp HHT---------TSSSGGGGCHHHHHHTTTSCGGGGGTTTT--TTCCSSSCC
T ss_pred HHH---------cccccccchHHHhccCCCCCchHhhCccc--cccccCccc
Confidence 998 43 2222222445787643 23585 488888874
No 4
>2gv0_A Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}
Probab=52.09 E-value=3.3 Score=31.54 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=45.0
Q ss_pred CCccHhHHHhHhhhhcCCCCCCC-CC----CCcccceeeCHHHHhhcCC-CCcccccccccccCCCcc--ccccCchhhH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIG-CN----GDTCGAFKITWAYWSDAGK-PTIHFHIINFLSRVLGPY--RYCIPNFIAL 94 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~-C~----~~~CG~F~It~~YW~DAGk-p~~~~~~~~d~~~~~~a~--~~Ca~d~~CA 94 (167)
..++..=+.||-+.||+=|..+. =+ +.-=|+|||.-.||=+-|+ |.+.. .-.-.-++. ..+..+-.||
T Consensus 22 ~~~~l~~wvcIA~~ES~~nt~Av~~n~~~GS~dyGLfQINs~~wC~~~~~~~~~~----~c~i~c~~Ll~d~i~~~i~CA 97 (131)
T 2gv0_A 22 HGYSLGDWVCTAKHESNFNTAATNYNRGDQSTDYGILQINSRWWCNDGKTPKAKN----ACGIECSELLKADITAAVNCA 97 (131)
T ss_dssp GGCCHHHHHHHHHHHHTTBTTCEEEETTTTEEEETTTTEETTTTSBCSCCTTCCC----TTCCBGGGGGSSCCHHHHHHH
T ss_pred CccCHHHHHHHHHHHcCCCCcCeeccCCCCceeEeEEEeccccccCCCCCccccc----cCCCCHHHHcCCchhHHHHHH
Confidence 34566668899999998776542 11 2358999999999976666 53311 000011122 2455578899
Q ss_pred HHhh
Q psy9298 95 GQTV 98 (167)
Q Consensus 95 ~~tV 98 (167)
.+++
T Consensus 98 k~I~ 101 (131)
T 2gv0_A 98 KRIV 101 (131)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8888
No 5
>2nwd_X Lysozyme C; native chemical ligation, chemical protein synthesis, convergent synthesis, hydrolase; 1.04A {Synthetic} SCOP: d.2.1.2 PDB: 1iwu_A 1iwv_A 1iww_A 1iwx_A 1iwy_A 1iwz_A 1iy3_A 1iy4_A 1iwt_A 1jwr_A 1lz1_A 1lzr_A* 1lzs_A* 1op9_B 1re2_A* 1rem_A* 1rex_A 1rey_A* 1rez_A* 1jsf_A ...
Probab=51.00 E-value=3.5 Score=31.39 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=45.1
Q ss_pred CCccHhHHHhHhhhhcCCCCCCC-----CCCCcccceeeCHHHHhhcCC-CCcccccccccccCCCc-cc-cccCchhhH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIG-----CNGDTCGAFKITWAYWSDAGK-PTIHFHIINFLSRVLGP-YR-YCIPNFIAL 94 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~-----C~~~~CG~F~It~~YW~DAGk-p~~~~~~~~d~~~~~~a-~~-~Ca~d~~CA 94 (167)
+.++-.=+.||-+.||+=|..+. =.+.-=|+|||.-.||=+-|+ |.+.. .-.-.-.+ .. .+..+-.||
T Consensus 21 ~~~~l~~wvcIA~~ES~~nt~Avn~n~~~gS~dyGLfQINs~~wC~~~~~~~l~~----~cgi~c~~Ll~d~i~~~i~CA 96 (130)
T 2nwd_X 21 RGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVN----ACHLSCSALLQDNIADAVACA 96 (130)
T ss_dssp TTBCHHHHHHHHHHHHSSBTTCEEEETTTTEEEETTTTEETTTTSBCSCSTTCCC----TTCSBGGGGGSSSCHHHHHHH
T ss_pred CccCHHHHHHHHHHHcCCCCcCeeccCCCCCceeeeeeechhhhccCCCCccccc----ccCCChhhhcCCchhHHHHHH
Confidence 34555567899999998776542 112358999999999976666 54311 00001112 22 355688999
Q ss_pred HHhh
Q psy9298 95 GQTV 98 (167)
Q Consensus 95 ~~tV 98 (167)
.+++
T Consensus 97 k~I~ 100 (130)
T 2nwd_X 97 KRVV 100 (130)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9998
No 6
>1qqy_A Lysozyme C; APO-type protein, calcium binding lysozyme, enzyme, hydrolase; 1.85A {Canis lupus familiaris} SCOP: d.2.1.2 PDB: 1el1_A 1i56_A 2cwi_A 2z2e_A 2eql_A
Probab=50.06 E-value=5.7 Score=30.22 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=46.2
Q ss_pred CCccHhHHHhHhhhhcCCCCCCCC-----CCCcccceeeCHHHHhhcCC-CCcccccccccccCCCccccccCchhhHHH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIGC-----NGDTCGAFKITWAYWSDAGK-PTIHFHIINFLSRVLGPYRYCIPNFIALGQ 96 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~C-----~~~~CG~F~It~~YW~DAGk-p~~~~~~~~d~~~~~~a~~~Ca~d~~CA~~ 96 (167)
..++-.=+.||-+.||+=|..+.= .+.-=|.|||.-.||=+-|+ |.+...=+.-+.. -=..+.++-.||.+
T Consensus 22 ~~~~l~~wvcIA~~ES~~nt~Av~~~N~~gS~dyGLfQINs~~wC~~~~~~~~~~cgi~c~~L---l~d~i~~~v~CAk~ 98 (130)
T 1qqy_A 22 HGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKF---LDDNIDDDIACAKR 98 (130)
T ss_dssp TTBCHHHHHHHHHHHHTTBTTCEESSCSSSCCEETTTTEETTTTCBBTTBCCCCTTCSBGGGG---GSSCCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhCCCCcceecccCCCCceeeeeeechhhhcCCCCCcccccCCCCHHHh---ccCchHHHHHHHHH
Confidence 445666689999999987755421 13458999999999966666 4322210101111 11356678899999
Q ss_pred hh
Q psy9298 97 TV 98 (167)
Q Consensus 97 tV 98 (167)
++
T Consensus 99 I~ 100 (130)
T 1qqy_A 99 VV 100 (130)
T ss_dssp HT
T ss_pred HH
Confidence 98
No 7
>1jug_A Lysozyme; calcium-binding; 1.90A {Tachyglossus aculeatus} SCOP: d.2.1.2
Probab=46.30 E-value=5.5 Score=30.05 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=45.5
Q ss_pred CCccHhHHHhHhhhhcCCCCCCC-CC---CCcccceeeCHHHHhhcCC-CCcccccccccccCCCcc--ccccCchhhHH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIG-CN---GDTCGAFKITWAYWSDAGK-PTIHFHIINFLSRVLGPY--RYCIPNFIALG 95 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~-C~---~~~CG~F~It~~YW~DAGk-p~~~~~~~~d~~~~~~a~--~~Ca~d~~CA~ 95 (167)
..++..=+.||-+.||+=+..+. =+ +.-=|.|||.-.+|=+-|+ |.+.. .-.-.-.+. .++.++-.||.
T Consensus 21 ~~~~l~~wvcia~~ES~~~~~av~~n~~gs~d~GlfQINs~~~C~~~~~~~~~~----~c~i~c~~Ll~ddi~~~i~CAk 96 (125)
T 1jug_A 21 QHITLPNWVCTAFHESSYNTRATNHNTDGSTDYGILQINSRYWCHDGKTPGSKN----ACNISCSKLLDDDITDDLKCAK 96 (125)
T ss_dssp TTBCHHHHHHHHHHHHTTBTTCEEECTTSCEEETTTTEETTTTCBCSSCTTCCC----TTCSBGGGGSSSCCHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHcCCCCcCeecCCCCCeeeeeeeechhhhcccCCCccccc----cCCCCHHHHcCcchhHHHHHHH
Confidence 45666668999999998665432 11 2358999999999976666 43211 000001112 25667888998
Q ss_pred Hhh
Q psy9298 96 QTV 98 (167)
Q Consensus 96 ~tV 98 (167)
+++
T Consensus 97 ~I~ 99 (125)
T 1jug_A 97 KIA 99 (125)
T ss_dssp HHH
T ss_pred HHH
Confidence 888
No 8
>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A*
Probab=41.72 E-value=11 Score=29.00 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=47.6
Q ss_pred CCccHhHHHhHhhhhcCCCCCCC-CC---CCcccceeeCHHHHhhcCC-CCcccccccccccCCCcc--ccccCchhhHH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIG-CN---GDTCGAFKITWAYWSDAGK-PTIHFHIINFLSRVLGPY--RYCIPNFIALG 95 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~-C~---~~~CG~F~It~~YW~DAGk-p~~~~~~~~d~~~~~~a~--~~Ca~d~~CA~ 95 (167)
..++..=+.||-+.||+=|..+. =+ +.-=|.|||.-.+|-+.|+ |.+.. .-.-.-.+. .+|.++-.||.
T Consensus 39 ~~~~~~~~~cIa~~ES~~nt~av~~n~~gs~d~GlfQINs~~wC~~~~~~~~~~----~c~i~c~~Ll~ddi~~~i~CAk 114 (147)
T 3b72_A 39 RGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRN----LCNIPCSALLSSDITASVNCAK 114 (147)
T ss_dssp TTBCHHHHHHHHHHHHTTBTTCEEECTTSCEEETTTTEETTTTCBCSCCTTCCC----TTCSBGGGGGSSSCHHHHHHHH
T ss_pred CCCCHHHHhHHHHHhcCCCCcCeecCCCCCeeeeEEEeehhhhccccCCccccc----cCCCCHHHHcCCchHHHHHHHH
Confidence 55777788999999998665432 11 2358999999999987776 53211 000011122 26777899999
Q ss_pred Hhh
Q psy9298 96 QTV 98 (167)
Q Consensus 96 ~tV 98 (167)
+++
T Consensus 115 ~I~ 117 (147)
T 3b72_A 115 KIV 117 (147)
T ss_dssp HHH
T ss_pred HHH
Confidence 888
No 9
>2vb1_A Lysozyme C; antimicrobial, triclinic HEWL, atomic resolution, allergen, hydrolase, glycosidase, bacteriolytic enzyme; HET: EDO; 0.65A {Gallus gallus} SCOP: d.2.1.2 PDB: 194l_A 1aki_A 1azf_A 1b0d_A* 1b2k_A 1bgi_A 1bhz_A 1bvk_C 1bvx_A 1bwh_A 1bwi_A 1bwj_A 1c08_C 1c10_A 1dpw_A 1dpx_A 1dqj_C 1e8l_A 1f0w_A 1f10_A ...
Probab=39.55 E-value=8.3 Score=29.23 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=45.5
Q ss_pred CCccHhHHHhHhhhhcCCCCCCC-CC---CCcccceeeCHHHHhhcCC-CCcccccccccccCCCccc--cccCchhhHH
Q psy9298 23 QPVDQICLGCICHGMSLCNQTIG-CN---GDTCGAFKITWAYWSDAGK-PTIHFHIINFLSRVLGPYR--YCIPNFIALG 95 (167)
Q Consensus 23 ~~vs~~CL~CIC~a~SgCn~~~~-C~---~~~CG~F~It~~YW~DAGk-p~~~~~~~~d~~~~~~a~~--~Ca~d~~CA~ 95 (167)
..++..=+.||-+.||+=+..+. =+ +.-=|.|||.-.+|-+-|+ |.+.. .-.-.-.+.. ++.++-.||.
T Consensus 21 ~~~~l~~wv~ia~~ES~~~~~av~~n~~gs~d~GlfQINs~~~C~~~~~~~~~~----~c~i~c~~Ll~ddi~~~i~CAk 96 (129)
T 2vb1_A 21 RGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRN----LCNIPCSALLSSDITASVNCAK 96 (129)
T ss_dssp TTBCHHHHHHHHHHHHTTBTTCEEECTTSCEEETTTTEETTTTCBCSSCTTCCC----TTCSBGGGGGCSSCHHHHHHHH
T ss_pred CCcCHHHhhHHHHHhcCCCCcCeecCCCCCeeeeEeeechhhhcccCCCccccc----cCCCCHHHHcCcchHHHHHHHH
Confidence 45667778999999998665442 11 2358999999999977666 43211 0000111221 5666788998
Q ss_pred Hhh
Q psy9298 96 QTV 98 (167)
Q Consensus 96 ~tV 98 (167)
+++
T Consensus 97 ~I~ 99 (129)
T 2vb1_A 97 KIV 99 (129)
T ss_dssp HHH
T ss_pred HHH
Confidence 888
No 10
>2z2f_A Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylmuramidase C, bacteriolytic enzyme, hydrolase; 1.50A {Bos taurus}
Probab=32.66 E-value=9.8 Score=28.85 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=43.2
Q ss_pred ccHhHHHhHhhhhcCCCCCCC-----CCCCcccceeeCHHHHhhcCC-CCc-cc-ccccccccCCCccc-cccCchhhHH
Q psy9298 25 VDQICLGCICHGMSLCNQTIG-----CNGDTCGAFKITWAYWSDAGK-PTI-HF-HIINFLSRVLGPYR-YCIPNFIALG 95 (167)
Q Consensus 25 vs~~CL~CIC~a~SgCn~~~~-----C~~~~CG~F~It~~YW~DAGk-p~~-~~-~~~~d~~~~~~a~~-~Ca~d~~CA~ 95 (167)
++-.=+-||-+.||+=|..+. =.+.-=|+|||.-.||=+-|+ |.+ .. .| .-++=.. .+.++-.||.
T Consensus 23 ~~l~~wvciA~~ES~~nt~Av~~n~~~gS~dyGLfQINs~~wC~~~~~~~l~~~cgi-----~c~~Ll~d~i~~~i~CAk 97 (129)
T 2z2f_A 23 VSLANWLCLTKWESSYNTKATNYNPSSESTDYGIFQINSKWWCNDGKTPNAVDGCHV-----SCSELMENDIAKAVACAK 97 (129)
T ss_dssp BCHHHHHHHHHHHHTTBTTCEEEETTTTEEEETTTTEETTTSSBCSCSSSCCCTTSS-----BGGGGGSSSTHHHHHHHH
T ss_pred cCHHHHHHHHHHHcCCCCcCeeccCCCCCceeeeEeechhhhccCCCCcchhccCCC-----CcccccCcchhHHHHHHH
Confidence 444446799999998775542 112358999999999966666 543 11 11 0111122 3556788999
Q ss_pred Hhh
Q psy9298 96 QTV 98 (167)
Q Consensus 96 ~tV 98 (167)
+++
T Consensus 98 ~I~ 100 (129)
T 2z2f_A 98 HIV 100 (129)
T ss_dssp HHH
T ss_pred HHH
Confidence 988
No 11
>2lur_A Kalata; beta hairpin, plant protein; NMR {Synthetic}
Probab=22.80 E-value=14 Score=21.65 Aligned_cols=17 Identities=35% Similarity=0.847 Sum_probs=12.4
Q ss_pred CCCCCC-CCCCCccccee
Q psy9298 39 LCNQTI-GCNGDTCGAFK 55 (167)
Q Consensus 39 gCn~~~-~C~~~~CG~F~ 55 (167)
.||.|. .|+..+||-||
T Consensus 9 ~cntpgc~cswpvcghfr 26 (29)
T 2lur_A 9 TCNTPGCTCSWPVCGHFR 26 (29)
T ss_dssp CCCBTTBEEETTEEECSS
T ss_pred ccCCCCcEecCcccceee
Confidence 477652 45778999997
Done!