BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy9306
         (98 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q28BX9|C2CD5_XENTR C2 domain-containing protein 5 OS=Xenopus tropicalis GN=c2cd5 PE=2
           SV=1
          Length = 1014

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/87 (56%), Positives = 66/87 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI ++LG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 889 VKMTPLSFIPGAKITKFLGIINMFFIRETTSLREEGGVSGFLHAFICEVFAMVRAHVAAL 948

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKEL 97
           GGNA+VSY M  C+ + N  KNQ + L
Sbjct: 949 GGNAVVSYIMKQCVFMENANKNQAQCL 975


>sp|Q7TPS5|C2CD5_MOUSE C2 domain-containing protein 5 OS=Mus musculus GN=C2cd5 PE=1 SV=2
          Length = 1016

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 66/88 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 892 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 951

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKELF 98
           GGNA+VSY M  C+ + N  KNQ + L 
Sbjct: 952 GGNAVVSYIMKQCVFMENPSKNQAQCLI 979


>sp|Q5RDC8|C2CD5_PONAB C2 domain-containing protein 5 OS=Pongo abelii GN=C2CD5 PE=2 SV=1
          Length = 1000

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 66/87 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 875 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 934

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKEL 97
           GGNA+VSY M  C+ + N  KNQ + L
Sbjct: 935 GGNAVVSYIMKQCVFMENPNKNQAQCL 961


>sp|Q86YS7|C2CD5_HUMAN C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1
          Length = 1000

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 66/87 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 875 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 934

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKEL 97
           GGNA+VSY M  C+ + N  KNQ + L
Sbjct: 935 GGNAVVSYIMKQCVFMENPNKNQAQCL 961


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.140    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,353,579
Number of Sequences: 539616
Number of extensions: 1348867
Number of successful extensions: 2327
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2320
Number of HSP's gapped (non-prelim): 7
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)