BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9313
(356 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/338 (70%), Positives = 279/338 (82%), Gaps = 17/338 (5%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
QS E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSLGYGFVNY+R
Sbjct: 20 QSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
IITSRILCD + VR FV+G + +P +SKG+GF+RF+Q +EAE A+QELNGTIP+G+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDNLPGLSKGVGFIRFDQRVEAERAIQELNGTIPKGS 196
Query: 198 SEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLT 253
+EPITVKFAN+P+ KA LAA L QA R FG P+HH + RF+++PL
Sbjct: 197 TEPITVKFANNPSNNNKAIPPLAAYLTPQAT---------RRFGGPIHHPTGRFRYSPLA 247
Query: 254 ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD QT KCK
Sbjct: 248 GDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCK 307
Query: 314 GFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 308 GFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSFKTNK 345
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV E+A AI L
Sbjct: 269 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 328 NGYTLGNRVLQVSFKTNKSKA 348
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 280/361 (77%), Gaps = 40/361 (11%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK T QSLGYGFVNY+R+
Sbjct: 20 QASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRS 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
IITSRILCD + VR FV+G + +P +SKG+GF+RF+Q +EAE A+QELNGTIP+G+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIPKGS 196
Query: 198 SEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------ 247
SEPITVKFAN+P+ KA LAA L QA R FG P+HH + RF
Sbjct: 197 SEPITVKFANNPSNNNKAIPPLAAYLTPQAT---------RRFGGPIHHPTGRFRYIPLS 247
Query: 248 -----------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQ
Sbjct: 248 PLSSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQ 307
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+
Sbjct: 308 LFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTN 367
Query: 351 K 351
K
Sbjct: 368 K 368
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV ++A AI L
Sbjct: 292 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 350
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 351 NGYTLGNRVLQVSFKTNKSKA 371
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/351 (66%), Positives = 278/351 (79%), Gaps = 30/351 (8%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK T QSLGYGFVNY+R
Sbjct: 20 QASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
IITSRILCD + VR FV+G + +P +SKG+GF+RF+Q +EAE A+QELNGTIP+G+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIPKGS 196
Query: 198 SEPITVKFANSPAGRAKALA--ANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------- 247
SEPITVKFAN+P+ KA+ A L QA R +G P+HH + RF
Sbjct: 197 SEPITVKFANNPSNNNKAIPPLAYLTPQAT---------RRYGGPIHHPTGRFSTGKAML 247
Query: 248 -------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQN 300
+++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+
Sbjct: 248 AINKGLQRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQS 307
Query: 301 VKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 308 VKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 358
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV ++A AI L
Sbjct: 282 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 340
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 341 NGYTLGNRVLQVSFKTNKSKA 361
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia vitripennis]
Length = 383
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/372 (64%), Positives = 279/372 (75%), Gaps = 51/372 (13%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
QS E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSLGYGFVNY+R
Sbjct: 20 QSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSG----TPE-----------------IPQISKGIGFVRFN 177
IITSRILCD + VR FV+G PE I +SKG+GF+RF+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDNLPETRENSPATLGCVRLALDIAGLSKGVGFIRFD 196
Query: 178 QHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAM 234
Q +EAE A+QELNGTIP+G++EPITVKFAN+P+ KA LAA L QA
Sbjct: 197 QRVEAERAIQELNGTIPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQAT--------- 247
Query: 235 RHFGNPLHH-SARF--------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNL 279
R FG P+HH + RF +++PL DLL NSMLP +++GSGWCIFVYNL
Sbjct: 248 RRFGGPIHHPTGRFSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNL 307
Query: 280 APETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALG 339
APETE+NVLWQLFGPFGAVQ+VKV+RD QT KCKGFGFV MTNY+EAV AIQSLNGY LG
Sbjct: 308 APETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLG 367
Query: 340 DRLLQVSFKTHK 351
+R+LQVSFKT+K
Sbjct: 368 NRVLQVSFKTNK 379
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV E+A AI L
Sbjct: 303 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 361
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 362 NGYTLGNRVLQVSFKTNKSKA 382
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/360 (64%), Positives = 278/360 (77%), Gaps = 39/360 (10%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LF+S+GEVESCKLIRDK T QSLGYGFVNY+R
Sbjct: 20 QASQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
IITSRILCD + VR FV+G + +P +SKG+GF+RF+Q +EAE A+QELNGT+P+G+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVPKGS 196
Query: 198 SEPITVKFANSPAGRAKALA--ANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------- 247
SEPITVKFAN+P+ KA+ A L QA R +G P+HH + RF
Sbjct: 197 SEPITVKFANNPSNNNKAIPPLAYLAPQAT---------RRYGGPIHHPTGRFRYIPLSP 247
Query: 248 ----------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQL
Sbjct: 248 LSSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQL 307
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 308 FGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV ++A AI L
Sbjct: 291 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 349
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 350 NGYTLGNRVLQVSFKTNKSKA 370
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/360 (64%), Positives = 278/360 (77%), Gaps = 39/360 (10%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LF+S+GEVESCKLIRDK T QSLGYGFVNY+R
Sbjct: 20 QASQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
IITSRILCD + VR FV+G + +P +SKG+GF+RF+Q +EAE A+QELNGT+P+G+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVPKGS 196
Query: 198 SEPITVKFANSPAGRAKALA--ANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------- 247
SEPITVKFAN+P+ KA+ A L QA R +G P+HH + RF
Sbjct: 197 SEPITVKFANNPSNNNKAIPPLAYLAPQAT---------RRYGGPIHHPTGRFRYIPLSP 247
Query: 248 ----------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQL
Sbjct: 248 LSSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQL 307
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 308 FGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon pisum]
Length = 383
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/359 (66%), Positives = 275/359 (76%), Gaps = 30/359 (8%)
Query: 10 TTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
+T SH S S E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSLG
Sbjct: 19 STNSHASQGNSLNEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLG 78
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDL 129
YGFVNY+R EDAE+AI LNGL+LQNK+IKVS+ARPSSEAIK ANLYVSGLPKHMTQ+DL
Sbjct: 79 YGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSFARPSSEAIKGANLYVSGLPKHMTQQDL 138
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
ENLF PYG IITSRILCD M VR FV T S +GF+RF+Q IEAE A+QEL
Sbjct: 139 ENLFSPYGRIITSRILCDNMT---VRQFVGNTGG--DHSPCVGFIRFDQRIEAERAIQEL 193
Query: 190 NGTIPEGASEPITVKFANSPAGR--AKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SAR 246
NGT+P+G++E ITVKFAN+P+ ALAA L Q A R FAA P+HH + R
Sbjct: 194 NGTVPKGSTESITVKFANNPSSNKAVPALAAYLTPQGA--RRFAAG------PIHHPTGR 245
Query: 247 F--------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLF 292
F +++PL DLL NSMLP S++GSGWCIFVYNLAPETE+NVLWQLF
Sbjct: 246 FSTGKTMLAINKGLQRYSPLAGDLLANSMLPGNSMNGSGWCIFVYNLAPETEENVLWQLF 305
Query: 293 GPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 306 GPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 364
>gi|328792242|ref|XP_394166.4| PREDICTED: ELAV-like protein 2-like [Apis mellifera]
Length = 378
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/367 (63%), Positives = 279/367 (76%), Gaps = 46/367 (12%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK T QSLGYGFVNY+R
Sbjct: 20 QASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQ----------------ISKGIGFVRFNQHIE 181
IITSRILCD + VR FV+G + +P+ +SKG+GF+RF+Q +E
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDYLPEKMMMDPLNNLNRLPTGLSKGVGFIRFDQRVE 196
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA--ANLNAQAAAMRHFAAAMRHFGN 239
AE A+QELNGTIP+G+SEPITVKFAN+P+ KA+ A L QA R +G
Sbjct: 197 AERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPLAYLTPQAT---------RRYGG 247
Query: 240 PLHH-SARF--------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETE 284
P+HH + RF +++PL DLL NSMLP +++GSGWCIFVYNLAPETE
Sbjct: 248 PIHHPTGRFSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETE 307
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
+NVLWQLFGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQ
Sbjct: 308 ENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQ 367
Query: 345 VSFKTHK 351
VSFKT+K
Sbjct: 368 VSFKTNK 374
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV ++A AI L
Sbjct: 298 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 356
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 357 NGYTLGNRVLQVSFKTNKSKA 377
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon pisum]
Length = 392
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/369 (65%), Positives = 276/369 (74%), Gaps = 39/369 (10%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
++T SH S S E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSL
Sbjct: 18 SSTNSHASQGNSLNEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSL 77
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
GYGFVNY+R EDAE+AI LNGL+LQNK+IKVS+ARPSSEAIK ANLYVSGLPKHMTQ+D
Sbjct: 78 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSFARPSSEAIKGANLYVSGLPKHMTQQD 137
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
LENLF PYG IITSRILCD M VR FV T S +GF+RF+Q IEAE A+QE
Sbjct: 138 LENLFSPYGRIITSRILCDNMT---VRQFVGNTGG--DHSPCVGFIRFDQRIEAERAIQE 192
Query: 189 LNGTIPEGASEPITVKFANSPAGR--AKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SA 245
LNGT+P+G++E ITVKFAN+P+ ALAA L Q A R FAA P+HH +
Sbjct: 193 LNGTVPKGSTESITVKFANNPSSNKAVPALAAYLTPQGA--RRFAAG------PIHHPTG 244
Query: 246 RF-----------------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPE 282
RF +++PL DLL NSMLP S++GSGWCIFVYNLAPE
Sbjct: 245 RFRYIPLSPLSSTGKTMLAINKGLQRYSPLAGDLLANSMLPGNSMNGSGWCIFVYNLAPE 304
Query: 283 TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRL 342
TE+NVLWQLFGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+
Sbjct: 305 TEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRV 364
Query: 343 LQVSFKTHK 351
LQVSFKT+K
Sbjct: 365 LQVSFKTNK 373
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/343 (67%), Positives = 267/343 (77%), Gaps = 39/343 (11%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-----------AQSLGYGF 72
E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSLGYGF
Sbjct: 28 ESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTVPGVITSPLLTGQSLGYGF 87
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
VNY+R EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DLE+L
Sbjct: 88 VNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLESL 147
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F PYG IITSRILCD I +SKG+GF+RF+Q +EAE A+QELNGT
Sbjct: 148 FSPYGRIITSRILCDN---------------ITGLSKGVGFIRFDQRLEAERAIQELNGT 192
Query: 193 IPEGASEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFK 248
IP+G++EPITVKFAN+P+ KA LAA L QA R F P+HH + RF+
Sbjct: 193 IPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQAT---------RRFAGPIHHPTGRFR 243
Query: 249 FAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q
Sbjct: 244 YSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQ 303
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 304 TNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 346
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/346 (66%), Positives = 267/346 (77%), Gaps = 42/346 (12%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA--------------QSLG 69
E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSLG
Sbjct: 27 ESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGMKLPGVITSPLLTGQSLG 86
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDL 129
YGFVNY+R EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+MTQ+DL
Sbjct: 87 YGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDL 146
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
E+LF PYG IITSRILCD I +SKG+GF+RF+Q +EAE A+QEL
Sbjct: 147 ESLFSPYGRIITSRILCDN---------------ITGLSKGVGFIRFDQRLEAERAIQEL 191
Query: 190 NGTIPEGASEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SA 245
NGTIP+G++EPITVKFAN+P+ KA LAA L QA R F P+HH +
Sbjct: 192 NGTIPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQAT---------RRFAGPIHHPTG 242
Query: 246 RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
RF+++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+R
Sbjct: 243 RFRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIR 302
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 303 DLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 348
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/351 (64%), Positives = 269/351 (76%), Gaps = 42/351 (11%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK + QSLGYGFVNY+R
Sbjct: 19 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 78
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+M Q+DLENLF PYG
Sbjct: 79 EDAEKAISTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGR 138
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
IITSRILCD I +SKG+GF+RF+Q +EAE A+QELNGTIP+G+S
Sbjct: 139 IITSRILCD---------------NITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSS 183
Query: 199 EPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------- 247
EPITVKFAN+P+ KA LAA L QA R FG P+HH + RF
Sbjct: 184 EPITVKFANNPSNNNKAIPPLAAYLAPQAT---------RRFGGPIHHPTGRFSTGKAML 234
Query: 248 -------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQN 300
+++PL DLL NSMLP +++G+GWCIFVYNLAPETE+NVLWQLFGPFGAVQ+
Sbjct: 235 AINKGLQRYSPLAGDLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQLFGPFGAVQS 294
Query: 301 VKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VKV+RD QT KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 295 VKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSFKTNK 345
>gi|170028363|ref|XP_001842065.1| RNA-binding protein [Culex quinquefasciatus]
gi|167874220|gb|EDS37603.1| RNA-binding protein [Culex quinquefasciatus]
Length = 365
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/346 (65%), Positives = 270/346 (78%), Gaps = 20/346 (5%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
TQ Q D +NLIVNY+PQ MTQEE++ LFSS+GEVESCKLIRDK T QSLGY
Sbjct: 31 TQQQNGGSQED---SKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGY 87
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R EDA +AI LNGL+LQNK IKVS+ARPSSEAIK ANLYVSGLPK+M Q DLE
Sbjct: 88 GFVNYQRAEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYVSGLPKNMLQSDLE 147
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEI-PQISKGIGFVRFNQHIEAEHAMQEL 189
+LF PYG IITSRILCD + + R + S + E+ P +SKG+GF+RF+Q EAE A++EL
Sbjct: 148 SLFSPYGRIITSRILCDNITA---RQYASASGEVSPGLSKGVGFIRFDQRTEAEKAIKEL 204
Query: 190 NGTIPEGASEPITVKFANSPAGRAKA--LAANLNAQAAAMRHFAAAMRHFGNPLHH-SAR 246
NGTIP+G++EPITVKFAN+P+ LAA L QAA R F P+HH + R
Sbjct: 205 NGTIPKGSTEPITVKFANNPSNTKTVPPLAAYLGPQAA---------RRFAGPMHHPTGR 255
Query: 247 FKFAPLTADLLNNSMLPPKSL-HGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+++PL DLL NSM+P ++ +GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV++
Sbjct: 256 FRYSPLAGDLLANSMIPTNAIANGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIK 315
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 316 DLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 361
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/354 (64%), Positives = 271/354 (76%), Gaps = 40/354 (11%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK + QSLGYGFVNY+R
Sbjct: 20 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+M Q+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPE-IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
IITSRILCD + VR FV+G + +P +SKG+GF+RF+Q +EAE A+QELNGTIP+G+
Sbjct: 140 IITSRILCDNIT---VRQFVTGGGDNLPGLSKGVGFIRFDQRVEAERAIQELNGTIPKGS 196
Query: 198 SEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------ 247
SEPITVKFAN+P+ KA LAA L QA R FG P+HH + RF
Sbjct: 197 SEPITVKFANNPSNNNKAIPPLAAYLAPQAT---------RRFGGPIHHPTGRFRYIPLS 247
Query: 248 -----------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+++PL DLL NSMLP +++G+GWCIFVYNLAPETE+NVLWQ
Sbjct: 248 PLSSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQ 307
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
LFGPFGAVQ+VKV+RD QT KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 308 LFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQ 361
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D + LF G V++ K++RD + + G+GFV ++A AI +
Sbjct: 30 LIVNYLPQSMTQDEI-RSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINT 88
Query: 333 LNGYALGDRLLQVSF 347
LNG L ++ ++VS+
Sbjct: 89 LNGLRLQNKTIKVSY 103
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 269/360 (74%), Gaps = 51/360 (14%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK + QSLGYGFVNY+R
Sbjct: 20 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 79
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+M Q+DLENLF PYG
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGR 139
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
IITSRILCD I +SKG+GF+RF+Q +EAE A+QELNGTIP+G+S
Sbjct: 140 IITSRILCD---------------NITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSS 184
Query: 199 EPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------- 247
EPITVKFAN+P+ KA LAA L QA R FG P+HH + RF
Sbjct: 185 EPITVKFANNPSNNNKAIPPLAAYLAPQAT---------RRFGGPIHHPTGRFRYIPLSP 235
Query: 248 ----------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+++PL DLL NSMLP +++G+GWCIFVYNLAPETE+NVLWQL
Sbjct: 236 LSSTGKAMLAINKGLQRYSPLAGDLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQL 295
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VKV+RD QT KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 296 FGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSFKTNK 355
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V+S K+IRD T + G+GFV E+A AI L
Sbjct: 279 FVYNLAPET-EENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 337
Query: 89 NGLKLQNKSIKVSYARPSSEA 109
NG L N+ ++VS+ S+A
Sbjct: 338 NGYTLGNRVLQVSFKTNKSKA 358
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/330 (66%), Positives = 262/330 (79%), Gaps = 28/330 (8%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ E +NLIVNY+PQ+MTQ+E++ LFSS+GEVESCKLIRDK + QSLGYGFVNY+R
Sbjct: 19 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 78
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK+M Q+DLENLF PYG
Sbjct: 79 EDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGR 138
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
IITSRILCD + +SKG+GF+RF+Q +EAE A+QELNGTIP+G+S
Sbjct: 139 IITSRILCDNITG---------------LSKGVGFIRFDQRVEAERAIQELNGTIPKGSS 183
Query: 199 EPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTA 254
EPITVKFAN+P+ KA LAA L QA R FG P+HH + RF+++PL
Sbjct: 184 EPITVKFANNPSNNNKAIPPLAAYLAPQAT---------RRFGGPIHHPTGRFRYSPLAG 234
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
DLL NSMLP +++G+GWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD QT KCKG
Sbjct: 235 DLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKG 294
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
FGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 295 FGFVTMTNYEEAVVAIQSLNGYTLGNRVLQ 324
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D + LF G V++ K++RD + + G+GFV ++A AI +
Sbjct: 29 LIVNYLPQSMTQDEI-RSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINT 87
Query: 333 LNGYALGDRLLQVSF 347
LNG L ++ ++VS+
Sbjct: 88 LNGLRLQNKTIKVSY 102
>gi|242005325|ref|XP_002423520.1| protein elav, putative [Pediculus humanus corporis]
gi|212506634|gb|EEB10782.1| protein elav, putative [Pediculus humanus corporis]
Length = 373
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/356 (62%), Positives = 263/356 (73%), Gaps = 52/356 (14%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ----------------- 66
E +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK
Sbjct: 38 ESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKAGLTFLLFFRIEMGGGGRERG 97
Query: 67 -------SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSG 119
SLGYGFVNY R EDAE+AI LNGL+LQNK+IKVS+ARPSSE+IK ANLYVSG
Sbjct: 98 RINRILFSLGYGFVNYQRPEDAEKAINTLNGLRLQNKTIKVSFARPSSESIKGANLYVSG 157
Query: 120 LPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQH 179
LPK+MTQ+DLE+LF PYG IITSRILCD I +SKG+GF+RF+Q
Sbjct: 158 LPKNMTQQDLESLFSPYGRIITSRILCD---------------NITGLSKGVGFIRFDQR 202
Query: 180 IEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA---LAANLNAQAAAMRHFAAAMRH 236
+EAE A+ ELNG+IP+ +++PITVKFAN+P+ KA LAA L QAA R
Sbjct: 203 MEAERAISELNGSIPKNSTDPITVKFANNPSNNNKAIPPLAAYLAPQAA---------RR 253
Query: 237 FGNPLHH-SARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPF 295
F P+HH + RF+++PL DLL NSMLP +++GSGWCIFVYNLAPETE+NVLWQLFGPF
Sbjct: 254 FAGPIHHPTGRFRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPF 313
Query: 296 GAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 314 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 369
>gi|194764023|ref|XP_001964131.1| GF21392 [Drosophila ananassae]
gi|190619056|gb|EDV34580.1| GF21392 [Drosophila ananassae]
Length = 353
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/349 (61%), Positives = 257/349 (73%), Gaps = 41/349 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT---------------AQS 67
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK + QS
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQS 81
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK+++Q
Sbjct: 82 LGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNLSQP 141
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
DLE +F YG IITSRILCD ++ +SKG+GF+RF+Q EAE A+Q
Sbjct: 142 DLEGMFASYGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAERAIQ 186
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGNPLH 242
ELNG P+G +EPITVKFAN+P+ AKA L A L QAAA A R L
Sbjct: 187 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAA------ATRRLAGALP 240
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ R +++PL DLL NS+LP ++ GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VK
Sbjct: 241 SAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVK 300
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 VIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 349
>gi|198467583|ref|XP_002134579.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
gi|198149314|gb|EDY73206.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
Length = 353
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/349 (61%), Positives = 258/349 (73%), Gaps = 41/349 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT---------------AQS 67
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK + QS
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQS 81
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK+++Q
Sbjct: 82 LGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNLSQP 141
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
DLE +F +G IITSRILCD ++ +SKG+GF+RF+Q EAE A+Q
Sbjct: 142 DLEGMFASFGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAERAIQ 186
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGNPLH 242
ELNG P+G +EPITVKFAN+P+ AKA L A L QAAA A R L
Sbjct: 187 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAA------ATRRLAGALP 240
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
++ R +++PL DLL NS+LP ++ GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VK
Sbjct: 241 NAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVK 300
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 VIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 349
>gi|386764328|ref|NP_001245647.1| found in neurons, isoform D [Drosophila melanogaster]
gi|194895737|ref|XP_001978329.1| GG17743 [Drosophila erecta]
gi|195045911|ref|XP_001992055.1| GH24423 [Drosophila grimshawi]
gi|195397025|ref|XP_002057129.1| GJ16518 [Drosophila virilis]
gi|195447330|ref|XP_002071166.1| GK25647 [Drosophila willistoni]
gi|195478085|ref|XP_002100403.1| fne [Drosophila yakuba]
gi|190649978|gb|EDV47256.1| GG17743 [Drosophila erecta]
gi|193892896|gb|EDV91762.1| GH24423 [Drosophila grimshawi]
gi|194146896|gb|EDW62615.1| GJ16518 [Drosophila virilis]
gi|194167251|gb|EDW82152.1| GK25647 [Drosophila willistoni]
gi|194187927|gb|EDX01511.1| fne [Drosophila yakuba]
gi|307344716|gb|ADN43900.1| RT06051p [Drosophila melanogaster]
gi|383293360|gb|AFH07361.1| found in neurons, isoform D [Drosophila melanogaster]
Length = 353
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/349 (61%), Positives = 257/349 (73%), Gaps = 41/349 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT---------------AQS 67
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK + QS
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQS 81
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK+++Q
Sbjct: 82 LGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNLSQP 141
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
DLE +F +G IITSRILCD ++ +SKG+GF+RF+Q EAE A+Q
Sbjct: 142 DLEGMFASFGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAERAIQ 186
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGNPLH 242
ELNG P+G +EPITVKFAN+P+ AKA L A L QAAA A R L
Sbjct: 187 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAA------ATRRLAGALP 240
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ R +++PL DLL NS+LP ++ GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VK
Sbjct: 241 SAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVK 300
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 VIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 349
>gi|195133062|ref|XP_002010958.1| GI16282 [Drosophila mojavensis]
gi|193906933|gb|EDW05800.1| GI16282 [Drosophila mojavensis]
Length = 353
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/349 (61%), Positives = 257/349 (73%), Gaps = 41/349 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT---------------AQS 67
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK + QS
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQS 81
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK+++Q
Sbjct: 82 LGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNLSQP 141
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
DLE +F +G IITSRILCD ++ +SKG+GF+RF+Q EAE A+Q
Sbjct: 142 DLEGMFASFGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAERAIQ 186
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGNPLH 242
ELNG P+G +EPITVKFAN+P+ AKA L A L QAAA A R L
Sbjct: 187 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAA------ATRRLAGALP 240
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ R +++PL DLL NS+LP ++ GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VK
Sbjct: 241 SAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVK 300
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 VIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 349
>gi|18860091|ref|NP_572842.1| found in neurons, isoform A [Drosophila melanogaster]
gi|161077787|ref|NP_001096965.1| found in neurons, isoform B [Drosophila melanogaster]
gi|386764326|ref|NP_001245646.1| found in neurons, isoform C [Drosophila melanogaster]
gi|386764332|ref|NP_001245648.1| found in neurons, isoform E [Drosophila melanogaster]
gi|386764334|ref|NP_001245649.1| found in neurons, isoform F [Drosophila melanogaster]
gi|442616163|ref|NP_001259497.1| found in neurons, isoform G [Drosophila melanogaster]
gi|442616165|ref|NP_001259498.1| found in neurons, isoform H [Drosophila melanogaster]
gi|7230770|gb|AAF43091.1|AF239667_1 putative RNA binding protein [Drosophila melanogaster]
gi|22833123|gb|AAF48215.3| found in neurons, isoform A [Drosophila melanogaster]
gi|158031803|gb|ABW09403.1| found in neurons, isoform B [Drosophila melanogaster]
gi|289666819|gb|ADD16464.1| RT06063p1 [Drosophila melanogaster]
gi|383293359|gb|AFH07360.1| found in neurons, isoform C [Drosophila melanogaster]
gi|383293361|gb|AFH07362.1| found in neurons, isoform E [Drosophila melanogaster]
gi|383293362|gb|AFH07363.1| found in neurons, isoform F [Drosophila melanogaster]
gi|440216716|gb|AGB95339.1| found in neurons, isoform G [Drosophila melanogaster]
gi|440216717|gb|AGB95340.1| found in neurons, isoform H [Drosophila melanogaster]
Length = 356
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/352 (61%), Positives = 257/352 (73%), Gaps = 44/352 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA----------------- 65
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK +
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQ 81
Query: 66 -QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
QSLGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK++
Sbjct: 82 GQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNL 141
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+Q DLE +F +G IITSRILCD ++ +SKG+GF+RF+Q EAE
Sbjct: 142 SQPDLEGMFASFGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAER 186
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGN 239
A+QELNG P+G +EPITVKFAN+P+ AKA L A L QAAA A R
Sbjct: 187 AIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAA------ATRRLAG 240
Query: 240 PLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
L + R +++PL DLL NS+LP ++ GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ
Sbjct: 241 ALPSAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQ 300
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 SVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 352
>gi|157114005|ref|XP_001657938.1| RNA-binding protein, putative [Aedes aegypti]
gi|108877490|gb|EAT41715.1| AAEL006675-PA, partial [Aedes aegypti]
Length = 359
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 260/355 (73%), Gaps = 51/355 (14%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA-----------------Q 66
+ +NLIVNY+PQ MTQEE++ LFSS+GEVESCKLIRDK T Q
Sbjct: 25 DSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGESLMYTFLLRFQIFHSGQ 84
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
SLGYGFVNY R EDA +AI LNGL+LQNK IKVS+ARPSSEAIK ANLYVSGLPK+M Q
Sbjct: 85 SLGYGFVNYQRVEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYVSGLPKNMLQ 144
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
DLE+LF PYG IITSRILCD I +SKG+GF+RF+Q +EAE A+
Sbjct: 145 ADLESLFSPYGRIITSRILCD---------------NITGLSKGVGFIRFDQRVEAEKAI 189
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKA--LAANLNAQAAAMRHFAAAMRHFGNPLHH- 243
+ELNGTIP+G++EPITVKFAN+P+ LAA L QAA R F P+HH
Sbjct: 190 KELNGTIPKGSTEPITVKFANNPSNTKTVPPLAAYLGPQAA---------RRFPGPIHHP 240
Query: 244 SARF------KFAPLTADLLNNSMLPPKSL-HGSGWCIFVYNLAPETEDNVLWQLFGPFG 296
+ RF +++PL DLL N+M+P ++ +GSGWCIFVYNLAPETE+NVLWQLFGPFG
Sbjct: 241 TGRFSAIPNYRYSPLAGDLLANTMIPTNAIANGSGWCIFVYNLAPETEENVLWQLFGPFG 300
Query: 297 AVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
AVQ+VKV++D QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 AVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 355
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 20/117 (17%)
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+ ++ NG+ N+ S+ + NL V+ LP+ MTQE++ +LF G + +
Sbjct: 4 KTVMMTNGISADNQQ------NGGSQEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESC 57
Query: 143 RILCDKMASENV--------RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+++ DK+ E++ + F SG S G GFV + + +A A+ LNG
Sbjct: 58 KLIRDKVTGESLMYTFLLRFQIFHSGQ------SLGYGFVNYQRVEDASKAINTLNG 108
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 260/355 (73%), Gaps = 51/355 (14%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-----------------AQ 66
+ +NLIVNY+PQ MTQEE++ LFSS+GEVESCKLIRDK T Q
Sbjct: 25 DSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTENALIHTFLLRFQISHSGQ 84
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
SLGYGFVNY R EDA +AI LNGL+LQNK IKVS+ARPSSEAIK ANLYVSGLPK+M Q
Sbjct: 85 SLGYGFVNYQRVEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYVSGLPKNMLQ 144
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
DLE+LF PYG IITSRILCD I +SKG+GF+RF+Q +EAE A+
Sbjct: 145 ADLESLFSPYGRIITSRILCD---------------NITGLSKGVGFIRFDQRVEAEKAI 189
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKA--LAANLNAQAAAMRHFAAAMRHFGNPLHH- 243
+ELNGTIP+G++EPITVKFAN+P+ LAA L QAA R F P+HH
Sbjct: 190 KELNGTIPKGSTEPITVKFANNPSNTKTVPPLAAYLGPQAA---------RRFPGPIHHP 240
Query: 244 SARF------KFAPLTADLLNNSMLPPKSL-HGSGWCIFVYNLAPETEDNVLWQLFGPFG 296
+ RF +++PL DLL N+M+P ++ +GSGWCIFVYNLAPETE+NVLWQLFGPFG
Sbjct: 241 TGRFSAIPNYRYSPLAGDLLANTMIPTNAIANGSGWCIFVYNLAPETEENVLWQLFGPFG 300
Query: 297 AVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
AVQ+VKV++D QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 301 AVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 355
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+ ++ NG+ N+ S+ + NL V+ LP+ MTQE++ +LF G + +
Sbjct: 4 KTVMMTNGISADNQQ------NGGSQEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESC 57
Query: 143 RILCDKMASEN-------VRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+++ DK+ +EN +R +S + + S G GFV + + +A A+ LNG
Sbjct: 58 KLIRDKV-TENALIHTFLLRFQISHSGQ----SLGYGFVNYQRVEDASKAINTLNG 108
>gi|195352738|ref|XP_002042868.1| GM11591 [Drosophila sechellia]
gi|194126915|gb|EDW48958.1| GM11591 [Drosophila sechellia]
Length = 379
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/349 (61%), Positives = 256/349 (73%), Gaps = 41/349 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT---------------AQS 67
+E +NLIV Y+PQTMTQEE++ LFSS+GE+ESCKL+RDK + QS
Sbjct: 48 DESRTNLIVIYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQS 107
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK+++Q
Sbjct: 108 LGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNLSQP 167
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
DLE +F +G IITSRILCD ++ +SKG+GF+RF+Q EAE A+Q
Sbjct: 168 DLEGMFASFGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAERAIQ 212
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGNPLH 242
ELNG P+G +EPITVKFAN+P+ AKA L A L QAAA A R L
Sbjct: 213 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAA------ATRRLAGALP 266
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ R +++PL DLL NS+LP ++ GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VK
Sbjct: 267 SAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVK 326
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 327 VIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 375
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/361 (59%), Positives = 262/361 (72%), Gaps = 45/361 (12%)
Query: 14 HRSTYQSDVNEQN-SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
H + Q+ E + +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T QSLGYGF
Sbjct: 53 HSPSQQAGAGEDSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGF 112
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
VNY E AE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK MTQ+DLE L
Sbjct: 113 VNYVCAEAAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKSMTQQDLEQL 172
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F PYG IITSRILCD + + +SKG+GFVRF+Q +EAE A++ L+ T
Sbjct: 173 FAPYGGIITSRILCDNITA--------------GLSKGVGFVRFDQRVEAERAIKHLHNT 218
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF---- 247
IPEGA+E ITVKFAN+P+ AKA+ A + + + R F P+HH A RF
Sbjct: 219 IPEGATEAITVKFANNPSNNAKAI--------APLAAYLSPQRRFPGPIHHPANRFRYGL 270
Query: 248 -----------------KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+++PL D+L +L +++G+GWCIFVYNLAP+TE+N+LWQ
Sbjct: 271 PPLSAAAASPLASNPSARYSPLAGDILTTPLLAGNAINGTGWCIFVYNLAPDTEENLLWQ 330
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQ+LNGY LG+R+LQVSFKT+
Sbjct: 331 LFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQTLNGYTLGNRVLQVSFKTN 390
Query: 351 K 351
K
Sbjct: 391 K 391
>gi|158298951|ref|XP_319085.4| AGAP009952-PA [Anopheles gambiae str. PEST]
gi|157014134|gb|EAA13895.5| AGAP009952-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 259/360 (71%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK--------------------- 62
+ +NLIVNY+PQ MTQEE++ LFSS+GEVESCKLIRDK
Sbjct: 24 DSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKPGCVTRHAHTHTYIHLFDGCY 83
Query: 63 -TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP 121
T QSLGYGFVNY R EDA +AI LNGL+LQNK IKVS+ARPSSEAIK ANLYVSGLP
Sbjct: 84 LLTGQSLGYGFVNYQRAEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYVSGLP 143
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIE 181
K+M Q DLE LF PYG IITSRILCD I +SKG+GF+RF+Q +E
Sbjct: 144 KNMLQADLEALFSPYGRIITSRILCD---------------NITGLSKGVGFIRFDQRME 188
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSPAGRAKA--LAANLNAQAAAMRHFAAAMRHFGN 239
AE A++ELNGT+P+G++EPITVKFAN+P+ LAA L QAA R F
Sbjct: 189 AEKAIKELNGTVPKGSTEPITVKFANNPSSTKTVPPLAAYLGPQAA---------RRFPG 239
Query: 240 PLHH-SARF------KFAPLTADLLNNSMLPPKSL-HGSGWCIFVYNLAPETEDNVLWQL 291
P+HH + RF +++PL DLL NSM+P ++ +GSGWCIFVYNLAPETE+NVLWQL
Sbjct: 240 PIHHPTGRFSAIPNYRYSPLAGDLLANSMIPTNAIANGSGWCIFVYNLAPETEENVLWQL 299
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VKV++D QT KCKGFGFV MTNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 300 FGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 359
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/345 (63%), Positives = 261/345 (75%), Gaps = 28/345 (8%)
Query: 12 QSHRS-TYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
Q+ RS + S + +NLIVNY+PQTMTQEE++ LFSS+G+VESCKLIRDK T QSLGY
Sbjct: 11 QNGRSGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGQSLGY 70
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY+R EDAE+AI NGL+LQNK+IKVS+ARPSS+AIK ANLYVSGL K MTQ+DLE
Sbjct: 71 GFVNYHRPEDAEKAINTFNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLSKSMTQQDLE 130
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
NLF YG IITSRILCD I +SKG+GF+RF+Q EAE A+Q+LN
Sbjct: 131 NLFNAYGQIITSRILCD---------------NITGLSKGVGFIRFDQRSEAERAIQQLN 175
Query: 191 GTIPEGASEPITVKFANSPAGRAKA----LAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P+GASEPITVKFAN+P+ LAA L +R F H PL S R
Sbjct: 176 GTTPKGASEPITVKFANNPSNNINKAIPPLAAYL-TPTPNLRRFPPGPIH---PL--SGR 229
Query: 247 F-KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F +++PLT D L +S+L +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV++
Sbjct: 230 FSRYSPLTGD-LGSSVLSANAINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIK 288
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
D QT KCKGFGFV MTNYDEAV A+QSLNGY LG+R+LQVSFKT+
Sbjct: 289 DLQTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGNRVLQVSFKTN 333
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/333 (64%), Positives = 255/333 (76%), Gaps = 28/333 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA-QSLGYGFVNYYRTEDAE 82
+ +NLIVNY+PQTMTQEE++ LFSS+G+VESCKLIRDK TA QSLGYGFVNY+R EDAE
Sbjct: 24 DSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTAGQSLGYGFVNYHRPEDAE 83
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI NGL+LQNK+IKVS+ARPSS+AIK ANLYVSGL K MTQ+DLE LF+PYG IITS
Sbjct: 84 KAINTFNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLSKSMTQQDLEALFQPYGQIITS 143
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RILCD + +SKG+GF+RF+Q EAE A+Q+LNGT P+GASEPIT
Sbjct: 144 RILCDNITG---------------LSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPIT 188
Query: 203 VKFANSPAGRAKA----LAANLNAQAAAMRHFAAAMRHFGNPLHHSARF-KFAPLTADLL 257
VKFAN+P+ LAA L +R F H PL RF +++PLT DL
Sbjct: 189 VKFANNPSNNINKAIPPLAAYLTP-TPNLRRFPPGPIH---PL--GGRFSRYSPLTGDL- 241
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
S+L +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV++D QT KCKGFGF
Sbjct: 242 GTSVLSANAINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGF 301
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
V MTNYDEAV A+QSLNGY LG+R+LQVSFKT+
Sbjct: 302 VTMTNYDEAVVAVQSLNGYTLGNRVLQVSFKTN 334
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 72/247 (29%)
Query: 89 NGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDK 148
NGL+ ++ + + + NL V+ LP+ MTQE++++LF G + + +++ DK
Sbjct: 3 NGLETVQQNGRSGSIGSGGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDK 62
Query: 149 MASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANS 208
+ + S G GFV +++ +AE A+ NG
Sbjct: 63 VTAGQ--------------SLGYGFVNYHRPEDAEKAINTFNG----------------- 91
Query: 209 PAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLH 268
L Q + + + FA ++D + + L
Sbjct: 92 -----------LRLQ------------------NKTIKVSFARPSSDAIKGANL------ 116
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
+V L+ L LF P+G + +++ D T KG GF+ EA
Sbjct: 117 ------YVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAER 170
Query: 329 AIQSLNG 335
AIQ LNG
Sbjct: 171 AIQQLNG 177
>gi|143346991|gb|ABO93208.1| Elav [Platynereis dumerilii]
Length = 361
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/351 (59%), Positives = 255/351 (72%), Gaps = 34/351 (9%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-------- 64
S+ S + +NLIVNY+PQTMTQEE++ LFSS+GEVESCKLIRDK T
Sbjct: 28 SNHSPVSPGAEDSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKATDQSSGTSS 87
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
QSLGYGFVNY R EDAE+AI LNGL+LQNK+IKVSYARPSSE+IK ANLY+SGLPK M
Sbjct: 88 CQSLGYGFVNYKRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYLSGLPKSM 147
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
++ +L +LF G+II RILCD +SKG+GF+RF+Q +EAE
Sbjct: 148 SEPELRSLFSSCGSIINCRILCDNTTG---------------LSKGVGFIRFDQRVEAER 192
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHS 244
A+++LNG +PEGA+EPITVKFAN+P+ L AM + + R F P+HH
Sbjct: 193 AIKQLNGKVPEGATEPITVKFANAPSSNKNQLPI------TAMATYLSPTRRFLGPIHHP 246
Query: 245 A-RF----KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
A RF +F+PL L+ N++L +L+G+GWCIFVYNLAPETE+NVLWQLFGPFGAVQ
Sbjct: 247 AGRFSSASRFSPLDGGLMPNTLLSGNALNGAGWCIFVYNLAPETEENVLWQLFGPFGAVQ 306
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
+VKV+RD QT KCKGFGFV MTNYDEA+ AIQSLNGY LG+R+LQVSFKT+
Sbjct: 307 SVKVIRDFQTQKCKGFGFVTMTNYDEALMAIQSLNGYTLGNRVLQVSFKTN 357
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/341 (61%), Positives = 255/341 (74%), Gaps = 26/341 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 112 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 171
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 172 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 231
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 232 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 281
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 282 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 341
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 342 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 401
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 402 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 442
>gi|157126547|ref|XP_001660922.1| hypothetical protein AaeL_AAEL010567 [Aedes aegypti]
gi|108873228|gb|EAT37453.1| AAEL010567-PA, partial [Aedes aegypti]
Length = 384
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/346 (61%), Positives = 255/346 (73%), Gaps = 41/346 (11%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA--------------QSLG 69
+ +NLIVNY+PQTMTQEE++ LFSS+G+VESCKLIRDK T QSLG
Sbjct: 54 DSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGNWTNSGSFLSFDVGQSLG 113
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDL 129
YGFVNY+R EDA++AI NGL+LQNK+IKVS+ARPSS+AIK ANLYVSGL K MTQ+DL
Sbjct: 114 YGFVNYHRAEDADKAINTFNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLSKSMTQQDL 173
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
E LF+PYG IITSRILCD I +SKG+GF+RF+Q EAE A+Q+L
Sbjct: 174 EALFQPYGQIITSRILCD---------------NITGLSKGVGFIRFDQRSEAERAIQQL 218
Query: 190 NGTIPEGASEPITVKFANSPAGRAKA----LAANLNAQAAAMRHFAAAMRHFGNPLHHSA 245
NGT P+GASEPITVKFAN+P+ LAA L +R F H PL S
Sbjct: 219 NGTTPKGASEPITVKFANNPSNNINKAIPPLAAYLTP-TPNLRRFPPGPIH---PL--SG 272
Query: 246 RF-KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
RF +++PLT DL S+L +++GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+
Sbjct: 273 RFSRYSPLTGDL-GTSVLSANAINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVI 331
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
+D QT KCKGFGFV MTNYDEAV A+QSLNGY LG+R+LQVSFKT+
Sbjct: 332 KDLQTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGNRVLQVSFKTN 377
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/341 (61%), Positives = 255/341 (74%), Gaps = 26/341 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 112 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 171
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 172 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 231
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 232 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 281
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 282 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 341
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 342 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 401
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 402 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 442
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 255/341 (74%), Gaps = 26/341 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 229
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 230 DNITGEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 279
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 280 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 339
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAP+TE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 340 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSN 399
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 400 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 440
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 255/341 (74%), Gaps = 26/341 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 229
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 230 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 279
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 280 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 339
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAP+TE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 340 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSN 399
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 400 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 440
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/341 (61%), Positives = 255/341 (74%), Gaps = 26/341 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 316 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 375
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 376 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 435
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 436 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 485
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 486 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 545
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 546 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 605
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 606 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 646
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
E + NL V+ LP+ M+Q+++ +LF +G + + +++ DK+ +++
Sbjct: 311 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSL------------- 357
Query: 168 SKGIGFVRFNQHIEAEHAMQELNG 191
G GFV + + +AE A+ LNG
Sbjct: 358 --GYGFVNYVKQEDAEKAINALNG 379
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 253/341 (74%), Gaps = 31/341 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 229
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D I +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 230 D---------------NITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 274
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 275 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 334
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAP+TE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 335 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSN 394
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 395 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 435
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 253/341 (74%), Gaps = 31/341 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 229
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D I +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 230 D---------------NITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 274
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 275 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 334
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAP+TE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 335 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSN 394
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 395 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 435
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 255/341 (74%), Gaps = 26/341 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 313 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 372
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 373 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 432
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 433 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 482
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 483 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 542
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAP+TE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 543 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSN 602
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 603 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 643
>gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA binding protein [Branchiostoma
belcheri]
Length = 326
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/333 (62%), Positives = 251/333 (75%), Gaps = 27/333 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +NLIVNY+PQTMTQ+E++ LFSS+GEVESCKLIRDK T QSLGYGFVNY + +
Sbjct: 16 SSTKDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVKPQ 75
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS+AIK ANLYVSGLPK MTQ+DLE LF +G I
Sbjct: 76 DAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPKTMTQQDLEGLFEAHGRI 135
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D + + S+G+GFVRF+Q +EAE A+ ELNG IP+GA++
Sbjct: 136 ITSRILFDPVTGQ---------------SRGVGFVRFDQRVEAERAITELNGHIPKGATD 180
Query: 200 PITVKFANSPA-GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
PITVKFAN+P+ AKAL QAA + A A R+ G LH +ARF+++P+ AD +
Sbjct: 181 PITVKFANNPSQNHAKAL-----QQAA---YLAPARRYLGPMLHQTARFRYSPMGADPMG 232
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+P G+G+CIFVYNLAP+TED+VLWQLFGPFGAV NVKV+RD QT KCKGFGFV
Sbjct: 233 VGNIPNG---GTGFCIFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFV 289
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
M +YDEAV AI LNGY LG R+LQVSFKT+K
Sbjct: 290 TMAHYDEAVVAIAQLNGYCLGGRVLQVSFKTNK 322
>gi|443724444|gb|ELU12456.1| hypothetical protein CAPTEDRAFT_172701 [Capitella teleta]
Length = 359
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/361 (57%), Positives = 255/361 (70%), Gaps = 35/361 (9%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
++S Q D+ + +NLIVNY+PQ+MTQ++++ LFSS+GEVESCKLIRDK T QSLGY
Sbjct: 12 SESAVQVLQRDMKDSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDKATGQSLGY 71
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R EDA +AI LNGL+LQNK+IKVS ARPSSE+IK ANLY+SGLPK+MTQ DLE
Sbjct: 72 GFVNYKRQEDASKAITSLNGLRLQNKTIKVSVARPSSESIKGANLYISGLPKNMTQVDLE 131
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
N+F G IITSRILCD+ ISKG+GF+RF+Q EAE A++ LN
Sbjct: 132 NMFNHCGNIITSRILCDQNTG---------------ISKGVGFIRFDQRHEAERAIKMLN 176
Query: 191 GTIPEGASEPITVKFANSPAGRAKAL---AANLNAQAAAMRHFAAAMRHFGNPLHH-SAR 246
GTIPEGA++PITVKFA P+ L A +A ++ A A R F P+HH + R
Sbjct: 177 GTIPEGATDPITVKFAQHPSSAKNILQVPAVAASATTNPTQYLAPAARRFLGPIHHPTGR 236
Query: 247 FKFA---------------PLTADLLN-NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
F++ PL L+ N+ + ++ GSG+C+FVYNLAPETE+NVLWQ
Sbjct: 237 FRYVEASPGSFSCSLFSLFPLQQRLVGANNFVAGNAVSGSGYCLFVYNLAPETEENVLWQ 296
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAVQNVKVVRD T KCKGFGFV MTNY+EA+ AI +LNG ALGDR+LQVSFK H
Sbjct: 297 LFGPFGAVQNVKVVRDYATLKCKGFGFVTMTNYEEALMAIHALNGIALGDRVLQVSFKKH 356
Query: 351 K 351
K
Sbjct: 357 K 357
>gi|195173668|ref|XP_002027609.1| GL22975 [Drosophila persimilis]
gi|194114534|gb|EDW36577.1| GL22975 [Drosophila persimilis]
Length = 385
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/375 (57%), Positives = 259/375 (69%), Gaps = 61/375 (16%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT---------------AQS 67
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK + QS
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQS 81
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK+++Q
Sbjct: 82 LGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNLSQP 141
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
DLE +F +G IITSRILCD ++ +SKG+GF+RF+Q EAE A+Q
Sbjct: 142 DLEGMFASFGKIITSRILCDNISG---------------LSKGVGFIRFDQRNEAERAIQ 186
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAA-MRHFAAAMRHFG--- 238
ELNG P+G +EPITVKFAN+P+ AKA L A L QAAA R A A+ + G
Sbjct: 187 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAGALPNAGRIS 246
Query: 239 ---NPLHHSARFKFA-----PLTADLLN--------------NSMLPPKSLHGSGWCIFV 276
NP H + T+D ++ NS+LP ++ GSGWCIFV
Sbjct: 247 RSHNPNIHKSEPDLGIGIENKRTSDCMSSYGDTRHWPVIYWPNSILPDNAMTGSGWCIFV 306
Query: 277 YNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGY 336
YNLAPETE+NVLWQLFGPFGAVQ+VKV+RD QT KCKGFGFV MTNYDEAV AIQSLNGY
Sbjct: 307 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 366
Query: 337 ALGDRLLQVSFKTHK 351
LG+R+LQVSFKT+K
Sbjct: 367 TLGNRVLQVSFKTNK 381
>gi|260821286|ref|XP_002605964.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
gi|229291301|gb|EEN61974.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
Length = 330
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/333 (62%), Positives = 251/333 (75%), Gaps = 27/333 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +NLIVNY+PQTMTQ+E++ LFSS+GEVESCKLIRDK T QSLGYGFVNY + +
Sbjct: 20 SSTEDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVKPQ 79
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS+AIK ANLYVSGLPK MTQ+DLE LF +G I
Sbjct: 80 DAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPKTMTQQDLEGLFEAHGRI 139
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D + + S+G+GFVRF+Q +EAE A+ ELNG IP+GA++
Sbjct: 140 ITSRILFDPVTGQ---------------SRGVGFVRFDQRVEAERAITELNGHIPKGATD 184
Query: 200 PITVKFANSPA-GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
PITVKFAN+P+ AKAL QAA + A A R+ G LH +ARF+++P+ AD +
Sbjct: 185 PITVKFANNPSQNHAKAL-----QQAA---YLAPARRYLGPMLHQTARFRYSPMGADPMG 236
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+P G+G+CIFVYNLAP+TED+VLWQLFGPFGAV NVKV+RD QT KCKGFGFV
Sbjct: 237 VGNIPNG---GTGFCIFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFV 293
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
M +YDEAV AI LNGY LG R+LQVSFKT+K
Sbjct: 294 TMAHYDEAVVAIAQLNGYCLGGRVLQVSFKTNK 326
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 246/334 (73%), Gaps = 26/334 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 119 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 178
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 179 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 238
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ P +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 239 DNITDEHA----------PGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 288
Query: 207 NSPAGRAKA---LAANLNAQ-AAAMRHFAAAMR------------HFGNPLHHSARFKFA 250
N+P+ + LAA + Q R F H + S +++
Sbjct: 289 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPTNAAAGAAAAAAAAAIHPNAGRYSSVISRYS 348
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 349 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 408
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 409 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQ 442
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/334 (61%), Positives = 250/334 (74%), Gaps = 26/334 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 121 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 180
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 181 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 240
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ P +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 241 DNITDEHA----------PGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 290
Query: 207 NSPAGRAKA---LAANLNAQAA-------------AMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q+A A AAA H + S +++
Sbjct: 291 NNPSSNKNSMQPLAAYIAPQSARGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 350
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 351 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 410
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 411 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQ 444
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/335 (60%), Positives = 250/335 (74%), Gaps = 26/335 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 98 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 157
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 158 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 217
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ + +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 218 DNITDEHAQG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 267
Query: 207 NSPAGRAKA---LAANLNAQAA-------------AMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 268 NNPSSNKNSMQPLAAYIAPQNARGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 327
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 328 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 387
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ+
Sbjct: 388 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQL 422
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 248/334 (74%), Gaps = 26/334 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 124 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 183
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 184 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 243
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 244 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 293
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 294 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 353
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 354 PLTSDLITNGMIQGNTITSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 413
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 414 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQ 447
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 248/334 (74%), Gaps = 26/334 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 102 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 161
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 162 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 221
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + E+ +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 222 DNITDEHAAG----------LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 271
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 272 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 331
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 332 PLTSDLITNGMIQGNTITSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 391
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 392 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQ 425
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/334 (59%), Positives = 243/334 (72%), Gaps = 31/334 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 229
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D I +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 230 D---------------NITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 274
Query: 207 NSPAGRAKA---LAANLNAQ-AAAMRHFAAAMR------------HFGNPLHHSARFKFA 250
N+P+ + LAA + Q R F H + S +++
Sbjct: 275 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPTNAAAGAAAAAAAAAIHPNAGRYSSVISRYS 334
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PLT+DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 335 PLTSDLITNGMIQGNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 394
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 395 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQ 428
>gi|357617939|gb|EHJ71078.1| putative RNA-binding protein [Danaus plexippus]
Length = 397
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/348 (60%), Positives = 256/348 (73%), Gaps = 29/348 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA-------------QSLGY 70
E +NLI+NY+PQ+MTQEE++ LFSS+GEVESCKLIR+K A QSLGY
Sbjct: 15 ESKTNLIINYLPQSMTQEEIRSLFSSIGEVESCKLIRNKGAAFPDALNHALHGGGQSLGY 74
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
FVNY+R EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK MTQ +LE
Sbjct: 75 AFVNYHRPEDAEKAIATLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKTMTQIELE 134
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
LF PYG IITSRILC+ R F G +SKG+GF+RF+Q +EAE A+QELN
Sbjct: 135 RLFSPYGRIITSRILCENSGG---RPFTGGEQ---GLSKGVGFIRFDQRVEAERAIQELN 188
Query: 191 GTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHF--GNPLH--HSAR 246
GT+P+GA+EPITVKFAN+P+ KALA AA+R F A + F G L +
Sbjct: 189 GTVPKGATEPITVKFANNPSNNGKALAPLAAYLPAALR-FPAPLGRFSSGKSLLAINKGL 247
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
+++PL +LL +LP GS WCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD
Sbjct: 248 QRYSPLAGELLGG-VLP--GAVGSEWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRD 304
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ--VSFKTHKP 352
QT KCKG+GF+ MTNYDEAV AIQSLNGY LG+R+LQ +S++ +P
Sbjct: 305 LQTNKCKGYGFITMTNYDEAVVAIQSLNGYTLGNRVLQEIISYEVQRP 352
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/342 (57%), Positives = 246/342 (71%), Gaps = 48/342 (14%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQEE++ LF+S+GEVESCKLIRDK T QSLGYGFVNY+R EDAE+AI LNGL+LQNK+
Sbjct: 1 MTQEEIRSLFASIGEVESCKLIRDKITGQSLGYGFVNYHRAEDAEKAINTLNGLRLQNKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVS+ARPSSE IK ANLYVSG+PK M Q +LE LF P+G IITSRILCD + +
Sbjct: 61 IKVSFARPSSENIKGANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITA------ 114
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
+SKG+GF+RF+ EAE A+++LNGT+P+GA+EPITVKFAN+P+ K LA
Sbjct: 115 --------GLSKGVGFIRFDTRGEAERAIEKLNGTVPQGATEPITVKFANNPSNSTKGLA 166
Query: 218 ANLNAQAAAMRHFAA----------AMRHFGNPLHHSARF---------KFAPLTADLLN 258
AA + F++ +R FG P+H + R +F+PL D+L
Sbjct: 167 ----PLAAYLPEFSSGAAAAAAAALGVRRFGGPIHPTGRLRYIPLSPLARFSPLAGDILA 222
Query: 259 NSMLP-----------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP 307
+ +LP ++ G+GWCIFVYNLAP+TE++VLWQLFGPFGAVQ+VKV+RD
Sbjct: 223 SPLLPGAAAAAAAAAAGAAIPGTGWCIFVYNLAPDTEESVLWQLFGPFGAVQSVKVIRDL 282
Query: 308 QTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKT 349
QT KCKGFGFV MTNYDEA+ AIQSLNGY LG+R+LQVSFKT
Sbjct: 283 QTNKCKGFGFVTMTNYDEALVAIQSLNGYTLGNRVLQVSFKT 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ-SLGYGFVNYYRT 78
S N + +NL V+ +P+TM Q EL+ LF+ G + + +++ D TA S G GF+ +
Sbjct: 69 SSENIKGANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITAGLSKGVGFIRFDTR 128
Query: 79 EDAERAIIELNGLKLQNKS--IKVSYARPSSEAIK 111
+AERAI +LNG Q + I V +A S + K
Sbjct: 129 GEAERAIEKLNGTVPQGATEPITVKFANNPSNSTK 163
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P T + L LF G V+S K+IRD T + G+GFV ++A AI L
Sbjct: 250 FVYNLAPDT-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEALVAIQSL 308
Query: 89 NGLKLQNKSIKVSY 102
NG L N+ ++VS+
Sbjct: 309 NGYTLGNRVLQVSF 322
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 247/334 (73%), Gaps = 29/334 (8%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 44 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 103
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 104 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 163
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 164 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNS 260
TVKFAN+P+ ++ +QA + + + R + PLHH A RF+F+P+T D + +
Sbjct: 209 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGMTSL 260
Query: 261 M---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGF
Sbjct: 261 VGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 318
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 319 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 352
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 128 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 187
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 188 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 225
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 247/334 (73%), Gaps = 29/334 (8%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 44 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 103
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 104 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 163
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 164 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNS 260
TVKFAN+P+ ++ +QA + + + R + PLHH A RF+F+P+T D + +
Sbjct: 209 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGMTSL 260
Query: 261 M---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGF
Sbjct: 261 VGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 318
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 319 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 352
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 128 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 187
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 188 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 225
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 247/334 (73%), Gaps = 29/334 (8%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 38 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 97
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 98 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 157
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 158 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 202
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNS 260
TVKFAN+P+ ++ +QA + + + R + PLHH A RF+F+P+T D + +
Sbjct: 203 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGMTSL 254
Query: 261 M---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGF
Sbjct: 255 VGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 312
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 313 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 346
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 122 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 181
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 182 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 219
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 247/334 (73%), Gaps = 29/334 (8%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 94 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNS 260
TVKFAN+P+ ++ +QA + + + R + PLHH A RF+F+P+T D + +
Sbjct: 199 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGMTSL 250
Query: 261 M---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGF
Sbjct: 251 VGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 308
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 309 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 342
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 215
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 245/334 (73%), Gaps = 31/334 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 113 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 172
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF P+G IITSRILC
Sbjct: 173 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPFGKIITSRILC 232
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D I +SKG+GF+RF+Q EA+ A++ELNGT P+ ++EPITVKFA
Sbjct: 233 D---------------NITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFA 277
Query: 207 NSPAGRAKA---LAANLNAQ-------------AAAMRHFAAAMRHFGNPLHHSARFKFA 250
N+P+ + LAA + Q A A AAA H + S +++
Sbjct: 278 NNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYS 337
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
PL +DL+ N M+ ++ SGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV+RD Q+
Sbjct: 338 PLASDLITNGMIQGNTITSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSN 397
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQ
Sbjct: 398 KCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQ 431
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 240/334 (71%), Gaps = 31/334 (9%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ IS+G+GF+RF++ EAE A++ LNG P GA+EPIT
Sbjct: 154 RILVD---------------QVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 198
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNN-- 259
VKFAN+P+ + QA + + A R + PLHH + RF+F+P+T D + +
Sbjct: 199 VKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLA 250
Query: 260 --SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGF
Sbjct: 251 GVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 307
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 308 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 341
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 67/224 (29%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRN 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF 236
Query: 116 ----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
+V L + L LF P+G + ++
Sbjct: 237 RFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV--- 293
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 294 ------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 325
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/333 (58%), Positives = 240/333 (72%), Gaps = 28/333 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 31 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 90
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVS LPK M Q+++E LF YG IITS
Sbjct: 91 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITS 150
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D+ V+G+ +S+G+GF+RF++ IEAE A++ LNG P GASEPIT
Sbjct: 151 RILVDQ---------VTGS-----VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPIT 196
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + R + PLHH + RF+F+P+T D + N
Sbjct: 197 VKFANNPSQKT--------GQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTN-- 246
Query: 262 LPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
L SL G +GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 247 LAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFV 306
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 307 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 339
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 68/225 (30%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ-SLGYGFVNYYRT 78
S + +++NL V+ +P+TM Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 114 SSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKR 173
Query: 79 EDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL--------------------- 115
+AE AI LNG K S I V +A S+ +A L
Sbjct: 174 IEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQR 233
Query: 116 -----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+V L + L LF P+G + ++
Sbjct: 234 FRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV-- 291
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 292 -------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 323
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/333 (58%), Positives = 237/333 (71%), Gaps = 29/333 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 31 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 90
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVS LPK M Q+++E LF YG IITS
Sbjct: 91 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITS 150
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GASEPIT
Sbjct: 151 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPIT 195
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + R + PLHH + RF+F+P+T D + N
Sbjct: 196 VKFANNPSQKT--------GQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTN-- 245
Query: 262 LPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
L SL G +GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 246 LAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFV 305
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 306 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 338
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 67/224 (29%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 114 SSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 173
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K S I V +A S+ +A L
Sbjct: 174 EAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRF 233
Query: 116 ----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
+V L + L LF P+G + ++
Sbjct: 234 RFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV--- 290
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 291 ------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 322
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 238/335 (71%), Gaps = 29/335 (8%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ ++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY D
Sbjct: 28 EADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPND 87
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
A++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVS LPK M Q+++E LF YG II
Sbjct: 88 ADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRII 147
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GASEP
Sbjct: 148 TSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEP 192
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + R + PLHH + RF+F+P+T D + N
Sbjct: 193 ITVKFANNPSQKT--------GQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTN 244
Query: 260 SMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
L SL G +GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFG
Sbjct: 245 --LAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFG 302
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 303 FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 337
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 67/224 (29%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 113 SSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 172
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K S I V +A S+ +A L
Sbjct: 173 EAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRF 232
Query: 116 ----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
+V L + L LF P+G + ++
Sbjct: 233 RFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV--- 289
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 290 ------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 321
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 240/334 (71%), Gaps = 31/334 (9%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL + ++ IS+G+GF+RF++ EAE A++ LNG P GA+EPIT
Sbjct: 154 RILVN---------------QVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 198
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNN-- 259
VKFAN+P+ + QA + + A R + PLHH + RF+F+P+T D + +
Sbjct: 199 VKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLA 250
Query: 260 --SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGF
Sbjct: 251 GVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 307
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 308 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 67/224 (29%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ ++ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVNQVTGISRGVGFIRFDKRN 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF 236
Query: 116 ----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
+V L + L LF P+G + ++
Sbjct: 237 RFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV--- 293
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 294 ------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 325
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/335 (57%), Positives = 247/335 (73%), Gaps = 30/335 (8%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 94 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLNN 259
TVKFAN+P+ ++ +QA + + + R + PLHH A RF +F+P+T D + +
Sbjct: 199 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFSRFSPITIDGMTS 250
Query: 260 SM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
+ +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFG
Sbjct: 251 LVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFG 308
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 309 FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 215
>gi|334321532|ref|XP_003340124.1| PREDICTED: ELAV-like protein 4 isoform 2 [Monodelphis domestica]
Length = 347
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/335 (57%), Positives = 246/335 (73%), Gaps = 30/335 (8%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 94 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLNN 259
TVKFAN+P+ + +QA + + + R + PLHH A RF +F+P+T D + +
Sbjct: 199 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFSRFSPITIDGMTS 250
Query: 260 SM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
+ +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFG
Sbjct: 251 LVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFG 308
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 309 FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALL 215
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 242/333 (72%), Gaps = 25/333 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+F+P+T D + +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTS 249
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 250 LAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 309
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI+SLNGY LGDR+LQVSFKT+K
Sbjct: 310 TMTNYDEAAMAIRSLNGYRLGDRVLQVSFKTNK 342
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 67/224 (29%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 116 ----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
+V L + L +F P+G + +++ D
Sbjct: 238 RFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 297
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
++ KG GFV + EA A++ LNG
Sbjct: 298 FNTNK---------------CKGFGFVTMTNYDEAAMAIRSLNG 326
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 239/330 (72%), Gaps = 25/330 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+
Sbjct: 46 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 105
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSR
Sbjct: 106 AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 165
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EPITV
Sbjct: 166 ILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 210
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSML 262
KFAN+P+ + QA + + + R + PL A RF+F+P+T D + +
Sbjct: 211 KFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTSLAG 262
Query: 263 PPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 263 INIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 322
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 323 NYDEAAMAIASLNGYRLGDRVLQVSFKTNK 352
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 128 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 187
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 188 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 225
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 240/333 (72%), Gaps = 25/333 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 47 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 106
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 107 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 166
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 167 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 211
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+F+P+T D + +
Sbjct: 212 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTS 263
Query: 260 SMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 264 LAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 323
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 324 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 132 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 191
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 192 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 229
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 241/333 (72%), Gaps = 25/333 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+F+P+T D + +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTS 249
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 250 LAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 309
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 342
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 241/333 (72%), Gaps = 25/333 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+F+P+T D + +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTS 249
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 250 LAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 309
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 342
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|221316773|ref|NP_001138249.1| ELAV-like protein 4 isoform 5 [Homo sapiens]
gi|114556458|ref|XP_001135525.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 9 [Pan troglodytes]
gi|332219805|ref|XP_003259048.1| PREDICTED: ELAV-like protein 4 isoform 3 [Nomascus leucogenys]
gi|397518908|ref|XP_003829617.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pan paniscus]
gi|402854507|ref|XP_003891909.1| PREDICTED: ELAV-like protein 4 isoform 3 [Papio anubis]
gi|426329577|ref|XP_004025815.1| PREDICTED: ELAV-like protein 4 isoform 3 [Gorilla gorilla gorilla]
gi|119627250|gb|EAX06845.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_e [Homo sapiens]
gi|221041752|dbj|BAH12553.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 44 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 103
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 104 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 163
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 164 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 209 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 260
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 261 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 318
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 319 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 365
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 128 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 187
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 188 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 247
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 248 RLDNLLNMAYGVKRFSPITIDGMTS 272
>gi|221316767|ref|NP_001138246.1| ELAV-like protein 4 isoform 2 [Homo sapiens]
gi|384475927|ref|NP_001245109.1| ELAV-like protein 4 [Macaca mulatta]
gi|114556464|ref|XP_001135692.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 11 [Pan troglodytes]
gi|332219803|ref|XP_003259047.1| PREDICTED: ELAV-like protein 4 isoform 2 [Nomascus leucogenys]
gi|395855037|ref|XP_003799978.1| PREDICTED: ELAV-like protein 4 isoform 1 [Otolemur garnettii]
gi|397518904|ref|XP_003829615.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pan paniscus]
gi|402854505|ref|XP_003891908.1| PREDICTED: ELAV-like protein 4 isoform 2 [Papio anubis]
gi|426329575|ref|XP_004025814.1| PREDICTED: ELAV-like protein 4 isoform 2 [Gorilla gorilla gorilla]
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]
gi|380810346|gb|AFE77048.1| ELAV-like protein 4 isoform 2 [Macaca mulatta]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|297664981|ref|XP_002810891.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pongo abelii]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|297664975|ref|XP_002810888.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pongo abelii]
Length = 369
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 44 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 103
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 104 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 163
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 164 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 209 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 260
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 261 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 318
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 319 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 365
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 128 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 187
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 188 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 247
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 248 RLDNLLNMAYGVKRFSPITIDGMTS 272
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 40 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 99
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 100 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 159
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 160 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 204
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 205 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 256
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 257 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 314
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 315 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 361
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 124 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 183
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 184 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 243
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 244 RLDNLLNMAYGVKRFSPITIDGMTS 268
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|395855039|ref|XP_003799979.1| PREDICTED: ELAV-like protein 4 isoform 2 [Otolemur garnettii]
Length = 383
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 58 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 117
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 118 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 177
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 178 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 223 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 274
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 275 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 332
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 333 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 261
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 262 RLDNLLNMAYGVKRFSPITIDGMTS 286
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 39 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 98
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 99 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 158
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 159 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 203
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 204 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 255
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 256 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 313
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 314 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 360
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 123 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 182
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 183 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 242
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 243 RLDNLLNMAYGVKRFSPITIDGMTS 267
>gi|254281262|ref|NP_001156871.1| ELAV-like protein 4 isoform d [Mus musculus]
gi|73977013|ref|XP_860413.1| PREDICTED: ELAV-like protein 4 isoform 17 [Canis lupus familiaris]
gi|291398928|ref|XP_002715152.1| PREDICTED: ELAV-like 4-like isoform 3 [Oryctolagus cuniculus]
gi|354468152|ref|XP_003496531.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cricetulus griseus]
gi|426215484|ref|XP_004002002.1| PREDICTED: ELAV-like protein 4 isoform 2 [Ovis aries]
Length = 371
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|348554577|ref|XP_003463102.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cavia porcellus]
gi|354468154|ref|XP_003496532.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cricetulus griseus]
Length = 383
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 58 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 117
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 118 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 177
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 178 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 223 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 274
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 275 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 332
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 333 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 261
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 262 RLDNLLNMAYGVKRFSPITIDGMTS 286
>gi|194207476|ref|XP_001492529.2| PREDICTED: ELAV-like protein 4 isoform 2 [Equus caballus]
Length = 383
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 58 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 117
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 118 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 177
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 178 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 223 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 274
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 275 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 332
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 333 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 261
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 262 RLDNLLNMAYGVKRFSPITIDGMTS 286
>gi|221316769|ref|NP_001138247.1| ELAV-like protein 4 isoform 3 [Homo sapiens]
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]
Length = 383
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 58 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 117
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 118 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 177
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 178 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 223 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 274
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 275 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 332
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 333 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 261
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 262 RLDNLLNMAYGVKRFSPITIDGMTS 286
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|221042398|dbj|BAH12876.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 7 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 66
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 67 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 126
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 127 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 171
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 172 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 223
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 224 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 281
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 282 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 328
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 91 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 150
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 151 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 210
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 211 RLDNLLNMAYGVKRFSPITIDGMTS 235
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|326925350|ref|XP_003208879.1| PREDICTED: ELAV-like protein 4-like [Meleagris gallopavo]
Length = 379
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 54 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 113
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 114 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 173
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 174 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 218
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 219 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 270
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 271 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 328
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 329 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 375
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 138 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 197
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 198 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 257
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 258 RLDNLLNMAYGVKRFSPITIDGMTS 282
>gi|224058156|ref|XP_002196701.1| PREDICTED: ELAV-like protein 4 [Taeniopygia guttata]
Length = 371
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|334321530|ref|XP_001373647.2| PREDICTED: ELAV-like protein 4 isoform 1 [Monodelphis domestica]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|327264130|ref|XP_003216869.1| PREDICTED: ELAV-like protein 3-like [Anolis carolinensis]
Length = 386
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 241/347 (69%), Gaps = 41/347 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY + DA
Sbjct: 60 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDSNDA 119
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 120 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 179
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ + +S+G+GF+RF++ IEAE A++ LNG P GASEPI
Sbjct: 180 SRILVDQVTA--------------GVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPI 225
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + R + PLHH + RF
Sbjct: 226 TVKFANNPSQKT--------GQALLTHLYQTTARRYTGPLHHQTQRFRLDNLLNMAYGVK 277
Query: 248 KFAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + L +L G +GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+
Sbjct: 278 RFSPITIDSMTS--LAGVNLTGASSAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVI 335
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 336 RDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRILQVSFKTSK 382
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ-SLGYGFVNYYRT 78
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ TA S G GF+ + +
Sbjct: 144 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTAGVSRGVGFIRFDKR 203
Query: 79 EDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE 127
+AE AI LNG K S I V +A S+ +A +LY +G H TQ
Sbjct: 204 IEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQR 263
Query: 128 -DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 264 FRLDNLLNMAYGVKRFSPITIDSMTS 289
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 35 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 94
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 95 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 154
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 155 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPI 199
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 200 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 251
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 252 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 309
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 119 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 178
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 179 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 238
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 239 RLDNLLNMAYGVKRFSPITIDGMTS 263
>gi|410921400|ref|XP_003974171.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 4-like [Takifugu
rubripes]
Length = 414
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 248/346 (71%), Gaps = 30/346 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 78 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 137
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 138 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 197
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ V SG S+G+GF+RF++ +EAE A++ LNG P GA+EPIT
Sbjct: 198 RILVDQVTGARVCLXSSGPAG---GSRGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPIT 254
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------K 248
VKFAN+P+ + +QA + + + R + PLHH A RF +
Sbjct: 255 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 306
Query: 249 FAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+R
Sbjct: 307 FSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 364
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 365 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 410
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ------------S 67
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S
Sbjct: 161 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGARVCLXSSGPAGGS 220
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS---- 118
G GF+ + + +AE AI LNG K + I V +A S+ +A LY S
Sbjct: 221 RGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRR 280
Query: 119 --GLPKHMTQE-DLENLFR-PYGTIITSRILCDKMAS 151
G H Q L+NL YG S I D M S
Sbjct: 281 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDSMTS 317
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/333 (57%), Positives = 240/333 (72%), Gaps = 25/333 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+F+P+T D + +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTS 249
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 250 LAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 309
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQ SFKT+K
Sbjct: 310 TMTNYDEAAMAIASLNGYRLGDRVLQXSFKTNK 342
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|395730526|ref|XP_003775742.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 402
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 77 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 136
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 137 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 196
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 197 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 242 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 293
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 294 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 351
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 352 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 161 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 220
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 221 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 280
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 281 RLDNLLNMAYGVKRFSPITIDGMTS 305
>gi|291398930|ref|XP_002715153.1| PREDICTED: ELAV-like 4-like isoform 4 [Oryctolagus cuniculus]
Length = 402
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 77 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 136
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 137 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 196
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 197 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 242 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 293
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 294 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 351
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 352 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 161 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 220
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 221 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 280
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 281 RLDNLLNMAYGVKRFSPITIDGMTS 305
>gi|332219807|ref|XP_003259049.1| PREDICTED: ELAV-like protein 4 isoform 4 [Nomascus leucogenys]
gi|332808951|ref|XP_001135610.2| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 10 [Pan troglodytes]
gi|397518906|ref|XP_003829616.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pan paniscus]
gi|402854509|ref|XP_003891910.1| PREDICTED: ELAV-like protein 4 isoform 4 [Papio anubis]
gi|426329579|ref|XP_004025816.1| PREDICTED: ELAV-like protein 4 isoform 4 [Gorilla gorilla gorilla]
gi|119627246|gb|EAX06841.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Homo sapiens]
Length = 402
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 77 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 136
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 137 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 196
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 197 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 242 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 293
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 294 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 351
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 352 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 161 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 220
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 221 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 280
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 281 RLDNLLNMAYGVKRFSPITIDGMTS 305
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 85 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 144
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 145 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 204
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 205 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 249
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 250 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 301
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 302 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 359
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 360 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 406
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 169 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 228
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 229 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 288
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 289 RLDNLLNMAYGVKRFSPITIDGMTS 313
>gi|390465922|ref|XP_003733491.1| PREDICTED: ELAV-like protein 4 isoform 4 [Callithrix jacchus]
gi|403258121|ref|XP_003921627.1| PREDICTED: ELAV-like protein 4 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 402
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 77 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 136
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 137 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 196
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 197 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 242 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 293
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 294 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 351
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 352 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 161 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 220
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 221 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 280
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 281 RLDNLLNMAYGVKRFSPITIDGMTS 305
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 94 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 153
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 154 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 213
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 214 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 258
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 259 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 310
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 311 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 368
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 369 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 415
>gi|259013331|ref|NP_001158376.1| Hu/elav protein [Saccoglossus kowalevskii]
gi|32307761|gb|AAP79277.1| Hu/elav [Saccoglossus kowalevskii]
Length = 357
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 241/347 (69%), Gaps = 39/347 (11%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA---------------QSL 68
+ +NLI+NY+PQTMTQEE++ LFSS+GE+ESCKLIRDK T QSL
Sbjct: 34 DSKTNLIINYLPQTMTQEEIKSLFSSIGEIESCKLIRDKVTGTCPADIQESEFAERGQSL 93
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
GY FVNY++ DAE+AI LNGL+LQ K+IKVSYARPSS+AIK ANLYV GLPK M Q+D
Sbjct: 94 GYAFVNYHKAADAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVCGLPKTMAQKD 153
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
LE +F G IITSRILCD + S+G+GF+RF++ EAE A++
Sbjct: 154 LEEMFTSCGRIITSRILCDSVTGH---------------SRGVGFIRFDKRTEAEEAIKR 198
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR-F 247
NGTIP GA + ITVKFAN+P+ +A+A + A+ R + PLHH R F
Sbjct: 199 YNGTIPPGAVDAITVKFANNPSQN--------HAKALQQAYLASPTRRYPGPLHHQTRNF 250
Query: 248 KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP 307
+++P+ ++L N + + +G GWCIFVYNL+PETE+++LWQLFGPFGAV NVKV+RD
Sbjct: 251 RYSPMGGEILGNVGINSINNNGQGWCIFVYNLSPETEESLLWQLFGPFGAVTNVKVMRDF 310
Query: 308 QTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPLP 354
T KCKGFGFV MTNYDEAV AI LNGYALG R+LQVSFKT+K P
Sbjct: 311 STNKCKGFGFVTMTNYDEAVVAIAXLNGYALGARVLQVSFKTNKHKP 357
>gi|348509183|ref|XP_003442131.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oreochromis
niloticus]
Length = 359
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 241/347 (69%), Gaps = 43/347 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ + IS+G+GF+RF++ EAE A++ LNG P GA+EPIT
Sbjct: 154 RILVDQVTAG--------------ISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 199
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------------K 248
VKFAN+P+ + QA + + A R + PLHH + RF +
Sbjct: 200 VKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKR 251
Query: 249 FAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
F+P+T D + + ++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+
Sbjct: 252 FSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVI 308
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 309 RDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ-SLGYGFVNYYRT 78
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ TA S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKR 176
Query: 79 EDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A LY +G H TQ
Sbjct: 177 NEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQR 236
Query: 128 -DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 237 FRLDNLLNASYGVKRFSPITIDSMTS 262
>gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]
Length = 359
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 241/347 (69%), Gaps = 43/347 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ + IS+G+GF+RF++ EAE A++ LNG P GA+EPIT
Sbjct: 154 RILVDQVTAG--------------ISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 199
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------------K 248
VKFAN+P+ + QA + + A R + PLHH + RF +
Sbjct: 200 VKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKR 251
Query: 249 FAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
F+P+T D + + ++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+
Sbjct: 252 FSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVI 308
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 309 RDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ-SLGYGFVNYYRT 78
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ TA S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKR 176
Query: 79 EDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A LY +G H TQ
Sbjct: 177 NEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQR 236
Query: 128 -DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 237 FRLDNLLNASYGVKRFSPITIDSMTS 262
>gi|410902665|ref|XP_003964814.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 240/347 (69%), Gaps = 44/347 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ IS+G+GF+RF++ EAE A++ LNG P GA+EPIT
Sbjct: 154 RILVD---------------QVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 198
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------------K 248
VKFAN+P+ + QA + + A R + PLHH + RF +
Sbjct: 199 VKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKR 250
Query: 249 FAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
F+P+T D + + ++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+
Sbjct: 251 FSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVI 307
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 308 RDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 354
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRN 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY +G H TQ
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF 236
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 237 RLDNLLNASYGVKRFSPITIDSMTS 261
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/349 (55%), Positives = 240/349 (68%), Gaps = 45/349 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 33 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDA 92
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IIT
Sbjct: 93 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIIT 152
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ IS+G+GF+RF++ EAE A++ LNG P GA+EPI
Sbjct: 153 SRILVD---------------QVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPI 197
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + + A R + PLHH + RF
Sbjct: 198 TVKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVK 249
Query: 248 -KFAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+F+P+T D + + ++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVK
Sbjct: 250 SRFSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVK 306
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 307 VIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRN 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY +G H TQ
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF 236
Query: 128 DLENLFR-PYGTIITSR---ILCDKMAS 151
L+NL YG + SR I D M S
Sbjct: 237 RLDNLLNASYG--VKSRFSPITIDSMTS 262
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 238/342 (69%), Gaps = 36/342 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ ++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY D
Sbjct: 28 EADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPND 87
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
A++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVS LPK M Q+++E LF YG II
Sbjct: 88 ADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRII 147
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GASEP
Sbjct: 148 TSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEP 192
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------KFAPL 252
ITVKFAN+P+ + QA + R + PLHH + RF +F+P+
Sbjct: 193 ITVKFANNPSQKT--------GQALLTHLYQTTARRYTGPLHHQTQRFSPLSILPRFSPI 244
Query: 253 TADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQT 309
T D + N L SL G +GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T
Sbjct: 245 TIDSVTN--LAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTT 302
Query: 310 YKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 303 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 344
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 113 SSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 172
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K S I V +A S+ +A L
Sbjct: 173 EAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALL 210
>gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]
Length = 356
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 240/348 (68%), Gaps = 44/348 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 31 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDA 90
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IIT
Sbjct: 91 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIIT 150
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ IS+G+GF+RF++ EAE A++ LNG P GA+EPI
Sbjct: 151 SRILVD---------------QVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPI 195
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + + A R + PLHH + RF
Sbjct: 196 TVKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVK 247
Query: 248 KFAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV 303
+F+P+T D + + ++ P G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV
Sbjct: 248 RFSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 304
Query: 304 VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 305 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 352
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 115 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRN 174
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY +G H TQ
Sbjct: 175 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF 234
Query: 128 DLENLFRP-YGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 235 RLDNLLNASYGVKRFSPITIDSMTS 259
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 240/334 (71%), Gaps = 25/334 (7%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +
Sbjct: 306 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 365
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG I
Sbjct: 366 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 425
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+E
Sbjct: 426 ITSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATE 470
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLN 258
PITVKFAN+P+ + QA + + + R + PL A RF+F+P+T D +
Sbjct: 471 PITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMT 522
Query: 259 N-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 523 SLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 582
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQ SFKT+K
Sbjct: 583 VTMTNYDEAAMAIASLNGYRLGDRVLQXSFKTNK 616
>gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]
Length = 371
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK M Q++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMIQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM Q+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMIQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVG---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 258 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 315
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 316 RDFNTNKCKGFGFVTMTNYDEAAMAITSLNGYRLGDRVLQVSFKTNK 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ + T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVGQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 244
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 245 RLDNLLNMAYGVKRFSPITIDGMTS 269
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/382 (52%), Positives = 248/382 (64%), Gaps = 70/382 (18%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQTM+QEE++ LFSS+GE++SCKL+RDK T QSLGYGFVNY R EDA +
Sbjct: 100 ESKTNLIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQSLGYGFVNYVRQEDALK 159
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
A+ LNGL+LQNK+IKVS+ARPSSE+IK ANLYVSGLPK M+Q +LENLFRPYG IITSR
Sbjct: 160 AVSTLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLPKSMSQPELENLFRPYGQIITSR 219
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D I +SKG+GFVRF++ EAE A+ +LNGTIP G +EP+TV
Sbjct: 220 ILSD---------------NITGLSKGVGFVRFDRKGEAEVAISKLNGTIPAGCTEPVTV 264
Query: 204 KFANSPAGRAKA--LAANLNAQAAA---------MRHFAAAMRHFG-NPLHHS---ARFK 248
KFAN+PA A+ L AQAA+ AA R FG P+HH+ RF+
Sbjct: 265 KFANNPAANAQKAQLQVQDVAQAASALMPLALLNTAAVAATGRRFGAGPIHHTPQAGRFR 324
Query: 249 FAPLTA------------DLLNNSMLPPKSLHG--------------------------- 269
++PL + DLL +L + G
Sbjct: 325 YSPLASVAGSTSNAAASQDLLTTQLLQMAAASGANASPAQLAALTTPPATAAAAVAATGA 384
Query: 270 -SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
SGWCIFVYNLAPETED++LWQLFGPFGAV +VK++RD T KCKG+GFV M Y++AV
Sbjct: 385 SSGWCIFVYNLAPETEDSILWQLFGPFGAVLSVKIIRDFATGKCKGYGFVTMGQYEDAVT 444
Query: 329 AIQSLNGYALGDRLLQVSFKTH 350
AI +LNG LG+R LQVSFK
Sbjct: 445 AITALNGTQLGNRTLQVSFKAQ 466
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 39/346 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 71 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 130
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 131 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 190
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ G S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 191 RILVDQVTGP-----TGG-------SRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPIT 238
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------K 248
VKFAN+P+ + +QA + + + R + PLHH A RF +
Sbjct: 239 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 290
Query: 249 FAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+R
Sbjct: 291 FSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 348
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 349 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 394
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 16/148 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT---TAQSLGYGFVNYY 76
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ +
Sbjct: 154 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFD 213
Query: 77 RTEDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMT 125
+ +AE AI LNG K + I V +A S+ +A LY S G H
Sbjct: 214 KRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQA 273
Query: 126 QE-DLENLFR-PYGTIITSRILCDKMAS 151
Q L+NL YG S I D M S
Sbjct: 274 QRFRLDNLLNMAYGVKRFSPITIDSMTS 301
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/335 (57%), Positives = 239/335 (71%), Gaps = 27/335 (8%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA---RFKFAPLTADLL 257
ITVKFAN+P+ + QA + + + R + PL A R +F+P+T D +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRSRFSPMTIDGM 249
Query: 258 NNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
+ H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFG
Sbjct: 250 TSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFG 309
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 344
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 39/346 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 40 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 99
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 100 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 159
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ G S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 160 RILVDQVTGP-----TGG-------SRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPIT 207
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------K 248
VKFAN+P+ + +QA + + + R + PLHH A RF +
Sbjct: 208 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 259
Query: 249 FAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+R
Sbjct: 260 FSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 317
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 318 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 363
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 16/148 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT---TAQSLGYGFVNYY 76
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ +
Sbjct: 123 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFD 182
Query: 77 RTEDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMT 125
+ +AE AI LNG K + I V +A S+ +A LY S G H
Sbjct: 183 KRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQA 242
Query: 126 QE-DLENLFR-PYGTIITSRILCDKMAS 151
Q L+NL YG S I D M S
Sbjct: 243 QRFRLDNLLNMAYGVKRFSPITIDSMTS 270
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 39/346 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 84 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 143
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 144 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 203
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ G S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 204 RILVDQVTGP-----TGG-------SRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPIT 251
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------K 248
VKFAN+P+ + +QA + + + R + PLHH A RF +
Sbjct: 252 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 303
Query: 249 FAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+R
Sbjct: 304 FSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 361
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 362 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 407
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 16/148 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT---TAQSLGYGFVNYY 76
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ +
Sbjct: 167 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFD 226
Query: 77 RTEDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMT 125
+ +AE AI LNG K + I V +A S+ +A LY S G H
Sbjct: 227 KRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQA 286
Query: 126 QE-DLENLFR-PYGTIITSRILCDKMAS 151
Q L+NL YG S I D M S
Sbjct: 287 QRFRLDNLLNMAYGVKRFSPITIDSMTS 314
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 239/334 (71%), Gaps = 25/334 (7%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +
Sbjct: 60 SNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 119
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG I
Sbjct: 120 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 179
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+E
Sbjct: 180 ITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATE 224
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLN 258
PITVKFAN+P+ + + + + R + PL A RF+F+P+T D +
Sbjct: 225 PITVKFANNPSQKVN--------HTILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMT 276
Query: 259 N-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 277 SLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 336
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 337 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 370
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 247/347 (71%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 58 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 117
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 118 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 177
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 178 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 223 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 274
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 275 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 332
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 333 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 261
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 262 RLDNLLNMAYGVKRFSPITIDGMTS 286
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L LF G V + K+IRD T + G+GFV ++A AI LNG +L ++ ++VS+
Sbjct: 316 LWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 375
Query: 103 ARPSSEA 109
+E
Sbjct: 376 KTNKAEG 382
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 240/334 (71%), Gaps = 26/334 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 121
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 122 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 181
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 182 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 226
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLN 258
ITVKFAN+P+ + QA + + + R + PL A RF +F+P+T D +
Sbjct: 227 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMT 278
Query: 259 NSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 279 SLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 338
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 339 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 372
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 206
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 207 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 244
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 239/331 (72%), Gaps = 26/331 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSR
Sbjct: 96 AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 155
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EPITV
Sbjct: 156 ILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLNNSM 261
KFAN+P+ + QA + + + R + PL A RF +F+P+T D + +
Sbjct: 201 KFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMTSLA 252
Query: 262 LPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV M
Sbjct: 253 GINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTM 312
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
TNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 313 TNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 241/334 (72%), Gaps = 26/334 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLN 258
ITVKFAN+P+ + QA + + + R + PL A RF +F+P+T D +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRRFSPMTIDGMT 249
Query: 259 N-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 250 SLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 309
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 245/347 (70%), Gaps = 43/347 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 114 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 173
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 174 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 233
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 234 RILVDQVTGG---------------SRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPIT 278
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------- 247
VKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 279 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKS 330
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 331 RFSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 388
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 389 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 435
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 197 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRI 256
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 257 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALL 294
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 240/334 (71%), Gaps = 26/334 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLN 258
ITVKFAN+P+ + QA + + + R + PL A RF +F+P+T D +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMT 249
Query: 259 NSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 250 SLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 309
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 240/334 (71%), Gaps = 26/334 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLN 258
ITVKFAN+P+ + QA + + + R + PL A RF +F+P+T D +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMT 249
Query: 259 NSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 250 SLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 309
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 245/346 (70%), Gaps = 42/346 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 152 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 211
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 212 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 271
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 272 RILVDQVTGG---------------SRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPIT 316
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------K 248
VKFAN+P+ + +QA + + + R + PLHH A RF +
Sbjct: 317 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 368
Query: 249 FAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+R
Sbjct: 369 FSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 426
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 427 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 472
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 235 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRI 294
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 295 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 354
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 355 RLDNLLNMAYGVKRFSPITIDSMTS 379
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 39/346 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 76 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 135
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 136 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 195
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ G S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 196 RILVDQVTGP-----TGG-------SRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPIT 243
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------K 248
VKFAN+P+ + +QA + + + R + PLHH A RF +
Sbjct: 244 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 295
Query: 249 FAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+R
Sbjct: 296 FSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 353
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 354 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 399
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 16/148 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT---TAQSLGYGFVNYY 76
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ +
Sbjct: 159 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFD 218
Query: 77 RTEDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMT 125
+ +AE AI LNG K + I V +A S+ +A LY S G H
Sbjct: 219 KRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQA 278
Query: 126 QE-DLENLFR-PYGTIITSRILCDKMAS 151
Q L+NL YG S I D M S
Sbjct: 279 QRFRLDNLLNMAYGVKRFSPITIDSMTS 306
>gi|45382273|ref|NP_990161.1| ELAV-like protein 4 [Gallus gallus]
gi|5739519|gb|AAD50508.1|AF176675_1 RNA-binding protein HuD [Gallus gallus]
Length = 371
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGP GAV NVKV+
Sbjct: 263 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPSGAVNNVKVI 320
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 321 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 249
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 250 RLDNLLNMAYGVKRFSPITIDGMTS 274
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 241/334 (72%), Gaps = 26/334 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLN 258
ITVKFAN+P+ + QA + + + R + PL A RF +F+P+T D +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMT 249
Query: 259 N-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 250 SLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 309
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 242/333 (72%), Gaps = 25/333 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ+MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 32 NTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKD 91
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 92 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 151
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D+ V+G +S+G+GF+RF++ IEAE A++ LNG P A+EP
Sbjct: 152 TSRILVDQ---------VTG------MSRGVGFIRFDKRIEAEEAIKGLNGQKPPAATEP 196
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+F P+T D + +
Sbjct: 197 ITVKFANNPSQKTN--------QAILSQLYHSPNRRYPAPLAQQAQRFRFPPMTIDGMTS 248
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 249 LAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 308
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 309 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 341
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLK--LQNKSIKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 177 EAEEAIKGLNGQKPPAATEPITVKFANNPSQKTNQAIL 214
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 382 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 441
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 442 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 501
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 502 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 546
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 547 TVKFANNPSQK--------TSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 598
Query: 248 KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+
Sbjct: 599 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 656
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 657 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 703
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 466 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 525
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 526 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 585
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 586 RLDNLLNMAYGVKRFSPITIDGMTS 610
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 240/355 (67%), Gaps = 51/355 (14%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 31 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDA 90
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+D+E LF YG IIT
Sbjct: 91 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIIT 150
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ IS+G+GF+RF++ EAE A++ LNG P GA+EPI
Sbjct: 151 SRILVD---------------QVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPI 195
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + + A R + PLHH + RF
Sbjct: 196 TVKFANNPSQKT--------GQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVK 247
Query: 248 -------KFAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFG 296
+F+P+T D + + ++ P G+GWCIFVYNL+PE +++VLWQLFGPFG
Sbjct: 248 SSPTLFPRFSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPEADESVLWQLFGPFG 304
Query: 297 AVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
AV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 305 AVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 359
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q++++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 115 SSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRN 174
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 175 EAEEAIKGLNGQK 187
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSTCSPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSACSPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 240/334 (71%), Gaps = 26/334 (7%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ +S+G+GF+RF++ IEAE A++ LNG P A+EP
Sbjct: 153 TSRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLLN 258
ITVKFAN+P+ + QA + + + R + PL A RF +F+P+T D +
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMT 249
Query: 259 N-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGF
Sbjct: 250 SLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 309
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPSATEPITVKFANNPSQKTNQAIL 215
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 38 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 97
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 98 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 157
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 158 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 202
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 203 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 254
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 255 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 312
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 313 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 372
Query: 351 K 351
K
Sbjct: 373 K 373
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 122 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 181
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 182 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 219
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 161 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 206 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 257
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 258 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 315
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 316 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 375
Query: 351 K 351
K
Sbjct: 376 K 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 222
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 263 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 320
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 321 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 380
Query: 351 K 351
K
Sbjct: 381 K 381
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 227
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 94 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 199 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 250
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 251 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 308
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 309 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 368
Query: 351 K 351
K
Sbjct: 369 K 369
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 215
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 263 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 320
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 321 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 380
Query: 351 K 351
K
Sbjct: 381 K 381
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 227
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 247/361 (68%), Gaps = 56/361 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 263 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 320
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+
Sbjct: 321 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 380
Query: 351 K 351
K
Sbjct: 381 K 381
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 227
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 241/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 250 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI+SLNGY LGDR+LQVSFKT+K
Sbjct: 310 DFNTNKCKGFGFVTMTNYDEAAMAIRSLNGYRLGDRVLQVSFKTNK 355
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 238 RLDNLLNMAYGVKRFSPMTIDGMTS 262
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 241/346 (69%), Gaps = 43/346 (12%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEK 95
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF +G IITSR
Sbjct: 96 AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSR 155
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D ++ +S+G+GF+RF++ +EAE A++ LNG P GA+EPITV
Sbjct: 156 ILVD---------------QVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITV 200
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF--------------K 248
KFAN+P+ ++ +QA + + R + PL A RF +
Sbjct: 201 KFANNPSQKS--------SQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSR 252
Query: 249 FAPLTAD---LLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D L LP + G+GWCIFVYNLAP+ ++NVLWQ+FGPFGAV NVKV+R
Sbjct: 253 FSPMTIDGVTSLAGINLPAHA--GTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIR 310
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 311 DFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 356
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + R
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRV 177
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 178 EAEEAIKGLNGQK 190
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
P+ + NL V+ LP++MTQE+L++LF G I + +++ DK+ +
Sbjct: 31 PNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ------------ 78
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNG 191
S G GFV + + +AE A+ LNG
Sbjct: 79 ---SLGYGFVNYMEPKDAEKAINTLNG 102
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 239/335 (71%), Gaps = 26/335 (7%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +
Sbjct: 31 SNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 90
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG I
Sbjct: 91 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 150
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+E
Sbjct: 151 ITSRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATE 195
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLL 257
PITVKFAN+P+ + + + + R + PL A RF +F+P+T D +
Sbjct: 196 PITVKFANNPSQKVN--------HTILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGM 247
Query: 258 NN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFG
Sbjct: 248 TSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFG 307
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 308 FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 342
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 47 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 106
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 107 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 166
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 167 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 211
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 212 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 263
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 264 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 323
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 324 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 369
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 132 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 191
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 192 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 251
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 252 RLDNLLNMAYGVKRFSPMTIDGMTS 276
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 47 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 106
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 107 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 166
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 167 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 211
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 212 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 263
Query: 248 --KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 264 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 323
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 324 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 370
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 132 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 191
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 192 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 229
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 241/346 (69%), Gaps = 43/346 (12%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+
Sbjct: 65 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEK 124
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF +G IITSR
Sbjct: 125 AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSR 184
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D ++ +S+G+GF+RF++ +EAE A++ LNG P GA+EPITV
Sbjct: 185 ILVD---------------QVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITV 229
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF--------------K 248
KFAN+P+ ++ +QA + + R + PL A RF +
Sbjct: 230 KFANNPSQKS--------SQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSR 281
Query: 249 FAPLTAD---LLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+T D L LP + G+GWCIFVYNLAP+ ++NVLWQ+FGPFGAV NVKV+R
Sbjct: 282 FSPMTIDGVTSLAGINLPAHA--GTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIR 339
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 340 DFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 385
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + R
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRV 206
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 207 EAEEAIKGLNGQK 219
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
P+ + NL V+ LP++MTQE+L++LF G I + +++ DK+ +
Sbjct: 60 PNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ------------ 107
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNG 191
S G GFV + + +AE A+ LNG
Sbjct: 108 ---SLGYGFVNYMEPKDAEKAINTLNG 131
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 250 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 238 RLDNLLNMAYGVKRFSPMTIDGMTS 262
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 239/335 (71%), Gaps = 26/335 (7%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +
Sbjct: 60 SNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 119
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG I
Sbjct: 120 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 179
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+E
Sbjct: 180 ITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATE 224
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-KFAPLTADLL 257
PITVKFAN+P+ + + + + R + PL A RF +F+P+T D +
Sbjct: 225 PITVKFANNPSQKVN--------HTILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGM 276
Query: 258 NN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
+ + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFG
Sbjct: 277 TSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFG 336
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 337 FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 371
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 241/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 71 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 130
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 131 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 190
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 191 TSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 235
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 236 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 287
Query: 248 -KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 288 KRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 347
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 348 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 393
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 156 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 215
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 216 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 275
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 276 RLDNLLNMAYGVKRFSPMTIDGMTS 300
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 47 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 106
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 107 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 166
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 167 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 211
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 212 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 263
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 264 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 323
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 324 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 369
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 132 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 191
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 192 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 251
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 252 RLDNLLNMAYGVKRFSPMTIDGMTS 276
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/343 (55%), Positives = 240/343 (69%), Gaps = 38/343 (11%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSR
Sbjct: 96 AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 155
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EPITV
Sbjct: 156 ILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------KF 249
KFAN+P+ + QA + + + R + PL A RF +F
Sbjct: 201 KFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRF 252
Query: 250 APLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD
Sbjct: 253 SPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFN 312
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 313 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 238 RLDNLLNMAYGVKRFSPMTIDGMTS 262
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 250 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 238 RLDNLLNMAYGVKRFSPMTIDGMTS 262
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 --KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 41 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 100
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 101 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 160
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 161 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 205
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 206 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 257
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 258 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 317
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 318 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 363
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 126 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 185
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 186 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 245
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 246 RLDNLLNMAYGVKRFSPMTIDGMTS 270
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 250 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 --KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 239/344 (69%), Gaps = 39/344 (11%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSR
Sbjct: 96 AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 155
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EPITV
Sbjct: 156 ILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF--------------K 248
KFAN+P+ + QA + + + R + PL A RF +
Sbjct: 201 KFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSR 252
Query: 249 FAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP 307
F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD
Sbjct: 253 FSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 312
Query: 308 QTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 313 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 --KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 120
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 121 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 180
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 181 TSRILVD---------------QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 225
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 226 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 277
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 278 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 337
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 338 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 383
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 146 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 205
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 206 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 265
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 266 RLDNLLNMAYGVKRFSPMTIDGMTS 290
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 90 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 149
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 150 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 209
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 210 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 254
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 255 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 306
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 307 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 366
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 367 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 412
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 175 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 234
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 235 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 294
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 295 RLDNLLNMAYGVKRFSPMTIDGMTS 319
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 121
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 122 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 181
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 182 TSRILVD---------------QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 226
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 227 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 278
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 279 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 338
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 339 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 384
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 206
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 207 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 266
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 267 RLDNLLNMAYGVKRFSPMTIDGMTS 291
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/347 (54%), Positives = 241/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 --KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 215
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/333 (55%), Positives = 238/333 (71%), Gaps = 26/333 (7%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 37 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 96
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 97 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 156
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 157 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 201
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNN- 259
TVKFAN+P+ + QA + ++ R + PLHH + RF+F+P+ D ++
Sbjct: 202 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGL 253
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 254 AGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFV 313
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 314 TMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 346
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 68/225 (30%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 121 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 180
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 181 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 240
Query: 116 -----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+V L + L LF P+G + ++
Sbjct: 241 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV-- 298
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 299 -------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 330
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 120
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 121 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 180
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 181 TSRILVD---------------QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 225
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 226 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 277
Query: 248 --KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 278 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 337
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 338 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 384
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 146 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 205
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 206 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 243
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 240/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 101 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 160
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 161 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 220
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 221 TSRILVD---------------QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 265
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 266 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 317
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 318 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 377
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 378 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 186 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 245
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 246 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 305
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 306 RLDNLLNMAYGVKRFSPMTIDGMTS 330
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 121
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 122 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 181
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 182 TSRILVD---------------QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 226
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 227 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 278
Query: 248 --KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 279 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 338
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 339 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 385
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 206
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 207 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 244
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/333 (55%), Positives = 238/333 (71%), Gaps = 26/333 (7%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNN- 259
TVKFAN+P+ + QA + ++ R + PLHH + RF+F+P+ D ++
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGL 242
Query: 260 -SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 243 AGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFV 302
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 303 TMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 335
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 68/225 (30%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 170 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 229
Query: 116 -----------------------------YVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+V L + L LF P+G + ++
Sbjct: 230 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV-- 287
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 288 -------IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 319
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 245/363 (67%), Gaps = 59/363 (16%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 41 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 100
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITS
Sbjct: 101 KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 160
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D++ S+G+GF+RF++ +EAE A++ LNG P GA+EPIT
Sbjct: 161 RILVDQVTGG---------------SRGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPIT 205
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------- 247
VKFAN+P+ + +QA + + + R + PLHH A RF
Sbjct: 206 VKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKR 257
Query: 248 ----------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVL 288
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VL
Sbjct: 258 LMASPLFSLLYLHLSTRFSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVL 315
Query: 289 WQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
WQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFK
Sbjct: 316 WQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 375
Query: 349 THK 351
T+K
Sbjct: 376 TNK 378
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 124 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRV 183
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 184 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALL 221
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 240/347 (69%), Gaps = 39/347 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 121
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 122 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 181
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P A+EP
Sbjct: 182 TSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEP 226
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 227 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 278
Query: 248 --KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 279 KSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 338
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 339 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 385
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 206
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + + I V +A S+ +A L
Sbjct: 207 EAEEAIKGLNGQKPPSATEPITVKFANNPSQKTNQAIL 244
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 239/346 (69%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLI NY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 33 NTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 153 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 197
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------ 247
ITVKFAN+P+ + QA + + + R + PL A RF
Sbjct: 198 ITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 248 -KFAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 250 KRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 310 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/386 (50%), Positives = 249/386 (64%), Gaps = 63/386 (16%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
S+ T ++D + +NLI+NY+PQ MTQEE+ LFS++GE++SCKL+RDK T QSLGYGF
Sbjct: 4 SNSPTLENDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGF 63
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
VNY R EDA +A+ LNGL+LQNK+IKVS+ARPSSE+IK ANLYVSGL K M+Q DLE L
Sbjct: 64 VNYIRQEDAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEAL 123
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F+P+G IITSRIL D V+G ISKG+GFVRF++ EAE A+++LNG
Sbjct: 124 FKPFGQIITSRILSDN---------VTG------ISKGVGFVRFDRKSEAEDAIEKLNGK 168
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA--------AAMRHFGNPLHHS 244
IP G +EPITVKFANSPA A+ + A+A+ A + R P+HH+
Sbjct: 169 IPAGCTEPITVKFANSPAANAQKAQLQIAQAASALMPLALLSSISATSGRRIGAGPIHHT 228
Query: 245 ---ARFKFAPL---------------TADLLNNSML----------------------PP 264
RF++ PL + +L+ +L P
Sbjct: 229 PQAGRFRYTPLAGAPGTTTATTATTSSPELITTQLLQMAAATGTSTSPVQLAALANSTPC 288
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ G+GWCIFVYNL PETED VLWQLFGPFGAV +VK+++D T KCKG+GFV M Y+
Sbjct: 289 ASVVGTGWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYE 348
Query: 325 EAVFAIQSLNGYALGDRLLQVSFKTH 350
+AV AI SLNG LG+R LQVSFK+
Sbjct: 349 DAVTAITSLNGTQLGNRTLQVSFKSQ 374
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/386 (50%), Positives = 249/386 (64%), Gaps = 63/386 (16%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
S+ T ++D + +NLI+NY+PQ MTQEE+ LFS++GE++SCKL+RDK T QSLGYGF
Sbjct: 35 SNSPTLENDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGF 94
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
VNY R EDA +A+ LNGL+LQNK+IKVS+ARPSSE+IK ANLYVSGL K M+Q DLE L
Sbjct: 95 VNYIRQEDAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEAL 154
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F+P+G IITSRIL D V+G ISKG+GFVRF++ EAE A+++LNG
Sbjct: 155 FKPFGQIITSRILSDN---------VTG------ISKGVGFVRFDRKSEAEDAIEKLNGK 199
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA--------AAMRHFGNPLHHS 244
IP G +EPITVKFANSPA A+ + A+A+ A + R P+HH+
Sbjct: 200 IPAGCTEPITVKFANSPAANAQKAQLQIAQAASALMPLALLSSISATSGRRIGAGPIHHT 259
Query: 245 ---ARFKFAPL---------------TADLLNNSML----------------------PP 264
RF++ PL + +L+ +L P
Sbjct: 260 PQAGRFRYTPLAGAPGTTTATTATTSSPELITTQLLQMAAATGTSTSPVQLAALANSTPC 319
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ G+GWCIFVYNL PETED VLWQLFGPFGAV +VK+++D T KCKG+GFV M Y+
Sbjct: 320 ASVVGTGWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYE 379
Query: 325 EAVFAIQSLNGYALGDRLLQVSFKTH 350
+AV AI SLNG LG+R LQVSFK+
Sbjct: 380 DAVTAITSLNGTQLGNRTLQVSFKSQ 405
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 258 NNSMLPPKS--LHGSGWCI---FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
++SMLP S L G + N P+ T++ V LF G + + K+VRD T
Sbjct: 29 SSSMLPSNSPTLENDGEAKATNLIINYLPQNMTQEEV-HALFSTLGEIDSCKLVRDKVTG 87
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ G+GFV ++A A+ SLNG L ++ ++VSF
Sbjct: 88 QSLGYGFVNYIRQEDAYKAVTSLNGLRLQNKTIKVSF 124
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/351 (54%), Positives = 239/351 (68%), Gaps = 47/351 (13%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKD 120
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 121 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 180
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ IS+G+GF+RF++ IEAE A++ LNG P A+EP
Sbjct: 181 TSRILVD---------------QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPSAAEP 225
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLN- 258
ITVKFAN+P+ + QA + + + R + PL A RF+ +LLN
Sbjct: 226 ITVKFANNPSQKTN--------QAILSQLYHSPSRRYPAPLAQQAQRFRL----DNLLNM 273
Query: 259 ----NSMLPPKSLH--------------GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQN 300
S PP ++ G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV N
Sbjct: 274 AYGVKSRFPPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTN 333
Query: 301 VKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 334 VKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 384
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 238/346 (68%), Gaps = 38/346 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ+MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 40 NTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKD 99
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 100 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D+ V+G +S+G+GF+RF++ IEAE A++ LNG P A+EP
Sbjct: 160 TSRILVDQ---------VTG------MSRGVGFIRFDKRIEAEEAIKGLNGQKPPAATEP 204
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN 259
ITVKFAN+P+ + QA + + + R + PL A RF+ L
Sbjct: 205 ITVKFANNPSQKTN--------QAILSQLYHSPNRRYPAPLAQQAQRFRLDNLLNMAYGV 256
Query: 260 SMLPPKSLH--------------GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
PP ++ G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 257 KRFPPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 316
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 317 DFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRI 184
Query: 80 DAERAIIELNGLK--LQNKSIKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 185 EAEEAIKGLNGQKPPAATEPITVKFANNPSQKTNQAIL 222
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/346 (54%), Positives = 240/346 (69%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
V + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 114 VEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDA 173
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 174 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 233
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ +EAE A++ LN P GA+EPI
Sbjct: 234 SRILVD---------------QVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPI 278
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PL A RF
Sbjct: 279 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVK 330
Query: 248 -KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 331 SRFSPMAIDGVTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 390
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 391 DFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 436
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/348 (54%), Positives = 241/348 (69%), Gaps = 40/348 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-AQSLGYGFVNYYRTE 79
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPK 121
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG I
Sbjct: 122 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 181
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+E
Sbjct: 182 ITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATE 226
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFK---------- 248
PITVKFAN+P+ + QA + + + R + PL A RF+
Sbjct: 227 PITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYG 278
Query: 249 ----FAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV 303
F+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV
Sbjct: 279 VKSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKV 338
Query: 304 VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 339 IRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 386
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 148 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 207
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 208 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 245
>gi|47219575|emb|CAG02281.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/356 (53%), Positives = 247/356 (69%), Gaps = 35/356 (9%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 1 MEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDA 60
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 61 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 120
Query: 142 SRILCDKMASENVRSFVSGTPEIPQ----------ISKGIGFVRFNQHIEAEHAMQELNG 191
SRIL D++ ++ + +G P + +S+G+GF+RF++ +EAE A++ LN
Sbjct: 121 SRILVDQVTGGSL-TLSAGAPRAGRWLTVLSAPAGVSRGVGFIRFDRRVEAEEAIKGLNC 179
Query: 192 TIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF--- 247
P GA+EPITVKFAN+P+ + +QA + + + R + PL A RF
Sbjct: 180 QKPPGATEPITVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLAQQAQRFRLD 231
Query: 248 -----------KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPF 295
+F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPF
Sbjct: 232 NLLNMAYGVKSRFSPMAIDGVTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPF 291
Query: 296 GAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 292 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 347
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL----------- 68
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T SL
Sbjct: 85 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSLTLSAGAPRAGR 144
Query: 69 -------------GYGFVNYYRTEDAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA 113
G GF+ + R +AE AI LN K + I V +A S+ +A
Sbjct: 145 WLTVLSAPAGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQA 204
Query: 114 NL 115
L
Sbjct: 205 LL 206
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/357 (54%), Positives = 242/357 (67%), Gaps = 52/357 (14%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-------AQSLGYG 71
QS N +NLIVNY+PQTMT+EE++ LFSSVGEVES KL+RDK QSLGYG
Sbjct: 66 QSSDNNSRTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYG 125
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLEN 131
FVNY+R +DAE+A+ LNGL+LQNK +KVS+ARPSSE IK ANLY+SGLPK +TQE+LE
Sbjct: 126 FVNYHRPQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTITQEELET 185
Query: 132 LFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+FRPYG IITSR+L + KG+GF+RF+Q EAE A+Q LNG
Sbjct: 186 IFRPYGEIITSRVLIQDGNDK---------------PKGVGFIRFDQRKEAERAIQALNG 230
Query: 192 TIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNP--------LHH 243
T P+G ++PITVKF+N+P Q AA + A+ F NP +HH
Sbjct: 231 TTPKGLTDPITVKFSNTPG------------QNAAAKVVQPALPAFLNPQLTRRLGAIHH 278
Query: 244 ---SARFKFAPLTADLLNNSMLPPKSLHG------SGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ ++L+ MLP +G GW IF+YNLAPETE+N LWQLFGP
Sbjct: 279 PINKGLARFSPMGGEVLD-MMLPAAPANGLNVAPSGGWSIFIYNLAPETEENTLWQLFGP 337
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGAVQNVKV++D T +CKG+GFV MTNY+EA+ AI+SLNGY LG R+LQVSFKT+K
Sbjct: 338 FGAVQNVKVIKDAATNQCKGYGFVTMTNYEEAMLAIRSLNGYTLGQRVLQVSFKTNK 394
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 240/348 (68%), Gaps = 40/348 (11%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-AQSLGYGFVNYYRTE 79
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPK 121
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG I
Sbjct: 122 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 181
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+E
Sbjct: 182 ITSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATE 226
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFK---------- 248
PITVKFAN+P+ + QA + + + R + PL A RF+
Sbjct: 227 PITVKFANNPSQKTN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYG 278
Query: 249 ----FAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV 303
F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV
Sbjct: 279 VKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKV 338
Query: 304 VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 339 IRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 386
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 148 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 207
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 208 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 245
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 240/346 (69%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 63 IEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDA 122
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 123 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 182
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ +EAE A++ LN P GA+EPI
Sbjct: 183 SRILVD---------------QVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPI 227
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ + +QA + + + R + PL A RF
Sbjct: 228 TVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVK 279
Query: 248 -KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+R
Sbjct: 280 SRFSPMAIDGVTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIR 339
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 340 DFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 385
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + R
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDRRV 206
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LN K + I V +A S+ +A L
Sbjct: 207 EAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALL 244
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/360 (52%), Positives = 243/360 (67%), Gaps = 56/360 (15%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 166 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF------------- 247
TVKFAN+P+ ++ +QA + + + R + PLHH A RF
Sbjct: 211 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK 262
Query: 248 --------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+F+P+T D + + + +P + G+GWCIFVYNL+P+++++VLWQ
Sbjct: 263 RLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQ 320
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVS +
Sbjct: 321 LFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSMTNY 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALL 227
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/350 (54%), Positives = 244/350 (69%), Gaps = 30/350 (8%)
Query: 6 EMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
+M N + H +V + +NLIVNY+PQ+M+Q+EL+ LFSS+GEVES KLIRDK
Sbjct: 16 DMSNGYEDHMGG-GDEVTDAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAG 74
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
SLGYGFVNY DAERAI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK MT
Sbjct: 75 HSLGYGFVNYLTPSDAERAINTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKTMT 134
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q+D+E++F YG II SR+L D+ + +S+G+ F+RF++ EAE A
Sbjct: 135 QKDVEDMFARYGRIINSRVLVDQASG---------------LSRGVAFIRFDKRAEAEDA 179
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA 245
+++LNG P G++EPITVKFA SP +AK N Q + + R FG P+HH A
Sbjct: 180 IKDLNGQKPPGSAEPITVKFAASP-NQAK------NTQLISQLYHNQG-RRFGGPVHHQA 231
Query: 246 -RFKFAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
RF+F+P++ D + S + SL G SGWCIF+YNL + ++ +LWQ+FGPFGAV NV
Sbjct: 232 QRFRFSPMSVDHM--SGMSGVSLPGNATSGWCIFIYNLGQDADEGILWQMFGPFGAVTNV 289
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KV+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 290 KVIRDFNTNKCKGFGFVTMTNYEEAAMAIGSLNGYRLGDKILQVSFKTSK 339
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/352 (53%), Positives = 241/352 (68%), Gaps = 24/352 (6%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
NT ++ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSL
Sbjct: 48 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 107
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
GYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++
Sbjct: 108 GYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKE 167
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
LE LF YG IITSRIL D ++ +S+G+GF+RF++ IEAE A++
Sbjct: 168 LEQLFSQYGRIITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKG 212
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH---FAAAMRHFG-----NP 240
LNG P GA+EPITVKFAN+P+ + + Q+ R+ A + F N
Sbjct: 213 LNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNM 272
Query: 241 LHHSARFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
+ + +F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV
Sbjct: 273 AYGGIKSRFSPMAIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVT 332
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 333 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 384
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/352 (53%), Positives = 241/352 (68%), Gaps = 24/352 (6%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
NT ++ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSL
Sbjct: 19 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 78
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
GYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++
Sbjct: 79 GYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKE 138
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
LE LF YG IITSRIL D ++ +S+G+GF+RF++ IEAE A++
Sbjct: 139 LEQLFSQYGRIITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKG 183
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH---FAAAMRHFG-----NP 240
LNG P GA+EPITVKFAN+P+ + + Q+ R+ A + F N
Sbjct: 184 LNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNM 243
Query: 241 LHHSARFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
+ + +F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV
Sbjct: 244 AYGGIKSRFSPMAIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVT 303
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 304 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
>gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - human
gi|2340828|dbj|BAA21838.1| PLE21 protein [Homo sapiens]
Length = 350
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/347 (54%), Positives = 235/347 (67%), Gaps = 42/347 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 25 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 84
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 85 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 144
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA EPI
Sbjct: 145 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAREPI 189
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + ++ R + PLHH + RF
Sbjct: 190 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYAVK 241
Query: 248 KFAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+ D + S L L G GWCIFVYNL+PE + +VLWQLFGPFGAV NVKV+
Sbjct: 242 RFSPIAIDGM--SGLAGVGLSGGAAGGWCIFVYNLSPEPDQSVLWQLFGPFGAVTNVKVI 299
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGF+ MTNYDEA AI SLNGY LG R+LQVSFKT K
Sbjct: 300 RDFTTNKCKGFGFMTMTNYDEAAMAIASLNGYRLGQRVLQVSFKTSK 346
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 109 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 168
Query: 80 DAERAIIELNGLK--LQNKSIKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 169 EAEEAIKGLNGQKPLGAREPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 228
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL Y S I D M+
Sbjct: 229 RLDNLLNMAYAVKRFSPIAIDGMSG 253
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 235/345 (68%), Gaps = 39/345 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 154 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + + ++ R + PLHH + RF+ L
Sbjct: 199 VKFANNPSQKT--------GQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKR 250
Query: 262 LPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD
Sbjct: 251 FSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 310
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 311 FTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H TQ
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQSSARRYAGPLHHQTQRF 236
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 237 RLDNLLNMAYGVKRFSPIAIDGMS 260
>gi|426387255|ref|XP_004060089.1| PREDICTED: ELAV-like protein 3 isoform 3 [Gorilla gorilla gorilla]
Length = 346
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 238/340 (70%), Gaps = 33/340 (9%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------KFAPLT 253
TVKFAN+P+ + QA + ++ R + PLHH + RF +F+P+
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRPLSLIARFSPIA 242
Query: 254 ADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYK 311
D ++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T K
Sbjct: 243 IDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNK 302
Query: 312 CKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
CKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 303 CKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 342
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 17/143 (11%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQED 128
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 170 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQR- 228
Query: 129 LENLFRPYGTIIT-SRILCDKMA 150
FRP I S I D M+
Sbjct: 229 ----FRPLSLIARFSPIAIDGMS 247
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 235/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 82 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 141
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 142 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 201
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 202 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 246
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + + ++ R + PLHH + RF+ L
Sbjct: 247 TVKFANNPSQK--------TGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 298
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 299 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 358
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 359 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 404
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 166 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 225
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H TQ
Sbjct: 226 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQSSARRYAGPLHHQTQRF 285
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M+
Sbjct: 286 RLDNLLNMAYGVKRFSPIAIDGMSG 310
>gi|27696830|gb|AAH43735.1| ElrD protein [Xenopus laevis]
Length = 395
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 246/376 (65%), Gaps = 71/376 (18%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA---------------- 65
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEENFKDLATGTKW 100
Query: 66 -------------QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR 112
QSLGYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+
Sbjct: 101 KPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRD 160
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK MTQ++LE LF YG IITSRIL D++ +S+G+G
Sbjct: 161 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG---------------VSRGVG 205
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
F+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ + +QA + + +
Sbjct: 206 FIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKT--------SQALLSQLYQS 257
Query: 233 AMRHFGNPLHHSA-RFK-------------FAPLTADLLNNSM---LPPKSLHGSGWCIF 275
R + PLHH A RF+ F+P+T D + + + +P + G+GWCIF
Sbjct: 258 PNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIF 315
Query: 276 VYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
VYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNG
Sbjct: 316 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 375
Query: 336 YALGDRLLQVSFKTHK 351
Y LGDR+LQVSFKT+K
Sbjct: 376 YRLGDRVLQVSFKTNK 391
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 154 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 213
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 214 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 273
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 274 RLDNLLNMAYGVKRFSPITIDGMTS 298
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 235/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 81 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 140
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 141 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 200
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 201 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 245
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + + ++ R + PLHH + RF+ L
Sbjct: 246 TVKFANNPSQK--------TGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 297
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 298 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 357
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 358 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 403
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 165 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 224
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H TQ
Sbjct: 225 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQSSARRYAGPLHHQTQRF 284
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M+
Sbjct: 285 RLDNLLNMAYGVKRFSPIAIDGMSG 309
>gi|147901954|ref|NP_001080909.1| ELAV-like protein 4 [Xenopus laevis]
gi|82240321|sp|Q7SZT7.1|ELAV4_XENLA RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|33585950|gb|AAH56021.1| ElrD protein [Xenopus laevis]
Length = 400
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 246/376 (65%), Gaps = 71/376 (18%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA---------------- 65
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEENFKDLATGTKW 105
Query: 66 -------------QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR 112
QSLGYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+
Sbjct: 106 KPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRD 165
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK MTQ++LE LF YG IITSRIL D++ +S+G+G
Sbjct: 166 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG---------------VSRGVG 210
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
F+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ + +QA + + +
Sbjct: 211 FIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKT--------SQALLSQLYQS 262
Query: 233 AMRHFGNPLHHSA-RFK-------------FAPLTADLLNNSM---LPPKSLHGSGWCIF 275
R + PLHH A RF+ F+P+T D + + + +P + G+GWCIF
Sbjct: 263 PNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIF 320
Query: 276 VYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
VYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNG
Sbjct: 321 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 380
Query: 336 YALGDRLLQVSFKTHK 351
Y LGDR+LQVSFKT+K
Sbjct: 381 YRLGDRVLQVSFKTNK 396
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 159 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 218
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 219 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 278
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 279 RLDNLLNMAYGVKRFSPITIDGMTS 303
>gi|156717966|ref|NP_001096525.1| ELAV-like protein 4 [Xenopus (Silurana) tropicalis]
gi|288561889|sp|A4QNI8.1|ELAV4_XENTR RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|138519953|gb|AAI35737.1| LOC100125165 protein [Xenopus (Silurana) tropicalis]
Length = 400
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 246/376 (65%), Gaps = 71/376 (18%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA---------------- 65
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEEHFKDLATGTKW 105
Query: 66 -------------QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR 112
QSLGYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+
Sbjct: 106 KPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRD 165
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK MTQ++LE LF YG IITSRIL D++ +S+G+G
Sbjct: 166 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG---------------VSRGVG 210
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
F+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ + +QA + + +
Sbjct: 211 FIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKT--------SQALLSQLYQS 262
Query: 233 AMRHFGNPLHHSA-RFK-------------FAPLTADLLNNSM---LPPKSLHGSGWCIF 275
R + PLHH A RF+ F+P+T D + + + +P + G+GWCIF
Sbjct: 263 PNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIF 320
Query: 276 VYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
VYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNG
Sbjct: 321 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 380
Query: 336 YALGDRLLQVSFKTHK 351
Y LGDR+LQVSFKT+K
Sbjct: 381 YRLGDRVLQVSFKTNK 396
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 159 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 218
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 219 EAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 278
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 279 RLDNLLNMAYGVKRFSPITIDGMTS 303
>gi|311248628|ref|XP_003123218.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Sus
scrofa]
Length = 359
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 234/345 (67%), Gaps = 39/345 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 154 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 199 VKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKR 250
Query: 262 LPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD
Sbjct: 251 FSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 310
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 311 FTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 236
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 237 RLDNLLNMAYGVKRFSPIAIDGMS 260
>gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2 [Homo sapiens]
gi|119604627|gb|EAW84221.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Homo sapiens]
gi|261861050|dbj|BAI47047.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3
[synthetic construct]
gi|380783931|gb|AFE63841.1| ELAV-like protein 3 isoform 2 [Macaca mulatta]
Length = 360
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 234/345 (67%), Gaps = 39/345 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 35 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 94
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 95 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 155 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 200 VKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKR 251
Query: 262 LPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD
Sbjct: 252 FSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 311
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 312 FTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 356
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 238 RLDNLLNMAYGVKRFSPIAIDGMS 261
>gi|395850849|ref|XP_003797986.1| PREDICTED: ELAV-like protein 3 isoform 2 [Otolemur garnettii]
gi|402904299|ref|XP_003914984.1| PREDICTED: ELAV-like protein 3 isoform 2 [Papio anubis]
Length = 359
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 234/345 (67%), Gaps = 39/345 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 34 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 94 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 154 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 199 VKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKR 250
Query: 262 LPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD
Sbjct: 251 FSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 310
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 311 FTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 236
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 237 RLDNLLNMAYGVKRFSPIAIDGMS 260
>gi|344283287|ref|XP_003413403.1| PREDICTED: ELAV-like protein 3 [Loxodonta africana]
Length = 360
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 234/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 94 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 199 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 250
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 251 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 310
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 311 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 356
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 238 RLDNLLNMAYGVKRFSPIAIDGMS 261
>gi|410950486|ref|XP_003981936.1| PREDICTED: ELAV-like protein 3 isoform 1 [Felis catus]
gi|431918945|gb|ELK17812.1| ELAV-like protein 3 [Pteropus alecto]
Length = 352
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 234/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 242
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 243 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 302
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 303 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 348
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 170 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 229
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 230 RLDNLLNMAYGVKRFSPIAIDGMS 253
>gi|241608253|ref|XP_002406562.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502676|gb|EEC12170.1| conserved hypothetical protein [Ixodes scapularis]
Length = 270
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/290 (63%), Positives = 222/290 (76%), Gaps = 27/290 (9%)
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
QSLGYGFVNY R EDAE+AI LNGL+LQNK+IKVSYARPSSEAIK ANLYVSGLPK MT
Sbjct: 1 QSLGYGFVNYVRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKSMT 60
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q+DLE LF PYG IITSRILCD I +SKG+GFVRF+Q +EAE A
Sbjct: 61 QQDLEGLFSPYGRIITSRILCD---------------NITGLSKGVGFVRFDQRVEAERA 105
Query: 186 MQELNGTIPE--GASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
++ L+ ++P GA+EPITVKFAN+P+ AKA+A + + + R F P+HH
Sbjct: 106 IKHLHNSVPADGGATEPITVKFANNPSNNAKAIAP--------LAAYLSPQRRFPGPIHH 157
Query: 244 SA-RF-KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
A RF +++PL DLL N +L +++GSGWCIFVYNLAP+TE+N+LWQLFGPFGAVQ+V
Sbjct: 158 PANRFSRYSPLAGDLLANPLLAGSAMNGSGWCIFVYNLAPDTEENLLWQLFGPFGAVQSV 217
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KV+RD QT KCKGFGFV MTNYDEA+ AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 218 KVIRDLQTNKCKGFGFVTMTNYDEALVAIQSLNGYTLGNRVLQVSFKTNK 267
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL V+ +P++MTQ++L+ LFS G + + +++ D T S G GFV + + +AERA
Sbjct: 46 KGANLYVSGLPKSMTQQDLEGLFSPYGRIITSRILCDNITGLSKGVGFVRFDQRVEAERA 105
Query: 85 IIEL 88
I L
Sbjct: 106 IKHL 109
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P T + L LF G V+S K+IRD T + G+GFV ++A AI L
Sbjct: 191 FVYNLAPDT-EENLLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEALVAIQSL 249
Query: 89 NGLKLQNKSIKVSY 102
NG L N+ ++VS+
Sbjct: 250 NGYTLGNRVLQVSF 263
>gi|403302354|ref|XP_003941825.1| PREDICTED: ELAV-like protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 352
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 234/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 242
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 243 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 302
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 303 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 348
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 170 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 229
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 230 RLDNLLNMAYGVKRFSPIAIDGMS 253
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 236/346 (68%), Gaps = 42/346 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T + LGYGFVNY DA+
Sbjct: 35 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDAD 94
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 95 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 155 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------------K 248
VKFAN+P+ + QA + ++ R + PLHH + RF +
Sbjct: 200 VKFANNPSQK--------TGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKR 251
Query: 249 FAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
F+P+ D + S L L G GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 252 FSPIAIDGM--SGLAGVGLSGGAAGGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY L +R+LQVSFKT K
Sbjct: 310 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLAERVLQVSFKTSK 355
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M+
Sbjct: 238 RLDNLLNMAYGVKRFSPIAIDGMSG 262
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/353 (54%), Positives = 244/353 (69%), Gaps = 32/353 (9%)
Query: 5 EEMYNTTQSHRSTYQSDVN-EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT 63
+E+Y+ + + D + +NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK
Sbjct: 12 KEVYDMSNGYEDHMGGDEGKDAKTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKV 71
Query: 64 TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKH 123
SLGYGFVNY DAERAI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK+
Sbjct: 72 AGHSLGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKN 131
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
MTQ+D+E++F YG II SR+L D+ GT S+G+ F+RF++ EAE
Sbjct: 132 MTQKDVEDMFSRYGRIINSRVLVDQ-----------GTGS----SRGVAFIRFDKRAEAE 176
Query: 184 HAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
A++ LNG P GASEPITVKFA +P + K N Q + + + R FG PLHH
Sbjct: 177 EAVKNLNGQKPPGASEPITVKFAANP-NQVK------NTQLLSQLYHNQS-RRFGGPLHH 228
Query: 244 SA-RFKFAPLTADLLNNSM----LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAV 298
A RF+F+P+ D + SM +P S SGWCIF+YNL + ++++LWQ+FGPFGAV
Sbjct: 229 QAQRFRFSPMGVDHM-GSMGGVSVPGNST--SGWCIFIYNLGQDADESILWQMFGPFGAV 285
Query: 299 QNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 286 TNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSK 338
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 233/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 93 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 152
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D+ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 153 SRILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 197
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 198 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 249
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 250 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 309
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 310 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 177 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 236
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 237 RLDNLLNMAYGVKRFSPIAIDGMS 260
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 235/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 185 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 244
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 245 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 304
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 305 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 349
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + + ++ R + PLHH + RF+ L
Sbjct: 350 TVKFANNPSQK--------TGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 401
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 402 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 461
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 462 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 507
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 269 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 328
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H TQ
Sbjct: 329 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQSSARRYAGPLHHQTQRF 388
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 389 RLDNLLNMAYGVKRFSPIAIDGMS 412
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 233/346 (67%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D+ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 242
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 243 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 302
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 303 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 348
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 170 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 229
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 230 RLDNLLNMAYGVKRFSPIAIDGMS 253
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 232/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GE+ES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F P+G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSPFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEASMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G I +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 195/389 (50%), Positives = 247/389 (63%), Gaps = 66/389 (16%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
S+ +SD + +NLI+NY+PQ MTQEE+ LFS++GE++SCKL+RDK T QSLGYGF
Sbjct: 35 SNSPILESDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGF 94
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
VNY R EDA +A+ LNGL+LQNK+IKVS+ARPSSE+IK ANLYVSGL K M+Q DLE L
Sbjct: 95 VNYVRQEDAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEAL 154
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F+P+G IITSRIL D V+G ISKG+GFVRF++ EAE A+ +LNG
Sbjct: 155 FKPFGQIITSRILSDN---------VTG------ISKGVGFVRFDRKSEAEDAIDKLNGK 199
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA--------AAMRHFGNPLHHS 244
IP G +EPITVKFANSPA A+ + A+A+ A + R P+HH+
Sbjct: 200 IPAGCTEPITVKFANSPAANAQKAQLQIAQAASALMPLALLSSISATSGRRIGAGPIHHT 259
Query: 245 ---ARFKFAPL---------------TADLLNNSML----------------------PP 264
RF++ PL + +L+ +L P
Sbjct: 260 PQAGRFRYTPLAGAPGTTTATTATTSSPELITTQLLQMAAATGTSTSPVQLAALANSTPC 319
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK---VVRDPQTYKCKGFGFVCMT 321
S+ G+GWCIFVYNL PETED VLWQLFGPFGAV +VK +++D T KCKG+GFV M
Sbjct: 320 GSVVGTGWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKAGIIIKDFSTGKCKGYGFVTMG 379
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
Y++AV AI SLNG LG+R LQVSFK+
Sbjct: 380 QYEDAVTAITSLNGTQLGNRTLQVSFKSQ 408
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 258 NNSMLPPKS--LHGSGWCI---FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
++SMLP S L G + N P+ T++ V LF G + + K+VRD T
Sbjct: 29 SSSMLPSNSPILESDGEAKATNLIINYLPQNMTQEEV-HALFSTLGEIDSCKLVRDKVTG 87
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ G+GFV ++A A+ SLNG L ++ ++VSF
Sbjct: 88 QSLGYGFVNYVRQEDAYKAVTSLNGLRLQNKTIKVSF 124
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 238/346 (68%), Gaps = 39/346 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 321 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 380
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 381 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 440
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 441 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 485
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + ++ R + PLHH + RF
Sbjct: 486 TVKFANNPSQK--------TGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 537
Query: 248 KFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
+F+P+ D ++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 538 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 597
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 598 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 643
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 405 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 464
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 465 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 524
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 525 RLDNLLNMAYGVKRFSPIAIDGMS 548
>gi|410907065|ref|XP_003967012.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 2-like, partial
[Takifugu rubripes]
Length = 321
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 236/340 (69%), Gaps = 39/340 (11%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
NLIVNY+PQ M QEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+AI
Sbjct: 1 NLIVNYLPQNMXQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINT 60
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSRIL D
Sbjct: 61 LNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVD 120
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN 207
++ +S+G+GF+RF++ +EAE A++ LN P GA+EPITVKFAN
Sbjct: 121 ---------------QVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFAN 165
Query: 208 SPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF--------------KFAPL 252
+P+ + +QA + + + R + PL A RF +F+P+
Sbjct: 166 NPSQKT--------SQALLSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPM 217
Query: 253 TADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYK 311
D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T K
Sbjct: 218 AIDGVTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNK 277
Query: 312 CKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
CKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 278 CKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 317
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + R
Sbjct: 79 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDRRV 138
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LN K + I V +A S+ +A L
Sbjct: 139 EAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALL 176
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 230/328 (70%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVS+ARPSSE+IK ANLY+SGLP+ MTQ+D+E++F P+G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQATG---------------LSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRHFA-AAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + R FG P+HH A RF+F+P+ D +++ S +
Sbjct: 185 ANP---------NQNKNVALLSQICHSPARRFGGPVHHQAQRFRFSPMGVDHMSSISSVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
S SGWCIFVYNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VASSATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD+ LQVSFKT K
Sbjct: 296 EEAAMAIASLNGYRLGDKTLQVSFKTSK 323
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 67/219 (30%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +F G + + +++ D+ T S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLKL----------------QNKSI------------------------------ 98
I NG K QNK++
Sbjct: 164 IASFNGHKPPGSSEPITVKFAANPNQNKNVALLSQICHSPARRFGGPVHHQAQRFRFSPM 223
Query: 99 ------KVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
+S +S A ++V L + + L +F P+G + +++ D ++
Sbjct: 224 GVDHMSSISSVNVASSATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNK 283
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
KG GFV + EA A+ LNG
Sbjct: 284 ---------------CKGFGFVTMTNYEEAAMAIASLNG 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
+ I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL------------- 61
Query: 168 SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V FA
Sbjct: 62 --GYGFVNYLNAKDAERAINTLNGLRLQ--SKTIKVSFA 96
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ V + Q + L +F G V + K+IRD T + G+GFV E+A AI L
Sbjct: 246 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 89 NGLKLQNKSIKVSYARPSS 107
NG +L +K+++VS+ S
Sbjct: 306 NGYRLGDKTLQVSFKTSKS 324
>gi|148235423|ref|NP_001081035.1| ELAV-like protein 2 [Xenopus laevis]
gi|288561905|sp|Q91903.2|ELAV2_XENLA RecName: Full=ELAV-like protein 2; AltName: Full=Elav like-1;
Short=Xel-1; AltName: Full=Protein ElrB; AltName:
Full=p45
gi|608539|gb|AAA96943.1| ribonucleoprotein [Xenopus laevis]
Length = 389
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 188/353 (53%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-AQS 67
NT ++ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QS
Sbjct: 48 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQS 107
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ+
Sbjct: 108 LGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQK 167
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
+LE LF YG IITSRIL D ++ +S+G+GF+RF++ IEAE A++
Sbjct: 168 ELEQLFSQYGRIITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIK 212
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH---FAAAMRHFG-----N 239
LNG P GA+EPITVKFAN+P+ + + Q+ R+ A + F N
Sbjct: 213 GLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLN 272
Query: 240 PLHHSARFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAV 298
+ + +F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV
Sbjct: 273 MAYGGIKSRFSPMAIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAV 332
Query: 299 QNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 333 TNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 385
>gi|357619997|gb|EHJ72347.1| hypothetical protein KGM_14614 [Danaus plexippus]
Length = 320
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/327 (58%), Positives = 238/327 (72%), Gaps = 23/327 (7%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTT--------AQSLGYGFVNYYRTEDAERAIIELN 89
M+QEE++ LFSSVGEVESCKLIRDK T QSLGY FVNY++ EDAE+A+ LN
Sbjct: 1 MSQEEIRSLFSSVGEVESCKLIRDKVTVFPDHILNGQSLGYAFVNYHKPEDAEKAVNTLN 60
Query: 90 GLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKM 149
GL+LQNK IKVSYARPSS+AIK ANLYVSGLPKHMTQ+DLE LF P+GTII+SRIL + M
Sbjct: 61 GLRLQNKIIKVSYARPSSDAIKGANLYVSGLPKHMTQQDLEKLFSPFGTIISSRILHENM 120
Query: 150 ASENVRSFVSGTPE---IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
NV + G E I S+G+ F+R++Q IEAE+A++ELNGTIP G + PITVK A
Sbjct: 121 ---NVGHLLQGGMEEQGIQGPSRGVAFIRYDQRIEAENAIRELNGTIPPGGTGPITVKCA 177
Query: 207 NSPAGRAKALA--ANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
N+P+ + KALA A A R A + + +++PL L+ +
Sbjct: 178 NNPSNQNKALAPLATYLAPPTVRRFLGPAGKAL--LAINKGLQRYSPLADPLVQGN---- 231
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+L GSGWCIFVYN+ +TE++VLWQLFGPFGAVQ+VK++RDP T KCKG+GFV MTNYD
Sbjct: 232 -ALGGSGWCIFVYNIGADTEESVLWQLFGPFGAVQSVKIIRDPTTNKCKGYGFVTMTNYD 290
Query: 325 EAVFAIQSLNGYALGDRLLQVSFKTHK 351
EAV AIQSLNGY+L ++LQVSFKT+K
Sbjct: 291 EAVVAIQSLNGYSLNGQVLQVSFKTNK 317
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L LF G V+S K+IRD TT + GYGFV ++A AI LNG L + ++VS+
Sbjct: 254 LWQLFGPFGAVQSVKIIRDPTTNKCKGYGFVTMTNYDEAVVAIQSLNGYSLNGQVLQVSF 313
Query: 103 ARPSSEA 109
S++
Sbjct: 314 KTNKSKS 320
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 83/235 (35%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL---------------G 69
+ +NL V+ +P+ MTQ++L+ LFS G + S +++ + L G
Sbjct: 82 KGANLYVSGLPKHMTQQDLEKLFSPFGTIISSRILHENMNVGHLLQGGMEEQGIQGPSRG 141
Query: 70 YGFVNYYRTEDAERAIIELNGL-----------------KLQNKSIK-----------VS 101
F+ Y + +AE AI ELNG QNK++
Sbjct: 142 VAFIRYDQRIEAENAIRELNGTIPPGGTGPITVKCANNPSNQNKALAPLATYLAPPTVRR 201
Query: 102 YARPSSEAIKRAN-------------------------LYVSGLPKHMTQEDLENLFRPY 136
+ P+ +A+ N ++V + + L LF P+
Sbjct: 202 FLGPAGKALLAINKGLQRYSPLADPLVQGNALGGSGWCIFVYNIGADTEESVLWQLFGPF 261
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
G + + +I+ D ++ KG GFV + EA A+Q LNG
Sbjct: 262 GAVQSVKIIRDPTTNK---------------CKGYGFVTMTNYDEAVVAIQSLNG 301
>gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1 [Homo sapiens]
gi|21264436|sp|Q14576.3|ELAV3_HUMAN RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC; AltName: Full=Paraneoplastic cerebellar
degeneration-associated antigen; AltName:
Full=Paraneoplastic limbic encephalitis antigen 21
gi|119604626|gb|EAW84220.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Homo sapiens]
gi|380783929|gb|AFE63840.1| ELAV-like protein 3 isoform 1 [Macaca mulatta]
Length = 367
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/352 (52%), Positives = 238/352 (67%), Gaps = 46/352 (13%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 35 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 94
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 95 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 155 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------------- 247
VKFAN+P+ + QA + ++ R + PLHH + RF
Sbjct: 200 VKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKS 251
Query: 248 ------KFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
+F+P+ D ++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV
Sbjct: 252 PLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVT 311
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 312 NVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 178 EAEEAIKGLNGQK 190
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/343 (54%), Positives = 235/343 (68%), Gaps = 31/343 (9%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T SLGYGFVNY +D
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGPSLGYGFVNYVDPKD 120
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
A++A+ LNG +LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ +LE LF YG II
Sbjct: 121 AKKAVNTLNGFRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQTELEQLFSQYGHII 180
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 181 TSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 225
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRH------FGNPLHHSARFK-FAPLT 253
+TVKFAN+P+ + QA R + A + N L+ + K F P+T
Sbjct: 226 VTVKFANNPSQKTN--------QATPNRRYPAPLAQQAQRFRLDNLLNIAYGVKRFPPMT 277
Query: 254 ADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
D + S H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KC
Sbjct: 278 IDGMTALAGINISGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 337
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPLPP 355
KGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K P
Sbjct: 338 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKP 380
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 146 SSASIRDANLYVSGLPKTMTQTELEQLFSQYGHIITSRILVDQVTGVSRGVGFIRFDKRI 205
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRAN---LYVSGLPKHMTQEDLENLF 133
+AE AI LNG K + + V +A S+ +A Y + L + + L+NL
Sbjct: 206 EAEEAIKGLNGQKPPGATEPVTVKFANNPSQKTNQATPNRRYPAPLAQQAQRFRLDNLL 264
>gi|148236291|ref|NP_001081613.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus laevis]
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]
Length = 389
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/353 (52%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-AQS 67
NT ++ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QS
Sbjct: 48 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQS 107
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY +DAE+AI +NGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ+
Sbjct: 108 LGYGFVNYIDPKDAEKAINTVNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQK 167
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
+LE LF YG IITSRIL D ++ +S+G+GF+RF++ IEAE A++
Sbjct: 168 ELEQLFSQYGRIITSRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIK 212
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH---FAAAMRHFG-----N 239
LNG P GA+EPITVKFAN+P+ + + Q+ R+ A + F N
Sbjct: 213 GLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLN 272
Query: 240 PLHHSARFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAV 298
+ + +F+P+ D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV
Sbjct: 273 MAYGGIKSRFSPMAIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAV 332
Query: 299 QNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT K
Sbjct: 333 TNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 385
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 232/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP++MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+ MTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 228/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 68 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 127
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 128 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 187
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 188 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 232
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D + S +
Sbjct: 233 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMTGLSGVN 283
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 284 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 343
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 344 EEAAMAIASLNGYRLGDKILQVSFKTNK 371
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 152 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 211
Query: 85 IIELNGLK 92
I NG K
Sbjct: 212 ITSFNGHK 219
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 58 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL-------- 109
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 110 -------GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 144
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 229/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G + +++++ DK+A ++
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL-------- 61
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 -------GYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 96
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 229/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G + +++++ DK+A ++
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL-------- 61
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 -------GYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 96
>gi|440910150|gb|ELR59976.1| ELAV-like protein 3, partial [Bos grunniens mutus]
Length = 373
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 239/360 (66%), Gaps = 53/360 (14%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 93 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 152
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 153 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 197
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKF----------- 249
TVKFAN+P+ + QA + + ++ R + PLHH + RF+
Sbjct: 198 TVKFANNPSQKT--------GQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 249
Query: 250 ---APLTADLLNNSMLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQL 291
P ++ L + P ++ G SG WCIFVYNL+PE +++VLWQL
Sbjct: 250 SPRDPQSSPLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQL 309
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 310 FGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 369
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 177 EAEEAIKGLNGQK 189
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 230/328 (70%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 30 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 89
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 90 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 149
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 150 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 194
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 195 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVN 245
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
S SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 246 VPSNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 305
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 306 EEAAMAIASLNGYRLGDKILQVSFKTNK 333
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 114 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 173
Query: 85 IIELNGLK 92
I NG K
Sbjct: 174 ITSFNGHK 181
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 20 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 69
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 70 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 106
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 238/350 (68%), Gaps = 53/350 (15%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-------AQSLGYGFVNYYRTE 79
+NLIVNY+PQTMT+EE++ LFSSVGEVES KL+RDK QSLGYGFVN++R++
Sbjct: 34 TNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQ 93
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+A+ LNGL+LQNK +KVS+ARPSSE IK ANLY+SGLPK +TQE+LE +FRPYG I
Sbjct: 94 DAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTITQEELETIFRPYGEI 153
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSR+L + + KG+GF+RF+Q EAE A+ LNGT P+G ++
Sbjct: 154 ITSRVLVQEGNDK---------------PKGVGFIRFDQRKEAERAIAALNGTTPKGLTD 198
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNP--------LHH---SARFK 248
PITVKF+N+P Q A + A+ F NP +HH +
Sbjct: 199 PITVKFSNTPG------------QNTAAKIVQPALPTFLNPQLTRRLGAIHHPINKGLAR 246
Query: 249 FAPLTADLLNNSMLPPKSLHG-------SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
F+P+ ++L+ MLP G GW IF+YNLAPETE+N LWQLFGPFGAVQNV
Sbjct: 247 FSPMGGEVLD-MMLPTAPTTGIGAIAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNV 305
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KV++D T +CKG+GFV MTNY+EA+ AI+SLNGY LG R+LQVSFKT+K
Sbjct: 306 KVIKDSATNQCKGYGFVTMTNYEEAMLAIRSLNGYTLGQRVLQVSFKTNK 355
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 44/66 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL ++ +P+T+TQEEL+ +F GE+ + +++ + + G GF+ + + ++AERA
Sbjct: 125 KGANLYISGLPKTITQEELETIFRPYGEIITSRVLVQEGNDKPKGVGFIRFDQRKEAERA 184
Query: 85 IIELNG 90
I LNG
Sbjct: 185 IAALNG 190
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+ + + L+ QN + + A S R NL V+ LP+ MT+E++ +LF G + +
Sbjct: 4 KVLAAVQDLQKQNGESQNTAAAASGSETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESV 63
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+++ DK NV G P+ S G GFV F++ +AE A+ LNG
Sbjct: 64 KLVRDK----NV--IYPGQPK--GQSLGYGFVNFHRSQDAEQAVNVLNG 104
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 139 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 198
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 199 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 258
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 259 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 303
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 304 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 352
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 353 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 412
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 413 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 442
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 223 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 282
Query: 85 IIELNGLKLQNKS--IKVSYA 103
I NG K S I V +A
Sbjct: 283 ITSFNGHKPPGSSEPITVKFA 303
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 136 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL--------------- 180
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 181 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 215
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/353 (52%), Positives = 237/353 (67%), Gaps = 46/353 (13%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 94 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D+ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + ++ R + PLHH + RF
Sbjct: 199 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 250
Query: 248 -------KFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAV 298
+F+P+ D ++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV
Sbjct: 251 SPLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAV 310
Query: 299 QNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 311 TNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 178 EAEEAIKGLNGQK 190
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A S
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SL 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 23 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 82
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 83 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 142
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 143 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 187
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 188 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 236
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 237 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 296
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 297 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 326
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 107 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 166
Query: 85 IIELNGLK 92
I NG K
Sbjct: 167 ITSFNGHK 174
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 13 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 62
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 63 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 99
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 229/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGIN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A S
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SL 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 47 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 106
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 107 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 166
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 167 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 211
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 212 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 260
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 261 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 320
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 321 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 350
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 131 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 190
Query: 85 IIELNGLK 92
I NG K
Sbjct: 191 ITSFNGHK 198
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 44 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL--------------- 88
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 89 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 123
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 230/330 (69%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRHFA-AAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P++MTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITNFNGHK 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 239/358 (66%), Gaps = 51/358 (14%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 31 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 90
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 91 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 150
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 151 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 195
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFA---------- 250
TVKFAN+P+ + QA + ++ R + PLHH + RF+ +
Sbjct: 196 TVKFANNPSQK--------TGQALLTHLYQSSARRYAGPLHHQTQRFRASGVCRGSGQSP 247
Query: 251 --PLTADLLNNSMLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFG 293
P ++ L + P ++ G SG WCIFVYNL+PE +++VLWQLFG
Sbjct: 248 RDPQSSPLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFG 307
Query: 294 PFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
PFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 308 PFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 365
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 115 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 174
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 175 EAEEAIKGLNGQK 187
>gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]
Length = 360
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 233/345 (67%), Gaps = 39/345 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T + LGYGFVNY DA+
Sbjct: 35 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDAD 94
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 95 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 155 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 200 VKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKR 251
Query: 262 LPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD
Sbjct: 252 FSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 311
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 312 FTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 356
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 237
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M+
Sbjct: 238 RLDNLLNMAYGVKRFSPIAIDGMSG 262
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 38 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 97
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 98 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 157
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 158 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 202
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 203 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 251
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 252 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 311
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 312 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 341
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 122 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 181
Query: 85 IIELNGLKLQNKS--IKVSYA 103
I NG K S I V +A
Sbjct: 182 ITSFNGHKPPGSSEPITVKFA 202
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 28 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL-------- 79
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 80 -------GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 114
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 232/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERA+
Sbjct: 30 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVN 89
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP++MTQ+D+E++F +G II SR+L
Sbjct: 90 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLV 149
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 150 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 194
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 195 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 243
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 244 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 303
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 304 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 333
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+ MTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 114 KDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 173
Query: 85 IIELNGLK 92
I NG K
Sbjct: 174 ITSFNGHK 181
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 20 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 69
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 70 -----SLGYGFVNYVTAKDAERAVNTLNGLRLQ--SKTIKVSYA 106
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 231/330 (70%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERA+
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAVNTLNGLRLQ--SKTIKVSYA 96
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 229/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LW++FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWRMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G + +++++ DK+A ++
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL-------- 61
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 -------GYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 96
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 241/350 (68%), Gaps = 30/350 (8%)
Query: 6 EMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
EM N + H + + +NLIVNY+PQ+M+Q+EL+ LFSS+GEVES KLIRDK
Sbjct: 16 EMSNGYEDHM-VGGDEPKDAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAG 74
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
SLGYGFVNY DAERAI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK+MT
Sbjct: 75 HSLGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKNMT 134
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q+D+E++F YG II SR+L D+ +S+G+ F+RF++ EAE A
Sbjct: 135 QKDVEDMFSCYGRIINSRVLVDQSTG---------------MSRGVAFIRFDKRSEAEEA 179
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA 245
++ LNG P G +EPITVKFA +P + K N Q + + + R FG PLHH A
Sbjct: 180 VKSLNGQKPPGVTEPITVKFAANP-NQVK------NTQIISQLYHNQS-RRFGGPLHHQA 231
Query: 246 -RFKFAPLTADL---LNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
RF+F+P++ D + + +P S SGWCIF+YNL + ++++LWQ+FGPFGAV NV
Sbjct: 232 QRFRFSPMSVDHMGGMGSVGVPGNST--SGWCIFIYNLGQDADESILWQMFGPFGAVTNV 289
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KV+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 290 KVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSK 339
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 228/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D + S +
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMTGLSGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 363 bits (931), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 227/326 (69%), Gaps = 27/326 (8%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
LIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI L
Sbjct: 1 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 60
Query: 89 NGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDK 148
NGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L D+
Sbjct: 61 NGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQ 120
Query: 149 MASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANS 208
+S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA +
Sbjct: 121 TTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAAN 165
Query: 209 PAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLPPK 265
P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 166 P---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNVP 216
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY+E
Sbjct: 217 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 276
Query: 326 AVFAIQSLNGYALGDRLLQVSFKTHK 351
A AI SLNGY LGD++LQVSFKT+K
Sbjct: 277 AAMAIASLNGYRLGDKILQVSFKTNK 302
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 83 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 142
Query: 85 IIELNGLK 92
I NG K
Sbjct: 143 ITSFNGHK 150
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 230/330 (69%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAE+AI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + + +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAEKAINTLNGLRLQ--SKTIKVSYA 96
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 230/330 (69%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPI VKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPIAVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A S
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SL 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|209152513|gb|ACI33116.1| ELAV-like protein 1 [Salmo salar]
Length = 374
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 243/360 (67%), Gaps = 36/360 (10%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
MK E N H + + + +NLIVNY+PQ M+Q+EL+ LFSS+GEVES KLIRD
Sbjct: 37 MKQEAYDNGYDEH---MEDEPKDAKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRD 93
Query: 62 KTT--------AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRA 113
K + SLGYGFVNY DAERAI LNGL+LQ+K+IKVS+ARPSS+ IK A
Sbjct: 94 KVAGNPYHKNQSHSLGYGFVNYVNASDAERAINTLNGLRLQSKTIKVSFARPSSDGIKDA 153
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
NLY+SGLPK MTQ+D+E++F YG II SR+L D+ + +S+G+ F
Sbjct: 154 NLYISGLPKTMTQKDVEDMFTRYGRIINSRVLVDQASG---------------LSRGVAF 198
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+RF++ EAE A+++LNG P GASEPITVKFA SP +AK N+Q +
Sbjct: 199 IRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAASP-NQAK------NSQLINQLYHNQG 251
Query: 234 MRHFGNPLHHSA-RFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
R FG P+HH A RF+F+P++ D ++ S + + +GWCIF+YNL + ++ +LWQ+
Sbjct: 252 -RRFGGPVHHQAQRFRFSPMSVDHMSGMSTVSAQGNSTAGWCIFIYNLGQDADEGILWQM 310
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAV NVKV+RD T KCKGFGFV MTNY+EA AI SLNGY +GD++LQVSFKT K
Sbjct: 311 FGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDKILQVSFKTSK 370
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 228/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYA PSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYAHPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 96
>gi|53749734|ref|NP_001005461.1| ELAV-like protein 1 [Xenopus (Silurana) tropicalis]
gi|82236379|sp|Q6GLB5.1|ELAV1_XENTR RecName: Full=ELAV-like protein 1; AltName: Full=Protein ElrA
gi|49250885|gb|AAH74585.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 228/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVS ARPSSE+IK ANLY+SGLP+ MTQ+D+E++F P+G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSVARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQATG---------------LSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRHFA-AAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + R FG P+HH A RF+F+P+ D +++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHMSSISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
S SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VASSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD+ LQV FKT K
Sbjct: 296 EEAAMAIASLNGYRLGDKTLQVFFKTSK 323
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +F G + + +++ D+ T S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFLPFGRIINSRVLVDQATGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 IASFNGHK 171
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
+ I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL------------- 61
Query: 168 SKGIGFVRFNQHIEAEHAMQELNG 191
G GFV + +AE A+ LNG
Sbjct: 62 --GYGFVNYLNAKDAERAINTLNG 83
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 36 QTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQN 95
Q + L +F G V + K+IRD T + G+GFV E+A AI LNG +L +
Sbjct: 253 QDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGD 312
Query: 96 KSIKVSYARPSS 107
K+++V + S
Sbjct: 313 KTLQVFFKTSKS 324
>gi|426387253|ref|XP_004060088.1| PREDICTED: ELAV-like protein 3 isoform 2 [Gorilla gorilla gorilla]
Length = 366
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 238/360 (66%), Gaps = 53/360 (14%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
TVKFAN+P+ + QA + ++ R + PLHH + RF
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 242
Query: 248 --------------KFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D ++ + G+GWCIFVYNL+PE +++VLWQL
Sbjct: 243 RKLAGPRPPLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQL 302
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 303 FGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 362
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 170 EAEEAIKGLNGQK 182
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 229/330 (69%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+ ++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVVDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRHFA-AAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P++MTQ+++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRSMTQKDVVDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITNFNGHK 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 235/330 (71%), Gaps = 25/330 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLI+NY+PQ M+QEEL+ LFSS+GEVES KLIRDK SLGYGFVNY DAE
Sbjct: 14 SDAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPSDAE 73
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK MTQ+++E++F YG II S
Sbjct: 74 RAINTLNGLRLQSKTIKVSYARPSSDGIKDANLYISGLPKTMTQKNVEDMFTQYGRIINS 133
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D+ + +S+G+ F+RF++ EAE A+++LNG+ P GASEPIT
Sbjct: 134 RILVDQASG---------------LSRGVAFIRFDKRSEAEEAIKDLNGSKPSGASEPIT 178
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHS-ARFKFAPLTADLLNNSM 261
VKFA +P + N+Q + + + R FG P+HH RF+F+P++ D +SM
Sbjct: 179 VKFAANP-------NQSKNSQLLSQLYHTQS-RRFGGPVHHQPQRFRFSPMSVDHSVSSM 230
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
S SGWCIFVYNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 231 NVASSSS-SGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMT 289
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFK+ K
Sbjct: 290 NYEEAAMAISSLNGYRLGDKVLQVSFKSSK 319
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ V + Q + L +F G V + K+IRD T++ G+GFV E+A AI L
Sbjct: 242 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSL 301
Query: 89 NGLKLQNKSIKVSYARPSS 107
NG +L +K ++VS+ S
Sbjct: 302 NGYRLGDKVLQVSFKSSKS 320
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 227/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI NY+PQ MTQEELQ + SS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 2 TNLIENYLPQNMTQEELQGVLSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 61
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 62 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 121
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 122 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 166
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 167 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 217
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 218 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 277
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 278 EEAAMAIASLNGYRLGDKILQVSFKTNK 305
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 86 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 145
Query: 85 IIELNGLK 92
I NG K
Sbjct: 146 ITSFNGHK 153
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL + LP++MTQE+L+ + G + +++++ DK+A ++ G
Sbjct: 1 RTNLIENYLPQNMTQEELQGVLSSIGEVESAKLIRDKVAGHSL---------------GY 45
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
GFV + +AE A+ LNG + S+ I V +A
Sbjct: 46 GFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 78
>gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gallus]
gi|5738251|gb|AAD50314.1|AF176674_1 RNA-binding protein HuC [Gallus gallus]
Length = 365
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 228/342 (66%), Gaps = 39/342 (11%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ M+Q+EL+ LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 46 DDSKTNLIVNYLPQNMSQDELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDAD 105
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M Q+++E LF YG IITS
Sbjct: 106 KAISTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKAMGQKEMEQLFSQYGRIITS 165
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ IS+G+GF+RF++ +EAE A++ L+G P GA+EPIT
Sbjct: 166 RILVD---------------QVTGISRGVGFIRFDKRVEAEEAVRGLHGQKPLGATEPIT 210
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF-------------KF 249
VKFANSP +A A+ R + H RF +F
Sbjct: 211 VKFANSPGHKA----------GGALLSLCPGARRYSALQHAPQRFRLDSLLNVAYGVKRF 260
Query: 250 APLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQT 309
+PL + + ++ L GWCIFVYNLAPE +++V WQ FGPFGAV NVK++RD T
Sbjct: 261 SPLAIEAV-PALGAGVGLGSPGWCIFVYNLAPEADESVFWQFFGPFGAVTNVKIIRDFAT 319
Query: 310 YKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 320 NKCKGFGFVTMTNYDEAAVAIASLNGYRLGERVLQVSFKTSK 361
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+ M Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 129 SSASIRDANLYVSGLPKAMGQKEMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRV 188
Query: 80 DAERAIIELNGLK 92
+AE A+ L+G K
Sbjct: 189 EAEEAVRGLHGQK 201
>gi|1655901|gb|AAB17967.1| elav G homolog [Mus musculus]
Length = 326
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 228/328 (69%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ G P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+E+ AI SLNGY LGD++LQVSFKT+K
Sbjct: 296 EESAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I G K
Sbjct: 164 ITSFIGHK 171
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQE+L +LF G + +++++ DK+A ++
Sbjct: 17 IGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL--------------- 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 96
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 243/363 (66%), Gaps = 49/363 (13%)
Query: 12 QSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT------- 64
Q + + S + +NLIVNY+PQTMT+EE++ LFSSVGEVES KL+RDK
Sbjct: 55 QQNTTAASSGSDNARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPK 114
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
QSLGYGFVN++R++DAE+A+ LNGL+LQNK +KVS+ARPSSE IK ANLY+SGLPK +
Sbjct: 115 GQSLGYGFVNFHRSQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTI 174
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
TQE+LE +FRPYG IITSR+L + KG+GF+RF+Q EAE
Sbjct: 175 TQEELEIIFRPYGEIITSRVLVQDGNDK---------------PKGVGFIRFDQRKEAER 219
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKA------LAANLNAQAAAMRHFAAAMRHFG 238
A+ LNGT P+G ++PITVKF+N+P + A L LN Q R A
Sbjct: 220 AIAALNGTTPKGLTDPITVKFSNTPGQNSTAKIVQPALPTFLNPQLT--RRLGA------ 271
Query: 239 NPLHH---SARFKFAPLTADLLNNSMLPPKSLHG-------SGWCIFVYNLAPETEDNVL 288
+HH +F+P+ ++L+ MLP +G GW IF+YNLAPETE+N L
Sbjct: 272 --IHHPINKGLARFSPMGGEVLD-MMLPTAPTNGLGAVAPSGGWSIFIYNLAPETEENTL 328
Query: 289 WQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
WQLFGPFGAVQNVK+++D T +CKG+GFV MTNY+EA+ AI+SLNGY LG R+LQVSFK
Sbjct: 329 WQLFGPFGAVQNVKIIKDSATNQCKGYGFVTMTNYEEAMLAIRSLNGYTLGQRVLQVSFK 388
Query: 349 THK 351
T+K
Sbjct: 389 TNK 391
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 94 QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASEN 153
Q K + + A S R NL V+ LP+ MT+E++ +LF G + + +++ DK N
Sbjct: 51 QEKKQQNTTAASSGSDNARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDK----N 106
Query: 154 VRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
V G P+ S G GFV F++ +AE A+ LNG
Sbjct: 107 V--IYPGQPK--GQSLGYGFVNFHRSQDAEQAVNVLNG 140
>gi|225706444|gb|ACO09068.1| ELAV-like protein 1 [Osmerus mordax]
Length = 374
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 240/346 (69%), Gaps = 21/346 (6%)
Query: 5 EEMYNTTQSHRSTYQSDVN-EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT 63
+E+Y+ + + D + +NLIVNY+PQ+MTQ+EL+ LF S+GEVES KLIRDK
Sbjct: 12 KEVYDMSNGYEDHMGGDEGKDAKTNLIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKV 71
Query: 64 TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKH 123
SLGYGFVNY DAERAI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK
Sbjct: 72 AGHSLGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKT 131
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
MTQ+D+E++F YG II SR+L D+ + G + +S+G+ F+RF++ EAE
Sbjct: 132 MTQKDVEDMFARYGRIINSRVLVDQAS--------GGAGD--GLSRGVAFIRFDKRAEAE 181
Query: 184 HAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
A+++LNG P GASE ITVKFA SP +AK N Q + + + R FG P+HH
Sbjct: 182 DAIKDLNGQKPPGASEAITVKFAASP-NQAK------NTQLISQLYHNQS-RRFGGPVHH 233
Query: 244 SA-RFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
A RF+F+P++ D ++ S + S SGWCIF+YNL + ++ +LWQ+FGPFGAV NV
Sbjct: 234 QAQRFRFSPMSVDHMSGMSGVSVPSSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNV 293
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
KV+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQ F
Sbjct: 294 KVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQTRF 339
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 187/348 (53%), Positives = 235/348 (67%), Gaps = 37/348 (10%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLIVNY+P MTQEE++ LF+S+GEVESCKL+RDKTT +SLGY FV + R DAE+
Sbjct: 100 ENKTNLIVNYLPPNMTQEEVRALFTSIGEVESCKLVRDKTTGESLGYAFVKFVRPNDAEK 159
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQNK+IKVS ARPSSE+IK ANLY+ GLPK MTQ +LE F G IIT+R
Sbjct: 160 AIKTLNGLRLQNKTIKVSLARPSSESIKGANLYICGLPKKMTQVELEEQFSQCGKIITAR 219
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D +S+G+ F+RF+Q EAE A+++LNG +P+ +SEPITV
Sbjct: 220 ILYDNKTG---------------LSRGVAFIRFDQRCEAEMAIKKLNGHMPDNSSEPITV 264
Query: 204 KFANSPA--GRAKALAANLNAQAAAMRHFAAAMRHFGN------PLHHSA---RFKFAPL 252
KFANSP+ R L+ L QAA ++ A + N P+ A R K+
Sbjct: 265 KFANSPSTTTRQDNLSLALLKQAAQLQTAAVSAVSTPNRSNLLSPIQQLASISRLKYPSS 324
Query: 253 TADLL-----NNSMLPPK------SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
DLL N + P +L +GWCIFVYNL+PETE+ LWQLFGPFGAVQ V
Sbjct: 325 GIDLLPAMATANPLFAPAVAASTGALTATGWCIFVYNLSPETEEATLWQLFGPFGAVQTV 384
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKT 349
K+VRD T KCKGFGFV M+NY+EA+ +IQSLNG+ALG+R+LQVSFK+
Sbjct: 385 KIVRDSTTNKCKGFGFVTMSNYEEALLSIQSLNGFALGNRVLQVSFKS 432
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 247/365 (67%), Gaps = 46/365 (12%)
Query: 9 NTTQSHRSTYQSDVN---EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
NT + S Q+ N E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+
Sbjct: 124 NTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQG 183
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
QSLGYGFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MT
Sbjct: 184 QSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMT 243
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q++LE +F P+G IITSRIL + A + + +KG+GF+RF++ EA A
Sbjct: 244 QQELEAIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRA 289
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPL 241
+ LNGT P ++PI VKF+N+P +K L A LN Q +R G +
Sbjct: 290 IIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAM 340
Query: 242 H---HSARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDN 286
H + +F+P+ D+L + MLP S G + IF+YNLAPETE+
Sbjct: 341 HTPVNKGLARFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEA 399
Query: 287 VLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS 346
LWQLFGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVS
Sbjct: 400 ALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVS 459
Query: 347 FKTHK 351
FKT+K
Sbjct: 460 FKTNK 464
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 247/365 (67%), Gaps = 46/365 (12%)
Query: 9 NTTQSHRSTYQSDVN---EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
NT + S Q+ N E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+
Sbjct: 124 NTNGNAGSGSQNGSNGSSETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQG 183
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
QSLGYGFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MT
Sbjct: 184 QSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMT 243
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q++LE +F P+G IITSRIL + A + + +KG+GF+RF++ EA A
Sbjct: 244 QQELEAIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRA 289
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPL 241
+ LNGT P ++PI VKF+N+P +K L A LN Q +R G +
Sbjct: 290 IIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAM 340
Query: 242 H---HSARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDN 286
H + +F+P+ D+L + MLP S G + IF+YNLAPETE+
Sbjct: 341 HTPVNKGLARFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEA 399
Query: 287 VLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS 346
LWQLFGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVS
Sbjct: 400 ALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVS 459
Query: 347 FKTHK 351
FKT+K
Sbjct: 460 FKTNK 464
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 227/331 (68%), Gaps = 27/331 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ M+QEEL+ LFSS+GEVES KLIRDK SLGYGFVNY DAER
Sbjct: 16 DAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPSDAER 75
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK MTQ+D+E++F +G II SR
Sbjct: 76 AISTLNGLRLQSKNIKVSYARPSSDTIKDANLYISGLPKSMTQKDVEDMFSQFGRIINSR 135
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ +S+G+ F+RF++ EAE A+ LNG P A EPITV
Sbjct: 136 VLVDQATG---------------VSRGVAFIRFDKRAEAEDAINNLNGQKPSEAIEPITV 180
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLN--NS 260
KFA +P N Q + + F R FG PLHH A RF+F+P+ D +
Sbjct: 181 KFAANP-------NQTKNTQVIS-QLFHNQSRRFGGPLHHQAQRFRFSPMGVDHMGGVGG 232
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
+ P S + +GWCIF+YNL E ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV M
Sbjct: 233 VSVPTSSN-NGWCIFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTM 291
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+NY++A AI SLNGY LGD++LQVSFKT K
Sbjct: 292 SNYEDAAMAIASLNGYRLGDKILQVSFKTSK 322
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 231/339 (68%), Gaps = 38/339 (11%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK-----------TTAQSLGYGFVNY 75
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK + SLGYGFVNY
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNY 79
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRP 135
+DAERAI LNGL+LQ+K+IKVS+ARPSSE+IK ANLY+SGLP+ MTQ+D+E++F P
Sbjct: 80 LNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVEDMFLP 139
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
+G II SR+L D+ +S+G+ F+RF++ EAE A+ NG P
Sbjct: 140 FGHIINSRVLVDQATG---------------LSRGVAFIRFDKRSEAEEAIASFNGHKPP 184
Query: 196 GASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA-AAMRHFGNPLHHSA-RFKFAPLT 253
G+SEPITVKFA +P N N A + + R FG P+HH A RF+F+P+
Sbjct: 185 GSSEPITVKFAANP---------NQNKNVALLSQICHSPARRFGGPVHHQAQRFRFSPMG 235
Query: 254 ADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
D +++ S + S SGWCIFVYNL + ++ +LWQ+FGPFGAV NVKV+RD T KC
Sbjct: 236 VDHMSSISSVNVASSATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKC 295
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KGFGFV MTNY+EA AI SLNGY LGD+ LQVSFKT K
Sbjct: 296 KGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSFKTSK 334
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 14/103 (13%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
+ I R NL V+ LP++MTQ++L +LF G + +++++ DK+A +RS +
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRS--------SSL 66
Query: 168 SK----GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
SK G GFV + +AE A+ LNG + S+ I V FA
Sbjct: 67 SKGHSLGYGFVNYLNAKDAERAINTLNGLRLQ--SKTIKVSFA 107
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 67/219 (30%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +F G + + +++ D+ T S G F+ + + +AE A
Sbjct: 115 KDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEA 174
Query: 85 IIELNGLKL----------------QNKSI------------------------------ 98
I NG K QNK++
Sbjct: 175 IASFNGHKPPGSSEPITVKFAANPNQNKNVALLSQICHSPARRFGGPVHHQAQRFRFSPM 234
Query: 99 ------KVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
+S +S A ++V L + + L +F P+G + +++ D ++
Sbjct: 235 GVDHMSSISSVNVASSATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNK 294
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
KG GFV + EA A+ LNG
Sbjct: 295 ---------------CKGFGFVTMTNYEEAAMAIASLNG 318
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ V + Q + L +F G V + K+IRD T + G+GFV E+A AI L
Sbjct: 257 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 316
Query: 89 NGLKLQNKSIKVSYARPSS 107
NG +L +K+++VS+ S
Sbjct: 317 NGYRLGDKTLQVSFKTSKS 335
>gi|18858613|ref|NP_571527.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Danio rerio]
gi|6694223|gb|AAF25187.1|AF184244_1 ribonucleoprotein [Danio rerio]
Length = 324
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 233/332 (70%), Gaps = 29/332 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ M+Q+EL+ LFSS+GEVES KLIRDK SLGYGFVNY DAER
Sbjct: 15 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPNDAER 74
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K+IKVSYARPSS++IK ANLY+SGLPK MTQ+D+E +F YG II SR
Sbjct: 75 AISTLNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSR 134
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ + +S+G+ F+RF++ EAE A+++LNG P GA+E +TV
Sbjct: 135 VLVDQASG---------------LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTV 179
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSM- 261
KFA SP + K N Q + + R FG P+HH A RF+F+P++ D ++
Sbjct: 180 KFAASP-NQVK------NTQVIPQVYHQQS-RRFGGPVHHQAQRFRFSPMSVDHMSGMSG 231
Query: 262 --LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+P S SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 232 VNVPGNS--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 289
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MT+Y+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 290 MTHYEEAAMAIASLNGYRLGDKILQVSFKTSK 321
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV E+A AI LNG +L +K ++VS+
Sbjct: 258 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASLNGYRLGDKILQVSF 317
Query: 103 ARPSS 107
S
Sbjct: 318 KTSKS 322
>gi|28279908|gb|AAH44184.1| Elavl1 protein [Danio rerio]
Length = 324
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 233/332 (70%), Gaps = 29/332 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ M+Q+EL+ LFSS+GEVES KLIRDK SLGYGFVNY DAER
Sbjct: 15 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPNDAER 74
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K+IKVSYARPSS++IK ANLY+SGLPK MTQ+D+E +F YG II SR
Sbjct: 75 AISTLNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSR 134
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ + +S+G+ F+RF++ EAE A+++LNG P GA+E +TV
Sbjct: 135 VLVDQASG---------------LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTV 179
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSM- 261
KFA SP + K N Q + + R FG P+HH A RF+F+P++ D ++
Sbjct: 180 KFAASP-NQVK------NTQVIPQVYHQQS-RRFGGPVHHQAQRFRFSPMSVDHMSGMSG 231
Query: 262 --LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+P S SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 232 VNVPGNS--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 289
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MT+Y+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 290 MTHYEEAAMAIASLNGYRLGDKILQVSFKTSK 321
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV E+A AI LNG +L +K ++VS+
Sbjct: 258 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASLNGYRLGDKILQVSF 317
Query: 103 ARPSS 107
S
Sbjct: 318 KTSKS 322
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 227/329 (68%), Gaps = 30/329 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPK 265
+P N N A + + + R FG P RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPPPSKGRFRFSPMGVDHM--SGLSGV 233
Query: 266 SLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTN
Sbjct: 234 NVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 293
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
Y+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 YEEAAMAIASLNGYRLGDKILQVSFKTNK 322
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 229/330 (69%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+F PFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFEPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVS KT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSLKTNK 323
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A S
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SL 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 229/330 (69%), Gaps = 31/330 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGF+NY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFLNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E+ F + II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDTFSRFWRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPP 264
+P N N A + + + R FG P+HH A RF+F+P+ D + S L
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSG 233
Query: 265 KSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 293
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 NYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ FS + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDTFSRFWRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GF+ + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFLNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/358 (52%), Positives = 238/358 (66%), Gaps = 39/358 (10%)
Query: 14 HRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFV 73
R + S+ + +NLIVNY+P MTQEE++ LFSS+G VESCKL+RDKTT +SLGY FV
Sbjct: 40 DRKSNLSNSLDNKTNLIVNYLPPNMTQEEVRALFSSIGVVESCKLVRDKTTGESLGYSFV 99
Query: 74 NYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLF 133
Y DAE+AI LNGL+LQNK+IKVS ARPSSEAIK ANLY+ GLPK MTQ +LENLF
Sbjct: 100 KYLNYPDAEKAIRTLNGLRLQNKTIKVSLARPSSEAIKGANLYICGLPKKMTQMELENLF 159
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
G IIT+RIL D +S+G+ F+RF+Q EA+ A+++LN
Sbjct: 160 SQCGKIITARILYDNKTG---------------LSRGVAFIRFDQRSEAQLAIKKLNSYQ 204
Query: 194 PEGASEPITVKFANSPAG-----------RAKALAANLNAQAAAMRHFAAAMRHFGNPLH 242
PE ++EPI VKFANSP+ + A N NAQ+A + ++ + L
Sbjct: 205 PENSTEPIIVKFANSPSTSRQDNISLAILKQAAQIPNQNAQSANPQSRSSLISPLQQ-LA 263
Query: 243 HSARFKFAPLTADLL-----NNSMLPPK------SLHGSGWCIFVYNLAPETEDNVLWQL 291
AR K+ P + D + NNS+L P +L +GWCIFVYNLAPET+D LWQL
Sbjct: 264 SVARLKY-PTSMDFMPSLTGNNSLLAPAFAASTGALTATGWCIFVYNLAPETDDATLWQL 322
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKT 349
FGPFGAVQ VK++RD T KCKGFGFV M+NY+EA+ AIQSLNG+ LG+R+LQVSFKT
Sbjct: 323 FGPFGAVQTVKIIRDTATNKCKGFGFVTMSNYEEALLAIQSLNGFTLGNRILQVSFKT 380
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T L LF G V++ K+IRD T + G+GFV E+A AI L
Sbjct: 306 FVYNLAPET-DDATLWQLFGPFGAVQTVKIIRDTATNKCKGFGFVTMSNYEEALLAIQSL 364
Query: 89 NGLKLQNKSIKVSYARPSSEAIK 111
NG L N+ ++VS+ + IK
Sbjct: 365 NGFTLGNRILQVSFKTTPNPKIK 387
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 230/328 (70%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVS+ARPSSE IK ANLY+SGLP+ MTQ+D+E++F P+G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSFARPSSETIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQATG---------------LSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 184
Query: 207 NSP-AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P + AL + + A R FG P+HH A RF+F+P+ D +++ S +
Sbjct: 185 ANPNQSKNMALLSQICHSPA---------RRFGGPVHHQAQRFRFSPMGVDHMSSISSVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
S SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VASSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SLNGY LGD+ LQVSFKT K
Sbjct: 296 EEAAMAIASLNGYRLGDKTLQVSFKTSK 323
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +F G + + +++ D+ T S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 IASFNGHK 171
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV E+A AI LNG +L +K+++VS+
Sbjct: 260 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSF 319
Query: 103 ARPSS 107
S
Sbjct: 320 KTSKS 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
+ I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL------------- 61
Query: 168 SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V FA
Sbjct: 62 --GYGFVNYLNAKDAERAINTLNGLRLQ--SKTIKVSFA 96
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 226/332 (68%), Gaps = 29/332 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ M+QEEL+ LFSS+GEVES KLIRDK SLGYGFVNY DAER
Sbjct: 32 DAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPSDAER 91
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K+IKVSYARPSS+ IK ANLY+SGLPK MTQ+D+E++F +G II SR
Sbjct: 92 AINTLNGLRLQSKNIKVSYARPSSDTIKDANLYISGLPKSMTQKDVEDMFSRFGRIINSR 151
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ S+G+ F+RF++ EAE A+ LNG P G EPITV
Sbjct: 152 VLVDQATGA---------------SRGVAFIRFDKRAEAEDAVNNLNGQKPSGVVEPITV 196
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLL---NN 259
KFA +P N Q + + F R FG PLHH A RF+F+P++ D +
Sbjct: 197 KFAANP-------NQTKNTQVIS-QLFHNQSRRFGGPLHHQAQRFRFSPMSVDHMGGVGG 248
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+P S +GWCIF+YNL E ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 249 VSVPTNS--NNGWCIFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFTTNKCKGFGFVT 306
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
M+NY++A AI SLNGY LG+++LQVSFKT K
Sbjct: 307 MSNYEDAAMAIASLNGYRLGEKILQVSFKTSK 338
>gi|26347149|dbj|BAC37223.1| unnamed protein product [Mus musculus]
Length = 326
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/328 (54%), Positives = 226/328 (68%), Gaps = 27/328 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+ Q MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLHQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNN-SMLP 263
+P N N A + + + R FG P+HH A RF+F+P+ D ++ S +
Sbjct: 185 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVN 235
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 236 VPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 295
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI SL Y LGD++LQVSFKT+K
Sbjct: 296 EEAAMAIASLKRYRLGDKILQVSFKTNK 323
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ L ++MTQE+L +LF G + +++++ DK+A ++
Sbjct: 10 AEDCRDDIGRTNLIVNYLHQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL-------- 61
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 -------GYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 96
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 233/329 (70%), Gaps = 26/329 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ+M+QEEL+ LFSSVG+VES KLIRDK SLGYGFVN+ DA R
Sbjct: 52 DARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAVR 111
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K++KVSYARPSSE IK ANLY+SGLP+ +Q+DLE++F YG II SR
Sbjct: 112 AINTLNGLRLQSKTLKVSYARPSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSR 171
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ + +S+G+ F+RF++ EAE A++ LNG P G++EPITV
Sbjct: 172 VLVDQASG---------------VSRGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITV 216
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSML 262
KFA +P +A + + +Q M H R FG P+HH A RF+F+P++ D +++S
Sbjct: 217 KFATNP---NQARGSQVMSQ---MYH--GQSRRFGGPVHHQAQRFRFSPMSVDHVSSSSA 268
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
+GWCIF+YNL E ++ +LWQLFGPFGAV NVKV+RD T KCKGFGFV M+N
Sbjct: 269 --SGNSPNGWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSN 326
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
Y+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 327 YEEAAMAIHSLNGYRLGDKVLQVSFKTSK 355
>gi|410928269|ref|XP_003977523.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Takifugu rubripes]
Length = 334
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 239/348 (68%), Gaps = 29/348 (8%)
Query: 5 EEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT 64
+E+YN + D +NLIVNY+PQ+M+QEEL+ LFSSVG+VES KLIRDK
Sbjct: 12 KELYNNGFEDQLMEDEDAR---TNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVA 68
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
SLGYGFVN+ DA RAI LNGL+LQ+K++KVSYARPSSE IK ANLY+SGLP+
Sbjct: 69 GHSLGYGFVNFVNPSDAVRAINTLNGLRLQSKTLKVSYARPSSEMIKDANLYISGLPRTA 128
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+Q+DLE++F YG II SR+L D+ + +S+G+ F+RF++ EAE
Sbjct: 129 SQQDLEDMFSHYGRIINSRVLVDQASG---------------VSRGVAFIRFDKRSEAED 173
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHS 244
A++ LNG P G++EPITVKFA +P +A + + +Q M H R FG P+HH
Sbjct: 174 AIKHLNGHTPPGSAEPITVKFATNP---NQARGSQVMSQ---MYH--GQSRRFGGPVHHQ 225
Query: 245 A-RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV 303
A RF+F+P++ D +++S +GWCIF+YNL E ++ +LWQLFGPFGAV NVKV
Sbjct: 226 AQRFRFSPMSVDHVSSSSA--SGNSPNGWCIFIYNLGQEADEAILWQLFGPFGAVVNVKV 283
Query: 304 VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+RD T KCKGFGFV M+NY+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 284 IRDFNTSKCKGFGFVTMSNYEEAAMAIHSLNGYRLGDKVLQVSFKTSK 331
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/343 (53%), Positives = 231/343 (67%), Gaps = 44/343 (12%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RF-------------KFAP 251
+P N N A + + + R FG P+HH A RF +F+P
Sbjct: 185 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRWVGRRHAASGVQRFSP 235
Query: 252 LTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
+ D + S L ++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD
Sbjct: 236 MGVDHM--SGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFN 293
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 294 TNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 336
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------- 59
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 60 -----SLGYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/349 (52%), Positives = 232/349 (66%), Gaps = 50/349 (14%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 5 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 64
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP++MTQ+D+E++F +G II SR+L
Sbjct: 65 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLV 124
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 125 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 169
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RF----------------- 247
+P N N A + + + R FG P+HH A RF
Sbjct: 170 ANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRQESDHDLQGQTKGKSK 220
Query: 248 --KFAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+F+P+ D + S L ++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVK
Sbjct: 221 EGRFSPMGVDHM--SGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVK 278
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 279 VIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+ MTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 89 KDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 148
Query: 85 IIELNGLK 92
I NG K
Sbjct: 149 ITSFNGHK 156
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 2 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL--------------- 46
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 47 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 81
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 228/345 (66%), Gaps = 44/345 (12%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEEL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 12 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 71
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 72 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 131
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 132 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 176
Query: 207 NSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKF-APLTADLLNNSMLP 263
+P N N A + + + R FG P+HH A RF++ L DL S+
Sbjct: 177 ANP---------NQNKNMALLSQLYHSPARRFGGPVHHQAQRFRYTTSLNLDLNVCSLFA 227
Query: 264 PKSLHG-----------------SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
S G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD
Sbjct: 228 RFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 287
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 288 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 332
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 96 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 155
Query: 85 IIELNGLK 92
I NG K
Sbjct: 156 ITSFNGHK 163
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQE+L +LF G + +++++ DK+A
Sbjct: 2 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGH---------- 51
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 52 -----SLGYGFVNYVTAKDAERAISTLNGLRLQ--SKTIKVSYA 88
>gi|348504908|ref|XP_003440003.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 361
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 234/329 (71%), Gaps = 25/329 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ+M+Q+EL+ LFSSVGEVES KLIRDK SLGYGFVN+ DAER
Sbjct: 54 DARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPSDAER 113
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K+IKVS+ARPSS+AIK ANLY+SGLP+ ++Q+D+E++F YG II SR
Sbjct: 114 AISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSR 173
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ + +S+G+ F+RF++ EA+ A++ LNG P G++EPITV
Sbjct: 174 VLVDQASG---------------LSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITV 218
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSML 262
KFA +P +A + + +Q M H R FG P+HH A RF+F+P++ D ++
Sbjct: 219 KFAANP---NQARNSQMMSQ---MYH--GQSRRFGGPVHHQAQRFRFSPMSTDHMSGGGG 270
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
S SGWCIF+YNL E ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV M N
Sbjct: 271 ASGSSS-SGWCIFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMAN 329
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
Y+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 330 YEEAAMAIHSLNGYRLGDKVLQVSFKTSK 358
>gi|194768871|ref|XP_001966534.1| GF22224 [Drosophila ananassae]
gi|190617298|gb|EDV32822.1| GF22224 [Drosophila ananassae]
Length = 490
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 241/361 (66%), Gaps = 56/361 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 153 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 212
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 213 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 272
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 273 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 318
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 319 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 369
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 370 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 428
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 429 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 488
Query: 352 P 352
P
Sbjct: 489 P 489
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 223/329 (67%), Gaps = 50/329 (15%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 NSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPPK 265
+P NP+HH A RF+F+P+ D + S L
Sbjct: 185 ANP-----------------------------NPVHHQAQRFRFSPMGVDHM--SGLSGV 213
Query: 266 SLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTN
Sbjct: 214 NVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 273
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
Y+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 274 YEEAAMAIASLNGYRLGDKILQVSFKTNK 302
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 46/198 (23%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLKLQNKS--IKVSYA---RPSSEAIKRAN------------------------- 114
I NG K S I V +A P +R
Sbjct: 164 ITSFNGHKPPGSSEPITVKFAANPNPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGW 223
Query: 115 -LYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
+++ L + + L +F P+G + +++ D ++ KG GF
Sbjct: 224 CIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNK---------------CKGFGF 268
Query: 174 VRFNQHIEAEHAMQELNG 191
V + EA A+ LNG
Sbjct: 269 VTMTNYEEAAMAIASLNG 286
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A S
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SL 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|348504906|ref|XP_003440002.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 335
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 234/329 (71%), Gaps = 25/329 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ+M+Q+EL+ LFSSVGEVES KLIRDK SLGYGFVN+ DAER
Sbjct: 28 DARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPSDAER 87
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQ+K+IKVS+ARPSS+AIK ANLY+SGLP+ ++Q+D+E++F YG II SR
Sbjct: 88 AISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSR 147
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D+ + +S+G+ F+RF++ EA+ A++ LNG P G++EPITV
Sbjct: 148 VLVDQASG---------------LSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITV 192
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSML 262
KFA +P +A + + +Q M H R FG P+HH A RF+F+P++ D ++
Sbjct: 193 KFAANP---NQARNSQMMSQ---MYH--GQSRRFGGPVHHQAQRFRFSPMSTDHMSGGGG 244
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
S SGWCIF+YNL E ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV M N
Sbjct: 245 ASGSSS-SGWCIFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMAN 303
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
Y+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 304 YEEAAMAIHSLNGYRLGDKVLQVSFKTSK 332
>gi|432853220|ref|XP_004067599.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oryzias latipes]
Length = 335
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 233/330 (70%), Gaps = 25/330 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ+MTQ+EL+ LFSSVGEVES KLIRDK SLGYGFVN+ DAE
Sbjct: 27 DDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAE 86
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI LNGL+LQ+K+IKVS+ARPSS+ IK ANLY+SGLP+ + Q+DLE++F +G II S
Sbjct: 87 RAISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINS 146
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
R+L D+ + +S+G+ F+RF++ EAE A++ LNG P G SEPIT
Sbjct: 147 RVLVDQASG---------------LSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPIT 191
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFA +P +A + + +Q M H R FG P+HH + RF+F+P++ D + N
Sbjct: 192 VKFAVNP---NQARNSQMMSQ---MYH--GQSRRFGGPVHHQTQRFRFSPMSTDHMGNGG 243
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+ SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 244 GASGNAS-SGWCIFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMT 302
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY +GD++LQVSFKT K
Sbjct: 303 NYEEAAMAIHSLNGYRMGDKVLQVSFKTSK 332
>gi|432853218|ref|XP_004067598.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oryzias latipes]
Length = 356
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 233/330 (70%), Gaps = 25/330 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ+MTQ+EL+ LFSSVGEVES KLIRDK SLGYGFVN+ DAE
Sbjct: 48 DDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAE 107
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI LNGL+LQ+K+IKVS+ARPSS+ IK ANLY+SGLP+ + Q+DLE++F +G II S
Sbjct: 108 RAISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINS 167
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
R+L D+ + +S+G+ F+RF++ EAE A++ LNG P G SEPIT
Sbjct: 168 RVLVDQASG---------------LSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPIT 212
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSM 261
VKFA +P +A + + +Q M H R FG P+HH + RF+F+P++ D + N
Sbjct: 213 VKFAVNP---NQARNSQMMSQ---MYH--GQSRRFGGPVHHQTQRFRFSPMSTDHMGNGG 264
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+ SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 265 GASGNAS-SGWCIFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMT 323
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NY+EA AI SLNGY +GD++LQVSFKT K
Sbjct: 324 NYEEAAMAIHSLNGYRMGDKVLQVSFKTSK 353
>gi|432853222|ref|XP_004067600.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oryzias latipes]
Length = 346
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 239/332 (71%), Gaps = 18/332 (5%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ+MTQ+EL+ LFSSVGEVES KLIRDK SLGYGFVN+ DAE
Sbjct: 27 DDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAE 86
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI LNGL+LQ+K+IKVS+ARPSS+ IK ANLY+SGLP+ + Q+DLE++F +G II S
Sbjct: 87 RAISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINS 146
Query: 143 RILCDKMA--SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
R+L D+ + S ++ + SG +S+G+ F+RF++ EAE A++ LNG P G SEP
Sbjct: 147 RVLVDQASGTSGDICNPPSG------LSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEP 200
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNN 259
ITVKFA +P +A + + +Q M H R FG P+HH + RF+F+P++ D + N
Sbjct: 201 ITVKFAVNP---NQARNSQMMSQ---MYH--GQSRRFGGPVHHQTQRFRFSPMSTDHMGN 252
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 253 GGGASGNAS-SGWCIFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVT 311
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNY+EA AI SLNGY +GD++LQVSFKT K
Sbjct: 312 MTNYEEAAMAIHSLNGYRMGDKVLQVSFKTSK 343
>gi|18079265|ref|NP_525033.1| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|386763527|ref|NP_001245447.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
gi|119264|sp|P16914.1|ELAV_DROME RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157340|gb|AAA28506.1| elav protein [Drosophila melanogaster]
gi|4455922|emb|CAB37430.1| EG:65F1.2 [Drosophila melanogaster]
gi|15291955|gb|AAK93246.1| LD33076p [Drosophila melanogaster]
gi|22831422|gb|AAF45517.2| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|220946076|gb|ACL85581.1| elav-PA [synthetic construct]
gi|220955740|gb|ACL90413.1| elav-PA [synthetic construct]
gi|383293116|gb|AFH07163.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
Length = 483
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 190/378 (50%), Positives = 247/378 (65%), Gaps = 59/378 (15%)
Query: 9 NTTQSHRSTYQSDVN---EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-- 63
NT + S Q+ N E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+
Sbjct: 128 NTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQV 187
Query: 64 -----------TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR 112
QSLGYGFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK
Sbjct: 188 YIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKG 247
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK MTQ++LE +F P+G IITSRIL + A + ++ KG+G
Sbjct: 248 ANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN--AGNDTQT------------KGVG 293
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMR 228
F+RF++ EA A+ LNGT P ++PI VKF+N+P +K L A LN Q
Sbjct: 294 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---- 349
Query: 229 HFAAAMRHFGNPLH---HSARFKFAPLTADLLNNSMLP------------PKSLHGSGWC 273
+R G +H + +F+P+ D+L+ MLP S G +
Sbjct: 350 -----VRRIGGAMHTPVNKGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYP 403
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IF+YNLAPETE+ LWQLFGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++L
Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463
Query: 334 NGYALGDRLLQVSFKTHK 351
NGY +G+R+LQVSFKT+K
Sbjct: 464 NGYTMGNRVLQVSFKTNK 481
>gi|62473376|ref|NP_001014713.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|221329608|ref|NP_001138142.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]
gi|61677860|gb|AAX52472.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|220901638|gb|ACL82875.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
Length = 479
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 190/378 (50%), Positives = 247/378 (65%), Gaps = 59/378 (15%)
Query: 9 NTTQSHRSTYQSDVN---EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-- 63
NT + S Q+ N E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+
Sbjct: 124 NTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQV 183
Query: 64 -----------TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR 112
QSLGYGFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK
Sbjct: 184 YIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKG 243
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK MTQ++LE +F P+G IITSRIL + A + ++ KG+G
Sbjct: 244 ANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN--AGNDTQT------------KGVG 289
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMR 228
F+RF++ EA A+ LNGT P ++PI VKF+N+P +K L A LN Q
Sbjct: 290 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---- 345
Query: 229 HFAAAMRHFGNPLH---HSARFKFAPLTADLLNNSMLP------------PKSLHGSGWC 273
+R G +H + +F+P+ D+L+ MLP S G +
Sbjct: 346 -----VRRIGGAMHTPVNKGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYP 399
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IF+YNLAPETE+ LWQLFGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++L
Sbjct: 400 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 459
Query: 334 NGYALGDRLLQVSFKTHK 351
NGY +G+R+LQVSFKT+K
Sbjct: 460 NGYTMGNRVLQVSFKTNK 477
>gi|195469519|ref|XP_002099685.1| GE16581 [Drosophila yakuba]
gi|194187209|gb|EDX00793.1| GE16581 [Drosophila yakuba]
Length = 478
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 190/378 (50%), Positives = 247/378 (65%), Gaps = 59/378 (15%)
Query: 9 NTTQSHRSTYQSDVN---EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-- 63
NT + S Q+ N E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+
Sbjct: 123 NTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQV 182
Query: 64 -----------TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR 112
QSLGYGFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK
Sbjct: 183 YIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKG 242
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK MTQ++LE +F P+G IITSRIL + A + ++ KG+G
Sbjct: 243 ANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN--AGNDTQT------------KGVG 288
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMR 228
F+RF++ EA A+ LNGT P ++PI VKF+N+P +K L A LN Q
Sbjct: 289 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---- 344
Query: 229 HFAAAMRHFGNPLH---HSARFKFAPLTADLLNNSMLP------------PKSLHGSGWC 273
+R G +H + +F+P+ D+L+ MLP S G +
Sbjct: 345 -----VRRIGGAMHTPVNKGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYP 398
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IF+YNLAPETE+ LWQLFGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++L
Sbjct: 399 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 458
Query: 334 NGYALGDRLLQVSFKTHK 351
NGY +G+R+LQVSFKT+K
Sbjct: 459 NGYTMGNRVLQVSFKTNK 476
>gi|195042014|ref|XP_001991348.1| GH12602 [Drosophila grimshawi]
gi|193901106|gb|EDV99972.1| GH12602 [Drosophila grimshawi]
Length = 511
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 174 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 233
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 234 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 293
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 294 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 339
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 340 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 390
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 391 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 449
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 450 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 509
>gi|397520903|ref|XP_003830547.1| PREDICTED: ELAV-like protein 3 isoform 2 [Pan paniscus]
Length = 311
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 222/330 (67%), Gaps = 39/330 (11%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA++AI LNGLKLQ K+
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSRIL D
Sbjct: 61 IKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVD---------- 110
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ +
Sbjct: 111 -----QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKT---- 161
Query: 218 ANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSMLPPKSLHG-SG---- 271
QA + ++ R + PLHH + RF+ L P ++ G SG
Sbjct: 162 ----GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGV 217
Query: 272 ----------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 218 GLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMT 277
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 278 NYDEAAMAIASLNGYRLGERVLQVSFKTSK 307
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 69 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 128
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 129 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 188
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 189 RLDNLLNMAYGVKRFSPIAIDGMS 212
>gi|195402031|ref|XP_002059614.1| embryonic lethal, abnormal vision [Drosophila virilis]
gi|194147321|gb|EDW63036.1| embryonic lethal, abnormal vision [Drosophila virilis]
Length = 516
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 179 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 238
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 239 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 298
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 299 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 344
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 345 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 395
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 396 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 454
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 455 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 514
>gi|195165322|ref|XP_002023488.1| GL20165 [Drosophila persimilis]
gi|194105593|gb|EDW27636.1| GL20165 [Drosophila persimilis]
Length = 496
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 159 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 218
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 219 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 278
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 279 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 324
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 325 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 375
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 376 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 434
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 435 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 494
>gi|119265|sp|P23241.1|ELAV_DROVI RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157338|gb|AAA28505.1| ELAV [Drosophila virilis]
Length = 519
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 182 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 241
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 242 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 301
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 302 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 347
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 348 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 398
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 399 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 457
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 458 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 517
>gi|195130285|ref|XP_002009582.1| GI15436 [Drosophila mojavensis]
gi|193908032|gb|EDW06899.1| GI15436 [Drosophila mojavensis]
Length = 475
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 138 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 197
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 198 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 257
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 258 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 303
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 304 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 354
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 355 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 413
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 414 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 473
>gi|198468704|ref|XP_001354795.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
gi|198146532|gb|EAL31850.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
Length = 496
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 159 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 218
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 219 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 278
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 279 AIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 324
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 325 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 375
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 376 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 434
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 435 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 494
>gi|195439330|ref|XP_002067584.1| GK16120 [Drosophila willistoni]
gi|194163669|gb|EDW78570.1| GK16120 [Drosophila willistoni]
Length = 509
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 241/360 (66%), Gaps = 56/360 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 172 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 231
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 232 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 291
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
++F P+G IITSRIL + A + ++ KG+GF+RF++ EA A+ LN
Sbjct: 292 SIFAPFGAIITSRILQN--AGNDTQT------------KGVGFIRFDKREEATRAIIALN 337
Query: 191 GTIPEGASEPITVKFANSPAGRAKA----LAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 338 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---------VRRIGGAMHTPVN 388
Query: 244 SARFKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+F+P+ D+L+ MLP S G + IF+YNLAPETE+ LWQL
Sbjct: 389 KGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQL 447
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++LNGY +G+R+LQVSFKT+K
Sbjct: 448 FGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 507
>gi|426229025|ref|XP_004008594.1| PREDICTED: ELAV-like protein 3 isoform 2 [Ovis aries]
Length = 318
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/337 (52%), Positives = 227/337 (67%), Gaps = 46/337 (13%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA++AI LNGLKLQ K+
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSRIL D
Sbjct: 61 IKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVD---------- 110
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ +
Sbjct: 111 -----QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQK----- 160
Query: 218 ANLNAQAAAMRHFAAAMRHFGNPLHH-SARF--------------------KFAPLTADL 256
QA + + ++ R + PLHH + RF +F+P+ D
Sbjct: 161 ---TGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDG 217
Query: 257 LNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKG
Sbjct: 218 MSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 277
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 278 FGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 314
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 69 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 128
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 129 EAEEAIKGLNGQK 141
>gi|410928273|ref|XP_003977525.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Takifugu rubripes]
Length = 368
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 178/339 (52%), Positives = 234/339 (69%), Gaps = 36/339 (10%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT----------AQSLGYGFV 73
+ +NLIVNY+PQ+M+QEEL+ LFSSVG+VES KLIRDK + SLGYGFV
Sbjct: 52 DARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGNTQTLVHHRSHSLGYGFV 111
Query: 74 NYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLF 133
N+ DA RAI LNGL+LQ+K++KVSYARPSSE IK ANLY+SGLP+ +Q+DLE++F
Sbjct: 112 NFVNPSDAVRAINTLNGLRLQSKTLKVSYARPSSEMIKDANLYISGLPRTASQQDLEDMF 171
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
YG II SR+L D+ + +S+G+ F+RF++ EAE A++ LNG
Sbjct: 172 SHYGRIINSRVLVDQASG---------------VSRGVAFIRFDKRSEAEDAIKHLNGHT 216
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPL 252
P G++EPITVKFA +P +A + + +Q + R FG P+HH A RF+F+P+
Sbjct: 217 PPGSAEPITVKFATNPN---QARGSQVMSQM-----YHGQSRRFGGPVHHQAQRFRFSPM 268
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ D +++S S +GWCIF+YNL E ++ +LWQLFGPFGAV NVKV+RD T KC
Sbjct: 269 SVDHVSSSSASGNS--PNGWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKC 326
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KGFGFV M+NY+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 327 KGFGFVTMSNYEEAAMAIHSLNGYRLGDKVLQVSFKTSK 365
>gi|395850847|ref|XP_003797985.1| PREDICTED: ELAV-like protein 3 isoform 1 [Otolemur garnettii]
gi|397520901|ref|XP_003830546.1| PREDICTED: ELAV-like protein 3 isoform 1 [Pan paniscus]
gi|402904297|ref|XP_003914983.1| PREDICTED: ELAV-like protein 3 isoform 1 [Papio anubis]
gi|403302356|ref|XP_003941826.1| PREDICTED: ELAV-like protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|410950488|ref|XP_003981937.1| PREDICTED: ELAV-like protein 3 isoform 2 [Felis catus]
gi|14280337|gb|AAK57545.1| Hu antigen C long [Homo sapiens]
Length = 318
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 178/337 (52%), Positives = 226/337 (67%), Gaps = 46/337 (13%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA++AI LNGLKLQ K+
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSRIL D
Sbjct: 61 IKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVD---------- 110
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ +
Sbjct: 111 -----QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQK----- 160
Query: 218 ANLNAQAAAMRHFAAAMRHFGNPLHH-SARF--------------------KFAPLTADL 256
QA + ++ R + PLHH + RF +F+P+ D
Sbjct: 161 ---TGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDG 217
Query: 257 LNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKG
Sbjct: 218 MSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 277
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 278 FGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 314
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 69 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 128
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 129 EAEEAIKGLNGQK 141
>gi|348504910|ref|XP_003440004.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oreochromis
niloticus]
Length = 369
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/337 (52%), Positives = 233/337 (69%), Gaps = 33/337 (9%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT--------AQSLGYGFVNY 75
+ +NLIVNY+PQ+M+Q+EL+ LFSSVGEVES KLIRDK + SLGYGFVN+
Sbjct: 54 DARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGNDETKNESHSLGYGFVNF 113
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRP 135
DAERAI LNGL+LQ+K+IKVS+ARPSS+AIK ANLY+SGLP+ ++Q+D+E++F
Sbjct: 114 VNPSDAERAISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQDVEDMFSH 173
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
YG II SR+L D+ + +S+G+ F+RF++ EA+ A++ LNG P
Sbjct: 174 YGRIINSRVLVDQASG---------------LSRGVAFIRFDKRAEADDAVKHLNGHTPP 218
Query: 196 GASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTA 254
G++EPITVKFA +P +A + + +Q M H R FG P+HH A RF+F+P++
Sbjct: 219 GSAEPITVKFAANPN---QARNSQMMSQ---MYH--GQSRRFGGPVHHQAQRFRFSPMST 270
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
D ++ S WCIF+YNL E ++ +LWQ+FGPFGAV NVKV+RD T KCKG
Sbjct: 271 DHMSGGGGASGSSSSG-WCIFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKG 329
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGFV M NY+EA AI SLNGY LGD++LQVSFKT K
Sbjct: 330 FGFVTMANYEEAAMAIHSLNGYRLGDKVLQVSFKTSK 366
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 221/319 (69%), Gaps = 31/319 (9%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAE+AI LNGL+LQ+K+
Sbjct: 1 MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAINTLNGLRLQSKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L D+
Sbjct: 61 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG------ 114
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
+S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA +P
Sbjct: 115 ---------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-------- 157
Query: 218 ANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPPKSLHG---SGW 272
N N A + + + R FG P+HH A RF+F+P+ D + S L ++ G SGW
Sbjct: 158 -NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSGVNVPGNASSGW 214
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
CIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY+EA AI S
Sbjct: 215 CIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIAS 274
Query: 333 LNGYALGDRLLQVSFKTHK 351
LNGY LGD++LQVSFKT+K
Sbjct: 275 LNGYRLGDKILQVSFKTNK 293
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 74 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 133
Query: 85 IIELNGLK 92
I NG K
Sbjct: 134 ITSFNGHK 141
>gi|312380126|gb|EFR26210.1| hypothetical protein AND_07855 [Anopheles darlingi]
Length = 388
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 183/349 (52%), Positives = 229/349 (65%), Gaps = 64/349 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT-------AQSLGYGFVNYYRTE 79
+NLIVNY+PQTMT+EE++ LFSSVGEVES KL+RDK QSLGYGFVNY+R +
Sbjct: 78 TNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHRPQ 137
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DAE+A+ LNGL+LQNK +KVS+ARPSSE IK ANLY+SGLPK +TQE+LE P G
Sbjct: 138 DAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTITQEELETTLPPEGN- 196
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
DK KG+GF+RF+Q EAE A+Q LNGT P+G ++
Sbjct: 197 -------DK-------------------PKGVGFIRFDQRKEAERAIQALNGTTPKGLTD 230
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNP--------LHH---SARFK 248
PITVKF+N+P Q AA + A+ F NP +HH +
Sbjct: 231 PITVKFSNTPG------------QNAAAKVVQPALPAFLNPQLTRRLGAIHHPINKGLAR 278
Query: 249 FAPLTADLLNNSMLPPKSLHG------SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
F+P+ ++L+ MLP +G GW IF+YNLAPETE+N LWQLFGPFGAVQNVK
Sbjct: 279 FSPMGGEVLD-MMLPAAPSNGLNVAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNVK 337
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V++D T +CKG+GFV MTNY+EA+ AI+SLNGY LG R+LQVSFKT+K
Sbjct: 338 VIKDAATNQCKGYGFVTMTNYEEAMLAIRSLNGYTLGQRVLQVSFKTNK 386
>gi|444525484|gb|ELV14031.1| ELAV-like protein 3 [Tupaia chinensis]
Length = 332
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/330 (52%), Positives = 220/330 (66%), Gaps = 39/330 (11%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 86 DKAISTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 146 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 190
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNS 260
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 191 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 242
Query: 261 MLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+R
Sbjct: 243 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 302
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
D T KCKGFGFV MTNYDEA AI SL+G
Sbjct: 303 DFTTNKCKGFGFVTMTNYDEAAMAIASLHG 332
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 110 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 169
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 170 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 229
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 230 RLDNLLNMAYGVKRFSPIAIDGMS 253
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D LFG G +++ K+VRD T + G+GFV ++ ++A AI +
Sbjct: 33 LIVNYLPQNMTQDE-FKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAIST 91
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 92 LNGLKLQTKTIKVSY 106
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 227/347 (65%), Gaps = 53/347 (15%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+G QSLGYGFVNY +D
Sbjct: 40 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIG--------------QSLGYGFVNYIDPKD 85
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 86 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 145
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 146 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 190
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFK----------- 248
ITVKFAN+P+ QA + + + R + PL A RF+
Sbjct: 191 ITVKFANNPSQNPN--------QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 242
Query: 249 ---FAPLTADLLNNSMLPPKSLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
F+P+T D + + H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+
Sbjct: 243 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 302
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 303 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 349
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 111 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 170
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 171 EAEEAIKGLNGQK 183
>gi|349931692|dbj|GAA40288.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 941
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/387 (50%), Positives = 242/387 (62%), Gaps = 71/387 (18%)
Query: 18 YQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYR 77
Y D N +NLIVNY+P M+QEE++ LFSS+GEVESCKL+R+K T +SLGY FV Y R
Sbjct: 354 YAGD-NANKTNLIVNYLPPFMSQEEVKALFSSIGEVESCKLVREKATGESLGYAFVKYIR 412
Query: 78 TEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAE+AI LNGL+LQNK+IKVS ARPSSE+IK ANLY+ GLPK MTQ +LE+LF+ G
Sbjct: 413 AADAEKAIRTLNGLRLQNKTIKVSLARPSSESIKGANLYICGLPKKMTQTELEDLFKQCG 472
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-----T 192
IIT+RIL D +S+G+ F+RF+Q EAE A++ LNG
Sbjct: 473 RIITARILYDNKTG---------------LSRGVAFIRFDQRHEAELAIRRLNGYQAPPE 517
Query: 193 IPEGA-SEPITVKFANSPAG-RAKALAANLNAQAAAMRHFAAAM---------------- 234
P G SEPITVKFANSP R +L+ L QAA ++ AA++
Sbjct: 518 HPNGVPSEPITVKFANSPNSIRHDSLSLALLKQAAQLQSVAASVVTPPSRTAATAAATAV 577
Query: 235 --RHFGNPLHH----SARFKFA-PLT----------ADLLN---------NSMLPPK--- 265
NPL S R K++ LT AD L N +L P
Sbjct: 578 AAAGLLNPLQQIASISNRLKYSNALTGGAGSPGSTPADFLPAMASAAAVVNPLLAPAVAA 637
Query: 266 ---SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
+L +GWCIFVYNLAPETE+ LWQLFGPFGAVQ VK++RDP + KCKGFGFV M+N
Sbjct: 638 SSGALTATGWCIFVYNLAPETEEANLWQLFGPFGAVQTVKIIRDPTSNKCKGFGFVTMSN 697
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKT 349
Y+EA+ AI SLNG+ALG+R+LQVSFKT
Sbjct: 698 YEEALLAIHSLNGFALGNRVLQVSFKT 724
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V++ K+IRD T+ + G+GFV E+A AI L
Sbjct: 650 FVYNLAPET-EEANLWQLFGPFGAVQTVKIIRDPTSNKCKGFGFVTMSNYEEALLAIHSL 708
Query: 89 NGLKLQNKSIKVSYA-------RPSS 107
NG L N+ ++VS+ RPSS
Sbjct: 709 NGFALGNRVLQVSFKTTPNSKLRPSS 734
>gi|389612935|dbj|BAM19862.1| RNA-binding protein [Papilio xuthus]
Length = 360
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 191/371 (51%), Positives = 242/371 (65%), Gaps = 34/371 (9%)
Query: 1 MMKHEEMYNTTQ--SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKL 58
MM + + N Q + S Q NE +NLIVNY+PQTMTQEE++ LFSSVGEVESCKL
Sbjct: 1 MMTNIDSMNVNQPTQNGSKLQPCNNESKTNLIVNYLPQTMTQEEIRSLFSSVGEVESCKL 60
Query: 59 IRDKTT--------AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAI 110
IRDK T QSLGY FVNY++ EDAE+A+ LNGL+LQNK IKVSYARPSS+AI
Sbjct: 61 IRDKVTVFPDHILNGQSLGYAFVNYHKAEDAEKAVNTLNGLRLQNKVIKVSYARPSSDAI 120
Query: 111 KRANLYVSGLPK-HMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI-- 167
K ANLYVSGLP+ + T E L + RIL + ++ V + G E I
Sbjct: 121 KGANLYVSGLPQTYDTARPGEALQPLWDRSSAPRILHENVS---VGHLLQGGVEDQSIQG 177
Query: 168 -SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAA 226
S+G+ F+R++Q EAE A++ELNGTIP G + P+TVK AN+P+ + K LA A
Sbjct: 178 PSRGVAFIRYDQRCEAEAAIRELNGTIPPGGTGPMTVKCANNPSNQTKGLAP------LA 231
Query: 227 MRHFAAAMRHFGNPLHHS------ARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLA 280
+ R F P + +F+PL ++ + +L GSGWCIFVYN+
Sbjct: 232 AYLTPNSTRRFVGPAGKALLAINKGLQRFSPLADPIIQGN-----ALGGSGWCIFVYNIG 286
Query: 281 PETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
+TE++ LWQLFGPFGAVQ VK++RDP T KCKG+GFV MTNYDEAV AIQSLNGY+L
Sbjct: 287 ADTEESTLWQLFGPFGAVQCVKIIRDPTTNKCKGYGFVTMTNYDEAVVAIQSLNGYSLNG 346
Query: 341 RLLQVSFKTHK 351
++LQVSFKT+K
Sbjct: 347 QVLQVSFKTNK 357
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 40 QEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIK 99
+ L LF G V+ K+IRD TT + GYGFV ++A AI LNG L + ++
Sbjct: 291 ESTLWQLFGPFGAVQCVKIIRDPTTNKCKGYGFVTMTNYDEAVVAIQSLNGYSLNGQVLQ 350
Query: 100 VSYARPSSEA 109
VS+ S++
Sbjct: 351 VSFKTNKSKS 360
>gi|115666403|ref|XP_802063.2| PREDICTED: ELAV-like protein 2-like isoform 7 [Strongylocentrotus
purpuratus]
Length = 367
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 228/342 (66%), Gaps = 26/342 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ M Q+E++ LF GE+ESCKL+RDK T QSLGYGFVNY + DA +
Sbjct: 35 DSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQSLGYGFVNYLKPADALK 94
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
A+ LNGL+LQ K+IKVS+ARPSS+AIK ANLY+SG+PKH Q DL+NLF +G II SR
Sbjct: 95 AVKTLNGLRLQCKTIKVSFARPSSQAIKDANLYISGIPKHYGQLDLDNLFNAFGRIICSR 154
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D E SG P +G+GFVR+++ EAE A++ LNG IP G +P+ V
Sbjct: 155 LLLDHECGE------SGRP------RGVGFVRYDRRCEAEKAIEGLNGNIPHGGKDPLIV 202
Query: 204 KFANSPAGRAKA-----------LAANLNAQAAAMRHFAAAMRHFGNPLHHSAR-FKFAP 251
KFAN+P + ++ L+ + A ++F P+ H A F+F P
Sbjct: 203 KFANNPGQHYQKCLQQMYQQMPIISPTLSPRRVGGPVSAGGSQNFIGPMRHMAHCFRFNP 262
Query: 252 LT-ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
+T +D++++ L + +G GWCIFVYNL + ED +LWQLFGP+GAV NVKVVRD
Sbjct: 263 MTSSDVISHMNLQAMTNNGQGWCIFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQ 322
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYAL-GDRLLQVSFKTHK 351
+CKG+GFV M NYDEA+ AI +LNGY L G R LQVSFK+ K
Sbjct: 323 RCKGYGFVNMLNYDEALSAINTLNGYQLNGKRTLQVSFKSSK 364
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
SH + N Q + V +P L LF G V + K++RD+ + GYGF
Sbjct: 270 SHMNLQAMTNNGQGWCIFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGF 329
Query: 73 VNYYRTEDAERAIIELNGLKLQNK-SIKVSY 102
VN ++A AI LNG +L K +++VS+
Sbjct: 330 VNMLNYDEALSAINTLNGYQLNGKRTLQVSF 360
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 230/338 (68%), Gaps = 30/338 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLI+NY+PQ+MT+EEL+ LF+ VG+++SCKL+RD+ T QSLGYGF++Y DAE
Sbjct: 499 SDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFIDYVHPRDAE 558
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RA+ LNGL+ K+IKVSYARP+S +I+ ANLY++GLPK+MTQ++LE+LF PYG IITS
Sbjct: 559 RAVCLLNGLQCPPKTIKVSYARPNSSSIRDANLYINGLPKNMTQKELEHLFSPYGHIITS 618
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL DK SGT S+G+GF+RFN EAE A++ LNG P G EP+
Sbjct: 619 RILTDK---------ASGT------SRGVGFIRFNMKSEAEEAIKALNGQKPCGILEPLV 663
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRH--FAAAMRHFG---NPLHHSARFKFAPLTA--- 254
V+FA++ + + N Q H R G P+ A P T
Sbjct: 664 VRFAHN---QTQVTPQNPLCQLPHSSHGPLPPQPRRSGLNNTPIPTRAAQNLTPSTTENT 720
Query: 255 -DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
DL+ + P +++ +GWCIF+YNLAP++++N+LWQLFGPFGAV NVK++RD T KCK
Sbjct: 721 RDLVGVT-FPGQTV--TGWCIFIYNLAPDSDENILWQLFGPFGAVSNVKIIRDFNTNKCK 777
Query: 314 GFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGFV MT+Y+EA AI SLNGY LG R+LQVSFKT+K
Sbjct: 778 RFGFVTMTSYNEAALAIASLNGYCLGGRVLQVSFKTNK 815
>gi|351694381|gb|EHA97299.1| ELAV-like protein 3, partial [Heterocephalus glaber]
Length = 344
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 171/337 (50%), Positives = 222/337 (65%), Gaps = 46/337 (13%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 31 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 90
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 91 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 150
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 151 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 195
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF------------- 247
+FAN+P+ + QA + ++ R + PLHH + RF
Sbjct: 196 PGEFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVK 247
Query: 248 -------KFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAV 298
+F+P+ D ++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV
Sbjct: 248 SPLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAV 307
Query: 299 QNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
NVKV+RD T KCKGFGFV MTNYDEA AI SLNG
Sbjct: 308 TNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 344
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 115 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 174
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 175 EAEEAIKGLNGQK 187
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV ++ ++A AI +LNG L + ++VS+
Sbjct: 55 LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 111
>gi|410053240|ref|XP_003316137.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Pan
troglodytes]
Length = 447
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/332 (52%), Positives = 221/332 (66%), Gaps = 40/332 (12%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T SLG FV Y + A
Sbjct: 150 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGVSLGXRFVKYSDPKKA 209
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI L GLKLQ K+I+VSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 210 DKAINTLQGLKLQTKTIQVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 269
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+E I
Sbjct: 270 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAESI 314
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN-- 259
TVKFAN+ R AL PL AR F+P+ D ++
Sbjct: 315 TVKFANNQVRRRAALL---------------------TPLSLIAR--FSPIAIDGMSGLA 351
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 352 GVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT 411
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 412 MTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 443
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 56/211 (26%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 234 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 293
Query: 80 DAERAIIELNGLKLQN--KSIKVSYARPSSEAIKRANL---------------------- 115
+AE AI LNG K +SI V +A +++ +RA L
Sbjct: 294 EAEEAIKGLNGQKPLGAAESITVKFA--NNQVRRRAALLTPLSLIARFSPIAIDGMSGLA 351
Query: 116 ---------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSG 160
+V L + L LF P+G + ++ +R F +
Sbjct: 352 GVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV---------IRDFTTN 402
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
KG GFV + EA A+ LNG
Sbjct: 403 K------CKGFGFVTMTNYDEAAMAIASLNG 427
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/386 (48%), Positives = 234/386 (60%), Gaps = 82/386 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 140 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Query: 207 ----------------NSPAGR-----------------AKALAANL------------- 220
+SPA R LAA +
Sbjct: 185 ANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFSLSILKMGLAARMKWDRGDESQGLGL 244
Query: 221 ---------NAQAAAMRHFAAAMRHFGNP---LHHSARFKFAPLTADLLNNSMLPPKSLH 268
N++ ++R A R N L SARF +P+ D + S L ++
Sbjct: 245 QDLVCCCLRNSRGLSVR--AVLFRSSRNDIEGLSQSARF--SPMGVDHM--SGLSGVNVP 298
Query: 269 G---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY+E
Sbjct: 299 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 358
Query: 326 AVFAIQSLNGYALGDRLLQVSFKTHK 351
A AI SLNGY LGD++LQVSFKT+K
Sbjct: 359 AAMAIASLNGYRLGDKILQVSFKTNK 384
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
Query: 85 IIELNGLK 92
I NG K
Sbjct: 164 ITSFNGHK 171
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL--------------- 61
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
>gi|338727192|ref|XP_001916382.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Equus
caballus]
Length = 345
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/321 (51%), Positives = 217/321 (67%), Gaps = 41/321 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA+
Sbjct: 38 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 97
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITS
Sbjct: 98 KAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 157
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPIT
Sbjct: 158 RILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 202
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARF-------------- 247
VKFAN+P+ + QA + ++ R +G P+H+ + RF
Sbjct: 203 VKFANNPSQKT--------GQALLTHLYQSSARRYGGPVHNQTQRFRVKLDNLLNMAYGV 254
Query: 248 -KFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
+F+P+ D ++ + G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+
Sbjct: 255 KRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVI 314
Query: 305 RDPQTYKCKGFGFVCMTNYDE 325
RD T KCKGF FV MTNYDE
Sbjct: 315 RDFTTNKCKGFDFVTMTNYDE 335
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 121 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 180
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS-----GLPKH-MTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G P H TQ
Sbjct: 181 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYGGPVHNQTQRF 240
Query: 128 --DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M+
Sbjct: 241 RVKLDNLLNMAYGVKRFSPIAIDGMSG 267
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV ++ ++A AI +LNG L + ++VS+
Sbjct: 61 LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 117
>gi|312370698|gb|EFR19033.1| hypothetical protein AND_23174 [Anopheles darlingi]
Length = 468
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/331 (52%), Positives = 208/331 (62%), Gaps = 79/331 (23%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEE++ LFSS+GEVESCKLIRDK T
Sbjct: 210 DSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTG------------------ 251
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ANLYVSGLPK+M Q DLE LF P+G IITSR
Sbjct: 252 -----------------------------ANLYVSGLPKNMLQADLEALFSPFGRIITSR 282
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
ILCD + +SKG+GF+RF+Q +EAE A++ELNGT+P+G++EPITV
Sbjct: 283 ILCDNITG---------------LSKGVGFIRFDQRMEAEKAIKELNGTVPKGSTEPITV 327
Query: 204 KFANSPAGRAKA--LAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
KFAN+P+ LAA L QAA F PL DLL NSM
Sbjct: 328 KFANNPSSTKTVPPLAAYLGPQAARPVPFQT--------------IDTRPLAGDLLANSM 373
Query: 262 LPPKSL-HGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
+P ++ +GSGWCIFVYNLAPETE+NVLWQLFGPFGAVQ+VKV++D QT KCKGFGFV M
Sbjct: 374 IPTNAIANGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTM 433
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
TNYDEAV AIQSLNGY LG+R+LQVSFKT+K
Sbjct: 434 TNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 464
>gi|390360288|ref|XP_003729672.1| PREDICTED: ELAV-like protein 2-like [Strongylocentrotus purpuratus]
Length = 385
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/363 (47%), Positives = 222/363 (61%), Gaps = 50/363 (13%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ M Q+E++ LF GE+ESCKL+RDK T QSLGYGFVNY + DA +
Sbjct: 35 DSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQSLGYGFVNYLKPADALK 94
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
A+ LNGL+LQ K+IKVS+ARPSS+AIK ANLY+SG+PKH Q DL+NLF +G II SR
Sbjct: 95 AVKTLNGLRLQCKTIKVSFARPSSQAIKDANLYISGIPKHYGQLDLDNLFNAFGRIICSR 154
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L D G P +G+GFVR+++ EAE A++ LNG IP G +P+ V
Sbjct: 155 LLLDHEC---------GRP------RGVGFVRYDRRCEAEKAIEGLNGNIPHGGKDPLIV 199
Query: 204 KFANSPAGRAKALAANLNAQ------------------AAAMRHFAAAMRHFGNPLHHS- 244
KFAN+P + + Q A ++F MRH +
Sbjct: 200 KFANNPGQHYQKCLQQMYQQMPIISPTLSPRRVGGPVSAGGSQNFIGPMRHMAHCFRWQK 259
Query: 245 --------------ARFKFAPLT-ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLW 289
F F P+T +D++++ L + +G GWCIFVYNL + ED +LW
Sbjct: 260 MGSKMQGLIGKLLPKNFMFNPMTSSDVISHMNLQAMTNNGQGWCIFVYNLPADCEDGLLW 319
Query: 290 QLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL-GDRLLQVSFK 348
QLFGP+GAV NVKVVRD +CKG+GFV M NYDEA+ AI +LNGY L G R LQVSFK
Sbjct: 320 QLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTLNGYQLNGKRTLQVSFK 379
Query: 349 THK 351
+ K
Sbjct: 380 SSK 382
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
SH + N Q + V +P L LF G V + K++RD+ + GYGF
Sbjct: 288 SHMNLQAMTNNGQGWCIFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGF 347
Query: 73 VNYYRTEDAERAIIELNGLKLQNK-SIKVSY 102
VN ++A AI LNG +L K +++VS+
Sbjct: 348 VNMLNYDEALSAINTLNGYQLNGKRTLQVSF 378
>gi|339246059|ref|XP_003374663.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972148|gb|EFV55839.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/332 (51%), Positives = 219/332 (65%), Gaps = 33/332 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D ++ +NLIVNY+PQ+MT EE + LF S+GEVE+ KL+RDK T QSLGYGF+NY E
Sbjct: 12 NDSIDRKTNLIVNYLPQSMTTEEFRMLFDSIGEVETAKLVRDKVTGQSLGYGFINYVNPE 71
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
A +AI LNGL LQ+K +KVSYARPSSE+IK ANLY+SGLP T ++LE LF P+G I
Sbjct: 72 SAAKAIERLNGLGLQSKKMKVSYARPSSESIKGANLYISGLPDAYTVKELEELFSPFGRI 131
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITSRIL D ISKG+GFVR+++ EA+ A+ +LN TIP G +E
Sbjct: 132 ITSRILVDNATG---------------ISKGVGFVRYDKKGEADAAIAKLNSTIPPGGTE 176
Query: 200 PITVKFANSPAGRAKALAANLNAQAA---------AMRHFAAAMRHFGNPLHHSA---RF 247
PI VKFANSP+ A ++ A A + A R F P+HH+A RF
Sbjct: 177 PIVVKFANSPSSSNHRAAIHVAQAAQAALAAQVPLAFWNAGATARRFQGPIHHTAAANRF 236
Query: 248 KFAPLTAD------LLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
+++PL D L + + P++ +G+ IFVYNLAPE E++ LWQLFGPFGAV NV
Sbjct: 237 RYSPLGTDLLAGSLLSAAAAMAPQNNSATGFSIFVYNLAPEVEESKLWQLFGPFGAVLNV 296
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
KV+RD QT KCKG+GFV MTNYDEA+ AI +
Sbjct: 297 KVIRDMQTNKCKGYGFVTMTNYDEALAAISMI 328
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ-LFGPFGAVQNVKVVRDPQT 309
P+ +LLN+S+ +L + N P++ ++ LF G V+ K+VRD T
Sbjct: 5 PMKEELLNDSIDRKTNL--------IVNYLPQSMTTEEFRMLFDSIGEVETAKLVRDKVT 56
Query: 310 YKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ G+GF+ N + A AI+ LNG L + ++VS+
Sbjct: 57 GQSLGYGFINYVNPESAAKAIERLNGLGLQSKKMKVSY 94
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/326 (49%), Positives = 218/326 (66%), Gaps = 33/326 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
SNLIVNY+PQ+MTQ+E+Q LFSS G+V SCKL+RDK + SLGY FV Y DA +AI
Sbjct: 8 SNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHHSLGYAFVKYEDVADANKAIS 67
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K IKVSYARPSS AIK ANLYVSGLP H T +DL+NLF YG IITS++L
Sbjct: 68 SLNGLRLQSKVIKVSYARPSSAAIKNANLYVSGLPLHYTHQDLDNLFGQYGAIITSKVLY 127
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D +S+G+GFVR+++ EAE A+ LN T+P G +TVKFA
Sbjct: 128 DGNG----------------VSRGVGFVRYDKRNEAEAAILALNKTLPNGFQAQLTVKFA 171
Query: 207 NSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL-HHSARFKFAPLTADLLNNSMLPPK 265
N+P N +Q++ + + +G P+ H S+ +++P+ A N+S P
Sbjct: 172 NTP---------NQKSQSSENSDYTDIQQSYGGPMRHQSSSVRYSPMAA---NDS---PA 216
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
+ + + WCIF+YNL + ED++L+QLF P+GA+ NVK++R+ + KCKG+GFV M NY+E
Sbjct: 217 NSNSNNWCIFIYNLPQDAEDSLLYQLFAPYGAINNVKLIRELNSKKCKGYGFVNMVNYEE 276
Query: 326 AVFAIQSLNGYALGD-RLLQVSFKTH 350
A AI LNGY +G+ RLLQVSFK +
Sbjct: 277 AYNAILHLNGYDVGENRLLQVSFKNN 302
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
++ N N + + +PQ L LF+ G + + KLIR+ + + GYGFVN E
Sbjct: 216 ANSNSNNWCIFIYNLPQDAEDSLLYQLFAPYGAINNVKLIRELNSKKCKGYGFVNMVNYE 275
Query: 80 DAERAIIELNGLKL-QNKSIKVSYARPSSEAIKR 112
+A AI+ LNG + +N+ ++VS+ S + R
Sbjct: 276 EAYNAILHLNGYDVGENRLLQVSFKNNSKKTSNR 309
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 74/228 (32%)
Query: 107 SEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQ 166
+E I ++NL V+ LP+ MTQ+++++LF G +I+ +++ DK +
Sbjct: 2 AEKIDQSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHH-------------- 47
Query: 167 ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAA 226
S G FV++ +A A+ LNG + S+ I V +A P+ +AA
Sbjct: 48 -SLGYAFVKYEDVADANKAISSLNGLRLQ--SKVIKVSYA-RPS-------------SAA 90
Query: 227 MRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDN 286
+++ A + G PLH++ + DL N
Sbjct: 91 IKN--ANLYVSGLPLHYTHQ--------DLDN---------------------------- 112
Query: 287 VLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
LFG +GA+ KV+ D +G GFV +EA AI +LN
Sbjct: 113 ----LFGQYGAIITSKVLYDGNGV-SRGVGFVRYDKRNEAEAAILALN 155
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 92/228 (40%), Gaps = 61/228 (26%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+N+NL V+ +P T ++L +LF G + + K++ D S G GFV Y + +AE A
Sbjct: 92 KNANLYVSGLPLHYTHQDLDNLFGQYGAIITSKVLYDGNGV-SRGVGFVRYDKRNEAEAA 150
Query: 85 IIEL-----NGLKLQ----------NKS----------IKVSYARP-------------- 105
I+ L NG + Q KS I+ SY P
Sbjct: 151 ILALNKTLPNGFQAQLTVKFANTPNQKSQSSENSDYTDIQQSYGGPMRHQSSSVRYSPMA 210
Query: 106 --SSEAIKRAN---LYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSG 160
S A +N +++ LP+ L LF PYG I ++ +R S
Sbjct: 211 ANDSPANSNSNNWCIFIYNLPQDAEDSLLYQLFAPYGAINNVKL---------IRELNS- 260
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANS 208
+ KG GFV + EA +A+ LNG G + + V F N+
Sbjct: 261 -----KKCKGYGFVNMVNYEEAYNAILHLNG-YDVGENRLLQVSFKNN 302
>gi|198285433|gb|ACH85255.1| embryonic lethal abnormal vision like 1 [Salmo salar]
Length = 273
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/292 (53%), Positives = 203/292 (69%), Gaps = 25/292 (8%)
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP 121
K + SLGYGFVNY DAERAI LNGL+LQ+K+IKVS+ARPSS+ IK ANLY+SGLP
Sbjct: 1 KNQSHSLGYGFVNYVNASDAERAINTLNGLRLQSKTIKVSFARPSSDGIKDANLYISGLP 60
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIE 181
K MTQ+D+E++F YG II SR+L D+ + +S+G+ F+RF++ E
Sbjct: 61 KTMTQKDVEDMFTRYGRIINSRVLVDQASG---------------LSRGVAFIRFDKRAE 105
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
AE A+++LNG P GASEPITVKFA SP +AK N+Q + R FG P+
Sbjct: 106 AEDAIKDLNGQKPPGASEPITVKFAASP-NQAK------NSQLINQLYHNQG-RRFGGPV 157
Query: 242 HHSA-RFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
HH A RF+F+P++ D ++ S + + +GWCIF+YNL + ++ +LWQ+FGPFGAV
Sbjct: 158 HHQAQRFRFSPMSVDHMSGMSTVSAQGNSTAGWCIFIYNLGQDADEGILWQMFGPFGAVT 217
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
NVKV+RD T KCKGFGFV MTNY+EA AI SLNGY +GD++LQVSFKT K
Sbjct: 218 NVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDKILQVSFKTSK 269
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +F+ G + + +++ D+ + S G F+ + + +AE A
Sbjct: 50 KDANLYISGLPKTMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDA 109
Query: 85 IIELNGLKLQNKS--IKVSYARPSSEA 109
I +LNG K S I V +A ++A
Sbjct: 110 IKDLNGQKPPGASEPITVKFAASPNQA 136
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV E+A AI LNG ++ +K ++VS+
Sbjct: 206 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDKILQVSF 265
>gi|432099588|gb|ELK28729.1| ELAV-like protein 4 [Myotis davidii]
Length = 405
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/289 (54%), Positives = 198/289 (68%), Gaps = 29/289 (10%)
Query: 64 TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKH 123
T QSLGYGFVNY DA++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK
Sbjct: 141 TGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKT 200
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
M+Q+++E LF YG IITSRIL D ++ +S+G+GF+RF++ IEAE
Sbjct: 201 MSQKEMEQLFSQYGRIITSRILVD---------------QVTGVSRGVGFIRFDKRIEAE 245
Query: 184 HAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
A++ LNG P GA+EPITVKFAN+P+ + QA + ++ R + PLHH
Sbjct: 246 EAIKGLNGQKPLGATEPITVKFANNPSQK--------TGQALLTHLYQSSARRYAGPLHH 297
Query: 244 -SARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ RF+F+P+ D ++ IFVYNL+PE +++VLWQLFGPFGAV NVK
Sbjct: 298 QTQRFRFSPIAIDGMSGLXXXXXXXX-----IFVYNLSPEADESVLWQLFGPFGAVTNVK 352
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 353 VIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 401
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 61/218 (27%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 183 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 242
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA------------------------ 113
+AE AI LNG K + I V +A S+ +A
Sbjct: 243 EAEEAIKGLNGQKPLGATEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 302
Query: 114 --------------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASEN 153
++V L + L LF P+G + ++
Sbjct: 303 RFSPIAIDGMSGLXXXXXXXXIFVYNLSPEADESVLWQLFGPFGAVTNVKV--------- 353
Query: 154 VRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+R F + KG GFV + EA A+ LNG
Sbjct: 354 IRDFTTNK------CKGFGFVTMTNYDEAAMAIASLNG 385
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 325 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 383
Query: 89 NGLKLQNKSIKVSY 102
NG +L + ++VS+
Sbjct: 384 NGYRLGERVLQVSF 397
>gi|326934269|ref|XP_003213214.1| PREDICTED: ELAV-like protein 1-like [Meleagris gallopavo]
Length = 298
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 199/295 (67%), Gaps = 31/295 (10%)
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP 121
+T SLGYGFVNY +DAERAI LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP
Sbjct: 27 QTPGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLP 86
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIE 181
+ MTQ+D+E++F +G II SR+L D+ +S+G+ F+RF++ E
Sbjct: 87 RSMTQKDVEDMFSRFGRIINSRVLVDQTTG---------------LSRGVAFIRFDKRSE 131
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA-AAMRHFGNP 240
AE A+ NG P G+SEPITVKFA +P N N A + + R FG P
Sbjct: 132 AEEAITNFNGHKPPGSSEPITVKFAANP---------NQNKNVALLSQLCHSPARRFGGP 182
Query: 241 LHHSA-RFKFAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFG 296
+HH A RF+F+P+ D + S L ++ G SGWCIF+YNL + ++ +LWQ+FGPFG
Sbjct: 183 VHHQAQRFRFSPMGVDHM--SGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFG 240
Query: 297 AVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
AV NVKV+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 241 AVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 295
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P++MTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 76 KDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 135
Query: 85 IIELNGLK 92
I NG K
Sbjct: 136 ITNFNGHK 143
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV E+A AI LNG +L +K ++VS+
Sbjct: 232 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 291
>gi|226875175|gb|ACO88935.1| Elav [Octopus bimaculoides]
Length = 283
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 165/304 (54%), Positives = 200/304 (65%), Gaps = 61/304 (20%)
Query: 31 VNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA------------------------- 65
VNYVPQTMTQEE++ LF+S+GEVESCKLIRDK TA
Sbjct: 1 VNYVPQTMTQEEIRSLFASIGEVESCKLIRDKPTAMNTLRQNDLDQGLPETANTDFHCDL 60
Query: 66 --------------QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIK 111
QSLGYGFVNY DAE+AI LNGL+LQNK+IKVSYARPSSE+IK
Sbjct: 61 LPAARNASTDAEKCQSLGYGFVNYKYPSDAEKAINTLNGLRLQNKTIKVSYARPSSESIK 120
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
ANLY+SGLPK TQ DLE LF G IITSRIL D +SKG+
Sbjct: 121 GANLYISGLPKSFTQLDLEKLFSQCGFIITSRILYDNNTG---------------LSKGV 165
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
GF+RF+Q IEAE A+Q+L+GTIPEGA+EPITVKFANSP+ A+ A A + +
Sbjct: 166 GFIRFDQRIEAERAIQKLHGTIPEGATEPITVKFANSPSSNKNAVPL-----ALAASYLS 220
Query: 232 AAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
+ R FG P+HH+A RF+++PL A LL ++LP +L+G+GWCIFVYNLAP+TED+VLW+
Sbjct: 221 PSRRIFG-PIHHAAGRFRYSPLEASLLPGTILPGNALNGTGWCIFVYNLAPDTEDDVLWR 279
Query: 291 LFGP 294
LFGP
Sbjct: 280 LFGP 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL ++ +P++ TQ +L+ LFS G + + +++ D T S G GF+ + + +AERA
Sbjct: 120 KGANLYISGLPKSFTQLDLEKLFSQCGFIITSRILYDNNTGLSKGVGFIRFDQRIEAERA 179
Query: 85 IIELNG 90
I +L+G
Sbjct: 180 IQKLHG 185
>gi|124388985|gb|ABN10621.1| elav [Drosophila recens]
Length = 401
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 215
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 216 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 261
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 262 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 316
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 317 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 374
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 375 FGAVQSVKIVKDPTTNQCKGYGFVSMT 401
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 101 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 160
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 161 VRPQDAEQAVNVLNGLRLQNKTIKVSF 187
>gi|124388947|gb|ABN10602.1| elav [Drosophila recens]
gi|124388971|gb|ABN10614.1| elav [Drosophila recens]
gi|124389005|gb|ABN10631.1| elav [Drosophila recens]
gi|124389007|gb|ABN10632.1| elav [Drosophila recens]
gi|124389009|gb|ABN10633.1| elav [Drosophila recens]
gi|124389011|gb|ABN10634.1| elav [Drosophila recens]
gi|124389013|gb|ABN10635.1| elav [Drosophila recens]
gi|124389015|gb|ABN10636.1| elav [Drosophila recens]
gi|124389017|gb|ABN10637.1| elav [Drosophila recens]
gi|124389019|gb|ABN10638.1| elav [Drosophila recens]
gi|124389021|gb|ABN10639.1| elav [Drosophila recens]
gi|124389023|gb|ABN10640.1| elav [Drosophila recens]
gi|124389025|gb|ABN10641.1| elav [Drosophila recens]
gi|124389027|gb|ABN10642.1| elav [Drosophila recens]
gi|124389029|gb|ABN10643.1| elav [Drosophila recens]
gi|124389031|gb|ABN10644.1| elav [Drosophila recens]
Length = 401
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 215
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 216 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 261
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 262 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 316
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 317 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 374
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 375 FGAVQSVKIVKDPTTNQCKGYGFVSMT 401
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 101 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 160
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 161 VRPQDAEQAVNVLNGLRLQNKTIKVSF 187
>gi|124388951|gb|ABN10604.1| elav [Drosophila recens]
Length = 400
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 95 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 154
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 155 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 214
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 215 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 260
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 261 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 315
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 316 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 373
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 374 FGAVQSVKIVKDPTTNQCKGYGFVSMT 400
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 100 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 159
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 160 VRPQDAEQAVNVLNGLRLQNKTIKVSF 186
>gi|124388979|gb|ABN10618.1| elav [Drosophila recens]
gi|124388981|gb|ABN10619.1| elav [Drosophila recens]
gi|124389003|gb|ABN10630.1| elav [Drosophila recens]
Length = 401
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 215
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 216 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 261
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 262 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 316
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 317 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 374
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 375 FGAVQSVKIVKDPTTNQCKGYGFVSMT 401
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 101 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 160
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 161 VRPQDAEQAVNVLNGLRLQNKTIKVSF 187
>gi|124388963|gb|ABN10610.1| elav [Drosophila recens]
Length = 400
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 95 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 154
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 155 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 214
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 215 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 260
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 261 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 315
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 316 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 373
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 374 FGAVQSVKIVKDPTTNQCKGYGFVSMT 400
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 100 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 159
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 160 VRPQDAEQAVNVLNGLRLQNKTIKVSF 186
>gi|124388957|gb|ABN10607.1| elav [Drosophila recens]
gi|124388977|gb|ABN10617.1| elav [Drosophila recens]
gi|124388991|gb|ABN10624.1| elav [Drosophila recens]
Length = 403
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 98 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 157
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 158 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 217
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 218 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 263
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 264 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 318
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 319 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 376
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 377 FGAVQSVKIVKDPTTNQCKGYGFVSMT 403
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 103 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 162
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 163 VRPQDAEQAVNVLNGLRLQNKTIKVSF 189
>gi|124388959|gb|ABN10608.1| elav [Drosophila recens]
Length = 398
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 93 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 152
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 153 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 212
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 213 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 258
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 259 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 313
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 314 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 371
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 372 FGAVQSVKIVKDPTTNQCKGYGFVSMT 398
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 98 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 157
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 158 VRPQDAEQAVNVLNGLRLQNKTIKVSF 184
>gi|124389033|gb|ABN10645.1| elav [Drosophila subquinaria]
Length = 405
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 100 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 159
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 160 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 219
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 220 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 265
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 266 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 320
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 321 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 378
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 379 FGAVQSVKIVKDPTTNQCKGYGFVSMT 405
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 105 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 164
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 165 VRPQDAEQAVNVLNGLRLQNKTIKVSF 191
>gi|124388953|gb|ABN10605.1| elav [Drosophila recens]
Length = 401
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 215
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 216 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 261
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 262 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 316
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 317 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 374
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 375 FGAVQSVKIVKDPTTNQCKGYGFVSMT 401
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 101 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 160
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 161 VRPQDAEQAVNVLNGLRLQNKTIKVSF 187
>gi|124388961|gb|ABN10609.1| elav [Drosophila recens]
Length = 400
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 95 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 154
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 155 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 214
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 215 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 260
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 261 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 315
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 316 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 373
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 374 FGAVQSVKIVKDPTTNQCKGYGFVSMT 400
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 100 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 159
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 160 VRPQDAEQAVNVLNGLRLQNKTIKVSF 186
>gi|124388983|gb|ABN10620.1| elav [Drosophila recens]
gi|124388999|gb|ABN10628.1| elav [Drosophila recens]
Length = 404
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 99 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 158
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 159 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 218
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 219 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 264
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 265 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 319
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 320 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 377
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 378 FGAVQSVKIVKDPTTNQCKGYGFVSMT 404
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 104 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 163
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 164 VRPQDAEQAVNVLNGLRLQNKTIKVSF 190
>gi|124388967|gb|ABN10612.1| elav [Drosophila recens]
gi|124388993|gb|ABN10625.1| elav [Drosophila recens]
Length = 399
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 94 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 153
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 154 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 213
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 214 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 259
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 260 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 314
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 315 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 372
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 373 FGAVQSVKIVKDPTTNQCKGYGFVSMT 399
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 99 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 158
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 159 VRPQDAEQAVNVLNGLRLQNKTIKVSF 185
>gi|124388997|gb|ABN10627.1| elav [Drosophila recens]
Length = 403
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 98 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 157
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 158 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 217
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 218 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 263
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 264 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 318
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 319 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 376
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 377 FGAVQSVKIVKDPTTNQCKGYGFVSMT 403
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 103 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 162
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 163 VRPQDAEQAVNVLNGLRLQNKTIKVSF 189
>gi|124388955|gb|ABN10606.1| elav [Drosophila recens]
gi|124388965|gb|ABN10611.1| elav [Drosophila recens]
gi|124388973|gb|ABN10615.1| elav [Drosophila recens]
Length = 397
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 92 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 151
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 152 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 211
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 212 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 257
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 258 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 312
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 313 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 370
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 371 FGAVQSVKIVKDPTTNQCKGYGFVSMT 397
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 97 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 156
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 157 VRPQDAEQAVNVLNGLRLQNKTIKVSF 183
>gi|124388987|gb|ABN10622.1| elav [Drosophila recens]
Length = 402
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 97 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 156
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 157 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 216
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 217 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 262
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 263 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 317
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 318 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 375
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 376 FGAVQSVKIVKDPTTNQCKGYGFVSMT 402
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 102 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 161
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 162 VRPQDAEQAVNVLNGLRLQNKTIKVSF 188
>gi|124388969|gb|ABN10613.1| elav [Drosophila recens]
gi|124388975|gb|ABN10616.1| elav [Drosophila recens]
gi|124388989|gb|ABN10623.1| elav [Drosophila recens]
gi|124389001|gb|ABN10629.1| elav [Drosophila recens]
Length = 402
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 97 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 156
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 157 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 216
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 217 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 262
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 263 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 317
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 318 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 375
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 376 FGAVQSVKIVKDPTTNQCKGYGFVSMT 402
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 102 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 161
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 162 VRPQDAEQAVNVLNGLRLQNKTIKVSF 188
>gi|124388949|gb|ABN10603.1| elav [Drosophila recens]
Length = 389
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 84 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 143
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 144 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 203
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 204 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 249
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 250 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 304
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 305 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 362
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 363 FGAVQSVKIVKDPTTNQCKGYGFVSMT 389
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 89 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 148
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 149 VRPQDAEQAVNVLNGLRLQNKTIKVSF 175
>gi|124388995|gb|ABN10626.1| elav [Drosophila recens]
Length = 403
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 214/327 (65%), Gaps = 50/327 (15%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 98 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 157
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 158 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 217
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 218 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 263
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
GT P ++PI VKF+N+P +K L A LN Q +R AM P++
Sbjct: 264 GTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--LVRRIGGAMH---TPVNKGLA 318
Query: 247 FKFAPLTADLLNNSMLP------------PKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+F+P+ D+L + MLP S G + IF+YNLAPETE+ LWQLFGP
Sbjct: 319 -RFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 376
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMT 321
FGAVQ+VK+V+DP T +CKG+GFV MT
Sbjct: 377 FGAVQSVKIVKDPTTNQCKGYGFVSMT 403
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 103 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 162
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 163 VRPQDAEQAVNVLNGLRLQNKTIKVSF 189
>gi|93115150|gb|ABE98247.1| ELAV-like [Oreochromis mossambicus]
Length = 283
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 208/306 (67%), Gaps = 29/306 (9%)
Query: 49 SVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE 108
SVGEVES KLIRDK SLGYGFVN+ DAERAI LNGL+LQ+K+IKVS+ARPSS+
Sbjct: 1 SVGEVESAKLIRDKVAGHSLGYGFVNFVNASDAERAISTLNGLRLQSKTIKVSFARPSSD 60
Query: 109 AIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQIS 168
AIK ANLY+SGLP+ ++Q+D+E++F YG II SR+L D+ + +S
Sbjct: 61 AIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASG---------------LS 105
Query: 169 KGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+G+ F+RF++ EA+ A++ LNG P G++EPITVKFA +P +A + + +Q M
Sbjct: 106 RGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFAANP---NQARNSQMMSQ---MY 159
Query: 229 HFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAP--ETED 285
H R G P+HH A RF+F+P++ D ++ P + + W + +L P E ++
Sbjct: 160 H--GQSRRCGGPVHHQAQRFRFSPMSTDHMSGGGGPRELIL---WLVVHLHLQPGQEADE 214
Query: 286 NVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
+LWQ+FGPFGAV NVKV+RD T KCKGFGFV M NY+EA AI SLNGY LGD++LQV
Sbjct: 215 AMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSLNGYRLGDKVLQV 274
Query: 346 SFKTHK 351
SFKT K
Sbjct: 275 SFKTSK 280
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 44/66 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+T++Q++++ +FS G + + +++ D+ + S G F+ + + +A+ A
Sbjct: 63 KDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDA 122
Query: 85 IIELNG 90
+ LNG
Sbjct: 123 VKHLNG 128
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 36 QTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQN 95
Q + L +F G V + K+IRD T + G+GFV E+A AI LNG +L +
Sbjct: 210 QEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSLNGYRLGD 269
Query: 96 KSIKVSY 102
K ++VS+
Sbjct: 270 KVLQVSF 276
>gi|444726522|gb|ELW67052.1| ELAV-like protein 4 [Tupaia chinensis]
Length = 423
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 237/400 (59%), Gaps = 84/400 (21%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T GYGFVNY +DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKIT----GYGFVNYIDPKDA 89
Query: 82 ERAIIELNGLKLQNKSIKVSYARPS------SEAIKRANLYVSGLPKHMTQEDLENLFRP 135
E+AI LNGL+LQ K+IK+ P + + +A+++ + +H + + L+
Sbjct: 90 EKAINTLNGLRLQTKTIKLEATGPCRCDDKVTYLVSQADVHSARFQQHFVIQREQTLWEQ 149
Query: 136 YGT---------IITS---------RILCDKMASENVRS---FVSGTP------------ 162
G +I S ++ + +S ++R +VSG P
Sbjct: 150 IGATQRMGHKENLIDSFYVFSKKEMKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF 209
Query: 163 --------------EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANS 208
++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+
Sbjct: 210 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 269
Query: 209 PAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RF-------------KFAPLTA 254
P+ ++ +QA + + + R + PLHH A RF +F+P+T
Sbjct: 270 PSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITI 321
Query: 255 DLLNNSM---LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYK 311
D + + + +P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T K
Sbjct: 322 DGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNK 379
Query: 312 CKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
CKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 380 CKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 419
>gi|1144009|gb|AAC53000.1| mHuC-S, partial [Mus musculus]
Length = 275
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 190/294 (64%), Gaps = 39/294 (13%)
Query: 74 NYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLF 133
NY DA++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF
Sbjct: 1 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 60
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
YG IITSRIL D+ +S+G+GF+RF++ IEAE A++ LNG
Sbjct: 61 SQYGRIITSRILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQK 105
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPL 252
P GA+EPITVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 106 PLGAAEPITVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNL 157
Query: 253 TADLLNNSMLPPKSLHG-SG--------------WCIFVYNLAPETEDNVLWQLFGPFGA 297
P ++ G SG WCIFVYNL+PE +++VLWQLFGPFGA
Sbjct: 158 LNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGA 217
Query: 298 VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 218 VTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 271
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 33 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 92
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A +LY S G H TQ
Sbjct: 93 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRF 152
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 153 RLDNLLNMAYGVKRFSPIAIDGMS 176
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 195 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 253
Query: 89 NGLKLQNKSIKVSY 102
NG +L + ++VS+
Sbjct: 254 NGYRLGERVLQVSF 267
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 204/333 (61%), Gaps = 46/333 (13%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T QSLGYGFVNY +D
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 121
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG II
Sbjct: 122 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 181
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D++ IS+G+GF+RF++ IEAE A++ LNG P GA+EP
Sbjct: 182 TSRILVDQVTG---------------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEP 226
Query: 201 ITVKFANSPAGRA-------------KALAANLNAQAAAMR-------HFAAAMRHFGNP 240
ITVKFAN+P+ + + L QA R + R+ G
Sbjct: 227 ITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRRYQGPR 286
Query: 241 LHHSARFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
+ +F+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGA+
Sbjct: 287 AQQTQHSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGALS 346
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ C F F C AV I S
Sbjct: 347 S----------SCGYFYFYCYLLVLRAVVLINS 369
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 147 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 206
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 207 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 244
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 84 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 143
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/364 (46%), Positives = 217/364 (59%), Gaps = 74/364 (20%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
M+QEE++ LFS+ G++ESCKLIRDK T +SLGY FV Y + +A++AI +LNGL LQNK+
Sbjct: 1 MSQEEVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVS ARP+ E+IK ANLY+SGLPK M Q +LE LF YG IIT+RIL D
Sbjct: 61 IKVSLARPNCESIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTG------ 114
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-TIP-----EGASEPITVKFANSPAG 211
IS+G+ F+RFN EAE A+Q+LNG +P + + PITVKFAN P
Sbjct: 115 ---------ISRGVAFIRFNHRYEAELAIQQLNGYQLPFEYSNDILNRPITVKFANPPNS 165
Query: 212 -------------------RAKALAA-NLNAQAAAMRHFAAAMRHFGNPLHH-------S 244
AK+ A + NA +A + AA + NPL S
Sbjct: 166 IKLDYFSLLLLKQAAQLQAVAKSAATPSPNATSAVI---AAELL---NPLQQQQRIATIS 219
Query: 245 ARFKF-----APLTADLL---------NNSMLPPK------SLHGSGWCIFVYNLAPETE 284
R K+ + DLL NNS+L P L +GWCIFVYNL+PE E
Sbjct: 220 NRLKYSMTSSSSTETDLLSTMVNTIGINNSILAPTIIASTGGLTPNGWCIFVYNLSPEVE 279
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
++ LW LFGPFGAVQ++K++ D KCKGF FV M+NY+EAV AI SLNGY L +R+LQ
Sbjct: 280 ESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIHSLNGYVLDNRILQ 339
Query: 345 VSFK 348
VSFK
Sbjct: 340 VSFK 343
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL ++ +P+TM Q EL+ LFS G + + +++ D T S G F+ + +AE AI
Sbjct: 76 ANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAELAIQ 135
Query: 87 ELNGLKLQ--------NKSIKVSYARP 105
+LNG +L N+ I V +A P
Sbjct: 136 QLNGYQLPFEYSNDILNRPITVKFANP 162
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + + L HLF G V+S K+I D T + G+ FV E+A AI L
Sbjct: 270 FVYNLSPE-VEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIHSL 328
Query: 89 NGLKLQNKSIKVSY 102
NG L N+ ++VS+
Sbjct: 329 NGYVLDNRILQVSF 342
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/365 (46%), Positives = 217/365 (59%), Gaps = 75/365 (20%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
M+QEE++ LFS+ G++ESCKLIRDK T +SLGY FV Y + +A++AI +LNGL LQNK+
Sbjct: 1 MSQEEVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVS ARP+ E+IK ANLY+SGLPK M Q +LE LF YG IIT+RIL D
Sbjct: 61 IKVSLARPNCESIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTG------ 114
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-TIP-----EGASEPITVKFANSPAG 211
IS+G+ F+RFN EAE A+Q+LNG +P + + PITVKFAN P
Sbjct: 115 ---------ISRGVAFIRFNHRYEAELAIQQLNGYQLPFEYSNDILNRPITVKFANPPNS 165
Query: 212 -------------------RAKALAA-NLNAQAAAMRHFAAAMRHFGNPLHH-------- 243
AK+ A + NA +A + AA + NPL
Sbjct: 166 IKLDYFSLLLLKQAAQLKAVAKSAATPSPNATSAVI---AAELL---NPLQQQQQRIATI 219
Query: 244 SARFKF-----APLTADLL---------NNSMLPPK------SLHGSGWCIFVYNLAPET 283
S R K+ + DLL NNS+L P L +GWCIFVYNL+PE
Sbjct: 220 SNRLKYSMTSSSSTETDLLSTMVNTIGINNSILAPTIIASTGGLTPNGWCIFVYNLSPEV 279
Query: 284 EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLL 343
E++ LW LFGPFGAVQ++K++ D KCKGF FV M+NY+EAV AI SLNGY L +R+L
Sbjct: 280 EESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIHSLNGYVLDNRIL 339
Query: 344 QVSFK 348
QVSFK
Sbjct: 340 QVSFK 344
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL ++ +P+TM Q EL+ LFS G + + +++ D T S G F+ + +AE AI
Sbjct: 76 ANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAELAIQ 135
Query: 87 ELNGLKLQ--------NKSIKVSYARP 105
+LNG +L N+ I V +A P
Sbjct: 136 QLNGYQLPFEYSNDILNRPITVKFANP 162
>gi|432104153|gb|ELK30980.1| ELAV-like protein 4 [Myotis davidii]
Length = 268
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/269 (52%), Positives = 184/269 (68%), Gaps = 42/269 (15%)
Query: 100 VSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
VSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSRIL D
Sbjct: 21 VSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVD------------ 68
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ ++
Sbjct: 69 ---QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKS------ 119
Query: 220 LNAQAAAMRHFAAAMRHFGNPLHHSA-RFK-------------FAPLTADLLNNSM---L 262
+QA + + + R + PLHH A RF+ F+P+T D + + + +
Sbjct: 120 --SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNI 177
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
P + G+GWCIFVYNL+P+++++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTN
Sbjct: 178 PGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 235
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
YDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 236 YDEAAMAIASLNGYRLGDRVLQVSFKTNK 264
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 27 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 86
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 87 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRF 146
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 147 RLDNLLNMAYGVKRFSPITIDGMTS 171
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P + + L LF G V + K+IRD T + G+GFV ++A AI L
Sbjct: 188 FVYNLSPDS-DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 246
Query: 89 NGLKLQNKSIKVSY 102
NG +L ++ ++VS+
Sbjct: 247 NGYRLGDRVLQVSF 260
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 207/349 (59%), Gaps = 38/349 (10%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
++ +++ +NLI+NYVP +M+QE+++ +F +VG V SCKLIRD+ T QSLGY FVNY
Sbjct: 2 ENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNP 61
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
+DA +A+ E+NG +LQNK++KVS+ARPSS IK ANLY+SGLPK M +E++E LF+P+G
Sbjct: 62 DDANKAVREMNGARLQNKTLKVSFARPSSTEIKNANLYISGLPKDMKEEEVEALFKPFGK 121
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
IITS++L D VSG +G GFVRF++ EA+ A+ +LN G +
Sbjct: 122 IITSKVLKD----------VSGE------GRGTGFVRFDKRCEAQTAIDDLNNKTLPGTN 165
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLL 257
+TVKFAN P R A+ + + R G P+HH +++P+TA
Sbjct: 166 VKLTVKFANPPNSRQPAMPLSPALTSPLGRALTPQRNFSGGPVHHQMLNMRYSPMTASSF 225
Query: 258 NNSM---------------LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ + L GWCIFVY L E L++LF P+GA+ N++
Sbjct: 226 SPACQANCHSPNNSSSNSYTNLSGLTPQGWCIFVYGLPQEATPLFLYKLFSPYGAITNIE 285
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ D KG+GFV M+NY+EA AI LNG ++LQVSFKT K
Sbjct: 286 LKLD------KGYGFVNMSNYEEACHAICCLNGTPQHGKILQVSFKTPK 328
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
M + N T S +N+NL ++ +P+ M +EE++ LF G++ + K+++D
Sbjct: 71 MNGARLQNKTLKVSFARPSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD 130
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIK--VSYARP 105
+ + G GFV + + +A+ AI +LN L ++K V +A P
Sbjct: 131 -VSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLTVKFANP 175
>gi|221112748|ref|XP_002162771.1| PREDICTED: ELAV-like protein 3-like [Hydra magnipapillata]
Length = 376
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/351 (45%), Positives = 211/351 (60%), Gaps = 43/351 (12%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q +E +NLI+NY+PQ MT+EEL+ LFSSVG +ESCKLIRDK T SLGY FVNY
Sbjct: 37 QDPDDENPTNLIINYLPQEMTEEELRTLFSSVGPLESCKLIRDKVTRASLGYAFVNYQHA 96
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
DA +AI L G+KL NK+IKVS ARPS IK ANLYVSGLP + DL LF YG+
Sbjct: 97 ADARKAIESLQGMKLTNKTIKVSVARPSCTEIKNANLYVSGLPLTCNENDLRELFASYGS 156
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE--G 196
IIT ++L ++ SG S+G+GFVRF++ +AE A+ LN IPE G
Sbjct: 157 IITIKVLYEE----------SGQ------SRGVGFVRFDKRNDAEAAINGLNNRIPEING 200
Query: 197 ASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFG----NPLHHSARFKFAPL 252
A +P+TVKFAN P+ + + ++ AQA + +A +R G +P++ S A L
Sbjct: 201 AIKPLTVKFANPPSQKIQPY-LDILAQAKGLAG-SAFLRQVGLSQLSPINSSG----ASL 254
Query: 253 TADLLNNSMLPPKSL--------------HGSGWCIFVYNLAPETEDNVLWQLFGPFGAV 298
T +N+ + P S+ + WC+FVYNL + + L+QLF FGA+
Sbjct: 255 TTSPINSPLSPNSSVLRNNLVVNSSNSSLNNPSWCVFVYNLPSDASELTLFQLFSKFGAI 314
Query: 299 QNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL-GDRLLQVSFK 348
Q+ +VV D T KCKGFGFV M +Y++A AI LNGY + LQVSFK
Sbjct: 315 QSTRVVYDENTKKCKGFGFVNMAHYEDATMAILHLNGYCCERGKPLQVSFK 365
>gi|608545|gb|AAA96938.1| ribonucleoprotein, partial [Danio rerio]
Length = 245
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 181/265 (68%), Gaps = 29/265 (10%)
Query: 91 LKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
L+LQ+K+IKVSYARPSS++IK ANLY+SGLPK MTQ+D+E +F YG II SR+L D+ +
Sbjct: 3 LRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQAS 62
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
+S+G+ F+RF++ EAE A+++LNG P GA+E +TVKFA SP
Sbjct: 63 G---------------LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTVKFAASP- 106
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSM---LPPKS 266
+ K N Q + + R FG P+HH A RF+F+P++ D ++ +P S
Sbjct: 107 NQVK------NTQVIPQVYHQQS-RRFGGPVHHQAQRFRFSPMSVDHMSGMSGVNVPGNS 159
Query: 267 LHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEA 326
SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MT+Y+EA
Sbjct: 160 --SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEA 217
Query: 327 VFAIQSLNGYALGDRLLQVSFKTHK 351
AI SLNGY LGD++LQVSFKT K
Sbjct: 218 AMAIASLNGYRLGDKILQVSFKTSK 242
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +F G + + +++ D+ + S G F+ + + +AE A
Sbjct: 23 KDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDA 82
Query: 85 IIELNGLK 92
I +LNG K
Sbjct: 83 IKDLNGQK 90
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV E+A AI LNG +L +K ++VS+
Sbjct: 179 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASLNGYRLGDKILQVSF 238
Query: 103 ARPSS 107
S
Sbjct: 239 KTSKS 243
>gi|345326434|ref|XP_001510704.2| PREDICTED: hypothetical protein LOC100079778 [Ornithorhynchus
anatinus]
Length = 620
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/268 (52%), Positives = 177/268 (66%), Gaps = 42/268 (15%)
Query: 99 KVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFV 158
+VSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSRIL D++
Sbjct: 306 QVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG------- 358
Query: 159 SGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAA 218
+S+G+GF+RF++ IEAE A++ LNG P GASEPITVKFAN+P+ +
Sbjct: 359 --------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQK------ 404
Query: 219 NLNAQAAAMRHFAAAMRHFGNPLHH-SARFK-------------FAPLTADLLNNSMLPP 264
QA + R + PLHH + RF+ F+P+T D + + L
Sbjct: 405 --TGQALLTHLYQTTARRYTGPLHHQTQRFRLDNLLNMAYGVKRFSPITIDSMTS--LAG 460
Query: 265 KSLHGS---GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+L G+ GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MT
Sbjct: 461 VNLTGASSAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMT 520
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKT 349
NYDEA AI SLNGY LGDR+LQVSFKT
Sbjct: 521 NYDEAAMAIASLNGYRLGDRILQVSFKT 548
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 313 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 372
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLY------VSGLPKHMTQE- 127
+AE AI LNG K S I V +A S+ +A +LY +G H TQ
Sbjct: 373 EAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRF 432
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 433 RLDNLLNMAYGVKRFSPITIDSMTS 457
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 474 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 532
Query: 89 NGLKLQNKSIKVSY 102
NG +L ++ ++VS+
Sbjct: 533 NGYRLGDRILQVSF 546
>gi|345308310|ref|XP_003428682.1| PREDICTED: ELAV-like protein 2-like [Ornithorhynchus anatinus]
Length = 595
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/268 (51%), Positives = 177/268 (66%), Gaps = 39/268 (14%)
Query: 100 VSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
VSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSRIL D
Sbjct: 347 VSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVD------------ 394
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ +
Sbjct: 395 ---QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN----- 446
Query: 220 LNAQAAAMRHFAAAMRHFGNPLHHSA-RFK--------------FAPLTADLLNN-SMLP 263
QA + + + R + PL A RF+ F+P+T D + + + +
Sbjct: 447 ---QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGIN 503
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 504 IPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 563
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 564 DEAAMAIASLNGYRLGDRVLQVSFKTNK 591
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
+ + +NLIVNY+PQ MTQEEL+ LF S+GE+ESCKL+RDK T +
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITDE 78
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 353 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 412
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K + I V +A S+ +A L
Sbjct: 413 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAIL 450
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV ++A AI LNG +L ++ ++VS+
Sbjct: 528 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 587
>gi|239938030|gb|ACS36114.1| RNA-binding protein Elav2 [Capitella teleta]
Length = 341
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 202/342 (59%), Gaps = 37/342 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQT+T EE + +F ++G V++ K++RDK T S G+GFV+Y DA +AI
Sbjct: 19 TNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTGYSYGFGFVDYNLESDASKAIQ 78
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK IKV+Y+R S E IK ANLYV +P+ MTQ +LE +F P+G II SRIL
Sbjct: 79 TLNGLQLQNKRIKVAYSR-SGEQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILT 137
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + + SKG+GF+ FN +AE+A+ L+G +PEG P VK A
Sbjct: 138 DVGSGQ---------------SKGVGFILFNTRDQAENAISHLDGFVPEGGELPFNVKHA 182
Query: 207 NSPAGRAKALAANLNA-QAAAMRHFAAAMRHFGN--------------PLHHSARF-KFA 250
G+A+ +N Q+ + FGN P+ RF +F
Sbjct: 183 EDNRGKARPPVIVVNQRQSGGGPPPPPPSQLFGNGTAEGYGAGPGGYGPMRSQNRFNRFN 242
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
P+T++ +NS + SG+ +FVYN+ P+ ++ LWQLF PFG VQ V V+RD
Sbjct: 243 PMTSNYNSNS----APIGDSGFVLFVYNIGPDADERELWQLFSPFGVVQKVNVIRDTAKN 298
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYA-LGDRLLQVSFKTHK 351
KGFGFV M NY EA+ AI +LNGY ++ LQVSFKT K
Sbjct: 299 TGKGFGFVSMANYQEAMSAIHNLNGYKYYQNKPLQVSFKTPK 340
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL V +P+TMTQ EL+ +FS GE+ +++ D + QS G GF+ + + AE A
Sbjct: 102 KGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTDVGSGQSKGVGFILFNTRDQAENA 161
Query: 85 IIELNGL 91
I L+G
Sbjct: 162 ISHLDGF 168
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 2 MKHEEMYNTTQSHRSTYQSD---VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKL 58
M+ + +N S Y S+ + + L V + + EL LFS G V+ +
Sbjct: 232 MRSQNRFNRFNPMTSNYNSNSAPIGDSGFVLFVYNIGPDADERELWQLFSPFGVVQKVNV 291
Query: 59 IRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLK-LQNKSIKVSYARPSS 107
IRD G+GFV+ ++A AI LNG K QNK ++VS+ P +
Sbjct: 292 IRDTAKNTGKGFGFVSMANYQEAMSAIHNLNGYKYYQNKPLQVSFKTPKA 341
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
+ + NL ++ LP+ +T E+ ++F G + S+I+ DKM S
Sbjct: 16 LSKTNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTG---------------YSY 60
Query: 170 GIGFVRFNQHIEAEHAMQELNG 191
G GFV +N +A A+Q LNG
Sbjct: 61 GFGFVDYNLESDASKAIQTLNG 82
>gi|242531301|gb|ACS92975.1| Elav [Ptychodera flava]
Length = 216
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 167/239 (69%), Gaps = 24/239 (10%)
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+A+ LNGL+LQ K+IKVS+ARPSS+AIK ANLYV GLPK+MTQ+DLE +F P G IITS
Sbjct: 1 KAMNTLNGLRLQAKTIKVSHARPSSQAIKDANLYVCGLPKNMTQKDLEEMFEPVGRIITS 60
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RILCD + +S+G+GF+RF++ IEAE A++ NG IP GA +PIT
Sbjct: 61 RILCDSVTG---------------LSRGVGFIRFDRRIEAEEAIKRFNGKIPNGAIDPIT 105
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR-FKFAPLTADLLNNSM 261
VKFAN+P+ +A+A + A+ R + PLHH R F+++P+ +LL N
Sbjct: 106 VKFANNPSQN--------HAKALQQAYLASPTRRYPGPLHHQTRNFRYSPMGGELLGNVG 157
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
+ S +G GWCIFVYNL+PETE+++LWQLFGPFGAV NVKV+RD T KCKGFGFV M
Sbjct: 158 MNSISNNGQGWCIFVYNLSPETEESLLWQLFGPFGAVTNVKVMRDFSTNKCKGFGFVTM 216
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+ MTQ++L+ +F VG + + +++ D T S G GF+ + R +AE A
Sbjct: 29 KDANLYVCGLPKNMTQKDLEEMFEPVGRIITSRILCDSVTGLSRGVGFIRFDRRIEAEEA 88
Query: 85 IIELNGLKLQNKSI 98
I NG K+ N +I
Sbjct: 89 IKRFNG-KIPNGAI 101
>gi|443690134|gb|ELT92349.1| hypothetical protein CAPTEDRAFT_169706 [Capitella teleta]
Length = 383
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 202/342 (59%), Gaps = 37/342 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQT+T EE + +F ++G V++ K++RDK T S G+GFV+Y DA +AI
Sbjct: 61 TNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTGYSYGFGFVDYNLESDASKAIQ 120
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK IKV+Y+R S E IK ANLYV +P+ MTQ +LE +F P+G II SRIL
Sbjct: 121 TLNGLQLQNKRIKVAYSR-SGEQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILT 179
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D + + SKG+GF+ FN +AE+A+ L+G +PEG P VK A
Sbjct: 180 DVGSGQ---------------SKGVGFILFNTRDQAENAISHLDGFVPEGGELPFNVKHA 224
Query: 207 NSPAGRAKALAANLNA-QAAAMRHFAAAMRHFGN--------------PLHHSARF-KFA 250
G+A+ +N Q+ + FGN P+ RF +F
Sbjct: 225 EDNRGKARPPVIVVNQRQSGGGPPPPPPSQLFGNGTAEGYGAGPGGYGPMRSQNRFNRFN 284
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
P+T++ +NS + SG+ +FVYN+ P+ ++ LWQLF PFG VQ V V+RD
Sbjct: 285 PMTSNYNSNS----APIGDSGFVLFVYNIGPDADERELWQLFSPFGVVQKVNVIRDTAKN 340
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYA-LGDRLLQVSFKTHK 351
KGFGFV M NY EA+ AI +LNGY ++ LQVSFKT K
Sbjct: 341 TGKGFGFVSMANYQEAMSAIHNLNGYKYYQNKPLQVSFKTPK 382
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/251 (53%), Positives = 171/251 (68%), Gaps = 26/251 (10%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
S+ +SD + +NLI+NY+PQ MTQEE+ LFS++GE++SCKL+RDK T QSLGYGF
Sbjct: 71 SNSPILESDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGF 130
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
VNY R EDA +A+ LNGL+LQNK+IKVS+ARPSSE+IK ANLYVSGL K M+Q DLE L
Sbjct: 131 VNYVRQEDAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEAL 190
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F+P+G IITSRIL D V+G ISKG+GFVRF++ EAE A+ +LNG
Sbjct: 191 FKPFGQIITSRILSDN---------VTG------ISKGVGFVRFDRKSEAEDAIDKLNGK 235
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA--------AAMRHFGNPLHHS 244
IP G +EPITVKFANSPA A+ + A+A+ A + R P+HH+
Sbjct: 236 IPAGCTEPITVKFANSPAANAQKAQLQIAQAASALMPLALLSSISATSGRRIGAGPIHHT 295
Query: 245 ---ARFKFAPL 252
RF++ PL
Sbjct: 296 PQAGRFRYTPL 306
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 258 NNSMLPPKS--LHGSGWCI---FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
++SMLP S L G + N P+ T++ V LF G + + K+VRD T
Sbjct: 65 SSSMLPSNSPILESDGEAKATNLIINYLPQNMTQEEV-HALFSTLGEIDSCKLVRDKVTG 123
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ G+GFV ++A A+ SLNG L ++ ++VSF
Sbjct: 124 QSLGYGFVNYVRQEDAYKAVTSLNGLRLQNKTIKVSF 160
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 32/72 (44%)
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
P S G ++V LA L LF PFG + +++ D T KG GFV
Sbjct: 163 PSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRK 222
Query: 324 DEAVFAIQSLNG 335
EA AI LNG
Sbjct: 223 SEAEDAIDKLNG 234
>gi|325296731|ref|NP_001191601.1| ELAV 2-like protein [Aplysia californica]
gi|65307079|gb|AAY42042.1| ELAV 2-like protein [Aplysia californica]
Length = 325
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 198/330 (60%), Gaps = 25/330 (7%)
Query: 21 DVNEQNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
DV++ +S NLI+NY+PQT+T EE + +F SVG V+S K++RDK+T S G+GFV++
Sbjct: 11 DVDDSSSTNLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTGYSYGFGFVDFQHPT 70
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
DA+RAI L+GL+LQNK IKV+ ARP + IK ANLY+ LP + +L +F PYG I
Sbjct: 71 DAQRAIETLSGLQLQNKRIKVALARPGGDQIKGANLYIRNLPVAWKETELNKIFEPYGKI 130
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
I SR+L D ISK +GFV ++ EAE+A++ L+G +PEGA+E
Sbjct: 131 IQSRVLVDLSTG---------------ISKRVGFVLYDTRDEAENAIKCLSGKVPEGATE 175
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF-KFAPLTADLLN 258
I +KFA+ +K L Q + +FAA G + RF +F P+ +
Sbjct: 176 AIMIKFADD---NSKKLKQQGPVQYVPIPNFAAP----GPMRNQMNRFQRFNPMAGNFNG 228
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
P++ G G+ +FVYN+ D LWQLF PFG VQ V ++ D + +CKG+GFV
Sbjct: 229 QGPGMPQAQQG-GYTLFVYNIGFNATDRTLWQLFSPFGTVQKVNIMLDHEKNQCKGYGFV 287
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
MTNY EA AI LNGY R+LQVSFK
Sbjct: 288 TMTNYQEAQNAINCLNGYFFQGRVLQVSFK 317
>gi|16648054|gb|AAL25292.1| GH07919p [Drosophila melanogaster]
Length = 238
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 169/244 (69%), Gaps = 26/244 (10%)
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
MTQ DLE+LF PYG IITSRILCD + E+ +SKG+GF+RF+Q EA+
Sbjct: 1 MTQSDLESLFSPYGKIITSRILCDNITDEHAAG----------LSKGVGFIRFDQRFEAD 50
Query: 184 HAMQELNGTIPEGASEPITVKFANSPAGRAKA---LAANLNAQ-------------AAAM 227
A++ELNGT P+ ++EPITVKFAN+P+ + LAA + Q A A
Sbjct: 51 RAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAA 110
Query: 228 RHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNV 287
AAA H + S +++PLT+DL+ N M+ ++ SGWCIFVYNLAP+TE+NV
Sbjct: 111 AAAAAAAIHPNAGRYSSVISRYSPLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENV 170
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LWQLFGPFGAVQ+VKV+RD Q+ KCKGFGFV MTNY+EAV AIQSLNGY LG+R+LQVSF
Sbjct: 171 LWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSF 230
Query: 348 KTHK 351
KT+K
Sbjct: 231 KTNK 234
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P T + L LF G V+S K+IRD + + G+GFV E+A AI L
Sbjct: 158 FVYNLAPDT-EENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 216
Query: 89 NGLKLQNKSIKVSY 102
NG L N+ ++VS+
Sbjct: 217 NGYTLGNRVLQVSF 230
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQ-----SLGYGFVNYYRTEDAERAIIELNGLK 92
MTQ +L+ LFS G++ + +++ D T + S G GF+ + + +A+RAI ELNG
Sbjct: 1 MTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTT 60
Query: 93 LQNKS--IKVSYA-RPSS 107
+N + I V +A PSS
Sbjct: 61 PKNSTEPITVKFANNPSS 78
>gi|348550983|ref|XP_003461310.1| PREDICTED: ELAV-like protein 3-like [Cavia porcellus]
Length = 379
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/268 (51%), Positives = 173/268 (64%), Gaps = 39/268 (14%)
Query: 100 VSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
VSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSRIL D++
Sbjct: 131 VSYARPSSASIRDANLYVSGLPKSMSQKEMEQLFSQYGRIITSRILVDQVTG-------- 182
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ +
Sbjct: 183 -------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQK------- 228
Query: 220 LNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPLTADLLNNSMLPPKSLHG-SG------ 271
QA + + ++ R + PLHH + RF+ L P ++ G SG
Sbjct: 229 -TGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGL 287
Query: 272 --------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNY
Sbjct: 288 SGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNY 347
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA AI SLNGY LG+R+LQVSFKT K
Sbjct: 348 DEAAMAIASLNGYRLGERVLQVSFKTSK 375
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P++M+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 137 SSASIRDANLYVSGLPKSMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 196
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H TQ
Sbjct: 197 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQSSARRYAGPLHHQTQRF 256
Query: 128 DLENLFR-PYGTIITSRILCDKMA 150
L+NL YG S I D M+
Sbjct: 257 RLDNLLNMAYGVKRFSPIAIDGMS 280
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 299 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 357
Query: 89 NGLKLQNKSIKVSY 102
NG +L + ++VS+
Sbjct: 358 NGYRLGERVLQVSF 371
>gi|195566472|ref|XP_002106804.1| GD17091 [Drosophila simulans]
gi|194204196|gb|EDX17772.1| GD17091 [Drosophila simulans]
Length = 371
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 167/250 (66%), Gaps = 44/250 (17%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT------------------ 64
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK T
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVTRNLVLPASLTALNPALQQ 81
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
QSLGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK++
Sbjct: 82 GQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNL 141
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+Q DLE +F +G IITSRILCD +SG +SKG+GF+RF+Q EAE
Sbjct: 142 SQPDLEGMFASFGKIITSRILCDN---------ISG------LSKGVGFIRFDQRNEAER 186
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKA-----LAANLNAQAAAMRHFAAAMRHFGN 239
A+QELNG P+G +EPITVKFAN+P+ AKA L A L QA AAA R
Sbjct: 187 AIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQA------AAATRRLAG 240
Query: 240 PLHHSARFKF 249
L + R +F
Sbjct: 241 ALPSAGRIRF 250
>gi|47210814|emb|CAF92867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 175/262 (66%), Gaps = 32/262 (12%)
Query: 97 SIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRS 156
S++VSYARPSSE IK ANLY+SGLP+ +Q+DLE++F YG II SR+L D+ +
Sbjct: 208 SLQVSYARPSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASG----- 262
Query: 157 FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
+S+G+ F+RF++ EAE A++ LNG P G+SEPITVKFA +P +A
Sbjct: 263 ----------VSRGVAFIRFDKRSEAEDAIKHLNGHTPPGSSEPITVKFATNPN---QAR 309
Query: 217 AANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFK------FAPLTADLLNNSMLPPKSLHG 269
++ + +Q + R FG P+HH A RF+ F+P++ D +++ S
Sbjct: 310 SSQMMSQM-----YHGQSRRFGGPVHHQAQRFRYMPKVRFSPMSVDHVSSGGASGNS--P 362
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+GWCIF+YNL E ++ +LWQLFGPFGAV NVKV+RD T KCKGFGFV M+NY+EA A
Sbjct: 363 NGWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMA 422
Query: 330 IQSLNGYALGDRLLQVSFKTHK 351
I SLNGY LGD++LQVSFKT K
Sbjct: 423 IHSLNGYRLGDKVLQVSFKTSK 444
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
+ +NLIVNY+PQ+M+QEEL+ LFSSVG+VES KLIRDK +
Sbjct: 52 DARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGNT 95
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 43/66 (65%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+T +Q++L+ +FS G + + +++ D+ + S G F+ + + +AE A
Sbjct: 222 KDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDA 281
Query: 85 IIELNG 90
I LNG
Sbjct: 282 IKHLNG 287
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 14 HRSTYQSDVNEQNSNLIVNY-VPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
H S+ + N N I Y + Q + L LF G V + K+IRD T++ G+GF
Sbjct: 351 HVSSGGASGNSPNGWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGF 410
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
V E+A AI LNG +L +K ++VS+
Sbjct: 411 VTMSNYEEAAMAIHSLNGYRLGDKVLQVSF 440
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/265 (49%), Positives = 176/265 (66%), Gaps = 30/265 (11%)
Query: 5 EEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT 64
+ Y +TQ + S D+ E +NLI+NY+PQ MTQEE++ LF+S+GE+ESCKL+RDK T
Sbjct: 20 QTTYTSTQRYCSAPNVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVT 79
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
QSLGYGFVNY R EDA RA+ NGL+LQNK+IKVSYARPS++ IK +NLYVSG+PK M
Sbjct: 80 GQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSM 139
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
T +LE++FRP+G IITSRIL D V+G +SKG+GFVRF++ EA+
Sbjct: 140 TLHELESIFRPFGQIITSRILSDN---------VTG------LSKGVGFVRFDKKDEADV 184
Query: 185 AMQELNGTIPEGASEPITVKFANSPAG-RAKALAANLNAQAAAMRHFAAAMRHFG----- 238
A++ LNG+IP G SE ITVKFAN+PA K L ++L A A G
Sbjct: 185 AIKTLNGSIPSGCSEQITVKFANNPASNNPKGLLSDLEAVQQAATTLVPLSTILGAPTLR 244
Query: 239 ------NPLHH---SARFKFAPLTA 254
P+HH +++++++P+ A
Sbjct: 245 ATAGGIGPMHHAPITSKYRYSPMGA 269
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 174/389 (44%), Gaps = 100/389 (25%)
Query: 15 RSTYQSDVNEQ--NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
+ +Y N+Q SNL V+ +P++MT EL+ +F G++ + +++ D T S G GF
Sbjct: 114 KVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGF 173
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
V + + ++A+ AI LNG S +++ +K AN S PK + DLE +
Sbjct: 174 VRFDKKDEADVAIKTLNGSIPSGCSEQIT--------VKFANNPASNNPKGLL-SDLEAV 224
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
+ T++ S + G P + + GIG HA
Sbjct: 225 QQAATTLVP-------------LSTILGAPTLRATAGGIG--------PMHHA------- 256
Query: 193 IPEGASEPITVKFANSPAGRAKALA-------------------------ANLN--AQAA 225
PIT K+ SP G A++ A LN A A
Sbjct: 257 -------PITSKYRYSPMGAITAVSQPTATLPADYLTTSALLQMSQLNALAGLNPFATAT 309
Query: 226 AMRHFAAAMRHF----------------------GNPLHHSARFKFAPLTADLLNNSMLP 263
A+ F A++ G +A + + L+A + + LP
Sbjct: 310 AVPDFTASLIAHQQQQHAVAQQHAAQTASPPATNGQVAGLAAHAQLSALSASVA--ATLP 367
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
P +G+C+FVYNL+ +T+D +LWQLF FGA+ NVK++RD T +CKG+ FV M+NY
Sbjct: 368 PSDT--AGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNY 424
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
EA A+ SLNG L + LQV FK+ P
Sbjct: 425 TEAYNAMLSLNGTNLAGKTLQVVFKSSTP 453
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LF G +++ K+VRD T + G+GFV ++A+ A+ S NG L ++ ++VS+
Sbjct: 61 LFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSY 117
>gi|198425950|ref|XP_002126161.1| PREDICTED: similar to ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D) [Ciona intestinalis]
Length = 564
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 165/232 (71%), Gaps = 19/232 (8%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
++E +NLI+NY+PQ MTQE+L++LFSS+GE+ESCKLIRDK T QSLGYGFVNY + D
Sbjct: 82 SMDESKTNLIINYLPQAMTQEDLRNLFSSIGELESCKLIRDKLTGQSLGYGFVNYVKAAD 141
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
AE+AI LNGL++Q K+IKVS+ARPS+ IK ANLYVSGLPK MTQEDL+ +F P+G II
Sbjct: 142 AEKAINSLNGLRMQQKTIKVSFARPSTPLIKDANLYVSGLPKSMTQEDLQRIFHPFGRII 201
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL + +S+G+GFVRF++ EAE+A+ LNGTIP GA +P
Sbjct: 202 TSRILVEPSTG---------------MSRGVGFVRFDKRPEAENAISALNGTIPAGAKDP 246
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR-FKFAP 251
+TVKFAN+P+ + + + +L A A+ R A PL+H AR F+ +P
Sbjct: 247 VTVKFANNPSQKNQQVLQSLYAAASPTRRLATPA---AGPLYHQARNFRASP 295
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%)
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
G CIFVYNLAPET++N+LWQLFGPFGAV +VKV+RD QT KCKG+GFV MTNY+EA A+
Sbjct: 481 GICIFVYNLAPETDENILWQLFGPFGAVTSVKVIRDYQTQKCKGYGFVTMTNYEEAFIAV 540
Query: 331 QSLNGYALGDRLLQVSF 347
SLNGY LGDR+LQVS
Sbjct: 541 CSLNGYKLGDRVLQVSL 557
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+T + L LF G V S K+IRD T + GYGFV E+A A+ L
Sbjct: 485 FVYNLAPET-DENILWQLFGPFGAVTSVKVIRDYQTQKCKGYGFVTMTNYEEAFIAVCSL 543
Query: 89 NGLKLQNKSIKVSYAR 104
NG KL ++ ++VS +
Sbjct: 544 NGYKLGDRVLQVSLTK 559
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 84/224 (37%), Gaps = 73/224 (32%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL ++ LP+ MTQEDL NLF G + + +++ DK+ +++ G
Sbjct: 87 KTNLIINYLPQAMTQEDLRNLFSSIGELESCKLIRDKLTGQSL---------------GY 131
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
GFV + ++A A + +N +LN +
Sbjct: 132 GFVNY---VKAADAEKAIN----------------------------SLNGLRMQQKTIK 160
Query: 232 AAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
+ PL A + L PKS+ ED L ++
Sbjct: 161 VSFARPSTPLIKDANLYVSGL-----------PKSM--------------TQED--LQRI 193
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
F PFG + +++ +P T +G GFV EA AI +LNG
Sbjct: 194 FHPFGRIITSRILVEPSTGMSRGVGFVRFDKRPEAENAISALNG 237
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L LF G +++ K++RD T + G+GFV +A AI SLNG + + ++VSF
Sbjct: 104 LRNLFSSIGELESCKLIRDKLTGQSLGYGFVNYVKAADAEKAINSLNGLRMQQKTIKVSF 163
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 212/392 (54%), Gaps = 75/392 (19%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ + +NLIVNY+PQT+T+E L+ LFS G V SCKLI+DK++ SLGYGFVNY
Sbjct: 16 QNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSA 75
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
E+AE AI ++NG L++K++KVSYARPSS AIK AN+YV+ LP ++ +L+ LF+PYGT
Sbjct: 76 EEAEHAIQKMNGTTLESKTLKVSYARPSSVAIKNANVYVANLPPQLSLTELDALFQPYGT 135
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
IITS++L D E +G+GFVRF+++ +AE A+ LNG G +
Sbjct: 136 IITSKVLTD---------------EDTGAGRGVGFVRFDKYTQAEVAIAALNGKQLVGGT 180
Query: 199 EPITVKFANSP------AGRAKALAAN---------LN-------------------AQA 224
+P+ VKFAN P G AN LN
Sbjct: 181 QPLLVKFANPPKAATPLTGTVPGGLANQIMTQTQKRLNNNGSSSSAASSMSYTSTNGGSV 240
Query: 225 AAMRHFAAAMRHFGNPL---------------HHSARFKFAPLTADLLNNSMLPPKSLHG 269
MRH NP+ + +A +T + N + L P + G
Sbjct: 241 GPMRHIPTVSNMRYNPVSSLPTAGLPTAAGMVNPAAMAALTGMTTGVPNLANLAPVA-GG 299
Query: 270 SG----------WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+G +C+FVYNL +D +L+QLF PFGA+ +V V+RD ++ CK +GFV
Sbjct: 300 NGSTMTSPGDPSYCVFVYNLPETCQDFLLYQLFSPFGAITSVNVIRDLKSGLCKRYGFVN 359
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
M +Y++A AI +LNGY + LQVSFK K
Sbjct: 360 MKSYEDACSAIMTLNGYVHDGKTLQVSFKNQK 391
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 164/232 (70%), Gaps = 24/232 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 58 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 117
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 118 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 177
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D+ V+G +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 178 SRILVDQ---------VTG------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA-RFKFAPL 252
TVKFAN+P+ ++ +QA + + + R + PLHH A RF+ L
Sbjct: 223 TVKFANNPSQKS--------SQALLSQLYQSPNRRYPGPLHHQAQRFRLDNL 266
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 82 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 138
>gi|268529184|ref|XP_002629718.1| C. briggsae CBR-EXC-7 protein [Caenorhabditis briggsae]
Length = 456
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 171/262 (65%), Gaps = 30/262 (11%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
Y+ TQ + + D+ E +NLI+NY+PQ MTQEE++ LF+S+GE+ESCKL+RDK T QS
Sbjct: 26 YSGTQRYCTAPNVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQS 85
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
LGYGFVNY R EDA RA+ NGL+LQNK+IKVSYARPS++ IK +NLYVSG+PK MT
Sbjct: 86 LGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLH 145
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
+LE +FRP+G IITSRIL D V+G +SKG+GFVRF++ EA+ A++
Sbjct: 146 ELEGIFRPFGQIITSRILSDN---------VTG------LSKGVGFVRFDKKDEADTAIK 190
Query: 188 ELNGTIPEGASEPITVKFANSPAG-RAKALAANLNAQAAAMRHFAAAMRHFG-------- 238
LNG+IP G SE ITVKFAN+PA K L L A G
Sbjct: 191 TLNGSIPTGCSEQITVKFANNPASNNPKGLLGELEGLQQAATTLVPLSTILGAPTLRAAA 250
Query: 239 ---NPLHH---SARFKFAPLTA 254
P+HH +++++++P+ A
Sbjct: 251 GGIGPMHHTPITSKYRYSPMGA 272
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 175/374 (46%), Gaps = 67/374 (17%)
Query: 12 QSHRSTYQSDVNEQ--NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
++ + +Y N+Q SNL V+ +P++MT EL+ +F G++ + +++ D T S G
Sbjct: 114 KTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELEGIFRPFGQIITSRILSDNVTGLSKG 173
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDL 129
GFV + + ++A+ AI LNG S +++ +K AN S PK + E L
Sbjct: 174 VGFVRFDKKDEADTAIKTLNGSIPTGCSEQIT--------VKFANNPASNNPKGLLGE-L 224
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
E L + T++ S + G P + + GIG + + I +++
Sbjct: 225 EGLQQAATTLVP-------------LSTILGAPTLRAAAGGIGPMH-HTPITSKYRYS-- 268
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALA----ANLNAQAAAMRHFAAAMRHF-------- 237
P GA ++ A PA A + LNA A A A+ F
Sbjct: 269 ----PMGAITAVSQPTATLPADYLTTSALLQMSQLNALAGLTPFTATAVPDFTASLLAHQ 324
Query: 238 -------------------GNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYN 278
N +A + + L+A + + LPP +G+C+FVYN
Sbjct: 325 QQQQAAAQQQVAQTASPPAANGAGIAAHAQLSALSASVA--ATLPPSDT--AGYCLFVYN 380
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL 338
LA +T+D +LWQLF FGA+ NVK++RD + KCKG+ FV M+ Y EA A+ SLNG L
Sbjct: 381 LAADTDDTLLWQLFSQFGAILNVKILRD-ISQKCKGYAFVSMSTYTEAYNAMVSLNGTNL 439
Query: 339 GDRLLQVSFKTHKP 352
+ LQV FK+ P
Sbjct: 440 AGKPLQVVFKSSTP 453
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LF G +++ K+VRD T + G+GFV ++A+ A+ S NG L ++ ++VS+
Sbjct: 64 LFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSY 120
>gi|345433354|dbj|BAK69334.1| RNA binding protein Elav [Balanoglossus simodensis]
Length = 233
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 164/241 (68%), Gaps = 20/241 (8%)
Query: 92 KLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMAS 151
+LQ K+IKVS+ARPSS+AIK ANLYV GLPK MTQ+DLE +F P G IITSRILCD +
Sbjct: 1 RLQAKTIKVSHARPSSQAIKDANLYVCGLPKSMTQKDLEEMFEPVGRIITSRILCDSITG 60
Query: 152 ------ENVRSFVSGTPEIPQ-----ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ G ++ +S+G+GF+RF++ IEAE A++ NG IP GA +P
Sbjct: 61 IWESRPHDTEKGKHGNEKLETSSNTGLSRGVGFIRFDRRIEAEEAIKRFNGKIPAGAIDP 120
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR-FKFAPLTADLLNN 259
ITVKFAN+P+ +A+A + A+ R + PLHH AR F+++P+ +LL N
Sbjct: 121 ITVKFANNPSQN--------HAKALQQAYLASPTRRYPGPLHHQARNFRYSPMGGELLGN 172
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ S +G GWCIFVYNL+PETE+++LWQLFGPFGAV NVKV+RD T KCKGFGFV
Sbjct: 173 VGMNSISNNGQGWCIFVYNLSPETEESLLWQLFGPFGAVTNVKVMRDFSTNKCKGFGFVT 232
Query: 320 M 320
M
Sbjct: 233 M 233
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 26/92 (28%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD----------------------- 61
+++NL V +P++MTQ++L+ +F VG + + +++ D
Sbjct: 20 KDANLYVCGLPKSMTQKDLEEMFEPVGRIITSRILCDSITGIWESRPHDTEKGKHGNEKL 79
Query: 62 ---KTTAQSLGYGFVNYYRTEDAERAIIELNG 90
T S G GF+ + R +AE AI NG
Sbjct: 80 ETSSNTGLSRGVGFIRFDRRIEAEEAIKRFNG 111
>gi|341901304|gb|EGT57239.1| CBN-EXC-7 protein [Caenorhabditis brenneri]
Length = 459
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 176/268 (65%), Gaps = 30/268 (11%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
++ + Y +TQ + + D+ E +NLI+NY+PQ MTQEE++ LF+S+GE+ESCKL+RD
Sbjct: 17 VQTQNTYTSTQRYCTAPNVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRD 76
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP 121
K T QSLGYGFVNY + DA RA+ NGL+LQNK+IKVSYARPS++ IK +NLYVSG+P
Sbjct: 77 KVTGQSLGYGFVNYVQEADALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIP 136
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIE 181
K MT +LE++FRP+G IITSRIL D V+G +SKG+GFVRF++ E
Sbjct: 137 KSMTLHELESIFRPFGQIITSRILSDN---------VTG------LSKGVGFVRFDKKDE 181
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSPAG-RAKALAANLNAQAAAMRHFAAAMRHFG-- 238
A+ A++ LNG+IP G SE ITVKFAN+PA K + + L A A G
Sbjct: 182 ADVAIKTLNGSIPTGCSEQITVKFANNPASNNPKGILSELEAVQQAATTLVPLSTILGAP 241
Query: 239 ---------NPLHH---SARFKFAPLTA 254
P+HH +++++++P+ A
Sbjct: 242 TLRAAAGGIGPMHHTPITSKYRYSPMGA 269
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 180/380 (47%), Gaps = 73/380 (19%)
Query: 12 QSHRSTYQSDVNEQ--NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
++ + +Y N+Q SNL V+ +P++MT EL+ +F G++ + +++ D T S G
Sbjct: 111 KTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKG 170
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDL 129
GFV + + ++A+ AI LNG S +++ +K AN S PK + E L
Sbjct: 171 VGFVRFDKKDEADVAIKTLNGSIPTGCSEQIT--------VKFANNPASNNPKGILSE-L 221
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
E + + T++ S + G P + + GIG + + I +++
Sbjct: 222 EAVQQAATTLVP-------------LSTILGAPTLRAAAGGIGPMH-HTPITSKYRYS-- 265
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALA----ANLNA---------QAAAMRHFAAAM-- 234
P GA ++ A PA A + LNA AAA+ F A++
Sbjct: 266 ----PMGAITAVSQPTATLPADYLTTSALLQMSQLNALAGLTPFATAAAAVPDFTASLLA 321
Query: 235 ----------------RHFGNP------LHHSARFKFAPLTADLLNNSMLPPKSLHGSGW 272
G+P +A + + L+A + + LPP +G+
Sbjct: 322 HQQQQQAVAAQQQAQVAQAGSPPAANGAAGLAAHAQLSALSASVA--ATLPPTDT--AGY 377
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
C+FVYNLA +T+D +LWQLF FGA+ NVK++RD T KCKG+ FV M+ Y EA A+ S
Sbjct: 378 CLFVYNLAADTDDTLLWQLFSQFGAILNVKILRD-LTQKCKGYAFVSMSTYTEAYNAMVS 436
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LNG L + LQV FK+ P
Sbjct: 437 LNGTNLAGKTLQVVFKSSTP 456
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LF G +++ K+VRD T + G+GFV +A+ A+ S NG L ++ ++VS+
Sbjct: 61 LFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRAVSSFNGLRLQNKTIKVSY 117
>gi|449684824|ref|XP_002156791.2| PREDICTED: ELAV-like protein 2-like, partial [Hydra magnipapillata]
Length = 354
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 213/363 (58%), Gaps = 45/363 (12%)
Query: 17 TYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYY 76
T Q +++ +NLIVNY+PQ M++EEL+ LFSSVG +ESCKLIRDK T SLGY FVNY
Sbjct: 5 TLQFHDDDKRTNLIVNYLPQEMSEEELKTLFSSVGALESCKLIRDKVTKASLGYAFVNYQ 64
Query: 77 RTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPY 136
DA +AI L G+KL K+IKVSYARPSS IK ANLY+SGLP+ L LF+ +
Sbjct: 65 HPNDARKAIHSLQGMKLTTKTIKVSYARPSSNEIKNANLYISGLPQTCDAIRLRELFQFF 124
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE- 195
G IITS++L D+ IS+G+GFVRF++ +AE +++ LN +P
Sbjct: 125 GEIITSKVLVDENG----------------ISRGVGFVRFDKRCQAELSIEALNNKVPNL 168
Query: 196 -GASEPITVKFANSPAGRAKALAANLN-----AQAAAMRHFAAAMRHF------------ 237
A +P+ VKFAN P+ + + LN + A +++ + ++
Sbjct: 169 LNAIKPLAVKFANPPSQKMNSYIEVLNHSKNMSNAGYLQNQGFSQAYYSPLPNAVLAGVS 228
Query: 238 -GNPLHH-----SARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
GN +H+ ++ + A L NN L P++ + + WC+FVYNL + D L+QL
Sbjct: 229 NGNTVHNVTNGTNSTYNNA-LNGSGPNNLNLVPQA-NVTSWCVFVYNLPSDANDLTLFQL 286
Query: 292 FGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL-GDRLLQVSFKTH 350
F GA+ +V+V+ D + KC+G+GFV M +Y++ + AI LNGY L + LQVS K
Sbjct: 287 FSKHGAIHSVRVITDHEK-KCRGYGFVNMLHYEDTIAAIFRLNGYCLERGKPLQVSLKRS 345
Query: 351 KPL 353
K +
Sbjct: 346 KCM 348
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 158/228 (69%), Gaps = 24/228 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 36 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDA 95
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 96 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 155
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GASEPI
Sbjct: 156 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPI 200
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFK 248
TVKFAN+P+ + QA + ++ R + PLHH + RF+
Sbjct: 201 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFR 240
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 120 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 179
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL 115
+AE AI LNG K S I V +A S+ +A L
Sbjct: 180 EAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALL 217
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + ++A AI +LNG L + ++VS+
Sbjct: 60 LFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSY 116
>gi|109123517|ref|XP_001107360.1| PREDICTED: ELAV-like protein 3-like [Macaca mulatta]
gi|296232958|ref|XP_002761808.1| PREDICTED: ELAV-like protein 3 [Callithrix jacchus]
Length = 251
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 159/232 (68%), Gaps = 24/232 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 94 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D ++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILVD---------------QVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPL 252
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 199 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNL 242
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 178 EAEEAIKGLNGQK 190
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D LFG G +++ K+VRD T + G+GFV ++ ++A AI +
Sbjct: 41 LIVNYLPQNMTQDE-FKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 100 LNGLKLQTKTIKVSY 114
>gi|308464232|ref|XP_003094384.1| CRE-EXC-7 protein [Caenorhabditis remanei]
gi|308247806|gb|EFO91758.1| CRE-EXC-7 protein [Caenorhabditis remanei]
Length = 457
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 172/250 (68%), Gaps = 32/250 (12%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D+ E +NLI+NY+PQ MTQEE++ LF+S+GE+ESCKL+RDK T QSLGYGFVNY + D
Sbjct: 38 DIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEAD 97
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
A RA+ NGL+LQNK+IKVSYARPS++ IK +NLYVSG+PK MT +LE++FRP+G II
Sbjct: 98 ALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQII 157
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
TSRIL D V+G +SKG+GFVRF++ EA++A++ LNG+IP G SE
Sbjct: 158 TSRILSDN---------VTG------LSKGVGFVRFDKKDEADNAIKTLNGSIPTGCSEQ 202
Query: 201 ITVKFANSPAG-RAKALAANLNA--QAAAMR----------HFAAAMRHFGNPLHH---S 244
ITVKFAN+PA K + + L A QAA AA G P+HH +
Sbjct: 203 ITVKFANNPASNNPKGILSELEAVQQAATTLVPLSTILGAPTLRAAAGGIG-PMHHTPMT 261
Query: 245 ARFKFAPLTA 254
++++++P+ A
Sbjct: 262 SKYRYSPMGA 271
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 173/388 (44%), Gaps = 99/388 (25%)
Query: 15 RSTYQSDVNEQ--NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
+ +Y N+Q SNL V+ +P++MT EL+ +F G++ + +++ D T S G GF
Sbjct: 116 KVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGF 175
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENL 132
V + + ++A+ AI LNG S +++ +K AN S PK + E LE +
Sbjct: 176 VRFDKKDEADNAIKTLNGSIPTGCSEQIT--------VKFANNPASNNPKGILSE-LEAV 226
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
+ T++ S + G P + + GIG +
Sbjct: 227 QQAATTLVP-------------LSTILGAPTLRAAAGGIGPMHHT--------------- 258
Query: 193 IPEGASEPITVKFANSPAGRAKALA---ANLNAQ---AAAMRHFA-----AAMRHFG--- 238
P+T K+ SP G A++ A LNA +A+ + A + FG
Sbjct: 259 -------PMTSKYRYSPMGAITAVSQPTATLNADYLTTSALLQMSQLNALAGLTSFGPAT 311
Query: 239 ----------------------------------NPLHHSARFKFAPLTADLLNNSMLPP 264
N +A + + L+A + + LPP
Sbjct: 312 GVPDFTASLIAHQQQQQAVAAQQQVQQAGSPPAQNGAGLAAHAQLSALSASVA--ATLPP 369
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+G+C+FVYNLA +T+D +LWQLF FGA+ NVK++RD T KCKG+ FV M+ Y
Sbjct: 370 SDT--AGYCLFVYNLAADTDDTLLWQLFSQFGAILNVKILRD-LTQKCKGYAFVSMSTYT 426
Query: 325 EAVFAIQSLNGYALGDRLLQVSFKTHKP 352
EA A+ SLNG L + LQV FK+ P
Sbjct: 427 EAYNAMVSLNGTNLAGKTLQVVFKSSTP 454
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LF G +++ K+VRD T + G+GFV +A+ A+ S NG L ++ ++VS+
Sbjct: 63 LFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRAVSSFNGLRLQNKTIKVSY 119
>gi|355755476|gb|EHH59223.1| Hu-antigen C, partial [Macaca fascicularis]
Length = 237
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/228 (52%), Positives = 158/228 (69%), Gaps = 24/228 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 93 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 152
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 153 SRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 197
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFK 248
TVKFAN+P+ + QA + ++ R + PLHH + RF+
Sbjct: 198 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFR 237
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 177 EAEEAIKGLNGQK 189
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D LFG G +++ K+VRD T + G+GFV ++ ++A AI +
Sbjct: 40 LIVNYLPQNMTQDE-FKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 98
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 99 LNGLKLQTKTIKVSY 113
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 158/232 (68%), Gaps = 24/232 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 94 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D+ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 154 SRILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 198
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPL 252
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 199 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNL 242
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 177
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 178 EAEEAIKGLNGQK 190
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D LFG G +++ K+VRD T + G+GFV ++ ++A AI +
Sbjct: 41 LIVNYLPQNMTQDE-FKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 100 LNGLKLQTKTIKVSY 114
>gi|148693298|gb|EDL25245.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Mus musculus]
Length = 250
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 158/232 (68%), Gaps = 24/232 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IIT
Sbjct: 93 DKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 152
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
SRIL D+ +S+G+GF+RF++ IEAE A++ LNG P GA+EPI
Sbjct: 153 SRILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPI 197
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH-SARFKFAPL 252
TVKFAN+P+ + QA + ++ R + PLHH + RF+ L
Sbjct: 198 TVKFANNPSQKT--------GQALLTHLYQSSARRYAGPLHHQTQRFRLDNL 241
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 117 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 176
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 177 EAEEAIKGLNGQK 189
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D LFG G +++ K+VRD T + G+GFV ++ ++A AI +
Sbjct: 40 LIVNYLPQNMTQDE-FKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 98
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 99 LNGLKLQTKTIKVSY 113
>gi|242013287|ref|XP_002427343.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511696|gb|EEB14605.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 49/359 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+P TMTQ +LQ +F S GE+ESCKLI +K + S+GYGFV + +DA+ A+
Sbjct: 25 NNLIVNYLPDTMTQTDLQKMFESFGEIESCKLIMNKVSGHSMGYGFVKFKNHKDAQNALS 84
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
L+GL LQ+K IKVS+ARP++E IK AN+YVSGL +T+ DL N+F YG ++T +++
Sbjct: 85 NLDGLLLQHKKIKVSFARPANEPIKTANVYVSGLKNTITEADLINMFSKYGKVLTVKVMN 144
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF- 205
+ + IGFVRF +H AE+A+Q L+ T P PI V F
Sbjct: 145 NNGDGRKAMA--------------IGFVRFEKHQCAENAIQNLDQTKPLENPTPIHVSFA 190
Query: 206 ------ANSPAGRAKALAANL-----------NAQAAAMRHFAAAM--RHFG-NPLHHSA 245
ANS G ++ NA + + F A + G +P +
Sbjct: 191 RQSKESANSSPGCISSVGTMPFSGYGNTGMLNNAISKTLLPFPGAKFPHNLGKSPTFTAK 250
Query: 246 RFKFAPLTADL-------------LNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLF 292
+F PL + +N+ M P + G G+ IFV+NL+P+ ++ LW+LF
Sbjct: 251 NLRFDPLGKNASPGFRNITDGIFQINDPMYRPPA-DGKGYVIFVFNLSPDVQEVQLWRLF 309
Query: 293 GPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GPFGA+ +K+V+D +T K KGF FV M NY EA AI++LN ++LQVSFK +
Sbjct: 310 GPFGAITEIKIVQDKETKKSKGFAFVTMPNYREAEAAIRTLNLSTFEGKVLQVSFKKER 368
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA-QSLGYGFVNYYRTEDAER 83
+ +N+ V+ + T+T+ +L ++FS G+V + K++ + +++ GFV + + + AE
Sbjct: 109 KTANVYVSGLKNTITEADLINMFSKYGKVLTVKVMNNNGDGRKAMAIGFVRFEKHQCAEN 168
Query: 84 AIIELNGLK-LQNKS-IKVSYARPSSEA 109
AI L+ K L+N + I VS+AR S E+
Sbjct: 169 AIQNLDQTKPLENPTPIHVSFARQSKES 196
>gi|427782345|gb|JAA56624.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 319
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 181/343 (52%), Gaps = 35/343 (10%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
+ D +NLI+NY+PQ +T EE + LF+S+G ++S K++R K T S G+GFV+Y
Sbjct: 2 EGDGGNSQTNLIINYLPQGLTDEEFRSLFTSIGPIKSSKIVRHKATGYSYGFGFVDYQGA 61
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
DA RA+ LNGL+LQNK IKV+YARP E IK ANLY+ G+PKH E E LF +G
Sbjct: 62 GDAARAVESLNGLQLQNKKIKVAYARPGGETIKHANLYIRGIPKHFPPEQAEKLFADFGR 121
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+I R+L D N KG+ F ++ AE AM L G GA+
Sbjct: 122 LIQFRVLKDDAGQSN---------------KGVAFALYDLRENAEAAMAALTGQTLPGAT 166
Query: 199 EPITVKFANS-------PAGR---AKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFK 248
EP+ +KFA P GR + + MR A R+ NPL S ++
Sbjct: 167 EPLLIKFAEDNSKKLRPPGGRGPQGQLIGPPSAGGGGPMR--GAQGRYRYNPLTGSYQYP 224
Query: 249 FAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
+ + H +FVYN+ +T++ LWQLF +G V V ++RD
Sbjct: 225 MGGMAPAPAAADA----AGH----VLFVYNIGTDTDEKSLWQLFAQYGTVTKVNIIRDTA 276
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KGFGFV M NY + V+AI++LNG+ R LQVSFK K
Sbjct: 277 TGLSKGFGFVTMANYQDCVWAIEALNGFRYAGRPLQVSFKQPK 319
>gi|13096196|pdb|1FXL|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The C-Fos
Rna
gi|13096204|pdb|1G2E|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The Tumor
Necrosis Factor Alpha Rna
Length = 167
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 137/180 (76%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE+AI
Sbjct: 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 62
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSRIL
Sbjct: 63 TLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 122
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D++ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFA
Sbjct: 123 DQVTG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 167
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 82 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 141
Query: 80 DAERAIIELNGLK 92
+AE AI LNG K
Sbjct: 142 EAEEAIKGLNGQK 154
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 22 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 78
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQE+ +LF G I + +++ DK+ +++ G
Sbjct: 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL---------------GY 46
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 47 GFVNYIDPKDAEKAINTLNG 66
>gi|33356910|pdb|1FNX|H Chain H, Solution Structure Of The Huc Rbd1-Rbd2 Complexed With The
Au-Rich Element
Length = 174
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 140/187 (74%), Gaps = 15/187 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA++
Sbjct: 2 DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 61
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGLKLQ K+IKVSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSR
Sbjct: 62 AINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 121
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D+ +S+G+GF+RF++ IEAE A++ LNG P GA+EPITV
Sbjct: 122 ILLDQATG---------------VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITV 166
Query: 204 KFANSPA 210
KFAN+P+
Sbjct: 167 KFANNPS 173
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D LFG G +++ K+VRD T + G+GFV ++ ++A AI +
Sbjct: 7 LIVNYLPQNMTQDE-FKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 65
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 66 LNGLKLQTKTIKVSY 80
>gi|358421488|ref|XP_003584982.1| PREDICTED: eLAV (embryonic lethal, abnormal vision,
Drosophila)-like 2 (Hu antigen B)-like, partial [Bos
taurus]
Length = 224
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 157/246 (63%), Gaps = 38/246 (15%)
Query: 100 VSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
VSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IITSRIL D++
Sbjct: 1 VSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG-------- 52
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
IS+G+GF+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+ +
Sbjct: 53 -------ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN----- 100
Query: 220 LNAQAAAMRHFAAAMRHFGNPLHHSA-RFK-------------FAPLTADLLNNSMLPPK 265
QA + + + R + PL A RF+ F+P+T D + +
Sbjct: 101 ---QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINI 157
Query: 266 SLH-GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
H G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNYD
Sbjct: 158 PGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYD 217
Query: 325 EAVFAI 330
EA AI
Sbjct: 218 EAAMAI 223
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 7 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 66
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRANL----------YVSGLPKHMTQE 127
+AE AI LNG K + I V +A S+ +A L Y L + +
Sbjct: 67 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 126
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S + D M S
Sbjct: 127 RLDNLLNMAYGVKRFSPMTIDGMTS 151
>gi|341871451|gb|AEK99643.1| ElaV [Pomatoceros lamarckii]
Length = 212
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 152/224 (67%), Gaps = 26/224 (11%)
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
+ AE+A+ LNGL+LQNK+IKVS+ARPS E IK ANLY+SG+PK MTQ DL+ LF G
Sbjct: 4 DGAEKAVKNLNGLRLQNKTIKVSHARPSCENIKGANLYISGIPKTMTQADLDTLFAKCGN 63
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
IIT+RILCD ISKG+GF+RF+Q EAE A++ LNGTIPEGA+
Sbjct: 64 IITTRILCDAQTG---------------ISKGVGFIRFDQRFEAERAIKMLNGTIPEGAT 108
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHF-------AAAMRHFG--NPLHHSA-RFK 248
EPITVKFANSP+ ++ A AAM + AAA + G P+HH A RF+
Sbjct: 109 EPITVKFANSPSSTKASMIAGTPTVTAAMASYLTAPQSTAAAQQARGLLGPIHHPANRFR 168
Query: 249 FAPLTADLLNNS-MLPPKSLHGSGWCIFVYNLAPETEDNVLWQL 291
F+PL +++ NS ++ ++ G+GWCIFVYNLAPETE+NVLWQL
Sbjct: 169 FSPLDGNMVANSNLMTGNTMSGAGWCIFVYNLAPETEENVLWQL 212
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N + +NL ++ +P+TMTQ +L LF+ G + + +++ D T S G GF+ + + +AE
Sbjct: 34 NIKGANLYISGIPKTMTQADLDTLFAKCGNIITTRILCDAQTGISKGVGFIRFDQRFEAE 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP 121
RAI LNG + + ++ +S + +A++ ++G P
Sbjct: 94 RAIKMLNGTIPEGATEPITVKFANSPSSTKASM-IAGTP 131
>gi|156536405|gb|ABU80357.1| embryonic lethal abnormal vision [Drosophila montana]
Length = 346
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 116 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 175
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 176 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 235
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 236 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 281
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 282 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 332
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 333 KGLARFSPMAGDML 346
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 121 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 180
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 181 VRPQDAEQAVNVLNGLRLQNKTIKVSF 207
>gi|156536403|gb|ABU80356.1| embryonic lethal abnormal vision [Drosophila littoralis]
Length = 334
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 104 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 163
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 164 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 223
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 224 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 269
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 270 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 320
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 321 KGLARFSPMAGDML 334
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 109 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 168
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 169 VRPQDAEQAVNVLNGLRLQNKTIKVSF 195
>gi|57231478|gb|AAW47452.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 104 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 163
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 164 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 223
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 224 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 269
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 270 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 320
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 321 KGLARFSPMAGDML 334
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 109 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 168
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 169 VRPQDAEQAVNVLNGLRLQNKTIKVSF 195
>gi|57231504|gb|AAW47465.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 104 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 163
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 164 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 223
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 224 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 269
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 270 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 320
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 321 KGLARFSPMAGDML 334
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 109 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 168
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 169 VRPQDAEQAVNVLNGLRLQNKTIKVSF 195
>gi|57231496|gb|AAW47461.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 333
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 103 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 162
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 163 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 222
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 223 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 268
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 269 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 319
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 320 KGLARFSPMAGDML 333
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 108 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 167
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 168 VRPQDAEQAVNVLNGLRLQNKTIKVSF 194
>gi|57231470|gb|AAW47448.1| embryonic lethal abnormal vision protein [Drosophila virilis]
Length = 345
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 115 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 174
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 175 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 234
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 235 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 280
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 281 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 331
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 332 KGLARFSPMAGDML 345
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 120 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 179
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 180 VRPQDAEQAVNVLNGLRLQNKTIKVSF 206
>gi|57231538|gb|AAW47482.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 340
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 110 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 169
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 170 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 229
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 230 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 275
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 276 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 326
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 327 KGLARFSPMAGDML 340
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 115 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 174
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 175 VRPQDAEQAVNVLNGLRLQNKTIKVSF 201
>gi|57231546|gb|AAW47486.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 326
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 215
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 216 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 261
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 262 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 312
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 313 KGLARFSPMAGDML 326
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 101 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 160
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 161 VRPQDAEQAVNVLNGLRLQNKTIKVSF 187
>gi|57231572|gb|AAW47499.1| embryonic lethal abnormal vision protein [Drosophila ezoana]
Length = 343
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 113 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 172
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 173 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 232
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 233 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 278
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 279 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 329
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 330 KGLARFSPMAGDML 343
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 118 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 177
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 178 VRPQDAEQAVNVLNGLRLQNKTIKVSF 204
>gi|57231474|gb|AAW47450.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231476|gb|AAW47451.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231480|gb|AAW47453.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231484|gb|AAW47455.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231486|gb|AAW47456.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231488|gb|AAW47457.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231490|gb|AAW47458.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231492|gb|AAW47459.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231494|gb|AAW47460.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231498|gb|AAW47462.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231500|gb|AAW47463.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231502|gb|AAW47464.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231506|gb|AAW47466.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231508|gb|AAW47467.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231510|gb|AAW47468.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231514|gb|AAW47470.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231516|gb|AAW47471.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231518|gb|AAW47472.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231520|gb|AAW47473.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231522|gb|AAW47474.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231524|gb|AAW47475.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231526|gb|AAW47476.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231530|gb|AAW47478.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231532|gb|AAW47479.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231534|gb|AAW47480.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231540|gb|AAW47483.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231542|gb|AAW47484.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231544|gb|AAW47485.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231548|gb|AAW47487.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231550|gb|AAW47488.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231552|gb|AAW47489.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231554|gb|AAW47490.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231556|gb|AAW47491.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231560|gb|AAW47493.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231562|gb|AAW47494.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231564|gb|AAW47495.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231568|gb|AAW47497.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 337
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 107 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 166
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 167 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 226
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 227 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 272
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 273 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 323
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 324 KGLARFSPMAGDML 337
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 112 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 171
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 172 VRPQDAEQAVNVLNGLRLQNKTIKVSF 198
>gi|57231472|gb|AAW47449.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231482|gb|AAW47454.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231512|gb|AAW47469.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231528|gb|AAW47477.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231536|gb|AAW47481.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231558|gb|AAW47492.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231566|gb|AAW47496.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231570|gb|AAW47498.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 338
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 163/254 (64%), Gaps = 43/254 (16%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-------------TAQSLGY 70
E +NLIVNY+PQTMT++E++ LFSSVGE+ES KLIRDK+ QSLGY
Sbjct: 108 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 167
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R +DAE+A+ LNGL+LQNK+IKVS+ARPSS+AIK ANLYVSGLPK MTQ++LE
Sbjct: 168 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 227
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F P+G IITSRIL + A + + +KG+GF+RF++ EA A+ LN
Sbjct: 228 AIFAPFGAIITSRILQN--AGNDTQ------------TKGVGFIRFDKREEATRAIIALN 273
Query: 191 GTIPEGASEPITVKFANSPAGRAK----ALAANLNAQAAAMRHFAAAMRHFGNPLH---H 243
GT P ++PI VKF+N+P +K L A LN Q +R G +H +
Sbjct: 274 GTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ---------LVRRIGGAMHTPVN 324
Query: 244 SARFKFAPLTADLL 257
+F+P+ D+L
Sbjct: 325 KGLARFSPMAGDML 338
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRD-------------PQTYKCKGFGFVCM 320
+ N P+T ++ + LF G +++VK++RD P + G+GFV
Sbjct: 113 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 172
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSF 347
+A A+ LNG L ++ ++VSF
Sbjct: 173 VRPQDAEQAVNVLNGLRLQNKTIKVSF 199
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 192/335 (57%), Gaps = 21/335 (6%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D E +NLI+NY+P ++T+ +L+ LF G +++ K++ D+ T +SLGYGFV + E
Sbjct: 77 ADTPEPRNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAE 136
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+A RAI +NG + NK +KVS ARPSS +I ANLY+ LP+ +T++ L +F P+G I
Sbjct: 137 EAARAIQAMNGRQYMNKRLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEI 196
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
I++R+L D + KGI FVRF++ AE A+ ELN T+P S+
Sbjct: 197 ISARLLYDG-----------------DVPKGIAFVRFDKRACAERAVAELNNTVPANCSQ 239
Query: 200 PITVKFANS-PAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADL-- 256
PI VKFA++ RA + ++ Q + M + + M + G + APL
Sbjct: 240 PIAVKFADTNRRSRAPSGSSAGMHQGSMMAYPSMPMPYGGGFQQPQPQPTMAPLQPGFVP 299
Query: 257 LNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
++ MLPP + G+C+FV+NL P +++ +LF FG V + + R + + +G
Sbjct: 300 MSPDMLPPSARTPYGYCLFVFNLPPFMDEDGFARLFANFGGVVSASISRK-SLSQARRYG 358
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FV M ++ EA AIQ+LN Y + L VSFK+++
Sbjct: 359 FVTMRDFGEAATAIQNLNDYDVFGYRLSVSFKSNR 393
>gi|167523433|ref|XP_001746053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775324|gb|EDQ88948.1| predicted protein [Monosiga brevicollis MX1]
Length = 635
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 186/355 (52%), Gaps = 58/355 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+P + +Q++L+ LF + G ++SCKL+ D+ T +SLGYGFV Y A +A
Sbjct: 188 TNLIINYIPNSFSQDDLRALFGAYGALKSCKLMYDRATGKSLGYGFVEYEDENGATKAAD 247
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LN +++NK +KVS+ARPSS I ANLY+ GLP + ++ L ++F G II+ R+L
Sbjct: 248 ALNEFQIENKRLKVSFARPSSSTITNANLYIKGLPTTINEQSLTDMFSSCGDIISVRVLY 307
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +GTP KG+GFVRF+QH EAE+A+Q N PEG + P+ VKFA
Sbjct: 308 DR----------NGTP------KGVGFVRFDQHKEAENAIQRFNNVTPEGCTTPLVVKFA 351
Query: 207 NSPAGRAKALAANLNAQAAAMRHFAAAMRHFGN--PLHHSARFKFAPLTA---------- 254
++ AK+ AA A H A M H+G P H P A
Sbjct: 352 DN----AKSRAA-----APPPPHVQATMNHYGGFMPYHPPTSPPAQPFAARMSMQAPNQP 402
Query: 255 ---------------------DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFG 293
D + M+PP ++ G C+FVYNL P + L L G
Sbjct: 403 QAQPQPQPQPMPPHPLGSMAPDEGHLGMIPPSAISDQGICLFVYNLPPACTEQDLTALVG 462
Query: 294 PFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
+G V++ +VR +T KG+ F+ + +A I++LN R LQVSFK
Sbjct: 463 QYGNVRSASIVRYKETGSSKGYAFITVATNADATNVIRNLNNMRYNGRDLQVSFK 517
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S +++Q L V +P T+++L L G V S ++R K T S GY F+
Sbjct: 434 SAISDQGICLFVYNLPPACTEQDLTALVGQYGNVRSASIVRYKETGSSKGYAFITVATNA 493
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEA--IKRANLYVSGLPKHMTQEDLENLFRP-- 135
DA I LN ++ + ++VS+ + S N++ + H D+ + P
Sbjct: 494 DATNVIRNLNNMRYNGRDLQVSFKKQSRRPAHADMGNMHAGHVLPHAGPRDMSYMHMPLD 553
Query: 136 --YGTI 139
YG++
Sbjct: 554 AGYGSL 559
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N+NL + +P T+ ++ L +FSS G++ S +++ D+ G GFV + + ++AE AI
Sbjct: 273 NANLYIKGLPTTINEQSLTDMFSSCGDIISVRVLYDRNGTPK-GVGFVRFDQHKEAENAI 331
Query: 86 IELN 89
N
Sbjct: 332 QRFN 335
>gi|395750501|ref|XP_002828742.2| PREDICTED: ELAV-like protein 3 [Pongo abelii]
Length = 275
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/266 (49%), Positives = 167/266 (62%), Gaps = 30/266 (11%)
Query: 99 KVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFV 158
+VSYARPSS +I+ ANLYVSGLPK M+Q+++E LF YG IITSRIL D+ V
Sbjct: 23 RVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQ---------V 73
Query: 159 SGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANS---PAGRAKA 215
+G +S+G+GF+RF++ IEAE + Q LNG P A +FAN+ P +
Sbjct: 74 TG------VSRGVGFIRFDKRIEAE-SYQGLNGQKPL-AQLSHHSQFANTRMAPGRVPPS 125
Query: 216 LAANLNAQAAAMRHFAAAMRH-------FGNPLHHSARFK-FAPLTADLLNN--SMLPPK 265
L +LN A R H N L+ + K F+P+ D ++ +
Sbjct: 126 LQPSLNPIPAEGRDAGRVRTHGSQGAYLLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSG 185
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
G+GWCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDE
Sbjct: 186 GAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDE 245
Query: 326 AVFAIQSLNGYALGDRLLQVSFKTHK 351
A AI SLNGY LG+R+LQVSFKT K
Sbjct: 246 AAMAIASLNGYRLGERVLQVSFKTSK 271
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 30 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 89
Query: 80 DAERAIIELNGLK 92
+AE + LNG K
Sbjct: 90 EAE-SYQGLNGQK 101
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 195 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 253
Query: 89 NGLKLQNKSIKVSY 102
NG +L + ++VS+
Sbjct: 254 NGYRLGERVLQVSF 267
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
Length = 177
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 132/180 (73%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 3 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 62
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 63 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 122
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA
Sbjct: 123 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 167
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 87 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 146
Query: 85 IIELNGLK 92
I NG K
Sbjct: 147 ITSFNGHK 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++ G
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL---------------GY 46
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 47 GFVNYVTAKDAERAINTLNG 66
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 271 GWCIFVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
G + N P+ T+D L LF G V++ K++RD G+GFV +A
Sbjct: 1 GRTNLIVNYLPQNMTQDE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 59
Query: 329 AIQSLNGYALGDRLLQVSF 347
AI +LNG L + ++VS+
Sbjct: 60 AINTLNGLRLQSKTIKVSY 78
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 147/214 (68%), Gaps = 20/214 (9%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+P M+QEE++ LFSS+GEVESCKL+R+KT+ +SLGY FV +Y DA +
Sbjct: 117 ENKTNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPLDAGK 176
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL+LQNK++KVS ARPSSEAIK ANLY+ GLP+ MTQ +LE LF G IIT+R
Sbjct: 177 AIKTLNGLRLQNKTVKVSLARPSSEAIKGANLYICGLPRKMTQPELEKLFSACGHIITAR 236
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D +S+G+ F+R++Q EAE A+++LNG +P GASEPITV
Sbjct: 237 ILYDTKTG---------------LSRGVAFIRYDQRTEAEAAIRKLNGYLPPGASEPITV 281
Query: 204 KFANSPAGRAKALAANL----NAQAAAMRHFAAA 233
KFANSP+ +A NL +A M FA +
Sbjct: 282 KFANSPSSN-RAENMNLGFMKSADGDTMSRFAPS 314
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 74/84 (88%)
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
+L +GWCIFVYNLAP+TE++ LWQLFGPFGAVQ VKV+RDP T KCKGFGFV M+NY+E
Sbjct: 524 ALTATGWCIFVYNLAPDTEESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEE 583
Query: 326 AVFAIQSLNGYALGDRLLQVSFKT 349
A+ AI SLNG+ LG+R+LQVSFKT
Sbjct: 584 ALLAIHSLNGFNLGNRVLQVSFKT 607
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P T + L LF G V++ K+IRD T++ G+GFV E+A AI L
Sbjct: 533 FVYNLAPDT-EESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEEALLAIHSL 591
Query: 89 NGLKLQNKSIKVSY-ARPSSEAIK 111
NG L N+ ++VS+ P+S+ +K
Sbjct: 592 NGFNLGNRVLQVSFKTTPNSKHMK 615
>gi|195576197|ref|XP_002077963.1| GD23195 [Drosophila simulans]
gi|194189972|gb|EDX03548.1| GD23195 [Drosophila simulans]
Length = 464
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/159 (66%), Positives = 125/159 (78%), Gaps = 10/159 (6%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTM+Q+E++ LF S GEVESCKLIRDK T QSLGYGFVNY + EDAE+AI
Sbjct: 315 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 374
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQNK+IKVS ARPSSE+IK ANLYVSGLPK+MTQ DLE+LF PYG IITSRILC
Sbjct: 375 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILC 434
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
D + E+ +SKG+GF+RF+Q EA+
Sbjct: 435 DNITDEHAAG----------LSKGVGFIRFDQRFEADRG 463
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+T + + LF FG V++ K++RD T + G+GFV ++A AI +L
Sbjct: 317 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 376
Query: 334 NGYALGDRLLQVSF 347
NG L ++ ++VS
Sbjct: 377 NGLRLQNKTIKVSI 390
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
E + NL V+ LP+ M+Q+++ +LF +G + + +++ DK+ +++
Sbjct: 310 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSL------------- 356
Query: 168 SKGIGFVRFNQHIEAEHAMQELNG 191
G GFV + + +AE A+ LNG
Sbjct: 357 --GYGFVNYVKQEDAEKAINALNG 378
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs Of
Human Antigen R
Length = 177
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 131/180 (72%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 3 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 62
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 63 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 122
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ +S+G+ F+RF++ EAE A+ NG P G+SEPITV FA
Sbjct: 123 DQTTG---------------LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVXFA 167
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TT S G F+ + + +AE A
Sbjct: 87 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 146
Query: 85 IIELNGLK 92
I NG K
Sbjct: 147 ITSFNGHK 154
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++ G
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL---------------GY 46
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 47 GFVNYVTAKDAERAINTLNG 66
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 271 GWCIFVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
G + N P+ T+D L LF G V++ K++RD G+GFV +A
Sbjct: 1 GRTNLIVNYLPQNMTQDE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 59
Query: 329 AIQSLNGYALGDRLLQVSF 347
AI +LNG L + ++VS+
Sbjct: 60 AINTLNGLRLQSKTIKVSY 78
>gi|197247132|gb|AAI65930.1| Hug protein [Danio rerio]
Length = 219
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 152/229 (66%), Gaps = 25/229 (10%)
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
MTQ+++E++F YG II SRIL D+ + +S+G+ F+RF++ EAE
Sbjct: 12 MTQKNVEDMFTQYGRIINSRILVDQASG---------------LSRGVAFIRFDKRSEAE 56
Query: 184 HAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
A+++LNG+ P GASEPITVKFA +P + N+Q + + + R FG P+HH
Sbjct: 57 EAIKDLNGSKPSGASEPITVKFAANPN-------QSKNSQLLSQLYHTQS-RRFGGPVHH 108
Query: 244 S-ARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
RF+F+P++ D +SM S SGWCIFVYNL + ++ +LWQ+FGPFGAV NVK
Sbjct: 109 QPQRFRFSPMSVDHSVSSMNVASSSS-SGWCIFVYNLGQDADEGILWQMFGPFGAVTNVK 167
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFK+ K
Sbjct: 168 VIRDFNTSKCKGFGFVTMTNYEEAAMAISSLNGYRLGDKVLQVSFKSSK 216
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ V + Q + L +F G V + K+IRD T++ G+GFV E+A AI L
Sbjct: 139 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSL 198
Query: 89 NGLKLQNKSIKVSYARPSS 107
NG +L +K ++VS+ S
Sbjct: 199 NGYRLGDKVLQVSFKSSKS 217
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 37 TMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNK 96
TMTQ+ ++ +F+ G + + +++ D+ + S G F+ + + +AE AI +LNG K
Sbjct: 11 TMTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGSKPSGA 70
Query: 97 S--IKVSYA 103
S I V +A
Sbjct: 71 SEPITVKFA 79
>gi|195546808|ref|NP_001091837.2| Elav protein [Bombyx mori]
gi|195542256|gb|ABM21482.2| ELAV [Bombyx mori]
Length = 301
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 179/334 (53%), Gaps = 59/334 (17%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E + LIVNY+P+ MTQ+ + LFS++G++ESCKLI ++ GYGFV Y R +DA +
Sbjct: 20 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVK 73
Query: 84 AIIELNGLKLQNKSIKVSYA------RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
A NGL +QNK++KVS+A +P ++ NLY+ LP +T + L LF +G
Sbjct: 74 ARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQGLHGLFAQFG 133
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
II SR I+ GI FV + EAE A+Q +NG+ P G
Sbjct: 134 RIINSR-----------------------IAAGIAFVLYEHQYEAERAIQNINGSTPPGF 170
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
P+TVK+AN N + +R + + H H++
Sbjct: 171 LHPLTVKYANKSNPHKHKNNNNTFTKNTIVRPY-QWINHISAVGEHNS------------ 217
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
P + W I++YN+A E E+ LWQLFGP+GA+ +VK++RD QT K KG+GF
Sbjct: 218 ------PNT-----WSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 266
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V M NYD+A AIQ+LNGY L + L VSFKT K
Sbjct: 267 VTMRNYDQAAMAIQALNGYLLHGQPLSVSFKTQK 300
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 20 SDVNEQNS----NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
S V E NS ++ + + + + L LF G + S K+IRD T +S GYGFV
Sbjct: 210 SAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTM 269
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSY 102
+ A AI LNG L + + VS+
Sbjct: 270 RNYDQAAMAIQALNGYLLHGQPLSVSF 296
>gi|28277433|gb|AAH45277.1| Hug protein [Danio rerio]
Length = 208
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 151/229 (65%), Gaps = 25/229 (10%)
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
MTQ+++E++F YG II SRIL D+ + +S+G+ F+RF++ EAE
Sbjct: 1 MTQKNVEDMFTQYGRIINSRILVDQASG---------------LSRGVAFIRFDKRSEAE 45
Query: 184 HAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
A+ +LNG+ P GASEPITVKFA +P + N+Q + + + R FG P+HH
Sbjct: 46 EAIIDLNGSKPSGASEPITVKFAANPN-------QSKNSQLLSQLYHTQS-RRFGGPVHH 97
Query: 244 S-ARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
RF+F+P++ D +SM S SGWCIFVYNL + ++ +LWQ+FGPFGAV NVK
Sbjct: 98 QPQRFRFSPMSVDHSVSSMNVASSSS-SGWCIFVYNLGQDADEGILWQMFGPFGAVTNVK 156
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+RD T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFK+ K
Sbjct: 157 VIRDFNTSKCKGFGFVTMTNYEEAAMAISSLNGYRLGDKVLQVSFKSSK 205
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ V + Q + L +F G V + K+IRD T++ G+GFV E+A AI L
Sbjct: 128 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSL 187
Query: 89 NGLKLQNKSIKVSYARPSS 107
NG +L +K ++VS+ S
Sbjct: 188 NGYRLGDKVLQVSFKSSKS 206
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQ+ ++ +F+ G + + +++ D+ + S G F+ + + +AE AII+LNG K S
Sbjct: 1 MTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIIDLNGSKPSGAS 60
Query: 98 --IKVSYA 103
I V +A
Sbjct: 61 EPITVKFA 68
>gi|431900165|gb|ELK08079.1| ELAV-like protein 1 [Pteropus alecto]
Length = 401
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 194/345 (56%), Gaps = 60/345 (17%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TTA E
Sbjct: 96 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTA---------------VEAQ 140
Query: 85 IIELNGLKLQN-KSIKVSYARPSSEAIKRANLYVSGL--PKHMTQEDLENLFRPYGTIIT 141
I GL L+ S+ AR SG+ H+ L+ + P I+
Sbjct: 141 IGACRGLALRGADSLHFPEARGEG---------TSGVLSESHIQAPTLQ--WAPGAEIV- 188
Query: 142 SRILCDKMASENVRSF----------VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+ D +AS NV SF +S T +S+G+ F+RF++ EAE A+ NG
Sbjct: 189 ---MEDAIAS-NVASFEIGFRWCLFGMSVTKISFGLSRGVAFIRFDKRSEAEEAITSFNG 244
Query: 192 TIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHSA-RFKF 249
P G+SEPITVKFA +P N N A + + + R FG P+HH A RF+F
Sbjct: 245 HKPPGSSEPITVKFAANP---------NQNKNVALLSQLYHSPARRFGGPVHHQAQRFRF 295
Query: 250 APLTADLLNNSMLPPKSLHG---SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
+P+ D + S L ++ G SGWCIF+YNL + ++ +LWQ+FGPFGAV NVKV+RD
Sbjct: 296 SPMGVDHM--SGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 353
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNY+EA AI SLNGY LGD++LQVSFKT+K
Sbjct: 354 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 398
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 102/122 (83%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 12 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 71
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 72 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 131
Query: 147 DK 148
D+
Sbjct: 132 DQ 133
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 2 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL-------- 53
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 54 -------GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 88
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D L LF G V++ K++RD G+GFV +A AI +
Sbjct: 14 LIVNYLPQNMTQDE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 72
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 73 LNGLRLQSKTIKVSY 87
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 190/349 (54%), Gaps = 23/349 (6%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
Y+ H + ++++ N+NLIVNY+PQT++ E+ + LF +G ++S K++RDK T
Sbjct: 171 FYDLFFFHHGLKRRNMSDPNTNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNY 230
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
S G+GFV+Y EDAERAI E+NG K+ +K+IKVSYAR + K AN+Y++ +P+ +
Sbjct: 231 SYGFGFVDYVNEEDAERAIHEMNGQKMDHKTIKVSYARKNDSESKGANIYIANIPRSFGE 290
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E+L FR +G II R+L DK +E SKG+GFV + + EA A+
Sbjct: 291 EELGAHFRQFGEIIQVRLLRDKSTNE---------------SKGVGFVYYTKRSEAAAAL 335
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLH---- 242
+ +NG +++KFA+ A + +A + Q +R+ +G H
Sbjct: 336 EAMNGKTLLKGYPALSIKFADINARKGRA-PYQIQVQ-TNLRYPTPGSNPYGGGPHGPMR 393
Query: 243 -HSARFKFAPLTADLL-NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQN 300
+ R +F P++ + G +FVYN+ + E+ LWQLF P G V
Sbjct: 394 STNTRMRFNPMSGNYSPGVGGGGGGGGDMGGQILFVYNIGYDAEEKTLWQLFAPLGTVTK 453
Query: 301 VKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKT 349
V V+ D +CKG+GFV M + EA AI +LNG +R L VSFK+
Sbjct: 454 VNVIMDHVRNQCKGYGFVTMKHLHEAEGAILALNGAMYNNRRLSVSFKS 502
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
M ++M + T ++D + +N+ + +P++ +EEL F GE+ +L+RD
Sbjct: 252 MNGQKMDHKTIKVSYARKNDSESKGANIYIANIPRSFGEEELGAHFRQFGEIIQVRLLRD 311
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKL 93
K+T +S G GFV Y + +A A+ +NG L
Sbjct: 312 KSTNESKGVGFVYYTKRSEAAAALEAMNGKTL 343
>gi|221104585|ref|XP_002169901.1| PREDICTED: ELAV-like protein 2-like [Hydra magnipapillata]
Length = 339
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 189/333 (56%), Gaps = 56/333 (16%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
NLIVNY+PQT TQ+E+ +F+ +G V +CKLIR+ TT QSLGY F+ Y + AE AI +
Sbjct: 15 NLIVNYLPQTFTQDEVSQMFARIGPVSNCKLIRNYTTGQSLGYAFIEYPTAQLAEEAINQ 74
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
L+G+ LQ+K +KVSYARPSS IK +N+YV+GLP + ++ L +LF P+G+IIT +IL D
Sbjct: 75 LDGMTLQDKKLKVSYARPSSTEIKNSNVYVAGLPSWVDEDRLLSLFAPFGSIITHKILTD 134
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN 207
+ S+G+GFVR++ +AE A++ + G + ++ + VK A
Sbjct: 135 AASK----------------SRGVGFVRYSLKSDAEKAIESMAGKVLPDSTTALIVKLAI 178
Query: 208 SPAGR----AKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
PA + A A A LN+ A + ++ P++ L+N
Sbjct: 179 PPASKQLAAAAAAAQPLNSIAGVPKQIV----------------QYNPMS---LSNP--- 216
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD---PQTYKCKGFGFVCM 320
++VY L P + L++LF PFG + NVK++RD P+ CKG+GFV
Sbjct: 217 ----------VYVYGLQPHHSELTLYELFAPFGGILNVKLIRDNAKPEK-PCKGYGFVNF 265
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
DEA+ AI +++ + ++LQVSFK +K L
Sbjct: 266 RKQDEALAAIATMHNHPYDGKILQVSFKQNKQL 298
>gi|221121672|ref|XP_002156905.1| PREDICTED: ELAV-like protein 2-like [Hydra magnipapillata]
Length = 339
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 189/333 (56%), Gaps = 56/333 (16%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
NLIVNY+PQT TQ+E+ +F+ +G V +CKLIR+ TT QSLGY F+ Y + AE AI +
Sbjct: 15 NLIVNYLPQTFTQDEVSQMFARIGPVSNCKLIRNYTTGQSLGYAFIEYPTAQLAEDAINQ 74
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
L+G+ LQ+K +KVSYARPSS IK +N+YV+GLP + ++ L +LF P+G+IIT +IL D
Sbjct: 75 LDGMTLQDKKLKVSYARPSSTEIKNSNVYVAGLPSWVDEDRLLSLFAPFGSIITHKILTD 134
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN 207
+ S+G+GFVR++ +AE A++ + G + ++ + VK A
Sbjct: 135 AASK----------------SRGVGFVRYSLKSDAEKAIESMAGKVLPDSTTALIVKLAI 178
Query: 208 SPAGR----AKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
PA + A A A LN+ A + ++ P++ L+N
Sbjct: 179 PPASKQLAAAAAAAQPLNSIAGVPKQIV----------------QYNPMS---LSNP--- 216
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD---PQTYKCKGFGFVCM 320
++VY L P + L++LF PFG + NVK++RD P+ CKG+GFV
Sbjct: 217 ----------VYVYGLQPHHSELTLYELFAPFGGILNVKLIRDNAKPEK-PCKGYGFVNF 265
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
DEA+ AI +++ + ++LQVSFK +K L
Sbjct: 266 RKQDEALAAIATMHNHPYDGKILQVSFKQNKQL 298
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 45/222 (20%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+NSN+ V +P + ++ L LF+ G + + K++ D ++S G GFV Y DAE+A
Sbjct: 98 KNSNVYVAGLPSWVDEDRLLSLFAPFGSIITHKILTD-AASKSRGVGFVRYSLKSDAEKA 156
Query: 85 IIELNGLKLQNKS--IKVSYARPSS---------------------EAIKRAN------- 114
I + G L + + + V A P + + I + N
Sbjct: 157 IESMAGKVLPDSTTALIVKLAIPPASKQLAAAAAAAQPLNSIAGVPKQIVQYNPMSLSNP 216
Query: 115 LYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFV 174
+YV GL H ++ L LF P+G I+ +++ D + PE P KG GFV
Sbjct: 217 VYVYGLQPHHSELTLYELFAPFGGILNVKLIRD-----------NAKPEKP--CKGYGFV 263
Query: 175 RFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
F + EA A+ ++ +G ++ K N G+A A+
Sbjct: 264 NFRKQDEALAAIATMHNHPYDGKILQVSFK-QNKQLGQATAM 304
>gi|357626334|gb|EHJ76460.1| hypothetical protein KGM_20562 [Danaus plexippus]
Length = 966
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 176/330 (53%), Gaps = 59/330 (17%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
+E + LIVNY+P+ MTQ+ + LFS++G++ESCKLI ++ GYGFV Y EDA
Sbjct: 19 DESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYCHPEDAV 72
Query: 83 RAIIELNGLKLQNKSIKVSYA------RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPY 136
+A NGL +QNK++KVS+A +P ++ NLYV LP +T +DL LF +
Sbjct: 73 KARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYVCNLPNELTLQDLHGLFAQF 132
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
G I+ SR I+ GI FV + EAE A+ +NGT P
Sbjct: 133 GKIVNSR-----------------------IASGIAFVLYEHQYEAERAIHNVNGTTPPS 169
Query: 197 ASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADL 256
P+TVK+AN N ++ + ++ + + H G H++
Sbjct: 170 FLHPLTVKYANKSNPNKHKNNNNNFSKNSLVKPY-HWINHVGAIGDHNS----------- 217
Query: 257 LNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
S W I++YN+APE E+ LWQLFGP+GA+ +VK+++D QT K KGFG
Sbjct: 218 ------------PSTWSIYIYNIAPEVEELTLWQLFGPYGAIVSVKIIKDHQTNKSKGFG 265
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVS 346
FV M NYD+A AIQ+LNGY L + L S
Sbjct: 266 FVTMRNYDQAAMAIQALNGYVLHGQPLSYS 295
>gi|357626291|gb|EHJ76427.1| putative ELAV-like protein 1 [Danaus plexippus]
Length = 370
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 196/391 (50%), Gaps = 90/391 (23%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
++ N + L+VNY+P+ MT++ + LFS++G++ESCKLI ++ GYGFV Y + E
Sbjct: 8 ANSNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHE 61
Query: 80 DAERAIIELNGLKLQNKSIKVSYA------RPSSEAIKRANLYVSGLPKHMTQEDLENLF 133
DAE+A NGL +Q K++KVS+A + S + +NLY+S LP MT E L LF
Sbjct: 62 DAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNMLF 121
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+G I SR +S+GIGFV + +AE A+ +NG
Sbjct: 122 GQFGNITNSR-----------------------VSQGIGFVCYETRQQAEDAITHMNGQS 158
Query: 194 PEGASEPITVKFANSPAG---------RAKALAANL--NAQAAAMRHFAAA-----MRHF 237
P + I VKFAN P+ R AA L N AA A + F
Sbjct: 159 PIPGAGAIVVKFANKPSANKNAPRPIQRVGVSAAPLAYNGAAAVFNGSTPAFNGTNLSAF 218
Query: 238 GN--------------------------PLHHSARFKFAPLTADLLNNSMLP-------P 264
G P + + +F P+ A N+S LP P
Sbjct: 219 GARPATAFAPGFPQASPPPLLPSPGKALPFINKGQQRFNPMAAT--NHSPLPLLGAPASP 276
Query: 265 KSLHGSGWC----IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
L G+ ++VYN+ +TE+ LWQLFGP+GA+ ++KV++DP+T K KGF FV M
Sbjct: 277 VPLLGAPAAPQTTVYVYNVGEDTEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNM 336
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
YDEA AIQ+LNGY L ++L VSFKT K
Sbjct: 337 REYDEAAMAIQALNGYTLNGQVLSVSFKTQK 367
>gi|391333252|ref|XP_003741033.1| PREDICTED: ELAV-like protein 2-like [Metaseiulus occidentalis]
Length = 409
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 185/356 (51%), Gaps = 58/356 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
SNLIVNY+PQ ++ +E LF +G +++CK++R+K T S G+GFV+Y+ EDA++AI
Sbjct: 16 SNLIVNYLPQKLSDQEFYDLFGQIGRIKTCKIVRNKLTGYSYGFGFVDYHDPEDAKKAIG 75
Query: 87 ELNGLKLQNKSIKVSYARPS-SEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
NG K+ NK++KV+ A+PS S K N+Y+ G+PK+ ++LENLF +G ++ R+L
Sbjct: 76 VYNGFKMNNKTLKVAIAKPSNSNHSKNTNVYIRGVPKNFDPDELENLFGTFGRLVQFRVL 135
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
D S NV +KG+ F ++ A+ A+Q+++G G +EP+ VK
Sbjct: 136 RD--LSTNV-------------NKGVAFALYDDKENADRAIQDMDGKTLNGGTEPLQVKI 180
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF--------KFAPLTADLL 257
A+ K M + +R G P+H + +F P+ +
Sbjct: 181 ADDQMKLKK---------HRQMTSYEQQIRA-GGPMHGRPPYVNNFRPNHRFNPMNKNGP 230
Query: 258 NNSMLPPKSLHGSGW------------------------CIFVYNLAPETEDNVLWQLFG 293
+ +G G +FVYN+ ET+D L QLF
Sbjct: 231 GGFQIGQPGGYGHGSQNVGGGGAGIGGGGGYDQAPVGPPILFVYNIGMETDDPSLVQLFS 290
Query: 294 PFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKT 349
+G V+ VVRD T K KG+GFV M NY+EA++AI LNG+ + LQVSFKT
Sbjct: 291 QYGTVEKAAVVRDKMTTKSKGYGFVTMPNYNEALWAIDQLNGFQYAGKPLQVSFKT 346
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+N+N+ + VP+ +EL++LF + G + +++RD +T + G F Y E+A+RA
Sbjct: 101 KNTNVYIRGVPKNFDPDELENLFGTFGRLVQFRVLRDLSTNVNKGVAFALYDDKENADRA 160
Query: 85 IIELNGLKL 93
I +++G L
Sbjct: 161 IQDMDGKTL 169
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 139/198 (70%), Gaps = 15/198 (7%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+T+ + S ++ +NLIVNY+PQ+MTQEE +LF++VG+++SCKL+RD++T QSL
Sbjct: 167 STSSATTEPASSGSSDPKTNLIVNYLPQSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSL 226
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
GYGFVNY DAE+A+ LN L+ K+IKVS+ARPSS +I+ ANLYVSGLP++M Q+D
Sbjct: 227 GYGFVNYVDPRDAEQAVCLLNRLQCPPKTIKVSFARPSSSSIRDANLYVSGLPRNMMQKD 286
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
LE LF P+G IITSRIL D+ VSG S+G+GF+ F++ EAE A++
Sbjct: 287 LEQLFSPFGRIITSRILIDR---------VSGA------SRGVGFILFDKKSEAEEAIKA 331
Query: 189 LNGTIPEGASEPITVKFA 206
LNG P G P+ VKFA
Sbjct: 332 LNGQKPCGNRVPLIVKFA 349
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SGWCIFVYNL+P++++NVLWQLFGPFGAV VK++RD T KCK FGFV MT+Y+EA A
Sbjct: 437 SGWCIFVYNLSPDSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSYNEAALA 496
Query: 330 IQSLNGYALGDRLLQVSFKTHK 351
+ SLNGY LG R+LQVSFKT+K
Sbjct: 497 VASLNGYCLGGRVLQVSFKTNK 518
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 59 IRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVS 118
+R T A +LG A IE G+ + S + S + + NL V+
Sbjct: 131 VRVPTLASALGEEAAAASPHLPPASAPIETPGVAGASTSSATTEPASSGSSDPKTNLIVN 190
Query: 119 GLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ 178
LP+ MTQE+ NLF G I + +++ D+ +++ G GFV +
Sbjct: 191 YLPQSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSL---------------GYGFVNYVD 235
Query: 179 HIEAEHAMQELN 190
+AE A+ LN
Sbjct: 236 PRDAEQAVCLLN 247
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 256 LLNNSMLPPKSLHGS----------GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
LLN PPK++ S ++V L L QLF PFG + +++
Sbjct: 245 LLNRLQCPPKTIKVSFARPSSSSIRDANLYVSGLPRNMMQKDLEQLFSPFGRIITSRILI 304
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGY-ALGDRL-LQVSFKTHK 351
D + +G GF+ EA AI++LNG G+R+ L V F H+
Sbjct: 305 DRVSGASRGVGFILFDKKSEAEEAIKALNGQKPCGNRVPLIVKFAQHQ 352
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 17 TYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYY 76
TY + + N P + + L LF G V K+IRD T + +GFV
Sbjct: 430 TYPGHTSSGWCIFVYNLSPDS-DENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMT 488
Query: 77 RTEDAERAIIELNGLKLQNKSIKVSY 102
+A A+ LNG L + ++VS+
Sbjct: 489 SYNEAALAVASLNGYCLGGRVLQVSF 514
>gi|315488446|gb|ADU32858.1| ELAV [Branchiostoma lanceolatum]
Length = 165
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 128/170 (75%), Gaps = 12/170 (7%)
Query: 168 SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA-GRAKALAANLNAQAAA 226
S+G+GFVRF+Q +EAE A+ ELNG IP+GA++PITVKFAN+P+ AKAL QAA
Sbjct: 7 SRGVGFVRFDQRVEAERAITELNGHIPKGATDPITVKFANNPSQNHAKALQ-----QAA- 60
Query: 227 MRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDN 286
+ A A R+ G LH +ARF+++P+ AD + +P G+G+CIFVYNLAP+TED+
Sbjct: 61 --YLAPARRYLGPMLHQTARFRYSPMGADPMGVGNIPNG---GTGFCIFVYNLAPDTEDS 115
Query: 287 VLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGY 336
VLWQLFGPFGAV NVKV+RD QT KCKGFGFV M +YDEAV AI LNGY
Sbjct: 116 VLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQLNGY 165
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P T L LF G V + K+IRD T + G+GFV ++A AI +L
Sbjct: 104 FVYNLAPDT-EDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQL 162
Query: 89 NG 90
NG
Sbjct: 163 NG 164
>gi|119732355|gb|ABL98209.1| ELAV-like protein [Bombyx mori]
Length = 268
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 169/320 (52%), Gaps = 59/320 (18%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
MTQ+ + LFS++G++ESCKLI ++ GYGFV Y R +DA +A NGL +QNK+
Sbjct: 1 MTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNGLLMQNKT 54
Query: 98 IKVSYA------RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMAS 151
+KVS+A +P ++ NLY+ LP +T + L LF +G II SRI
Sbjct: 55 LKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQGLHGLFAQFGRIINSRI------- 107
Query: 152 ENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
+ GI FV + EAE A+Q +NG+ P G P+TVK+AN
Sbjct: 108 ----------------AAGIAFVLYEHQYEAERAIQNINGSTPPGFLHPLTVKYANKSNP 151
Query: 212 RAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSG 271
N + +R + + H H++ P +
Sbjct: 152 HKHKNNNNTFTKNTIVRPY-QWINHISAVGEHNS------------------PNT----- 187
Query: 272 WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
W I++YN+A E E+ LWQLFGP+GA+ +VK++RD QT K KG+GFV M NYD+A AIQ
Sbjct: 188 WSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQAAMAIQ 247
Query: 332 SLNGYALGDRLLQVSFKTHK 351
+LNGY L + L VSFKT K
Sbjct: 248 ALNGYLLHGQPLSVSFKTQK 267
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 20 SDVNEQNS----NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
S V E NS ++ + + + + L LF G + S K+IRD T +S GYGFV
Sbjct: 177 SAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTM 236
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSY 102
+ A AI LNG L + + VS+
Sbjct: 237 RNYDQAAMAIQALNGYLLHGQPLSVSF 263
>gi|399152199|emb|CCI89170.1| elav protein, partial [Sepia officinalis]
Length = 171
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 129/186 (69%), Gaps = 15/186 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQT+T EE + +F S+G ++S K++RDK T S G+GFV+Y + EDA+RA+
Sbjct: 1 TNLIINYIPQTLTDEEFRSMFLSIGPIKSAKIVRDKATGYSYGFGFVDYEKVEDAQRAMQ 60
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL++QNK+IKV+ ARP E IK ANLYV LP+H Q DLE LF+ +GTII SR+L
Sbjct: 61 TLNGLQMQNKTIKVALARPGGEEIKGANLYVRNLPRHYQQMDLERLFQRFGTIIQSRVLT 120
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ + SKG+GFV F+Q +AE A+ +++GT+P G +EP+ +KFA
Sbjct: 121 DQTTGQ---------------SKGVGFVLFDQKKQAEEAISQISGTVPAGGTEPLLIKFA 165
Query: 207 NSPAGR 212
+ A +
Sbjct: 166 DDNAKK 171
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL V +P+ Q +L+ LF G + +++ D+TT QS G GFV + + + AE A
Sbjct: 85 KGANLYVRNLPRHYQQMDLERLFQRFGTIIQSRVLTDQTTGQSKGVGFVLFDQKKQAEEA 144
Query: 85 IIELNG 90
I +++G
Sbjct: 145 ISQISG 150
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+T D +F G +++ K+VRD T GFGFV ++A A+Q+L
Sbjct: 3 LIINYIPQTLTDEEFRSMFLSIGPIKSAKIVRDKATGYSYGFGFVDYEKVEDAQRAMQTL 62
Query: 334 NGYALGDRLLQVSF 347
NG + ++ ++V+
Sbjct: 63 NGLQMQNKTIKVAL 76
>gi|408358348|gb|AFU54936.1| ELAV-like protein 4, partial [Trachemys scripta elegans]
Length = 202
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 144/227 (63%), Gaps = 42/227 (18%)
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
SLGYGFVNY +DAE+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ
Sbjct: 1 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 60
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
++LE LF YG IITSRIL D++ +S+G+GF+RF++ IEAE A+
Sbjct: 61 KELEQLFSQYGRIITSRILVDQVTG---------------VSRGVGFIRFDKRIEAEEAI 105
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA- 245
+ LNG P GA+EPITVKFAN+P+ + +QA + + + R + PLHH A
Sbjct: 106 KGLNGQKPSGATEPITVKFANNPSQKT--------SQALLSQLYQSPNRRYPGPLHHQAQ 157
Query: 246 RF-------------KFAPLTADLLNNSM---LPPKSLHGSGWCIFV 276
RF +F+P+T D + + + +P + G+GWCIFV
Sbjct: 158 RFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIFV 202
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T S G GF+ + +
Sbjct: 40 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 99
Query: 80 DAERAIIELNGLKLQNKS--IKVSYARPSSEAIKRA---NLYVS------GLPKHMTQE- 127
+AE AI LNG K + I V +A S+ +A LY S G H Q
Sbjct: 100 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRF 159
Query: 128 DLENLFR-PYGTIITSRILCDKMAS 151
L+NL YG S I D M S
Sbjct: 160 RLDNLLNMAYGVKRFSPITIDGMTS 184
>gi|345312831|ref|XP_001516462.2| PREDICTED: ELAV-like protein 1-like, partial [Ornithorhynchus
anatinus]
Length = 182
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 129/190 (67%), Gaps = 16/190 (8%)
Query: 167 ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAA 226
+S+G+ F+RF++ EAE A+ NG P G+SEPITVKFA +P N N A
Sbjct: 1 LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP---------NQNKNVAL 51
Query: 227 MRH-FAAAMRHFGNPLHHSA-RFKFAPLTADLLNNSMLPPKSLHG---SGWCIFVYNLAP 281
+ + + R FG P+HH A RF+F+P+ D + S L ++ G SGWCIF+YNL
Sbjct: 52 LSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHM--SGLSGVNVPGNASSGWCIFIYNLGQ 109
Query: 282 ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDR 341
+ ++ +LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNY+EA AI SLNGY LGD+
Sbjct: 110 DADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDK 169
Query: 342 LLQVSFKTHK 351
+LQVSFKT+K
Sbjct: 170 ILQVSFKTNK 179
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 36 QTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQN 95
Q + L +F G V + K+IRD T + G+GFV E+A AI LNG +L +
Sbjct: 109 QDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGD 168
Query: 96 KSIKVSY 102
K ++VS+
Sbjct: 169 KILQVSF 175
>gi|360043584|emb|CCD81130.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 682
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 121/185 (65%), Gaps = 16/185 (8%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
M+QEE++ LFS +G++ SCKLIRDK T QSLGYGFVNY DAERAI LN ++LQNK+
Sbjct: 1 MSQEEMRILFSKIGKLASCKLIRDKLTGQSLGYGFVNYVDASDAERAIRALNKMRLQNKT 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
IKVS ARPS E+IK ANLY+ GLPK MT+ DLE LF P G IITSRIL D +
Sbjct: 61 IKVSLARPSCESIKGANLYICGLPKLMTESDLEKLFHPCGKIITSRILFDSNTGQ----- 115
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-TIPEGASEPITVKFANSPAGRAKAL 216
SKG+GF+RF+Q EAE A+Q+ NG + A P+ VKFAN P +
Sbjct: 116 ----------SKGVGFIRFDQRHEAELAIQQFNGYRVGSIADSPLIVKFANIPTSNKNGI 165
Query: 217 AANLN 221
+N
Sbjct: 166 TNTVN 170
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + +P+ MT+ +L+ LF G++ + +++ D T QS G GF+ + + +AE AI
Sbjct: 76 ANLYICGLPKLMTESDLEKLFHPCGKIITSRILFDSNTGQSKGVGFIRFDQRHEAELAIQ 135
Query: 87 ELNGLKL 93
+ NG ++
Sbjct: 136 QFNGYRV 142
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 15/79 (18%)
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVV-----------RDPQTYKCKGFGFVCMTNYDEAV 327
L+PET+++++ +LF F +V +++++ D Q K V M++Y++A
Sbjct: 583 LSPETDESIILRLFSAFPSVLSIQLLPNNELNGENNNNDKQEMK----ALVVMSDYEQAK 638
Query: 328 FAIQSLNGYALGDRLLQVS 346
AI LNGY L +R+L+VS
Sbjct: 639 LAIHYLNGYTLQNRVLKVS 657
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
G +++ L ++ L +LF P G + +++ D T + KG GF+ EA AI
Sbjct: 75 GANLYICGLPKLMTESDLEKLFHPCGKIITSRILFDSNTGQSKGVGFIRFDQRHEAELAI 134
Query: 331 QSLNGYALG---DRLLQVSF 347
Q NGY +G D L V F
Sbjct: 135 QQFNGYRVGSIADSPLIVKF 154
>gi|608547|gb|AAA96939.1| ribonucleoprotein, partial [Danio rerio]
Length = 183
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 124/189 (65%), Gaps = 29/189 (15%)
Query: 181 EAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNP 240
EAE A++ LNG P GA+EPITVKFAN+P+ + QA + + A R + P
Sbjct: 2 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQK--------TGQALLTQLYQTAARRYTGP 53
Query: 241 LHH-SARFK-------------FAPLTADLLNN----SMLPPKSLHGSGWCIFVYNLAPE 282
LHH + RF+ F+P+T D + + ++ P G+GWCIFVYNL+PE
Sbjct: 54 LHHQTQRFRLDNLLNASYGVKRFSPITIDSMTSLAGVNLTGPT---GAGWCIFVYNLSPE 110
Query: 283 TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRL 342
+++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LGDR+
Sbjct: 111 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 170
Query: 343 LQVSFKTHK 351
LQVSFKT K
Sbjct: 171 LQVSFKTSK 179
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 103 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 161
Query: 89 NGLKLQNKSIKVSY 102
NG +L ++ ++VS+
Sbjct: 162 NGYRLGDRVLQVSF 175
>gi|239938028|gb|ACS36113.1| RNA-binding protein Elav1 [Capitella teleta]
Length = 143
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 108/132 (81%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
++S Q D+ + +NLIVNY+PQ+MTQ++++ LFSS+GEVESCKLIRDK T QSLGY
Sbjct: 12 SESAVQVLQRDMKDSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDKATGQSLGY 71
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFVNY R EDA +AI LNGL+LQNK+IKVS ARPSSE+IK ANLY+SGLPK+MTQ DLE
Sbjct: 72 GFVNYKRQEDASKAITSLNGLRLQNKTIKVSVARPSSESIKGANLYISGLPKNMTQVDLE 131
Query: 131 NLFRPYGTIITS 142
N+F G IITS
Sbjct: 132 NMFNHCGNIITS 143
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D++ LF G V++ K++RD T + G+GFV ++A AI S
Sbjct: 30 LIVNYLPQSMTQDDI-RSLFSSIGEVESCKLIRDKATGQSLGYGFVNYKRQEDASKAITS 88
Query: 333 LNGYALGDRLLQVSF 347
LNG L ++ ++VS
Sbjct: 89 LNGLRLQNKTIKVSV 103
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP+ MTQ+D+ +LF G + + +++ DK +++ G
Sbjct: 27 KTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDKATGQSL---------------GY 71
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + + +A A+ LNG
Sbjct: 72 GFVNYKRQEDASKAITSLNG 91
>gi|38047677|gb|AAR09741.1| similar to Drosophila melanogaster fne, partial [Drosophila yakuba]
Length = 166
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 110/145 (75%), Gaps = 18/145 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA----------------- 65
+E +NLIVNY+PQTMTQEE++ LFSS+GE+ESCKL+RDK +
Sbjct: 22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQ 81
Query: 66 -QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
QSLGYGFVNY R EDAE+A+ LNGL+LQNK IKVSYARPSSE+IK ANLYVSGLPK++
Sbjct: 82 GQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKNL 141
Query: 125 TQEDLENLFRPYGTIITSRILCDKM 149
+Q DLE +F +G IITSRILCD +
Sbjct: 142 SQPDLEGMFASFGKIITSRILCDNI 166
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV--RSFVSGTPEIPQ-IS 168
R NL V+ LP+ MTQE++ +LF G + + +++ DK++ V S + P + Q S
Sbjct: 25 RTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQGQS 84
Query: 169 KGIGFVRFNQHIEAEHAMQELNG 191
G GFV + + +AE A+ LNG
Sbjct: 85 LGYGFVNYVRAEDAEKAVNTLNG 107
>gi|351701133|gb|EHB04052.1| ELAV-like protein 1 [Heterocephalus glaber]
Length = 224
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 142/252 (56%), Gaps = 59/252 (23%)
Query: 7 MYNTTQSHRS-TYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
M N + H + ++ D+ N LIVN +PQ MTQ+EL+ LFSS+GEVES KLIRDK
Sbjct: 1 MSNGYEDHMAEDFRDDIRRMN--LIVNCLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
SLGYGFVNY +DAERAI LNGL+L +K+IKVSYARPSSE IK ANLY+SGLP+ MT
Sbjct: 59 HSLGYGFVNYVTAKDAERAICTLNGLRLPSKTIKVSYARPSSEVIKNANLYISGLPRTMT 118
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q+D+E++F +G II SR+L D+
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTT----------------------------------- 143
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHS 244
G+SEPITVKFA +P N N A + + + R FG P+HH
Sbjct: 144 ----------GSSEPITVKFAANP---------NKNKNVALLSQLYHSPARRFGGPVHHQ 184
Query: 245 A-RFKFAPLTAD 255
A RF+F+ + D
Sbjct: 185 ALRFRFSLMGVD 196
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D L LF G V++ K++RD G+GFV +A AI +
Sbjct: 22 LIVNCLPQNMTQDE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAICT 80
Query: 333 LNGYALGDRLLQVSF 347
LNG L + ++VS+
Sbjct: 81 LNGLRLPSKTIKVSY 95
>gi|148698745|gb|EDL30692.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Mus musculus]
gi|149035669|gb|EDL90350.1| rCG50282, isoform CRA_b [Rattus norvegicus]
Length = 170
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 105/129 (81%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 101 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160
Query: 142 SRILCDKMA 150
SRIL D++
Sbjct: 161 SRILVDQVT 169
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 65 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 121
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQE+ +LF G I + +++ DK+ +++ G
Sbjct: 45 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL---------------GY 89
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 90 GFVNYIDPKDAEKAINTLNG 109
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
+++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T
Sbjct: 130 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|148698744|gb|EDL30691.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Mus musculus]
gi|149035668|gb|EDL90349.1| rCG50282, isoform CRA_a [Rattus norvegicus]
Length = 173
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 105/129 (81%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 44 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 103
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 104 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 163
Query: 142 SRILCDKMA 150
SRIL D++
Sbjct: 164 SRILVDQVT 172
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 68 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 124
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQE+ +LF G I + +++ DK+ +++ G
Sbjct: 48 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL---------------GY 92
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 93 GFVNYIDPKDAEKAINTLNG 112
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
+++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T
Sbjct: 133 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|148698746|gb|EDL30693.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Mus musculus]
Length = 167
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 105/129 (81%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 38 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 97
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 98 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 157
Query: 142 SRILCDKMA 150
SRIL D++
Sbjct: 158 SRILVDQVT 166
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 62 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 118
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQE+ +LF G I + +++ DK+ +++ G
Sbjct: 42 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL---------------GY 86
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 87 GFVNYIDPKDAEKAINTLNG 106
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
+++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T
Sbjct: 127 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 167
>gi|149035670|gb|EDL90351.1| rCG50282, isoform CRA_c [Rattus norvegicus]
Length = 175
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 105/129 (81%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DA
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
E+AI LNGL+LQ K+IKVSYARPSS +I+ ANLYVSGLPK MTQ++LE LF YG IIT
Sbjct: 106 EKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165
Query: 142 SRILCDKMA 150
SRIL D++
Sbjct: 166 SRILVDQVT 174
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++VS+
Sbjct: 70 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 126
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQE+ +LF G I + +++ DK+ +++ G
Sbjct: 50 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL---------------GY 94
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +AE A+ LNG
Sbjct: 95 GFVNYIDPKDAEKAINTLNG 114
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
+++NL V+ +P+TMTQ+EL+ LFS G + + +++ D+ T
Sbjct: 135 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|156388911|ref|XP_001634736.1| predicted protein [Nematostella vectensis]
gi|156221822|gb|EDO42673.1| predicted protein [Nematostella vectensis]
Length = 313
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 175/340 (51%), Gaps = 41/340 (12%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E + LIVNY+PQ MT + + +F +V + +CK++R K + S G+GFV+Y TEDA++
Sbjct: 2 ESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQK 61
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI +LNG + NK +KV+++RP + K ANLYV +PK + + + F YG I+ R
Sbjct: 62 AIDKLNGFTIGNKVLKVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCR 121
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L DK +G P KG GFV +++ EA+ A+ L+GT G++ + +
Sbjct: 122 LLRDK---------STGLP------KGCGFVLYDKKAEAQAAISSLSGTFFPGSTMGLQI 166
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF--KFAPLTADLL---- 257
++A+ + + + + +F M G + RF +F P+ L
Sbjct: 167 RYADDNSAKVRP--------PNNVPNFGQQMGGPGPIRPPANRFQARFNPMGGGPLPQQK 218
Query: 258 ------NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYK 311
N S PP G ++VYN+ + + LF G V V ++ D Q +
Sbjct: 219 MTHMNGNKSQAPP------GCTLYVYNIGYDANQEGITALFAQCGIVNKVDIMWDWQRQQ 272
Query: 312 CKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
CKGF FV M +EA AIQ+LNG+ ++ LQVS + +
Sbjct: 273 CKGFCFVTMATQEEAQNAIQTLNGFMYTNKPLQVSLYSKR 312
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N + +NL V +P+ + + E + F + G + +C+L+RDK+T G GFV Y + +A+
Sbjct: 87 NTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQ 146
Query: 83 RAIIELNGLKLQNKS--IKVSYARPSSEAIKRAN 114
AI L+G + +++ YA +S ++ N
Sbjct: 147 AAISSLSGTFFPGSTMGLQIRYADDNSAKVRPPN 180
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 131/192 (68%), Gaps = 16/192 (8%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQ+MT+++L LF ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 82 EPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAAT 141
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T+ ++++F YG I+
Sbjct: 142 AISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 201
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK+ +G P +G+ FVRF++ EA+ A+ L+GTIPEG SEP++V
Sbjct: 202 ILKDKL---------TGLP------RGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
Query: 204 KFANSPAGRAKA 215
K A G+ KA
Sbjct: 247 KIAEE-HGKQKA 257
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ LF G V++ +V++D +T GFGFV ++A AI +L
Sbjct: 87 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 146
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 147 NGLQVQNKRLKVSF 160
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 131/199 (65%), Gaps = 15/199 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQ+MT+++L LF ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 82 EPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAAT 141
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T+ ++++F YG I+
Sbjct: 142 AISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 201
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK+ +G P +G+ FVRF++ EA+ A+ L+GTIPEG SEP++V
Sbjct: 202 ILKDKL---------TGLP------RGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
Query: 204 KFANSPAGRAKALAANLNA 222
K A + A A A
Sbjct: 247 KIAEEHGKQKAAYYAGWQA 265
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ LF G V++ +V++D +T GFGFV ++A AI +L
Sbjct: 87 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 146
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 147 NGLQVQNKRLKVSF 160
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 131/199 (65%), Gaps = 15/199 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQ+MT+++L LF ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 82 EPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAAT 141
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T+ ++++F YG I+
Sbjct: 142 AISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 201
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK+ +G P +G+ FVRF++ EA+ A+ L+GTIPEG SEP++V
Sbjct: 202 ILKDKL---------TGLP------RGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
Query: 204 KFANSPAGRAKALAANLNA 222
K A + A A A
Sbjct: 247 KIAEEHGKQKAAYYAGWQA 265
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ LF G V++ +V++D +T GFGFV ++A AI +L
Sbjct: 87 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 146
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 147 NGLQVQNKRLKVSF 160
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 133/200 (66%), Gaps = 15/200 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ +NLI+NY+PQ+MT++EL +F ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 34 NDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDAL 93
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T++ +E +F +G I+
Sbjct: 94 TAINTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQK 153
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
IL DK+ +G P +G+ FVR+++ EA+ A+ +L+GTIPEG SEP++
Sbjct: 154 NILKDKL---------TGLP------RGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLS 198
Query: 203 VKFANSPAGRAKALAANLNA 222
VK A + A A A
Sbjct: 199 VKIAEEHGKQKAAYYAGWQA 218
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ +F G V++ +V++D +T GFGFV T ++A+ AI +L
Sbjct: 40 LIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAINTL 99
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 100 NGLQVQNKRLKVSF 113
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 133/200 (66%), Gaps = 15/200 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ +NLI+NY+PQ+MT++EL +F ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 78 NDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDAL 137
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T++ +E +F +G I+
Sbjct: 138 TAINTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQK 197
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
IL DK+ +G P +G+ FVR+++ EA+ A+ +L+GTIPEG SEP++
Sbjct: 198 NILKDKL---------TGLP------RGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLS 242
Query: 203 VKFANSPAGRAKALAANLNA 222
VK A + A A A
Sbjct: 243 VKIAEEHGKQKAAYYAGWQA 262
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ +F G V++ +V++D +T GFGFV T ++A+ AI +L
Sbjct: 84 LIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAINTL 143
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 144 NGLQVQNKRLKVSF 157
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 131/199 (65%), Gaps = 15/199 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQ+MT+++L LF ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 110 EPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAAT 169
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T+ ++++F YG I+
Sbjct: 170 AINTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 229
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK ++G P +G+ FVRF++ EA+ A+ L+GTIPEG SEP++V
Sbjct: 230 ILKDK---------ITGLP------RGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 274
Query: 204 KFANSPAGRAKALAANLNA 222
K A + A A A
Sbjct: 275 KIAEEHGKQKAAYYAGWQA 293
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ LF G V++ +V++D +T GFGFV ++A AI +L
Sbjct: 115 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAINTL 174
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 175 NGLQVQNKRLKVSF 188
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 133/200 (66%), Gaps = 15/200 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ +NLI+NY+PQ+MT++EL +F ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 95 NDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDAL 154
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T++ +E +F +G I+
Sbjct: 155 TAINTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQK 214
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
IL DK+ +G P +G+ FVR+++ EA+ A+ +L+GTIPEG SEP++
Sbjct: 215 NILKDKL---------TGLP------RGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLS 259
Query: 203 VKFANSPAGRAKALAANLNA 222
VK A + A A A
Sbjct: 260 VKIAEEHGKQKAAYYAGWQA 279
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ + L+ +F G V++ +V++D +T GFGFV T ++A+ AI +L
Sbjct: 101 LIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAINTL 160
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 161 NGLQVQNKRLKVSF 174
>gi|345327136|ref|XP_001505507.2| PREDICTED: ELAV-like protein 1-like [Ornithorhynchus anatinus]
Length = 229
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 105/128 (82%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL+LQ+K+IKVSYARPSSE IK ANLY+SGLP+ MTQ+D+E++F +G II SR+L
Sbjct: 80 TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139
Query: 147 DKMASENV 154
D+ + N+
Sbjct: 140 DQTTALNL 147
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 103 ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
A + I R NL V+ LP++MTQ++L +LF G + +++++ DK+A ++
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL-------- 61
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
G GFV + +AE A+ LNG + S+ I V +A
Sbjct: 62 -------GYGFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 96
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 271 GWCIFVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
G + N P+ T+D L LF G V++ K++RD G+GFV +A
Sbjct: 18 GRTNLIVNYLPQNMTQDE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 329 AIQSLNGYALGDRLLQVSF 347
AI +LNG L + ++VS+
Sbjct: 77 AINTLNGLRLQSKTIKVSY 95
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 34/45 (75%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
+++NL ++ +P+TMTQ++++ +FS G + + +++ D+TTA +L
Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTALNLA 148
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 128/199 (64%), Gaps = 15/199 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQ M ++EL LF ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 92 EPRTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAAT 151
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T+ ++ LF YG I+
Sbjct: 152 AISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDELFSKYGNIVQKN 211
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK+ +G P +G+ FVRF++ EA+ A+ L+GTIPEG SEP++V
Sbjct: 212 ILRDKL---------TGLP------RGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 256
Query: 204 KFANSPAGRAKALAANLNA 222
K A + A A A
Sbjct: 257 KIAEEHGKQKAAYYAGWQA 275
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+ + L+ LF G V++ +V++D +T GFGFV ++A AI +L
Sbjct: 97 LIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 156
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VSF
Sbjct: 157 NGLQVQNKRLKVSF 170
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 128/199 (64%), Gaps = 15/199 (7%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLI+NY+PQ M ++EL LF ++G VESC++++D T S G+GFVNY + EDA
Sbjct: 26 EPRTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAAT 85
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
AI LNGL++QNK +KVS+ARPS E IK NLYV+ LP+++T+ ++ +F YG I+
Sbjct: 86 AISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKN 145
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK+ +G P +G+ FVRF++ EA+ A+ L+GTIPEG SEP++V
Sbjct: 146 ILKDKL---------TGLP------RGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 190
Query: 204 KFANSPAGRAKALAANLNA 222
K A + A A A
Sbjct: 191 KIAEEHGKQKAAYYAGWQA 209
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+ LF G V++ +V++D +T GFGFV ++A AI +LNG + ++ L+VSF
Sbjct: 45 LYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSF 104
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 138/205 (67%), Gaps = 17/205 (8%)
Query: 12 QSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
Q+ ++D +++ +NLI+NY+PQ MT +EL +F ++G V+SC++++D T S G+G
Sbjct: 4 QNQGQGVKNDCDDK-TNLIINYLPQHMTDKELYSMFVTIGPVQSCRVMKDFKTGYSYGFG 62
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLEN 131
FV Y + EDA RAI LNGL++QNK +KVSYARP+ + IK NLYV+ LPK++T+++L+N
Sbjct: 63 FVKYCKEEDASRAIGTLNGLQVQNKRLKVSYARPAGDDIKDTNLYVTNLPKNITEQELDN 122
Query: 132 LFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+F PYG I+ IL DK V+G P +G+ FVR+++ EA+ A+ LNG
Sbjct: 123 IFGPYGFIVQKNILKDK---------VTGMP------RGVAFVRYDKKEEAQAAISNLNG 167
Query: 192 TIPEGASEPITVKFANSPAGRAKAL 216
+P+GA+E I VK A G+ KA+
Sbjct: 168 VVPDGATEAIQVKIAEE-HGKQKAV 191
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPE-TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+ D L+ +F G VQ+ +V++D +T GFGFV ++A AI +L
Sbjct: 20 LIINYLPQHMTDKELYSMFVTIGPVQSCRVMKDFKTGYSYGFGFVKYCKEEDASRAIGTL 79
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 80 NGLQVQNKRLKVSY 93
>gi|330794853|ref|XP_003285491.1| hypothetical protein DICPUDRAFT_149370 [Dictyostelium purpureum]
gi|325084582|gb|EGC38007.1| hypothetical protein DICPUDRAFT_149370 [Dictyostelium purpureum]
Length = 352
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 178/351 (50%), Gaps = 49/351 (13%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L V+++P T T E L+ LFS GE++SCK++ D T S G+GFV + A+ AI +
Sbjct: 19 LFVSFLPSTYTNESLKVLFSPFGEIDSCKVMVDLNTGLSRGFGFVKFKDVASAQYAINSM 78
Query: 89 NGLKLQNKSIKVSYA--------------------RPSSEAIKRANLYVSGLPKHMTQED 128
NG+K+ NK++ V +A ++ AI N+++ GLP T +
Sbjct: 79 NGMKVDNKTLLVRFANSEPIQQQQQQQQQQQQSVDEANTNAIASNNVFIKGLPTEYTMDQ 138
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF P+G I+ S+IL D S S+G VR+ A +A++E
Sbjct: 139 LKALFSPHGEILESKILTDISTSA---------------SRGQALVRYGDVQSASNAVKE 183
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH-------FAAAMRHFGNPL 241
LNG I + +P+ VKFA + + ++ LN++ ++ F+ P+
Sbjct: 184 LNGYIIQDPDKPLIVKFAENDEEKKQS---KLNSKRQKLQQKQRLNMRFSPYPSPIAAPI 240
Query: 242 HHSARFKFAPLTADLLNNSMLPP----KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGA 297
+ T L+ M PP K++ ++VYNL + +D +L++LF P GA
Sbjct: 241 TQMYPYYQTMPTLPTLSPIMQPPILTTKTITQDPTNLYVYNLPSDADDALLYRLFSPSGA 300
Query: 298 VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
+ +VK+VRDP T CKG+GFV M + ++ AI S+NG +G + + VSFK
Sbjct: 301 IASVKIVRDPNTQVCKGYGFVRMLSLPDSYAAINSINGIQVGGKTISVSFK 351
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
+ + +NL V +P L LFS G + S K++RD T GYGFV D+
Sbjct: 270 ITQDPTNLYVYNLPSDADDALLYRLFSPSGAIASVKIVRDPNTQVCKGYGFVRMLSLPDS 329
Query: 82 ERAIIELNGLKLQNKSIKVSYAR 104
AI +NG+++ K+I VS+ +
Sbjct: 330 YAAINSINGIQVGGKTISVSFKK 352
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+FV L + L LF PFG + + KV+ D T +GFGFV + A +AI S+
Sbjct: 19 LFVSFLPSTYTNESLKVLFSPFGEIDSCKVMVDLNTGLSRGFGFVKFKDVASAQYAINSM 78
Query: 334 NGYALGDRLLQVSFKTHKPL 353
NG + ++ L V F +P+
Sbjct: 79 NGMKVDNKTLLVRFANSEPI 98
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQTMT+++L +F S+G +ESC++++D T S G+GFVN+ R EDA RAI
Sbjct: 61 TNLIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIE 120
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
NG +L+NK +KVSYARPS E IK NLYV+ LP+ +T++ LE +F YG I+ IL
Sbjct: 121 TFNGYQLRNKRLKVSYARPSGEDIKETNLYVTNLPRAITEDQLETIFGKYGRIVQKHILR 180
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK +GTP +G+ FVRF++ EA+ A+ LN IPEG SEP+ VK A
Sbjct: 181 DK---------SNGTP------RGVAFVRFDKREEAQEAIAALNNVIPEGGSEPLCVKVA 225
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+T + L+ +F G +++ +V++D +T GFGFV T ++A AI++
Sbjct: 63 LIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIETF 122
Query: 334 NGYALGDRLLQVSF 347
NGY L ++ L+VS+
Sbjct: 123 NGYQLRNKRLKVSY 136
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D+ E +NL V +P+ +T+++L+ +F G + ++RDK+ G FV + + E+
Sbjct: 143 DIKE--TNLYVTNLPRAITEDQLETIFGKYGRIVQKHILRDKSNGTPRGVAFVRFDKREE 200
Query: 81 AERAIIELNGL 91
A+ AI LN +
Sbjct: 201 AQEAIAALNNV 211
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP+ MT++DL +F G I + R++ D F +G S G
Sbjct: 60 KTNLIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKD---------FKTG------YSYGF 104
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV F + +A A++ NG
Sbjct: 105 GFVNFTREEDAARAIETFNG 124
>gi|313230196|emb|CBY07900.1| unnamed protein product [Oikopleura dioica]
Length = 423
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 124/183 (67%), Gaps = 17/183 (9%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NLIVNY+PQ TQ++L+ LFSS+G++E+CKL R + T SLGYGFVN+ R+ DA+R
Sbjct: 117 ESKTNLIVNYLPQNYTQDQLRELFSSIGDIETCKLCRHRETKMSLGYGFVNFRRSSDAKR 176
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
A+ NGL +Q KSIKVSYARPSS IK NLYV+G+P+ +T +++NLF G II++R
Sbjct: 177 AVDSFNGLSIQTKSIKVSYARPSSNIIKNTNLYVAGIPRSITLAEIKNLFGRLGKIISAR 236
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL DK +SKG+ F+R++ +EAE A++ ++ EG E +TV
Sbjct: 237 ILHDKDTG---------------LSKGVAFIRYDTRVEAERAVKHMHHFNYEG--EVLTV 279
Query: 204 KFA 206
KFA
Sbjct: 280 KFA 282
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+N+NL V +P+++T E+++LF +G++ S +++ DK T S G F+ Y +AERA
Sbjct: 204 KNTNLYVAGIPRSITLAEIKNLFGRLGKIISARILHDKDTGLSKGVAFIRYDTRVEAERA 263
Query: 85 IIELNGLKLQNKSIKVSYARPSS 107
+ ++ + + + V +A+ S
Sbjct: 264 VKHMHHFNYEGEVLTVKFAKRQS 286
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ T+D L +LF G ++ K+ R +T G+GFV +A A+ S
Sbjct: 122 LIVNYLPQNYTQDQ-LRELFSSIGDIETCKLCRHRETKMSLGYGFVNFRRSSDAKRAVDS 180
Query: 333 LNGYALGDRLLQVSF 347
NG ++ + ++VS+
Sbjct: 181 FNGLSIQTKSIKVSY 195
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 129/199 (64%), Gaps = 15/199 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ+MT ++L +F+ +G++E+C++++D T S G+GFVN+ R EDA +AI
Sbjct: 9 TNLIINYLPQSMTDKKLHQMFTQIGQIEACRVMKDVKTGYSFGFGFVNFVRPEDASKAIE 68
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+NGL+++NK +KVSYARP+ E IK NLYV LP+ +T+ +LE+LF PYG I+ IL
Sbjct: 69 VMNGLQVENKRLKVSYARPAGEDIKDTNLYVQNLPRSITERELEDLFAPYGQIVQKNILK 128
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK SG P +G+ FVR+N+ +A+ A+ +LNG + EG +E ++VK A
Sbjct: 129 DKY---------SGLP------RGVAFVRYNKKEDAQKAIIQLNGVLLEGCTEHLSVKIA 173
Query: 207 NSPAGRAKALAANLNAQAA 225
+ A A L A
Sbjct: 174 EEHGKQKAAYLAGLQTGLA 192
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+++T+ EL+ LF+ G++ +++DK + G FV Y + EDA++A
Sbjct: 93 KDTNLYVQNLPRSITERELEDLFAPYGQIVQKNILKDKYSGLPRGVAFVRYNKKEDAQKA 152
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
II+LNG+ L+ + +S + + E K+ Y++GL
Sbjct: 153 IIQLNGVLLEGCTEHLS-VKIAEEHGKQKAAYLAGL 187
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ D L Q+F G ++ +V++D +T GFGFV ++A AI+ +
Sbjct: 11 LIINYLPQSMTDKKLHQMFTQIGQIEACRVMKDVKTGYSFGFGFVNFVRPEDASKAIEVM 70
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 71 NGLQVENKRLKVSY 84
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 126/190 (66%), Gaps = 17/190 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD-KTTAQSLGYGFVNYYRTEDAERAI 85
+NLIVNY+PQ MT+ E+ +FS++G +ESC+L+RD K T S G+GFVNY E A+RAI
Sbjct: 82 TNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAI 141
Query: 86 IELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LNG L+NK +KVSYARP S+ IK NLY++ LP+ +T+E L+ +F YGTI+ IL
Sbjct: 142 KCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNIL 201
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
DK+ +G P +G+ FVRFN+ EA+ A+ LN IP+G ++P+ V+
Sbjct: 202 RDKL---------TGQP------RGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRV 246
Query: 206 ANSPAGRAKA 215
A GRAKA
Sbjct: 247 AED-HGRAKA 255
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
QSD + + +NL + +P+T+T+E+L +F G + ++RDK T Q G FV + +
Sbjct: 162 QSD-DIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKR 220
Query: 79 EDAERAIIELNGLKLQ--NKSIKVSYARPSSEAIKRANLYV 117
E+A+ AI LN + Q N+ + V A A +A LYV
Sbjct: 221 EEAQEAISALNNVIPQGGNQPLIVRVAEDHGRA--KAALYV 259
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD-PQTYKCKGFGFVCMTN 322
P S +G + V L + + ++ +F G +++ +++RD QT GFGFV N
Sbjct: 74 PGSSGTAGTNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLN 133
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSF 347
+ A AI+ LNGY L ++ L+VS+
Sbjct: 134 EEAAQRAIKCLNGYPLRNKRLKVSY 158
>gi|358253025|dbj|GAA51417.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 290
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 14 HRSTYQSDV----------NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT 63
RS+ Q DV + +NLIVNY+PQTMTQEE++ +FS +G++ SCKLIRD+T
Sbjct: 41 ERSSLQEDVVVVEEDGEQHGDNQTNLIVNYLPQTMTQEEMRTMFSKIGKLTSCKLIRDRT 100
Query: 64 TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKH 123
+ QSLGYGFVNY DA RAI LN +++QNK IKVS ARPS E+IK ANLY+ GLPK
Sbjct: 101 SGQSLGYGFVNYVNASDARRAIKLLNRMRVQNKVIKVSLARPSCESIKGANLYICGLPKT 160
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMA 150
MT+++LE LF+ G IITSRILCD +
Sbjct: 161 MTEKELERLFQQCGKIITSRILCDNIT 187
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 268 HGSGWCIFVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEA 326
HG + N P+T + +F G + + K++RD + + G+GFV N +A
Sbjct: 59 HGDNQTNLIVNYLPQTMTQEEMRTMFSKIGKLTSCKLIRDRTSGQSLGYGFVNYVNASDA 118
Query: 327 VFAIQSLNGYALGDRLLQVSF 347
AI+ LN + +++++VS
Sbjct: 119 RRAIKLLNRMRVQNKVIKVSL 139
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 126/190 (66%), Gaps = 17/190 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD-KTTAQSLGYGFVNYYRTEDAERAI 85
+NLIVNY+PQ MT+ E+ +FS++G +ESC+L+RD K T S G+GFVNY E A+RAI
Sbjct: 104 TNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAI 163
Query: 86 IELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LNG L+NK +KVSYARP S+ IK NLY++ LP+ +T+E L+ +F YGTI+ IL
Sbjct: 164 KCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNIL 223
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
DK+ +G P +G+ FVRFN+ EA+ A+ LN IP+G ++P+ V+
Sbjct: 224 RDKL---------TGQP------RGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRV 268
Query: 206 ANSPAGRAKA 215
A GRAKA
Sbjct: 269 AED-HGRAKA 277
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
QSD + + +NL + +P+T+T+E+L +F G + ++RDK T Q G FV + +
Sbjct: 184 QSD-DIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKR 242
Query: 79 EDAERAIIELNGLKLQ--NKSIKVSYARPSSEAIKRANLYV 117
E+A+ AI LN + Q N+ + V A A +A LYV
Sbjct: 243 EEAQEAISALNNVIPQGGNQPLIVRVAEDHGRA--KAALYV 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD-PQTYKCKGFGFVCMTN 322
P S +G + V L + + ++ +F G +++ +++RD QT GFGFV N
Sbjct: 96 PGSSGTAGTNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLN 155
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSF 347
+ A AI+ LNGY L ++ L+VS+
Sbjct: 156 EEAAQRAIKCLNGYPLRNKRLKVSY 180
>gi|195048229|ref|XP_001992493.1| GH24172 [Drosophila grimshawi]
gi|193893334|gb|EDV92200.1| GH24172 [Drosophila grimshawi]
Length = 365
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF S+G + +C+++RD T S GY FV++
Sbjct: 110 NDPRNSNTNLIVNYLPQDMTDRELYALFRSIGTINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
Q+ T P +S +FA G A +L N A+ N L++
Sbjct: 49 QDTEFTFPSSSSRRGYNEFAGVNGGSANSLGGLCNMPMAS-----------NNSLNNLCG 97
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
+D L N P++ S + V L + D L+ LF G + +++RD
Sbjct: 98 LSIGSGGSDDLMND---PRN---SNTNLIVNYLPQDMTDRELYALFRSIGTINTCRIMRD 151
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+T G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 152 YKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 122/189 (64%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D++RAI
Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 161
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG I+ IL
Sbjct: 162 SLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILR 221
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 222 DKL---------TGKP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 267 -EEHGKAKA 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T ++L +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 186 KDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 245
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
I LN + + S ++ +A Y+S L
Sbjct: 246 ISALNNVIPEGASQPLTVRLAEEHGKAKAQHYMSQL 281
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + +++RD +T G+ FV ++ A
Sbjct: 100 NGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRA 159
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VS+
Sbjct: 160 IKSLNGITVRNKRLKVSY 177
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G + ++RD T K +G FV +EA AI +L
Sbjct: 190 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 249
Query: 334 N 334
N
Sbjct: 250 N 250
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 122/189 (64%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D++RAI
Sbjct: 110 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 169
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG I+ IL
Sbjct: 170 SLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILR 229
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 230 DKL---------TGKP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 274
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 275 EE-HGKAKA 282
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T ++L +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 194 KDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 253
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
I LN + + S ++ +A Y+S L
Sbjct: 254 ISALNNVIPEGASQPLTVRLAEEHGKAKAQHYMSQL 289
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + +++RD +T G+ FV ++ A
Sbjct: 108 NGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRA 167
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VS+
Sbjct: 168 IKSLNGITVRNKRLKVSY 185
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G + ++RD T K +G FV +EA AI +L
Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257
Query: 334 N 334
N
Sbjct: 258 N 258
>gi|42768810|gb|AAS45605.1| sex-lethal [Trichomegalosphys pubescens]
Length = 292
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+ N +NLIVNY+PQ MT E LFS++G +ES +++RD T S GYGFVNY E
Sbjct: 71 TGCNNSGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTEE 130
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
A+RAI LNG+ ++NK +KVS+ARP+ E IK NLYV+ LP+ +T+E L+ +F YG I
Sbjct: 131 GAQRAIKSLNGVTVRNKRLKVSFARPAGEEIKETNLYVTNLPRTITEEQLDEIFGKYGLI 190
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DKM +G P +G+ F+R+N+ EA+ A+ LN IPEG+++
Sbjct: 191 VQKNILRDKM---------TGKP------RGVAFIRYNKREEAQEAIAALNNVIPEGSNQ 235
Query: 200 PITVKFANSPAGRAKA 215
P+TV+ A G+ KA
Sbjct: 236 PLTVRVAEE-HGKQKA 250
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG + V L + D + LF G +++ +++RD +T G+GFV + A A
Sbjct: 76 SGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQRA 135
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VSF
Sbjct: 136 IKSLNGVTVRNKRLKVSF 153
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 136/238 (57%), Gaps = 26/238 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D
Sbjct: 113 DQRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 172
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I+
Sbjct: 173 SQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIV 232
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+P
Sbjct: 233 QKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQP 277
Query: 201 ITVKFANSPAGRAKAL---------AANLNAQAAAMRHFA-AAMRHFGNPLHHSARFK 248
++V+ A G+AKA +AN H A M H G + RF+
Sbjct: 278 LSVRLAQE-HGKAKAAHFMSQIGVPSANAPPPPPPPPHMAFNNMVHRGRSIKSQQRFQ 334
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 121 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 180
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 181 NGITVRNKRLKVSY 194
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 207 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 266
Query: 334 N 334
N
Sbjct: 267 N 267
>gi|42768806|gb|AAS45603.1| sex-lethal [Bradysia coprophila]
Length = 289
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+ N +NLIVNY+PQ MT E LFS+ G +ES +++RD T S GYGFVNY E
Sbjct: 68 TGCNNSGTNLIVNYLPQDMTDREFYALFSTTGPIESSRIMRDFKTCYSFGYGFVNYLTEE 127
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
A+RAI LNG+ ++NK +KVSYARP+ E +K NLYV+ LP+ +T+E L+ +F YG I
Sbjct: 128 GAQRAIKSLNGVTVRNKRLKVSYARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLI 187
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DKM +G P +G+ F+R+N+ EA+ A+ LN IPEG+++
Sbjct: 188 VQKNILRDKM---------TGKP------RGVAFIRYNKREEAQEAIAALNNVIPEGSNQ 232
Query: 200 PITVKFANSPAGRAKA 215
P+TV+ A G+ KA
Sbjct: 233 PLTVRVAEE-HGKQKA 247
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG + V L + D + LF G +++ +++RD +T G+GFV + A A
Sbjct: 73 SGTNLIVNYLPQDMTDREFYALFSTTGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQRA 132
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VS+
Sbjct: 133 IKSLNGVTVRNKRLKVSY 150
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 136/238 (57%), Gaps = 26/238 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D
Sbjct: 121 DQRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 180
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I+
Sbjct: 181 SQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIV 240
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+P
Sbjct: 241 QKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQP 285
Query: 201 ITVKFANSPAGRAKAL---------AANLNAQAAAMRHFA-AAMRHFGNPLHHSARFK 248
++V+ A G+AKA +AN H A M H G + RF+
Sbjct: 286 LSVRLAQE-HGKAKAAHFMSQIGVPSANAPPPPPPPPHMAFNNMVHRGRSIKSQQRFQ 342
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 129 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 188
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 189 NGITVRNKRLKVSY 202
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274
Query: 334 N 334
N
Sbjct: 275 N 275
>gi|42768808|gb|AAS45604.1| sex-lethal [Rhynchosciara americana]
Length = 293
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+ N +NLIVNY+PQ MT E LFS++G +ES +++RD T S GYGFVNY E
Sbjct: 72 TGCNGSGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTDE 131
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
A+RAI LNG+ ++NK IKVS+ARP+ E +K NLYV+ LP+ +T+E L+ +F YG I
Sbjct: 132 GAQRAIKSLNGVTVRNKRIKVSFARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLI 191
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DKM +G P +G+ F+R+N+ EA+ A+ LN IPEG+++
Sbjct: 192 VQKNILRDKM---------TGKP------RGVAFIRYNKREEAQEAIAALNNVIPEGSNQ 236
Query: 200 PITVKFANSPAGRAKA 215
P+TV+ A G+ KA
Sbjct: 237 PLTVRVAEE-HGKQKA 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 268 HGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAV 327
+GSG + V L + D + LF G +++ +++RD +T G+GFV + A
Sbjct: 75 NGSGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTDEGAQ 134
Query: 328 FAIQSLNGYALGDRLLQVSF 347
AI+SLNG + ++ ++VSF
Sbjct: 135 RAIKSLNGVTVRNKRIKVSF 154
>gi|195396313|ref|XP_002056776.1| Sex lethal [Drosophila virilis]
gi|194146543|gb|EDW62262.1| Sex lethal [Drosophila virilis]
Length = 368
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 126/198 (63%), Gaps = 16/198 (8%)
Query: 18 YQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYR 77
+ +D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 109 HMNDQRNSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTS 168
Query: 78 TEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG
Sbjct: 169 EMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYG 228
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+I+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG
Sbjct: 229 SIVQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGG 273
Query: 198 SEPITVKFANSPAGRAKA 215
S+P++V+ A G+AKA
Sbjct: 274 SQPLSVRLAEE-HGKAKA 290
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 120 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 179
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 180 NGITVRNKRLKVSY 193
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 206 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 265
Query: 334 N 334
N
Sbjct: 266 N 266
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ +T+++L +F ++G +ESC++++D T S G+GFVN+ R EDA RAI
Sbjct: 63 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 122
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
NG +L+NK +KVSYARPS + IK NLYV+ LP+ +T + LE +F YG I+ IL
Sbjct: 123 TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 182
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK SGTP +G+ FVR+++ EA+ A+ LN IPEG +EP++VK A
Sbjct: 183 DKN---------SGTP------RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 227
Query: 207 NSPAGRAKALAANLNA 222
+ A A +A
Sbjct: 228 EEHGKQKAAYYAGWSA 243
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
D+ E +NL V +P+ +T ++L+ +F G + ++RDK + G FV Y + E
Sbjct: 144 DDIKE--TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKRE 201
Query: 80 DAERAIIELN 89
+A+ AI LN
Sbjct: 202 EAQEAIAALN 211
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+ +F G +++ +V++D +T GFGFV T ++A AI + NGY L ++ L+VS+
Sbjct: 79 LYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSY 138
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP+++T++DL +F G I + R++ D F +G S G
Sbjct: 62 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD---------FKTG------YSYGF 106
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV F + +A A+ NG
Sbjct: 107 GFVNFTREEDAARAIDTFNG 126
>gi|195132500|ref|XP_002010681.1| GI21573 [Drosophila mojavensis]
gi|193907469|gb|EDW06336.1| GI21573 [Drosophila mojavensis]
Length = 367
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDQRTSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 178
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 179 NGITVRNKRLKVSY 192
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ +T+++L +F ++G +ESC++++D T S G+GFVN+ R EDA RAI
Sbjct: 63 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 122
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
NG +L+NK +KVSYARPS + IK NLYV+ LP+ +T + LE +F YG I+ IL
Sbjct: 123 TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 182
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK SGTP +G+ FVR+++ EA+ A+ LN IPEG +EP++VK A
Sbjct: 183 DKN---------SGTP------RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 227
Query: 207 NSPAGRAKALAANLNA 222
+ A A +A
Sbjct: 228 EEHGKQKAAYYAGWSA 243
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
D+ E +NL V +P+ +T ++L+ +F G + ++RDK + G FV Y + E
Sbjct: 144 DDIKE--TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKRE 201
Query: 80 DAERAIIELN 89
+A+ AI LN
Sbjct: 202 EAQEAIAALN 211
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+ +F G +++ +V++D +T GFGFV T ++A AI + NGY L ++ L+VS+
Sbjct: 79 LYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSY 138
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP+++T++DL +F G I + R++ D F +G S G
Sbjct: 62 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD---------FKTG------YSYGF 106
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV F + +A A+ NG
Sbjct: 107 GFVNFTREEDAARAIDTFNG 126
>gi|195168643|ref|XP_002025140.1| GL26885 [Drosophila persimilis]
gi|198471287|ref|XP_002133706.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
gi|194108585|gb|EDW30628.1| GL26885 [Drosophila persimilis]
gi|198145851|gb|EDY72333.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
Length = 377
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 124/195 (63%), Gaps = 16/195 (8%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D
Sbjct: 121 DQRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 180
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I+
Sbjct: 181 SQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIV 240
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+P
Sbjct: 241 QKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQP 285
Query: 201 ITVKFANSPAGRAKA 215
++V+ A G+AKA
Sbjct: 286 LSVRLAEE-HGKAKA 299
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 129 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 188
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 189 NGITVRNKRLKVSY 202
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274
Query: 334 N 334
N
Sbjct: 275 N 275
>gi|260166763|gb|ACX32993.1| RE12578p [Drosophila melanogaster]
Length = 360
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 124 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 183
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 184 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 243
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 244 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 288
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 289 PLSVRLAEE-HGKAKA 303
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 119 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 171
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 172 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 206
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 219 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 278
Query: 334 N 334
N
Sbjct: 279 N 279
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ +T+++L +F ++G +ESC++++D T S G+GFVN+ R EDA RAI
Sbjct: 17 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 76
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
NG +L+NK +KVSYARPS + IK NLYV+ LP+ +T + LE +F YG I+ IL
Sbjct: 77 TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 136
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK SGTP +G+ FVR+++ EA+ A+ LN IPEG +EP++VK A
Sbjct: 137 DKN---------SGTP------RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 181
Query: 207 NSPAGRAKALAANLNA 222
+ A A +A
Sbjct: 182 EEHGKQKAAYYAGWSA 197
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
D+ E +NL V +P+ +T ++L+ +F G + ++RDK + G FV Y + E
Sbjct: 98 DDIKE--TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKRE 155
Query: 80 DAERAIIELNGL 91
+A+ AI LN +
Sbjct: 156 EAQEAIAALNNV 167
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+ +F G +++ +V++D +T GFGFV T ++A AI + NGY L ++ L+VS+
Sbjct: 33 LYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSY 92
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP+++T++DL +F G I + R++ D F +G S G
Sbjct: 16 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD---------FKTG------YSYGF 60
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV F + +A A+ NG
Sbjct: 61 GFVNFTREEDAARAIDTFNG 80
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 108 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 167
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 168 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 227
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 228 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 272
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 273 PLSVRLAEE-HGKAKA 287
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 103 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 155
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 156 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 190
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 262
Query: 334 N 334
N
Sbjct: 263 N 263
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 121/189 (64%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D++RAI
Sbjct: 105 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFASETDSQRAIK 164
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG I+ IL
Sbjct: 165 SLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILR 224
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEG S+P+TV+ A
Sbjct: 225 DKL---------TGKP------RGVAFVRFNKREEAQEAISALNNVIPEGGSQPLTVRLA 269
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 270 EE-HGKAKA 277
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T ++L +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 189 KDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 248
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
I LN + + S ++ +A Y+S L
Sbjct: 249 ISALNNVIPEGGSQPLTVRLAEEHGKAKAQQYMSQL 284
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV + ++ AI+SL
Sbjct: 107 LIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFASETDSQRAIKSL 166
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 167 NGITVRNKRLKVSY 180
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G + ++RD T K +G FV +EA AI +L
Sbjct: 193 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 252
Query: 334 N 334
N
Sbjct: 253 N 253
>gi|281203789|gb|EFA77985.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 447
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 176/338 (52%), Gaps = 41/338 (12%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ NL VN++P T+T E+L+ +FS+ G +ESC+++ D T QS G+GFV + +A A
Sbjct: 136 EQGNLFVNFLPSTVTTEDLRSMFSAFGAIESCRVMIDLVTGQSRGFGFVKFKDNNNANNA 195
Query: 85 IIELNGLKLQNKSIKVSYARPSS------------EAIKRANLYVSGLPKHMTQEDLENL 132
I +NG K++ K++ V +A + +A NLY+ GLP TQE L
Sbjct: 196 IKAMNGAKIEKKTLLVRHANVENSVTTGGVAPHVDDAKATNNLYIKGLPLSFTQEQLNEF 255
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F YGTI+ S++L D + S+G VRF + A +++ L
Sbjct: 256 FSAYGTILESKLLLDITTN---------------TSRGQALVRFAEISSATKSIKALTNY 300
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH--SARFKFA 250
GA + + V++A++ + + + +R F+ PL+ +A ++ +
Sbjct: 301 KFPGADKVVIVRYADNEEEKVHKRMKTQHKTRSNLR-FSPYPSPTTTPLYPAPTAFYQMS 359
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
P+ L M P +++YNL + +D +L++LF P GA+ +VKVV+DP T
Sbjct: 360 PVIGGL---GMDPTN--------LYIYNLPADADDALLYRLFSPSGAIASVKVVKDPITQ 408
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
CKGFGFV M N +A+ AI S+NG + ++LQVSFK
Sbjct: 409 ACKGFGFVRMVNLQDAINAINSVNGVTVEGKVLQVSFK 446
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 90/252 (35%), Gaps = 63/252 (25%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIR 60
+++H + N+ + D + +NL + +P + TQE+L FS+ G + KL+
Sbjct: 210 LVRHANVENSVTTGGVAPHVDDAKATNNLYIKGLPLSFTQEQLNEFFSAYGTILESKLLL 269
Query: 61 DKTTAQSLGYGFVNYYRTEDAERAIIELNGLKL--QNKSIKVSYARPSSEAIKR------ 112
D TT S G V + A ++I L K +K + V YA E + +
Sbjct: 270 DITTNTSRGQALVRFAEISSATKSIKALTNYKFPGADKVVIVRYADNEEEKVHKRMKTQH 329
Query: 113 ----------------------------------------ANLYVSGLPKHMTQEDLENL 132
NLY+ LP L L
Sbjct: 330 KTRSNLRFSPYPSPTTTPLYPAPTAFYQMSPVIGGLGMDPTNLYIYNLPADADDALLYRL 389
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F P G I + +++ D I Q KG GFVR +A +A+ +NG
Sbjct: 390 FSPSGAIASVKVVKDP---------------ITQACKGFGFVRMVNLQDAINAINSVNGV 434
Query: 193 IPEGASEPITVK 204
EG ++ K
Sbjct: 435 TVEGKVLQVSFK 446
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + +P L LFS G + S K+++D T G+GFV +DA AI
Sbjct: 370 TNLYIYNLPADADDALLYRLFSPSGAIASVKVVKDPITQACKGFGFVRMVNLQDAINAIN 429
Query: 87 ELNGLKLQNKSIKVSYAR 104
+NG+ ++ K ++VS+ +
Sbjct: 430 SVNGVTVEGKVLQVSFKK 447
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 86 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 145
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 146 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 205
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 206 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 250
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 251 PLSVRLAEE-HGKAKA 265
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 81 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 133
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 134 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 168
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 181 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 240
Query: 334 N 334
N
Sbjct: 241 N 241
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ +T+++L +F ++G +ESC++++D T S G+GFVN+ R EDA RAI
Sbjct: 63 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 122
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
NG +L+NK +KVSYARPS + IK NLYV+ LP+ +T + LE +F YG I+ IL
Sbjct: 123 TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 182
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK SGTP +G+ FVR+++ EA+ A+ LN IPEG +EP++VK A
Sbjct: 183 DKN---------SGTP------RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 227
Query: 207 NSPAGRAKALAANLNA 222
+ A A +A
Sbjct: 228 EEHGKQKAAYYAGWSA 243
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
D+ E +NL V +P+ +T ++L+ +F G + ++RDK + G FV Y + E
Sbjct: 144 DDIKE--TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKRE 201
Query: 80 DAERAIIELNGL 91
+A+ AI LN +
Sbjct: 202 EAQEAIAALNNV 213
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+ +F G +++ +V++D +T GFGFV T ++A AI + NGY L ++ L+VS+
Sbjct: 79 LYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSY 138
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP+++T++DL +F G I + R++ D F +G S G
Sbjct: 62 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD---------FKTG------YSYGF 106
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV F + +A A+ NG
Sbjct: 107 GFVNFTREEDAARAIDTFNG 126
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 78 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 137
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 138 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 197
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 198 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 242
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 243 PLSVRLAEE-HGKAKA 257
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 73 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 125
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 126 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 160
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 173 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 232
Query: 334 N 334
N
Sbjct: 233 N 233
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 78 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 137
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 138 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 197
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 198 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 242
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 243 PLSVRLAEE-HGKAKA 257
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 73 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 125
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 126 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 160
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 173 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 232
Query: 334 N 334
N
Sbjct: 233 N 233
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 86 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 145
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 146 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 205
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 206 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 250
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 251 PLSVRLAEE-HGKAKA 265
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 81 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 133
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 134 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 168
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 181 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 240
Query: 334 N 334
N
Sbjct: 241 N 241
>gi|78706522|ref|NP_001027062.1| Sex lethal, isoform O [Drosophila melanogaster]
gi|71854531|gb|AAZ52509.1| Sex lethal, isoform O [Drosophila melanogaster]
Length = 364
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 108 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 167
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 168 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 227
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 228 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 272
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 273 PLSVRLAEE-HGKAKA 287
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 103 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 155
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 156 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 190
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 262
Query: 334 N 334
N
Sbjct: 263 N 263
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 108 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 167
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 168 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 227
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 228 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 272
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 273 PLSVRLAEE-HGKAKA 287
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 103 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 155
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 156 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 190
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 262
Query: 334 N 334
N
Sbjct: 263 N 263
>gi|281359979|ref|NP_001162686.1| Sex lethal, isoform P [Drosophila melanogaster]
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]
gi|272506009|gb|ACZ95222.1| Sex lethal, isoform P [Drosophila melanogaster]
Length = 352
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 118 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 177
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 178 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 237
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 238 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 282
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 283 PLSVRLAEE-HGKAKA 297
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 113 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 165
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 166 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 200
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272
Query: 334 N 334
N
Sbjct: 273 N 273
>gi|78706528|ref|NP_001027065.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|78710139|ref|NP_727162.2| Sex lethal, isoform D [Drosophila melanogaster]
gi|281359987|ref|NP_001162690.1| Sex lethal, isoform T [Drosophila melanogaster]
gi|135080|sp|P19339.1|SXL_DROME RecName: Full=Protein sex-lethal
gi|158426|gb|AAA28884.1| sex-linked protein [Drosophila melanogaster]
gi|158525|gb|AAA28922.1| Sx1 [Drosophila melanogaster]
gi|10728509|gb|AAG22410.1| Sex lethal, isoform D [Drosophila melanogaster]
gi|71854534|gb|AAZ52511.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|272506013|gb|ACZ95226.1| Sex lethal, isoform T [Drosophila melanogaster]
Length = 354
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 118 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 177
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 178 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 237
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 238 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 282
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 283 PLSVRLAEE-HGKAKA 297
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 113 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 165
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 166 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 200
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272
Query: 334 N 334
N
Sbjct: 273 N 273
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 105 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 157
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 158 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 125/193 (64%), Gaps = 16/193 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N +NLIVNY+PQ +T+ EL +FS++G +E+C+++RD T S G+GFVN+ + A+
Sbjct: 84 NNAGTNLIVNYLPQDLTERELYSMFSTMGPIETCRIMRDVKTGYSYGFGFVNFLSEDAAQ 143
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI LNG ++NK +KVSYARP S+ IK NLY++ LP+ +T E L+ +F YGTI+
Sbjct: 144 RAIRCLNGYSVRNKRLKVSYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQK 203
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
IL DK+ +G P +G+ FVRFN+ EA+ A+ LN IP+G ++P+
Sbjct: 204 NILRDKL---------TGFP------RGVAFVRFNKREEAQEAISALNNVIPQGGTQPLI 248
Query: 203 VKFANSPAGRAKA 215
V+ A GRAKA
Sbjct: 249 VRVAED-HGRAKA 260
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + + L+ +F G ++ +++RD +T GFGFV + D A A
Sbjct: 86 AGTNLIVNYLPQDLTERELYSMFSTMGPIETCRIMRDVKTGYSYGFGFVNFLSEDAAQRA 145
Query: 330 IQSLNGYALGDRLLQVSF 347
I+ LNGY++ ++ L+VS+
Sbjct: 146 IRCLNGYSVRNKRLKVSY 163
>gi|78710143|ref|NP_727164.2| Sex lethal, isoform H [Drosophila melanogaster]
gi|22831872|gb|AAF46240.2| Sex lethal, isoform H [Drosophila melanogaster]
Length = 366
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 105 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 157
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 158 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|194763735|ref|XP_001963988.1| GF20968 [Drosophila ananassae]
gi|190618913|gb|EDV34437.1| GF20968 [Drosophila ananassae]
Length = 379
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 121 NDQRPSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 180
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 181 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 240
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 241 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 285
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 286 PLSVRLAEE-HGKAKA 300
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 130 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 189
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 190 NGITVRNKRLKVSY 203
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 216 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 275
Query: 334 N 334
N
Sbjct: 276 N 276
>gi|442615387|ref|NP_001259303.1| Sex lethal, isoform X [Drosophila melanogaster]
gi|440216503|gb|AGB95148.1| Sex lethal, isoform X [Drosophila melanogaster]
Length = 722
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 178
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 179 NGITVRNKRLKVSY 192
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|103381|pir||B39725 sex-lethal sex determination protein MS11 - fruit fly (Drosophila
melanogaster)
gi|158523|gb|AAA28921.1| putative [Drosophila melanogaster]
Length = 366
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 105 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 157
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 158 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|78710119|ref|NP_727160.2| Sex lethal, isoform J [Drosophila melanogaster]
gi|78710165|ref|NP_727166.2| Sex lethal, isoform G [Drosophila melanogaster]
gi|22831874|gb|AAN09198.1| Sex lethal, isoform J [Drosophila melanogaster]
gi|71854533|gb|AAN09200.2| Sex lethal, isoform G [Drosophila melanogaster]
Length = 346
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 275 PLSVRLAEE-HGKAKA 289
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 105 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 157
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 158 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|195439114|ref|XP_002067476.1| GK16445 [Drosophila willistoni]
gi|194163561|gb|EDW78462.1| GK16445 [Drosophila willistoni]
Length = 373
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 114 NDHRPSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 173
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 174 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 233
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 234 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 278
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 279 PLSVRLAEE-HGKAKA 293
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 123 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 182
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 183 NGITVRNKRLKVSY 196
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 209 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 268
Query: 334 N 334
N
Sbjct: 269 N 269
>gi|442615389|ref|NP_001259304.1| Sex lethal, isoform Y [Drosophila melanogaster]
gi|440216504|gb|AGB95149.1| Sex lethal, isoform Y [Drosophila melanogaster]
Length = 708
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 118 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 177
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 178 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 237
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 238 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 282
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 283 PLSVRLAEE-HGKAKA 297
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
DL+N+ P++ S + V L + D L+ LF G + +++RD +T G
Sbjct: 115 DLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFG 167
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 168 YAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 200
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272
Query: 334 N 334
N
Sbjct: 273 N 273
>gi|323301216|gb|ADX35950.1| SD08075p [Drosophila melanogaster]
Length = 322
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 124/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 86 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 145
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG I
Sbjct: 146 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGPI 205
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 206 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 250
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 251 PLSVRLAEE-HGKAKA 265
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 81 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 133
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 134 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 168
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ +T+ EL +F ++G V +CK++RD T S G+GFVNY + +DA RAI
Sbjct: 27 TNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQ 86
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNGL++QNK IKVSYARP E K NLYV+ LP+ +T+++L N+F +G I+ +L
Sbjct: 87 TLNGLQIQNKRIKVSYARPPGEDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLK 146
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK ++G P +G+ FVRF++ EA A++ LNGTIP G + PI+VK A
Sbjct: 147 DK---------ITGMP------RGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISVKIA 191
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+ ++ L+++F G V N K++RD +T GFGFV D+A+ AIQ+L
Sbjct: 29 LIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQTL 88
Query: 334 NGYALGDRLLQVSF 347
NG + ++ ++VS+
Sbjct: 89 NGLQIQNKRIKVSY 102
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 122/189 (64%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFSS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 112 TNLIINYLPQDMTDRELYNLFSSCGSINTCKIMRDFKTGYSFGYGFVDYNAEADSEDAIQ 171
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ E L+ +F P+G I+ IL
Sbjct: 172 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDEMLDRIFSPFGQIVQRNILR 231
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN TIPEG S+PI V+ A
Sbjct: 232 DKL---------TGRP------RGVAFVRYNKREEAQEAIKSLNNTIPEGGSQPIWVRLA 276
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 277 EE-HGKAKA 284
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S + + L + D L+ LF G++ K++RD +T G+GFV ++ A
Sbjct: 110 SATNLIINYLPQDMTDRELYNLFSSCGSINTCKIMRDFKTGYSFGYGFVDYNAEADSEDA 169
Query: 330 IQSLNGYALGDRLLQVSF 347
IQ LNG+ + ++ L+VS+
Sbjct: 170 IQKLNGFYVRNKRLKVSY 187
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D +L ++F PFG + ++RD T + +G FV +EA AI+SL
Sbjct: 200 LYVINLSRNINDEMLDRIFSPFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKSL 259
Query: 334 N 334
N
Sbjct: 260 N 260
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V + + + E L +FS G++ ++RDK T + G FV Y + E+A+ A
Sbjct: 196 KDTNLYVINLSRNINDEMLDRIFSPFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 255
Query: 85 IIELN 89
I LN
Sbjct: 256 IKSLN 260
>gi|221121216|ref|XP_002166224.1| PREDICTED: ELAV-like protein 4-like [Hydra magnipapillata]
Length = 346
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 180/363 (49%), Gaps = 68/363 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+ +IVNY+PQ+M+ +E + LFS G ++ CK+IRDK T S GYGFV+Y + E A AI
Sbjct: 14 TKIIVNYIPQSMSDDEFRQLFSQCGALQECKIIRDKQTNYSFGYGFVDYLKPEFASLAIS 73
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++QNKSIKV+Y++P + K ANLYV+GL KH ++ LE LF YG II +++L
Sbjct: 74 KLNGFQIQNKSIKVAYSKPPGCS-KNANLYVTGLGKHTNEKSLEELFGVYGEIIQTKLLR 132
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
GT SK IGFV F + A++A++ L G +G + +K+A
Sbjct: 133 G----------ADGT------SKEIGFVLFKEKPHADNAIKNLQG-YSDGNGMNLQIKYA 175
Query: 207 NSPAGRAKALAA-NLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL-------- 257
K + N Q R +++ + S + AP +A ++
Sbjct: 176 KDQNENQKQMPKFNGFYQTNMQRMSQSSL------MAESYPYNVAPYSAGVMGRGMDYGG 229
Query: 258 --NNSMLPPKSLHGSG---------------------------WCIFVYNLAPETEDNVL 288
+++M K++ G G +FVYN+ P +D+ L
Sbjct: 230 GYDSAMGIGKAIRGRGVGTRFNPLARPLNSDIGLEQYDPFTESIVLFVYNIGPNAQDSDL 289
Query: 289 WQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
+ LF FG + V V+ KG+GFV M +EA A+ +LNG + LQVS K
Sbjct: 290 YGLFCRFGRINKVNVIAG------KGYGFVHMPVLNEAQAAVNALNGMFYNGKNLQVSVK 343
Query: 349 THK 351
K
Sbjct: 344 ASK 346
>gi|262360006|gb|ACY56908.1| RH48596p [Drosophila melanogaster]
Length = 339
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 124/196 (63%), Gaps = 16/196 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 103 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 162
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 163 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 222
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ L IPEG S+
Sbjct: 223 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALKNVIPEGGSQ 267
Query: 200 PITVKFANSPAGRAKA 215
P++V+ A G+AKA
Sbjct: 268 PLSVRLAEE-HGKAKA 282
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 98 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 150
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 151 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 185
>gi|195041825|ref|XP_001991324.1| GH12116 [Drosophila grimshawi]
gi|193901082|gb|EDV99948.1| GH12116 [Drosophila grimshawi]
Length = 918
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 16/207 (7%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+T +S T S+ +NLI+NY+PQ MT EL +LFSS G + +CK++RD T S
Sbjct: 165 DTQESACPTSNSEDRTSATNLIINYLPQNMTDRELFNLFSSCGSINTCKIMRDYKTGYSF 224
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
GYGFV+Y D+E AI + NGL ++NK +KVSYARP ++IK NLYV L +++ +
Sbjct: 225 GYGFVDYNDETDSEAAIHKFNGLLVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDQ 284
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F P+G I+ IL DK+ +G P +G+ FVR+N+ EA+ A+
Sbjct: 285 LDRIFSPFGLIVQRNILRDKL---------TGRP------RGVAFVRYNKREEAQEAIMA 329
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKA 215
LN T+PEGAS PI V+ A G+AKA
Sbjct: 330 LNNTVPEGASSPIWVRLAEE-HGKAKA 355
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D+ L ++F PFG + ++RD T + +G FV +EA AI +L
Sbjct: 271 LYVINLSRNINDDQLDRIFSPFGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIMAL 330
Query: 334 N 334
N
Sbjct: 331 N 331
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+ D L+ LF G++ K++RD +T G+GFV + ++ AI
Sbjct: 185 LIINYLPQNMTDRELFNLFSSCGSINTCKIMRDYKTGYSFGYGFVDYNDETDSEAAIHKF 244
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 245 NGLLVRNKRLKVSY 258
>gi|27752871|gb|AAO19468.1| sex-lethal [Sciara ocellaris]
Length = 287
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 122/189 (64%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT E LFS+ G +ES +++RD T S GYGFVNY E A+RAI
Sbjct: 73 TNLIVNYLPQDMTDREFYALFSTSGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQRAIK 132
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVS+ARP+ E +K NLYV+ LP+ +T+E L+ +F YG I+ IL
Sbjct: 133 SLNGVTVRNKRLKVSFARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILR 192
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DKM +G P +G+ F+R+N+ EA+ A+ LN IPEG+++P+TV+ A
Sbjct: 193 DKM---------TGKP------RGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVA 237
Query: 207 NSPAGRAKA 215
G+ KA
Sbjct: 238 EE-HGKQKA 245
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL V +P+T+T+E+L +F G + ++RDK T + G F+ Y + E+A+ A
Sbjct: 157 KETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVAFIRYNKREEAQEA 216
Query: 85 IIELNGL 91
I LN +
Sbjct: 217 IAALNNV 223
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
GSG + V L + D + LF G +++ +++RD +T G+GFV + A
Sbjct: 70 GSGTNLIVNYLPQDMTDREFYALFSTSGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQR 129
Query: 329 AIQSLNGYALGDRLLQVSF 347
AI+SLNG + ++ L+VSF
Sbjct: 130 AIKSLNGVTVRNKRLKVSF 148
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 120/187 (64%), Gaps = 15/187 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 274
Query: 200 PITVKFA 206
P++V+ A
Sbjct: 275 PLSVRLA 281
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 253 TADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC 312
+ DL+N+ P++ S + V L + D L+ LF G + +++RD +T
Sbjct: 105 SDDLMND----PRA---SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 157
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
G+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 158 FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 334 N 334
N
Sbjct: 265 N 265
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 118/181 (65%), Gaps = 15/181 (8%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++ D++RAI
Sbjct: 3 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAI 62
Query: 86 IELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I+ IL
Sbjct: 63 KVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNIL 122
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+P++V+
Sbjct: 123 RDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 167
Query: 206 A 206
A
Sbjct: 168 A 168
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T ++L +F G + ++RDK T + G FV Y + E+A+ A
Sbjct: 88 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 147
Query: 85 IIELNGL 91
I LN +
Sbjct: 148 ISALNNV 154
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S + V L + D L+ LF G + +++RD +T G+ FV T+ ++ A
Sbjct: 2 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRA 61
Query: 330 IQSLNGYALGDRLLQVSF 347
I+ LNG + ++ L+VS+
Sbjct: 62 IKVLNGITVRNKRLKVSY 79
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 92 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 151
Query: 334 N 334
N
Sbjct: 152 N 152
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 18/197 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 101 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 160
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 161 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILR 220
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 221 DKL---------TGRP------RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 265
Query: 207 NSPAGRAKALAANLNAQ 223
KA AA AQ
Sbjct: 266 EE---HGKAKAAQFMAQ 279
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ + L + D L+ LF G + K++RD +T G+GFV ++ AIQ L
Sbjct: 103 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL 162
Query: 334 NGYALGDRLLQVSF 347
NG+ + ++ L+VS+
Sbjct: 163 NGFYVRNKRLKVSY 176
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D++L ++F P+G + ++RD T + +G FV +EA AI++L
Sbjct: 189 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL 248
Query: 334 N 334
N
Sbjct: 249 N 249
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V + + + + L +FS G + ++RDK T + G FV Y + E+A+ A
Sbjct: 185 KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 244
Query: 85 IIELN 89
I LN
Sbjct: 245 IKALN 249
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 121/189 (64%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 152
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 153 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILR 212
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 213 DKL---------TGRP------RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 257
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 258 -EEHGKAKA 265
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S + + L + D L+ LF G + K++RD +T G+GFV ++ A
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDA 150
Query: 330 IQSLNGYALGDRLLQVSF 347
IQ LNG+ + ++ L+VS+
Sbjct: 151 IQKLNGFYVRNKRLKVSY 168
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D++L ++F P+G + ++RD T + +G FV +EA AI++L
Sbjct: 181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL 240
Query: 334 N 334
N
Sbjct: 241 N 241
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V + + + + L +FS G + ++RDK T + G FV Y + E+A+ A
Sbjct: 177 KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 236
Query: 85 IIELN 89
I LN
Sbjct: 237 IKALN 241
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 18/197 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 152
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 153 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILR 212
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 213 DKL---------TGRP------RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 257
Query: 207 NSPAGRAKALAANLNAQ 223
KA AA AQ
Sbjct: 258 EE---HGKAKAAQFMAQ 271
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S + + L + D L+ LF G + K++RD +T G+GFV ++ A
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDA 150
Query: 330 IQSLNGYALGDRLLQVSF 347
IQ LNG+ + ++ L+VS+
Sbjct: 151 IQKLNGFYVRNKRLKVSY 168
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D++L ++F P+G + ++RD T + +G FV +EA AI++L
Sbjct: 181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL 240
Query: 334 N 334
N
Sbjct: 241 N 241
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V + + + + L +FS G + ++RDK T + G FV Y + E+A+ A
Sbjct: 177 KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 236
Query: 85 IIELN 89
I LN
Sbjct: 237 IKALN 241
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 18/197 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 113 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 172
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 173 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILR 232
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 233 DKL---------TGRP------RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 277
Query: 207 NSPAGRAKALAANLNAQ 223
KA AA AQ
Sbjct: 278 EE---HGKAKAAQFMAQ 291
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ + L + D L+ LF G + K++RD +T G+GFV ++ AIQ L
Sbjct: 115 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL 174
Query: 334 NGYALGDRLLQVSF 347
NG+ + ++ L+VS+
Sbjct: 175 NGFYVRNKRLKVSY 188
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D++L ++F P+G + ++RD T + +G FV +EA AI++L
Sbjct: 201 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL 260
Query: 334 N 334
N
Sbjct: 261 N 261
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V + + + + L +FS G + ++RDK T + G FV Y + E+A+ A
Sbjct: 197 KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 256
Query: 85 IIELN 89
I LN
Sbjct: 257 IKALN 261
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 18/197 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 152
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 153 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILR 212
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 213 DKL---------TGRP------RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 257
Query: 207 NSPAGRAKALAANLNAQ 223
KA AA AQ
Sbjct: 258 EE---HGKAKAAQFMAQ 271
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ + L + D L+ LF G + K++RD +T G+GFV ++ AIQ L
Sbjct: 95 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL 154
Query: 334 NGYALGDRLLQVSF 347
NG+ + ++ L+VS+
Sbjct: 155 NGFYVRNKRLKVSY 168
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D++L ++F P+G + ++RD T + +G FV +EA AI++L
Sbjct: 181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL 240
Query: 334 N 334
N
Sbjct: 241 N 241
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V + + + + L +FS G + ++RDK T + G FV Y + E+A+ A
Sbjct: 177 KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 236
Query: 85 IIELN 89
I LN
Sbjct: 237 IKALN 241
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 116/180 (64%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF + G + +C++++D T S GY FV++ DA+ AI
Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 161
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T ++LE +F YG I+ IL
Sbjct: 162 SLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 221
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 222 DKL---------TGKP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T +EL+ +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 186 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 245
Query: 85 IIELN 89
I LN
Sbjct: 246 ISALN 250
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L ++FG +G + ++RD T K +G FV +EA AI +L
Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 249
Query: 334 N 334
N
Sbjct: 250 N 250
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + ++++D +T G+ FV + +A A
Sbjct: 100 NGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 159
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VS+
Sbjct: 160 IKSLNGVTVRNKRLKVSY 177
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 116/180 (64%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF + G + +C++++D T S GY FV++ DA+ AI
Sbjct: 85 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 144
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T ++LE +F YG I+ IL
Sbjct: 145 SLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 204
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 205 DKL---------TGKP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 249
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T +EL+ +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 169 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 228
Query: 85 IIELNGL 91
I LN +
Sbjct: 229 ISALNNV 235
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + ++++D +T G+ FV + +A A
Sbjct: 83 NGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 142
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VS+
Sbjct: 143 IKSLNGVTVRNKRLKVSY 160
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L ++FG +G + ++RD T K +G FV +EA AI +L
Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232
Query: 334 N 334
N
Sbjct: 233 N 233
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 116/180 (64%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF + G + +C++++D T S GY FV++ DA+ AI
Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 161
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T ++LE +F YG I+ IL
Sbjct: 162 SLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 221
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 222 DKL---------TGKP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T +EL+ +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 186 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 245
Query: 85 IIELN 89
I LN
Sbjct: 246 ISALN 250
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L ++FG +G + ++RD T K +G FV +EA AI +L
Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 249
Query: 334 N 334
N
Sbjct: 250 N 250
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + ++++D +T G+ FV + +A A
Sbjct: 100 NGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 159
Query: 330 IQSLNGYALGDRLLQVSF 347
I+SLNG + ++ L+VS+
Sbjct: 160 IKSLNGVTVRNKRLKVSY 177
>gi|194763555|ref|XP_001963898.1| GF21012 [Drosophila ananassae]
gi|190618823|gb|EDV34347.1| GF21012 [Drosophila ananassae]
Length = 757
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 18/197 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI+
Sbjct: 108 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKSEADSEDAIL 167
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV LP+++ L+ +F +G I+ IL
Sbjct: 168 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLPRNINDAMLDRIFSAFGQIVQRNILR 227
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR+N+ EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 228 DKL---------TGRP------RGVAFVRYNKREEAQEAIKTLNNTVPEGGSQPIWVRLA 272
Query: 207 NSPAGRAKALAANLNAQ 223
KA AA AQ
Sbjct: 273 EE---HGKAKAAQFMAQ 286
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+ + L +FS+ G++ ++RDK T + G FV Y + E+A+ A
Sbjct: 192 KDTNLYVINLPRNINDAMLDRIFSAFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 251
Query: 85 IIELN 89
I LN
Sbjct: 252 IKTLN 256
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ + L + D L+ LF G + K++RD +T G+GFV + ++ AI L
Sbjct: 110 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKSEADSEDAILKL 169
Query: 334 NGYALGDRLLQVSF 347
NG+ + ++ L+VS+
Sbjct: 170 NGFYVRNKRLKVSY 183
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D +L ++F FG + ++RD T + +G FV +EA AI++L
Sbjct: 196 LYVINLPRNINDAMLDRIFSAFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKTL 255
Query: 334 N 334
N
Sbjct: 256 N 256
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 15/180 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF + G + +C++++D T S GY FV++ DA+ AI
Sbjct: 95 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 154
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+NG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T ++LE +F YG I+ IL
Sbjct: 155 TVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 214
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 215 DKL---------TGRP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 259
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T +EL+ +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 179 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEA 238
Query: 85 IIELNGL 91
I LN +
Sbjct: 239 ISALNNV 245
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 107 SEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQ 166
++A+ NL V+ LP+ MT +L LFR G I T RI+ D + +G
Sbjct: 89 TQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKD---------YKTG------ 133
Query: 167 ISKGIGFVRFNQHIEAEHAMQELNG 191
S G FV F I+A++A++ +NG
Sbjct: 134 YSFGYAFVDFASEIDAQNAIKTVNG 158
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L ++FG +G + ++RD T + +G FV +EA AI +L
Sbjct: 183 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 242
Query: 334 N 334
N
Sbjct: 243 N 243
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + ++++D +T G+ FV + +A A
Sbjct: 93 NGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 152
Query: 330 IQSLNGYALGDRLLQVSF 347
I+++NG + ++ L+VS+
Sbjct: 153 IKTVNGITVRNKRLKVSY 170
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF + G + +C++++D T S GY FV++ DA+ AI
Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 161
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+NG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T ++LE +F YG I+ IL
Sbjct: 162 TVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 221
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRFN+ EA+ A+ LN IPEGAS+P+TV+ A
Sbjct: 222 DKL---------TGRP------RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
Query: 207 NSPAGRAKA 215
G+ KA
Sbjct: 267 EE-HGKMKA 274
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+T+T +EL+ +F G + ++RDK T + G FV + + E+A+ A
Sbjct: 186 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEA 245
Query: 85 IIELNGL 91
I LN +
Sbjct: 246 ISALNNV 252
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 107 SEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQ 166
++A+ NL V+ LP+ MT +L LFR G I T RI+ D + +G
Sbjct: 96 TQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKD---------YKTG------ 140
Query: 167 ISKGIGFVRFNQHIEAEHAMQELNG 191
S G FV F I+A++A++ +NG
Sbjct: 141 YSFGYAFVDFASEIDAQNAIKTVNG 165
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L ++FG +G + ++RD T + +G FV +EA AI +L
Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249
Query: 334 N 334
N
Sbjct: 250 N 250
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
+G + V L + D L+ LF G + ++++D +T G+ FV + +A A
Sbjct: 100 NGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 159
Query: 330 IQSLNGYALGDRLLQVSF 347
I+++NG + ++ L+VS+
Sbjct: 160 IKTVNGITVRNKRLKVSY 177
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 16/201 (7%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
+ +NLI+NY+PQ +T+ EL +F ++G V +CK++RD T S G+GFVNY + +DA
Sbjct: 23 DSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAI 82
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP-KHMTQEDLENLFRPYGTIIT 141
RAI LNGL++QNK IKVSYARP E K NLYV+ LP + +T+++L N+F +G I+
Sbjct: 83 RAIQTLNGLQIQNKRIKVSYARPPGEDRKETNLYVTNLPSRDVTEDELTNIFSAHGNIVQ 142
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+L DK ++G P +G+ FVRF++ EA A++ LNGTIP G + PI
Sbjct: 143 MNLLKDK---------ITGMP------RGVAFVRFDKREEALAAIEHLNGTIPHGRTNPI 187
Query: 202 TVKFANSPAGRAKALAANLNA 222
+VK A + A A A
Sbjct: 188 SVKIAEEHGKQKAAYFAGWEA 208
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+++F G V N K++RD +T GFGFV D+A+ AIQ+LNG + ++ ++VS+
Sbjct: 43 LFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQTLNGLQIQNKRIKVSY 102
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 19/200 (9%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
M N+T S S N +NLIVNY+PQ M EL LF ++G + +C+++RD T
Sbjct: 62 MANSTNS----LNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGY 117
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
S GYGFV++ DA RAI LNG+ ++NK IKVS+ARP E ++ NLYV+ L + +T
Sbjct: 118 SYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRSITD 177
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E LE +F YG I+ IL DK +GTP +G+ F+RFN+ EA+ A+
Sbjct: 178 EQLETIFGKYGQIVQKNILRDKH---------TGTP------RGVAFIRFNKREEAQEAI 222
Query: 187 QELNGTIPEGASEPITVKFA 206
LN IPEG ++P+TV+ A
Sbjct: 223 SALNNVIPEGGTQPLTVRVA 242
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG + V L + +D L+ LF G + +++RD +T G+GFV + +A+ A
Sbjct: 76 SGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRA 135
Query: 330 IQSLNGYALGDRLLQVSF 347
I +LNG + ++ ++VSF
Sbjct: 136 INNLNGITVRNKRIKVSF 153
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D L +FG +G + ++RD T +G F+ +EA AI +L
Sbjct: 166 LYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISAL 225
Query: 334 N 334
N
Sbjct: 226 N 226
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 15/187 (8%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ T EL LF ++G + +C++ RD T S GY FV++
Sbjct: 8 NDPRASNTNLIVNYLPQDXTDRELYALFRAIGPINTCRIXRDYKTGYSFGYAFVDFTSEX 67
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 68 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 127
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ IL DK+ +G P +G+ FVR+N+ EA+ A+ LN IPEG S+
Sbjct: 128 VQKNILRDKL---------TGRP------RGVAFVRYNKREEAQEAISALNNVIPEGGSQ 172
Query: 200 PITVKFA 206
P++V+ A
Sbjct: 173 PLSVRLA 179
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
DL+N+ P++ S + V L + D L+ LF G + ++ RD +T G
Sbjct: 5 DLMND----PRA---SNTNLIVNYLPQDXTDRELYALFRAIGPINTCRIXRDYKTGYSFG 57
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ FV T+ ++ AI+ LNG + ++ L+VS+
Sbjct: 58 YAFVDFTSEXDSQRAIKVLNGITVRNKRLKVSY 90
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL D+ L +FG +G++ ++RD T + +G FV +EA AI +L
Sbjct: 103 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 162
Query: 334 N 334
N
Sbjct: 163 N 163
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 19/200 (9%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
M N+T S S N +NLIVNY+PQ M EL LF ++G + +C+++RD T
Sbjct: 48 MANSTNS----LNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGY 103
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
S GYGFV++ DA RAI LNG+ ++NK IKVS+ARP E ++ NLYV+ L + +T
Sbjct: 104 SYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRSITD 163
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E LE +F YG I+ IL DK +GTP +G+ F+RFN+ EA+ A+
Sbjct: 164 EQLETIFGKYGQIVQKNILRDKH---------TGTP------RGVAFIRFNKREEAQEAI 208
Query: 187 QELNGTIPEGASEPITVKFA 206
LN IPEG ++P+TV+ A
Sbjct: 209 SALNNVIPEGGTQPLTVRVA 228
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG + V L + +D L+ LF G + +++RD +T G+GFV + +A+ A
Sbjct: 62 SGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRA 121
Query: 330 IQSLNGYALGDRLLQVSF 347
I +LNG + ++ ++VSF
Sbjct: 122 INNLNGITVRNKRIKVSF 139
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D L +FG +G + ++RD T +G F+ +EA AI +L
Sbjct: 152 LYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISAL 211
Query: 334 N 334
N
Sbjct: 212 N 212
>gi|441628930|ref|XP_003275701.2| PREDICTED: ELAV-like protein 3 [Nomascus leucogenys]
Length = 364
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 135/242 (55%), Gaps = 37/242 (15%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQ++ ++LF G I + +++ DK+ +++ G
Sbjct: 154 KTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSL---------------GY 198
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
GFV ++ +A+ A+ LNG + + + F+N P L LN R
Sbjct: 199 GFVNYSDPNDADKAINTLNGLKLQTKTIKVGASFSNPPNSTTLELDNLLNMAYGVKR--- 255
Query: 232 AAMRHFGNPLHHSARFKFAPLTADLLNN--SMLPPKSLHGSGWCIFVYNLAPETEDNVLW 289
F+P+ D ++ + G+GWCIFVYNL+PE +++VLW
Sbjct: 256 -----------------FSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLW 298
Query: 290 QLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKT 349
QLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI SLNGY LG+R+LQVSFKT
Sbjct: 299 QLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKT 358
Query: 350 HK 351
K
Sbjct: 359 SK 360
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 103/210 (49%), Gaps = 55/210 (26%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
++ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA
Sbjct: 150 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 209
Query: 82 ERAIIELNGLKLQNKSIKV--SYARPSSE-------------AIKRAN------------ 114
++AI LNGLKLQ K+IKV S++ P + +KR +
Sbjct: 210 DKAINTLNGLKLQTKTIKVGASFSNPPNSTTLELDNLLNMAYGVKRFSPIAIDGMSGLAG 269
Query: 115 -------------LYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGT 161
++V L + L LF P+G + ++ +R F +
Sbjct: 270 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV---------IRDFTT-- 318
Query: 162 PEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
KG GFV + EA A+ LNG
Sbjct: 319 ----NKCKGFGFVTMTNYDEAAMAIASLNG 344
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 284 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 342
Query: 89 NGLKLQNKSIKVSY 102
NG +L + ++VS+
Sbjct: 343 NGYRLGERVLQVSF 356
>gi|29569920|gb|AAO84924.1| elav protein [Drosophila miranda]
Length = 181
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 29/191 (15%)
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA----LAANLNAQAAAMR 228
F+RF++ EA A+ LNGT P ++PI VKF+N+P +K L A LN Q
Sbjct: 1 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQL---- 56
Query: 229 HFAAAMRHFGNPLH---HSARFKFAPLTADLLNNSMLP------------PKSLHGSGWC 273
+R G +H + +F+P+ D+L+ MLP S G +
Sbjct: 57 -----VRRIGGAMHTPVNKGLARFSPMAGDMLD-VMLPNGLGAAAAAATTLASGPGGAYP 110
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IF+YNLAPETE+ LWQLFGPFGAVQ+VK+V+DP T +CKG+GFV MTNYDEA AI++L
Sbjct: 111 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 170
Query: 334 NGYALGDRLLQ 344
NGY +G+R+LQ
Sbjct: 171 NGYTMGNRVLQ 181
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
I N P+T + L LF G V+S K+++D TT Q GYGFV+ ++A AI L
Sbjct: 112 FIYNLAPET-EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 170
Query: 89 NGLKLQNKSIK 99
NG + N+ ++
Sbjct: 171 NGYTMGNRVLQ 181
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 15/185 (8%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
M ++EL LF ++G VESC++++D T S G+GFVNY + EDA AI LNGL++QNK
Sbjct: 1 MNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKR 60
Query: 98 IKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
+KVS+ARPS E IK NLYV+ LP+++T+ ++ +F YG I+ IL DK+
Sbjct: 61 LKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKL-------- 112
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
+G P +G+ FVRF++ EA+ A+ +L+GTIPEG SEP++VK A + A
Sbjct: 113 -TGLP------RGVAFVRFDKREEAQEAIAQLHGTIPEGGSEPLSVKIAEEHGKQKAAYY 165
Query: 218 ANLNA 222
A A
Sbjct: 166 AGWQA 170
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL V +P+ +T+ ++ +FS G + +++DK T G FV + + E+A+ A
Sbjct: 74 KETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEA 133
Query: 85 IIELNG 90
I +L+G
Sbjct: 134 IAQLHG 139
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L+ LF G V++ +V++D +T GFGFV ++A AI +LNG + ++ L+VSF
Sbjct: 6 LYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSF 65
>gi|195133248|ref|XP_002011051.1| GI16327 [Drosophila mojavensis]
gi|193907026|gb|EDW05893.1| GI16327 [Drosophila mojavensis]
Length = 716
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 120/205 (58%), Gaps = 21/205 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL LFSS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 250 TNLIINYLPQDMTDRELYRLFSSCGSINTCKIMRDYKTGYSFGYGFVDYNSEVDSEEAIQ 309
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 310 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDQLDRIFSPYGLIVQRNILR 369
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVR EA+ A++ LN T+PEG S+PI V+ A
Sbjct: 370 DKL---------TGRP------RGVAFVRGE---EAQEAIKALNNTVPEGGSQPIWVRLA 411
Query: 207 NSPAGRAKALAANLNAQAAAMRHFA 231
KA AA +Q H
Sbjct: 412 EE---HGKAKAAQFMSQIGGGPHMG 433
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S + + L + D L++LF G++ K++RD +T G+GFV + ++ A
Sbjct: 248 SATNLIINYLPQDMTDRELYRLFSSCGSINTCKIMRDYKTGYSFGYGFVDYNSEVDSEEA 307
Query: 330 IQSLNGYALGDRLLQVSF 347
IQ LNG+ + ++ L+VS+
Sbjct: 308 IQKLNGFYVRNKRLKVSY 325
>gi|241752336|ref|XP_002401050.1| RNA-binding protein precursor, putative [Ixodes scapularis]
gi|215508305|gb|EEC17759.1| RNA-binding protein precursor, putative [Ixodes scapularis]
Length = 195
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 116/198 (58%), Gaps = 19/198 (9%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
+ DV +NLI+NY+PQT+T EE + LF+S+G ++S K++R K T S G+GFV+Y
Sbjct: 2 EGDVGNSQTNLIINYLPQTLTDEEFRSLFTSIGPIKSSKIVRHKATGYSYGFGFVDYQSI 61
Query: 79 EDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
EDA RA+ LNGL+LQNK IKV+YARP E IK ANLY+ G+PKH E E LF +G
Sbjct: 62 EDAARAVGTLNGLQLQNKKIKVAYARPGGETIKHANLYIRGIPKHYPPEQAEKLFADFGR 121
Query: 139 IITSRILCDKMASEN-----------VRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
+I R+L D S N +R +G +SKG GFV + + A++
Sbjct: 122 LIQFRVLKDDSGSGNKGYGSVTKVNIIRDTSTG------LSKGFGFVTMANYQDCVWAIE 175
Query: 188 ELNGTIPEGASEPITVKF 205
LNG A P+ V F
Sbjct: 176 ALNGF--RYAGRPLQVSF 191
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 59/243 (24%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL ++ LP+ +T E+ +LF G I +S+I+ K S G
Sbjct: 9 QTNLIINYLPQTLTDEEFRSLFTSIGPIKSSKIVRHKATG---------------YSYGF 53
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
GFV + +A A+ LNG + ++ I V +A P G ++H
Sbjct: 54 GFVDYQSIEDAARAVGTLNGL--QLQNKKIKVAYAR-PGGET-------------IKHAN 97
Query: 232 AAMRHFGNPLHH---SARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVL 288
+R G P H+ A FA L+ +L S G+
Sbjct: 98 LYIR--GIPKHYPPEQAEKLFADF-GRLIQFRVLKDDSGSGNKG---------------- 138
Query: 289 WQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
+G+V V ++RD T KGFGFV M NY + V+AI++LNG+ R LQVSFK
Sbjct: 139 ------YGSVTKVNIIRDTSTGLSKGFGFVTMANYQDCVWAIEALNGFRYAGRPLQVSFK 192
Query: 349 THK 351
K
Sbjct: 193 QPK 195
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGE--------------------VESCKLIRDKTT 64
+++NL + +P+ E+ + LF+ G V +IRD +T
Sbjct: 94 KHANLYIRGIPKHYPPEQAEKLFADFGRLIQFRVLKDDSGSGNKGYGSVTKVNIIRDTST 153
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARP 105
S G+GFV +D AI LNG + + ++VS+ +P
Sbjct: 154 GLSKGFGFVTMANYQDCVWAIEALNGFRYAGRPLQVSFKQP 194
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF++ G + +CK++RD T S GYGFV+Y D E AI
Sbjct: 120 TNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADTEEAID 179
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNGL ++NK +KVSYARP ++IK NLYV LP+++ + L F P+G I+ IL
Sbjct: 180 KLNGLYVRNKRLKVSYARPGGQSIKDTNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILR 239
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRF++ EA+ A+ LN T+P G ++PI V+ A
Sbjct: 240 DKL---------TGRP------RGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVRLA 284
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 285 EE-HGKAKA 292
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L++LF FG + K++RD +T G+GFV + AI L
Sbjct: 122 LIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADTEEAIDKL 181
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 182 NGLYVRNKRLKVSY 195
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL +D++L + F PFG + ++RD T + +G FV + +EA A+ +L
Sbjct: 208 LYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALNTL 267
Query: 334 N 334
N
Sbjct: 268 N 268
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+ + + L FS G++ ++RDK T + G FV + + E+A+ A
Sbjct: 204 KDTNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDA 263
Query: 85 IIELN 89
+ LN
Sbjct: 264 LNTLN 268
>gi|195162221|ref|XP_002021954.1| GL14245 [Drosophila persimilis]
gi|194103852|gb|EDW25895.1| GL14245 [Drosophila persimilis]
Length = 618
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 16/189 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MT EL LF++ G + +CK++RD T S GYGFV+Y D E AI
Sbjct: 120 TNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADTEEAID 179
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNGL ++NK +KVSYARP ++IK NLYV LP+++ + L F P+G I+ IL
Sbjct: 180 KLNGLYVRNKRLKVSYARPGGQSIKDTNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILR 239
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
DK+ +G P +G+ FVRF++ EA+ A+ LN T+P G ++PI V+ A
Sbjct: 240 DKL---------TGRP------RGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVRLA 284
Query: 207 NSPAGRAKA 215
G+AKA
Sbjct: 285 EE-HGKAKA 292
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S + V L + D L++LF FG + K++RD +T G+GFV + A
Sbjct: 118 SSTNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADTEEA 177
Query: 330 IQSLNGYALGDRLLQVSF 347
I LNG + ++ L+VS+
Sbjct: 178 IDKLNGLYVRNKRLKVSY 195
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL +D++L + F PFG + ++RD T + +G FV + +EA A+ +L
Sbjct: 208 LYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALNTL 267
Query: 334 N 334
N
Sbjct: 268 N 268
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+++NL V +P+ + + L FS G++ ++RDK T + G FV + + E+A+ A
Sbjct: 204 KDTNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDA 263
Query: 85 IIELN 89
+ LN
Sbjct: 264 LNTLN 268
>gi|608535|gb|AAA96941.1| ribonucleoprotein, partial [Mus musculus]
Length = 174
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 27/198 (13%)
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
Q+D+E++F +G II SR+L D+ +S+G+ F+RF++ EAE A
Sbjct: 1 QKDVEDMFSRFGRIINSRVLVDQTTG---------------LSRGVAFIRFDKRSEAEEA 45
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH-FAAAMRHFGNPLHHS 244
+ G P G+SEPITVKFA +P N N A + + + R FG P+HH
Sbjct: 46 ITSFIGHKPPGSSEPITVKFAANP---------NQNKNMALLSQLYHSPARRFGGPVHHQ 96
Query: 245 A-RFKFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
A RF+F+P+ D ++ S + SGWCIF+YNL + ++ +LWQ+FGPFGAV NVK
Sbjct: 97 AQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVK 156
Query: 303 VVRDPQTYKCKGFGFVCM 320
V+RD T KCKGFGFV M
Sbjct: 157 VIRDFNTNKCKGFGFVTM 174
>gi|256089346|ref|XP_002580772.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
gi|353230889|emb|CCD77306.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 414
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 169/348 (48%), Gaps = 42/348 (12%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
NLI+NY+P ++T +L +LFSSVG +++C++IRD+ + S G+GF Y ++ A +AI
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGAIKTCRIIRDRNSGSSFGFGFCEYEDSDSAHKAISR 67
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
NG ++ +K +KVS A+ + +NLYV P +T+ DL F +G ++ RIL D
Sbjct: 68 FNGYRIADKILKVSLAKLQGRLCQSSNLYVKNFPPTLTEHDLTAEFGQFGPVVQCRILRD 127
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP--ITVKF 205
+ +SKG +V F +AE A + L+ G+++ +++KF
Sbjct: 128 HDTN---------------VSKGSAYVLFENPADAEAAKRSLDARAWPGSTDNQMLSIKF 172
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP-- 263
A P ++ +L + N H G P+ + + F P + +N LP
Sbjct: 173 ATPPYRQSVSLTKSRNNFRRPFLHQQNLRNVQGCPIITNVQNTFYPTLSQQQSN--LPTK 230
Query: 264 -----------------PKSL---HGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV 303
PKS +++YN+ TE + + LF FG + NV +
Sbjct: 231 ISDATCKQSNDFSHFGRPKSTKIDKNESTSVYIYNIGNMTEAQI-FVLFSQFGPILNVSI 289
Query: 304 VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+D +T + FGFV +N+ A +I +NG L R LQVSF+ K
Sbjct: 290 PKDYKTNSSRNFGFVTYSNFQSAQNSIDIMNGSLLSGRRLQVSFRQSK 337
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q+SNL V P T+T+ +L F G V C+++RD T S G +V + DAE A
Sbjct: 91 QSSNLYVKNFPPTLTEHDLTAEFGQFGPVVQCRILRDHDTNVSKGSAYVLFENPADAEAA 150
Query: 85 IIELNGL----KLQNKSIKVSYARP 105
L+ N+ + + +A P
Sbjct: 151 KRSLDARAWPGSTDNQMLSIKFATP 175
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D NE S I N MT+ ++ LFS G + + + +D T S +GFV Y +
Sbjct: 254 DKNESTSVYIYNI--GNMTEAQIFVLFSQFGPILNVSIPKDYKTNSSRNFGFVTYSNFQS 311
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVS 118
A+ +I +NG L + ++VS+ + + K +L S
Sbjct: 312 AQNSIDIMNGSLLSGRRLQVSFRQSKGKWTKYGSLSSS 349
>gi|195399021|ref|XP_002058119.1| GJ15667 [Drosophila virilis]
gi|194150543|gb|EDW66227.1| GJ15667 [Drosophila virilis]
Length = 428
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 128/216 (59%), Gaps = 23/216 (10%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
++ R+ Y+++ +E + + + MT EL +LFSS G + +CK++RD T S GY
Sbjct: 6 SKKQRAKYKTEEDEGS-----DVEDKDMTDRELYNLFSSCGSINTCKIMRDYKTGYSFGY 60
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLE 130
GFV+Y D+E AI++LNG ++NK +KVSYARP ++IK NLYV L +++ + L+
Sbjct: 61 GFVDYNSEADSEDAILKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDQLD 120
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+F PYG I+ IL DK+ +G P +G+ FVR+N+ EA+ A++ LN
Sbjct: 121 RIFSPYGLIVQRNILRDKL---------TGRP------RGVAFVRYNKREEAQEAIKALN 165
Query: 191 GTIPEGASEPITVKFANSPAGRAKALAANLNAQAAA 226
T+PEG S+PI V+ A KA AA +Q A
Sbjct: 166 NTVPEGGSQPIWVRLAEE---HGKAKAAQFMSQIAG 198
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 282 ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDR 341
+ D L+ LF G++ K++RD +T G+GFV + ++ AI LNG+ + ++
Sbjct: 27 DMTDRELYNLFSSCGSINTCKIMRDYKTGYSFGYGFVDYNSEADSEDAILKLNGFYVRNK 86
Query: 342 LLQVSF 347
L+VS+
Sbjct: 87 RLKVSY 92
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ D+ L ++F P+G + ++RD T + +G FV +EA AI++L
Sbjct: 105 LYVINLSRNINDDQLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL 164
Query: 334 N 334
N
Sbjct: 165 N 165
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 17/215 (7%)
Query: 2 MKHEEMYNTTQSHRSTYQSD-VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIR 60
M+ E N Q+ + D V S LIVNY+PQ T+E+L +F+ +G VES K++R
Sbjct: 1 MQQENAANGPQNDLNVGAGDQVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMR 60
Query: 61 DKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
D T S G+GFV Y+ EDA +AI +NG+ +NK +KVSY+RP +K +NLY++ L
Sbjct: 61 DYNTGYSFGFGFVKYFNEEDAAKAIQVINGMNYKNKRLKVSYSRPPGADMKASNLYITNL 120
Query: 121 PKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHI 180
PK +T++D+ LF YG II +L DK ++G P +G+ FVRF++
Sbjct: 121 PKDVTEDDVHRLFSNYGEIIQKSVLKDK---------ITGMP------RGVAFVRFSRGE 165
Query: 181 EAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA 215
EA+ A+ +L+G + E A P++V+ A GR KA
Sbjct: 166 EAKAAIADLDGKLLENAMLPLSVRVAED-HGRQKA 199
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ TE++ L +F P G V+++K++RD T GFGFV N ++A AIQ
Sbjct: 29 LIVNYIPQFATEED-LALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAAKAIQV 87
Query: 333 LNGYALGDRLLQVSF 347
+NG ++ L+VS+
Sbjct: 88 INGMNYKNKRLKVSY 102
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 17/215 (7%)
Query: 2 MKHEEMYNTTQSHRSTYQSD-VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIR 60
M+ E N Q+ + D V S LIVNY+PQ T+E+L +F+ +G VES K++R
Sbjct: 1 MQQENAANGPQNDLNVGAGDQVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMR 60
Query: 61 DKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
D T S G+GFV Y+ EDA +AI +NG+ +NK +KVSY+RP +K +NLY++ L
Sbjct: 61 DYNTGYSFGFGFVKYFNEEDAAKAIQVINGMNYKNKRLKVSYSRPPGADMKASNLYITNL 120
Query: 121 PKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHI 180
PK +T++D+ LF YG II +L DK ++G P +G+ FVRF++
Sbjct: 121 PKDVTEDDVHRLFSNYGEIIQKSVLKDK---------ITGMP------RGVAFVRFSRGE 165
Query: 181 EAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA 215
EA+ A+ +L+G + E A P++V+ A GR KA
Sbjct: 166 EAKAAIADLDGKLLENAMLPLSVRVAED-HGRQKA 199
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 275 FVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+ N P+ TE++ L +F P G V+++K++RD T GFGFV N ++A AIQ
Sbjct: 29 LIVNYIPQFATEED-LALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAAKAIQV 87
Query: 333 LNGYALGDRLLQVSF 347
+NG ++ L+VS+
Sbjct: 88 INGMNYKNKRLKVSY 102
>gi|198425734|ref|XP_002119812.1| PREDICTED: similar to HUC, partial [Ciona intestinalis]
Length = 408
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%), Gaps = 16/187 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ +NLIVNY+PQT++ +E LF++VG V S ++IRDK + S GYGFV+Y + EDA+
Sbjct: 79 NQAQTNLIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQSGYSFGYGFVDYVKPEDAD 138
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+AI +LNG +Q+K+IKV++++P+ K NLYV+GL ++E L+ F YGTII +
Sbjct: 139 KAIQQLNGHPIQHKTIKVAFSKPAGADSKNINLYVAGLNPDTSEESLKQRFSSYGTIIQT 198
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI-PEGASEPI 201
R+L DK + + GIGFV FN EA A++ LNG + + ++ P+
Sbjct: 199 RVLKDKNTN---------------LCSGIGFVLFNTKDEAMAAIKALNGAVFSQASTSPL 243
Query: 202 TVKFANS 208
VKFA +
Sbjct: 244 VVKFAKT 250
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 81/228 (35%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP+ ++ ++ LF G + ++RI+ DK + S G
Sbjct: 82 QTNLIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQSG---------------YSFGY 126
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPI---TVKFANS-PAGRAKALAANLNAQAAAM 227
GFV + + +A+ A+Q+LNG PI T+K A S PAG A + N+N
Sbjct: 127 GFVDYVKPEDADKAIQQLNG-------HPIQHKTIKVAFSKPAG---ADSKNIN------ 170
Query: 228 RHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNV 287
++V L P+T +
Sbjct: 171 ----------------------------------------------LYVAGLNPDTSEES 184
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
L Q F +G + +V++D T C G GFV DEA+ AI++LNG
Sbjct: 185 LKQRFSSYGTIIQTRVLKDKNTNLCSGIGFVLFNTKDEAMAAIKALNG 232
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P+T D +QLF GAV + +++RD Q+ G+GFV ++A AIQ L
Sbjct: 85 LIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQSGYSFGYGFVDYVKPEDADKAIQQL 144
Query: 334 NGYALGDRLLQVSF 347
NG+ + + ++V+F
Sbjct: 145 NGHPIQHKTIKVAF 158
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
S G ++VY + P T++N LW LF FG + V V+ D
Sbjct: 367 SAQAEGRIVYVYGIGPYTDENALWHLFFNFGTIVRVNVIYD 407
>gi|328866616|gb|EGG14999.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 505
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 57/351 (16%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L VN++P T+T E L +FS GE+ESC+++ D + S G+GFV Y A+ AI +
Sbjct: 126 LFVNFLPNTITTETLHAMFSVFGEIESCRVMVDLVSGLSRGFGFVKYKDNASAQYAIQSM 185
Query: 89 NGLKLQNKSIKVSYAR-----------------------------PSSEAIKRAN-LYVS 118
N K++ K++ V YA P E K +N +++
Sbjct: 186 NAAKIEKKTLLVRYANSESQSSSSSSSSSSSSSLSQPITHQHHHLPDLEHHKPSNNIFIK 245
Query: 119 GLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ 178
GLP TQ+ L F YG ++ S++L D + S+G VRF++
Sbjct: 246 GLPTTFTQDQLNTFFSTYGIVLESKVLLDIATNA---------------SRGQALVRFSE 290
Query: 179 HIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFG 238
A A++ L+ G+ +P+ +K+A+S + L Q A + +
Sbjct: 291 VESATKAIKALDNYKFPGSDKPVIIKYADSEDDKI------LKRQKATSKRQPIRYSPYP 344
Query: 239 NP-----LHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFG 293
+P L+ A + ++ + L P S ++VYNL + +D +L++LF
Sbjct: 345 SPNATPSLYSPAAY-YSQMAMPSLPTIQSPILSTGSDPTNLYVYNLPTDADDALLYRLFS 403
Query: 294 PFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
P GA+ +VKVV+DP T C+GFGFV M N +++ AI S+NG + ++LQ
Sbjct: 404 PSGAIASVKVVKDPITQACRGFGFVRMVNLTDSLNAINSVNGSIVEGKILQ 454
>gi|312375028|gb|EFR22477.1| hypothetical protein AND_15210 [Anopheles darlingi]
Length = 295
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 121/194 (62%), Gaps = 20/194 (10%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD-KTTAQSLGYGFVNYYRTEDA 81
N +NLIVNY+PQ MT++E+ +FS++G +ESC+L+RD K T S G+GFVNY + A
Sbjct: 96 NHAGTNLIVNYLPQDMTEQEMYSIFSNMGPIESCRLMRDLKQTGYSYGFGFVNYLTEDAA 155
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+RAI LNG ++NK +KVSYARP S+ IK NLY++ LP+ + ++ L+ +F YGTI+
Sbjct: 156 QRAIKCLNGFPIRNKRLKVSYARPQSDDIKETNLYITNLPRTINEDQLDIIFGKYGTIVQ 215
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
IL DK+ +G P +G+ FV + + + LN IP+G ++P+
Sbjct: 216 KNILRDKL---------TGQP------RGVAFVSARKR---KKQYRPLNNVIPQGGTQPL 257
Query: 202 TVKFANSPAGRAKA 215
V+ A GRAKA
Sbjct: 258 IVRVAED-HGRAKA 270
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD-PQTYKCKGFGFVCMTN 322
P S + +G + V L + + ++ +F G +++ +++RD QT GFGFV
Sbjct: 92 PGSPNHAGTNLIVNYLPQDMTEQEMYSIFSNMGPIESCRLMRDLKQTGYSYGFGFVNYLT 151
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSF 347
D A AI+ LNG+ + ++ L+VS+
Sbjct: 152 EDAAQRAIKCLNGFPIRNKRLKVSY 176
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 119/184 (64%), Gaps = 15/184 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
+E +NLI+NY+PQ+MT EL +F + G + ++IRD+ + S GYGFV+Y +DA+
Sbjct: 26 DEDRTNLIINYLPQSMTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYENPKDAK 85
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI L+GL +QNK+IKVSYARP++E IK +NLY++ L +T+E + ++F YG I+T
Sbjct: 86 RAIETLSGLAIQNKTIKVSYARPNTELIKDSNLYIANLGCSVTEEAIHSMFSTYGKIVTL 145
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
+L D ++G P KG+ FVR+++ EA+ A+ LNGT+ G +P+
Sbjct: 146 NLLKDP---------ITGKP------KGVAFVRYSKQSEAKDAITALNGTMMTGNDKPML 190
Query: 203 VKFA 206
VK A
Sbjct: 191 VKVA 194
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ DN L+ +F G + +++RD ++ G+GFV N +A AI++L
Sbjct: 32 LIINYLPQSMTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYENPKDAKRAIETL 91
Query: 334 NGYALGDRLLQVSF 347
+G A+ ++ ++VS+
Sbjct: 92 SGLAIQNKTIKVSY 105
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ NL + + +F +G + + +++DP T K KG FV + EA AI +L
Sbjct: 118 LYIANLGCSVTEEAIHSMFSTYGKIVTLNLLKDPITGKPKGVAFVRYSKQSEAKDAITAL 177
Query: 334 NG 335
NG
Sbjct: 178 NG 179
>gi|194744937|ref|XP_001954949.1| GF18529 [Drosophila ananassae]
gi|190627986|gb|EDV43510.1| GF18529 [Drosophila ananassae]
Length = 417
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 107/181 (59%), Gaps = 15/181 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT+ EL +FS G + K+IRD +T S GYGFV++ + A+ A I
Sbjct: 142 TNLIINYLPQDMTEMELADIFSKFGHLRRHKIIRDLSTGFSFGYGFVDFMDSRQAQVAQI 201
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
L+G +L+ K +KVSYARP SE IK +NLYVS LP + + LF P+G I+ IL
Sbjct: 202 ILDGRQLRGKRLKVSYARPRSEDIKNSNLYVSHLPATTNESQIRELFGPHGQILDINILI 261
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
+K +G P KG+ FVRF AE A + L+G +P G S PI VKF
Sbjct: 262 NK---------ATGLP------KGVAFVRFCSRTSAEKAQKTLDGIVPRGGSRPIEVKFV 306
Query: 207 N 207
N
Sbjct: 307 N 307
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+NSNL V+++P T + +++ LF G++ ++ +K T G FV + AE+A
Sbjct: 226 KNSNLYVSHLPATTNESQIRELFGPHGQILDINILINKATGLPKGVAFVRFCSRTSAEKA 285
Query: 85 IIELNGL 91
L+G+
Sbjct: 286 QKTLDGI 292
>gi|67971522|dbj|BAE02103.1| unnamed protein product [Macaca fascicularis]
Length = 115
Score = 148 bits (374), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/105 (63%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
Query: 248 KFAPLTADLLNN-SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
+F+P+T D + + + + G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD
Sbjct: 7 RFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 66
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T KCKGFGFV MTNYDEA AI SLNGY LGDR+LQVSFKT+K
Sbjct: 67 FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 111
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L +F G V + K+IRD T + G+GFV ++A AI LNG +L ++ ++VS+
Sbjct: 48 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 107
>gi|195565544|ref|XP_002106359.1| Sex lethal [Drosophila simulans]
gi|194203735|gb|EDX17311.1| Sex lethal [Drosophila simulans]
Length = 301
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 108/171 (63%), Gaps = 16/171 (9%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+NLIVNY+PQ MT EL LF ++G + +C+++RD T S GY FV++
Sbjct: 110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEM 169
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
D++RAI LNG+ ++NK +KVSYARP E+IK NLYV+ LP+ +T + L+ +F YG+I
Sbjct: 170 DSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ-HIEAEHAMQEL 189
+ IL DK+ +G P +G+ FVRF++ +I AM++L
Sbjct: 230 VQKNILRDKL---------TGRP------RGVAFVRFSESNILFYGAMEKL 265
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L + D L+ LF G + +++RD +T G+ FV T+ ++ AI+ L
Sbjct: 119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 178
Query: 334 NGYALGDRLLQVSF 347
NG + ++ L+VS+
Sbjct: 179 NGITVRNKRLKVSY 192
>gi|313230477|emb|CBY18692.1| unnamed protein product [Oikopleura dioica]
Length = 227
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 108/181 (59%), Gaps = 16/181 (8%)
Query: 17 TYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYY 76
T D N++ +NLIVNY+PQ+ T +E +LFS+VG V ++IR + T S GYGF++
Sbjct: 61 TSDVDFNKEKTNLIVNYLPQSFTDQEFFNLFSTVGRVNKARIIRHRQTGYSFGYGFIDMA 120
Query: 77 RTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPY 136
+DAERAI +LN ++ +K +KV+Y+ PS + + NLY+ GLPKH T+ +LE+ F +
Sbjct: 121 SADDAERAIRKLNQYQIGHKRLKVAYSLPSGDRTRNINLYIKGLPKHWTRRELEDHFTRF 180
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-TIPE 195
G I +RIL D Q G+GF+ + + AE A +E+NG T+P+
Sbjct: 181 GAIRNARILFDPAT---------------QTGSGVGFLLYAEKAMAERACEEMNGQTLPD 225
Query: 196 G 196
Sbjct: 226 A 226
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ D + LF G V +++R QT G+GF+ M + D+A AI+ L
Sbjct: 73 LIVNYLPQSFTDQEFFNLFSTVGRVNKARIIRHRQTGYSFGYGFIDMASADDAERAIRKL 132
Query: 334 NGYALGDRLLQVSF 347
N Y +G + L+V++
Sbjct: 133 NQYQIGHKRLKVAY 146
>gi|313246014|emb|CBY34981.1| unnamed protein product [Oikopleura dioica]
Length = 225
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 17 TYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYY 76
T D N++ +NLIVNY+PQ+ T +E +LFS+VG V ++IR + T S GYGF++
Sbjct: 61 TSDVDFNKEKTNLIVNYLPQSFTDQEFFNLFSTVGRVNKARIIRHRQTGYSFGYGFIDMA 120
Query: 77 RTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPY 136
+DAERAI +LN ++ +K +KV+Y+ PS + + NLY+ GLPKH T+ +LE+ F +
Sbjct: 121 SADDAERAIRKLNQYQIGHKRLKVAYSLPSGDRTRNINLYIKGLPKHWTRRELEDHFTRF 180
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-TIPE 195
G I +RIL D Q G+GF+ + + AE A +E+NG T+P+
Sbjct: 181 GAIRNARILFDPAT---------------QTGTGVGFLLYAEKAMAERACEEMNGQTLPD 225
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P++ D + LF G V +++R QT G+GF+ M + D+A AI+ L
Sbjct: 73 LIVNYLPQSFTDQEFFNLFSTVGRVNKARIIRHRQTGYSFGYGFIDMASADDAERAIRKL 132
Query: 334 NGYALGDRLLQVSF 347
N Y +G + L+V++
Sbjct: 133 NQYQIGHKRLKVAY 146
>gi|297278198|ref|XP_001116262.2| PREDICTED: ELAV-like protein 3-like, partial [Macaca mulatta]
Length = 109
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 69/80 (86%)
Query: 272 WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
WCIFVYNL+PE +++VLWQLFGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI
Sbjct: 26 WCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA 85
Query: 332 SLNGYALGDRLLQVSFKTHK 351
SLNGY LG+R+LQVSFKT K
Sbjct: 86 SLNGYRLGERVLQVSFKTSK 105
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
+ N P+ + L LF G V + K+IRD TT + G+GFV ++A AI L
Sbjct: 29 FVYNLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 87
Query: 89 NGLKLQNKSIKVSY 102
NG +L + ++VS+
Sbjct: 88 NGYRLGERVLQVSF 101
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 15/192 (7%)
Query: 16 STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
STY + +NLIVNY+P + L+ LF G+VES ++IR+K + +SLGYGFV Y
Sbjct: 105 STYSGEGATDRTNLIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKY 164
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRP 135
+ A+ AI+ NG ++ K IKVS ARP+SE K LYV+ LP H T+ ++ LF P
Sbjct: 165 KDPQSADSAILTRNGHQVYGKRIKVSVARPASEEHKHTKLYVANLPHHFTKAEVIQLFAP 224
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
+G II R+L + N F +GI FV++N EA A++ L+ T E
Sbjct: 225 HGRIIECRLLMEA----NSGRF-----------RGIAFVQYNTRQEAAAAIRSLHDTPME 269
Query: 196 GASEPITVKFAN 207
G P+ VK A+
Sbjct: 270 GVPRPLIVKLAD 281
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ V L E +D L +LF FG V++ +V+R+ + + G+GFV + A AI +
Sbjct: 118 LIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKYKDPQSADSAILTR 177
Query: 334 NGYALGDRLLQVS 346
NG+ + + ++VS
Sbjct: 178 NGHQVYGKRIKVS 190
>gi|295871070|gb|ADG49460.1| CG4396 [Drosophila simulans]
gi|295871072|gb|ADG49461.1| CG4396 [Drosophila simulans]
gi|295871074|gb|ADG49462.1| CG4396 [Drosophila simulans]
gi|295871076|gb|ADG49463.1| CG4396 [Drosophila simulans]
gi|295871078|gb|ADG49464.1| CG4396 [Drosophila simulans]
gi|295871080|gb|ADG49465.1| CG4396 [Drosophila simulans]
gi|295871082|gb|ADG49466.1| CG4396 [Drosophila simulans]
gi|295871084|gb|ADG49467.1| CG4396 [Drosophila simulans]
gi|295871086|gb|ADG49468.1| CG4396 [Drosophila simulans]
gi|295871088|gb|ADG49469.1| CG4396 [Drosophila simulans]
gi|295871090|gb|ADG49470.1| CG4396 [Drosophila simulans]
gi|295871092|gb|ADG49471.1| CG4396 [Drosophila simulans]
gi|295871094|gb|ADG49472.1| CG4396 [Drosophila simulans]
gi|295871096|gb|ADG49473.1| CG4396 [Drosophila simulans]
gi|295871098|gb|ADG49474.1| CG4396 [Drosophila simulans]
gi|295871100|gb|ADG49475.1| CG4396 [Drosophila simulans]
gi|295871102|gb|ADG49476.1| CG4396 [Drosophila simulans]
gi|295871104|gb|ADG49477.1| CG4396 [Drosophila simulans]
gi|295871106|gb|ADG49478.1| CG4396 [Drosophila simulans]
gi|295871108|gb|ADG49479.1| CG4396 [Drosophila simulans]
gi|295871110|gb|ADG49480.1| CG4396 [Drosophila simulans]
gi|295871112|gb|ADG49481.1| CG4396 [Drosophila simulans]
gi|295871114|gb|ADG49482.1| CG4396 [Drosophila simulans]
gi|295871116|gb|ADG49483.1| CG4396 [Drosophila simulans]
gi|295871118|gb|ADG49484.1| CG4396 [Drosophila melanogaster]
gi|295871120|gb|ADG49485.1| CG4396 [Drosophila melanogaster]
gi|295871122|gb|ADG49486.1| CG4396 [Drosophila melanogaster]
gi|295871124|gb|ADG49487.1| CG4396 [Drosophila melanogaster]
gi|295871126|gb|ADG49488.1| CG4396 [Drosophila melanogaster]
gi|295871128|gb|ADG49489.1| CG4396 [Drosophila melanogaster]
gi|295871130|gb|ADG49490.1| CG4396 [Drosophila melanogaster]
gi|295871132|gb|ADG49491.1| CG4396 [Drosophila melanogaster]
gi|295871134|gb|ADG49492.1| CG4396 [Drosophila melanogaster]
gi|295871136|gb|ADG49493.1| CG4396 [Drosophila melanogaster]
gi|295871138|gb|ADG49494.1| CG4396 [Drosophila melanogaster]
gi|295871140|gb|ADG49495.1| CG4396 [Drosophila melanogaster]
gi|295871142|gb|ADG49496.1| CG4396 [Drosophila melanogaster]
gi|295871144|gb|ADG49497.1| CG4396 [Drosophila melanogaster]
gi|295871146|gb|ADG49498.1| CG4396 [Drosophila melanogaster]
gi|295871148|gb|ADG49499.1| CG4396 [Drosophila melanogaster]
gi|295871150|gb|ADG49500.1| CG4396 [Drosophila melanogaster]
gi|295871152|gb|ADG49501.1| CG4396 [Drosophila melanogaster]
gi|295871154|gb|ADG49502.1| CG4396 [Drosophila melanogaster]
gi|295871156|gb|ADG49503.1| CG4396 [Drosophila melanogaster]
gi|295871158|gb|ADG49504.1| CG4396 [Drosophila melanogaster]
gi|295871160|gb|ADG49505.1| CG4396 [Drosophila melanogaster]
gi|295871162|gb|ADG49506.1| CG4396 [Drosophila melanogaster]
Length = 123
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 93/137 (67%), Gaps = 21/137 (15%)
Query: 104 RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPE 163
RPSSE+IK ANLYVSGLPK+++Q DLE +F +G IITSRILCD +SG
Sbjct: 1 RPSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDN---------ISG--- 48
Query: 164 IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA-----LAA 218
+SKG+GF+RF+Q EAE A+QELNG P+G +EPITVKFAN+P+ AKA L A
Sbjct: 49 ---LSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTA 105
Query: 219 NLNAQ-AAAMRHFAAAM 234
L Q AAA R A A+
Sbjct: 106 YLTPQAAAATRRLAGAL 122
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 45/66 (68%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL V+ +P+ ++Q +L+ +F+S G++ + +++ D + S G GF+ + + +AERA
Sbjct: 8 KGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERA 67
Query: 85 IIELNG 90
I ELNG
Sbjct: 68 IQELNG 73
>gi|410129791|dbj|BAM64857.1| RNA binding protein Elav, partial [Lamellibrachia satsuma]
Length = 153
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 20/148 (13%)
Query: 108 EAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI 167
E+IK ANLY+SGLPK++TQ+D+EN+ P G IITSRI+ D R I
Sbjct: 1 ESIKGANLYISGLPKNITQQDIENMCAPCGNIITSRIVSDSQTGTETR-----------I 49
Query: 168 SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAM 227
SKG+GF+RF+Q EAE A+++LNGTIPEGA+EPITVKFANSP+ L AM
Sbjct: 50 SKGVGFIRFDQRHEAERAIKQLNGTIPEGATEPITVKFANSPSSNKNFLPIQ------AM 103
Query: 228 RHFAAAMRHFGNPLHH--SARF-KFAPL 252
+ R F P+HH + RF +F+PL
Sbjct: 104 AQYLTPTRRFLGPIHHHPAGRFSRFSPL 131
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ----SLGYGFVNYYRTED 80
+ +NL ++ +P+ +TQ++++++ + G + + +++ D T S G GF+ + + +
Sbjct: 4 KGANLYISGLPKNITQQDIENMCAPCGNIITSRIVSDSQTGTETRISKGVGFIRFDQRHE 63
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
AERAI +LNG + + ++ +S + + L + + +++T
Sbjct: 64 AERAIKQLNGTIPEGATEPITVKFANSPSSNKNFLPIQAMAQYLT 108
>gi|399152197|emb|CCI89169.1| elav protein, partial [Sepia officinalis]
Length = 229
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 88/148 (59%), Gaps = 34/148 (22%)
Query: 32 NYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA-------------------------- 65
NY+PQTMTQEE++ LF+S+GEVESCKLIRDK TA
Sbjct: 1 NYLPQTMTQEEIRSLFASIGEVESCKLIRDKPTAMNTLRQNDIDQGLPETAMNTMRQNDI 60
Query: 66 --------QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYV 117
QSLGYGFVNY DAE+AI LNGL+LQNK+IKVSYA PSSE+IK ANL +
Sbjct: 61 DQGTLESGQSLGYGFVNYKYPSDAEKAINTLNGLRLQNKTIKVSYAPPSSESIKGANLNI 120
Query: 118 SGLPKHMTQEDLENLFRPYGTIITSRIL 145
G K TQ +L P G + SRIL
Sbjct: 121 GGFAKSFTQLELGKFVFPVGILKHSRIL 148
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 26/151 (17%)
Query: 120 LPKHMTQEDLENLFRPYGTIITSRILCDKMASENV---RSFVSGTPE----------IPQ 166
LP+ MTQE++ +LF G + + +++ DK + N G PE I Q
Sbjct: 3 LPQTMTQEEIRSLFASIGEVESCKLIRDKPTAMNTLRQNDIDQGLPETAMNTMRQNDIDQ 62
Query: 167 ------ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
S G GFV + +AE A+ LNG + T+K + +P ANL
Sbjct: 63 GTLESGQSLGYGFVNYKYPSDAEKAINTLNGLRLQNK----TIKVSYAPPSSESIKGANL 118
Query: 221 NAQAAAMRHFAAAMRHFGNP---LHHSARFK 248
N A + F P L HS K
Sbjct: 119 NIGGFAKSFTQLELGKFVFPVGILKHSRILK 149
>gi|195564591|ref|XP_002105898.1| GD16553 [Drosophila simulans]
gi|194203263|gb|EDX16839.1| GD16553 [Drosophila simulans]
Length = 226
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 93/149 (62%), Gaps = 15/149 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT EL +LFS G + +CK++RD T S GYGFV+Y D+E AI
Sbjct: 93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 152
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+LNG ++NK +KVSYARP ++IK NLYV L +++ + L+ +F PYG I+ IL
Sbjct: 153 KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILR 212
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVR 175
DK+ +G P +G+ FVR
Sbjct: 213 DKL---------TGRP------RGVAFVR 226
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL 338
L + D L+ LF G + K++RD +T G+GFV ++ AIQ LNG+ +
Sbjct: 100 LPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYV 159
Query: 339 GDRLLQVSF 347
++ L+VS+
Sbjct: 160 RNKRLKVSY 168
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NL ++ LP+ MT +L NLF G I T +I+ R F +G S G G
Sbjct: 93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIM---------RDFKTG------YSFGYG 137
Query: 173 FVRFNQHIEAEHAMQELNG 191
FV + ++E A+Q+LNG
Sbjct: 138 FVDYKTESDSEDAIQKLNG 156
>gi|145344842|ref|XP_001416933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577159|gb|ABO95226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 153/333 (45%), Gaps = 49/333 (14%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
MY+ Q + +T S + +++NL V + + + + L+ LF + GEV+SC +IRD +T +
Sbjct: 1 MYSDGQGYAATTPSS-SRKHANLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNK 59
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---------AIKRANLYV 117
S G+GFV + T AE AI NG + K ++V +A E A N+YV
Sbjct: 60 SRGFGFVKFVSTARAEDAIERFNGKEYAGKMLEVKFANTDGESDGAGGAANAPPSDNVYV 119
Query: 118 SGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFN 177
GLP T +DL+ F +G I+ R+L RS SG +RF
Sbjct: 120 KGLPPSWTHDDLKAFFTHFGHIVECRLL------HANRSTSSGA-----------LIRFL 162
Query: 178 QHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHF 237
+ EA A+ NG + P+ V++A AQ +H AA+
Sbjct: 163 RESEATAAVTRANGRLLVPNGPPLVVRYA--------------EAQGKNNKHDFAALAVL 208
Query: 238 GNPLHHSARFKF-APLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFG 296
G+ H KF AP+ + + S+ G + + NL P ++ L++ F PFG
Sbjct: 209 GSSPSH----KFDAPMQS---HQKFASATSMAQGGATMCIQNLPPAADELFLYKTFAPFG 261
Query: 297 AVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
A+ +V++VRD T C G + +Y +A A
Sbjct: 262 AINSVQIVRDDWTGLCSGVAVINFRSYSDACDA 294
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V N++ ++ L +LF G VQ+ V+RD T K +GFGFV + A AI+
Sbjct: 22 LYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNKSRGFGFVKFVSTARAEDAIERF 81
Query: 334 NGYALGDRLLQVSF 347
NG ++L+V F
Sbjct: 82 NGKEYAGKMLEVKF 95
>gi|253722793|pdb|1D8Z|A Chain A, Solution Structure Of The First Rna-Binding Domain (Rbd1)
Of Hu Antigen C (Huc)
Length = 89
Score = 127 bits (319), Expect = 8e-27, Method: Composition-based stats.
Identities = 58/88 (65%), Positives = 72/88 (81%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQ+E + LF S+G++ESCKL+RDK T QSLGYGFVNY DA++
Sbjct: 2 DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 61
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIK 111
AI LNGLKLQ K+IKVSYARPSS +I+
Sbjct: 62 AINTLNGLKLQTKTIKVSYARPSSASIR 89
Score = 44.3 bits (103), Expect = 0.086, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
LFG G +++ K+VRD T + G+GFV ++ ++A AI +LNG L + ++VS+
Sbjct: 24 LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 80
Score = 41.2 bits (95), Expect = 0.69, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQ++ ++LF G I + +++ DK+ + S G
Sbjct: 4 KTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ---------------SLGY 48
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV ++ +A+ A+ LNG
Sbjct: 49 GFVNYSDPNDADKAINTLNG 68
>gi|402583998|gb|EJW77940.1| hypothetical protein WUBG_11148, partial [Wuchereria bancrofti]
Length = 102
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK---VVRDPQTYKCKGFGFVC 319
P S+ G+GWCIFVYNL PETED VLWQLFGPFGAV +VK +++D T KCKG+GFV
Sbjct: 3 PCGSVVGTGWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKAGIIIKDFSTGKCKGYGFVT 62
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
M Y++AV AI SLNG LG+R LQVSFK+
Sbjct: 63 MGQYEDAVTAITSLNGTQLGNRTLQVSFKSQ 93
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCK---LIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ N P+T L LF G V S K +I+D +T + GYGFV + EDA AI
Sbjct: 15 FVYNLPPET-EDAVLWQLFGPFGAVLSVKAGIIIKDFSTGKCKGYGFVTMGQYEDAVTAI 73
Query: 86 IELNGLKLQNKSIKVSY 102
LNG +L N++++VS+
Sbjct: 74 TSLNGTQLGNRTLQVSF 90
>gi|257215878|emb|CAX83091.1| ELAV-like protein 1 (Hu-antigen R) [Schistosoma japonicum]
Length = 301
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ NLI+NY+P ++T +L +LFSSVG +++C++IRD+ + S G+GF Y + A +AI
Sbjct: 6 DRNLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAI 65
Query: 86 IELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
NG ++ +K +KVS A+ + +NLYV P +T++DL F +G +I RIL
Sbjct: 66 TRFNGYRIADKVLKVSLAKLQGRLCQSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRIL 125
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE--PITV 203
D + +SKG +V F ++AE A + L+ I G+S+ +++
Sbjct: 126 RDHDTN---------------VSKGSAYVLFENSVDAEAAKRSLDAHIWPGSSDNQTLSI 170
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGN 239
KF P + +AN R +H GN
Sbjct: 171 KFTTPPYRQ----SANSTKSKNNFRRPFVQQQHLGN 202
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q+SNL V P T+T+++L F G V C+++RD T S G +V + + DAE A
Sbjct: 91 QSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRDHDTNVSKGSAYVLFENSVDAEAA 150
Query: 85 IIELNGL----KLQNKSIKVSYARP 105
L+ N+++ + + P
Sbjct: 151 KRSLDAHIWPGSSDNQTLSIKFTTP 175
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P + D L LF G ++ +++RD + GFGF + A AI
Sbjct: 9 LIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAITRF 68
Query: 334 NGYALGDRLLQVSF 347
NGY + D++L+VS
Sbjct: 69 NGYRIADKVLKVSL 82
>gi|292659621|pdb|3HI9|A Chain A, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
gi|292659622|pdb|3HI9|B Chain B, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
gi|292659623|pdb|3HI9|C Chain C, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
gi|292659624|pdb|3HI9|D Chain D, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
Length = 84
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLIVNY+PQ MTQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERAI
Sbjct: 5 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 64
Query: 87 ELNGLKLQNKSIKVSYARPS 106
LNGL+LQ+K+IKVSYARPS
Sbjct: 65 TLNGLRLQSKTIKVSYARPS 84
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
R NL V+ LP++MTQ++L +LF G + +++++ DK+A S G
Sbjct: 4 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SLGY 48
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
GFV + +AE A+ LNG + S+ I V +A
Sbjct: 49 GFVNYVTAKDAERAINTLNGLRLQ--SKTIKVSYA 81
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 269 GSGWCIFVYNLAPE--TEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEA 326
G G + N P+ T+D L LF G V++ K++RD G+GFV +A
Sbjct: 1 GPGRTNLIVNYLPQNMTQDE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 59
Query: 327 VFAIQSLNGYALGDRLLQVSF 347
AI +LNG L + ++VS+
Sbjct: 60 ERAINTLNGLRLQSKTIKVSY 80
>gi|257215880|emb|CAX83092.1| ELAV-like protein 1 (Hu-antigen R) [Schistosoma japonicum]
Length = 301
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ NLI+NY+P ++T +L +LFSSVG +++C++IRD+ + S G+GF Y + A +AI
Sbjct: 6 DRNLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAI 65
Query: 86 IELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
NG ++ +K +KVS A+ + +NLYV P +T++DL F +G +I RIL
Sbjct: 66 TRFNGYRIADKVLKVSLAKLQGRLCQSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRIL 125
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE--PITV 203
D + +SKG ++ F ++AE A + L+ I G+S+ +++
Sbjct: 126 RDHDTN---------------VSKGSAYILFENSVDAEAAKRSLDAHIWPGSSDNQTLSI 170
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGN 239
KF P + +AN R +H GN
Sbjct: 171 KFTTPPYQQ----SANSTKSKNNFRRPFVQQQHLGN 202
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q+SNL V P T+T+++L F G V C+++RD T S G ++ + + DAE A
Sbjct: 91 QSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRDHDTNVSKGSAYILFENSVDAEAA 150
Query: 85 IIELNGL----KLQNKSIKVSYARP 105
L+ N+++ + + P
Sbjct: 151 KRSLDAHIWPGSSDNQTLSIKFTTP 175
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P + D L LF G ++ +++RD + GFGF + A AI
Sbjct: 9 LIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAITRF 68
Query: 334 NGYALGDRLLQVSF 347
NGY + D++L+VS
Sbjct: 69 NGYRIADKVLKVSL 82
>gi|76154205|gb|AAX25698.2| SJCHGC08696 protein [Schistosoma japonicum]
Length = 242
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 17/187 (9%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ NLI+NY+P ++T +L +LFSSVG +++C++IRD+ + S G+GF Y + A +A
Sbjct: 5 HDRNLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKA 64
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
I NG ++ +K +KVS A+ + +NLYV P +T++DL F +G +I RI
Sbjct: 65 ITRFNGYRIADKVLKVSLAKLQGRLCQSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRI 124
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE--PIT 202
L D + +SKG +V F ++AE A + L+ I G+S+ ++
Sbjct: 125 LRDHDTN---------------VSKGSAYVLFENSVDAEAAKRSLDAHIWPGSSDNQTLS 169
Query: 203 VKFANSP 209
+KF P
Sbjct: 170 IKFTTPP 176
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q+SNL V P T+T+++L F G V C+++RD T S G +V + + DAE A
Sbjct: 91 QSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRDHDTNVSKGSAYVLFENSVDAEAA 150
Query: 85 IIELNGL----KLQNKSIKVSYARP----SSEAIKRAN 114
L+ N+++ + + P S+++ K N
Sbjct: 151 KRSLDAHIWPGSSDNQTLSIKFTTPPYRQSADSTKSKN 188
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 275 FVYNLAPET-EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+ N P + D L LF G ++ +++RD + GFGF + A AI
Sbjct: 9 LIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAITRF 68
Query: 334 NGYALGDRLLQVSF 347
NGY + D++L+VS
Sbjct: 69 NGYRIADKVLKVSL 82
>gi|302844953|ref|XP_002954016.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
gi|300260828|gb|EFJ45045.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
Length = 620
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 166/385 (43%), Gaps = 81/385 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED---AE 82
NS+L V + + +T+ +L LFSSVG V S ++ RD T +SLGY +VNY D AE
Sbjct: 20 NSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAAE 79
Query: 83 RAIIELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
RA+ LN L K +++ S+ PS+ N+++ L K + + L + F +G I+
Sbjct: 80 RAMETLNYHVLNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKSIDAKALHDTFSAFGKIL 139
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ D +SKG GFV F A+ A+Q +N EG
Sbjct: 140 SCKVATDANG----------------VSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVY 183
Query: 201 IT--VKFANSPAGR-------AKALAANLN--------------AQAAAMRHFAAAMRHF 237
+ K A+ P G+ K L A L A M+ + + F
Sbjct: 184 VGPFQKRADRPQGKDVYTNVFVKNLPAELGDDELSKMATEFGEVTSAVVMKDEKGSSKGF 243
Query: 238 GNPLHHSARFKFAPLTA---DLLNNSMLPPKSLHGS------------------------ 270
G FK A A + LN+ + K L+
Sbjct: 244 G-----FINFKDAECAAKCVEALNDKEIGGKVLYAGRAQKKTEREAMLRQKVEESKQERY 298
Query: 271 ----GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEA 326
G ++V NLA E +D+ L LF G + + KV++D + K KGFGFVC T++DEA
Sbjct: 299 LKYQGMNLYVKNLADEVDDDALRDLFTSCGTITSCKVMKD-TSGKSKGFGFVCFTSHDEA 357
Query: 327 VFAIQSLNGYALGDRLLQVSFKTHK 351
A+ +NG + + L V+ K
Sbjct: 358 TRAVTEMNGKMVKGKPLYVALAQRK 382
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + +EL + + GEV S +++D+ S G+GF+N+ E A + +
Sbjct: 201 TNVFVKNLPAELGDDELSKMATEFGEVTSAVVMKDEK-GSSKGFGFINFKDAECAAKCVE 259
Query: 87 ELNGLKLQNKSIKVSYARPSSE--AIKR----------------ANLYVSGLPKHMTQED 128
LN ++ K + A+ +E A+ R NLYV L + +
Sbjct: 260 ALNDKEIGGKVLYAGRAQKKTEREAMLRQKVEESKQERYLKYQGMNLYVKNLADEVDDDA 319
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L +LF GTI + +++ D SG SKG GFV F H EA A+ E
Sbjct: 320 LRDLFTSCGTITSCKVMKD----------TSGK------SKGFGFVCFTSHDEATRAVTE 363
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANL 220
+NG + +G +P+ V A R L AN+
Sbjct: 364 MNGKMVKG--KPLYVALAQRKDVRRAQLEANV 393
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + + L+ LF+S G + SCK+++D T+ +S G+GFV + ++A RA
Sbjct: 302 QGMNLYVKNLADEVDDDALRDLFTSCGTITSCKVMKD-TSGKSKGFGFVCFTSHDEATRA 360
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG ++ K + V+ A+ + ++RA L
Sbjct: 361 VTEMNGKMVKGKPLYVALAQ--RKDVRRAQL 389
>gi|195501252|ref|XP_002097723.1| GE24318 [Drosophila yakuba]
gi|194183824|gb|EDW97435.1| GE24318 [Drosophila yakuba]
Length = 256
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 6 EMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
EM+ T + + +NLI+NY+PQ MT+ E+ LFS GE+ K+IR + T
Sbjct: 19 EMFQTGSPVPPLINNAYSRGQTNLILNYLPQDMTELEVHRLFSKFGEIRKAKIIRHRRTG 78
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMT 125
S YGFV+Y A A ++G + + K +KV++ARPS + + NLYV+ LP +M
Sbjct: 79 ISCCYGFVDYVSPRQAAAAQESMDGYETRGKRLKVAFARPSEDPPRNNNLYVANLPTYMD 138
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
++ + LF YG ++ +L K + ++S+G+ FV F +AE A
Sbjct: 139 EKKVRELFATYGNVLDINLLRHKFS---------------KMSRGVAFVHFEHCRDAEMA 183
Query: 186 MQELNGTIPEGASEPITVKFANSP 209
++ + EGA P+TVKF + P
Sbjct: 184 KFGMDRYMIEGAFRPLTVKFVDRP 207
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 260 SMLPP--KSLHGSGWCIFVYNLAPETEDNV-LWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
S +PP + + G + N P+ + + +LF FG ++ K++R +T +G
Sbjct: 25 SPVPPLINNAYSRGQTNLILNYLPQDMTELEVHRLFSKFGEIRKAKIIRHRRTGISCCYG 84
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPLPP 355
FV + +A A +S++GY + L+V+F PP
Sbjct: 85 FVDYVSPRQAAAAQESMDGYETRGKRLKVAFARPSEDPP 123
>gi|194901064|ref|XP_001980072.1| GG16933 [Drosophila erecta]
gi|190651775|gb|EDV49030.1| GG16933 [Drosophila erecta]
Length = 255
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLI+NY+PQ MT+ E++ LFS GE+ K+IR + T S YGFV+Y A
Sbjct: 36 SQDQTNLILNYLPQDMTESEVRRLFSKFGEIRKAKIIRHRLTGISCCYGFVDYVSARQAA 95
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
A ++G + + K +KV++ARPS + + +NLYV+ LP H+ + + LF YG ++
Sbjct: 96 AAQSSMDGYETRGKRLKVAFARPSEDQSRNSNLYVANLPTHLDERKVRELFAVYGIVLDV 155
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
+L K + S+G+ FV F +AE A ++ + EGA P+
Sbjct: 156 NLLRHKFN---------------RTSRGVAFVHFKHWRDAEMAKYGMDRHMIEGAFRPLA 200
Query: 203 VKFANSP 209
VKF + P
Sbjct: 201 VKFVDRP 207
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S+ +NSNL V +P + + +++ LF+ G V L+R K S G FV++
Sbjct: 119 SEDQSRNSNLYVANLPTHLDERKVRELFAVYGIVLDVNLLRHKFNRTSRGVAFVHFKHWR 178
Query: 80 DAERA 84
DAE A
Sbjct: 179 DAEMA 183
>gi|195395310|ref|XP_002056279.1| GJ10859 [Drosophila virilis]
gi|194142988|gb|EDW59391.1| GJ10859 [Drosophila virilis]
Length = 388
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
+K E + + S+ D + +NL+VNY+P M + EL LF S G ++ K+IRD
Sbjct: 4 IKDEVFADYMATASSSPAEDQTGETTNLLVNYLPFDMLEGELYALFVSFGHIKHVKIIRD 63
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLP 121
T S YGFVN+ +A A + LNG +++ K +KVS ARPSS I+ A +YV+ LP
Sbjct: 64 AETGASHCYGFVNFSAAGNANLAQVCLNGRQVRGKRLKVSPARPSSMDIRNAKVYVANLP 123
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIE 181
++ + F YG I+ +L D+ +S+GI FVRF+
Sbjct: 124 IDYNEQKVRATFGRYGNILDLNVLKDRFTG---------------LSRGIAFVRFDLKSS 168
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSP 209
A+ A+ +NG EG S P+ V+ A P
Sbjct: 169 ADMAISVMNGYTLEGGSFPLQVRLAKRP 196
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS 346
L+ LF FG +++VK++RD +T +GFV + A A LNG + + L+VS
Sbjct: 45 LYALFVSFGHIKHVKIIRDAETGASHCYGFVNFSAAGNANLAQVCLNGRQVRGKRLKVS 103
>gi|407943922|pdb|4FXV|A Chain A, Crystal Structure Of An Elav-Like Protein 1 (Elavl1) From
Homo Sapiens At 1.90 A Resolution
gi|407943923|pdb|4FXV|B Chain B, Crystal Structure Of An Elav-Like Protein 1 (Elavl1) From
Homo Sapiens At 1.90 A Resolution
gi|407943924|pdb|4FXV|C Chain C, Crystal Structure Of An Elav-Like Protein 1 (Elavl1) From
Homo Sapiens At 1.90 A Resolution
gi|407943925|pdb|4FXV|D Chain D, Crystal Structure Of An Elav-Like Protein 1 (Elavl1) From
Homo Sapiens At 1.90 A Resolution
Length = 99
Score = 122 bits (306), Expect = 3e-25, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 68/82 (82%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q +NLIVNY+PQ TQ+EL+ LFSS+GEVES KLIRDK SLGYGFVNY +DAERA
Sbjct: 18 QGTNLIVNYLPQNXTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77
Query: 85 IIELNGLKLQNKSIKVSYARPS 106
I LNGL+LQ+K+IKVSYARPS
Sbjct: 78 INTLNGLRLQSKTIKVSYARPS 99
Score = 40.8 bits (94), Expect = 0.98, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
NL V+ LP++ TQ++L +LF G + +++++ DK+A S G GF
Sbjct: 21 NLIVNYLPQNXTQDELRSLFSSIGEVESAKLIRDKVAGH---------------SLGYGF 65
Query: 174 VRFNQHIEAEHAMQELNG 191
V + +AE A+ LNG
Sbjct: 66 VNYVTAKDAERAINTLNG 83
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++L+ G + V L + L LF G V++ K++RD G+GFV
Sbjct: 13 ENLYFQGTNLIVNYLPQNXTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAK 72
Query: 325 EAVFAIQSLNGYALGDRLLQVSF 347
+A AI +LNG L + ++VS+
Sbjct: 73 DAERAINTLNGLRLQSKTIKVSY 95
>gi|449811584|gb|AGF25287.1| ELAVL2 protein, partial [Sus scrofa]
Length = 69
Score = 122 bits (305), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/69 (75%), Positives = 59/69 (85%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
CIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNYDEA AI S
Sbjct: 1 CIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIAS 60
Query: 333 LNGYALGDR 341
LNGY LGDR
Sbjct: 61 LNGYRLGDR 69
Score = 40.8 bits (94), Expect = 0.98, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNK 96
L +F G V + K+IRD T + G+GFV ++A AI LNG +L ++
Sbjct: 16 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDR 69
>gi|349963011|dbj|GAA41029.1| ELAV-like protein 2 [Clonorchis sinensis]
Length = 518
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ NLI+NY+P+ +T +L +LF SVG V++C++IRD++ S G+GF Y E A RA
Sbjct: 5 HDRNLIINYIPRHLTDSDLANLFGSVGAVKTCRIIRDRSNGASFGFGFCEYEDAESAFRA 64
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
I NG ++ +K +KVS A+ +NLYV LP +T + L F +G +I R+
Sbjct: 65 IERFNGYRIADKVLKVSLAKLQGRLYHSSNLYVKNLPASITDDHLLTEFARFGKVIQCRV 124
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP--IT 202
L ++ + SKG +V F + AE A + L+GT G S+ +T
Sbjct: 125 LRERES---------------DASKGSAYVLFEKRCSAEAAKKSLDGTPWPGMSDDQILT 169
Query: 203 VKFANSPAGRAKALAANLN 221
+KFA P + +L + N
Sbjct: 170 IKFAPPPYRHSISLTSTKN 188
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++VYN+ +N L +LF FG + V + RDP+T + FGFV N+ A A+ +
Sbjct: 374 VYVYNIGNFMSENRLCELFSRFGVILGVSIPRDPKTNFARNFGFVSFNNFQSAQSAVNVM 433
Query: 334 NGYALGDRLLQVSFKTHK 351
NG R LQVSF+ K
Sbjct: 434 NGATCDGRRLQVSFRKPK 451
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
D+ L LFG GAV+ +++RD GFGF + + A AI+ NGY + D++L+
Sbjct: 20 DSDLANLFGSVGAVKTCRIIRDRSNGASFGFGFCEYEDAESAFRAIERFNGYRIADKVLK 79
Query: 345 VSF 347
VS
Sbjct: 80 VSL 82
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 6 EMYNTTQSHRSTYQSDVNEQNSNLIVNY-VPQTMTQEELQHLFSSVGEVESCKLIRDKTT 64
++ ++ QS + ++ ++ NSN + Y + M++ L LFS G + + RD T
Sbjct: 350 DIPSSEQSLKKAKENKTDKANSNSVYVYNIGNFMSENRLCELFSRFGVILGVSIPRDPKT 409
Query: 65 AQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHM 124
+ +GFV++ + A+ A+ +NG + ++VS+ +P + N + K
Sbjct: 410 NFARNFGFVSFNNFQSAQSAVNVMNGATCDGRRLQVSFRKPKQGTSRVCNNPNTLTHKPT 469
Query: 125 TQEDLEN 131
TQE L++
Sbjct: 470 TQEKLDD 476
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 163/374 (43%), Gaps = 62/374 (16%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+S+L V + ++++ L +F+ VG V + ++ RD T +SL Y +VNYY DAERA+
Sbjct: 9 SSSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERAL 68
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ K ++ +++ PS N+++ L K + + L + F +G I++ +
Sbjct: 69 DTLNNTPIRGKPCRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCK 128
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA------ 197
++ D S SKG GFV + A+ A+ ++NG + G
Sbjct: 129 VVTDDNNS----------------SKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGP 172
Query: 198 -------SEPITVKFAN-------------------SPAGRAKALAANLNAQAAAMRHFA 231
+P +KF N +P G +A L+ + + FA
Sbjct: 173 FKSSKERGQPTEIKFTNVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFA 232
Query: 232 AAMRHFGNP------LHHSARFKFAPLTADLLNNSMLPPKSLHGS------GWCIFVYNL 279
A + + + F PL A + L + G +++ N+
Sbjct: 233 FANFESADAAKNVVEIENGKVFHGKPLYAGRAQKKIEREAELKHTFETKYQGVNLYIKNI 292
Query: 280 APETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALG 339
+++ L ++F FG + + V++D + KGFGFVC T+ DEA A+ +NG +G
Sbjct: 293 DDSIDNDKLREVFSQFGTITSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIG 352
Query: 340 DRLLQVSFKTHKPL 353
+ L V+ K +
Sbjct: 353 TKPLYVALAQRKDI 366
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 45/262 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +T ++L+ L + G + + ++ D+ T +S G+ F N+ + DA + ++
Sbjct: 188 TNVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANF-ESADAAKNVV 246
Query: 87 EL-NGLKLQNKSIKVSYARPSSEAIKR--------------ANLYVSGLPKHMTQEDLEN 131
E+ NG K + YA + + I+R NLY+ + + + L
Sbjct: 247 EIENGKVFHGKPL---YAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLRE 303
Query: 132 LFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+F +GTI ++ ++ D A+ SKG GFV + EA A+ E+NG
Sbjct: 304 VFSQFGTITSAVVMKDDKAT---------------TSKGFGFVCYTSPDEATRAVTEMNG 348
Query: 192 TIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKF-- 249
+ ++P+ V A R A L Q + F A MR P + F
Sbjct: 349 RMI--GTKPLYVALAQ----RKDIRRAQLEMQ--HQQKFKAGMRQTMAPAYSGGPVFFTP 400
Query: 250 APLTADLLNNSMLP-PKSLHGS 270
AP+T ++ M+P P++ +G+
Sbjct: 401 APVTPAVVYQQMMPRPRNWNGA 422
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ ++L+ +FS G + S +++D S G+GFV Y ++A RA
Sbjct: 283 QGVNLYIKNIDDSIDNDKLREVFSQFGTITSAVVMKDDKATTSKGFGFVCYTSPDEATRA 342
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + K + V+ A+ + I+RA L
Sbjct: 343 VTEMNGRMIGTKPLYVALAQ--RKDIRRAQL 371
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+T +S GYGFV+Y E AE AI
Sbjct: 138 NIFIKNLDEAIDNKALHDTFAAFGTVLSCKVATDET-GRSKGYGFVHYETAEAAENAIKA 196
Query: 88 LNGLKLQNKSIKVSY-----ARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + R S RA NLYV L +TQ++ LF+ YG +
Sbjct: 197 VNGMLLNDKKVYVGHHISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNV 256
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ I D+ SKG GFV F H EA+ A+ ELN +G
Sbjct: 257 TSAVISVDEEGK----------------SKGFGFVNFETHDEAQKAVDELNDFELKGKK- 299
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R + L R + A L ++++
Sbjct: 300 -LFVSRAQKKAEREEEL----------RRSYEQAK------LEKLSKYQ----------- 331
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL + +D+ L F PFG + + KV+RD + + KGFGFVC
Sbjct: 332 -----------GVNLYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRD-EKGQSKGFGFVC 379
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +N +G + L VS +
Sbjct: 380 FSSPDEATKAVAEMNNKMIGTKPLYVSLAQRR 411
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 69/328 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 48 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 107
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++N+ ++ +++ P+ + N+++ L + + + L + F +GT+++ +
Sbjct: 108 EQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGTVLSCK 167
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ SKG GFV + AE+A++ +NG +
Sbjct: 168 VATDETGR----------------SKGYGFVHYETAEAAENAIKAVNGML---------- 201
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S K + A N
Sbjct: 202 ----------------LNDKKVYVGH------HISRKERQS---KLEEMRAQFTN----- 231
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V NL PE + +LF +G V + + D + K KGFGFV +
Sbjct: 232 ----------LYVKNLDPEVTQDEFIELFKKYGNVTSAVISVD-EEGKSKGFGFVNFETH 280
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA A+ LN + L + L VS K
Sbjct: 281 DEAQKAVDELNDFELKGKKLFVSRAQKK 308
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
++ ++ R + ++ Q +NL V + +TQ+E LF G V S + D+ +S
Sbjct: 211 HHISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEE-GKS 269
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKRA----------- 113
G+GFVN+ ++A++A+ ELN +L+ K + VS A+ + E ++R+
Sbjct: 270 KGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSK 329
Query: 114 ----NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
NLY+ L + + L F P+GTI + +++ D+ SK
Sbjct: 330 YQGVNLYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRDEKGQ----------------SK 373
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH 229
G GFV F+ EA A+ E+N + ++P+ V A R + L + + AQ +R
Sbjct: 374 GFGFVCFSSPDEATKAVAEMNNKMI--GTKPLYVSLAQRREVRRQQLESQI-AQRNQIRM 430
Query: 230 FAAAM-----RHFGNPLHHSARFKFAPLTADLLN---NSMLPPKSLHGSGWCIFV---YN 278
AA + PL++ F P ++ MLPP+ +G + V Y
Sbjct: 431 QQAAAAGLPGSYVNGPLYYPPGPGFPPQPRGMMGYPQPGMLPPRPRYGPNGQVPVPGPYG 490
Query: 279 LAP 281
AP
Sbjct: 491 QAP 493
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 15/179 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT+ EL LFS GE+ K+IR + T S YGFV+Y A A+
Sbjct: 41 TNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVN 100
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
++G + + K +KV++ARPS ++LYV LP +M ++ + LF YG I+ +L
Sbjct: 101 GMDGYETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLR 160
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
K + S+G+ F++F +AE A ++ + EGAS P+TVKF
Sbjct: 161 HKFNNR---------------SRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKF 204
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL 338
L + ++ L +LF FG ++ K++R +T +GFV + +A A+ ++GY
Sbjct: 48 LPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGYET 107
Query: 339 GDRLLQVSF 347
+ L+V+F
Sbjct: 108 RGKRLKVAF 116
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 60/333 (18%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E+AERAI +
Sbjct: 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEK 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V A + A + N+Y+ L + M E L++LF +G
Sbjct: 158 MNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDLFSRFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SKG GFV F +H +A A+ E+NG G +
Sbjct: 218 LSVKVMTDESGK----------------SKGFGFVSFERHEDARKAVDEMNGKDLNG--K 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D
Sbjct: 260 QIYVGRAQKKVERQTEL-----------------------------KHKFGQMKQDKPKI 290
Query: 260 SMLP-PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+P +S+ G ++V NL +D L + F PFG + + KV + + KGFGFV
Sbjct: 291 EQVPQDRSVRCQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFV 348
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG + + L V+ K
Sbjct: 349 CFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 381
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 142/328 (43%), Gaps = 70/328 (21%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
SD + ++L V + +T+ L FS G + S ++ RD+TT +SLGY VN+ + E
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLE 63
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +N ++ K +++ +++ PS N++V L + + + L + F +G
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFG 123
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++CD+ SKG GFV F EAE A++++NG
Sbjct: 124 NILSCKVVCDENG-----------------SKGYGFVHFETQEEAERAIEKMNGM----- 161
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
F N K ++ A + F N
Sbjct: 162 -------FLND----RKVFVGRFKSRRDRQAELGARAKEFTN------------------ 192
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+++ NL + +D L LF FG +VKV+ D ++ K KGFGF
Sbjct: 193 ----------------VYIKNLGEDMDDERLQDLFSRFGPALSVKVMTD-ESGKSKGFGF 235
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQV 345
V +++A A+ +NG L + + V
Sbjct: 236 VSFERHEDARKAVDEMNGKDLNGKQIYV 263
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 48/219 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + M E LQ LFS G S K++ D++ +S G+GFV++ R EDA +A+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDES-GKSKGFGFVSFERHEDARKAVD 249
Query: 87 ELNGLKLQNKSIKVSYA--------------------RPSSEAIKR--------ANLYVS 118
E+NG L K I V A +P E + + NLYV
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVK 309
Query: 119 GLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ 178
L + E L F P+GTI ++++ E R SKG GFV F+
Sbjct: 310 NLDDGIDDERLRKEFSPFGTITSAKVTM-----EGGR------------SKGFGFVCFSS 352
Query: 179 HIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
EA A+ E+NG I A++P+ V A R L+
Sbjct: 353 PEEATKAVTEMNGRIV--ATKPLYVALAQRKEERQAHLS 389
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 60/333 (18%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E+AERAI +
Sbjct: 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS + A + A + N+Y+ L + M E L++LF +G
Sbjct: 158 MNGMFLNDHKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDLFGRFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDESGK----------------SKGFGFVSFERHEDARKAVEEMNGKDLNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KHKFGQMKQDKHKI 290
Query: 260 SMLP-PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+P +S+ G ++V NL +D L + F PFG + + KV + + KGFGFV
Sbjct: 291 ERVPQDRSVRCKGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFV 348
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG + + L V+ K
Sbjct: 349 CFSSPEEATKAVTEMNGKIVATKPLYVALAQRK 381
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 70/328 (21%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
SD + ++L V + +T+ L FS G + S ++ RD+ T +SLGY VN+ + E
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLE 63
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +N ++ K +++ +++ PS N++V L + + + L + F +G
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFG 123
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++CD+ SKG GFV F EAE A++++NG
Sbjct: 124 NILSCKVVCDENG-----------------SKGYGFVHFETQEEAERAIEKMNGM----- 161
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
F N K ++ A + F N
Sbjct: 162 -------FLND----HKVFVGRFKSRRDRQAELGARAKEFTN------------------ 192
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+++ NL + +D L LFG FG +VKV+ D ++ K KGFGF
Sbjct: 193 ----------------VYIKNLGEDMDDERLQDLFGRFGPALSVKVMTD-ESGKSKGFGF 235
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQV 345
V +++A A++ +NG L + + V
Sbjct: 236 VSFERHEDARKAVEEMNGKDLNGKQIYV 263
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 48/219 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + M E LQ LF G S K++ D++ +S G+GFV++ R EDA +A+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDES-GKSKGFGFVSFERHEDARKAVE 249
Query: 87 ELNGLKLQNKSIKVSYAR--------------------------PSSEAI--KRANLYVS 118
E+NG L K I V A+ P ++ K NLYV
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVK 309
Query: 119 GLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ 178
L + E L F P+GTI ++++ E R SKG GFV F+
Sbjct: 310 NLDDGIDDERLRKEFSPFGTITSAKVTM-----EGGR------------SKGFGFVCFSS 352
Query: 179 HIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
EA A+ E+NG I A++P+ V A R L+
Sbjct: 353 PEEATKAVTEMNGKIV--ATKPLYVALAQRKEERQAHLS 389
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 60/333 (18%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E+AERAI +
Sbjct: 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS + A + A + N+Y+ L + M E L++LF +G
Sbjct: 158 MNGMFLNDHKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDLFGRFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDESGK----------------SKGFGFVSFERHEDARKAVEEMNGKDLNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KHKFGQMKQDKHKI 290
Query: 260 SMLP-PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+P +S+ G ++V NL +D L + F PFG + + KV + + KGFGFV
Sbjct: 291 ERVPQDRSVRCKGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFV 348
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG + + L V+ K
Sbjct: 349 CFSSPEEATKAVTEMNGKIVATKPLYVALAQRK 381
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 70/328 (21%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
SD + ++L V + +T+ L FS G + S ++ RD+ T +SLGY VN+ + E
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLE 63
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +N ++ K +++ +++ PS N++V L + + + L + F +G
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFG 123
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++CD+ SKG GFV F EAE A++++NG
Sbjct: 124 NILSCKVVCDENG-----------------SKGYGFVHFETQEEAERAIEKMNGM----- 161
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
F N K ++ A + F N
Sbjct: 162 -------FLND----HKVFVGRFKSRRDRQAELGARAKEFTN------------------ 192
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+++ NL + +D L LFG FG +VKV+ D ++ K KGFGF
Sbjct: 193 ----------------VYIKNLGEDMDDERLQDLFGRFGPALSVKVMTD-ESGKSKGFGF 235
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQV 345
V +++A A++ +NG L + + V
Sbjct: 236 VSFERHEDARKAVEEMNGKDLNGKQIYV 263
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 48/219 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + M E LQ LF G S K++ D++ +S G+GFV++ R EDA +A+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDES-GKSKGFGFVSFERHEDARKAVE 249
Query: 87 ELNGLKLQNKSIKVSYAR--------------------------PSSEAI--KRANLYVS 118
E+NG L K I V A+ P ++ K NLYV
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVK 309
Query: 119 GLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ 178
L + E L F P+GTI ++++ E R SKG GFV F+
Sbjct: 310 NLDDGIDDERLRKEFSPFGTITSAKVTM-----EGGR------------SKGFGFVCFSS 352
Query: 179 HIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
EA A+ E+NG I A++P+ V A R L+
Sbjct: 353 PEEATKAVTEMNGKIV--ATKPLYVALAQRKEERQAHLS 389
>gi|358339903|dbj|GAA47875.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 471
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 68/89 (76%)
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ +P H + WC+F+ NL P+ E+ LW+LFGPFGAV++VKVVR+P T +C+G GFV
Sbjct: 369 TTVPGNYAHTTDWCLFLCNLPPDIEEATLWRLFGPFGAVRSVKVVREPGTNRCRGTGFVN 428
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
MTNY EA+ AIQ+LNGY LG+R LQV+ K
Sbjct: 429 MTNYAEALLAIQNLNGYPLGNRHLQVTMK 457
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 15/84 (17%)
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAE 183
M+Q+ LE+LF G IITSRIL D +S+G+GF+RF+Q IEAE
Sbjct: 1 MSQQQLEDLFNSCGRIITSRILYDSTTG---------------LSRGVGFIRFDQRIEAE 45
Query: 184 HAMQELNGTIPEGASEPITVKFAN 207
A+++LNG IP A+EPITVK AN
Sbjct: 46 EAIRKLNGVIPANATEPITVKLAN 69
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
M+Q++L+ LF+S G + + +++ D TT S G GF+ + + +AE AI +LNG+ N +
Sbjct: 1 MSQQQLEDLFNSCGRIITSRILYDSTTGLSRGVGFIRFDQRIEAEEAIRKLNGVIPANAT 60
Query: 98 IKVS 101
++
Sbjct: 61 EPIT 64
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L + +P + + L LF G V S K++R+ T + G GFVN +A AI L
Sbjct: 383 LFLCNLPPDIEEATLWRLFGPFGAVRSVKVVREPGTNRCRGTGFVNMTNYAEALLAIQNL 442
Query: 89 NGLKLQNKSIKVSYARP-SSEAIKRANLY 116
NG L N+ ++V+ P +E + +LY
Sbjct: 443 NGYPLGNRHLQVTMKLPVCAEMLGLHSLY 471
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 60/333 (18%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E+AERAI +
Sbjct: 100 NIFVKNLDRSIDSKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEEAERAIEK 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V A + A + N+Y+ L + M E L+ LF +G
Sbjct: 158 MNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQGLFSKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A A+ E+NG G +
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDARKAVDEMNGKDLNG--K 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D
Sbjct: 260 QIYVGRAQKKVERQTEL-----------------------------KHKFGQMKQDKHKV 290
Query: 260 SMLPPK-SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+P S+ G ++V NL +D L + F PFG + + KV + + KGFGFV
Sbjct: 291 EQVPQDISVRCQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFV 348
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG + + L V+ K
Sbjct: 349 CFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 381
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 70/328 (21%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
SD + ++L V + +T+ L FSS G + S ++ RD+TT +SLGY VN+ + E
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLE 63
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +N ++ K +++ +++ PS N++V L + + + L + F +G
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFG 123
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++CD+ SKG GFV F EAE A++++NG
Sbjct: 124 NILSCKVVCDENG-----------------SKGYGFVHFETQEEAERAIEKMNGM----- 161
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
F N K ++ A + F N
Sbjct: 162 -------FLND----RKVFVGRFKSRRDRQAELGARAKEFTN------------------ 192
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+++ NL + +D L LF FG +VKV+ D ++ K KGFGF
Sbjct: 193 ----------------VYIKNLGEDMDDERLQGLFSKFGPALSVKVMTD-ESGKSKGFGF 235
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQV 345
V +++A A+ +NG L + + V
Sbjct: 236 VSFERHEDARKAVDEMNGKDLNGKQIYV 263
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + M E LQ LFS G S K++ D++ +S G+GFV++ R EDA +A+
Sbjct: 191 TNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDES-GKSKGFGFVSFERHEDARKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE----------------------------AIKRANLYVS 118
E+NG L K I V A+ E + NLYV
Sbjct: 250 EMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVK 309
Query: 119 GLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQ 178
L + E L F P+GTI ++++ E R SKG GFV F+
Sbjct: 310 NLDDGIDDERLRKEFSPFGTITSAKVTM-----EGGR------------SKGFGFVCFSS 352
Query: 179 HIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
EA A+ E+NG I A++P+ V A R L+
Sbjct: 353 PEEATKAVTEMNGRIV--ATKPLYVALAQRKEERQAHLS 389
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 147/334 (44%), Gaps = 72/334 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + L FS+ G + SCK++ D+ ++ G+GFV++ E AERAI +
Sbjct: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSK--GHGFVHFETEEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRA----------NLYVSGLPKHMTQEDLENLFRPYG 137
+NG+ L ++ KV R S+ + A N+Y+ M E L LF +G
Sbjct: 158 MNGMLLNDR--KVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFG 215
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++ D+ SKG GFV F +H +A+ A+ E+NG
Sbjct: 216 QILSVKVMTDEGGK----------------SKGFGFVSFERHEDAQKAVDEMNGK----- 254
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
LN +H + H + KF +T D
Sbjct: 255 ---------------------ELNG-----KHIYVGRAQKKDDRHTELKHKFEQVTQD-- 286
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
KS+ G ++V NL +D L + F PFG + + KV+ + + KGFGF
Sbjct: 287 -------KSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGF 337
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC ++ +EA A+ +NG + + L V+ K
Sbjct: 338 VCFSSPEEATKAVSEMNGRIVATKPLYVALAQRK 371
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G + S ++ RD T +SLGY VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ D+ SKG GFV F AE A++++NG +
Sbjct: 131 VSDENG-----------------SKGHGFVHFETEEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K +Q + F N
Sbjct: 163 -----LNDRKVFVGRFKSQKEREAELGTGTKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N +D L LFG FG + +VKV+ D + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDRMDDETLNGLFGRFGQILSVKVMTD-EGGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKHIYV 263
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 38/236 (16%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
+Q R ++ +N+ + M E L LF G++ S K++ D+ +S G+
Sbjct: 175 SQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEG-GKSKGF 233
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------------------AIKR 112
GFV++ R EDA++A+ E+NG +L K I V A+ + +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQG 293
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NLYV L + E L+ F P+GTI +++++ +E R SKG G
Sbjct: 294 INLYVKNLDDGIDDERLQKEFSPFGTITSTKVM-----TEGGR------------SKGFG 336
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
FV F+ EA A+ E+NG I A++P+ V A R L + A++R
Sbjct: 337 FVCFSSPEEATKAVSEMNGRIV--ATKPLYVALAQRKEERQAHLTNQYIQRMASVR 390
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 147/334 (44%), Gaps = 72/334 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + L FS+ G + SCK++ D+ ++ G+GFV++ E AERAI +
Sbjct: 75 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSK--GHGFVHFETEEAAERAIEK 132
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRA----------NLYVSGLPKHMTQEDLENLFRPYG 137
+NG+ L ++ KV R S+ + A N+Y+ M E L LF +G
Sbjct: 133 MNGMLLNDR--KVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFG 190
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++ D+ SKG GFV F +H +A+ A+ E+NG
Sbjct: 191 QILSVKVMTDEGGK----------------SKGFGFVSFERHEDAQKAVDEMNGK----- 229
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
LN +H + H + KF +T D
Sbjct: 230 ---------------------ELNG-----KHIYVGRAQKKDDRHTELKHKFEQVTQD-- 261
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
KS+ G ++V NL +D L + F PFG + + KV+ + + KGFGF
Sbjct: 262 -------KSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGF 312
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC ++ +EA A+ +NG + + L V+ K
Sbjct: 313 VCFSSPEEATKAVSEMNGRIVATKPLYVALAQRK 346
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 70/305 (22%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L FSS G + S ++ RD T +SLGY VN+ + DAERA+ +N ++ K +++ +
Sbjct: 2 LYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 103 AR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSG 160
++ PS N+++ L K + + L + F +G I++ +++ D+
Sbjct: 62 SQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG---------- 111
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
SKG GFV F AE A++++NG + K
Sbjct: 112 -------SKGHGFVHFETEEAAERAIEKMNGML----------------LNDRKVFVGRF 148
Query: 221 NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLA 280
+Q + F N +++ N
Sbjct: 149 KSQKEREAELGTGTKEFTN----------------------------------VYIKNFG 174
Query: 281 PETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
+D L LFG FG + +VKV+ D + K KGFGFV +++A A+ +NG L
Sbjct: 175 DRMDDETLNGLFGRFGQILSVKVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNG 233
Query: 341 RLLQV 345
+ + V
Sbjct: 234 KHIYV 238
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 38/236 (16%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
+Q R ++ +N+ + M E L LF G++ S K++ D+ +S G+
Sbjct: 150 SQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEG-GKSKGF 208
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------------------AIKR 112
GFV++ R EDA++A+ E+NG +L K I V A+ + +
Sbjct: 209 GFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQG 268
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NLYV L + E L+ F P+GTI +++++ +E R SKG G
Sbjct: 269 INLYVKNLDDGIDDERLQKEFSPFGTITSTKVM-----TEGGR------------SKGFG 311
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
FV F+ EA A+ E+NG I A++P+ V A R L + A++R
Sbjct: 312 FVCFSSPEEATKAVSEMNGRIV--ATKPLYVALAQRKEERQAHLTNQYIQRMASVR 365
>gi|253771010|gb|ACT35655.1| elav-like protein 2 [Macrostomum lignano]
Length = 422
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 77/119 (64%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ + +E + LF SV V+ K+ RDK + S G+GF +Y EDA RA+
Sbjct: 7 TNLIINYLPQAFSDDEFRALFGSVAPVKRAKVCRDKRSGYSFGFGFCEFYTAEDASRAVR 66
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LNGL+L K+IKV++AR S K NL+++ LP +T ED+ + P+G II +IL
Sbjct: 67 MLNGLQLHRKTIKVAHARLQSSESKNCNLHITNLPPTVTAEDIRAVLEPHGGIINCKIL 125
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 19/89 (21%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKV--------------VRDPQTYKCKGFGFVC 319
+ V NL P T++ LW +F FG + V++ ++ P GF
Sbjct: 337 VSVCNLPPGTDERQLWSMFCQFGGLAEVRLEPSSGRQPAPAEGDLQPPGASAAVGFA--- 393
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFK 348
+Y A A+ NG +LG R LQV +
Sbjct: 394 --SYQAAASAVAHWNGQSLGGRQLQVWLR 420
>gi|170055898|ref|XP_001863788.1| RNA-binding protein [Culex quinquefasciatus]
gi|167875756|gb|EDS39139.1| RNA-binding protein [Culex quinquefasciatus]
Length = 263
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 54/193 (27%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N +NLIVNY+PQ M+++ A+
Sbjct: 100 NYSGTNLIVNYIPQDMSEQA--------------------------------------AQ 121
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
RAI LNG ++NK +KVSYARP S+ IK NLY++ LP+ +T E L+ +F YGTI+
Sbjct: 122 RAIRCLNGYTVRNKRLKVSYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQK 181
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
IL DK+ +G P +G+ FVRFN+ EA+ A+ LN IP+G+++P+
Sbjct: 182 NILRDKL---------TGHP------RGVAFVRFNKREEAQEAISALNNVIPQGSNQPLN 226
Query: 203 VKFANSPAGRAKA 215
V+ A+ GRAKA
Sbjct: 227 VRIADD-HGRAKA 238
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
QSD + + +NL + +P+T+T E+L +F G + ++RDK T G FV + +
Sbjct: 145 QSD-DIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGHPRGVAFVRFNKR 203
Query: 79 EDAERAIIELNGLKLQ--NKSIKVSYARPSSEAIKRANLYV 117
E+A+ AI LN + Q N+ + V A A +A L+V
Sbjct: 204 EEAQEAISALNNVIPQGSNQPLNVRIADDHGRA--KAALFV 242
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 69/329 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+T S G+GFV+Y + A++AI++
Sbjct: 97 NIFIKNLDKSVDHKALFDTFSAFGNILSCKVVTDETNV-SKGFGFVHYESQDSADKAIMK 155
Query: 88 LNGLKLQNKSI-----KVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+NG+ + ++ + K S R ++ +K N+YV L + + +E+L +L PYG I
Sbjct: 156 VNGMIINDQKVFVGPFKSSKERGQTQELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNL 215
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
I+ D+ + SKG GF F EA++ ++ NG + G I
Sbjct: 216 TIMSDEKSK----------------SKGFGFANFETPDEAKNCVEAENGKLFHGKV--IY 257
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSML 262
V GRA+ M A L H K+
Sbjct: 258 V-------GRAQ----------KKMEREAE--------LKHKFETKY------------- 279
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
G +++ N+ + + L F +G + + KV+RD ++ KGFGFVC T
Sbjct: 280 -------QGVNLYIKNIDDSIDSDKLRSTFAAYGTITSAKVMRDDKSTSSKGFGFVCYTT 332
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA A+ ++G +G++ L V+F K
Sbjct: 333 PDEASKAVAEMHGRMVGNKPLYVAFAQRK 361
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+S+L V + Q +T +L +F+ VG V + ++ RD TT +SL Y +VNY+ DAERA+
Sbjct: 7 SSSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAERAL 66
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ K+ ++ +++ PS N+++ L K + + L + F +G I++ +
Sbjct: 67 DTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFGNILSCK 126
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
++ D+ +SKG GFV + A+ A+ ++NG I
Sbjct: 127 VVTDET----------------NVSKGFGFVHYESQDSADKAIMKVNGMI 160
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + + +EEL+ L G++ + ++ D+ + +S G+GF N+ ++A+ +
Sbjct: 186 TNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKS-KSKGFGFANFETPDEAKNCVE 244
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRANLYVSGLPKHMTQEDLENLFRP 135
NG K I V A+ E + NLY+ + + + L + F
Sbjct: 245 AENGKLFHGKVIYVGRAQKKMEREAELKHKFETKYQGVNLYIKNIDDSIDSDKLRSTFAA 304
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
YGTI +++++ D ++ SKG GFV + EA A+ E++G +
Sbjct: 305 YGTITSAKVMRDDKSTS---------------SKGFGFVCYTTPDEASKAVAEMHGRM-- 347
Query: 196 GASEPITVKFANSPAGRAKALAANLN 221
++P+ V FA R + L A N
Sbjct: 348 VGNKPLYVAFAQRKEIRRQHLEAQHN 373
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ ++L+ F++ G + S K++RD + S G+GFV Y ++A +A
Sbjct: 280 QGVNLYIKNIDDSIDSDKLRSTFAAYGTITSAKVMRDDKSTSSKGFGFVCYTTPDEASKA 339
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E++G + NK + V++A+ + I+R +L
Sbjct: 340 VAEMHGRMVGNKPLYVAFAQ--RKEIRRQHL 368
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 255 DLLNNSMLPPK-----------SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
D LNN+++ K SL SG IF+ NL + L+ F FG + + K
Sbjct: 67 DTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFGNILSCK 126
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS-FKTHK 351
VV D +T KGFGFV + D A AI +NG + D+ + V FK+ K
Sbjct: 127 VVTD-ETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKSSK 175
>gi|13898849|gb|AAK48899.1|AF357912_1 ribonucleoprotein [Labeo rohita]
Length = 179
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 64/78 (82%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
++ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY +DAE
Sbjct: 71 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 130
Query: 83 RAIIELNGLKLQNKSIKV 100
+AI LNGL+LQ K+IKV
Sbjct: 131 KAINTLNGLRLQTKTIKV 148
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 89 NGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDK 148
NG ++S S + NL V+ LP++MTQE+ +LF G I + +++ DK
Sbjct: 51 NGPSSNSRSCPSPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 110
Query: 149 MASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+ +++ G GFV + +AE A+ LNG
Sbjct: 111 ITGQSL---------------GYGFVNYIDPKDAEKAINTLNG 138
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
LFG G +++ K+VRD T + G+GFV + +A AI +LNG L + ++V +
Sbjct: 94 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVEAFSQ 153
Query: 351 KPL 353
P
Sbjct: 154 SPF 156
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 142/334 (42%), Gaps = 70/334 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + L F++ G++ SCK+ D T A S GYGFV+Y E AE AI
Sbjct: 146 NIFIKNLDETIDNKALHDTFAAFGDILSCKVAMDSTGA-SKGYGFVHYVTAESAEAAIKG 204
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG++L +K + V P E + NLY+ LP +T E+L +F YG +
Sbjct: 205 VNGMQLNDKVVFVGIHVPRRERQAKIDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPV 264
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ + D+ +G GFV + H A A++ L+
Sbjct: 265 TSAAVQADESGKH----------------RGFGFVNYENHESASKAVEALHD-------- 300
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFA--AAMRHFGNPLHHSARFKFAPLTADLL 257
K N+ A A + A +R H +++
Sbjct: 301 --------------KDYKGNILYVARAQKRVERDAELRR----AHEQQKYE--------- 333
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+L G +++ NL E +D L F PFG + + KV++D + +GFGF
Sbjct: 334 -------TTLKYQGVNLYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKDDKGV-SRGFGF 385
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC + DEA A+ +NG LG + L VS K
Sbjct: 386 VCFSAPDEATKAVAEMNGKMLGSKPLYVSLAQRK 419
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S ++ N++L V + T+T+ L +FS +G V S ++ RD T +SLGY +VNY
Sbjct: 50 SPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAA 109
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +LN ++NK+ ++ +++ PS + N+++ L + + + L + F +G
Sbjct: 110 DAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 169
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
I++ ++ D + SKG GFV + AE A++ +NG
Sbjct: 170 DILSCKVAMDSTGA----------------SKGYGFVHYVTAESAEAAIKGVNG 207
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 41/235 (17%)
Query: 15 RSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
R Q+ ++E +NL + +P +T EEL +FS G V S + D+ + + G+G
Sbjct: 223 RRERQAKIDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADE-SGKHRGFG 281
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---AIKRA--------------- 113
FVNY E A +A+ L+ + + V+ A+ E ++RA
Sbjct: 282 FVNYENHESASKAVEALHDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGV 341
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
NLY+ L E L+ F P+GTI + +++ D +S+G GF
Sbjct: 342 NLYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKDDKG----------------VSRGFGF 385
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
V F+ EA A+ E+NG + S+P+ V A R + L A ++ Q A MR
Sbjct: 386 VCFSAPDEATKAVAEMNGKM--LGSKPLYVSLAQRKDVRKQQLEAQMS-QRAQMR 437
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 71/317 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q + +L LF+ VG+V S ++ RD TT +SLGYG+VN+ +DA RA+
Sbjct: 35 TSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALD 94
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L N+SI++ Y+ PS AN+++ L K + + L + F +G I++ +I
Sbjct: 95 VLNFTPLNNRSIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKI 154
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D SG +SKG GFV+F+ A++A+ +LNG +
Sbjct: 155 ATD----------ASG------LSKGYGFVQFDNEEAAQNAIDKLNGML----------- 187
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
+N + + HF L R L+ NN
Sbjct: 188 ---------------INDKQVYVGHF----------LRKQDREN--ALSKTKFNN----- 215
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL+ T D L FG +G + + ++RD K + FGFV N D
Sbjct: 216 ---------VYVKNLSESTTDEELMINFGEYGTITSALIMRDADG-KSRCFGFVNFENPD 265
Query: 325 EAVFAIQSLNGYALGDR 341
+A A++ LNG D+
Sbjct: 266 DAAKAVEGLNGKKFDDK 282
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 64/331 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + + + L FSS G + SCK+ D + S GYGFV + E A+ AI
Sbjct: 123 ANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATD-ASGLSKGYGFVQFDNEEAAQNAID 181
Query: 87 ELNGLKLQNKSIKVSY---ARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTII 140
+LNG+ + +K + V + + A+ + N+YV L + T E+L F YGTI
Sbjct: 182 KLNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMINFGEYGTIT 241
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
++ I+ D A R F GFV F +A A++ LNG
Sbjct: 242 SALIMRD--ADGKSRCF--------------GFVNFENPDDAAKAVEGLNGK-------- 277
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
KF + KA + Q R F +++ A K+
Sbjct: 278 ---KFDDKEWYVGKAQKKSEREQELKGR-FEQSIKE--------AADKY----------- 314
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
G +++ NL D L ++F +G + + KV+RDP T +G GFV
Sbjct: 315 ---------PGLNLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDP-TGISRGSGFVAF 364
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + L V+ K
Sbjct: 365 STPEEATRALGEMNGKMFAGKPLYVALAQRK 395
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T EEL F G + S ++RD +S +GFVN+ +DA +A+
Sbjct: 214 NNVYVKNLSESTTDEELMINFGEYGTITSALIMRD-ADGKSRCFGFVNFENPDDAAKAVE 272
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRA-------NLYVSGLPKHMTQED 128
LNG K +K V A+ SE +IK A NLY+ L ++ E
Sbjct: 273 GLNGKKFDDKEWYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYLKNLDDTISDEK 332
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YGTI + +++ D IS+G GFV F+ EA A+ E
Sbjct: 333 LKEMFADYGTITSCKVMRDPTG----------------ISRGSGFVAFSTPEEATRALGE 376
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
+NG + A +P+ V A R + A L AQ + MR A
Sbjct: 377 MNGKM--FAGKPLYVALAQ----RKEERRARLQAQFSQMRPVA 413
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SL SG IF+ NL + L F FG + + K+ D KG+GFV N +
Sbjct: 116 SLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGL-SKGYGFVQFDNEE 174
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
A AI LNG + D+ + V
Sbjct: 175 AAQNAIDKLNGMLINDKQVYVG 196
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ M +E L ++F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D SG S+G GFV F +H +A+ A+ E+NG E +
Sbjct: 218 MSIRVMTDD----------SGK------SRGFGFVSFERHEDAQKAVDEMNGK--EMNGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
PI V GRA+ + QA R KF + D +
Sbjct: 260 PIYV-------GRAQ---KKVERQAELKR-------------------KFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLE--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A R F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAREFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + ++ L +F +G +++V+ D + K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTD-DSGKSRGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + + + V
Sbjct: 243 DAQKAVDEMNGKEMNGKPIYV 263
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M +E+L+ +F+ G S +++ D + +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDS-GKSRGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVML-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FSS G + SCK+ D ++ QS GYGFV Y E A++AI +
Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEK 183
Query: 88 LNGLKLQNKSIKVS-YAR-----PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
LNG+ L +K + V + R ++ K N+YV L + T +DL+N F YG I +
Sbjct: 184 LNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITS 243
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SKG GFV F +A A++ LNG
Sbjct: 244 AVVMKDGEGK----------------SKGFGFVNFENADDAARAVESLNGH--------- 278
Query: 202 TVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
KF + GR AQ + R +R+ N + +F+ + L
Sbjct: 279 --KFDDKEWYVGR---------AQKKSERETELRVRYEQNLKEAADKFQSSNL------- 320
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+V NL P D L ++F PFG V + KV+RDP KG GFV
Sbjct: 321 ---------------YVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNG-TSKGSGFVA 364
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A+ L+G + + L V+ K
Sbjct: 365 FATPEEATEAMSQLSGKMIESKPLYVAIAQRK 396
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 41/223 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T ++L++ F G++ S +++D +S G+GFVN+ +DA RA+
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVE 273
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG K +K V A+ SE + +NLYV L ++ E
Sbjct: 274 SLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEK 333
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F P+GT+ +S+++ D +GT SKG GFV F EA AM +
Sbjct: 334 LKEIFSPFGTVTSSKVMRDP----------NGT------SKGSGFVAFATPEEATEAMSQ 377
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
L+G + E S+P+ V A R + L AQ + +R A
Sbjct: 378 LSGKMIE--SKPLYVAIAQ----RKEDRRVRLQAQFSQVRPVA 414
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N++L V + +T +L F +G V + ++ RD T +SLGYG+VN+ +DA RAI
Sbjct: 35 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 94
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN + L K I+V Y+ PS N+++ L + + + L + F +G I++ +
Sbjct: 95 QELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCK 154
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D SKG GFV++ A+ A+++LNG +
Sbjct: 155 VAVDSSGQ----------------SKGYGFVQYANEESAQKAIEKLNGML 188
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V +L D+ L+ FG G V V+V RD T + G+G+V TN +A AIQ
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN L + ++V + P
Sbjct: 97 LNYIPLYGKPIRVMYSHRDP 116
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FSS G + SCK+ D ++ QS GYGFV Y E A++AI +
Sbjct: 109 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEK 167
Query: 88 LNGLKLQNKSIKVS-YAR-----PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
LNG+ L +K + V + R ++ K N+YV L + T +DL+N F YG I +
Sbjct: 168 LNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITS 227
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SKG GFV F +A A++ LNG
Sbjct: 228 AVVMKDGEGK----------------SKGFGFVNFENADDAARAVESLNGH--------- 262
Query: 202 TVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
KF + GR AQ + R +R+ N + +F+ + L
Sbjct: 263 --KFDDKEWYVGR---------AQKKSERETELRVRYEQNLKEAADKFQSSNL------- 304
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+V NL P D L ++F PFG V + KV+RDP KG GFV
Sbjct: 305 ---------------YVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNG-TSKGSGFVA 348
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A+ L+G + + L V+ K
Sbjct: 349 FATPEEATEAMSQLSGKMIESKPLYVAIAQRK 380
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 41/223 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T ++L++ F G++ S +++D +S G+GFVN+ +DA RA+
Sbjct: 199 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVE 257
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG K +K V A+ SE + +NLYV L ++ E
Sbjct: 258 SLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEK 317
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F P+GT+ +S+++ D +GT SKG GFV F EA AM +
Sbjct: 318 LKEIFSPFGTVTSSKVMRDP----------NGT------SKGSGFVAFATPEEATEAMSQ 361
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
L+G + E S+P+ V A R + L AQ + +R A
Sbjct: 362 LSGKMIE--SKPLYVAIAQ----RKEDRRVRLQAQFSQVRPVA 398
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N++L V + +T +L F +G V + ++ RD T +SLGYG+VN+ +DA RAI
Sbjct: 19 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 78
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN + L K I+V Y+ PS N+++ L + + + L + F +G I++ +
Sbjct: 79 QELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCK 138
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D SKG GFV++ A+ A+++LNG +
Sbjct: 139 VAVDSSGQ----------------SKGYGFVQYANEESAQKAIEKLNGML 172
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V +L D+ L+ FG G V V+V RD T + G+G+V TN +A AIQ
Sbjct: 21 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 80
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN L + ++V + P
Sbjct: 81 LNYIPLYGKPIRVMYSHRDP 100
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 26/192 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL-----------GYGFVNY 75
+NLIV+ +P+ T E+L+ LF GE+ES K++ ++ +L GYGFV +
Sbjct: 704 TNLIVHNIPKHFTNEDLKDLFEEFGEIESYKVVANRKAPSTLLPQQPPPQANMGYGFVKF 763
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRP 135
+E A AI +NG +K+IKVSYA P+S+ ANLY++ L H+T+EDL F
Sbjct: 764 VHSESAAAAIESMNGHMTDSKTIKVSYATPTSQQSTHANLYINRLEPHVTKEDLAEAFSK 823
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
+G ++ +RIL D + S+ +GFV F+ +A A+ +NG
Sbjct: 824 FGELVETRILMDLNTN---------------TSRCVGFVHFSNRRDALAALSAMNGANIS 868
Query: 196 GASEPITVKFAN 207
S PI VKFA+
Sbjct: 869 QQSTPIYVKFAD 880
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVV-----------RDPQTYKCKGFGFVCMTN 322
+ V+N+ + L LF FG +++ KVV + P G+GFV +
Sbjct: 706 LIVHNIPKHFTNEDLKDLFEEFGEIESYKVVANRKAPSTLLPQQPPPQANMGYGFVKFVH 765
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKT 349
+ A AI+S+NG+ + ++VS+ T
Sbjct: 766 SESAAAAIESMNGHMTDSKTIKVSYAT 792
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 248 KFAPLTADLLN--NSML----PPKSLHGSG-WCIFVYNLAPETEDNVLWQLFGPFGAVQN 300
+ +P+ LLN N+ PP L+ S + + V NL +++ +++LFG GA+ N
Sbjct: 1045 QISPIQTQLLNLYNTQAYVQQPPPPLNYSLLYSVHVSNLPNNSDEAYIYKLFGALGAIAN 1104
Query: 301 VKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
VK++ + Q + + A AI +LN ++G + L+V
Sbjct: 1105 VKMLNNHQ-------AIINYLTIEAAQNAIVNLNNKSVGGKTLKV 1142
>gi|6469495|emb|CAB61831.1| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 121
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
M N+T S S N +NLIVNY+PQ M EL LF ++G + +C+++RD T
Sbjct: 1 MANSTNS----LNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGY 56
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
S GYGFV++ DA RAI LNG+ ++NK IKVS+ARP E ++ NLYV+ L + +T
Sbjct: 57 SYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRSITD 116
Query: 127 EDLE 130
E LE
Sbjct: 117 EQLE 120
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 268 HGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAV 327
+ SG + V L + +D L+ LF G + +++RD +T G+GFV + +A+
Sbjct: 13 NNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADAL 72
Query: 328 FAIQSLNGYALGDRLLQVSF 347
AI +LNG + ++ ++VSF
Sbjct: 73 RAINNLNGITVRNKRIKVSF 92
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NL V+ LP+ M +L +LFR G I T RI+ R + +G S G G
Sbjct: 17 TNLIVNYLPQDMQDRELYSLFRTIGPINTCRIM---------RDYKTG------YSYGYG 61
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
FV F +A A+ LNG ++ I V FA P G
Sbjct: 62 FVDFGSEADALRAINNLNGITVR--NKRIKVSFA-RPGG 97
>gi|298710320|emb|CBJ31940.1| Xel-1 protein [Ectocarpus siliculosus]
Length = 573
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 103/179 (57%), Gaps = 21/179 (11%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
NLI+NY+P +T+ EL+++F+ G++ K++ D++T +S+GYGFV + E A A +
Sbjct: 109 NLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLA 168
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD 147
+NG+ + K IKVS ARPSS+ IK + LYV+ LP H +Q+ + +F R L D
Sbjct: 169 INGMAIDRKRIKVSIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFE------QCRTLVD 222
Query: 148 KMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
+ IS+ FV+F+ EA+ A++ +NG + GA + + VKFA
Sbjct: 223 PKTT---------------ISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 266
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L +F G + +VKVV D T K G+GFV T + A A ++NG A+ + ++VS
Sbjct: 124 LRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSI 183
>gi|6469493|emb|CAB61832.1| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 167
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
M N+T S S N +NLIVNY+PQ M EL LF ++G + +C+++RD T
Sbjct: 48 MANSTNS----LNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGY 103
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQ 126
S GYGFV++ DA RAI LNG+ ++NK IKVS+ARP E ++ NLYV+ L + +T
Sbjct: 104 SYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRSITD 163
Query: 127 EDLE 130
E LE
Sbjct: 164 EQLE 167
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG + V L + +D L+ LF G + +++RD +T G+GFV + +A+ A
Sbjct: 62 SGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRA 121
Query: 330 IQSLNGYALGDRLLQVSF 347
I +LNG + ++ ++VSF
Sbjct: 122 INNLNGITVRNKRIKVSF 139
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NL V+ LP+ M +L +LFR G I T RI+ R + +G S G G
Sbjct: 64 TNLIVNYLPQDMQDRELYSLFRTIGPINTCRIM---------RDYKTG------YSYGYG 108
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
FV F +A A+ LNG ++ I V FA P G
Sbjct: 109 FVDFGSEADALRAINNLNGITVR--NKRIKVSFA-RPGG 144
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F + G V SCK+ D+ +S GYGFV+Y E A+ AI
Sbjct: 131 NVFIKNLDEAIDNKALHDTFVAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAADNAIKS 189
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + E + NLY+ L +TQE+ LF YG +
Sbjct: 190 VNGMLLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNV 249
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+S + D+ SKG GFV + +H EA+ A+ EL+ T +G
Sbjct: 250 TSSLVATDEEGK----------------SKGFGFVNYERHEEAQRAVDELHDTDLKGKK- 292
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R L R + A L ++++
Sbjct: 293 -LFVARAQKKAEREDEL----------RRSYEQAK------LEKLSKYQ----------- 324
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL + +D+ L F PFGA+ + KV+RD + KGFGFVC
Sbjct: 325 -----------GINLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRD-EKGTSKGFGFVC 372
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +N +G + L VS +
Sbjct: 373 FSSPDEATKAVAEMNNKMIGTKPLYVSLAQRR 404
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 142/346 (41%), Gaps = 75/346 (21%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
YN ST S ++L V + T+T+ L +F+ +G V S ++ RD T +S
Sbjct: 29 YNPPAPQASTAPS------ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRS 82
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMT 125
LGY +VNY D ERA+ +LN ++N++ ++ +++ P+ + N+++ L + +
Sbjct: 83 LGYAYVNYLNAADGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAID 142
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
+ L + F +G +++ ++ D+ SKG GFV + A++A
Sbjct: 143 NKALHDTFVAFGNVLSCKVATDEHGR----------------SKGYGFVHYETAEAADNA 186
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA 245
++ +NG + LN + + H H S
Sbjct: 187 IKSVNGML--------------------------LNDKKVYVGH------HISRKERQS- 213
Query: 246 RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
K + A N +++ NL E +LF +G V + V
Sbjct: 214 --KLDEMKAQFTN---------------LYIKNLDTEVTQEEFTELFTRYGNVTSSLVAT 256
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D + K KGFGFV ++EA A+ L+ L + L V+ K
Sbjct: 257 D-EEGKSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKK 301
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 69/344 (20%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNE---QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS ++E Q +NL + + +TQEE LF+ G V S
Sbjct: 194 LLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSS- 252
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---AIKRA- 113
L+ +S G+GFVNY R E+A+RA+ EL+ L+ K + V+ A+ +E ++R+
Sbjct: 253 LVATDEEGKSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKKAEREDELRRSY 312
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLY+ L + L F P+G I + +++ D+ +
Sbjct: 313 EQAKLEKLSKYQGINLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDEKGT-------- 364
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV F+ EA A+ E+N + ++P+ V A R + L +
Sbjct: 365 --------SKGFGFVCFSSPDEATKAVAEMNNKM--IGTKPLYVSLAQRREVRRQQLESQ 414
Query: 220 LNAQAAAMRHFAAAMR-----HFGNPLHHSARFKFAPLTADLLN---NSMLPPKSLHGSG 271
+ AQ +R AA + P+++ F P ++ M+PP+ + +G
Sbjct: 415 I-AQRNQIRMQQAAAAGVPGGYINGPMYYPPGPGFPPQGRGMMGYGQPGMMPPRIRYPNG 473
Query: 272 WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGF 315
V ++ P + GP+G + PQ Y G+
Sbjct: 474 Q---VPSMPP---------VPGPYG--------QGPQPYGMPGY 497
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + + FS+ G + SC++ D+ A S GYGFV++ E A +AI +
Sbjct: 100 NVFIKNLDKTIDNKAMYDTFSAFGNILSCRVATDEEAA-SKGYGFVHFETEEAANKAISK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L NK + V P E K N+Y+ + + L +F YG I
Sbjct: 159 VNGMLLNNKKVYVGKFIPRKEREKMLGDKARCFTNVYIKNFGDELDDDKLLVIFEKYGKI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+++++ D SG ++G GFV F + AE A++ELNG +
Sbjct: 219 TSAKVMTDD----------SGK------NRGFGFVSFEEPDSAERAVEELNGK--DMGGR 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
P+ V GRA+ A Q+ RHF L + LN
Sbjct: 261 PLYV-------GRAQKKAER---QSELKRHFEQ-------------------LKQERLNR 291
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + FGPFG + + KV+ D + KGFGFVC
Sbjct: 292 Y---------QGVNLYVKNLDDALDDERLRKEFGPFGNITSAKVMTDANG-RSKGFGFVC 341
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 342 FSSPEEATKAVTEMNGRIVVSKPLYVALAQRK 373
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + ++L +F G++ S K++ D + ++ G+GFV++ + AERA+
Sbjct: 192 TNVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTD-DSGKNRGFGFVSFEEPDSAERAVE 250
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
ELNG + + + V A+ +E +KR NLYV L + E
Sbjct: 251 ELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVKNLDDALDDER 310
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G I +++++ D N R SKG GFV F+ EA A+ E
Sbjct: 311 LRKEFGPFGNITSAKVMTDA----NGR------------SKGFGFVCFSSPEEATKAVTE 354
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I S+P+ V A R LA+ + A MR
Sbjct: 355 MNGRIV--VSKPLYVALAQRKEDRKAHLASQYMHRIAGMR 392
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS+ G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++NK I++ +++ PS N+++ L K + + + + F +G I++ R+
Sbjct: 71 TMNFDAIKNKPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCRV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D+ A+ SKG GFV F A A+ ++NG +
Sbjct: 131 ATDEEAA----------------SKGYGFVHFETEEAANKAISKVNGML 163
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ F G + S K++ D +S G+GFV + E+A +A
Sbjct: 293 QGVNLYVKNLDDALDDERLRKEFGPFGNITSAKVMTD-ANGRSKGFGFVCFSSPEEATKA 351
Query: 85 IIELNGLKLQNKSIKVSYA-RPSSEAIKRANLY---VSGLPKHMTQEDLENLFRPYGTII 140
+ E+NG + +K + V+ A R A+ Y ++G+ M Q +F P GT +
Sbjct: 352 VTEMNGRIVVSKPLYVALAQRKEDRKAHLASQYMHRIAGMRMQMGQ-----MFPPGGTGV 406
Query: 141 TS 142
+
Sbjct: 407 AN 408
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F + G V SCK+ D+ +S GYGFV+Y E A+ AI
Sbjct: 131 NVFIKNLDEAIDNKALHDTFVAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAADNAIKS 189
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + E + NLY+ L +TQE+ LF YG +
Sbjct: 190 VNGMLLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNV 249
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+S + D+ SKG GFV + +H EA+ A+ EL+ T +G
Sbjct: 250 TSSLVATDEEGK----------------SKGFGFVNYERHEEAQRAVDELHDTDLKGKK- 292
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R L R + A L ++++
Sbjct: 293 -LFVARAQKKAEREDEL----------RRSYEQAK------LEKLSKYQ----------- 324
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL + +D+ L F PFGA+ + KV+RD + KGFGFVC
Sbjct: 325 -----------GVNLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRD-EKGTSKGFGFVC 372
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +N +G + L VS +
Sbjct: 373 FSSPDEATKAVAEMNNKMIGTKPLYVSLAQRR 404
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 142/346 (41%), Gaps = 75/346 (21%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
YN ST S ++L V + T+T+ L +F+ +G V S ++ RD T +S
Sbjct: 29 YNPPAPQASTAPS------ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRS 82
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMT 125
LGY +VNY D ERA+ +LN ++N++ ++ +++ P+ + N+++ L + +
Sbjct: 83 LGYAYVNYLNAADGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAID 142
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
+ L + F +G +++ ++ D+ SKG GFV + A++A
Sbjct: 143 NKALHDTFVAFGNVLSCKVATDEHGR----------------SKGYGFVHYETAEAADNA 186
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA 245
++ +NG + LN + + H H S
Sbjct: 187 IKSVNGML--------------------------LNDKKVYVGH------HISRKERQS- 213
Query: 246 RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
K + A N +++ NL E +LF +G V + V
Sbjct: 214 --KLDEMKAQFTN---------------LYIKNLDTEVTQEEFTELFTRYGNVTSSLVAT 256
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D + K KGFGFV ++EA A+ L+ L + L V+ K
Sbjct: 257 D-EEGKSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKK 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 69/344 (20%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNE---QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS ++E Q +NL + + +TQEE LF+ G V S
Sbjct: 194 LLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSS- 252
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---AIKRA- 113
L+ +S G+GFVNY R E+A+RA+ EL+ L+ K + V+ A+ +E ++R+
Sbjct: 253 LVATDEEGKSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKKAEREDELRRSY 312
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLY+ L + L F P+G I + +++ D+ +
Sbjct: 313 EQAKLEKLSKYQGVNLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDEKGT-------- 364
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV F+ EA A+ E+N + ++P+ V A R + L +
Sbjct: 365 --------SKGFGFVCFSSPDEATKAVAEMNNKM--IGTKPLYVSLAQRREVRRQQLESQ 414
Query: 220 LNAQAAAMRHFAAAMR-----HFGNPLHHSARFKFAPLTADLLN---NSMLPPKSLHGSG 271
+ AQ +R AA + P+++ F P ++ M+PP+ + +G
Sbjct: 415 I-AQRNQIRMQQAAAAGVPGGYINGPMYYPPGPGFPPQGRGMMGYGQPGMMPPRIRYPNG 473
Query: 272 WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGF 315
V ++ P + GP+G + PQ Y G+
Sbjct: 474 Q---VPSMPP---------VPGPYG--------QGPQPYGMPGY 497
>gi|195570612|ref|XP_002103301.1| GD19030 [Drosophila simulans]
gi|194199228|gb|EDX12804.1| GD19030 [Drosophila simulans]
Length = 244
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 17/179 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+NY+PQ MT+ EL LFS GE+ K+IR + T S YGFV++ A A+
Sbjct: 41 TNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTGISCCYGFVDFVSERQAAAAVY 100
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
LNG + + K +KV++ARP+ + NLYV+ LP +M ++ + LF PYG ++ +L
Sbjct: 101 NLNGYETRGKRLKVAFARPTE--YENTNLYVANLPTYMDEKKIRELFAPYGKLLDVTLLR 158
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
+ ++ +G+ F+ F +AE A ++ + +GA +P+ VKF
Sbjct: 159 HRFNNK---------------FRGVAFLDFELARDAEEAKYGMDRYMIKGAFKPLKVKF 202
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL 338
L + ++ L +LF +G ++ KV+R T +GFV + +A A+ +LNGY
Sbjct: 48 LPQDMTESELHRLFSKYGEIRKAKVIRHRDTGISCCYGFVDFVSERQAAAAVYNLNGYET 107
Query: 339 GDRLLQVSF 347
+ L+V+F
Sbjct: 108 RGKRLKVAF 116
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS G + SCK+ D ++ QS GYGFV Y E A++AI +
Sbjct: 125 NIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEK 183
Query: 88 LNGLKLQNKSIKVS-YAR-----PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
LNG+ L +K + V + R ++ K N+YV L + T +DL+N F YG I +
Sbjct: 184 LNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITS 243
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SKG GFV F +A A++ LNG
Sbjct: 244 AVVMKDGDGK----------------SKGFGFVNFENADDAARAVESLNGH--------- 278
Query: 202 TVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
KF + GR AQ + R +R+ N + +F+ + L
Sbjct: 279 --KFDDKEWYVGR---------AQKKSERETELRVRYEQNLKEAADKFQSSNL------- 320
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+V NL P D L ++F PFG V + KV+RDP KG GFV
Sbjct: 321 ---------------YVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNG-TSKGSGFVA 364
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ L+G + + L V+ K
Sbjct: 365 FSTPEEATEAMSQLSGKMIESKPLYVAIAQRK 396
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 37/204 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T ++L++ F G++ S +++D +S G+GFVN+ +DA RA+
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GDGKSKGFGFVNFENADDAARAVE 273
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG K +K V A+ SE + +NLYV L ++ E
Sbjct: 274 SLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEK 333
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F P+GT+ + +++ D +GT SKG GFV F+ EA AM +
Sbjct: 334 LKEIFSPFGTVTSCKVMRDP----------NGT------SKGSGFVAFSTPEEATEAMSQ 377
Query: 189 LNGTIPEGASEPITVKFANSPAGR 212
L+G + E S+P+ V A R
Sbjct: 378 LSGKMIE--SKPLYVAIAQRKEDR 399
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L FS +G V S ++ RD T +SLGYG+VN+ +DA RAI
Sbjct: 36 TSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQ 95
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
ELN + L K I+V Y+ PS N+++ L + + + L + F +G I++ ++
Sbjct: 96 ELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCKV 155
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D SKG GFV++ A+ A+++LNG +
Sbjct: 156 AVDSSGQ----------------SKGYGFVQYANEESAQKAIEKLNGML 188
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V +L D+ L+ F G V +V+V RD T + G+G+V TN +A AIQ
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN L + ++V + P
Sbjct: 97 LNYIPLYGKPIRVMYSHRDP 116
>gi|27497553|gb|AAO13018.1| RNA-binding protein HU [Oncorhynchus mykiss]
Length = 77
Score = 114 bits (285), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 62/77 (80%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +NLIVNY+PQ MTQEE + LF S+GE+ESCKL+RDK T QSLGYGFVNY DA++
Sbjct: 1 DSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADK 60
Query: 84 AIIELNGLKLQNKSIKV 100
AI LNGLKLQ K+IKV
Sbjct: 61 AINTLNGLKLQTKTIKV 77
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
+ NL V+ LP++MTQE+ ++LF G I + +++ DK+ + S G
Sbjct: 3 KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQ---------------SLGY 47
Query: 172 GFVRFNQHIEAEHAMQELNG 191
GFV + +A+ A+ LNG
Sbjct: 48 GFVNYVDPNDADKAINTLNG 67
Score = 41.6 bits (96), Expect = 0.57, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
LFG G +++ K+VRD T + G+GFV + ++A AI +LNG L + ++V
Sbjct: 23 LFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKV 77
>gi|195111486|ref|XP_002000309.1| GI10157 [Drosophila mojavensis]
gi|193916903|gb|EDW15770.1| GI10157 [Drosophila mojavensis]
Length = 356
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL++NY+P M + EL LF+S G + K+IRD T S YGFVNY + A +A+
Sbjct: 31 TNLLINYLPSDMQENELHQLFNSFGLLRQVKIIRDPETGASHCYGFVNYTNSISANKALN 90
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
+NG ++ K +KVS ARPSS+ K+ N+YV LP + +F +G I+ +L
Sbjct: 91 SMNGCPVRGKKLKVSMARPSSDDTKKTNIYVGNLPLSYDAAQVREIFERFGKIVDLNLLK 150
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D+ ++ S+G FVR+ E A+ LN + E P+ V+
Sbjct: 151 DRYTNQ---------------SRGTAFVRYEMRASVEKAILALNDFVVERGHPPLHVRLV 195
Query: 207 NSP 209
P
Sbjct: 196 KRP 198
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 265 KSLHGSGWCIFVYNLAP-ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
K + SG + N P + ++N L QLF FG ++ VK++RDP+T +GFV TN
Sbjct: 23 KEIQQSGGTNLLINYLPSDMQENELHQLFNSFGLLRQVKIIRDPETGASHCYGFVNYTNS 82
Query: 324 DEAVFAIQSLNGYALGDRLLQVSF 347
A A+ S+NG + + L+VS
Sbjct: 83 ISANKALNSMNGCPVRGKKLKVSM 106
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + + +N+ V +P + +++ +F G++ L++D+ T QS G FV Y
Sbjct: 110 SSDDTKKTNIYVGNLPLSYDAAQVREIFERFGKIVDLNLLKDRYTNQSRGTAFVRYEMRA 169
Query: 80 DAERAIIELNGLKLQ 94
E+AI+ LN ++
Sbjct: 170 SVEKAILALNDFVVE 184
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D++ A S GYGFV++ E A ++I +
Sbjct: 143 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGA-SKGYGFVHFETEEAANKSIDK 201
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + MT++ L+++F YGTI
Sbjct: 202 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTEDKLKDMFEKYGTI 261
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ ++ M+ ++ + S+G GFV F AE A+ ELNG I EG
Sbjct: 262 TSHKV----MSKDDGK------------SRGFGFVAFEDPDAAEQAVLELNGKEIAEGKC 305
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ A + KF L + LN
Sbjct: 306 MYV---------GRAQKKAER----------------------QQELKRKFEQLKIERLN 334
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 335 RY---------QGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME--EGRSKGFGFV 383
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + +EA A+ +NG +G + L V+ K
Sbjct: 384 CFSQPEEATKAVTEMNGRIVGSKPLYVALAQRK 416
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 132/359 (36%), Gaps = 112/359 (31%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY----------- 75
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVVNVV 70
Query: 76 --------------------------------YRTEDAERAIIELNGLKLQNKSIKVSYA 103
+ T +AERA+ +N ++ + I++ ++
Sbjct: 71 TQRGFTRMAACVPHTCLANVPTIVPTMLDPRPHSTVNAERALDTMNFDMIKGRPIRIMWS 130
Query: 104 R--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGT 161
+ PS N+++ L K++ + + + F +G I++ ++ D+ +
Sbjct: 131 QRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGA---------- 180
Query: 162 PEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLN 221
SKG GFV F A ++ ++NG + LN
Sbjct: 181 ------SKGYGFVHFETEEAANKSIDKVNGML--------------------------LN 208
Query: 222 AQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAP 281
+ + G + R K A L N ++V N
Sbjct: 209 GKKV----------YVGKFIPRKEREKELGEKAKLFTN--------------VYVKNFGE 244
Query: 282 ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
+ ++ L +F +G + + KV+ K +GFGFV + D A A+ LNG + +
Sbjct: 245 DMTEDKLKDMFEKYGTITSHKVMSK-DDGKSRGFGFVAFEDPDAAEQAVLELNGKEIAE 302
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + T+ E L+ F+ G + S K++ ++ +S G+GFV + + E+A +A
Sbjct: 337 QGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQPEEATKA 394
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG + +K + V+ A+
Sbjct: 395 VTEMNGRIVGSKPLYVALAQ 414
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 143/332 (43%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F + G V SCK+ D+ +S GYGFV+Y E AE AI
Sbjct: 134 NIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQ-GRSKGYGFVHYETAEAAETAIKA 192
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V P E + NLY+ L +TQE+ E LF YG++
Sbjct: 193 VNGMLLNDKKVYVGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSV 252
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ + D SKG GFV + H EA+ A+ L+ T +G
Sbjct: 253 TSAIVQVDDEGR----------------SKGFGFVNYESHEEAQAAVDNLHDTDLKGKK- 295
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R + L R + A + ++++
Sbjct: 296 -LYVTRAQKKAEREEEL----------RRSYEQAK------MEKLSKYQ----------- 327
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL + +D+ L F PFG + + KV+ D + KGFGFVC
Sbjct: 328 -----------GVNLYVKNLEDDVDDDKLRAEFEPFGTITSCKVMSD-EKGSSKGFGFVC 375
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA AI +N +G + L VS +
Sbjct: 376 FSSPDEATKAIAEMNNKMIGSKPLYVSLAQRR 407
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 41/254 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNE---QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS ++E Q +NL + + +TQEE + LF+ G V S
Sbjct: 197 LLNDKKVYVGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTSA- 255
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKRA- 113
+++ +S G+GFVNY E+A+ A+ L+ L+ K + V+ A+ + E ++R+
Sbjct: 256 IVQVDDEGRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAEREEELRRSY 315
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLYV L + + L F P+GTI + +++ D+ S
Sbjct: 316 EQAKMEKLSKYQGVNLYVKNLEDDVDDDKLRAEFEPFGTITSCKVMSDEKGS-------- 367
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV F+ EA A+ E+N + S+P+ V A R + L +
Sbjct: 368 --------SKGFGFVCFSSPDEATKAIAEMNNKM--IGSKPLYVSLAQRREVRRQQLESQ 417
Query: 220 LNAQAAAMRHFAAA 233
+ AQ +R AA
Sbjct: 418 I-AQRNQIRMQQAA 430
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+T+ + +F+ +G V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 44 SASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERAL 103
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + + L + F +G +++ +
Sbjct: 104 EQLNYSLIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCK 163
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D+ SKG GFV + AE A++ +NG +
Sbjct: 164 VATDEQGR----------------SKGYGFVHYETAEAAETAIKAVNGML 197
>gi|412993650|emb|CCO14161.1| predicted protein [Bathycoccus prasinos]
Length = 499
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 95/345 (27%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
++SNL V +P+ M + +L LF G VESC ++RD T QS GYGFV Y + EDA A
Sbjct: 94 KHSNLYVWSIPRDMDERQLSTLFQKFGTVESCTIMRDVQTKQSKGYGFVKYVKFEDAVNA 153
Query: 85 IIELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQ 126
+L+G +++K +++ +A S +I N+YV GLP + +
Sbjct: 154 KEKLHGKFVKDKQLQIKFASTDSNGLMGVHGGMIGATGVDVASIPTDNVYVKGLPLDIDE 213
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
L F +G I++ R++ +RF EAE A+
Sbjct: 214 GILREKFGAFGKIVSCRVIAT-----------------------TALIRFETVGEAEVAV 250
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+E NG K S G A ++ + NA+ M P H +
Sbjct: 251 REANG------------KMIVSEIGGAMPVSVSFNAKQQIMASL---------PTHSN-- 287
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
++V+N+ + E+ L LF G V++V ++RD
Sbjct: 288 ---------------------------LYVWNIPRDMEEGSLKHLFEECGEVESVNIMRD 320
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRL----LQVSF 347
+ KG+GFV Y+EA AI+ ++G L + L LQV F
Sbjct: 321 KMSQVSKGYGFVKFIRYEEAEKAIEKVSGRVLREDLAHRPLQVKF 365
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 63/214 (29%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
SNL V +P+ M + L+HLF GEVES ++RDK + S GYGFV + R E+AE+AI
Sbjct: 286 SNLYVWNIPRDMEEGSLKHLFEECGEVESVNIMRDKMSQVSKGYGFVKFIRYEEAEKAIE 345
Query: 87 ELNGLKLQ----NKSIKVSYA-------------------------------RPSSEAIK 111
+++G L+ ++ ++V +A P SE
Sbjct: 346 KVSGRVLREDLAHRPLQVKFANTDSSGVAGSSGRGGGEAGGGGGGVGGSAMTNPPSE--- 402
Query: 112 RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
N+Y+ GLP + DL N F +G II+ C ++A+
Sbjct: 403 --NIYIKGLPTDSNENDLVNAFAQFGRIIS----CTRIAT-------------------T 437
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
G + F EA A+Q NGT G S P+ V F
Sbjct: 438 GIIGFQSVEEASRAVQGANGTTLLGGSVPLMVTF 471
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + + L F++ G V SCK+ D+ +S GYGFV+Y E AE AI
Sbjct: 132 GNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETGEAAETAIK 190
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L +K + V Y E + NLY+ L +TQ++ E +F+ YG
Sbjct: 191 AVNGMLLNDKKVYVGYHISRKERQSKLDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGN 250
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ ++ + D+ + SKG GFV + H EA+ A+ L+ T G
Sbjct: 251 VTSAIVQVDEEGN----------------SKGFGFVNYEHHEEAQSAVDALHDTDIRGKK 294
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L R + A + ++++
Sbjct: 295 --LFVSRAQKKAEREEEL----------RRSYEQAK------MEKLSKYQ---------- 326
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +++ NL + +D L F PFG + + KV+RD ++ KGFGFV
Sbjct: 327 ------------GVNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKS-TSKGFGFV 373
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ DEA A+ +N +G + L VS +
Sbjct: 374 CFSSPDEATKAVAEMNNKMIGSKPLYVSLAQRR 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY T D ERA+ +L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 89 NGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
N ++N++ ++ +++ P+ + N+++ L + + + L + F +G +++ ++
Sbjct: 106 NYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D+ SKG GFV + AE A++ +NG +
Sbjct: 166 DEHGR----------------SKGYGFVHYETGEAAETAIKAVNGML 196
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
Y+ ++ R + ++ Q +NL + + ++TQ+E + +F G V S +++ S
Sbjct: 206 YHISRKERQSKLDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTSA-IVQVDEEGNS 264
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---AIKRA----------- 113
G+GFVNY E+A+ A+ L+ ++ K + VS A+ +E ++R+
Sbjct: 265 KGFGFVNYEHHEEAQSAVDALHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSK 324
Query: 114 ----NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
NLY+ L + E L F P+GTI + +++ D ++ SK
Sbjct: 325 YQGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKST----------------SK 368
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH 229
G GFV F+ EA A+ E+N + S+P+ V A R + L + + AQ +R
Sbjct: 369 GFGFVCFSSPDEATKAVAEMNNKMI--GSKPLYVSLAQRREVRRQQLESQI-AQRNQIRM 425
Query: 230 FAAAMR-----HFGNPLHH-SARFKFAPLTADLLN---NSMLPPKSLHGSG 271
AA + P+++ F P +++ MLPP+ + +G
Sbjct: 426 QQAAAAGIPGGYINGPMYYPPGPGSFPPQGRNMMGYGQPGMLPPRPRYPAG 476
>gi|195328687|ref|XP_002031046.1| GM24242 [Drosophila sechellia]
gi|194119989|gb|EDW42032.1| GM24242 [Drosophila sechellia]
Length = 244
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+NLI+NY+PQ MT+ EL LFS GE+ K+IR + T S YGFV++ A
Sbjct: 38 RDKTNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTGISCCYGFVDFVSERQAAA 97
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
A+ LNG + + K +KV++ARPS + NLYV+ LP +M ++ + LF P+G I+
Sbjct: 98 AVNNLNGYETRGKRLKVAFARPSE--YENTNLYVANLPTYMDEKKIRELFAPFGNILDVT 155
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+L + ++ +G+ F+ F +AE A ++ + +GA P+ V
Sbjct: 156 LLRHRFNNK---------------FRGVAFLDFELVRDAEEAKYGMDRHMIKGAFRPLKV 200
Query: 204 KF 205
KF
Sbjct: 201 KF 202
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 263 PPKSLHGSGWCIFVYNLAP-ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
PP + N P + ++ L +LF +G ++ KV+R T +GFV
Sbjct: 31 PPSRTEVRDKTNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTGISCCYGFVDFV 90
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSF 347
+ +A A+ +LNGY + L+V+F
Sbjct: 91 SERQAAAAVNNLNGYETRGKRLKVAF 116
>gi|66800163|ref|XP_629007.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996426|sp|Q54BM2.1|PAP1A_DICDI RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein, cytoplasmic 1-A
gi|60462370|gb|EAL60591.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 565
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 163/379 (43%), Gaps = 73/379 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+S+L V + ++++ L +F+ VG V + ++ RD T +SL Y +VNYY DAERA+
Sbjct: 9 SSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERAL 68
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ K+ ++ +++ PS N+++ L K + + L + F +G I++ +
Sbjct: 69 DTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCK 128
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA------ 197
++ D S SKG GFV + A+ A+ ++NG + G
Sbjct: 129 VVTDDGNS----------------SKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGP 172
Query: 198 -------SEPITVKFAN--------------------------------SPAGRAKALA- 217
+P VKF N G++K
Sbjct: 173 FKSSKERGQPTEVKFTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGF 232
Query: 218 ANLNAQAAA---MRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
AN + AA + + + H G P++ K A+L + G +
Sbjct: 233 ANFESAEAAKNVVENENGKIFH-GKPIYAGRAQKKIEREAELKHTF-----ETKYQGVNL 286
Query: 275 FVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
++ N+ +++ L ++F FG + + V++D + KGFGFVC T DEA A+ +N
Sbjct: 287 YIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMN 346
Query: 335 GYALGDRLLQVSFKTHKPL 353
G +G + L V+ K +
Sbjct: 347 GRMIGTKPLYVALAQRKDI 365
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 44/260 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + ++L+ L GE+ + ++ D +S G+GF N+ E A+ +
Sbjct: 188 TNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDK-GKSKGFGFANFESAEAAKNVVE 246
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------------ANLYVSGLPKHMTQEDLENL 132
NG K I YA + + I+R NLY+ + + + L +
Sbjct: 247 NENGKIFHGKPI---YAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREV 303
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F +GTI ++ ++ D A+ SKG GFV + EA A+ E+NG
Sbjct: 304 FSQFGTITSAIVMKDDKAT---------------TSKGFGFVCYTAPDEATRAVTEMNGR 348
Query: 193 IPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKF--A 250
+ ++P+ V A R A L Q + F +R P + S F A
Sbjct: 349 MI--GTKPLYVALAQ----RKDIRRAQLEMQ--HQQKFKTGIRQQMPPTYGSGPVFFTPA 400
Query: 251 PLTADLLNNSMLP-PKSLHG 269
P+ ++ M+P P++ +G
Sbjct: 401 PVNPQVVYQQMMPRPRNWNG 420
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ ++L+ +FS G + S +++D S G+GFV Y ++A RA
Sbjct: 282 QGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRA 341
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + K + V+ A+ + I+RA L
Sbjct: 342 VTEMNGRMIGTKPLYVALAQ--RKDIRRAQL 370
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 144/335 (42%), Gaps = 71/335 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + + FS+ G + SCK+ D+ A S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDKTIDNKAIYDTFSAFGNILSCKVATDEK-ANSKGYGFVHFETEEAANTSIDK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L+ F PYG I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ ++ M+ E+ + SKG GFV F AE A+Q LNG + EG S
Sbjct: 210 TSYKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L + KF L
Sbjct: 254 --LYVARAQKKAERQQEL-----------------------------KRKFEELK----- 277
Query: 259 NSMLPPKSLHGS--GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
K H S G ++V NL +D L + F P+G + + KV+ D + + KGFG
Sbjct: 278 ------KKRHDSAFGVNLYVKNLDDSIDDERLCKEFSPYGTITSAKVMTDEEG-RSKGFG 330
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FVC + +EA A+ LNG +G + L V+ K
Sbjct: 331 FVCFISANEATCAVTELNGRVVGSKPLYVALAQRK 365
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q + + L FSS G V S ++ RD + +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+NK I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 62 TMNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ A+ SKG GFV F A ++ ++NG +
Sbjct: 122 ATDEKAN----------------SKGYGFVHFETEEAANTSIDKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + +D L + F P+G + + KV+ + K KGFGFV +
Sbjct: 185 ---------VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTE 234
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q+LNG +G+
Sbjct: 235 AAEAAVQALNGKDMGE 250
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + E
Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHDSAFGVNLYVKNLDDSIDDE 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYGTI +++++ D+ SKG GFV F EA A+
Sbjct: 302 RLCKEFSPYGTITSAKVMTDEEGR----------------SKGFGFVCFISANEATCAVT 345
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
ELNG + S+P+ V A R LA+ MR
Sbjct: 346 ELNGRVV--GSKPLYVALAQRKEERKAHLASQYMRHMTGMR 384
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 145/333 (43%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + + FS+ G + SCK+ +D+T A S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFETEEAANKSIEK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + + E L +F YG I
Sbjct: 159 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGRI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ + S S+G GFV F AE A ELNG + EG
Sbjct: 219 TSHKVMYKEDGS----------------SRGFGFVAFEDPDAAERACMELNGKELVEG-- 260
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A A R K L + KF L ++ L
Sbjct: 261 KPLYVGRAQKKAERQKEL-----------------------------KRKFEQLKSERLT 291
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 292 RY---------QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFV 340
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 341 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 373
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS+ G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALE 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 71 GMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A +++++NG +
Sbjct: 131 AQDETGA----------------SKGYGFVHFETEEAANKSIEKVNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + F + R K A L N
Sbjct: 164 ---------------LNGKKVYVGRF----------IPRKEREKELGEKAKLFTN----- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + D +L ++F +G + + KV+ + +GFGFV + D
Sbjct: 194 ---------VYVKNFGEDFSDEMLREMFEKYGRITSHKVMYK-EDGSSRGFGFVAFEDPD 243
Query: 325 EAVFAIQSLNGYAL 338
A A LNG L
Sbjct: 244 AAERACMELNGKEL 257
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + E L+ +F G + S K++ K S G+GFV + + AERA +
Sbjct: 192 TNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMY-KEDGSSRGFGFVAFEDPDAAERACM 250
Query: 87 ELNGLKL----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQE 127
ELNG +L + K +K + + SE + R NLYV L + E
Sbjct: 251 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ E+ R SKG GFV F+ EA A+
Sbjct: 311 RLRKEFAPFGTITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVT 353
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I ++P+ V A R L + + A+MR
Sbjct: 354 EMNGRIV--GTKPLYVALAQRKEDRKAHLTSQYMQRMASMR 392
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 141/311 (45%), Gaps = 71/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L +F+ VG+V S ++ RD +T +SLGYG+VNY +DA RA+
Sbjct: 12 TSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 71
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L NK I++ Y+ PS AN+++ L K + + L + F +G I++ ++
Sbjct: 72 VLNFTPLNNKPIRIMYSHRDPSIRKSGMANIFIKNLDKGIDHKALHDTFSSFGNILSCKV 131
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D SG SKG GFV+F+ A++A+ +LNG +
Sbjct: 132 ATD----------ASGQ------SKGYGFVQFDSEEAAQNAIDKLNGML----------- 164
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
+N + + HF G +S +F NN
Sbjct: 165 ---------------VNDKQVYVGHFLRKQDRDG--ALYSIKF----------NN----- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+FV NLA T D L +F GA+ + V+RD K K FGFV + D
Sbjct: 193 ---------VFVKNLAESTTDEELKNIFAEHGAITSAVVMRDADG-KSKCFGFVNFESAD 242
Query: 325 EAVFAIQSLNG 335
+A A+++LNG
Sbjct: 243 DAAKAVEALNG 253
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 140/331 (42%), Gaps = 64/331 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + + + L FSS G + SCK+ D + QS GYGFV + E A+ AI
Sbjct: 100 ANIFIKNLDKGIDHKALHDTFSSFGNILSCKVATD-ASGQSKGYGFVQFDSEEAAQNAID 158
Query: 87 ELNGLKLQNKSIKVSYARPSSE------AIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
+LNG+ + +K + V + + +IK N++V L + T E+L+N+F +G I
Sbjct: 159 KLNGMLVNDKQVYVGHFLRKQDRDGALYSIKFNNVFVKNLAESTTDEELKNIFAEHGAIT 218
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
++ ++ D SK GFV F +A A++ LNG +G E
Sbjct: 219 SAVVMRDADGK----------------SKCFGFVNFESADDAAKAVEALNGKKIDG--EE 260
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
V A + R L F +M+ T D
Sbjct: 261 WYVGKAQKKSERELELKG----------RFEQSMKE----------------TVDKFQ-- 292
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
G +++ NL D L +LF FGA+ + KV+RDP +G GFV
Sbjct: 293 ----------GLNLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGI-SRGSGFVAF 341
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG L + L V+ K
Sbjct: 342 STPEEASRALAEMNGKMLISKPLYVALAQRK 372
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 41/225 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T EEL+++F+ G + S ++RD +S +GFVN+ +DA +A+
Sbjct: 191 NNVFVKNLAESTTDEELKNIFAEHGAITSAVVMRD-ADGKSKCFGFVNFESADDAAKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG K+ + V A+ SE + NLY+ L + E
Sbjct: 250 ALNGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKNLDDSINDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF +G I + +++ D SG IS+G GFV F+ EA A+ E
Sbjct: 310 LKELFSDFGAITSCKVMRDP----------SG------ISRGSGFVAFSTPEEASRALAE 353
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG + S+P+ V A R + A L AQ + MR A
Sbjct: 354 MNGKML--ISKPLYVALAQ----RKEERRARLQAQFSQMRPVTMA 392
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ E+L+ LFS G + SCK++RD + S G GFV + E+A RA
Sbjct: 292 QGLNLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGI-SRGSGFVAFSTPEEASRA 350
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG L +K + V+ A+ E +RA L
Sbjct: 351 LAEMNGKMLISKPLYVALAQRKEE--RRARL 379
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ SG IF+ NL + L F FG + + KV D + + KG+GFV + +
Sbjct: 93 SIRKSGMANIFIKNLDKGIDHKALHDTFSSFGNILSCKVATD-ASGQSKGYGFVQFDSEE 151
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
A AI LNG + D+ + V
Sbjct: 152 AAQNAIDKLNGMLVNDKQVYV 172
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 142/333 (42%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D++ A S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGA-SKGYGFVHFETEEAANKSIDK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + MT + L+ +F YGTI
Sbjct: 159 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ S+G GFV F AE A+ ELNG I EG
Sbjct: 219 TSHKVMSKDDGK----------------SRGFGFVAFEDPDAAEQAVLELNGKDISEGKC 262
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ A + KF L + LN
Sbjct: 263 MYV---------GRAQKKAER----------------------QQELKRKFEQLKIERLN 291
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 292 RY---------QGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME--EGRSKGFGFV 340
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + +EA A+ +NG +G + L V+ K
Sbjct: 341 CFSQPEEATKAVTEMNGRIVGSKPLYVALAQRK 373
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 130/311 (41%), Gaps = 69/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K++ + + + F +G I++ ++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A ++ ++NG +
Sbjct: 131 AQDESGA----------------SKGYGFVHFETEEAANKSIDKVNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 164 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + D+ L ++F +G + + KV+ K +GFGFV + D
Sbjct: 194 ---------VYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDG-KSRGFGFVAFEDPD 243
Query: 325 EAVFAIQSLNG 335
A A+ LNG
Sbjct: 244 AAEQAVLELNG 254
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 39/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + MT ++L+ +F G + S K++ K +S G+GFV + + AE+A++
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-SKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
ELNG + + K + V A+ +E +KR NLYV L + E
Sbjct: 251 ELNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDE 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ ++ SKG GFV F+Q EA A+
Sbjct: 311 RLRKEFTPFGTITSAKVMMEEGR-----------------SKGFGFVCFSQPEEATKAVT 353
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I S+P+ V A R LA+ + A +R
Sbjct: 354 EMNGRIV--GSKPLYVALAQRKEDRKAHLASQYMQRMANVR 392
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + T+ E L+ F+ G + S K++ ++ +S G+GFV + + E+A +A
Sbjct: 294 QGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQPEEATKA 351
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG + +K + V+ A+
Sbjct: 352 VTEMNGRIVGSKPLYVALAQ 371
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSIRVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGRQV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + KF + D +
Sbjct: 262 YV---------GRAQKKGERQN----------------------ELKRKFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A R F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAREFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +++V+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L R + V
Sbjct: 243 DAQKAVDEMNGKELNGRQVYV 263
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ LFS G S +++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L + + V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A +R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMATVR 390
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M + L+++F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D EN +S +G GFV F +H +A+ A+ E+NG E +
Sbjct: 218 MSIRVMTD----ENGKS------------RGFGFVSFERHEDAQRAVDEMNGK--EMNGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 260 LIYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ D + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMD--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D+ L +F +G +++V+ D + K +GFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + +L+ V
Sbjct: 243 DAQRAVDEMNGKEMNGKLIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M ++L+ +FS G S +++ D+ +S G+GFV++ R EDA+RA+
Sbjct: 191 TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDEN-GKSRGFGFVSFERHEDAQRAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ D G SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMMD-----------GGR------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 62/330 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + ++ + L+ F++ G V SCK+ D + QS GYGFV + E AE +I
Sbjct: 123 ANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVD-SNGQSKGYGFVQFESEESAEISIE 181
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR-----ANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+LNG+ L +K + V + E I+ N+YV LP+ T +DL+NLF P+GTI +
Sbjct: 182 KLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITS 241
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SK GFV F A A+++L+GT+ G + +
Sbjct: 242 AIVMTDSNGK----------------SKCFGFVNFQNTDSAAAAVEKLDGTV-LGDDKTL 284
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
V A A R L A + +RF
Sbjct: 285 YVGRAQRKAEREAELKAKFEQE-------------------RKSRF-------------- 311
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+ L G+ +++ NL +D L +LF +G + + KV+ D Q KG GFV +
Sbjct: 312 ---EKLQGAN--LYIKNLDDHIDDEKLKELFSEYGTITSCKVMLD-QHGLSKGSGFVAFS 365
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ DEA A+ +NG G + L V+ K
Sbjct: 366 SPDEATKALNEMNGKMKGRKPLYVAVAQRK 395
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 136/318 (42%), Gaps = 74/318 (23%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+S+L V + Q++ + +L LF V +V S ++ RD+T QSLGY +VN+ +DA A+
Sbjct: 34 SSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAM 93
Query: 86 IELNGLKLQNKSIK--VSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN + K I+ +S PS AN+++ L + + L + F +GT+++ +
Sbjct: 94 EHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKALRDTFAAFGTVLSCK 153
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D SKG GFV+F AE ++++LNG +
Sbjct: 154 VAVDSNGQ----------------SKGYGFVQFESEESAEISIEKLNGML---------- 187
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + HF + H R +
Sbjct: 188 ----------------LNDKQVYVGHF----------IRHQERIR--------------- 206
Query: 264 PKSLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
+GS + ++V NL T D+ L LF P G + + V+ D K K FGFV N
Sbjct: 207 ---ANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTD-SNGKSKCFGFVNFQN 262
Query: 323 YDEAVFAIQSLNGYALGD 340
D A A++ L+G LGD
Sbjct: 263 TDSAAAAVEKLDGTVLGD 280
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 42/223 (18%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q +N+ V +P+T T ++L++LF+ G + S ++ D + +S +GFVN+ T+ A A
Sbjct: 211 QFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTD-SNGKSKCFGFVNFQNTDSAAAA 269
Query: 85 IIELNGLKL-QNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMT 125
+ +L+G L +K++ V A+ +E ++ ANLY+ L H+
Sbjct: 270 VEKLDGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQGANLYIKNLDDHID 329
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
E L+ LF YGTI + +++ D+ +SKG GFV F+ EA A
Sbjct: 330 DEKLKELFSEYGTITSCKVMLDQHG----------------LSKGSGFVAFSSPDEATKA 373
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+ E+NG + +P+ V A R + A L AQ A +R
Sbjct: 374 LNEMNGKMK--GRKPLYVAVAQ----RKEERKARLQAQFAQIR 410
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ SG+ +F+ NL ++ L F FG V + KV D + KG+GFV + +
Sbjct: 116 SIRKSGYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVD-SNGQSKGYGFVQFESEE 174
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
A +I+ LNG L D+ + V
Sbjct: 175 SAEISIEKLNGMLLNDKQVYV 195
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 72/337 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+ +S GYGFV+Y E AE AI
Sbjct: 133 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAAETAIKA 191
Query: 88 LNGLKLQNKSIKVSY--ARPSSEAIKRA----------NLYVSGLPKHMTQEDLENLFRP 135
+NG+ L +K + V + +R +S +++ N+YV L +TQ+D LF
Sbjct: 192 VNGMLLNDKKVYVGHHISRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQ 251
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
+G + ++ I D+ S+G GFV F H EA+ A++ L+ + E
Sbjct: 252 FGNVTSAVIQTDEQGQ----------------SRGFGFVNFETHEEAQKAVETLHDS--E 293
Query: 196 GASEPITVKFANSPAGRAKALAANL-NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTA 254
+ V A A R + L + A+ M +
Sbjct: 294 YHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKY------------------------ 329
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
G +++ NL + +D L Q F PFG++ + KV+RD + KG
Sbjct: 330 ---------------QGVNLYIKNLEDDIDDERLRQEFEPFGSITSAKVMRD-EKGTSKG 373
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGFVC ++ DEA A+ +N +G + L VS +
Sbjct: 374 FGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQRR 410
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 139/329 (42%), Gaps = 67/329 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 43 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 102
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ ++ ++ +++ P+ + N+++ L + + + L + F +G +++ +
Sbjct: 103 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 162
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ SKG GFV + AE A++ +NG +
Sbjct: 163 VATDEHGR----------------SKGYGFVHYETAEAAETAIKAVNGML---------- 196
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR-FKFAPLTADLLNNSML 262
LN + + H H R K + A N
Sbjct: 197 ----------------LNDKKVYVGH------HISRKASSRERQSKLEEMKAQFTN---- 230
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
I+V NL PE + +LF FG V + + D Q + +GFGFV
Sbjct: 231 -----------IYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQG-QSRGFGFVNFET 278
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++EA A+++L+ R L VS K
Sbjct: 279 HEEAQKAVETLHDSEYHGRKLFVSRAQKK 307
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 38/238 (15%)
Query: 14 HRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFV 73
R + ++ Q +N+ V + +TQ++ LF G V S +I+ QS G+GFV
Sbjct: 216 ERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSA-VIQTDEQGQSRGFGFV 274
Query: 74 NYYRTEDAERAI-----IELNGLKL----------QNKSIKVSYARPSSEAIKR---ANL 115
N+ E+A++A+ E +G KL + + ++ SY + E + + NL
Sbjct: 275 NFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNL 334
Query: 116 YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVR 175
Y+ L + E L F P+G+I +++++ D+ + SKG GFV
Sbjct: 335 YIKNLEDDIDDERLRQEFEPFGSITSAKVMRDEKGT----------------SKGFGFVC 378
Query: 176 FNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
F+ EA A+ E+N + S+P+ V A R + L + + AQ +R AA
Sbjct: 379 FSSPDEATKAVAEMNNKMI--GSKPLYVSLAQRREVRRQQLESQI-AQRNQIRMQQAA 433
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 72/317 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L +F+ VG+V S ++ RD TT +SLGYG+VNY +DA RA+
Sbjct: 37 TSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALD 96
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN NK I++ Y+ PS N+++ L K + + L + F +G I++ ++
Sbjct: 97 ILNFTPFNNKPIRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKV 156
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D SG S+G GFV+F+ A++A+ +LNG +
Sbjct: 157 ATDS----------SGQ------SRGYGFVQFDNEEAAQNAIDKLNGML----------- 189
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF +R + +F NN
Sbjct: 190 ---------------LNDKQVYVGHF---LRKHERDSASNKKF----------NN----- 216
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL+ T + L +FG +G + + ++RD K K FGFV N D
Sbjct: 217 ---------VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADG-KSKCFGFVNFENTD 266
Query: 325 EAVFAIQSLNGYALGDR 341
A A++SLNG + D+
Sbjct: 267 AAAKAVESLNGKKIDDK 283
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 41/229 (17%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N++ +N+ V + ++ T+E+L+++F GE+ S ++RD +S +GFVN+ T+ A
Sbjct: 211 NKKFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRD-ADGKSKCFGFVNFENTDAAA 269
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSE-----------AIKRA-------NLYVSGLPKHM 124
+A+ LNG K+ +K V A+ SE ++K A NLY+ L +
Sbjct: 270 KAVESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLDDSI 329
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+ E+L+ LF +G I + +++ D SG IS+G GFV F+ EA
Sbjct: 330 SDENLKELFSDFGMITSCKVMRDP----------SG------ISRGSGFVAFSTPEEASR 373
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
A+ E+NG + S+P+ V A R + A L AQ + MR A A
Sbjct: 374 ALAEMNGKMV--VSKPLYVALAQ----RKEERRARLQAQFSQMRPVAMA 416
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 6 EMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA 65
E+ +Q +S ++ Q NL + + +++ E L+ LFS G + SCK++RD +
Sbjct: 297 ELELKSQFEQSMKEAVDKYQGVNLYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGI 356
Query: 66 QSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
S G GFV + E+A RA+ E+NG + +K + V+ A+ E +RA L
Sbjct: 357 -SRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVALAQRKEE--RRARL 403
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
G +++ NL D L +LF FG + + KV+RDP +G GFV + +EA A+
Sbjct: 317 GVNLYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGI-SRGSGFVAFSTPEEASRAL 375
Query: 331 QSLNGYALGDRLLQVSFKTHK 351
+NG + + L V+ K
Sbjct: 376 AEMNGKMVVSKPLYVALAQRK 396
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ SG IF+ NL + L F FG + + KV D + + +G+GFV N +
Sbjct: 118 SIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATD-SSGQSRGYGFVQFDNEE 176
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
A AI LNG L D+ + V
Sbjct: 177 AAQNAIDKLNGMLLNDKQVYV 197
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 147/334 (44%), Gaps = 64/334 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + +T+ L FS G + SCK+ D+ A S G+GFV + E+A AI
Sbjct: 112 GNIFIKNLDKTVDTRTLHDTFSQFGNILSCKVSMDEH-ANSRGFGFVQFETAEEANEAIS 170
Query: 87 ELNGLKLQNKSIKVS-----YARPSSEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTII 140
++NG+ L++K + V R S+ +R N+YV P +++ +D F YG I
Sbjct: 171 KVNGMLLEDKRLFVGPFIPRGERESTNGERRFTNVYVKNFPDNVSDDDFRKSFERYGEIT 230
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ +I M E+ GT SK GFV F + +A+ +E+NG P G
Sbjct: 231 SCKI----MRKED------GT------SKCFGFVNFKEADDAKKCCEEMNGQKPFGGERD 274
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
I A + R + L + K+ + + L N+
Sbjct: 275 IYAGRAEKESERKEKL-----------------------------KKKYDQIRMERLKNN 305
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKC-KGFGFVC 319
L +++ NL +D L Q F FG + + KV+RD + KGFGFVC
Sbjct: 306 QL---------VNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVC 356
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
+EA A+ ++NG +G + + V+ H+P+
Sbjct: 357 FAQPEEATRAVTAMNGQMVGTKPIYVAL--HQPI 388
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + +T+ +L +FS VG V S ++ RD T +SLGY +VN++ DAERA+
Sbjct: 23 SASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERAL 82
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN +++ K+ ++ + PS N+++ L K + L + F +G I++ +
Sbjct: 83 DTLNYTQIKGKACRIMWKHRDPSIRKSGAGNIFIKNLDKTVDTRTLHDTFSQFGNILSCK 142
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
+ D+ A+ S+G GFV+F EA A+ ++NG + E
Sbjct: 143 VSMDEHAN----------------SRGFGFVQFETAEEANEAISKVNGMLLE 178
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ-SLGYGFVNYYRTEDA 81
N Q NL + + T+ E+L+ F G + S K++RDK + S G+GFV + + E+A
Sbjct: 304 NNQLVNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEA 363
Query: 82 ERAIIELNGLKLQNKSIKVSYARP 105
RA+ +NG + K I V+ +P
Sbjct: 364 TRAVTAMNGQMVGTKPIYVALHQP 387
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 62/330 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + ++ + L+ F++ G V SCK+ D + QS GYGFV + E AE +I
Sbjct: 123 ANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVD-SNGQSKGYGFVQFESEESAEISIE 181
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR-----ANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+LNG+ L +K + V + E I+ N+YV LP+ T +DL+NLF P+GTI +
Sbjct: 182 KLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITS 241
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SK GFV F A A+++L+GT+ G + +
Sbjct: 242 AIVMTDSNGK----------------SKCFGFVNFQNTDSAAAAVEKLDGTV-LGDDKTL 284
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
V A A R L A + +RF
Sbjct: 285 YVGRAQRKAEREAELRAKFEQE-------------------RKSRF-------------- 311
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+ L G+ +++ NL +D L +LF +G + + KV+ D Q KG GFV +
Sbjct: 312 ---EKLQGAN--LYIKNLDDHIDDEKLKELFSEYGTITSCKVMLD-QHGLSKGSGFVAFS 365
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ DEA A+ +NG G + L V+ K
Sbjct: 366 SPDEATKALNEMNGKMKGRKPLYVAVAQRK 395
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 136/318 (42%), Gaps = 74/318 (23%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+S+L V + Q++ + +L LF V +V S ++ RD+T QSLGY +VN+ +DA A+
Sbjct: 34 SSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAM 93
Query: 86 IELNGLKLQNKSIK--VSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN + K I+ +S PS AN+++ L + + L + F +GT+++ +
Sbjct: 94 EHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKALRDTFAAFGTVLSCK 153
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D SKG GFV+F AE ++++LNG +
Sbjct: 154 VAVDSNGQ----------------SKGYGFVQFESEESAEISIEKLNGML---------- 187
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + HF + H R +
Sbjct: 188 ----------------LNDKQVYVGHF----------IRHQERIR--------------- 206
Query: 264 PKSLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
+GS + ++V NL T D+ L LF P G + + V+ D K K FGFV N
Sbjct: 207 ---ANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTD-SNGKSKCFGFVNFQN 262
Query: 323 YDEAVFAIQSLNGYALGD 340
D A A++ L+G LGD
Sbjct: 263 TDSAAAAVEKLDGTVLGD 280
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 42/223 (18%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q +N+ V +P+T T ++L++LF+ G + S ++ D + +S +GFVN+ T+ A A
Sbjct: 211 QFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTD-SNGKSKCFGFVNFQNTDSAAAA 269
Query: 85 IIELNGLKL-QNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMT 125
+ +L+G L +K++ V A+ +E ++ ANLY+ L H+
Sbjct: 270 VEKLDGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNLDDHID 329
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
E L+ LF YGTI + +++ D+ +SKG GFV F+ EA A
Sbjct: 330 DEKLKELFSEYGTITSCKVMLDQHG----------------LSKGSGFVAFSSPDEATKA 373
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+ E+NG + +P+ V A R + A L AQ A +R
Sbjct: 374 LNEMNGKMK--GRKPLYVAVAQ----RKEERKARLQAQFAQIR 410
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ SG+ +F+ NL ++ L F FG V + KV D + KG+GFV + +
Sbjct: 116 SIRKSGYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVD-SNGQSKGYGFVQFESEE 174
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
A +I+ LNG L D+ + V
Sbjct: 175 SAEISIEKLNGMLLNDKQVYV 195
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 145/333 (43%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + + F++ G + SCK+ +D+T A S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDKTIDNKAMYDTFTAFGNILSCKVAQDETGA-SKGYGFVHFETEEAANKSIEK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + + E L +F YG I
Sbjct: 159 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGRI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ + S S+G GFV F AE A ELNG + EG
Sbjct: 219 TSHKVMYKEDGS----------------SRGFGFVAFEDPDAAERACMELNGKELVEG-- 260
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A A R K L + KF L ++ L
Sbjct: 261 KPLYVGRAQKKAERQKEL-----------------------------KRKFEQLKSERLT 291
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 292 RY---------QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFV 340
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 341 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 373
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS+ G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALE 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 71 GMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFTAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A +++++NG +
Sbjct: 131 AQDETGA----------------SKGYGFVHFETEEAANKSIEKVNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + F + R K A L N
Sbjct: 164 ---------------LNGKKVYVGRF----------IPRKEREKELGEKAKLFTN----- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + D +L ++F +G + + KV+ + +GFGFV + D
Sbjct: 194 ---------VYVKNFGEDFSDEMLREMFEKYGRITSHKVMYK-EDGSSRGFGFVAFEDPD 243
Query: 325 EAVFAIQSLNGYAL 338
A A LNG L
Sbjct: 244 AAERACMELNGKEL 257
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + E L+ +F G + S K++ K S G+GFV + + AERA +
Sbjct: 192 TNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMY-KEDGSSRGFGFVAFEDPDAAERACM 250
Query: 87 ELNGLKL----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQE 127
ELNG +L + K +K + + SE + R NLYV L + E
Sbjct: 251 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ E+ R SKG GFV F+ EA A+
Sbjct: 311 RLRKEFAPFGTITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVT 353
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I ++P+ V A R L + + A+MR
Sbjct: 354 EMNGRIV--GTKPLYVALAQRKEDRKAHLTSQYMQRMASMR 392
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 145/331 (43%), Gaps = 79/331 (23%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + ++ +L +FS VG V S ++ RD T SLGY +VN+ DA RA+
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME 101
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN + K I++ Y+ PSS AN+++ L K + + L + F +GTI++ ++
Sbjct: 102 MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKV 161
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
EI SKG GFV++ Q A++A+ ELNG +
Sbjct: 162 AT----------------EISGESKGYGFVQYEQDESAQNAINELNGML----------- 194
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRH---FGNPLHHSARFKFAPLTADLLNNSM 261
LN + + F FG+P KF NN
Sbjct: 195 ---------------LNDKKVYVGPFVRKQERENVFGSP-------KF--------NN-- 222
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR-DPQTYKCKGFGFVCM 320
++V NL+ T ++ L ++FG FG + +V VVR D +C FGFV
Sbjct: 223 ------------VYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRC--FGFVNF 268
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
N D+A A++ LNG L D+ L V K
Sbjct: 269 ENPDDAARAVEDLNGKKLDDKELYVGRAQKK 299
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 141/331 (42%), Gaps = 63/331 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +++ + L FS+ G + SCK + + + +S GYGFV Y + E A+ AI
Sbjct: 130 ANIFIKNLDKSIDNKALFDTFSAFGTILSCK-VATEISGESKGYGFVQYEQDESAQNAIN 188
Query: 87 ELNGLKLQNKSIKVS-YARPSSE-----AIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
ELNG+ L +K + V + R + K N+YV L + T+++L+ +F +G I
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEMFGKFGPIT 248
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ + R F GFV F +A A+++LNG + +
Sbjct: 249 S--VIVVRADDGKSRCF--------------GFVNFENPDDAARAVEDLNGKKLD--DKE 290
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
+ V A + R L K TAD +
Sbjct: 291 LYVGRAQKKSEREMQLKEKFE--------------------------KSNKETADKNQGT 324
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
L K+L GS +D L +LF FG + + KV+RD KG GFV
Sbjct: 325 NLYLKNLDGS-----------VDDDEKLKELFAEFGTITSCKVMRDSNGVN-KGSGFVAF 372
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ ++A A+ ++NG +G + L V+ K
Sbjct: 373 KSSEDASRALVAMNGKMVGSKPLYVALAQRK 403
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 42/216 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T++ L+ +F G + S ++R +S +GFVN+ +DA RA+
Sbjct: 221 NNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAARAVE 279
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHM-TQE 127
+LNG KL +K + V A+ SE + NLY+ L + E
Sbjct: 280 DLNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDE 339
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L+ LF +GTI + +++ D ++KG GFV F +A A+
Sbjct: 340 KLKELFAEFGTITSCKVMRDSNG----------------VNKGSGFVAFKSSEDASRALV 383
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQ 223
+NG + S+P+ V A R + A L AQ
Sbjct: 384 AMNGKMV--GSKPLYVALAQ----RKEERRARLQAQ 413
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 4 HEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEE-LQHLFSSVGEVESCKLIRDK 62
EM + +S ++ Q +NL + + ++ +E L+ LF+ G + SCK++RD
Sbjct: 301 EREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD- 359
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ + G GFV + +EDA RA++ +NG + +K + V+ A+ E +RA L
Sbjct: 360 SNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQRKEE--RRARL 410
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 142/333 (42%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D++ A S GYGFV++ E A ++I +
Sbjct: 122 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVTQDESGA-SKGYGFVHFETEEAANKSIEK 180
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + MT + L+ +F YGTI
Sbjct: 181 VNGMLLNGKKVYVGKFIPRKERQKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTI 240
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ S+G GFV F AE A+ +LNG I EG
Sbjct: 241 TSHKVMIKDDGK----------------SRGFGFVAFEDPNSAEQAVLDLNGKEIAEGKC 284
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ A + KF L + LN
Sbjct: 285 MYV---------GRAQKKAER----------------------QQELKRKFEQLKIERLN 313
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 314 RY---------QGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME--EGRSKGFGFV 362
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + +EA A+ +NG +G + L V+ K
Sbjct: 363 CFSQPEEATKAVTEMNGRIVGSKPLYVALAQRK 395
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 47/251 (18%)
Query: 15 RSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
R Q ++ E+ +N+ V + MT ++L+ +F G + S K++ K +S G+G
Sbjct: 199 RKERQKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFG 257
Query: 72 FVNYYRTEDAERAIIELNGLKL-QNKSIKVSYARPSSE---AIKR--------------- 112
FV + AE+A+++LNG ++ + K + V A+ +E +KR
Sbjct: 258 FVAFEDPNSAEQAVLDLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQG 317
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NLYV L + E L F P+GTI +++++ ++ SKG G
Sbjct: 318 VNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEEGR-----------------SKGFG 360
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
FV F+Q EA A+ E+NG I S+P+ V A R LA+ + A MR
Sbjct: 361 FVCFSQPEEATKAVTEMNGRIV--GSKPLYVALAQRKEDRKAHLASQYMQRMANMR---- 414
Query: 233 AMRHFGNPLHH 243
M+ G H
Sbjct: 415 -MQQMGQIFHQ 424
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 135/339 (39%), Gaps = 93/339 (27%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED------ 80
++L V + +T+ L FS+ G V S ++ RD T +SLGY +VN+ + D
Sbjct: 11 ASLYVGNLHTDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVVVGD 70
Query: 81 ----------------AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPK 122
AERA+ +N ++ + I++ +++ PS N+++ L K
Sbjct: 71 GGSGGGGCGSGSGSQRAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 130
Query: 123 HMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEA 182
++ + + + F +G I++ ++ D+ + SKG GFV F A
Sbjct: 131 NIDNKAMYDTFSAFGNILSCKVTQDESGA----------------SKGYGFVHFETEEAA 174
Query: 183 EHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLH 242
+++++NG + LN + + G +
Sbjct: 175 NKSIEKVNGML--------------------------LNGKKV----------YVGKFIP 198
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
R K A L N ++V N + D+ L ++F +G + + K
Sbjct: 199 RKERQKELGEKAKLFTN--------------VYVKNFGEDMTDDKLKEMFEKYGTITSHK 244
Query: 303 V-VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
V ++D K +GFGFV + + A A+ LNG + +
Sbjct: 245 VMIKD--DGKSRGFGFVAFEDPNSAEQAVLDLNGKEIAE 281
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 53 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 172
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 173 VAQDEFGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 206
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 207 ----------------LNEKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 236
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V NL PE + +LF +G + + + RD +T K +GFGFV N+
Sbjct: 237 ----------VYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNH 286
Query: 324 DEAVFAIQSLN 334
D A A++ LN
Sbjct: 287 DSAAAAVEDLN 297
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 111/277 (40%), Gaps = 58/277 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF GE+ S L RD T +S G+GFVN+ + A A+
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
+LN + + + + V A+ E +++A NLYV L + E
Sbjct: 295 DLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEK 354
Query: 129 LENLFRPYGTIITSRILCDKMAS----------------ENVRSFV------------SG 160
L +LF +G I ++R++ D + ENVR +
Sbjct: 355 LRDLFIGFGNITSARVMRDTIGDAGSESEKEKEASKDNKENVREETKKEAGGEDSAEKTD 414
Query: 161 TPEIPQI----------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
E P SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 415 KAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG--KPLYVALAQRKD 472
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
R L A++ A+ + AA P A +
Sbjct: 473 VRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 509
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 144 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 202
Query: 334 NGYALGDRLLQVS 346
NG L ++ + V
Sbjct: 203 NGMLLNEKKVFVG 215
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG S+G GFV F +H +A A++E+NGT G +
Sbjct: 218 LSVKVMTDS----------SGK------SRGFGFVSFEKHEDANKAVEEINGTELNGKTV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + QA R F +LL
Sbjct: 262 FV---------GRAQ---KKMERQAELKRKF------------------------ELLKQ 285
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 286 ERIS----RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E ED L ++F +G +VKV+ D + K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTD-SSGKSRGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 243 DANKAVEEINGTELNGKTVFV 263
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E+L+ +F G+ S K++ D ++ +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTD-SSGKSRGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K++ V A+ E +KR NLY+ L + E
Sbjct: 250 EINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I S+P+ V A R L + A MR
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMR 390
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 53 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 172
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 173 VAQDEFGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 206
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 207 ----------------LNEKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 236
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V NL PE + +LF +G + + + RD +T K +GFGFV N+
Sbjct: 237 ----------VYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNH 286
Query: 324 DEAVFAIQSLN 334
D A A++ LN
Sbjct: 287 DSAAAAVEDLN 297
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 58/277 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF GE+ S L RD T +S G+GFVN+ + A A+
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
+LN + + + + V A+ E +++A NLYV L + E
Sbjct: 295 DLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEK 354
Query: 129 LENLFRPYGTIITSRILCDKMAS----------------ENVRSFV------------SG 160
L +LF +G I ++R++ D ++ ENV+ +
Sbjct: 355 LRDLFIGFGNITSARVMRDTISDAGSESEKEKEASKDNKENVKEETKKEAGGEDSAEKTD 414
Query: 161 TPEIPQI----------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
E P SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 415 KAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG--KPLYVALAQRKD 472
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
R L A++ A+ + AA P A +
Sbjct: 473 VRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 509
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 144 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 202
Query: 334 NGYALGDRLLQVS 346
NG L ++ + V
Sbjct: 203 NGMLLNEKKVFVG 215
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 68/349 (19%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
+Q S +S V N+ + + +++ + L FS+ G + SCK++ D+ S GY
Sbjct: 87 SQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGY 144
Query: 71 GFVNYYRTEDAERAIIELNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPK 122
GFV++ E AERAI ++NG+ L + KS K A + A + N+Y+ +
Sbjct: 145 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGE 204
Query: 123 HMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEA 182
M E L++LF +G ++ +++ D+ SG SKG GFV F +H +A
Sbjct: 205 DMDDERLKDLFGKFGPALSVKVMTDE----------SGK------SKGFGFVSFERHEDA 248
Query: 183 EHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLH 242
+ A+ E+NG G I V A R L
Sbjct: 249 QKAVDEMNGKELNGKQ--IYVGRAQKKVERQTEL-------------------------- 280
Query: 243 HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
+ KF + D + G ++V NL +D L + F PFG + + K
Sbjct: 281 ---KRKFEQMKQDRITRY---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 328
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V+ + + KGFGFVC ++ +EA A+ +NG + + L V+ K
Sbjct: 329 VMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 375
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 74/325 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RDK T +SLGY +VNY + DA+RA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 70
Query: 87 ELNGLKLQNKSIKVSYA------RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
LN ++ + +++ ++ R S N+++ L K + + L + F +G I+
Sbjct: 71 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 130
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 131 SCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML------- 166
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
K ++ A + F N
Sbjct: 167 ---------LNDRKVFVGRFKSRKEREAELGARAKEFTN--------------------- 196
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 197 -------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSF 242
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 243 ERHEDAQKAVDEMNGKELNGKQIYV 267
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 195 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 253
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 254 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 313
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 314 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 356
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 357 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 394
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 72/249 (28%)
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
PS+ + A+LYV L +T+ L F P G I++ RI DK+ ++
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSL---------- 52
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN-SPAGRAKALAANLNAQ 223
G +V + Q ++A+ A++ LN + +G P+ + ++ P+ R + +
Sbjct: 53 -----GYAYVNYQQPVDAKRALETLNFDVIKG--RPVRIMWSQRDPSLRKSGVGGGV--- 102
Query: 224 AAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPET 283
GN IF+ NL
Sbjct: 103 --------------GN----------------------------------IFIKNLDKSI 114
Query: 284 EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLL 343
++ L+ F FG + + KVV D KG+GFV + A AI+ +NG L DR +
Sbjct: 115 DNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 172
Query: 344 QVS-FKTHK 351
V FK+ K
Sbjct: 173 FVGRFKSRK 181
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 53 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 172
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 173 VAQDEFGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 206
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 207 ----------------LNEKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 236
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V NL PE + +LF +G + + + RD +T K +GFGFV N+
Sbjct: 237 ----------VYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNH 286
Query: 324 DEAVFAIQSLN 334
D A A++ LN
Sbjct: 287 DSAAAAVEDLN 297
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 58/277 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF GE+ S L RD T +S G+GFVN+ + A A+
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
+LN + + + + V A+ E +++A NLYV L + E
Sbjct: 295 DLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEK 354
Query: 129 LENLFRPYGTIITSRILCDKMAS----------------ENVRSFV------------SG 160
L +LF +G I ++R++ D + ENV+ +
Sbjct: 355 LRDLFIGFGNITSARVMRDTIGDAGSESEKEKEASKDNKENVKEETKKEAGGEDSAEKTD 414
Query: 161 TPEIPQI----------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
E P SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 415 KAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG--KPLYVALAQRKD 472
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
R L A++ A+ + AA P A +
Sbjct: 473 VRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 509
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 144 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 202
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 203 NGMLLNEK 210
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 55 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 112
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + E A + N+Y+ + M E L++LF +G
Sbjct: 113 MNGMLLNDRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 172
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 173 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 215
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 216 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 245
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 246 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 294
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 295 FSSPEEATKAVTGMNGRIVATKPLYVALAQRK 326
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 146 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 204
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 205 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 264
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+
Sbjct: 265 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTG 307
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 308 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 345
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 72/285 (25%)
Query: 64 TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLP 121
T +SLGY +VN+ + DAERA+ +N ++ K +++ +++ P N+++ L
Sbjct: 3 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPPLRKSGVGNIFIKNLD 62
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIE 181
K + + L + F +G I++ +++CD+ SKG GFV F
Sbjct: 63 KSIDNKALYDTFSAFGNILSCKVVCDENG-----------------SKGYGFVHFETQEA 105
Query: 182 AEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA-MRHFGNP 240
AE A++++NG + + GR K+ A + F +++FG
Sbjct: 106 AERAIEKMNGML---------LNDRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGE- 155
Query: 241 LHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQN 300
D+ + + K L G FGP +
Sbjct: 156 --------------DMDDERL---KDLFGK---------------------FGP---ALS 174
Query: 301 VKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
VKV+ D ++ K KGFGFV +++A A+ +NG L + + V
Sbjct: 175 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 218
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
PP G G IF+ NL ++ L+ F FG + + KVV D KG+GFV
Sbjct: 46 PPLRKSGVG-NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFET 102
Query: 323 YDEAVFAIQSLNGYALGDRLLQVS-FKTHK 351
+ A AI+ +NG L DR + V FK+ K
Sbjct: 103 QEAAERAIEKMNGMLLNDRKVSVGRFKSRK 132
>gi|330798463|ref|XP_003287272.1| hypothetical protein DICPUDRAFT_151346 [Dictyostelium purpureum]
gi|325082732|gb|EGC36205.1| hypothetical protein DICPUDRAFT_151346 [Dictyostelium purpureum]
Length = 518
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 34/198 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL------------------ 68
+NLIVN +P++M EL++ F G +E+CK++ ++ Q +
Sbjct: 116 TNLIVNNIPRSMDSSELKNYFEKFGAIETCKVVYNRKKDQGISNNNNINNNINNNLNNSS 175
Query: 69 -GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
GYGFV + + EDA A+ ++NG ++ ++ IKVSYA+ SS ANLYV+ L H+T
Sbjct: 176 LGYGFVKFTKREDAFIAVEQMNGFEIDSRPIKVSYAQASSLQSNHANLYVNRLEPHVTNA 235
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
+L+ +F +G +I ++IL D P+ S+ +GFV F+Q EA A+
Sbjct: 236 NLKEIFSNFGEVIDTKILID--------------PDTGA-SRCVGFVHFSQRREALKALS 280
Query: 188 ELNGTIPEGASEPITVKF 205
+NG S PI VK+
Sbjct: 281 LMNGATIPYQSNPIYVKY 298
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 62/227 (27%)
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK--- 169
NL V+ +P+ M +L+N F +G I T +++ ++ + + + + I
Sbjct: 116 TNLIVNNIPRSMDSSELKNYFEKFGAIETCKVVYNRKKDQGISNNNNINNNINNNLNNSS 175
Query: 170 -GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
G GFV+F + +A A++++NG E S PI V + AQA+++
Sbjct: 176 LGYGFVKFTKREDAFIAVEQMNGF--EIDSRPIKVSY----------------AQASSL- 216
Query: 229 HFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVL 288
+S H + ++V L P + L
Sbjct: 217 ------------------------------------QSNHAN---LYVNRLEPHVTNANL 237
Query: 289 WQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
++F FG V + K++ DP T + GFV + EA+ A+ +NG
Sbjct: 238 KEIFSNFGEVIDTKILIDPDTGASRCVGFVHFSQRREALKALSLMNG 284
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 143/333 (42%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + Q + + L F++ G V SCK+ D + S GYGFV+Y E AE AI
Sbjct: 162 GNIFIKNLDQGIDNKALHDTFAAFGTVLSCKVATDDS-GLSKGYGFVHYDSNEAAEAAIK 220
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L +K + V E + NLYV L + +E+ E LF +G
Sbjct: 221 AVNGMLLNDKKVFVGQHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGP 280
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ I D+ + SKG GFV F H +A+ A++EL+ E
Sbjct: 281 ITSAVIQKDEEGN----------------SKGFGFVNFENHEDAQRAVEELDNK--EIHG 322
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A + R + L + A+++
Sbjct: 323 KPVFVGRAQKKSEREEELRKQ----------------------YEQAKYE---------- 350
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
K+ G +++ NL + +D L F PFG + + KV+RD + KGFGFV
Sbjct: 351 ------KAGKYQGSNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRD-EKGTSKGFGFV 403
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ DEA A+ +N +G + L V+ K
Sbjct: 404 CFSSPDEATRAMSEMNNKIVGTKPLYVALAQRK 436
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 40/239 (16%)
Query: 15 RSTYQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
R QS ++E S NL V + + +EE + LFS G + S + +D+ S G+G
Sbjct: 240 RKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDE-EGNSKGFG 298
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------------------AIKRA 113
FVN+ EDA+RA+ EL+ ++ K + V A+ SE + +
Sbjct: 299 FVNFENHEDAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGS 358
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
NLY+ L + E L F P+GTI + +++ D+ + SKG GF
Sbjct: 359 NLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDEKGT----------------SKGFGF 402
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
V F+ EA AM E+N I ++P+ V A R + L + + + +R AA
Sbjct: 403 VCFSSPDEATRAMSEMNNKIV--GTKPLYVALAQRKDVRKQQLESQIAQRNNQLRLAAA 459
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
+L V + +T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+ +
Sbjct: 75 SLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALDQ 134
Query: 88 LNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LN +++ K ++ +++ P + N+++ L + + + L + F +GT+++ ++
Sbjct: 135 LNYSQIRGKPCRIMWSQRDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLSCKVA 194
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D +SKG GFV ++ + AE A++ +NG +
Sbjct: 195 TDDSG----------------LSKGYGFVHYDSNEAAEAAIKAVNGML 226
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 3 KHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK 62
+ EE+ Q ++ Y+ Q SNL + + + E+L+ F G + SCK++RD+
Sbjct: 336 REEEL--RKQYEQAKYEKAGKYQGSNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDE 393
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR 104
S G+GFV + ++A RA+ E+N + K + V+ A+
Sbjct: 394 -KGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPLYVALAQ 434
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 87 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 144
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF YG
Sbjct: 145 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPA 204
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D SG SKG GFV F +H +A+ A+ ++NG G
Sbjct: 205 LSIRVMTDD----------SGK------SKGFGFVSFERHEDAQKAVDDMNGKELNGRQV 248
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + KF + D +
Sbjct: 249 YV---------GRAQKKGERQN----------------------ELKRKFEQMKQDRMTR 277
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 278 Y---------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 326
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 327 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 358
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 70/312 (22%)
Query: 36 QTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQN 95
QT+ + E Q FS G + S ++ RD T +SLGY +VN+ + DAERA+ +N ++
Sbjct: 7 QTLPKREAQQDFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKG 66
Query: 96 KSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASEN 153
+ +++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 67 RPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--- 123
Query: 154 VRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRA 213
SKG GFV F H AE A++++NG +
Sbjct: 124 --------------SKGYGFVHFETHEAAERAIEKMNGML----------------LNDR 153
Query: 214 KALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWC 273
K ++ A R F N
Sbjct: 154 KVFVGRFKSRKEREAELGARAREFTN---------------------------------- 179
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ N + +D L +LF +G +++V+ D + K KGFGFV +++A A+ +
Sbjct: 180 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQKAVDDM 238
Query: 334 NGYALGDRLLQV 345
NG L R + V
Sbjct: 239 NGKELNGRQVYV 250
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ LFS G S +++ D + +S G+GFV++ R EDA++A+
Sbjct: 178 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQKAVD 236
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L + + V A+ E +KR NLYV L + E
Sbjct: 237 DMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 296
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 297 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 339
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A +R
Sbjct: 340 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMATVR 377
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDS----------SGK------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKRKFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +NG +G + L V+ K
Sbjct: 340 FSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ D + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SSGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKDINGKMVFV 263
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LFS G+ S K++ D ++ +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SSGKSKGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPDEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRI--VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDPTGK----------------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R KF L + L+
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKR-------------------KFEQLKQERLSR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFGA+ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGAITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP T K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKDINGKMVFV 263
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LFS G+ S K++ D T +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGAITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 146
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 147 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 189
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 190 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 219
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 220 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 268
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 269 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 300
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 178
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 238
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 239 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 281
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 282 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 319
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 70/255 (27%)
Query: 93 LQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
++ K +++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 6 IKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG 65
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
SKG GFV F AE A++++NG +
Sbjct: 66 -----------------SKGYGFVHFETQEAAERAIEKMNGML----------------L 92
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGS 270
K ++ A + F N
Sbjct: 93 NDRKVFVGRFKSRKEREAELGARAKEFTN------------------------------- 121
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV +++A A+
Sbjct: 122 ---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAV 177
Query: 331 QSLNGYALGDRLLQV 345
+NG L + + V
Sbjct: 178 DEMNGKELNGKQIYV 192
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 146
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 147 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 189
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 190 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 219
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 220 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 268
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 269 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 300
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 178
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 238
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 239 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 281
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 282 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 319
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 70/255 (27%)
Query: 93 LQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
++ K +++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 6 IKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG 65
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
SKG GFV F AE A++++NG +
Sbjct: 66 -----------------SKGYGFVHFETQEAAERAIEKMNGML----------------L 92
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGS 270
K ++ A + F N
Sbjct: 93 NDRKVFVGRFKSRKEREAELGARAKEFTN------------------------------- 121
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV +++A A+
Sbjct: 122 ---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAV 177
Query: 331 QSLNGYALGDRLLQV 345
+NG L + + V
Sbjct: 178 DEMNGKELNGKQIYV 192
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 79/330 (23%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
+L V + ++ +L +FS VG V S ++ RD T SLGY +VN+ DA RA+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 88 LNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LN + K I++ Y+ PSS AN+++ L K + + L + F +G I++ ++
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 162
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
+ M+ E SKG GFV++ Q A++A+ ELNG +
Sbjct: 163 TE-MSGE---------------SKGYGFVQYEQDESAQNAINELNGML------------ 194
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRH---FGNPLHHSARFKFAPLTADLLNNSML 262
LN + + F FG+P KF NN
Sbjct: 195 --------------LNDKKVYVGPFVRKQERENVFGSP-------KF--------NN--- 222
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR-DPQTYKCKGFGFVCMT 321
++V NL+ T ++ L +LFG FG + +V VVR D +C FGFV
Sbjct: 223 -----------VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFE 269
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
N D+AV A++ LNG D+ L V K
Sbjct: 270 NPDDAVHAVEDLNGKKFDDKELYVGRAQKK 299
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 145/333 (43%), Gaps = 67/333 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +++ + L FS+ G + SCK + + + +S GYGFV Y + E A+ AI
Sbjct: 130 ANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDESAQNAIN 188
Query: 87 ELNGLKLQNKSIKVS-YARPSSE-----AIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
ELNG+ L +K + V + R + K N+YV L + T+++L+ LF +G I
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 248
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ + R F GFV F +A HA+++LNG
Sbjct: 249 S--VIVVRADDGKSRCF--------------GFVNFENPDDAVHAVEDLNGK-------- 284
Query: 201 ITVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
KF + GR AQ + R L S K TAD
Sbjct: 285 ---KFDDKELYVGR---------AQKKSEREMQ---------LKESFE-KSNKETADRNQ 322
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ L K+L GS +D L +LF FG + + KV+RD KG GFV
Sbjct: 323 GTNLYLKNLDGS-----------VDDDEKLKELFAEFGTITSCKVMRDSNGVN-KGSGFV 370
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ ++A A+ ++NG +G + L V+ K
Sbjct: 371 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 403
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 42/221 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T++ L+ LF + G + S ++R +S +GFVN+ +DA A+
Sbjct: 221 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVE 279
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHM-TQE 127
+LNG K +K + V A+ SE +K + NLY+ L + E
Sbjct: 280 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 339
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L+ LF +GTI + +++ D ++KG GFV F +A A+
Sbjct: 340 KLKELFAEFGTITSCKVMRDSNG----------------VNKGSGFVAFKSSEDATRALV 383
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + S+P+ V A R + A L AQ + MR
Sbjct: 384 AMNGKMV--GSKPLYVALAQ----RKEERRARLQAQFSQMR 418
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 4 HEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEE-LQHLFSSVGEVESCKLIRDK 62
EM +S ++ Q +NL + + ++ +E L+ LF+ G + SCK++RD
Sbjct: 301 EREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD- 359
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ + G GFV + +EDA RA++ +NG + +K + V+ A+ E +RA L
Sbjct: 360 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE--RRARL 410
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ M E L LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D EN + S+G GFV F +H +A+ A+ E+NG G
Sbjct: 218 MSIRVMTD----ENGK------------SRGFGFVSFERHEDAQKAVDEMNGKEMNGKLM 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q R KF + D +
Sbjct: 262 YV---------GRAQ---KKVERQTELKR-------------------KFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF +G +++V+ D + K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + +L+ V
Sbjct: 243 DAQKAVDEMNGKEMNGKLMYV 263
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E+L+ LFS G S +++ D+ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDEN-GKSRGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K + V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D SKG GFV F +H +A+ A+ ++NG G
Sbjct: 218 LSVRVMTDDTGK----------------SKGFGFVSFERHEDAQKAVDDMNGKELNGRQV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + KF + D +
Sbjct: 262 YV---------GRAQKKGERQN----------------------ELKRKFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A R F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAREFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG +G +V+V+ D T K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L R + V
Sbjct: 243 DAQKAVDDMNGKELNGRQVYV 263
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ LF + G S +++ D T +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A +R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMATVR 390
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ M E L LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D EN + S+G GFV F +H +A+ A+ E+NG G
Sbjct: 218 MSIRVMTD----ENGK------------SRGFGFVSFERHEDAQKAVDEMNGKEMNGKLM 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q R KF + D +
Sbjct: 262 YV---------GRAQ---KKVERQTELKR-------------------KFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF +G +++V+ D + K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + +L+ V
Sbjct: 243 DAQKAVDEMNGKEMNGKLMYV 263
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E+L+ LFS G S +++ D+ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDEN-GKSRGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K + V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 93
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 94 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 153
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 154 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 196
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 197 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 226
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 227 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 275
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 276 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 307
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 127 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 185
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 186 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 245
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 246 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 288
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 289 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 326
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 61 ILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----- 98
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 99 -----------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------- 128
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 129 ---------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFV 172
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 173 SFERHEDAQKAVDEMNGKELNGKQIYV 199
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D SG SKG GFV F +H +A+ A+ E+NG E +
Sbjct: 218 LSIRVMTDD----------SGK------SKGFGFVSFERHEDAQRAVDEMNGK--EMNGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A R L + KF + D +
Sbjct: 260 QVYVGRAQKKGERQTEL-----------------------------KRKFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAEMGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++F +G +++V+ D + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTD-DSGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + + + V
Sbjct: 243 DAQRAVDEMNGKEMNGKQVYV 263
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ +F G S +++ D + +S G+GFV++ R EDA+RA+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQRAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K + V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTSQYMQRMASVR 390
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 144/329 (43%), Gaps = 79/329 (24%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L V + ++ +L +FS VG V S ++ RD T SLGY +VN+ DA RA+ L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 89 NGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
N + K I++ Y+ PSS AN+++ L K + + L + F +G I++ ++
Sbjct: 104 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 163
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
+ M+ E SKG GFV++ Q A++A+ ELNG +
Sbjct: 164 E-MSGE---------------SKGYGFVQYEQDESAQNAINELNGML------------- 194
Query: 207 NSPAGRAKALAANLNAQAAAMRHFAAAMRH---FGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + F FG+P KF NN
Sbjct: 195 -------------LNDKKVYVGPFVRKQERENVFGSP-------KF--------NN---- 222
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR-DPQTYKCKGFGFVCMTN 322
++V NL+ T ++ L +LFG FG + +V VVR D +C FGFV N
Sbjct: 223 ----------VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFEN 270
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D+AV A++ LNG D+ L V K
Sbjct: 271 PDDAVHAVEDLNGKKFDDKELYVGRAQKK 299
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 145/333 (43%), Gaps = 67/333 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +++ + L FS+ G + SCK + + + +S GYGFV Y + E A+ AI
Sbjct: 130 ANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDESAQNAIN 188
Query: 87 ELNGLKLQNKSIKVS-YARPSSE-----AIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
ELNG+ L +K + V + R + K N+YV L + T+++L+ LF +G I
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 248
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ + R F GFV F +A HA+++LNG
Sbjct: 249 S--VIVVRADDGKSRCF--------------GFVNFENPDDAVHAVEDLNGK-------- 284
Query: 201 ITVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
KF + GR AQ + R L S K TAD
Sbjct: 285 ---KFDDKELYVGR---------AQKKSEREMQ---------LKESFE-KSNKETADRNQ 322
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ L K+L GS +D L +LF FG + + KV+RD KG GFV
Sbjct: 323 GTNLYLKNLDGS-----------VDDDEKLKELFAEFGTITSCKVMRDSNGVN-KGSGFV 370
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ ++A A+ ++NG +G + L V+ K
Sbjct: 371 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 403
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 42/221 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T++ L+ LF + G + S ++R +S +GFVN+ +DA A+
Sbjct: 221 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVE 279
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHM-TQE 127
+LNG K +K + V A+ SE +K + NLY+ L + E
Sbjct: 280 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 339
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L+ LF +GTI + +++ D ++KG GFV F +A A+
Sbjct: 340 KLKELFAEFGTITSCKVMRDSNG----------------VNKGSGFVAFKSSEDATRALV 383
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + S+P+ V A R + A L AQ + MR
Sbjct: 384 AMNGKMV--GSKPLYVALAQ----RKEERRARLQAQFSQMR 418
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 4 HEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEE-LQHLFSSVGEVESCKLIRDK 62
EM +S ++ Q +NL + + ++ +E L+ LF+ G + SCK++RD
Sbjct: 301 EREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD- 359
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ + G GFV + +EDA RA++ +NG + +K + V+ A+ E +RA L
Sbjct: 360 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE--RRARL 410
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 41 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 98
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 99 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 158
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 159 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 201
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 202 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 231
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 232 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 280
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 281 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 312
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 132 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 190
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 191 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 250
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 251 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 293
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 294 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 331
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 6 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 65
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 66 ILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----- 103
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 104 -----------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------- 133
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 134 ---------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFV 177
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 178 SFERHEDAQKAVDEMNGKELNGKQIYV 204
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 63 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 120
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 121 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 180
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 181 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 223
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 224 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 253
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 254 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 302
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 303 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 334
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 154 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 212
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 213 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 272
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 273 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 315
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 316 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 353
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 28 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 87
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 88 ILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----- 125
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 126 -----------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------- 155
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 156 ---------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFV 199
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 200 SFERHEDAQKAVDEMNGKELNGKQIYV 226
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 146/329 (44%), Gaps = 69/329 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + L FS+ G + SCK++ D+T S G+GFV+Y E AE+AI +
Sbjct: 97 NIFIKNLDKTVDHKALYDTFSAFGNILSCKVVTDETNT-SKGFGFVHYESQESAEKAIAK 155
Query: 88 LNGLKLQNKSI-----KVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+NG+ + N+ + K S R +++ +K N+++ L + ++++ L +L + +G I
Sbjct: 156 VNGMMINNQKVFVGPFKSSKERGATQEVKYTNVFIKNLSEDVSEQQLTDLLQAHGKITNL 215
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
I+ D+ SKG GF F A+ A++ NG + G I
Sbjct: 216 CIMTDEKGK----------------SKGFGFANFEHADAAKGAVENENGKMFSGKV--IY 257
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSML 262
V GRA+ L +A L H K+
Sbjct: 258 V-------GRAQ---KKLEREAE---------------LKHKFETKY------------- 279
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
G +++ NL + + L F +G + + KV+RD + KGFGFVC +
Sbjct: 280 -------QGVNLYIKNLDDSIDSDKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYST 332
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA A+ ++G +G + L V+F K
Sbjct: 333 PDEASKAVAEMHGRMVGSKPLYVAFAQRK 361
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+S+L V + +++ L +F+ VG V + ++ RD TT +SL Y ++NY+ + DAERA+
Sbjct: 7 SSSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERAL 66
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ K+ ++ +++ PS N+++ L K + + L + F +G I++ +
Sbjct: 67 DTLNNTPIKGKACRIMWSQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFGNILSCK 126
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
++ D+ + SKG GFV + AE A+ ++NG +
Sbjct: 127 VVTDETNT----------------SKGFGFVHYESQESAEKAIAKVNGMM 160
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + +++++L L + G++ + ++ D+ +S G+GF N+ + A+ A+
Sbjct: 186 TNVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDEK-GKSKGFGFANFEHADAAKGAVE 244
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRANLYVSGLPKHMTQEDLENLFRP 135
NG K I V A+ E + NLY+ L + + L F
Sbjct: 245 NENGKMFSGKVIYVGRAQKKLEREAELKHKFETKYQGVNLYIKNLDDSIDSDKLRATFSA 304
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
YGTI +S+++ D S SKG GFV ++ EA A+ E++G +
Sbjct: 305 YGTITSSKVMRDDKGSS---------------SKGFGFVCYSTPDEASKAVAEMHGRMV- 348
Query: 196 GASEPITVKFANSPAGRAKALAANLNAQ 223
S+P+ V FA R A L AQ
Sbjct: 349 -GSKPLYVAFAQ----RKDVRRAQLEAQ 371
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ ++L+ FS+ G + S K++RD + S G+GFV Y ++A +A
Sbjct: 280 QGVNLYIKNLDDSIDSDKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKA 339
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
+ E++G + +K + V++A+ + ++RA L ++ +++++ P G I
Sbjct: 340 VAEMHGRMVGSKPLYVAFAQ--RKDVRRAQLEAQHTKFKSSRMPVQSIYPPTGPIF 393
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 255 DLLNNSMLPPK-----------SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVK 302
D LNN+ + K SL SG IF+ NL + L+ F FG + + K
Sbjct: 67 DTLNNTPIKGKACRIMWSQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFGNILSCK 126
Query: 303 VVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS-FKTHK 351
VV D +T KGFGFV + + A AI +NG + ++ + V FK+ K
Sbjct: 127 VVTD-ETNTSKGFGFVHYESQESAEKAIAKVNGMMINNQKVFVGPFKSSK 175
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D SKG GFV F +H +A+ A+ ++NG G
Sbjct: 218 LSIRVMTDDGGK----------------SKGFGFVSFERHEDAQKAVDDMNGKELNGRQV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + KF + D +
Sbjct: 262 YV---------GRAQKKGERQN----------------------ELKRKFEQMKQDRMTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A R F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAREFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +++V+ D K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DGGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L R + V
Sbjct: 243 DAQKAVDDMNGKELNGRQVYV 263
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ LFS G S +++ D +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DGGKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A +R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMATVR 390
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 146 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 203
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 204 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 263
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 264 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 306
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 307 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 336
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 337 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 385
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 386 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 417
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 138/351 (39%), Gaps = 103/351 (29%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 88 LNGLKL-------------------------------QNKSIKVSYAR--PSSEAIKRAN 114
+NG+ L + K +++ +++ PS N
Sbjct: 87 MNGMLLNXXXXEASNIDSENVFPAAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN 146
Query: 115 LYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFV 174
+++ L K + + L + F +G I++ +++CD+ SKG GFV
Sbjct: 147 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-----------------SKGYGFV 189
Query: 175 RFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
F AE A++++NG + K ++ A
Sbjct: 190 HFETQEAAERAIEKMNGML----------------LNDRKVFVGRFKSRKEREAELGARA 233
Query: 235 RHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGP 294
+ F N +++ N + +D L LFG
Sbjct: 234 KEFTN----------------------------------VYIKNFGEDMDDERLKDLFGK 259
Query: 295 FGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
FG +VKV+ D ++ K KGFGFV +++A A+ +NG L + + V
Sbjct: 260 FGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 237 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 295
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 296 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 355
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 356 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 398
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 399 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 436
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 49/263 (18%)
Query: 93 LQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
++ K +++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 6 IKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG 65
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
SKG GFV F AE A++++NG +
Sbjct: 66 -----------------SKGYGFVHFETQEAAERAIEKMNGML----------------L 92
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGS 270
A+N++++ F AA R + F + S P SL S
Sbjct: 93 NXXXXEASNIDSENV----FPAAERAL-----DTMNFDVIKGKPVRIMWSQRDP-SLRKS 142
Query: 271 GWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
G IF+ NL ++ L+ F FG + + KVV D KG+GFV + A A
Sbjct: 143 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 200
Query: 330 IQSLNGYALGDRLLQVS-FKTHK 351
I+ +NG L DR + V FK+ K
Sbjct: 201 IEKMNGMLLNDRKVFVGRFKSRK 223
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 144/333 (43%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS+ G + SCK+ +D+ S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDEN-GTSKGYGFVHFETEEAANKSIEK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + +T+E L +F YG I
Sbjct: 159 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDLTEEQLRTMFEKYGKI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +I+ SKG GFV F AE A++ LNG I +G
Sbjct: 219 TSYKIMSKDDGK----------------SKGFGFVAFESPEAAETAVEALNGKEIIDG-- 260
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A A R + L + +F L + LN
Sbjct: 261 KPLYVGRAQKKAERQQEL-----------------------------KRRFEALKMERLN 291
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 292 RY---------QGVNLYVKNLDDTIDDERLRKEFSPFGTITSAKVMMEDN--RSKGFGFV 340
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 341 CFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 373
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS+ G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 71 TMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ +GT SKG GFV F A +++++NG +
Sbjct: 131 AQDE----------NGT------SKGYGFVHFETEEAANKSIEKVNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + F + R K A L N
Sbjct: 164 ---------------LNGKKVYVGRF----------IPRKEREKELGEKAKLFTN----- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + + L +F +G + + K++ K KGFGFV + +
Sbjct: 194 ---------VYVKNFGEDLTEEQLRTMFEKYGKITSYKIMSKDDG-KSKGFGFVAFESPE 243
Query: 325 EAVFAIQSLNGYALGD 340
A A+++LNG + D
Sbjct: 244 AAETAVEALNGKEIID 259
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 39/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T+E+L+ +F G++ S K++ K +S G+GFV + E AE A+
Sbjct: 192 TNVYVKNFGEDLTEEQLRTMFEKYGKITSYKIM-SKDDGKSKGFGFVAFESPEAAETAVE 250
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG ++ K + V A+ +E +KR NLYV L + E
Sbjct: 251 ALNGKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDE 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ E+ R SKG GFV F+ EA A+
Sbjct: 311 RLRKEFSPFGTITSAKVMM-----EDNR------------SKGFGFVCFSSPEEATKAVT 353
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I S+P+ V A R L + + A +R
Sbjct: 354 EMNGRIV--GSKPLYVALAQRKEDRKAHLTSQYMQRMANIR 392
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SLH SG IF+ NL ++ L+ F FG + + KVV D KG+GFV +
Sbjct: 92 SLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQE 149
Query: 325 EAVFAIQSLNGYALGDRLLQVS-FKTHK 351
A AI+ +NG L DR + V FK+ K
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRK 177
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 70/309 (22%)
Query: 39 TQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSI 98
T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+ +N ++ K +
Sbjct: 23 TEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPV 82
Query: 99 KVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRS 156
++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG------ 136
Query: 157 FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
SKG GFV F AE A++++NG + K
Sbjct: 137 -----------SKGYGFVHFETQEAAERAIEKMNGML----------------LNDRKVF 169
Query: 217 AANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFV 276
++ A + F N +++
Sbjct: 170 VGRFKSRKEREAELGARAKEFTN----------------------------------VYI 195
Query: 277 YNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGY 336
N + +D L LFG FG +VKV+ D ++ K KGFGFV +++A A+ +NG
Sbjct: 196 KNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 337 ALGDRLLQV 345
L + + V
Sbjct: 255 ELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAIST 157
Query: 88 LNGLKLQNKSIKVSY--ARPSSEAIKRA------NLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + +R EA RA N+YV L M ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELRARAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKL 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ ++NG E +
Sbjct: 218 LSVKVMKDNNGH----------------SRGFGFVNFEKHEEAQKAVMDMNGK--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + KF + D LN
Sbjct: 260 QLYV-------GRAQKRVERQN----------------------ELKRKFEQMKQDRLNR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIIGTKPLYVALAQRK 371
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L F G + S ++ RD T +SL Y ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQQAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELRARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV++D + +GFGFV ++
Sbjct: 192 --------NIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKDNNGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + R L V
Sbjct: 243 EAQKAVMDMNGKEVSGRQLYV 263
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 45/238 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + M ++ LQ LFS G++ S K+++D S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKD-NNGHSRGFGFVNFEKHEEAQKAVM 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+NG I ++P+ V A R +A+ +N Q + MR G PL S++
Sbjct: 353 MNGRII--GTKPLYVALAQRKEER-RAILSNQYMQR------LSTMRALGVPLLGSSQ 401
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RDK T +SLGY +VNY + D+ERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SLH SG IF+ NL ++ L+ F FG + + KVV D KG+GFV +
Sbjct: 92 SLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQE 149
Query: 325 EAVFAIQSLNGYALGDRLLQVS-FKTHK 351
A AI+ +NG L DR + V FK+ K
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRK 177
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 75 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 132
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 133 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 192
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 193 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 235
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 236 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 265
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 266 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVC 314
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 315 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 346
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 70/305 (22%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L FS G + S ++ RD T +SLGY +VN+ + DAERA+ +N ++ K +++ +
Sbjct: 2 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 103 AR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSG 160
++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 62 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG---------- 111
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
SKG GFV F AE A++++NG + K
Sbjct: 112 -------SKGYGFVHFETQEAAERAIEKMNGML----------------LNDRKVFVGRF 148
Query: 221 NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLA 280
++ A + F N +++ N
Sbjct: 149 KSRKEREAELGARAKEFTN----------------------------------VYIKNFG 174
Query: 281 PETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
+ +D L LFG FG +VKV+ D ++ K KGFGFV +++A A+ +NG L
Sbjct: 175 EDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNG 233
Query: 341 RLLQV 345
+ + V
Sbjct: 234 KQIYV 238
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 224
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 225 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 284
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 285 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 327
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 328 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 365
>gi|383472214|gb|AFH36034.1| HuB, partial [Trachemys dorbigni]
Length = 76
Score = 109 bits (273), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/58 (75%), Positives = 52/58 (89%)
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEA 326
G+GWCIFVYNLAP+ ++++LWQ+FGPFGAV NVKV+RD T KCKGFGFV MTNYDEA
Sbjct: 19 GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA 76
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 136 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 193
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 194 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 253
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 254 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 296
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 297 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 326
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 327 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 375
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 376 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 407
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 227 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 285
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 286 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 345
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 346 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 388
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 389 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 426
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 72/275 (26%)
Query: 75 YYRT--EDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLE 130
YY + +DAERA+ +N ++ K +++ +++ PS N+++ L K + + L
Sbjct: 93 YYSSSRQDAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALY 152
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
+ F +G I++ +++CD+ SKG GFV F AE A++++N
Sbjct: 153 DTFSAFGNILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMN 195
Query: 191 GTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFA 250
G + K ++ A + F N
Sbjct: 196 GML----------------LNDRKVFVGRFKSRKEREAELGARAKEFTN----------- 228
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
+++ N + +D L LFG FG +VKV+ D ++
Sbjct: 229 -----------------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESG 264
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
K KGFGFV +++A A+ +NG L + + V
Sbjct: 265 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 299
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 65/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D ++ G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEESIDNKALYDTFSTFGNILSCKVVCDDHGSR--GFGFVHFETREAAQQAIST 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L N+ + VS+ + E A++ N+YV L + ++ LE LF +G
Sbjct: 158 MNGMLLNNRKVFVSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLEELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ ++NG G
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ A N R F + + D LN
Sbjct: 262 YV---------GRAQKWAERQN---ELKRKFQ----------------QMKQMKQDRLN- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
H G ++V NL ++ L + F P+G + + KV+ + KGFGFVC
Sbjct: 293 --------HYQGVNLYVKNLDDSIDNERLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 342
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG LG + L V+ K
Sbjct: 343 FSSPEEATKAVTEMNGCILGTKPLYVALAQRK 374
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F A+ A+ +NG +
Sbjct: 131 VCDDHG-----------------SRGFGFVHFETREAAQQAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + + + N
Sbjct: 163 ---------------LNNRKVFVSHFKS---------RQEREAELGVRAMEFTN------ 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL + ++ L +LF FG +VKV+RD + +GFGFV ++
Sbjct: 193 ---------VYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDSGHS-RGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + +LL V
Sbjct: 243 EAQKAVMDMNGKEVRGQLLYV 263
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ L+ LFS G+ S K++RD + S G+GFVN+ + E+A++A++
Sbjct: 191 TNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDS-GHSRGFGFVNFEKHEEAQKAVM 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR------------------ANLYVSGLPKHMT 125
++NG +++ + + V A+ +E +KR NLYV L +
Sbjct: 250 DMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQDRLNHYQGVNLYVKNLDDSID 309
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
E L F PYG I +++++ + SKG GFV F+ EA A
Sbjct: 310 NERLRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKA 352
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGN 239
+ E+NG I ++P+ V A R KA+ N Q +A H G+
Sbjct: 353 VTEMNGCIL--GTKPLYVALAQRKDER-KAILTNQFMQQRLSNVWALGGPHLGS 403
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 93
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 94 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 153
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 154 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 196
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 197 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 226
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 227 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 275
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 276 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 307
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 127 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 185
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 186 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 245
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 246 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 288
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 289 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 326
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 61 ILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----- 98
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 99 -----------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------- 128
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 129 ---------------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFV 172
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 173 SFERHEDAQKAVDEMNGKELNGKQIYV 199
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 177
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 178 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 237
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 238 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 280
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 281 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 310
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 311 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 359
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 360 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 391
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 211 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 269
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 270 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 329
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 330 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 372
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 373 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 410
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 107/271 (39%), Gaps = 70/271 (25%)
Query: 77 RTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFR 134
R E +ERA+ +N ++ K +++ +++ PS N+++ L K + + L + F
Sbjct: 81 RVEPSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 140
Query: 135 PYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIP 194
+G I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 141 AFGNILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML- 182
Query: 195 EGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTA 254
K ++ A + F N
Sbjct: 183 ---------------LNDRKVFVGRFKSRKEREAELGARAKEFTN--------------- 212
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
+++ N + +D L LFG FG +VKV+ D ++ K KG
Sbjct: 213 -------------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKG 252
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
FGFV +++A A+ +NG L + + V
Sbjct: 253 FGFVSFERHEDAQKAVDEMNGKELNGKQIYV 283
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + E A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G +
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNG--K 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 260 QIYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 70/346 (20%)
Query: 3 KHEEMYNTTQSHRSTYQSDVNE-QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
K E + S SD N +N++L V + ++T+ L +FS+VG V S ++ RD
Sbjct: 54 KKETTQEKSSEASSGTPSDGNAPKNTSLYVGELDPSVTEAMLFEIFSTVGPVASIRVCRD 113
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSG 119
T QSLGY +VNY+ +D E+A+ ELN ++ ++ ++ +++ PS N+++
Sbjct: 114 AVTRQSLGYAYVNYHNADDGEKALEELNYSLIKGRACRIMWSQRDPSLRKTGTGNIFIKN 173
Query: 120 LPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQH 179
L + + L + F +GTI++ ++ D+ + SKG GFV F
Sbjct: 174 LDPAIDNKALHDTFSAFGTILSCKVALDEYGN----------------SKGYGFVHFASI 217
Query: 180 IEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGN 239
A A++ +NG + LN + + H +
Sbjct: 218 DSANAAIEHVNGML--------------------------LNDKKVYVGHHVS------- 244
Query: 240 PLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
+ KF + A+ N +++ N+ PE D LF FGA+
Sbjct: 245 --RRDRQSKFEAMKANFTN---------------VYIKNIDPEVTDEEFSGLFEKFGAIT 287
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
+ +V+D ++ K +GFGFV +++ A A+ +N Y + L V
Sbjct: 288 SFSLVKD-ESGKPRGFGFVNFESHEAAQKAVDEMNDYEFHGKKLYV 332
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 66/334 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + L FS+ G + SCK+ D+ S GYGFV++ + A AI
Sbjct: 168 NIFIKNLDPAIDNKALHDTFSAFGTILSCKVALDEY-GNSKGYGFVHFASIDSANAAIEH 226
Query: 88 LNGLKLQNKSIKVSY-----ARPSS-EAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + R S EA+K N+Y+ + +T E+ LF +G I
Sbjct: 227 VNGMLLNDKKVYVGHHVSRRDRQSKFEAMKANFTNVYIKNIDPEVTDEEFSGLFEKFGAI 286
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ ++ D+ SG P +G GFV F H A+ A+ E+N G
Sbjct: 287 TSFSLVKDE----------SGKP------RGFGFVNFESHEAAQKAVDEMNDYEFHGKKL 330
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + + A +R M+ L ++++
Sbjct: 331 YV---------GRAQ----KRHEREAELRKRYEQMK-----LEKMSKYQ----------- 361
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +F+ NL+ E +DN+L F FG + + KV+ D + K KGFGFVC
Sbjct: 362 -----------GVNLFIKNLSDEVDDNLLKTEFSAFGTITSAKVMTD-ENGKSKGFGFVC 409
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
++ +EA AI +N L + L V+ K +
Sbjct: 410 YSSPEEATKAIAEMNQRMLAGKPLYVALAQRKDV 443
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 37/215 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +T EE LF G + S L++D++ + G+GFVN+ E A++A+
Sbjct: 260 TNVYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKDES-GKPRGFGFVNFESHEAAQKAVD 318
Query: 87 ELNGLKLQNKSIKVSYARP----SSEAIKR--------------ANLYVSGLPKHMTQED 128
E+N + K + V A+ +E KR NL++ L +
Sbjct: 319 EMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGVNLFIKNLSDEVDDNL 378
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ F +GTI +++++ D EN + SKG GFV ++ EA A+ E
Sbjct: 379 LKTEFSAFGTITSAKVMTD----ENGK------------SKGFGFVCYSSPEEATKAIAE 422
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQ 223
+N + G +P+ V A R L A + A+
Sbjct: 423 MNQRMLAG--KPLYVALAQRKDVRRSQLEAQIQAR 455
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + + L+ FS+ G + S K++ D+ +S G+GFV Y E+A +A
Sbjct: 361 QGVNLFIKNLSDEVDDNLLKTEFSAFGTITSAKVMTDEN-GKSKGFGFVCYSSPEEATKA 419
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
I E+N L K + V+ A+ + ++R+ L
Sbjct: 420 IAEMNQRMLAGKPLYVALAQ--RKDVRRSQL 448
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGINDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FGA +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGAALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGINDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIKK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIKKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRVVATKPLYVALAQRK 371
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + A++P+ V A R L + A++R
Sbjct: 353 MNGRV--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 71/380 (18%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ LQ FS +G V S ++ RD T SLGYG+VN+ + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN L + I++ +++ PS + N+++ L K + Q++L + F +G I++ +
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILSCK 131
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI---------- 193
I+ D+ SKG GFV F + AE A++++N I
Sbjct: 132 IVMDENGQ----------------SKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGK 175
Query: 194 ----PEGASEPITVKFAN------SPAGRAKALAANLN-----AQAAAMRHFAAAMRHFG 238
E S+ VKF N P + L N A M+ + FG
Sbjct: 176 FIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFG 235
Query: 239 -----NPLH------------------HSARFKFAPLTADLLNNSMLPPKSLHGSGWC-- 273
+P H + AR + + L + ++ S +
Sbjct: 236 FVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLN 295
Query: 274 --IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
++V NL +D L + F G++ + KV++D + KGFGFVC N ++A A+
Sbjct: 296 VNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN-RSKGFGFVCFANPEQAARAVT 354
Query: 332 SLNGYALGDRLLQVSFKTHK 351
+NG +G + L V+ K
Sbjct: 355 DMNGTIIGSKPLYVALAQRK 374
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + P E+L+ +F+ GE++S +++D + +S G+GFV + + AE A+
Sbjct: 192 NNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKD-SEGKSKGFGFVCFLDPDHAENAVK 250
Query: 87 ELNGLKLQNKSIKVSYARPSSE---------AIKRA----------NLYVSGLPKHMTQE 127
++G +++ +++ + A+ E +RA NLYV L ++ +
Sbjct: 251 TMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDK 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
LE F +G+I +++++ D N RS KG GFV F +A A+
Sbjct: 311 RLEEAFSVHGSITSAKVMKDA----NNRS------------KGFGFVCFANPEQAARAVT 354
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
++NGTI S+P+ V A R L + A R+ A+M
Sbjct: 355 DMNGTII--GSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNPVASM 399
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 3 KHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK 62
+ EE+ + R+ QS N NL V + + + L+ FS G + S K+++D
Sbjct: 273 RQEELKQRLEKQRAERQSSY-MLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDA 331
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+S G+GFV + E A RA+ ++NG + +K + V+ A+ + +RA L
Sbjct: 332 NN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKED--RRAKL 381
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 71/380 (18%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ LQ FS +G V S ++ RD T SLGYG+VN+ + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN L + I++ +++ PS + N+++ L K + Q++L + F +G I++ +
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILSCK 131
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI---------- 193
I+ D+ SKG GFV F + AE A++++N I
Sbjct: 132 IVMDENGQ----------------SKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGK 175
Query: 194 ----PEGASEPITVKFAN------SPAGRAKALAANLN-----AQAAAMRHFAAAMRHFG 238
E S+ VKF N P + L N A M+ + FG
Sbjct: 176 FIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFG 235
Query: 239 -----NPLH------------------HSARFKFAPLTADLLNNSMLPPKSLHGSGWC-- 273
+P H + AR + + L + ++ S +
Sbjct: 236 FVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLN 295
Query: 274 --IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
++V NL +D L + F G++ + KV++D + KGFGFVC N ++A A+
Sbjct: 296 VNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN-RSKGFGFVCFANPEQAARAVT 354
Query: 332 SLNGYALGDRLLQVSFKTHK 351
+NG +G + L V+ K
Sbjct: 355 DMNGTIIGSKPLYVALAQRK 374
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + P E+L+ +F+ GE++S +++D + +S G+GFV + + AE A+
Sbjct: 192 NNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKD-SEGKSKGFGFVCFLDPDHAENAVK 250
Query: 87 ELNGLKLQNKSIKVSYARPSSE---------AIKRA----------NLYVSGLPKHMTQE 127
++G +++ +++ + A+ E +RA NLYV L ++ +
Sbjct: 251 TMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDK 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
LE F +G+I +++++ D N RS KG GFV F +A A+
Sbjct: 311 RLEEAFSVHGSITSAKVMKDA----NNRS------------KGFGFVCFANPEQAARAVT 354
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
++NGTI S+P+ V A R L + A R+ A+M
Sbjct: 355 DMNGTII--GSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNPVASM 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 3 KHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK 62
+ EE+ + R+ QS N NL V + + + L+ FS G + S K+++D
Sbjct: 273 RQEELKQRLEKQRAERQSSY-MLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDA 331
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+S G+GFV + E A RA+ ++NG + +K + V+ A+ + +RA L
Sbjct: 332 NN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKED--RRAKL 381
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D S G+GFV++ E A++AI
Sbjct: 100 NVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAIST 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A N+YV LP H+ + L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ ++NG G
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + +F D LN
Sbjct: 262 YV---------GRAQKRGERQN----------------------ELKRRFEHTKQDRLNR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 C---------QGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIIGTKPLYVALAQRK 371
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDDHG-----------------SRGFGFVHFETHEAAQQAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARATAFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVMDMNGMQVSGRLLYV 263
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + + LQ LFS G++ S K++RD + S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDS-GHSRGFGFVNFEKHEEAQKAVM 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG+++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR G P
Sbjct: 353 MNGRII--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRALGGPF 396
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 71/380 (18%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ LQ FS +G V S ++ RD T SLGYG+VN+ + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN L + I++ +++ PS + N+++ L K + Q++L + F +G I++ +
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILSCK 131
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI---------- 193
I+ D+ SKG GFV F + AE A++++N I
Sbjct: 132 IVMDENGQ----------------SKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGK 175
Query: 194 ----PEGASEPITVKFAN------SPAGRAKALAANLN-----AQAAAMRHFAAAMRHFG 238
E S+ VKF N P + L N A M+ + FG
Sbjct: 176 FIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFG 235
Query: 239 -----NPLH------------------HSARFKFAPLTADLLNNSMLPPKSLHGSGWC-- 273
+P H + AR + + L + ++ S +
Sbjct: 236 FVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLN 295
Query: 274 --IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
++V NL +D L + F G++ + KV++D + KGFGFVC N ++A A+
Sbjct: 296 VNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN-RSKGFGFVCFANPEQAARAVT 354
Query: 332 SLNGYALGDRLLQVSFKTHK 351
+NG +G + L V+ K
Sbjct: 355 DMNGTIIGSKPLYVALAQRK 374
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + P E+L+ +F+ GE++S +++D + +S G+GFV + + AE A+
Sbjct: 192 NNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKD-SEGKSKGFGFVCFLDPDHAENAVK 250
Query: 87 ELNGLKLQNKSIKVSYARPSSE---------AIKRA----------NLYVSGLPKHMTQE 127
++G +++ +++ + A+ E +RA NLYV L ++ +
Sbjct: 251 TMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDK 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
LE F +G+I +++++ D N RS KG GFV F +A A+
Sbjct: 311 RLEEAFSVHGSITSAKVMKDA----NNRS------------KGFGFVCFANPEQAARAVT 354
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
++NGTI S+P+ V A R L + A R+ A+M
Sbjct: 355 DMNGTII--GSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNPVASM 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 3 KHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK 62
+ EE+ + R+ QS N NL V + + + L+ FS G + S K+++D
Sbjct: 273 RQEELKQRLEKQRAERQSSY-MLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDA 331
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+S G+GFV + E A RA+ ++NG + +K + V+ A+ + +RA L
Sbjct: 332 NN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKED--RRAKL 381
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ + A+RAI +
Sbjct: 87 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 144
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 145 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKT 204
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H EA A++E+NG G
Sbjct: 205 LSVKVMTDPTGK----------------SKGFGFVSFEKHEEANKAVEEMNGKDING--- 245
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 246 --KMVF----VGRAQ---KKVERQAELKRRFEQLKQ------ERISRYQ----------- 279
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 280 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 326
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 327 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 358
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 70/295 (23%)
Query: 53 VESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAI 110
V S ++ RD T +SL Y +VN+ + DAERA+ +N ++ K I++ +++ PS
Sbjct: 24 VLSIRVCRDMITRRSLFYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKS 83
Query: 111 KRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKG 170
N+++ L K + + L + F +G I++ +++CD+ SKG
Sbjct: 84 GVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-----------------SKG 126
Query: 171 IGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHF 230
FV F A+ A++++NG + K ++
Sbjct: 127 YAFVHFETQDAADRAIEKMNGML----------------LNDRKVFVGRFKSRKEREAEL 170
Query: 231 AAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
A + F N +++ N + +D L +
Sbjct: 171 GAKAKEFTN----------------------------------VYIKNFGDDMDDERLKE 196
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
LFG +G +VKV+ DP T K KGFGFV ++EA A++ +NG + +++ V
Sbjct: 197 LFGKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMVFV 250
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LF G+ S K++ D T +S G+GFV++ + E+A +A+
Sbjct: 178 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVE 236
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 237 EMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 296
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 297 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 339
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 340 MNGRI--VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 381
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H EA A++E+NG G
Sbjct: 218 LSVKVMTDPTGK----------------SKGFGFVSFEKHEEANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ A QA R F + +R++
Sbjct: 259 --KMLFV----GRAQKKAER---QAELKRRFEQLKQE------RLSRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG +G +VKV+ DP T K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A++ +NG + ++L V
Sbjct: 243 EANKAVEEMNGKDINGKMLFV 263
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LF G+ S K++ D T +S G+GFV++ + E+A +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ +E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + E A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D+ A S GYGFV++ E A ++I +
Sbjct: 91 NVFIKNLDKAIDNKAMYDTFSAFGNILSCKVAQDENGA-SKGYGFVHFETEEAANKSIEK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + + E L ++F YG I
Sbjct: 150 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLRDMFEKYGRI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ + S S+G GFV F AE A ELNG + EG
Sbjct: 210 TSHKVMYKEDGS----------------SRGFGFVAFEDPDAAERACLELNGKELVEG-- 251
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A A R K L + KF L ++ L
Sbjct: 252 KPLYVGRAQKKAERQKEL-----------------------------KRKFEQLKSERLT 282
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 283 RY---------QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFV 331
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 332 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPSDAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 62 TMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKAIDNKAMYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A +++++NG +
Sbjct: 122 AQDENGA----------------SKGYGFVHFETEEAANKSIEKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGRFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + D +L +F +G + + KV+ + +GFGFV + D
Sbjct: 185 ---------VYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYK-EDGSSRGFGFVAFEDPD 234
Query: 325 EAVFAIQSLNGYAL 338
A A LNG L
Sbjct: 235 AAERACLELNGKEL 248
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + E L+ +F G + S K++ K S G+GFV + + AERA +
Sbjct: 183 TNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMY-KEDGSSRGFGFVAFEDPDAAERACL 241
Query: 87 ELNGLKL----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQE 127
ELNG +L + K +K + + SE + R NLYV L + E
Sbjct: 242 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ E+ R SKG GFV F+ EA A+
Sbjct: 302 RLRKEFAPFGTITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVT 344
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I ++P+ V A R L + + A+MR
Sbjct: 345 EMNGRIV--GTKPLYVALAQRKEDRKAHLTSQYMQRMASMR 383
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKRVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + E A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K +Q A + F N
Sbjct: 163 -----LNDRKVFVGRFKSQKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 177
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 178 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 237
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 238 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 280
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 281 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 310
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 311 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 359
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 360 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 391
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 211 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 269
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 270 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 329
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 330 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 372
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 373 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 410
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 70/266 (26%)
Query: 82 ERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+RA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G I
Sbjct: 86 KRALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 145
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 146 LSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML------ 182
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
K ++ A + F N
Sbjct: 183 ----------LNDRKVFVGRFKSRKEREAELGARAKEFTN-------------------- 212
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 213 --------------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVS 257
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 258 FERHEDAQKAVDEMNGKELNGKQIYV 283
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 115 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 172
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 173 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 232
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 233 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 275
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 276 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 305
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 306 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 354
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 355 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 206 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 264
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 265 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 324
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 325 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 367
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 368 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 405
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 105/266 (39%), Gaps = 70/266 (26%)
Query: 82 ERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
ERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G I
Sbjct: 81 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 140
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 141 LSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML------ 177
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
K ++ A + F N
Sbjct: 178 ----------LNDRKVFVGRFKSRKEREAELGARAKEFTN-------------------- 207
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 208 --------------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVS 252
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 253 FERHEDAQKAVDEMNGKELNGKQIYV 278
>gi|226480808|emb|CAX73501.1| ELAV-like protein 2 [Schistosoma japonicum]
Length = 161
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
LIVNY+PQTM+Q+E++ LFS +G++ SCKLIRDK T QSLGYGFVNY DAERAI L
Sbjct: 87 LIVNYLPQTMSQDEMRGLFSKIGKLTSCKLIRDKLTGQSLGYGFVNYVDASDAERAIRVL 146
Query: 89 NGLKLQNKSIKV 100
N +KLQNK+IKV
Sbjct: 147 NKMKLQNKTIKV 158
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + E A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D LW+ F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLWKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALH 70
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ KR N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 WKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRTASVR 390
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 146
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 147 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 189
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 190 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 219
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 220 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 268
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + V+ K
Sbjct: 269 FSSPEEATKAVTEMNGRIVATKPFYVALAQRK 300
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 178
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 238
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 239 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 281
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I A++P V A
Sbjct: 282 MNGRI--VATKPFYVALA 297
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 70/255 (27%)
Query: 93 LQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
++ K +++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 6 IKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG 65
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
SKG GFV F AE A++++NG +
Sbjct: 66 -----------------SKGYGFVHFETQEAAERAIEKMNGML----------------L 92
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGS 270
K ++ A + F N
Sbjct: 93 NDRKVFVGRFKSRKEREAELGARAKEFTN------------------------------- 121
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV +++A A+
Sbjct: 122 ---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAV 177
Query: 331 QSLNGYALGDRLLQV 345
+NG L + + V
Sbjct: 178 DEMNGKELNGKQIYV 192
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ FS G + S K++ + +S G+GFV + E+A +A
Sbjct: 221 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKA 278
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K V+ A+ E
Sbjct: 279 VTEMNGRIVATKPFYVALAQRKEE 302
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 155/350 (44%), Gaps = 49/350 (14%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTT--AQSLGYGFVNYYRTEDAERAII 86
+ V +P++ ++E+L+ LF G V ++RD++ QS G FV YY + A A
Sbjct: 45 MFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQN 104
Query: 87 ELNGLKL---QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
L+ +K+ + I++ A ++ L++ + K + D+ +F PYG I R
Sbjct: 105 ALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECR 164
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGASEPIT 202
IL P+ +S+G FV F A+ A++ ++ + EG S PI
Sbjct: 165 IL--------------RGPD--GLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 208
Query: 203 VKFANSPAGRAK------ALAANLNAQAAAMRHFAAAMRHFG--------NPLHHSARFK 248
VKFA++ + + AA++ + G L HSA
Sbjct: 209 VKFADTQKDKEQKRMVQQLQQQMQQLSAASIWGNLTGLNSLGPQYLALYLQLLQHSAS-- 266
Query: 249 FAPLTADLLNNSMLPPKSLHGS-------GWCIFVYNLAPETEDNVLWQLFGPFGAVQNV 301
+ + LNN + + + G +F+Y+L E D L Q+F PFG V +
Sbjct: 267 ----SGNALNNLLSVSRGVIDGVLFAGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISA 322
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KV D QT K FGFV N A AIQS+NG+ +G + L+V K K
Sbjct: 323 KVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSK 372
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ +NL + ++PQ ++L +F G V S K+ DK T S +GFV+Y A+ A
Sbjct: 291 EGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 350
Query: 85 IIELNGLKLQNKSIKVSYARPSSEA 109
I +NG ++ K +KV R +++
Sbjct: 351 IQSMNGFQIGMKRLKVQLKRSKNDS 375
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Query: 104 RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPE 163
+P +AIK ++V +P+ ++E L LF PYG + +L D+ S+N
Sbjct: 37 QPDVDAIK---MFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDR--SQN---------- 81
Query: 164 IPQISKGIGFVRF---NQHIEAEHAMQELNGTIPEGASEPITVKFANS 208
P SKG FV + +EA++A+ N I G PI +K A+S
Sbjct: 82 -PPQSKGCCFVTYYTRKSALEAQNALH--NMKILPGMHHPIQMKPADS 126
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 35 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 92
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 93 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 152
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 153 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 195
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 196 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 225
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 226 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 274
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + V+ K
Sbjct: 275 FSSPEEATKAVTEMNGRIVATKPFYVALAQRK 306
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 126 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 184
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 185 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 244
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 245 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 287
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I A++P V A
Sbjct: 288 MNGRI--VATKPFYVALA 303
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 70/266 (26%)
Query: 82 ERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
ERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G I
Sbjct: 1 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 60
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 61 LSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML------ 97
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
K ++ A + F N
Sbjct: 98 ----------LNDRKVFVGRFKSRKEREAELGARAKEFTN-------------------- 127
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 128 --------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVS 172
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 173 FERHEDAQKAVDEMNGKELNGKQIYV 198
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ FS G + S K++ + +S G+GFV + E+A +A
Sbjct: 227 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKA 284
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K V+ A+ E
Sbjct: 285 VTEMNGRIVATKPFYVALAQRKEE 308
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D LW+ F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLWKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALH 70
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ KR N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 WKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRTASVR 390
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 136/327 (41%), Gaps = 66/327 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+ S GYGFV+Y E AE AI
Sbjct: 135 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEH-GNSKGYGFVHYETAEAAENAIKN 193
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + E + NLY+ + +T E+ E LFR G +
Sbjct: 194 VNGMLLNDKKVYVGHHISRKERQSKIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNV 253
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+S I D+ S+G GFV + H EA+ A+ LN G
Sbjct: 254 TSSVIQRDEEGR----------------SRGFGFVNYETHEEAQKAVDNLNDKDFHG--R 295
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R + L H AR +
Sbjct: 296 KLFVSRAQKKAEREEEL----------------------RKAHEQARLE----------- 322
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
K G ++V NL + +D L F PFG + + KV+RD + KGFGFVC
Sbjct: 323 -----KLSKYQGLNLYVKNLDDDVDDEKLRAEFEPFGTITSAKVMRDDKGV-SKGFGFVC 376
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVS 346
++ +EA A+ +N +G + L VS
Sbjct: 377 YSSPEEASKAVAEMNNKMIGSKPLYVS 403
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 69/328 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 45 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 104
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++N+ ++ +++ P+ + N+++ L + + + L + F +G +++ +
Sbjct: 105 EQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 164
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + AE+A++ +NG +
Sbjct: 165 VATDEHGN----------------SKGYGFVHYETAEAAENAIKNVNGML---------- 198
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S K + A N
Sbjct: 199 ----------------LNDKKVYVGH------HISRKERQS---KIDEMKAQFTN----- 228
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ N+ PE D LF G V + + RD + + +GFGFV +
Sbjct: 229 ----------LYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEG-RSRGFGFVNYETH 277
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A+ +LN R L VS K
Sbjct: 278 EEAQKAVDNLNDKDFHGRKLFVSRAQKK 305
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 41/254 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNE---QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS ++E Q +NL + + +T EE + LF G V S
Sbjct: 198 LLNDKKVYVGHHISRKERQSKIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNVTSSV 257
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKRA- 113
+ RD+ +S G+GFVNY E+A++A+ LN + + VS A+ + E +++A
Sbjct: 258 IQRDEE-GRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELRKAH 316
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLYV L + E L F P+GTI +++++ D
Sbjct: 317 EQARLEKLSKYQGLNLYVKNLDDDVDDEKLRAEFEPFGTITSAKVMRDDKG--------- 367
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+SKG GFV ++ EA A+ E+N + S+P+ V A R + L +
Sbjct: 368 -------VSKGFGFVCYSSPEEASKAVAEMNNKMI--GSKPLYVSHAQRREVRRQQLESQ 418
Query: 220 LNAQAAAMRHFAAA 233
+ AQ + H AAA
Sbjct: 419 I-AQRNQIMHQAAA 431
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 164/382 (42%), Gaps = 74/382 (19%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D + ++L V +P +T+ L FS+VG V S ++ RD T SLGY +VN+ D
Sbjct: 4 DAKYRQASLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVAD 63
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGT 138
A+RA+ +N +Q +SI++ +++ + K N+++ L K + + L F +G
Sbjct: 64 AQRALDTMNFDVIQGQSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSVFGK 123
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG-- 196
I++S+++CD Q S+G GFV F A+ A++E+NG + +
Sbjct: 124 ILSSKVMCD-----------------DQGSRGYGFVHFQNQAAADRAIEEMNGVLLKDFR 166
Query: 197 -------------------ASE---------------------------PITVKFANSPA 210
ASE ++VK +
Sbjct: 167 LFVGPFKNRRDREAELQNKASEFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSS 226
Query: 211 GRAKALA-ANLNAQAAAMR--HFAAAMRHFGNPLHHSARFKFAPLTADL--LNNSMLPPK 265
G++K + + AA R FG + K A A+L L +
Sbjct: 227 GKSKGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQER 286
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
S G I+V NL ++ L + F FG++ VKV+++ + +GFG +C ++ +E
Sbjct: 287 SWRVRGTKIYVKNLDETIDEEKLRKAFSSFGSIIRVKVMQEEG--RSRGFGLICFSSPEE 344
Query: 326 AVFAIQSLNGYALGDRLLQVSF 347
A A+ +NG LG + + ++
Sbjct: 345 AARAMAEMNGRLLGSKPVNIAL 366
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E+L+ FS G++ S K++ D ++ +S G+GFV++ E A+RA+
Sbjct: 190 TNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAKRAVD 248
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
+NG ++ + + V A+ +E ++ +YV L + + +E
Sbjct: 249 IVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLDETIDEEK 308
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F +G+II +++ E R S+G G + F+ EA AM E
Sbjct: 309 LRKAFSSFGSIIRVKVM-----QEEGR------------SRGFGLICFSSPEEAARAMAE 351
Query: 189 LNGTIPEGASEPITVKFA 206
+NG + S+P+ + A
Sbjct: 352 MNGRLL--GSKPVNIALA 367
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q +G+GFV N A AI+ +
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQG--SRGYGFVHFQNQAAADRAIEEM 157
Query: 334 NGYALGD-RLLQVSFKTHKP 352
NG L D RL FK +
Sbjct: 158 NGVLLKDFRLFVGPFKNRRD 177
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ + + V + +T+ +E+L+ FSS G + K+++++ +S G+G + + E+A RA
Sbjct: 291 RGTKIYVKNLDETIDEEKLRKAFSSFGSIIRVKVMQEE--GRSRGFGLICFSSPEEAARA 348
Query: 85 IIELNGLKLQNKSIKVSYARPS 106
+ E+NG L +K + ++ A+ +
Sbjct: 349 MAEMNGRLLGSKPVNIALAQRA 370
>gi|328773103|gb|EGF83140.1| hypothetical protein BATDEDRAFT_34010 [Batrachochytrium
dendrobatidis JAM81]
Length = 718
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + T+ + L FS+ G++ SCK+ D +SLG+GFV+Y E AE AI
Sbjct: 153 GNIFIKNLHTTIDHKALHDTFSAFGKILSCKIAMDGE--RSLGHGFVHYETMEMAENAIK 210
Query: 87 ELNGLKLQNKSIKVSY-----ARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L ++ + V R S+ KR+ N+YV + + Q+ E +F P+GT
Sbjct: 211 HVNGMLLNDQQVYVGLHISKKERSSTIEEKRSKFTNIYVKNIDASVDQKAFEEMFHPFGT 270
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
++ ++ D+ + SK GFV + H +A A++E++ E
Sbjct: 271 TVSCVLMVDEEGN----------------SKEFGFVNYENHEDARRAVEEMHEK--EIGG 312
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ I V A R + L R ++ + + L+
Sbjct: 313 KQIYVGRAQKKFEREEEL-----------------------------RRQYEKIREEKLS 343
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +FV N+ +D L Q F FGA+ + K++ D +T KGFGFV
Sbjct: 344 KY---------QGVNLFVKNIDESIDDEKLRQEFSVFGAITSTKIMVDEKTGISKGFGFV 394
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C +N DEA A+ +N L ++ + V+ K
Sbjct: 395 CFSNPDEATKAVTEMNNRMLANKPIYVALAQRK 427
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 38/236 (16%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
++ RS+ + + +N+ V + ++ Q+ + +F G SC L+ D+ S +
Sbjct: 229 SKKERSSTIEEKRSKFTNIYVKNIDASVDQKAFEEMFHPFGTTVSCVLMVDEE-GNSKEF 287
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPS---SEAIKR--------------- 112
GFVNY EDA RA+ E++ ++ K I V A+ E ++R
Sbjct: 288 GFVNYENHEDARRAVEEMHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQG 347
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NL+V + + + E L F +G I +++I+ D+ ISKG G
Sbjct: 348 VNLFVKNIDESIDDEKLRQEFSVFGAITSTKIMVDEKTG---------------ISKGFG 392
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
FV F+ EA A+ E+N + A++PI V A R + LAA + Q AMR
Sbjct: 393 FVCFSNPDEATKAVTEMNNRML--ANKPIYVALAQRKEVRRQQLAAQM--QQRAMR 444
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 21/170 (12%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L + + ++T+ L +F+ VG V S ++ RD T +SLGYG++NY DAERA+
Sbjct: 65 ASLYIGDLEPSVTEAMLFEVFNMVGPVASIRVCRDAVTRRSLGYGYINYLDIADAERALD 124
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ +++ ++ A++RA N+++ L + + L + F +G I++ +
Sbjct: 125 TLNYTTVRGNPVRIMWSN-RDPALRRAGTGNIFIKNLHTTIDHKALHDTFSAFGKILSCK 183
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
I D + S G GFV + AE+A++ +NG +
Sbjct: 184 IAMDG-----------------ERSLGHGFVHYETMEMAENAIKHVNGML 216
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 36/62 (58%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+++ +L P + +L+++F G V +++V RD T + G+G++ + +A A+ +
Sbjct: 66 SLYIGDLEPSVTEAMLFEVFNMVGPVASIRVCRDAVTRRSLGYGYINYLDIADAERALDT 125
Query: 333 LN 334
LN
Sbjct: 126 LN 127
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A+ A+ E+NG G S
Sbjct: 218 LSVKVMTDDNGK----------------SKGFGFVSFERHEDAQKAVDEMNGKDMNGKSM 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q R KF + D +
Sbjct: 262 FV---------GRAQ---KKVERQTELKR-------------------KFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + D L ++FG +G +VKV+ D K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNG 335
+A A+ +NG
Sbjct: 243 DAQKAVDEMNG 253
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +F G S K++ D +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + KS+ V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFLPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A+ A+ E+NG G S
Sbjct: 218 LSVKVMTDDNGK----------------SKGFGFVSFERHEDAQKAVDEMNGKDMNGKSM 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q R KF + D +
Sbjct: 262 FV---------GRAQ---KKVERQTELKR-------------------KFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + D L ++FG +G +VKV+ D K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNG 335
+A A+ +NG
Sbjct: 243 DAQKAVDEMNG 253
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +F G S K++ D +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + KS+ V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFLPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A+ A+ ++NG G +
Sbjct: 218 LSVKVMTDDNGK----------------SKGFGFVSFERHEDAQKAVDDMNGKDMNGKA- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++FG +G +VKV+ D K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + + + V
Sbjct: 243 DAQKAVDDMNGKDMNGKAIYV 263
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ +F G S K++ D +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG + K+I V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG E + +
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFEKHEDAQKAVDEMNGK--ELSGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 260 QIYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELSGKQIYV 263
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ + EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFEKHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDEGGK----------------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-EGGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D+ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEG-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDPTGK----------------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKRRFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP T K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKDINGKMVFV 263
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LFS G+ S K++ D T +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 72/339 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS+ G + SCK+ +D+ S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDEN-GTSKGYGFVHFETEEAANKSIEK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + +++E L N+F +G I
Sbjct: 159 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDLSEEQLRNMFEKFGKI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ SKG GFV F AE A+ LNG + EG
Sbjct: 219 TSYKVMSKDDGK----------------SKGFGFVAFESPEAAETAVDALNGKELVEG-- 260
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A A R + L + +F L + LN
Sbjct: 261 KPLYVGRAQKKAERQQEL-----------------------------KRRFEALKMERLN 291
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ------TYKC 312
G ++V NL +D L + F PFG + + KV+ + T +
Sbjct: 292 RY---------QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMIEENKTESFITTRS 342
Query: 313 KGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KGFGFVC ++ +EA A+ +NG +G + L V+ K
Sbjct: 343 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 381
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 31/221 (14%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +++E+L+++F G++ S K++ K +S G+GFV + E AE A+
Sbjct: 192 TNVYVKNFGEDLSEEQLRNMFEKFGKITSYKVM-SKDDGKSKGFGFVAFESPEAAETAVD 250
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG +L + K + V A+ +E +KR NLYV L + E
Sbjct: 251 ALNGKELVEGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDE 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ ++ +E SF++ SKG GFV F+ EA A+
Sbjct: 311 RLRKEFAPFGTITSAKVMIEENKTE---SFITTR------SKGFGFVCFSSPEEATKAVT 361
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I S+P+ V A R L + + A MR
Sbjct: 362 EMNGRIV--GSKPLYVALAQRKEDRKAHLTSQYMQRMANMR 400
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 71 TMNFDLIRGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ +GT SKG GFV F A +++++NG +
Sbjct: 131 AQDE----------NGT------SKGYGFVHFETEEAANKSIEKVNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + F + R K A L N
Sbjct: 164 ---------------LNGKKVYVGRF----------IPRKEREKELGEKAKLFTN----- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + + L +F FG + + KV+ K KGFGFV + +
Sbjct: 194 ---------VYVKNFGEDLSEEQLRNMFEKFGKITSYKVMSKDDG-KSKGFGFVAFESPE 243
Query: 325 EAVFAIQSLNGYAL 338
A A+ +LNG L
Sbjct: 244 AAETAVDALNGKEL 257
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLI--RDKT----TAQSLGYGFVNYYRT 78
Q NL V + T+ E L+ F+ G + S K++ +KT T +S G+GFV +
Sbjct: 294 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMIEENKTESFITTRSKGFGFVCFSSP 353
Query: 79 EDAERAIIELNGLKLQNKSIKVSYAR 104
E+A +A+ E+NG + +K + V+ A+
Sbjct: 354 EEATKAVTEMNGRIVGSKPLYVALAQ 379
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP T K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-TGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDPTGK----------------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R F + +R++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKRKFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD T +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG S+G GFV + +H +A A++E+NGT G +
Sbjct: 218 LSVKVMTDP----------SGK------SRGFGFVSYEKHEDANKAVEEMNGTELNGKTV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + QA R KF L + ++
Sbjct: 262 FV---------GRAQK---KMERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++F +G +VKV+ DP + K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDP-SGKSRGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 243 DANKAVEEMNGTELNGKTVFV 263
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +F G+ S K++ D + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTD-PSGKSRGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K++ V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPA 394
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 267 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 324
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 325 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 384
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 385 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 427
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 428 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 457
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 458 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 506
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 507 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 538
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 358 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 416
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 417 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 476
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 477 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 519
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 520 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 557
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 70/273 (25%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 232 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 291
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 292 ILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----- 329
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 330 -----------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------- 359
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 360 ---------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFV 403
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+++A A+ +NG L + + V K
Sbjct: 404 SFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 436
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG +G +++ V
Sbjct: 243 DANKAVEEMNGKEIGGKVIFV 263
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EIGGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 VIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|226358689|gb|ACO51197.1| poly A binding protein, cytoplasmic 1 a [Hypophthalmichthys
nobilis]
Length = 290
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 68/317 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI
Sbjct: 26 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIE 83
Query: 87 ELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
++NG+ L ++ + V + E A + N+Y+ + M E L+ +F YG
Sbjct: 84 KMNGMLLNDRKVFVGRFKSRKERGAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFSKYGP 143
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
++ R++ D+ SKG GFV F +H +A+ A+ E+NG G
Sbjct: 144 ALSIRVMTDESGK----------------SKGFGFVSFERHEDAQRAVDEMNGKEMNG-- 185
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R L + KF + D +
Sbjct: 186 KQVYVGRAQKKGERQTEL-----------------------------KRKFEQMKQDRMT 216
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 217 RY---------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFV 265
Query: 319 CMTNYDEAVFAIQSLNG 335
C ++ +EA A+ +NG
Sbjct: 266 CFSSPEEATKAVTEMNG 282
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 38/193 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ +FS G S +++ D++ +S G+GFV++ R EDA+RA+
Sbjct: 118 TNVYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDES-GKSKGFGFVSFERHEDAQRAVD 176
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K + V A+ E +KR NLYV L + E
Sbjct: 177 EMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 236
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 237 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 279
Query: 189 LNGTIPEGASEPI 201
+NG I A++P+
Sbjct: 280 MNGRIV--ATKPL 290
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 70/256 (27%)
Query: 93 LQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
++ + +++ +++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 4 IKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG 63
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
S KG GFV F H AE A++++NG +
Sbjct: 64 S-----------------KGYGFVHFETHEAAERAIEKMNGML----------------L 90
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGS 270
K ++ A + F N
Sbjct: 91 NDRKVFVGRFKSRKERGAEMGARAKEFTN------------------------------- 119
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
+++ N + +D L ++F +G +++V+ D ++ K KGFGFV +++A A+
Sbjct: 120 ---VYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHEDAQRAV 175
Query: 331 QSLNGYALGDRLLQVS 346
+NG + + + V
Sbjct: 176 DEMNGKEMNGKQVYVG 191
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SL SG IF+ NL ++ L+ F FG + + KVV D KG+GFV ++
Sbjct: 19 SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHE 76
Query: 325 EAVFAIQSLNGYALGDRLLQVS-FKTHK 351
A AI+ +NG L DR + V FK+ K
Sbjct: 77 AAERAIEKMNGMLLNDRKVFVGRFKSRK 104
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ FS G + S K++ + +S G+GFV + E+A +A
Sbjct: 219 QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKA 276
Query: 85 IIELNG 90
+ E+NG
Sbjct: 277 VTEMNG 282
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 144/316 (45%), Gaps = 72/316 (22%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
+L V + +++ EL +F+ +G+V S ++ RD T +SLGY +VNY +DA +A+
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALEL 86
Query: 88 LNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LN ++ K I++ Y+ PS AN+++ L K + + L + F +GTI++ R++
Sbjct: 87 LNFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSIDNKALHDTFSAFGTILSCRVV 146
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
D + SKG GFV+F + A+ A++++NG +
Sbjct: 147 MDDAGN----------------SKGYGFVQFEKEESAQIAIEKVNGMLIN---------- 180
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPK 265
R ++A + Q M A+ ++F N
Sbjct: 181 -----DRQVSVAPFIRKQERDM----ASSKNFNN-------------------------- 205
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
++V NLA T D L ++F FG + + V+RD K K FGFV N D+
Sbjct: 206 --------VYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADG-KSKCFGFVNFENVDD 256
Query: 326 AVFAIQSLNGYALGDR 341
A A+++LNG + ++
Sbjct: 257 AANAVENLNGKLINEK 272
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 144/333 (43%), Gaps = 69/333 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +++ + L FS+ G + SC+++ D S GYGFV + + E A+ AI
Sbjct: 114 ANIFIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDA-GNSKGYGFVQFEKEESAQIAIE 172
Query: 87 ELNGLKLQNKSIKVS-YARPSSEAIKRA----NLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++NG+ + ++ + V+ + R + + N+YV L + T EDL +F +G I +
Sbjct: 173 KVNGMLINDRQVSVAPFIRKQERDMASSKNFNNVYVKNLAEATTDEDLRKVFAGFGPISS 232
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SK GFV F +A +A++ LNG +
Sbjct: 233 AVVMRDADGK----------------SKCFGFVNFENVDDAANAVENLNGKL-------- 268
Query: 202 TVKFANSPAGRAKALA---ANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ + A L A+ +R +F+
Sbjct: 269 -INEKEWYVGRAQKKSEREAELKAKFEQVRK------------EKEEKFQ---------- 305
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +++ N+ +D L +LF FG V + KV++ PQ + G GFV
Sbjct: 306 ------------GVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQG-QSMGSGFV 352
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA+ A+ +NG +G + L V+ K
Sbjct: 353 TFSAPEEAMQAVNDMNGKMVGSKPLYVALAQRK 385
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + T E+L+ +F+ G + S ++RD +S +GFVN+ +DA A+
Sbjct: 204 NNVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRD-ADGKSKCFGFVNFENVDDAANAVE 262
Query: 87 ELNGLKLQNKSIKVSYARPSS------------------EAIKRANLYVSGLPKHMTQED 128
LNG + K V A+ S E + NLY+ + + E
Sbjct: 263 NLNGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSIDDEK 322
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L LF +GT+ + C M S +S G GFV F+ EA A+ +
Sbjct: 323 LRELFAVFGTVTS----CKVMKSPQGQSM------------GSGFVTFSAPEEAMQAVND 366
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + S+P+ V A R + A L AQ A M+
Sbjct: 367 MNGKMV--GSKPLYVALAQ----RKEERRARLQAQFAQMQ 400
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ E+L+ LF+ G V SCK+++ QS+G GFV + E+A +A
Sbjct: 305 QGVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMK-SPQGQSMGSGFVTFSAPEEAMQA 363
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ ++NG + +K + V+ A+ E +RA L
Sbjct: 364 VNDMNGKMVGSKPLYVALAQRKEE--RRARL 392
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 71/317 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + + +L LF+ VG+V S ++ RD T +SLGYG+VN+ +DA RA+
Sbjct: 32 TSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALD 91
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN + NKSI+V Y+ PSS AN+++ L K + + L + F +G I++ +I
Sbjct: 92 VLNFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKI 151
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D SG SKG GFV+F A++A+ +LNG +
Sbjct: 152 ATDG----------SGQ------SKGYGFVQFEAEDSAQNAIDKLNGML----------- 184
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
+N + + HF L R L+ NN
Sbjct: 185 ---------------INDKQVFVGHF----------LRKQDRDNV--LSKTKFNN----- 212
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL+ ++ L FG +G + + ++RD + K FGFV N +
Sbjct: 213 ---------VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADG-RSKCFGFVNFENAE 262
Query: 325 EAVFAIQSLNGYALGDR 341
+A A+++LNG + D+
Sbjct: 263 DAAKAVEALNGKKVDDK 279
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 65/345 (18%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
SHR S +N+ + + +T+ + L FSS G++ SCK+ D + QS GYGF
Sbjct: 108 SHRDP--SSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATD-GSGQSKGYGF 164
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------AIKRANLYVSGLPKHMTQ 126
V + + A+ AI +LNG+ + +K + V + + K N+YV L + T+
Sbjct: 165 VQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTE 224
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+DL+N F YGTI ++ ++ D SK GFV F +A A+
Sbjct: 225 DDLKNEFGAYGTITSAVLMRDADGR----------------SKCFGFVNFENAEDAAKAV 268
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ LNG + + V A + R + L F + S
Sbjct: 269 EALNGKKVD--DKEWYVGKAQKKSEREQELKG-----------------RFEQTVKESVV 309
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF G +++ NL D L ++F FG + + K++RD
Sbjct: 310 DKF--------------------QGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRD 349
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
P +G GFV + +EA A+ +NG + + L V+ K
Sbjct: 350 PNGV-SRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAVAQRK 393
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 42/224 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T+++L++ F + G + S L+RD +S +GFVN+ EDA +A+
Sbjct: 211 NNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRD-ADGRSKCFGFVNFENAEDAAKAVE 269
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRA--------NLYVSGLPKHMTQE 127
LNG K+ +K V A+ SE +K + NLY+ L +T E
Sbjct: 270 ALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDE 329
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L+ +F +GTI + +I+ D +S+G GFV F+ EA A+
Sbjct: 330 KLKEMFSEFGTITSYKIMRDPNG----------------VSRGSGFVAFSTPEEASRALG 373
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
E+NG + S+P+ V A R + A L AQ + MR A
Sbjct: 374 EMNGKMI--VSKPLYVAVAQ----RKEDRRARLQAQFSQMRPVA 411
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++T E+L+ +FS G + S K++RD S G GFV + E+A RA
Sbjct: 313 QGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGV-SRGSGFVAFSTPEEASRA 371
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + +K + V+ A+ + +RA L
Sbjct: 372 LGEMNGKMIVSKPLYVAVAQRKED--RRARL 400
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V +L D+ L+ LF G V +V+V RD T + G+G+V TN +A A+
Sbjct: 33 SLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDV 92
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + ++ ++V + P
Sbjct: 93 LNFTPMNNKSIRVMYSHRDP 112
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMNDERLKELFDKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GF+ + +H +A A++++NGT G +
Sbjct: 218 LSVKVMTDPTGK----------------SRGFGFISYEKHEDANKAVEDMNGTELNGKTV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + QA R F + +R++
Sbjct: 262 FV---------GRAQK---KMERQAELKRKFEMLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + D L +LF +G +VKV+ DP T K +GFGF+ ++
Sbjct: 193 ---------VYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDP-TGKSRGFGFISYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 243 DANKAVEDMNGTELNGKTVFV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LF G+ S K++ D T +S G+GF++Y + EDA +A+
Sbjct: 191 TNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTD-PTGKSRGFGFISYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L K++ V A+ E +KR NLY+ L + E
Sbjct: 250 DMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPA 394
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ D+ S G+ FV+Y E A+ AI
Sbjct: 145 GNIFIKNLDDKIDNKALHDTFAAFGNILSCKVATDEN-GNSRGFAFVHYETGEAADAAIK 203
Query: 87 ELNGLKLQNKSIKVSY-----ARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L +K + V + R S +RA N+++ L TQ+DLE++F+P+G
Sbjct: 204 SVNGMLLNDKKVYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGE 263
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I+++ + + +SKG FV + H A+ A+ ELN G
Sbjct: 264 IVSAALSVGEDG----------------LSKGFAFVNYTTHDAAKKAVDELNDKEINGKK 307
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L +H R + TA
Sbjct: 308 --LYVGRAQKRAERDEELRR----------------------MHEERRLENESKTA---- 339
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V N+ E +D+ L F G + + KV+RD + +GFGFV
Sbjct: 340 ------------GVNLYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKG-ASRGFGFV 386
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + DEA A+Q +NG +G + L VS K
Sbjct: 387 CFSQPDEATRAVQEMNGKMIGTKPLYVSLAQKK 419
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y + QS V EQ +N+ + + TQ++L+ +F GE+ S
Sbjct: 209 LLNDKKVYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAA 268
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKR-- 112
L + S G+ FVNY + A++A+ ELN ++ K + V A+ + E ++R
Sbjct: 269 LSVGED-GLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMH 327
Query: 113 -------------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLYV + + L + F GTI +++++ D +
Sbjct: 328 EERRLENESKTAGVNLYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKGA-------- 379
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
S+G GFV F+Q EA A+QE+NG + ++P+ V A R +AL +
Sbjct: 380 --------SRGFGFVCFSQPDEATRAVQEMNGKMI--GTKPLYVSLAQKKEVRRQALESQ 429
Query: 220 LNAQAAAMRHFAAA 233
+ + A +AAA
Sbjct: 430 MQQRNAQRLQYAAA 443
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L +F+ VG V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 56 SASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 115
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++N+ ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 116 EHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILSCK 175
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D+ + S+G FV + A+ A++ +NG +
Sbjct: 176 VATDENGN----------------SRGFAFVHYETGEAADAAIKSVNGML 209
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ D+ S G+ FV+Y E A+ AI
Sbjct: 145 GNIFIKNLDDKIDNKALHDTFAAFGNILSCKVATDEN-GNSRGFAFVHYETGEAADAAIK 203
Query: 87 ELNGLKLQNKSIKVSY-----ARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L +K + V + R S +RA N+++ L TQ+DLE++F+P+G
Sbjct: 204 SVNGMLLNDKKVYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGE 263
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I+++ + + +SKG FV + H A+ A+ ELN G
Sbjct: 264 IVSAALSVGEDG----------------LSKGFAFVNYTTHDAAKKAVDELNDKEINGKK 307
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L +H R + TA
Sbjct: 308 --LYVGRAQKRAERDEELRR----------------------MHEERRLENESKTA---- 339
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V N+ E +D+ L F G + + KV+RD + +GFGFV
Sbjct: 340 ------------GVNLYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKG-ASRGFGFV 386
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + DEA A+Q +NG +G + L VS K
Sbjct: 387 CFSQPDEATRAVQEMNGKMIGTKPLYVSLAQKK 419
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y + QS V EQ +N+ + + TQ++L+ +F GE+ S
Sbjct: 209 LLNDKKVYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAA 268
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKR-- 112
L + S G+ FVNY + A++A+ ELN ++ K + V A+ + E ++R
Sbjct: 269 LSVGED-GLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMH 327
Query: 113 -------------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLYV + + L + F GTI +++++ D +
Sbjct: 328 EERRLENESKTAGVNLYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKGA-------- 379
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
S+G GFV F+Q EA A+QE+NG + ++P+ V A R +AL +
Sbjct: 380 --------SRGFGFVCFSQPDEATRAVQEMNGKMI--GTKPLYVSLAQKKEVRRQALESQ 429
Query: 220 LNAQAAAMRHFAAA 233
+ + A +AAA
Sbjct: 430 MQQRNAQRLQYAAA 443
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L +F+ VG V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 56 SASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 115
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++N+ ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 116 EHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILSCK 175
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D+ + S+G FV + A+ A++ +NG +
Sbjct: 176 VATDENGN----------------SRGFAFVHYETGEAADAAIKSVNGML 209
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ + A+RAI +
Sbjct: 106 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 163
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 164 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 223
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A A++E+NG G
Sbjct: 224 LSVKVMTDPTGK----------------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 264
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 265 --KMVF----VGRAQ---KKVERQAELKRRFEQLKQ------ERISRYQ----------- 298
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 299 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 345
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 346 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 377
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LFS G+ S K++ D T +S G+GFV++ + EDA +A+
Sbjct: 197 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVE 255
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 256 EMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 315
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 316 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 358
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 359 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 400
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K I++ +++ PS N+++ L K + + L + F +G
Sbjct: 71 AERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 130
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ S KG FV F A+ A++++NG +
Sbjct: 131 ILSCKVVCDENGS-----------------KGYAFVHFETQDAADRAIEKMNGML----- 168
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 169 -----------LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------- 198
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L +LF +G +VKV+ DP T K KGFGFV
Sbjct: 199 ---------------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFV 242
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A++ +NG + +++ V
Sbjct: 243 SFEKHEDANKAVEEMNGKDINGKMVFV 269
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 145 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 202
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 203 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 262
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SKG GFV F +H +A A+ E+NG G
Sbjct: 263 LSVKVVTDESGK----------------SKGFGFVSFERHEDARKAVDEMNGKELNGKQ- 305
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 306 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 335
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 336 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVC 384
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 385 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 416
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA +A+
Sbjct: 236 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDES-GKSKGFGFVSFERHEDARKAVD 294
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 295 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 354
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 355 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 397
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 398 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 435
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 70/268 (26%)
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 109 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 168
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++CD+ SKG GFV F AE A++++NG +
Sbjct: 169 NILSCKVVCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML---- 207
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
K ++ A + F N
Sbjct: 208 ------------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------ 237
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+++ N + +D L LFG FG +VKVV D ++ K KGFGF
Sbjct: 238 ----------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVVTD-ESGKSKGFGF 280
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQV 345
V +++A A+ +NG L + + V
Sbjct: 281 VSFERHEDARKAVDEMNGKELNGKQIYV 308
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 15/181 (8%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NLI+N +P+ + E+L+ +F++ GE+ S K++ + ++++GYGFV Y E A AI
Sbjct: 153 TNLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEGATAAIE 212
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
++NG + K +KVSYA +S ANLYV+ L +T+EDL F +G ++ ++IL
Sbjct: 213 QMNGHSIDLKFLKVSYATATSSQSTHANLYVNRLEPQVTKEDLAEAFSKFGEVVETKILV 272
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D S+ +GFV F+ A A+ +NG + PI VKFA
Sbjct: 273 DPNTGS---------------SRCVGFVHFSARRNALTALSAMNGANIPCQTGPIYVKFA 317
Query: 207 N 207
+
Sbjct: 318 D 318
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 73/222 (32%)
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
NL ++ +PKH + EDL ++F +G I++ +++ + S+N+ G GF
Sbjct: 154 NLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNM---------------GYGF 198
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
V++ A A++++NG
Sbjct: 199 VKYATPEGATAAIEQMNG------------------------------------------ 216
Query: 234 MRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFG 293
HS KF ++ +S +S H + ++V L P+ L + F
Sbjct: 217 ---------HSIDLKFLKVSYATATSS----QSTHAN---LYVNRLEPQVTKEDLAEAFS 260
Query: 294 PFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
FG V K++ DP T + GFV + A+ A+ ++NG
Sbjct: 261 KFGEVVETKILVDPNTGSSRCVGFVHFSARRNALTALSAMNG 302
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 288 LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
L +F FG + + KVV K G+GFV + A AI+ +NG+++ + L+VS+
Sbjct: 169 LRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEGATAAIEQMNGHSIDLKFLKVSY 228
Query: 348 KT 349
T
Sbjct: 229 AT 230
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 138/332 (41%), Gaps = 67/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEK-GNSKGYGFVHFETEESANTSIEK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L+ +F YGTI
Sbjct: 150 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGDELNDETLKEMFEKYGTI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ R++ S +G GFV F AEHA+QELNG G +
Sbjct: 210 TSHRVMIKDGKS-----------------RGFGFVAFENPESAEHAVQELNGK-ELGEGK 251
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F L + L
Sbjct: 252 ILYV-------GRAQK----------------------KNERQMELKRRFEQLKMERLTR 282
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 283 Y---------QGVNLYVKNLDDSIDDERLRKEFSPFGTITSAKVMLEEG--RSKGFGFVC 331
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG +G + L V+ K
Sbjct: 332 FSAAEEATKAVTEMNGRIVGSKPLYVALAQRK 363
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 72/317 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K++ + + + F +G I++ ++
Sbjct: 62 TMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A +++++NG +
Sbjct: 122 AQDEKGN----------------SKGYGFVHFETEESANTSIEKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGRFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV-VRDPQTYKCKGFGFVCMTNY 323
++V N E D L ++F +G + + +V ++D K +GFGFV N
Sbjct: 185 ---------VYVKNFGDELNDETLKEMFEKYGTITSHRVMIKDG---KSRGFGFVAFENP 232
Query: 324 DEAVFAIQSLNGYALGD 340
+ A A+Q LNG LG+
Sbjct: 233 ESAEHAVQELNGKELGE 249
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 47/232 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCK-LIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+N+ V + E L+ +F G + S + +I+D +S G+GFV + E AE A+
Sbjct: 183 TNVYVKNFGDELNDETLKEMFEKYGTITSHRVMIKD---GKSRGFGFVAFENPESAEHAV 239
Query: 86 IELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQ 126
ELNG +L + K + V A+ +E +KR NLYV L +
Sbjct: 240 QELNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDD 299
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E L F P+GTI +++++ ++ SKG GFV F+ EA A+
Sbjct: 300 ERLRKEFSPFGTITSAKVMLEEGR-----------------SKGFGFVCFSAAEEATKAV 342
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFG 238
E+NG I S+P+ V A R LA+ + A MR M+H G
Sbjct: 343 TEMNGRIV--GSKPLYVALAQRKEDRKAHLASQYMQRMANMR-----MQHMG 387
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ E L+ FS G + S K++ ++ +S G+GFV + E+A +A
Sbjct: 284 QGVNLYVKNLDDSIDDERLRKEFSPFGTITSAKVMLEE--GRSKGFGFVCFSAAEEATKA 341
Query: 85 IIELNGLKLQNKSIKVSYA-RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
+ E+NG + +K + V+ A R A+ Y+ + +M + + +F+P G
Sbjct: 342 VTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQRMA-NMRMQHMGQIFQPGG 394
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG E + +
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFEKHEDAQKAVDEMNGK--ELSGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 260 QIYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + +GFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSRGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L VS K
Sbjct: 340 FSSPEEATKAVTEMNGIIVATKPLYVSLAHRK 371
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELSGKQIYV 263
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ + EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFEKHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R S+G GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SRGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A+ R L + A +R
Sbjct: 354 NGII--VATKPLYVSLAHRKEERQAYLTNEYMQRMAGVR 390
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 53 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 113 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 172
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A++A++ +NG +
Sbjct: 173 VAQDEFGN----------------SKGYGFVHYETAEAAQNAIKHVNGML---------- 206
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 207 ----------------LNDKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 236
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V N+ +T D +LF FG + + + RD ++ K +GFGFV T++
Sbjct: 237 ----------VYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSH 286
Query: 324 DEAVFAIQSLN 334
+ A A+ +LN
Sbjct: 287 ESAAAAVDNLN 297
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 57/252 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + Q T EE + LF GE+ S L RD + +S G+GFVN+ E A A+
Sbjct: 235 TNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVD 294
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +++ + V A+ E I++A NLY+ L + E
Sbjct: 295 NLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 354
Query: 129 LENLFRPYGTIITSRILCDKMASENV--------------------------RSFVSGTP 162
L +LF YGTI +++++ D +A+E+ ++ T
Sbjct: 355 LRDLFSGYGTITSAKVMRDNLAAESSSDSEKEAKSEGKENEPPEESKDEAAEKAETKDTK 414
Query: 163 E-----------IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
E + SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 415 EAKTESKKADKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDV 472
Query: 212 RAKALAANLNAQ 223
R L A++ A+
Sbjct: 473 RRSQLEASIQAR 484
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 144 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHV 202
Query: 334 NGYALGDR 341
NG L D+
Sbjct: 203 NGMLLNDK 210
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + L FS+ G + SCK++ D+ ++ G+GFV++ E AERAI +
Sbjct: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVCDENGSK--GHGFVHFETEEAAERAIEK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + + N+Y+ M + L LF +G +
Sbjct: 158 MNGMLLNDRKVFVGQFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNGLFGRFGQV 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDEGGK----------------SKGFGFVSFERHEDAQKAVDEMNGKELNGKH- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R H + KF +T D
Sbjct: 261 -IYVGPAQKKVDR-----------------------------HIELKRKFEQVTQD---- 286
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ + G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 287 -----RGIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVSEMNGRIVATKPLYVALAQRK 371
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 44/223 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M + L LF G+V S K++ D+ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEG-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR---------------------ANLYVSGLPKHMT 125
E+NG +L K I Y P+ + + R NLYV L +
Sbjct: 250 EMNGKELNGKHI---YVGPAQKKVDRHIELKRKFEQVTQDRGIRYQGINLYVKNLDDGID 306
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
E L+ F P+GTI +++++ +E R SKG GFV F+ EA A
Sbjct: 307 DERLQKEFSPFGTITSTKVM-----TEGGR------------SKGFGFVCFSSPEEATKA 349
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+ E+NG I A++P+ V A R L + A++R
Sbjct: 350 VSEMNGRIV--ATKPLYVALAQRKEERQAHLTNQYIQRMASVR 390
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G + S ++ RD T +SLGY VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGHGFVHFETEEAAERAIEKMNGML 162
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 101 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 158
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M + L+ LF YG
Sbjct: 159 MNGMLLNDRKVFVGRFKSRKEREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKT 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV + +H +A A++E+NGT G +
Sbjct: 219 LSVKVMTDPTGK----------------SRGFGFVSYEKHEDANKAVEEMNGTELNGKTV 262
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + QA R KF L + ++
Sbjct: 263 FV---------GRAQK---KMERQAELKR-------------------KFEQLKQERISR 291
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 292 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 340
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 341 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 372
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 12 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 71
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 72 TMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 131
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 132 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 164 -----LNDRKVFVGRFKSRKEREAEMGAKAKEFTN------------------------- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP T K +GFGFV ++
Sbjct: 194 ---------VYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDP-TGKSRGFGFVSYEKHE 243
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 244 DANKAVEEMNGTELNGKTVFV 264
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M + L+ LF G+ S K++ D T +S G+GFV+Y + EDA +A+
Sbjct: 192 TNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTD-PTGKSRGFGFVSYEKHEDANKAVE 250
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K++ V A+ E +KR NLY+ L + E
Sbjct: 251 EMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 310
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 311 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 353
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 354 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPA 395
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A++A++ +NG +
Sbjct: 174 VAQDEFGN----------------SKGYGFVHYETAEAAQNAIKHVNGML---------- 207
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 208 ----------------LNDKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 237
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V N+ +T + LF FG + + + RD ++ K +GFGFV T++
Sbjct: 238 ----------VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSH 287
Query: 324 DEAVFAIQSLN 334
D A A+++LN
Sbjct: 288 DNAAAAVEALN 298
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + Q T+EE + LF GE+ S L RD + +S G+GFVN+ ++A A+
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN + + + V A+ E I++A NLY+ L + E
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 355
Query: 129 LENLFRPYGTIITSRILCD-------------------------------------KMAS 151
L LF YGTI +++++ D K
Sbjct: 356 LRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNK 415
Query: 152 ENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
EN + SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 416 ENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHG--KPLYVALAQRKDV 473
Query: 212 RAKALAANLNAQ 223
R L A++ A+
Sbjct: 474 RRSQLEASIQAR 485
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHV 203
Query: 334 NGYALGDR 341
NG L D+
Sbjct: 204 NGMLLNDK 211
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A++A++ +NG +
Sbjct: 174 VAQDEFGN----------------SKGYGFVHYETAEAAQNAIKHVNGML---------- 207
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 208 ----------------LNDKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 237
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V N+ +T + LF FG + + + RD ++ K +GFGFV T++
Sbjct: 238 ----------VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSH 287
Query: 324 DEAVFAIQSLN 334
D A A+++LN
Sbjct: 288 DNAAAAVEALN 298
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + Q T+EE + LF GE+ S L RD + +S G+GFVN+ ++A A+
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN + + + V A+ E I++A NLY+ L + E
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 355
Query: 129 LENLFRPYGTIITSRILCD-------------------------------------KMAS 151
L LF YGTI +++++ D K
Sbjct: 356 LRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNK 415
Query: 152 ENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
EN + SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 416 ENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHG--KPLYVALAQRKDV 473
Query: 212 RAKALAANLNAQ 223
R L A++ A+
Sbjct: 474 RRSQLEASIQAR 485
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHV 203
Query: 334 NGYALGDR 341
NG L D+
Sbjct: 204 NGMLLNDK 211
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + +++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 58 SASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 117
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++N+ ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 118 EELNYTLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 177
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A+ A++ +NG +
Sbjct: 178 VAQDEHGN----------------SKGYGFVHYETDEAAQQAIKHVNGML---------- 211
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 212 ----------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANYTN----- 241
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ NL + D+ +LF +GAV + + RD +T K +GFGF+ T +
Sbjct: 242 ----------IYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTH 291
Query: 324 DEAVFAIQSLN 334
+ A A++ LN
Sbjct: 292 ESAAKAVEELN 302
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 54/260 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +T +E + LF G V S + RD+ T +S G+GF+N+ E A +A+
Sbjct: 240 TNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVE 299
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
ELN ++ + + V A R S EA ++ NLY+ L + E
Sbjct: 300 ELNSREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEVDDEK 359
Query: 129 LENLFRPYGTIITSRILCDKMASENV-----------------------------RSFVS 159
L LF PYG I +++++ + + + + S
Sbjct: 360 LRELFAPYGPITSAKVMRETASESDEEGKETKETEEVKEVKEEEEKPKVEGAAEGEADAS 419
Query: 160 GTPEI---PQI--SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
G + P++ SKG GFV F+ +A A+ E+N + G +P+ V A R
Sbjct: 420 GEKQAAARPKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVSG--KPLYVAIAQKKEVRKS 477
Query: 215 ALAANLNAQAAAMRHFAAAM 234
L A++ A+ AAA+
Sbjct: 478 QLEASIQARNTLRMQQAAAV 497
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IF+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 149 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EHGNSKGYGFVHYETDEAAQQAIKHV 207
Query: 334 NGYALGDRLLQVS 346
NG L ++ + V
Sbjct: 208 NGMLLNEKKVYVG 220
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A++A++ +NG +
Sbjct: 174 VAQDEFGN----------------SKGYGFVHYETAEAAQNAIKHVNGML---------- 207
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 208 ----------------LNDKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 237
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V N+ +T + LF FG + + + RD ++ K +GFGFV T++
Sbjct: 238 ----------VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSH 287
Query: 324 DEAVFAIQSLN 334
D A A+++LN
Sbjct: 288 DNAAAAVEALN 298
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + Q T+EE + LF GE+ S L RD + +S G+GFVN+ ++A A+
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN + + + V A+ E I++A NLY+ L + E
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 355
Query: 129 LENLFRPYGTIITSRILCD-------------------------------------KMAS 151
L LF YGTI +++++ D K
Sbjct: 356 LRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNK 415
Query: 152 ENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG 211
EN + SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 416 ENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHG--KPLYVALAQRKDV 473
Query: 212 RAKALAANLNAQ 223
R L A++ A+
Sbjct: 474 RRSQLEASIQAR 485
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHV 203
Query: 334 NGYALGDR 341
NG L D+
Sbjct: 204 NGMLLNDK 211
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G V SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENG--SKGYGFVHFETREAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGIPLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDQ----------SGK------SKGFGFVSFEKHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KCKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G +++ ++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG IP + +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETREAAERAIEKMNG-IPLNDRKVFVGR 172
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
F + K A L A+A + F N
Sbjct: 173 FKSR-----KEREAELGARA----------KEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D Q+ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTD-QSGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ FS G + S K++ + +S G+GFV + E+A +A
Sbjct: 292 QVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVATKPLYVALAQRKEE 373
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + + L F++ G V SCK+ D+ +S GYGFV+Y E AE AI
Sbjct: 95 GNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAAETAIK 153
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L +K + V + E + N+YV + +TQE+ LF P+G
Sbjct: 154 AVNGMLLNDKKVYVGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGR 213
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ + D S+G GFV F+ H EA A++ L+ + +G
Sbjct: 214 ITSAVLQVDDEGK----------------SRGFGFVNFDTHEEAHAAVEALHDSDVKGRK 257
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L R + A + ++++
Sbjct: 258 --LFVARAQKKAEREEEL----------RRSYEQAK------MEKMSKYQ---------- 289
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +++ NL + +D L F PFG + + KV+RD + KGFGFV
Sbjct: 290 ------------GVNLYIKNLEDDIDDERLRGEFEPFGNITSAKVMRDEKGI-SKGFGFV 336
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ DEA A+ +N +G + L VS +
Sbjct: 337 CFSSPDEATKAVAEMNNKMIGTKPLYVSLAQRR 369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 6 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 65
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ ++ ++ +++ P+ + N+++ L + + + L + F +G +++ +
Sbjct: 66 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 125
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D+ SKG GFV + AE A++ +NG +
Sbjct: 126 VATDEHGR----------------SKGYGFVHYETAEAAETAIKAVNGML 159
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 41/254 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNE---QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS + E Q +N+ V V +TQEE LF G + S
Sbjct: 159 LLNDKKVYVGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAV 218
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---AIKRA- 113
L D +S G+GFVN+ E+A A+ L+ ++ + + V+ A+ +E ++R+
Sbjct: 219 LQVD-DEGKSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKAEREEELRRSY 277
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLY+ L + E L F P+G I +++++ D+
Sbjct: 278 EQAKMEKMSKYQGVNLYIKNLEDDIDDERLRGEFEPFGNITSAKVMRDEKG--------- 328
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
ISKG GFV F+ EA A+ E+N + ++P+ V A R + L +
Sbjct: 329 -------ISKGFGFVCFSSPDEATKAVAEMNNKMI--GTKPLYVSLAQRREVRRQQLESQ 379
Query: 220 LNAQAAAMRHFAAA 233
+ AQ +R AA
Sbjct: 380 I-AQRNQIRMQQAA 392
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 65/319 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + +T+ + L FS+ G + SCK++ D+ ++ GYGFV+Y E AE AI
Sbjct: 133 GNVFIKNLDKTIDNKALLDTFSAFGNILSCKVVTDENGSK--GYGFVHYETQEAAETAIA 190
Query: 87 ELNGLKLQNKSIKVSYARPSSEAI-------KRANLYVSGLPKHMTQEDLENLFRPYGTI 139
++NG+ + K + V P E + K N++V LP+ T L ++F +G I
Sbjct: 191 KVNGMVINGKQVFVGIFVPRKERVELGEGVTKFTNVFVKNLPEDTTDAALNDMFSKFGKI 250
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ I+ +S++ + SKG GFV + + +A+ A+ LNGT E A +
Sbjct: 251 TSVVIM---KSSDDDK------------SKGFGFVCYEKVEDAQAAVNALNGT--ELAGK 293
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R A L + A+R L +++
Sbjct: 294 TLFVARAQKKAER----EAELKQRYDALR------------LERINKYQ----------- 326
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +++ + F PFG + +VK++RD + K +GFGF+C
Sbjct: 327 -----------GINLYVKNLDDAIDEDKIRTEFAPFGTITSVKIMRD-EKGKSRGFGFIC 374
Query: 320 MTNYDEAVFAIQSLNGYAL 338
++ +EA A+ +NG +
Sbjct: 375 FSSAEEATKAVTEMNGQTI 393
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P+ T L +FS G++ S +++ +S G+GFV Y + EDA+ A+
Sbjct: 224 TNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVN 283
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG +L K++ V+ A+ +E + NLYV L + ++
Sbjct: 284 ALNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDEDK 343
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
+ F P+GTI + +I+ D+ S+G GF+ F+ EA A+ E
Sbjct: 344 IRTEFAPFGTITSVKIMRDEKGK----------------SRGFGFICFSSAEEATKAVTE 387
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAM 227
+NG +G +P+ V A R LAA+ Q M
Sbjct: 388 MNGQTIQGFPKPLYVALAQRAEDRRAQLAAHFAQQRGNM 426
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ +L V + +T+ +L +F+++G V S ++ RD T +SLGY +VN++ DAERA+
Sbjct: 44 SGSLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERAL 103
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ K ++ +++ P+ N+++ L K + + L + F +G I++ +
Sbjct: 104 DTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILSCK 163
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
++ D+ SKG GFV + AE A+ ++NG + G
Sbjct: 164 VVTDENG-----------------SKGYGFVHYETQEAAETAIAKVNGMVING 199
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 62/280 (22%)
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
+LYV L +T+ L +F G +++ R+ D I + S G
Sbjct: 45 GSLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDA---------------ITRRSLGYA 89
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN-SPAGRAKALA----ANLNA---QA 224
+V F+ ++AE A+ LN ++ G +P + ++ PA R L NL+
Sbjct: 90 YVNFHAAVDAERALDTLNYSLIRG--KPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNK 147
Query: 225 AAMRHFAAAMRHFGNPL---------------------HHSARFKFAPLTADLLNN---- 259
A + F+A FGN L +A A + ++N
Sbjct: 148 ALLDTFSA----FGNILSCKVVTDENGSKGYGFVHYETQEAAETAIAKVNGMVINGKQVF 203
Query: 260 -SMLPPKSLH---GSGWC----IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYK 311
+ P+ G G +FV NL +T D L +F FG + +V +++ K
Sbjct: 204 VGIFVPRKERVELGEGVTKFTNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDK 263
Query: 312 CKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
KGFGFVC ++A A+ +LNG L + L V+ K
Sbjct: 264 SKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQKK 303
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 140/334 (41%), Gaps = 66/334 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+ S GYGFV+Y E AE AI
Sbjct: 131 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEH-GNSKGYGFVHYETAEAAENAIKS 189
Query: 88 LNGLKLQNKSIKVS-----YARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V R S RA NLYV + +T E+ ENLF+ YG +
Sbjct: 190 VNGMLLNDKKVYVGPHISRKERQSKIDEMRAHFTNLYVKNIDPEVTDEEFENLFKQYGQV 249
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+S + D + G GFV F H EA+ A+ L+ + G
Sbjct: 250 QSSLLKRDDQGR----------------NLGFGFVNFETHEEAQKAVDALHESDFHGRK- 292
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R L R ++ + +N
Sbjct: 293 -LYVARAQKKAEREAEL-----------------------------RKQYDQARQERMNK 322
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL + +D L F PFG + + +V+RD + K KGFGFVC
Sbjct: 323 Y---------QGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCRVMRD-ERGKSKGFGFVC 372
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
+ DEA A+ +N +G + L VS K +
Sbjct: 373 YSAPDEATKAVAEMNNKMIGSKPLYVSLAQRKEI 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 41 SASLYVGELDPTVTESMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 100
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++N+ ++ +++ P+ + N+++ L + + + L + F +G +++ +
Sbjct: 101 EQLNYSSIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 160
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D+ + SKG GFV + AE+A++ +NG +
Sbjct: 161 VATDEHGN----------------SKGYGFVHYETAEAAENAIKSVNGML 194
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 41/249 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS ++E +NL V + +T EE ++LF G+V+S
Sbjct: 194 LLNDKKVYVGPHISRKERQSKIDEMRAHFTNLYVKNIDPEVTDEEFENLFKQYGQVQSSL 253
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE--------- 108
L RD ++LG+GFVN+ E+A++A+ L+ + + V+ A+ +E
Sbjct: 254 LKRD-DQGRNLGFGFVNFETHEEAQKAVDALHESDFHGRKLYVARAQKKAEREAELRKQY 312
Query: 109 ---------AIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
+ NLY+ L + E L F P+GTI + R++ D+
Sbjct: 313 DQARQERMNKYQGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCRVMRDERGK-------- 364
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV ++ EA A+ E+N + S+P+ V A R + L +
Sbjct: 365 --------SKGFGFVCYSAPDEATKAVAEMNNKMI--GSKPLYVSLAQRKEIRRQQLESQ 414
Query: 220 LNAQAAAMR 228
+ AQ +R
Sbjct: 415 I-AQRQQLR 422
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDP----------SGK------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKRKFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +NG +G + L V+ K
Sbjct: 340 FSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKDINGKMVFV 263
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M L+ LFS G+ S K++ D + +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPDEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRI--VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 138/333 (41%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+ S GYGFV+Y E AE AI
Sbjct: 136 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEH-GNSKGYGFVHYETAEAAENAIKS 194
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + P E + N+YV L + QE E LF +G I
Sbjct: 195 VNGMLLNDKKVFVGHHIPRKERQSKIDEMKAQYTNIYVKNLDPELGQEGFEELFGKFGNI 254
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ + D+ S+G GFV F H +A A++ L+ T G
Sbjct: 255 TSAALSKDEEGK----------------SRGFGFVNFESHEQAAAAVETLHDTEINGRK- 297
Query: 200 PITVKFANSPAGRAKALAANL-NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A + R L + NA+ + +
Sbjct: 298 -LYVARAQKKSEREDELRKSYENAKQEKLSKY---------------------------- 328
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +++ NL + +D L F PFG + + KV+RD + KGFGFV
Sbjct: 329 -----------QGVNLYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRDEKN-TSKGFGFV 376
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ DEA A+ +N +G + L VS +
Sbjct: 377 CFSSPDEATKAVSEMNNKMIGSKPLYVSLAQRR 409
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
+L V + ++T+ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+ +
Sbjct: 48 SLYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQ 107
Query: 88 LNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LN ++N++ ++ +++ P+ + N+++ L + + + L + F +G +++ ++
Sbjct: 108 LNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVA 167
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D+ + SKG GFV + AE+A++ +NG +
Sbjct: 168 TDEHGN----------------SKGYGFVHYETAEAAENAIKSVNGML 199
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 15 RSTYQSDVNE---QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
R QS ++E Q +N+ V + + QE + LF G + S L +D+ +S G+G
Sbjct: 213 RKERQSKIDEMKAQYTNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEE-GKSRGFG 271
Query: 72 FVNYYRTEDAERAI-----IELNGLKL-----QNKSIKVSYARPSSEAIKR--------A 113
FVN+ E A A+ E+NG KL Q KS + R S E K+
Sbjct: 272 FVNFESHEQAAAAVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGV 331
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
NLY+ L + E L F P+GTI + +++ D+ + SKG GF
Sbjct: 332 NLYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRDEKNT----------------SKGFGF 375
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
V F+ EA A+ E+N + S+P+ V A R + L + AQ +R AA
Sbjct: 376 VCFSSPDEATKAVSEMNNKMI--GSKPLYVSLAQRREVRRQQLETQI-AQRNQIRMQQAA 432
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A++++NG G
Sbjct: 218 LSVKVMTDP----------SGK------SKGFGFVSFEKHEDANQAVEDMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R KF L + ++
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANQAVEDMNGKDINGKMVFV 263
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LFS G+ S K++ D + +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHEDANQAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 DMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRI--VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDP----------SGK------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKRKFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +NG +G + L V+ K
Sbjct: 340 FSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKDINGKMVFV 263
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M L+ LFS G+ S K++ D + +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPDEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRI--VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 65/334 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N N+ + + ++ + L FS+ G + SCK+ D+ S GYGFV+Y E AE AI
Sbjct: 115 NGNIFIKNLDPSIDHKALHDTFSAFGNILSCKIAHDEQ-GNSKGYGFVHYETLEAAESAI 173
Query: 86 IELNGLKLQNKSIKVSY--ARPSSEA------IKRANLYVSGLPKHMTQEDLENLFRPYG 137
+NG+ L ++ + V + +R E+ ++ N+YV +P +T E+L LF YG
Sbjct: 174 KSVNGMLLNDRKVFVGHHISRKERESKLGESRVQFTNIYVKNIPFDVTDEELSQLFGKYG 233
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
TI + I D GT SKG GFV F +H +A++A+ +L+ G
Sbjct: 234 TITSCVITRDD----------DGT------SKGFGFVNFEKHQDAQNAVDDLHKKDFRG- 276
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
+ + V A R + L R + A L ++++
Sbjct: 277 -QDLYVSRAQKKNEREEEL----------RRQYEEAK------LEKMSKYQ--------- 310
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G ++V NL + +D+ L F +G + + K++RD +T +GFGF
Sbjct: 311 -------------GVNLYVKNLDDDMDDDRLRDEFSVYGVITSAKIMRDEKTNISRGFGF 357
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC T+ ++A A+ +NG +G + + V+ K
Sbjct: 358 VCFTSPEDATRAVTEMNGRIIGSKPIYVAIAQRK 391
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L +F+ +G V S ++ RD T +SLGY +VN++R DAERA+
Sbjct: 27 SASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAERAL 86
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ +S ++ +++ PS N+++ L + + L + F +G I++ +
Sbjct: 87 ETLNYSMIKGRSCRIMWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHDTFSAFGNILSCK 146
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
I D+ + SKG GFV + AE A++ +NG +
Sbjct: 147 IAHDEQGN----------------SKGYGFVHYETLEAAESAIKSVNGML 180
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 40/245 (16%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
++ ++ R + + Q +N+ V +P +T EEL LF G + SC + RD S
Sbjct: 190 HHISRKERESKLGESRVQFTNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDD-DGTS 248
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKR------------ 112
G+GFVN+ + +DA+ A+ +L+ + + + VS A+ + E ++R
Sbjct: 249 KGFGFVNFEKHQDAQNAVDDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSK 308
Query: 113 ---ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
NLYV L M + L + F YG I +++I+ D E IS+
Sbjct: 309 YQGVNLYVKNLDDDMDDDRLRDEFSVYGVITSAKIMRD---------------EKTNISR 353
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH 229
G GFV F +A A+ E+NG I S+PI V A R + + L Q A
Sbjct: 354 GFGFVCFTSPEDATRAVTEMNGRII--GSKPIYVAIAQ----RKEVRRSQLEIQMAQRNQ 407
Query: 230 FAAAM 234
AM
Sbjct: 408 LKQAM 412
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
P G+ IF+ NL P + L F FG + + K+ D Q KG+GFV
Sbjct: 108 PSLRKGNNGNIFIKNLDPSIDHKALHDTFSAFGNILSCKIAHDEQG-NSKGYGFVHYETL 166
Query: 324 DEAVFAIQSLNGYALGDR 341
+ A AI+S+NG L DR
Sbjct: 167 EAAESAIKSVNGMLLNDR 184
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E A RAI
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDEKGSK--GYGFVHFETQEAANRAIET 157
Query: 88 LNGLKLQNKSIKVSYARP--------SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + S+A+K N+Y+ + T E L+ +F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D+ S+G GFV + H +A+ A+ E+NG G
Sbjct: 218 LSVRVMKDEKGR----------------SRGFGFVNYAHHEDAQKAVNEMNGKEINGKIL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ L Q R KF + D +
Sbjct: 262 YV---------GRAQ---KRLERQGELKR-------------------KFDQIKQDRIQR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ D + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGS--QSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ +
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 38/226 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + T E+L+ +FS+ G S ++++D+ +S G+GFVNY EDA++A+
Sbjct: 191 TNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEK-GRSRGFGFVNYAHHEDAQKAVN 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K + V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDSIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ D SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFAPYGTITSAKVMTDGSQ-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
+NG I A++P+ V A R L + A +R A+ +
Sbjct: 353 MNGRIV--ATKPLYVALAQRREERKAILTNKYMQRLATLRTMASPL 396
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ + + + + L + F +G I++ ++
Sbjct: 71 TMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A A++ +NG +
Sbjct: 131 VCDEKG-----------------SKGYGFVHFETQEAANRAIETMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + +F N
Sbjct: 163 ---------------LNDRKVFVGHFKS---------RKEREVEFGSKAMKFTN------ 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + D L ++F FG +V+V++D + + +GFGFV +++
Sbjct: 193 ---------VYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKD-EKGRSRGFGFVNYAHHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + ++L V
Sbjct: 243 DAQKAVNEMNGKEINGKILYV 263
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V +L P+ + +L+Q F P G + +++V RD T + G+ +V +A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALDT 71
Query: 333 LNGYALGDRLLQVSFKTHKP 352
+N + R +++ + P
Sbjct: 72 MNYDVIKGRPIRIMWSQRDP 91
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A++E+NG G
Sbjct: 218 LSVKVMTDP----------SGK------SKGFGFVSFEKHEDANKAVEEMNGKDING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 259 --KMVFV----GRAQK---KVERQAELKRKFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +NG +G + L V+ K
Sbjct: 340 FSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKDINGKMVFV 263
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M L+ LFS G+ S K++ D + +S G+GFV++ + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPDEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRI--VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG E + +
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFEKHEDAQKAVDEMNGK--ELSGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 260 QIYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELSGKQIYV 263
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ + EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFEKHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV + +H +A A++++NGT G +
Sbjct: 218 LSVKVMMDPTGK----------------SRGFGFVSYEKHEDANKAVEDMNGTELNGKTV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + A ++ KF L + ++
Sbjct: 262 FV---------GRAQ----KKNERQAELKR------------------KFEMLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP T K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 243 DANKAVEDMNGTELNGKTVFV 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LF G+ S K++ D T +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L K++ V A+ +E +KR NLY+ L + E
Sbjct: 250 DMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPA 394
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ M E L+ LF YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV + +H +A A++++NGT G +
Sbjct: 218 LSVKVMMDPTGK----------------SRGFGFVSYEKHEDANKAVEDMNGTELNGKTV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + A ++ KF L + ++
Sbjct: 262 FV---------GRAQ----KKNERQAELKR------------------KFEMLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LF +G +VKV+ DP T K +GFGFV ++
Sbjct: 193 ---------VYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 243 DANKAVEDMNGTELNGKTVFV 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ LF G+ S K++ D T +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L K++ V A+ +E +KR NLY+ L + E
Sbjct: 250 DMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPA 394
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 66/334 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ N+ + + + + L FS G + SCK+ D+T +S G+GFV++ E A AI
Sbjct: 130 SGNIFIKNLHPDIDNKTLYETFSVFGNILSCKIANDET-GKSKGFGFVHFENEEAAREAI 188
Query: 86 IELNGLKLQNKSIKVS-----YARPSSEAIKRAN---LYVSGLPKHMTQEDLENLFRPYG 137
+NG+ L + + V+ R S RAN +YV L T+ED ENLF+PYG
Sbjct: 189 DAINGMLLNGQEVYVAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYG 248
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
TI + + D S+G GFV F H +A A++ LN T +G
Sbjct: 249 TITSVALEKDAEGK----------------SRGFGFVDFENHEDAVKAVEALNDTEYKGQ 292
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
+ + V A R + L A + L A+++
Sbjct: 293 T--LYVGRAQKKYERLQELKKQYQA----------------SKLEKLAKYQ--------- 325
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G +F+ NL +D L + F PFG + + +V+R + K KGFGF
Sbjct: 326 -------------GINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMRT-ENGKSKGFGF 371
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC + +EA AI N + + L V+ K
Sbjct: 372 VCFSTPEEATRAITEKNQQIVAGKPLYVAIAQRK 405
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 40/244 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQ---TMTQEELQHLFSSVGEVESCK 57
++ +E+Y + QS ++E +N YV T+E+ ++LF G + S
Sbjct: 195 LLNGQEVYVAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVA 254
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR----- 112
L +D +S G+GFV++ EDA +A+ LN + + +++ V A+ E ++
Sbjct: 255 LEKD-AEGKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERLQELKKQY 313
Query: 113 -------------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NL++ L + E L+ F P+GTI ++R+ M +EN +
Sbjct: 314 QASKLEKLAKYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARV----MRTENGK---- 365
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV F+ EA A+ E N I G +P+ V A R LA
Sbjct: 366 --------SKGFGFVCFSTPEEATRAITEKNQQIVAG--KPLYVAIAQRKDVRRSQLAQQ 415
Query: 220 LNAQ 223
+ A+
Sbjct: 416 IQAR 419
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
+V ++L V + ++++ L +FS +G V S ++ RD T SLGY +VN+ E
Sbjct: 37 NVENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEA 96
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
+ AI +LN ++ + ++ +++ PS N+++ L + + L F +G
Sbjct: 97 GKTAIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKTLYETFSVFGN 156
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
I++ +I D+ SKG GFV F A A+ +NG + G
Sbjct: 157 ILSCKIANDETGK----------------SKGFGFVHFENEEAAREAIDAINGMLLNG 198
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
P GSG IF+ NL P+ ++ L++ F FG + + K+ D +T K KGFGFV N
Sbjct: 123 PSMRKKGSG-NIFIKNLHPDIDNKTLYETFSVFGNILSCKIAND-ETGKSKGFGFVHFEN 180
Query: 323 YDEAVFAIQSLNGYALGDRLLQVS 346
+ A AI ++NG L + + V+
Sbjct: 181 EEAAREAIDAINGMLLNGQEVYVA 204
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L+ +F P G+V +++V RD T G+ +V +++ AI+
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 103
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN A+ R ++ + P
Sbjct: 104 LNYTAIKGRPCRIMWSQRDP 123
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 66/334 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ N+ + + + + L FS+ GEV SCK+ D+ S G+GFV++ DA+ AI
Sbjct: 137 SGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDEN-GNSRGFGFVHFKEESDAKDAI 195
Query: 86 IELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYG 137
+NG+ + + V+ P + I + N+YV + T E+ E LF YG
Sbjct: 196 EAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYG 255
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I+++ + D G P KG GFV F H A A++ELNG E
Sbjct: 256 EIVSAALEKD----------AEGKP------KGFGFVNFVDHNAAAKAVEELNGK--EFK 297
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
S+ + V A RA+ L Q R L A+F+
Sbjct: 298 SQALYVGRAQKKYERAE----ELKKQYEQYR------------LEKLAKFQ--------- 332
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G +F+ NL +D L + F P+G + + +V+RD Q KGFGF
Sbjct: 333 -------------GVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRD-QEGNSKGFGF 378
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC ++ +EA A+ N + + L V+ K
Sbjct: 379 VCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRK 412
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + T EE + LFS GE+ S L +D + G+GFVN+ A +A+
Sbjct: 231 TNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKD-AEGKPKGFGFVNFVDHNAAAKAVE 289
Query: 87 ELNGLKLQNKSIKVSYARPS---SEAIKR---------------ANLYVSGLPKHMTQED 128
ELNG + +++++ V A+ +E +K+ NL++ L + E
Sbjct: 290 ELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEK 349
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ F PYGTI ++R++ D+ + SKG GFV F+ EA AM E
Sbjct: 350 LKEEFAPYGTITSARVMRDQEGN----------------SKGFGFVCFSSPEEATKAMTE 393
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQ 223
N I G +P+ V A R LA + A+
Sbjct: 394 KNQQIVAG--KPLYVAIAQRKDVRRSQLAQQIQAR 426
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 22 VNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA 81
V N++L V + +T+ L +FS +G + S ++ RD T SLGY +VNY E
Sbjct: 45 VENNNASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAG 104
Query: 82 ERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
++AI ELN ++ + ++ ++ P+ N+++ L + + L F +G +
Sbjct: 105 KKAIQELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEV 164
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
++ ++ D+ + S+G GFV F + +A+ A++ +NG + G
Sbjct: 165 LSCKVALDENGN----------------SRGFGFVHFKEESDAKDAIEAVNGMLMNG 205
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L+ +F P G + +++V RD T G+ +V T+Y+ AIQ
Sbjct: 51 SLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQE 110
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 111 LNYAEINGRPCRIMWSERDP 130
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
GSG IF+ NL P ++ L + F FG V + KV D + +GFGFV +A
Sbjct: 136 GSG-NIFIKNLHPAIDNKALHETFSTFGEVLSCKVALD-ENGNSRGFGFVHFKEESDAKD 193
Query: 329 AIQSLNGYALGDRLLQVSFKTHKP 352
AI+++NG + L+V H P
Sbjct: 194 AIEAVNGMLMNG--LEVYVAMHVP 215
>gi|159162195|pdb|1D9A|A Chain A, Solution Structure Of The Second Rna-Binding Domain (Rbd2)
Of Hu Antigen C (Huc)
Length = 85
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 15/98 (15%)
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
ANLYVSGLPK M+Q+++E LF YG IITSRIL D+ +S+G+G
Sbjct: 2 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG---------------VSRGVG 46
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
F+RF++ IEAE A++ LNG P GA+EPITVKFAN+P+
Sbjct: 47 FIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPS 84
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
++NL V+ +P+TM+Q+E++ LFS G + + +++ D+ T S G GF+ + + +AE AI
Sbjct: 1 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAI 60
Query: 86 IELNGLK 92
LNG K
Sbjct: 61 KGLNGQK 67
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 47/329 (14%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K++ + + + F +G I++ ++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A ++ ++NG + G
Sbjct: 131 AQDESGA----------------SKGYGFVHFETEEAANKSIDKVNGMLLNG-------- 166
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL--HHSARFKFAPLTADLLNNSML 262
K + + + F N + + KF L + LN
Sbjct: 167 --------KKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFELKRKFEQLKIERLNRY-- 216
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC +
Sbjct: 217 -------QGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME--EGRSKGFGFVCFSQ 267
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A+ +NG +G + L V+ K
Sbjct: 268 PEEATKAVTEMNGRIVGSKPLYVALAQRK 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 55/236 (23%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D++ A S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGA-SKGYGFVHFETEEAANKSIDK 158
Query: 88 LNGLKLQNKSIKVSYARPSSE--------------------AIKR--------------- 112
+NG+ L K + V P E +KR
Sbjct: 159 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFELKRKFEQLKIERLNRYQG 218
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NLYV L + E L F P+GTI +++++ ++ SKG G
Sbjct: 219 VNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEEGR-----------------SKGFG 261
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
FV F+Q EA A+ E+NG I S+P+ V A R LA+ + A +R
Sbjct: 262 FVCFSQPEEATKAVTEMNGRIV--GSKPLYVALAQRKEDRKAHLASQYMQRMANVR 315
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 68/328 (20%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+ +++ S S +++L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 37 DGSETPNSAAPSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 96
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ K ++ +++ P+ + N+++ L +
Sbjct: 97 GYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 156
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D+ + SKG GFV + A +A+
Sbjct: 157 KALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAATNAI 200
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H A +
Sbjct: 201 KHVNGML--------------------------LNEKKVFVGHHIA---------KKDRQ 225
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + A+ N ++V NL E + +LFG +G + + + D
Sbjct: 226 SKFEEMKANFTN---------------VYVKNLDTEVTNEEFRELFGKYGDITSASITHD 270
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+T K +GFGFV ++ A A++ LN
Sbjct: 271 SETGKSRGFGFVNFVKHESAAAAVEELN 298
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 112/275 (40%), Gaps = 56/275 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF G++ S + D T +S G+GFVN+ + E A A+
Sbjct: 236 TNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVE 295
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
ELN + + + + V A+ E +++A NLYV L + E
Sbjct: 296 ELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEK 355
Query: 129 LENLFRPYGTIITSRILCDKMAS--------------ENV-------------------- 154
L +LF +G I ++R++ D +A ENV
Sbjct: 356 LRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSDKA 415
Query: 155 -RSFVSGTPEIP-QISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGR 212
+S T E SKG GFV F+ EA A+ E+N + G +P+ V A R
Sbjct: 416 EKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVR 473
Query: 213 AKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
L A++ A+ + AA P A +
Sbjct: 474 KSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 508
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 203
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 204 NGMLLNEK 211
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 68/322 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 57 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 116
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 117 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 176
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 177 VAQDEYGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 210
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 211 ----------------LNEKKVFVGH------HIAKKDRQS---KFEEMKANFTN----- 240
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D LF +G + + + RD +T K +GFGFV +++
Sbjct: 241 ----------IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A+++LN Y L + L V
Sbjct: 291 EAASAAVEALNEYELKGQKLYV 312
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 97/242 (40%), Gaps = 64/242 (26%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF GE+ S L RD T +S G+GFVN+ E A A+
Sbjct: 239 TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 298
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 299 ALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 358
Query: 129 LENLFRPYGTIITSRILC----------------------------------------DK 148
L LF YG I +++++ DK
Sbjct: 359 LRELFSSYGNITSAKVMREAIVDAPAEAEKDKEADKEKAKKEAGDKSEEKGEAKSESEDK 418
Query: 149 MASENVR--SFVSGTPEIPQI--SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
SE S PE + SKG GFV F+ EA A+ E+N + G +P+ V
Sbjct: 419 SKSEEKTEGKTESAKPEKKHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHG--KPLYVA 476
Query: 205 FA 206
A
Sbjct: 477 LA 478
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L FSS G + SCK+I D ++ GYGFV++ E AERAI +
Sbjct: 199 NVFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGSK--GYGFVHFEHRESAERAIQK 256
Query: 88 LNGLKLQNKSIKVSY--ARPSSEAIKRA------NLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + I V + +R E+ A N+Y+ + M ++ L +F +G
Sbjct: 257 MNGILLNDLKIFVGHFKSRKDRESELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPT 316
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A++A+ +NG G
Sbjct: 317 LSVKVMRDDCGR----------------SKGFGFVNFQKHEDAQNAIDNMNGKELNG--- 357
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
AGRA+ L Q RHF L N
Sbjct: 358 ------RQIYAGRAQ---KKLERQTQLQRHF-----------------------EQLKQN 385
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ + G +++ NL + +D L + F FG + + KV+ + + KGFGFVC
Sbjct: 386 RI-----VRYQGVNLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMN--NGRSKGFGFVC 438
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + + L V+ K
Sbjct: 439 FSAPEEATTAVTEMNGRLVASKPLYVALAQRK 470
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N ++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ DAE
Sbjct: 106 NSTMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAE 165
Query: 83 RAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
R + ++N ++ K +++ +++ PS N++V L K + + L + F +G I+
Sbjct: 166 RVMTDMNLYIIKGKPVRLMWSQRDPSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFGNIL 225
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ +++ D SKG GFV F AE A+Q++NG +
Sbjct: 226 SCKVITDDNG-----------------SKGYGFVHFEHRESAERAIQKMNGIL------- 261
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
K + ++ A R F N
Sbjct: 262 ---------LNDLKIFVGHFKSRKDRESELGAQTREFTN--------------------- 291
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
+++ N + +++ L ++F FG +VKV+RD + KGFGFV
Sbjct: 292 -------------VYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRD-DCGRSKGFGFVNF 337
Query: 321 TNYDEAVFAIQSLNGYALGDR 341
+++A AI ++NG L R
Sbjct: 338 QKHEDAQNAIDNMNGKELNGR 358
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 57/264 (21%)
Query: 15 RSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
R +S++ Q +N+ + + M ++ L +F G S K++RD +S G+G
Sbjct: 275 RKDRESELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDC-GRSKGFG 333
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR------------------- 112
FVN+ + EDA+ AI +NG +L + I YA + + ++R
Sbjct: 334 FVNFQKHEDAQNAIDNMNGKELNGRQI---YAGRAQKKLERQTQLQRHFEQLKQNRIVRY 390
Query: 113 --ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKG 170
NLY+ L + E+L F +GTI +++++ + N R SKG
Sbjct: 391 QGVNLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMN-----NGR------------SKG 433
Query: 171 IGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHF 230
GFV F+ EA A+ E+NG + AS+P+ V A R LA + A +R
Sbjct: 434 FGFVCFSAPEEATTAVTEMNGRLV--ASKPLYVALAQRKEERKAHLANQYVQRMARIRST 491
Query: 231 A----------AAMRHFGNPLHHS 244
A A+ R+F PL S
Sbjct: 492 ATPTLGPYRTGASSRYFFTPLTQS 515
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 238 GNPLHHSARFK-------FAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQ 290
G HH +R F P +A + + P S + + ++V +L E + +L++
Sbjct: 69 GRRHHHGSRLHLRPYCCGFGPRSATASQHVLNVPNSPNSTMASLYVGDLHHEVTEAMLYE 128
Query: 291 LFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTH 350
F P G + +++V RD T++ G+ +V + +A + +N Y + + +++ +
Sbjct: 129 KFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMTDMNLYIIKGKPVRLMWSQR 188
Query: 351 KP 352
P
Sbjct: 189 DP 190
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SRGYGFVHFETHDAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A R F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAREFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++F FG +V+V+ D ++ +GFGFV N++
Sbjct: 193 ---------VYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L R++ V
Sbjct: 243 DAQKAVDEMNGKELNGRIMFV 263
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ + AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SRGYGFVHFETHDAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ +F +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ R++ D+ +G GFV F H +A+ A+ E+NG G
Sbjct: 218 TSVRVMTDESGG----------------GRGFGFVSFENHEDAQKAVDEMNGKELNG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + Q R F
Sbjct: 259 --RIMFV----GRAQK---KMERQMELKRRF----------------------------E 281
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
M ++ G ++V NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 282 QMKQDRTTRYQGVNLYVKNLDDGIDDERLRKEFSPFGSITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E+L+ +FS G S +++ D++ G+GFV++ EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGG-GRGFGFVSFENHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L + + V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I A++P+ V A
Sbjct: 353 MNGRIV--ATKPLYVALA 368
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 70/331 (21%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T L +F S+G VE CKLIR + ++ +GFV+YY A AI+ LNG +L +
Sbjct: 88 VTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRSAALAIVSLNGRQLFGQP 143
Query: 98 IKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
IKV++A S++ + N++V L +T L F Y T +R++ D+
Sbjct: 144 IKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGR-- 201
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAG--- 211
S+G GFV F +A+ A+ ELNG + I +A A
Sbjct: 202 -------------SRGFGFVSFRNQQDAQTAINELNGKWL--GNRQIRCNWATKGANAGE 246
Query: 212 -----RAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKS 266
+K + +N + A + A NP + +
Sbjct: 247 EKQNTDSKGMVELINGSSEAGKENANEDGPENNPQYTT---------------------- 284
Query: 267 LHGSGWCIFVYNLAPETEDNVLWQLFGPFGA--VQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL + N + + F GA ++ V+V RD KGFGFV + ++
Sbjct: 285 -------VYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHE 331
Query: 325 EAVFAIQSLNGYALGDRLLQVSFKTHKPLPP 355
EA AIQ+ NG +G R ++ S+ + KP PP
Sbjct: 332 EAALAIQTGNGQLVGGRQIKCSWGS-KPTPP 361
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 13 SHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
++ ST + D + + + + P+ +T L FS+ +++ D+ T +S G+GF
Sbjct: 149 AYASTQREDTSGHFNIFVGDLCPE-VTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGF 207
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAI-KRANLYVSGL----------P 121
V++ +DA+ AI ELNG L N+ I+ ++A + A ++ N G+
Sbjct: 208 VSFRNQQDAQTAINELNGKWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAG 267
Query: 122 KHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF-VSGTPEIPQI----SKGIGFVRF 176
K ED Y T+ + D +++ R F + G I ++ KG GFVR+
Sbjct: 268 KENANEDGPENNPQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRY 327
Query: 177 NQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA 215
+ H EA A+Q NG + G + +P G A A
Sbjct: 328 STHEEAALAIQTGNGQLVGGRQIKCSWGSKPTPPGTASA 366
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 240 PLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
P HH A + + + LPP + ++V N+ + D++L ++F G V+
Sbjct: 45 PQHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVE 104
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
K++R ++ FGFV + A AI SLNG L + ++V++
Sbjct: 105 GCKLIRKEKS----SFGFVDYYDRRSAALAIVSLNGRQLFGQPIKVNW 148
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQREAGMRALPA 394
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 143/332 (43%), Gaps = 64/332 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ N+ + + + + + L FS+ G + SCK+ D ++ QS GYGFV + E A++AI
Sbjct: 111 SGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATD-SSGQSKGYGFVQFDNEESAQKAI 169
Query: 86 IELNGLKLQNKSIKVS---YARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTI 139
+LNG+ L +K + V + AI + N+YV L + T+EDL+ F YGTI
Sbjct: 170 EKLNGMLLNDKQVYVGPFLRKQERESAIDKTRFNNVYVKNLSETTTEEDLKKAFGEYGTI 229
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D +K GFV F +A A++ LNG
Sbjct: 230 TSAVVMRDGDGK----------------TKCFGFVNFENADDAATAVEALNGK------- 266
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
KF + KA N +R F +M+ A KF
Sbjct: 267 ----KFDDKEWFVGKAQKKNERENELKVR-FEQSMKE--------AADKF---------- 303
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL D+ L QLF PFG + + KV+RDP +G GFV
Sbjct: 304 ----------QGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGI-SRGSGFVA 352
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + + L V+ K
Sbjct: 353 FSTPEEASKALMEMNGKMVVSKPLYVALAQRK 384
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T L LF+ VG+V S ++ RD TT +SLGYG+VNY +DA RA+
Sbjct: 24 TSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALD 83
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L I++ Y+ PS N+++ L K + + L + F +G I++ ++
Sbjct: 84 MLNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCKV 143
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D SKG GFV+F+ A+ A+++LNG +
Sbjct: 144 ATDSSGQ----------------SKGYGFVQFDNEESAQKAIEKLNGML 176
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 41/225 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T T+E+L+ F G + S ++RD ++ +GFVN+ +DA A+
Sbjct: 203 NNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRD-GDGKTKCFGFVNFENADDAATAVE 261
Query: 87 ELNGLKLQNKS---------------IKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
LNG K +K +KV + + EA + ANLY+ L + +
Sbjct: 262 ALNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDR 321
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF P+GTI + +++ D IS+G GFV F+ EA A+ E
Sbjct: 322 LKQLFSPFGTITSCKVMRDPNG----------------ISRGSGFVAFSTPEEASKALME 365
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG + S+P+ V A R + A L AQ + +R A A
Sbjct: 366 MNGKMV--VSKPLYVALAQ----RKEDRRARLQAQFSQIRPVAMA 404
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q +NL + + ++ + L+ LFS G + SCK++RD S G GFV + E+A +A
Sbjct: 304 QGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGI-SRGSGFVAFSTPEEASKA 362
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
++E+NG + +K + V+ A+ + +RA L
Sbjct: 363 LMEMNGKMVVSKPLYVALAQRKED--RRARL 391
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 86/233 (36%), Gaps = 72/233 (30%)
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
+LYV L ++T L +LF G +++ R+ C + + S G G+
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRV-CRDLTTRR--------------SLGYGY 69
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
V ++ +A A+ LN T G+ PI + ++ H +
Sbjct: 70 VNYSSPQDAARALDMLNFTPLNGS--PIRIMYS----------------------HRDPS 105
Query: 234 MRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFG 293
+R GSG IF+ NL + L F
Sbjct: 106 VRK-------------------------------SGSG-NIFIKNLDKGIDHKALHDTFS 133
Query: 294 PFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS 346
FG + + KV D + + KG+GFV N + A AI+ LNG L D+ + V
Sbjct: 134 AFGNILSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 185
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPSGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQREAGMRALPA 394
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 137/317 (43%), Gaps = 68/317 (21%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQN------- 95
L FS+ G + SCK++ D+ S GYGFV++ E AERAI ++NG+ L +
Sbjct: 6 LYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR 63
Query: 96 -KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
KS K A + A + N+Y+ + M E L+ LF +G ++ +++ D+
Sbjct: 64 FKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE------ 117
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
SG SKG GFV F +H +A+ A+ E+NG G I V A R
Sbjct: 118 ----SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ--IYVGRAQKKVERQT 165
Query: 215 ALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
L + KF + D + G +
Sbjct: 166 EL-----------------------------KRKFEQMKQDRITRY---------QGVNL 187
Query: 275 FVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+V NL +D L + F PFG + + KV+ + + KGFGFVC ++ +EA A+ +N
Sbjct: 188 YVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMN 245
Query: 335 GYALGDRLLQVSFKTHK 351
G + + L V+ K
Sbjct: 246 GRIVATKPLYVALAQRK 262
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 82 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 140
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 141 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 200
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 201 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 243
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 244 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 281
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 284 EDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLL 343
++ L+ F FG + + KVV D KG+GFV + A AI+ +NG L DR +
Sbjct: 2 DNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 59
Query: 344 QVS-FKTHK 351
V FK+ K
Sbjct: 60 FVGRFKSRK 68
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 70/333 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E A RAI
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDERGSK--GYGFVHFETEEAANRAIET 157
Query: 88 LNGLKLQNKSIKVSYARP--------SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + S+A+K N+Y+ + E L+ +F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEVFAAFGRT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D+ S+G GFV F H +A+ A+ E+NG E +
Sbjct: 218 LSVRVMKDERGR----------------SRGFGFVNFAHHEDAQKAVDEMNGK--ELNGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ L Q R KF + D +
Sbjct: 260 VIYV-------GRAQ---KRLERQGELKR-------------------KFELIKQDRIQR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD-PQTYKCKGFGFV 318
G ++V NL +D L + F P+G + + KV+ D PQ+ +GFGFV
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGPQS---RGFGFV 338
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG + + L V+ +
Sbjct: 339 CFSSPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ + + + + L + F +G I++ ++
Sbjct: 71 TMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A A++ +NG +
Sbjct: 131 VCDERG-----------------SKGYGFVHFETEEAANRAIETMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + R S KF
Sbjct: 163 ---------------LNDRKVFVGHFKS--RKEREEELGSKALKFT-------------- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I++ N + D L ++F FG +V+V++D + + +GFGFV +++
Sbjct: 192 --------NIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERG-RSRGFGFVNFAHHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L +++ V
Sbjct: 243 DAQKAVDEMNGKELNGKVIYV 263
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + E+L+ +F++ G S ++++D+ +S G+GFVN+ EDA++A+
Sbjct: 191 TNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDER-GRSRGFGFVNFAHHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ D PQ S+G GFV F+ EA A+ E
Sbjct: 310 LRKEFAPYGTITSAKVMTDG----------------PQ-SRGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A +R
Sbjct: 353 MNGRIV--ATKPLYVALAQRREERKAILTNKYMQRLATLR 390
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V +L P+ + +L+Q F P G + +++V RD T + G+ ++ +A A+ ++
Sbjct: 13 LYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALDTM 72
Query: 334 NGYALGDRLLQVSFKTHKP 352
N + R +++ + P
Sbjct: 73 NYDVIKGRPIRIMWSQRDP 91
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 148/333 (44%), Gaps = 65/333 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L FS G + SCK+ D SLGYGFV++ EDAE AI +
Sbjct: 169 NVFIKNLDKAIDNKTLFDTFSVFGNILSCKVATDDE-GNSLGYGFVHFENPEDAETAINK 227
Query: 88 LNGLKLQNKSIKVSY--ARPSSEAIKR----ANLYVSGL-PKHMTQEDLENLFRPYGTII 140
+NG+ L +K + V Y +R EA + N+Y L P T+E + LF YG I
Sbjct: 228 VNGMLLNDKQVYVGYFKSRQEREASEETHIFTNVYTKNLIPSMCTEEKIRELFSLYGEIT 287
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ + D EN E+P KG FV F + A A++ELNG EG S
Sbjct: 288 SVYVPVD----EN---------EVP---KGFAFVNFAKPECAAKAVEELNGRDFEGKSLY 331
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
+ GRA+ A + A +R A R A++L
Sbjct: 332 V---------GRAQKKA----EREAELRRKAENKR------------------AEILKKY 360
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
G ++V NL + ++ L + F FG + + +V+RD + +GFGFVC
Sbjct: 361 ---------QGVNLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDDKGV-SRGFGFVCF 410
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
+ +EA A+ +NG +G + L V K +
Sbjct: 411 STPEEATKAVTEMNGKMMGKKPLYVCLAQRKEI 443
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 32 NYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGL 91
N +P T+E+++ LFS GE+ S + D+ G+ FVN+ + E A +A+ ELNG
Sbjct: 265 NLIPSMCTEEKIRELFSLYGEITSVYVPVDENEVPK-GFAFVNFAKPECAAKAVEELNGR 323
Query: 92 KLQNKSIKVSYARPSSE---------AIKRA---------NLYVSGLPKHMTQEDLENLF 133
+ KS+ V A+ +E KRA NLYV LP M +E L F
Sbjct: 324 DFEGKSLYVGRAQKKAEREAELRRKAENKRAEILKKYQGVNLYVRNLPDDMDEEGLRKEF 383
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+GT+ + R++ D +S+G GFV F+ EA A+ E+NG +
Sbjct: 384 SNFGTLTSCRVMRDDKG----------------VSRGFGFVCFSTPEEATKAVTEMNGKM 427
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
+P+ V A R L A A AA A+
Sbjct: 428 --MGKKPLYVCLAQRKEIRQAQLEAQRIAAAAGGLRIPGAV 466
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 21/156 (13%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGL---KLQNKSIK 99
L +FS++G V S ++ RD T +SLGY +VN++ +DAERA+ +N + ++K ++
Sbjct: 93 LFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALETMNFYACPQTRDKPMR 152
Query: 100 VSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSF 157
+ + P+ N+++ L K + + L + F +G I++ ++ D +
Sbjct: 153 LMWKNRDPTIRKSGAGNVFIKNLDKAIDNKTLFDTFSVFGNILSCKVATDDEGN------ 206
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
S G GFV F +AE A+ ++NG +
Sbjct: 207 ----------SLGYGFVHFENPEDAETAINKVNGML 232
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V +P M +E L+ FS+ G + SC+++RD S G+GFV + E+A +A
Sbjct: 361 QGVNLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDDKGV-SRGFGFVCFSTPEEATKA 419
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + K + V A+ + I++A L
Sbjct: 420 VTEMNGKMMGKKPLYVCLAQ--RKEIRQAQL 448
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
S I+V +L PE + L+++F G V +V+V RD T + G+ +V + D+A A
Sbjct: 75 SSATIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERA 134
Query: 330 IQSLNGYALG---DRLLQVSFKTHKP 352
++++N YA D+ +++ +K P
Sbjct: 135 LETMNFYACPQTRDKPMRLMWKNRDP 160
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L+ F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H +A+ A+ ++NG G +
Sbjct: 218 LSVKVMTDDHGK----------------SRGFGFVSFERHEDAQKAVDDMNGKDLNGKA- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IFVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L + FG +GA +VKV+ D K +GFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHG-KSRGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDDMNGKDLNGKAIFV 263
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ F G S K++ D +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG L K+I V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFTPFGSITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEINGKIIFV 263
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R KF L + ++
Sbjct: 259 --KIIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 136/332 (40%), Gaps = 67/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEK-GNSKGYGFVHFETEESANTSIEK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV +T E L+ +F YGTI
Sbjct: 150 VNGMLLNAKKVFVGRFIPRKEREKELGEKAKLFTNVYVKNFGDELTDESLKEMFEKYGTI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ R+ M EN S+G GFV F AE A+QELNG
Sbjct: 210 TSHRV----MIKENK-------------SRGFGFVAFENPESAEVAVQELNG-------- 244
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
G K L AQ R R + R++
Sbjct: 245 --------KELGDGKVLYVG-RAQKKNERQMELKRRFEQLKMERLTRYQ----------- 284
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 285 -----------GVNLYVKNLDDSIDDERLRKEFSPFGTITSAKVMLE--EGRSKGFGFVC 331
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG +G + L V+ K
Sbjct: 332 FSAAEEATKAVTEMNGRIVGSKPLYVALAQRK 363
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 70/316 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K++ + + + F +G I++ ++
Sbjct: 62 TMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A +++++NG +
Sbjct: 122 AQDEKGN----------------SKGYGFVHFETEESANTSIEKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LNA+ + F + R K A L N
Sbjct: 155 ---------------LNAKKVFVGRF----------IPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N E D L ++F +G + + +V+ + K +GFGFV N +
Sbjct: 185 ---------VYVKNFGDELTDESLKEMFEKYGTITSHRVM--IKENKSRGFGFVAFENPE 233
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q LNG LGD
Sbjct: 234 SAEVAVQELNGKELGD 249
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +T E L+ +F G + S +++ + +S G+GFV + E AE A+
Sbjct: 183 TNVYVKNFGDELTDESLKEMFEKYGTITSHRVMIKEN--KSRGFGFVAFENPESAEVAVQ 240
Query: 87 ELNGLKLQN-KSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
ELNG +L + K + V A+ +E +KR NLYV L + E
Sbjct: 241 ELNGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDE 300
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ ++ SKG GFV F+ EA A+
Sbjct: 301 RLRKEFSPFGTITSAKVMLEEGR-----------------SKGFGFVCFSAAEEATKAVT 343
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFG 238
E+NG I S+P+ V A R LA+ + A MR M+H G
Sbjct: 344 EMNGRIV--GSKPLYVALAQRKEDRKAHLASQYMQRMANMR-----MQHMG 387
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ E L+ FS G + S K++ ++ +S G+GFV + E+A +A
Sbjct: 284 QGVNLYVKNLDDSIDDERLRKEFSPFGTITSAKVMLEE--GRSKGFGFVCFSAAEEATKA 341
Query: 85 IIELNGLKLQNKSIKVSYA-RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
+ E+NG + +K + V+ A R A+ Y+ + +M + + +F+P G
Sbjct: 342 VTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQRMA-NMRMQHMGQIFQPGG 394
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 180 VAQDENGN----------------SKGYGFVHYETDEAASQAIKHVNGML---------- 213
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 214 ----------------LNEKKVYVGH------HIPKKDRQS---KFDEMKANFTN----- 243
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ PE D+ LF +G V + + RD +T K +GFGFV T++
Sbjct: 244 ----------IYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSH 293
Query: 324 DEAVFAIQSLN 334
++A A+Q LN
Sbjct: 294 EDASKAVQELN 304
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 143/379 (37%), Gaps = 110/379 (29%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A +AI
Sbjct: 149 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEN-GNSKGYGFVHYETDEAASQAIK 207
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + N+YV + +T ++ LF YG
Sbjct: 208 HVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGD 267
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ +S + D+ + S+G GFV F H +A A+QELN G
Sbjct: 268 VTSSSLARDQETGK---------------SRGFGFVNFTSHEDASKAVQELNEKEFHG-- 310
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
N GRA+ + + +R A R +++++
Sbjct: 311 -------QNLYVGRAQ----KKHEREEELRKSYEAARQ-----EKASKYQ---------- 344
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD------------ 306
G +++ NL E +D L QLF FG + + KV+RD
Sbjct: 345 ------------GVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESK 392
Query: 307 ----------------------PQTYKCKG------------FGFVCMTNYDEAVFAIQS 332
P+ + + FGFVC N D+A A+
Sbjct: 393 EGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAE 452
Query: 333 LNGYALGDRLLQVSFKTHK 351
+N + ++ L V+ K
Sbjct: 453 MNQRMVNNKPLYVALAQRK 471
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQT---MTQEELQHLFSSVGEVESCK 57
++ +++Y + QS +E +N YV +T +E + LF G+V S
Sbjct: 213 LLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSS 272
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYA----------RPSS 107
L RD+ T +S G+GFVN+ EDA +A+ ELN + +++ V A R S
Sbjct: 273 LARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSY 332
Query: 108 EAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKM 149
EA ++ NLY+ L + E L LF +G I +++++ D +
Sbjct: 333 EAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSI 382
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF G+V +++V RD T + G+ +V + A++
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 122 LNYTLIKGRPCRIMWSQRDP 141
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 68/328 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 57 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 116
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 117 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 176
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 177 VAQDEYGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 210
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 211 ----------------LNEKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 240
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D LF +G + + + RD +T K +GFGFV +++
Sbjct: 241 ----------IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ A A+++LN Y L + L V K
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKK 318
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF GE+ S L RD T +S G+GFVN+ E A A+
Sbjct: 239 TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 298
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 299 ALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 358
Query: 129 LENLFRPYGTIITSRIL 145
L LF YG I +++++
Sbjct: 359 LRELFSSYGNITSAKVM 375
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 68/328 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 57 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 116
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 117 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 176
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 177 VAQDEYGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 210
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 211 ----------------LNEKKVFVGH------HIAKKDRQS---KFEEMKANFTN----- 240
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D LF +G + + + RD +T K +GFGFV +++
Sbjct: 241 ----------IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ A A+++LN Y L + L V K
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKK 318
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 112/286 (39%), Gaps = 63/286 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF GE+ S L RD T +S G+GFVN+ E A A+
Sbjct: 239 TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 298
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 299 ALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 358
Query: 129 LENLFRPYGTIITSRILC---------------------------------------DKM 149
L LF YG I +++++ DK
Sbjct: 359 LRELFSSYGNITSAKVMREAIVDVPAETEKGKEADKEKAKEAGDKSEEKGESKSESEDKS 418
Query: 150 ASENVR--SFVSGTPEIPQI--SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
SE S PE + SKG GFV F+ EA A+ E+N + G +P+ V
Sbjct: 419 KSEEKSEGKTESAKPEKRHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHG--KPLYVAL 476
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAP 251
A R L A++ A+ + AA P A F AP
Sbjct: 477 AQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQPAVFYGAP 522
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G V SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSK--GYGFVHFGTREAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGIPLNDCKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDQ----------SGK------SKGFGFVSFEKHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATEPLYVALAQRK 371
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G +++ ++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG
Sbjct: 131 VCDENG-----------------SKGYGFVHFGTREAAERAIEKMNGI------------ 161
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
P K ++ A + F N
Sbjct: 162 ----PLNDCKVFVGRFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D Q+ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTD-QSGKSKGFGFVSFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ FS G + S K++ + +S G+GFV + E+A +A
Sbjct: 292 QVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + + + V+ A+ E
Sbjct: 350 VTEMNGRIVATEPLYVALAQRKEE 373
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQREAGMRALPA 394
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ + AERAI +
Sbjct: 169 NIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSK--GYGFVHFETRDAAERAIDK 226
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M L+ LF +G
Sbjct: 227 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPA 286
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SGT SKG GFV F +H +A+ A++E+NG E +
Sbjct: 287 LSVKVMTDE----------SGT------SKGFGFVNFERHEDAQKAVEEMNGK--ELNGK 328
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF L D +
Sbjct: 329 KIYVGRAQKKGERQTEL-----------------------------KRKFEQLKQDRITR 359
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 360 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 408
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L ++ K
Sbjct: 409 FSSPEEATKAVTEMNGRIVATKPLYIALAQRK 440
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M L+ LF G S K++ D++ S G+GFVN+ R EDA++A+
Sbjct: 260 TNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDES-GTSKGFGFVNFERHEDAQKAVE 318
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 319 EMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDER 378
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 379 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 421
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ + A R L + A++R
Sbjct: 422 MNGRI--VATKPLYIALAQRKEERQAHLTNQYMQRMASVR 459
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 70/268 (26%)
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 133 DAERALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFG 192
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I++ +++CD+ SKG GFV F AE A+ ++NG +
Sbjct: 193 NILSCKVVCDEHG-----------------SKGYGFVHFETRDAAERAIDKMNGML---- 231
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
K ++ A + F N
Sbjct: 232 ------------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------ 261
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+++ N + +D L +LFG FG +VKV+ D ++ KGFGF
Sbjct: 262 ----------------VYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTD-ESGTSKGFGF 304
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQV 345
V +++A A++ +NG L + + V
Sbjct: 305 VNFERHEDAQKAVEEMNGKELNGKKIYV 332
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SL SG IF+ NL ++ L+ F FG + + KVV D + KG+GFV D
Sbjct: 161 SLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCD--EHGSKGYGFVHFETRD 218
Query: 325 EAVFAIQSLNGYALGDRLLQVS-FKTHK 351
A AI +NG L DR + V FK+ K
Sbjct: 219 AAERAIDKMNGMLLNDRKVFVGRFKSRK 246
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 68/328 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 57 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 116
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 117 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 176
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 177 VAQDEYGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 210
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 211 ----------------LNEKKVFVGH------HIAKKDRQS---KFEEMKANFTN----- 240
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D LF +G + + + RD +T K +GFGFV +++
Sbjct: 241 ----------IYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ A A++ LN Y L + L V K
Sbjct: 291 EAASAAVEGLNEYELKGQKLYVGRAQKK 318
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 112/289 (38%), Gaps = 66/289 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF GE+ S L RD T +S G+GFVN+ E A A+
Sbjct: 239 TNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 298
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 299 GLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 358
Query: 129 LENLFRPYGTIITSRIL-------------------------------------CDKMAS 151
L LF YG I +++++ D+ +
Sbjct: 359 LRELFSSYGNITSAKVMREAISDVPADAEKDKEADKEKAKKETGDKPEDKAETKSDEKSE 418
Query: 152 ENVRS--FVSGTPEIPQISK-------GIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
+ +S G + + K G GFV F+ EA A+ E+N + G +P+
Sbjct: 419 DKSKSEEKTEGKTDGAKTEKKHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHG--KPLY 476
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAP 251
V A R L A++ A+ + AA P A F AP
Sbjct: 477 VALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQPAVFYGAP 525
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 68/322 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 73 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 132
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 133 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 192
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 193 VAQDEYGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 226
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H A + KF + A+ N
Sbjct: 227 ----------------LNEKKVFVGHHIA---------KKDRQSKFEEMKANFTN----- 256
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D LF +G + + + RD +T K +GFGFV +++
Sbjct: 257 ----------IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 306
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A+++LN Y L + L V
Sbjct: 307 EAASAAVEALNEYELKGQKLYV 328
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF GE+ S L RD T +S G+GFVN+ E A A+
Sbjct: 255 TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 314
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 315 ALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 374
Query: 129 LENLFRPYGTIITSRIL 145
L LF YG I +++++
Sbjct: 375 LRELFSSYGNITSAKVM 391
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 68/328 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 57 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 116
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 117 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 176
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 177 VAQDEYGN----------------SKGYGFVHYETAEAATNAIKHVNGML---------- 210
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 211 ----------------LNEKKVFVGH------HIAKKDRQS---KFEEMKANFTN----- 240
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D LF +G + + + RD +T K +GFGFV +++
Sbjct: 241 ----------IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ A A+++LN Y L + L V K
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKK 318
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 112/287 (39%), Gaps = 64/287 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF GE+ S L RD T +S G+GFVN+ E A A+
Sbjct: 239 TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 298
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 299 ALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 358
Query: 129 LENLFRPYGTIITSRILC----------------------------------------DK 148
L LF YG I +++++ DK
Sbjct: 359 LRELFSSYGNITSAKVMREAIVDAPAEAEKDKEADKEKAKKEAGDKSEEKGEAKSESEDK 418
Query: 149 MASENVR--SFVSGTPEIPQI--SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
SE S PE + SKG GFV F+ EA A+ E+N + G +P+ V
Sbjct: 419 SKSEEKTEGKTESAKPEKKHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHG--KPLYVA 476
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAP 251
A R L A++ A+ + AA P A F AP
Sbjct: 477 LAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQPAVFYGAP 523
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 33 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 92
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 93 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 152
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 153 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 184
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 185 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 214
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D+ L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 215 ---------VYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 264
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 265 DANKAVEEMNGKEMSGKAIFV 285
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 155/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 122 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 179
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + ++L+ LF +G
Sbjct: 180 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKT 239
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 240 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 281
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 282 AIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 312
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 313 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 361
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 362 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 393
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + + L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 213 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 271
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 272 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 331
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 332 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 374
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 375 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 416
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 71/317 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q + +L LF+ V +V S ++ RD TT +SLGYG+VN+ +DA RA+
Sbjct: 33 TSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALD 92
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L N+ I++ Y+ PS AN+++ L K + + L + F +G I++ +I
Sbjct: 93 VLNFTPLNNRPIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKI 152
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D SG +SKG GFV+F+ A++A+ +LNG +
Sbjct: 153 ATD----------ASG------LSKGYGFVQFDSEESAQNAIDKLNGML----------- 185
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
+N + + HF L R L+ NN
Sbjct: 186 ---------------INDKQVYVGHF----------LRKQDRENA--LSKTKFNN----- 213
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL+ T D L + FG +G + + ++RD K + FGFV N D
Sbjct: 214 ---------VYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADG-KSRCFGFVNFENPD 263
Query: 325 EAVFAIQSLNGYALGDR 341
+A A++ LNG + D+
Sbjct: 264 DAAKAVEGLNGKKVDDK 280
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T EEL F G + S ++RD +S +GFVN+ +DA +A+
Sbjct: 212 NNVYVKNLSESTTDEELMKFFGEYGTITSAVIMRD-ADGKSRCFGFVNFENPDDAAKAVE 270
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRA-------NLYVSGLPKHMTQED 128
LNG K+ +K V A+ SE +IK + NLY+ L ++ E
Sbjct: 271 GLNGKKVDDKEWYVGKAQKKSEREQELKGRFEQSIKESADKYQGVNLYLKNLDDTISDEK 330
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YGTI + +++ D I +G GFV F+ EA A+ E
Sbjct: 331 LKEMFAEYGTITSCKVMRDPTG----------------IGRGSGFVAFSTPEEASRALGE 374
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
+NG + G +P+ V A R + A L AQ + MR A
Sbjct: 375 MNGKMIAG--KPLYVALAQ----RKEDRRARLQAQFSQMRPVA 411
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 14 HRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFV 73
+S +S Q NL + + T++ E+L+ +F+ G + SCK++RD T G GFV
Sbjct: 302 EQSIKESADKYQGVNLYLKNLDDTISDEKLKEMFAEYGTITSCKVMRDPTGI-GRGSGFV 360
Query: 74 NYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+A RA+ E+NG + K + V+ A+ + +RA L
Sbjct: 361 AFSTPEEASRALGEMNGKMIAGKPLYVALAQRKED--RRARL 400
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
G +++ NL D L ++F +G + + KV+RDP T +G GFV + +EA A+
Sbjct: 314 GVNLYLKNLDDTISDEKLKEMFAEYGTITSCKVMRDP-TGIGRGSGFVAFSTPEEASRAL 372
Query: 331 QSLNGYALGDRLLQVSFKTHK 351
+NG + + L V+ K
Sbjct: 373 GEMNGKMIAGKPLYVALAQRK 393
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SL SG IF+ NL + L F FG + + K+ D KG+GFV + +
Sbjct: 114 SLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGL-SKGYGFVQFDSEE 172
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
A AI LNG + D+ + V
Sbjct: 173 SAQNAIDKLNGMLINDKQVYVG 194
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEINGKIIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R KF L + ++
Sbjct: 259 --KIIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEINGKIIFV 263
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R KF L + ++
Sbjct: 259 --KIIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 143/333 (42%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+ +S GYGFV+Y E AE AI
Sbjct: 138 NIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDEQ-GRSKGYGFVHYETAEAAETAIKA 196
Query: 88 LNGLKLQNKSIKVSY-----ARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + R S RA N+YV L ++ E+ LF +G +
Sbjct: 197 VNGMLLNDKKVYVGHHISKKERQSKLDEIRAQFTNIYVKNLDPEVSLEEFTQLFEQFGNV 256
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ I D+ + SKG GFV F H EA++A+ L+ T E
Sbjct: 257 TSAVIQTDEEGN----------------SKGFGFVNFEFHEEAQNAVDGLHDT--EYNGR 298
Query: 200 PITVKFANSPAGRAKALAANL-NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L + +A+ M +
Sbjct: 299 KLFVSRAQKKAEREEELRKSYEHAKMEKMSKY---------------------------- 330
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +++ NL E +D L F PFG + + KV+RD + KGFGFV
Sbjct: 331 -----------QGVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRD-EKGSSKGFGFV 378
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ DEA A+ +N +G + L VS +
Sbjct: 379 CFSSPDEATKAVAEMNNKMIGAKPLYVSLAQRR 411
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 69/328 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + T+++ L +F+ +G V S ++ RD T +SLGY +VNY D ERA+
Sbjct: 48 SASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 107
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ ++ ++ +++ P+ + N+++ L + + + L + F +G +++ +
Sbjct: 108 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCK 167
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ SKG GFV + AE A++ +NG +
Sbjct: 168 VATDEQGR----------------SKGYGFVHYETAEAAETAIKAVNGML---------- 201
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S K + A N
Sbjct: 202 ----------------LNDKKVYVGH------HISKKERQS---KLDEIRAQFTN----- 231
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V NL PE QLF FG V + V++ + KGFGFV +
Sbjct: 232 ----------IYVKNLDPEVSLEEFTQLFEQFGNVTSA-VIQTDEEGNSKGFGFVNFEFH 280
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A+ L+ R L VS K
Sbjct: 281 EEAQNAVDGLHDTEYNGRKLFVSRAQKK 308
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
++ ++ R + ++ Q +N+ V + ++ EE LF G V S +I+ S
Sbjct: 211 HHISKKERQSKLDEIRAQFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSA-VIQTDEEGNS 269
Query: 68 LGYGFVNYYRTEDAERAI-----IELNGLKL----------QNKSIKVSYARPSSEAIKR 112
G+GFVN+ E+A+ A+ E NG KL + + ++ SY E + +
Sbjct: 270 KGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSK 329
Query: 113 ---ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
NLY+ L + E L F P+GTI +++++ D+ S SK
Sbjct: 330 YQGVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRDEKGS----------------SK 373
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH 229
G GFV F+ EA A+ E+N + ++P+ V A R + L + + AQ +R
Sbjct: 374 GFGFVCFSSPDEATKAVAEMNNKMI--GAKPLYVSLAQRREVRRQQLESQI-AQRNQIRM 430
Query: 230 FAAA 233
AA
Sbjct: 431 QQAA 434
>gi|66801427|ref|XP_629639.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
gi|60463019|gb|EAL61215.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
Length = 550
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 44/210 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK------------------------ 62
+NLIVN +P++M EL+ LF GE+ESCK++ ++
Sbjct: 82 TNLIVNNIPKSMDSNELKSLFDKFGEIESCKIVFNRKKDGNGNSNININSNNSNGSNSNN 141
Query: 63 -----TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYV 117
SLGYGFV + + ++A AI +LNG ++ +K +KVSYA+ SS ANLY+
Sbjct: 142 NNNNSNNNSSLGYGFVKFSKKDEAAMAIEQLNGFEVDSKPLKVSYAQASSSQSTHANLYI 201
Query: 118 SGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFN 177
+ L H+T +L+ +F +G +I ++IL D P+ S+ +GFV F+
Sbjct: 202 NRLEPHVTNANLKEVFGSFGDVIDTKILTD--------------PDTGA-SRCVGFVHFS 246
Query: 178 QHIEAEHAMQELNGTIPEGASEPITVKFAN 207
Q EA A+ +NG S PI VKFAN
Sbjct: 247 QRREALKAVSSMNGANIPFQSTPIYVKFAN 276
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ L P + L ++FG FG V + K++ DP T + GFV + EA+ A+ S+
Sbjct: 199 LYINRLEPHVTNANLKEVFGSFGDVIDTKILTDPDTGASRCVGFVHFSQRREALKAVSSM 258
Query: 334 NG 335
NG
Sbjct: 259 NG 260
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 69/328 (21%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+T S +T + +++L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 32 DTAASDAATTPNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 91
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ + ++ +++ P+ + N+++ L +
Sbjct: 92 GYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 151
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D+ + SKG GFV + A +A+
Sbjct: 152 KALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAANNAI 195
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H H S
Sbjct: 196 KHVNGML--------------------------LNDKKVFVGH------HISKKDRQS-- 221
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + A+ N ++V N+ PE D +LFG FG + + + RD
Sbjct: 222 -KFEEMKANFTN---------------VYVKNIDPEVTDEEFRELFGKFGDITSATISRD 265
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+ K +GFGFV +++ A A+ LN
Sbjct: 266 -DSGKSRGFGFVNYVDHENAQTAVDDLN 292
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 51/245 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF G++ S + RD + +S G+GFVNY E+A+ A+
Sbjct: 231 TNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDS-GKSRGFGFVNYVDHENAQTAVD 289
Query: 87 ELNGLKLQNKSIKVSYARPS---SEAIKR---------------ANLYVSGLPKHMTQED 128
+LN + + V A+ E ++R NLYV L + E
Sbjct: 290 DLNDKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 349
Query: 129 LENLFRPYGTIITSRILCD------------------------------KMASENVRSFV 158
L LF +GTI +++++ D K E+
Sbjct: 350 LRELFSAFGTITSAKVMRDTVGAGSDSEKEETKESSEEVEEPKEEETNAKTEDEDKTDAK 409
Query: 159 SGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAA 218
++ SKG GFV F+ EA A+ E+N + G +P+ V A R L A
Sbjct: 410 KSDKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRKSQLEA 467
Query: 219 NLNAQ 223
++ A+
Sbjct: 468 SIQAR 472
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 140 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 198
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 199 NGMLLNDKKVFVGHHISK 216
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ + AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSK--GYGFVHFETRDAAERAIDK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPS 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SGT SKG GFV F +H +A+ A++E+NG E +
Sbjct: 218 LSVKVMTDE----------SGT------SKGFGFVNFERHEDAQKAVEEMNGK--ELNGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF L D +
Sbjct: 260 KIYVGRAQKKGERQTEL-----------------------------KRKFEQLKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRNKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L ++ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYIALAQRK 371
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +++ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALE 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDEHG-----------------SKGYGFVHFETRDAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L +LFG FG +VKV+ D ++ KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTD-ESGTSKGFGFVNFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG L + + V
Sbjct: 243 DAQKAVEEMNGKELNGKKIYV 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M L+ LF G S K++ D++ S G+GFVN+ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDES-GTSKGFGFVNFERHEDAQKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R +KG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------NKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ + A R L + A++R
Sbjct: 353 MNGRIV--ATKPLYIALAQRKEERQAHLTNQYMQRMASIR 390
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 43/80 (53%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V +L PE + +L++ F P G + +++V RD T + G+ +V +A A+++
Sbjct: 12 SLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALET 71
Query: 333 LNGYALGDRLLQVSFKTHKP 352
+N + + +++ + P
Sbjct: 72 MNFDVIKGKPVRIMWSQRDP 91
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 140/329 (42%), Gaps = 68/329 (20%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
YN + S S + +++L V + ++T+ L LFSSVG+V S ++ RD T +S
Sbjct: 42 YNDMPTPTSAAPSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRS 101
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMT 125
LGY +VNY D ERA+ ELN ++ + ++ +++ P+ N+++ L +
Sbjct: 102 LGYAYVNYNSANDGERALEELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDGAID 161
Query: 126 QEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
+ L + F +G I++ ++ D++ + SKG GFV + A A
Sbjct: 162 NKALHDTFAAFGNILSCKVAVDELGN----------------SKGYGFVHYETAEAASQA 205
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSA 245
++ +NG + LN + + H
Sbjct: 206 IKSVNGML--------------------------LNEKKVFVGHHIPKKDRMS------- 232
Query: 246 RFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVR 305
KF + A+ N I+V N+ E D+ +LF +G + + +
Sbjct: 233 --KFEEMKANFTN---------------IYVKNIETEVTDDEFRELFEKYGEITSASLAH 275
Query: 306 DPQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
D +T K +GFGFV N+++A A+ LN
Sbjct: 276 DNETGKSRGFGFVNYINHEDAYKAVDELN 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 106/255 (41%), Gaps = 60/255 (23%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T +E + LF GE+ S L D T +S G+GFVNY EDA +A+
Sbjct: 242 TNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVD 301
Query: 87 ELN-----GLKL-----QNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQED 128
ELN G KL Q K + R EA ++ NLYV L + E+
Sbjct: 302 ELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQGVNLYVKNLADEVDDEE 361
Query: 129 LENLFRPYGTIITSRILCD------------KMASENVRSFVSGTP-------------- 162
L +F YG I +++++ D + +++ V G P
Sbjct: 362 LRKIFEAYGAITSAKVMRDVTPLDKAETDAKENKTDDKEKQVDGEPTEDKNGEEQEDMEE 421
Query: 163 --------------EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANS 208
++ SKG GFV F+ EA A+ ELN + G +P+ V A
Sbjct: 422 LEKKMDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIHG--KPLYVALAQR 479
Query: 209 PAGRAKALAANLNAQ 223
R L A++ A+
Sbjct: 480 KEVRKTQLEASIQAR 494
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
K+ HG+ +F+ NL ++ L F FG + + KV D + KG+GFV +
Sbjct: 145 KTGHGN---VFIKNLDGAIDNKALHDTFAAFGNILSCKVAVD-ELGNSKGYGFVHYETAE 200
Query: 325 EAVFAIQSLNGYALGDR 341
A AI+S+NG L ++
Sbjct: 201 AASQAIKSVNGMLLNEK 217
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEINGKIIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R KF L + ++
Sbjct: 259 --KIIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKVLYDTASAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T + Y +VN+ +DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAHLTNEYMQRMASVR 390
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AER +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERVSEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K +++ +++ PS N+++ L K + + L + F +G
Sbjct: 65 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG GFV F AE +++NG +
Sbjct: 125 ILSCKVVCDENG-----------------SKGYGFVHFETQEAAERVSEKMNGML----- 162
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 163 -----------LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------- 192
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV
Sbjct: 193 ---------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFV 236
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG L + + V
Sbjct: 237 SFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEINGKVIFV 263
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEING--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R F + +R++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKRKFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LFS G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 135/327 (41%), Gaps = 81/327 (24%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S L V +P + +++L LF G+V S K++RD T S GYGFV Y + A AI
Sbjct: 319 SKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIF 378
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------------IKRANLYVSGLPKHMTQED 128
+LNG ++ K ++V A SS + +N+YV LP M +
Sbjct: 379 QLNGHLIEGKKMEVRVAAVSSSGSNTSVQAISETDHQLTKEVDMSNVYVQNLPLLMNTDK 438
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L NLF PYG + ++++ D + SG ISKG GFV+F+ +A HA+ E
Sbjct: 439 LLNLFLPYGKVTSAKVAMD---------YTSG------ISKGYGFVKFSDPHDAAHAVIE 483
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFK 248
LNG + EG + V+ +SP ++ A N + M +
Sbjct: 484 LNGCLVEGRKILVRVRPPSSP---VESHANNRTLKEIDMSNL------------------ 522
Query: 249 FAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
+V N+ L +LF PFG + + VV
Sbjct: 523 --------------------------YVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSN 556
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNG 335
KG+GFV + A A+ +NG
Sbjct: 557 N-SSKGYGFVKFADSHCAAEAVAMMNG 582
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 61/334 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL V +P ++ +L LF G + +++ D T S GYGFV Y A AI
Sbjct: 229 TNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEAIK 288
Query: 87 ELNGLKLQNKSIKVSYA-RPSSEAIKR---ANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+NG ++ + ++V A PSS + K + LYV LP + ++ L +LF PYG + +
Sbjct: 289 HMNGRMVEGRMLEVRLAGAPSSGSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSV 348
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
+++ R +G +SKG GFVR++ A HA+ +LNG + EG +
Sbjct: 349 KVM---------RDHATG------LSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVR 393
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSML 262
V +S +N + QA + H + D+ N
Sbjct: 394 VAAVSSS-------GSNTSVQAISETD------------HQLTK------EVDMSN---- 424
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
++V NL + L LF P+G V + KV D + KG+GFV ++
Sbjct: 425 -----------VYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSD 473
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHKPLPPV 356
+A A+ LNG + R + V + P PV
Sbjct: 474 PHDAAHAVIELNGCLVEGRKILV--RVRPPSSPV 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 33/204 (16%)
Query: 14 HRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFV 73
H+ T + D+ SN+ V +P M ++L +LF G+V S K+ D T+ S GYGFV
Sbjct: 414 HQLTKEVDM----SNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFV 469
Query: 74 NYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS-----------EAIKRANLYVSGLPK 122
+ DA A+IELNG ++ + I V PSS + I +NLYV +P
Sbjct: 470 KFSDPHDAAHAVIELNGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDMSNLYVCNIPS 529
Query: 123 HMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEA 182
M + L LF P+G I + ++ S SKG GFV+F A
Sbjct: 530 SMNKAKLVELFLPFGRITHAMVVEQSNNS----------------SKGYGFVKFADSHCA 573
Query: 183 EHAMQELNGTIPEGASEPITVKFA 206
A+ +NG + EG E I+V+ A
Sbjct: 574 AEAVAMMNGALIEG--ETISVRVA 595
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 128/336 (38%), Gaps = 86/336 (25%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N L V +PQTM+ ++L LF G+++ + + Y FV Y A +A+
Sbjct: 622 NCRLYVTNLPQTMSADKLVSLFMPFGQIDRVVMYAE--------YSFVLYADINSAAKAL 673
Query: 86 IELNGLKLQNKSIKVSYARP-------------SSEAIKR---ANLYVSGLPKHMTQEDL 129
++G ++ K + V + P S+ +K ANLYV +P +T E L
Sbjct: 674 KHMDGYLIEGKRLVVKGSEPLPANAAQSACSQSGSKLVKEIDMANLYVGRVPSAVTCEQL 733
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
+F YG I+ ++ + G G +R+ A A+ L
Sbjct: 734 VQIFCLYGEIVQAK----------------------KFDAGYGMIRYANASSAAAAIDHL 771
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKF 249
+G G++ + V+ A PA + + FA + GN
Sbjct: 772 DGYQIGGST--LVVRVAGLPA-------------ESDVATFARTPQTPGNEHRQ------ 810
Query: 250 APLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQT 309
D+ N ++V L P + L +LF P G + KVV D T
Sbjct: 811 ----IDMTN---------------LYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFT 851
Query: 310 YKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
KGFGFV + A AI +NGY L +L V
Sbjct: 852 GVSKGFGFVRFADAYSAATAITHMNGYPLDGHMLAV 887
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
SNL V +P +M + +L LF G + ++ +++ S GYGFV + + A A+
Sbjct: 520 SNLYVCNIPSSMNKAKLVELFLPFGRITHA-MVVEQSNNSSKGYGFVKFADSHCAAEAVA 578
Query: 87 ELNGLKLQNKSIKVSYAR------------------PSSEAIKRANLYVSGLPKHMTQED 128
+NG ++ ++I V A +S I LYV+ LP+ M+ +
Sbjct: 579 MMNGALIEGETISVRVAGLSPSVSSSVSQHSPHSEINASPEINNCRLYVTNLPQTMSADK 638
Query: 129 LENLFRPYGTI 139
L +LF P+G I
Sbjct: 639 LVSLFMPFGQI 649
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL V Y+P +T ++L LF G++ K++ DK T S G+GFV + A AI
Sbjct: 814 TNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFADAYSAATAIT 873
Query: 87 ELNGLKLQNKSIKVSYA--RPSSEAIKRANLY 116
+NG L + V A +PS A A+ Y
Sbjct: 874 HMNGYPLDGHMLAVRTAGVQPSDMASYMAHFY 905
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
G+G +FV NL P + L +LF PFG + +VV D T KG+GFV ++ A
Sbjct: 226 GNGTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAE 285
Query: 329 AIQSLNGYALGDRLLQV 345
AI+ +NG + R+L+V
Sbjct: 286 AIKHMNGRMVEGRMLEV 302
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ M E L+ +F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F +H +A+ A+ E+ G G S
Sbjct: 218 LSVKVMTDDNGK----------------SKGFGFVSFERHEDAQKAVDEMYGKDMNGKSM 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q R KF + D +
Sbjct: 262 FV---------GRAQ---KKVERQTELKR-------------------KFEQMNQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + D L ++FG +G +VKV+ D K KGFGFV ++
Sbjct: 193 ---------VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNG 335
+A A+ + G
Sbjct: 243 DAQKAVDEMYG 253
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +F G S K++ D +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+ G + KS+ V A+ E +KR NLYV L + E
Sbjct: 250 EMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFLPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 353 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEITGKVIFV 263
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEITG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 144/330 (43%), Gaps = 63/330 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ Q++L FS +G++ SCK+ D+ S GYGFV++ + E AERAI +
Sbjct: 90 NIFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEH-GNSKGYGFVHFEKEECAERAIEK 148
Query: 88 LNGLKLQNKSIKVSYARPSSE------AIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+NG+ + ++ + V PSS+ ++ N+YV P T E L ++F +G I
Sbjct: 149 INGMMINDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDEKLRDMFSEFGEI-- 206
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ C V PE SKG GFV F+ AE A++ ++G G + +
Sbjct: 207 -KSCC-----------VEKNPE--GKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRA--L 250
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
A R + L L Q A K+ P
Sbjct: 251 YASRAQRKEERQEELKQRLEKQRAERLS------------------KYVP---------- 282
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
G ++V NL +D L + F +G + + KV+ D + KGFGFVC T
Sbjct: 283 ---------GVNLYVKNLDDNIDDERLKEAFSHYGPITSAKVMTD-ANGRSKGFGFVCFT 332
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++A A+ +N +G + L V+ K
Sbjct: 333 QPEQAARAVTEMNATLVGSKPLYVALAQRK 362
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + T+ L FS +G V S ++ RD T SLGYG+VN+ +DAERA+
Sbjct: 1 TSLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALE 60
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN + I++ +++ PS + N+++ L K + Q+ L + F G I++ +I
Sbjct: 61 NLNYESFMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKI 120
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D+ + SKG GFV F + AE A++++NG +
Sbjct: 121 AMDEHGN----------------SKGYGFVHFEKEECAERAIEKINGMM 153
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V P T E+L+ +FS GE++SC + +S G+GFV ++ + AE+A+
Sbjct: 180 NNIYVKNFPPDTTDEKLRDMFSEFGEIKSC-CVEKNPEGKSKGFGFVCFHDPDHAEQAVR 238
Query: 87 ELNGLKLQNKSIKVSYARPSSEA-------------------IKRANLYVSGLPKHMTQE 127
++G ++ +++ S A+ E + NLYV L ++ E
Sbjct: 239 VMHGKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDE 298
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L+ F YG I +++++ D N R SKG GFV F Q +A A+
Sbjct: 299 RLKEAFSHYGPITSAKVMTDA----NGR------------SKGFGFVCFTQPEQAARAVT 342
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+N T+ S+P+ V A R L A + A R
Sbjct: 343 EMNATLV--GSKPLYVALAQRKEDRRAKLIAEHQQRLAQYR 381
>gi|392927774|ref|NP_510259.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
gi|371570799|emb|CAA90446.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
Length = 575
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 64/334 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N N+ + + + + + + FS G + SCK+ D S GYGFV++ A+ AI
Sbjct: 27 NGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAI 85
Query: 86 IELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYG 137
++NG+ L +K + V +P ++ +K N++V +H+ QE L +F +G
Sbjct: 86 EKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFG 145
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I ++ ++ D G P KG GFV F A A+++LN +I EG
Sbjct: 146 EITSAVVMTD----------AQGKP------KGFGFVAFADQDAAGQAVEKLNDSILEGT 189
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
++V A + R +A L + A++ R++
Sbjct: 190 DCKLSVCRAQKKSER----SAELKRKYEALKQ------------ERVQRYQ--------- 224
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G ++V N+ + D+ L F FG + + KV+ D + + KGFGF
Sbjct: 225 -------------GVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGF 270
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC +EA A+ +N +G + L V+ K
Sbjct: 271 VCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRK 304
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + QE+L +FS GE+ S ++ D + G+GFV + + A +A+
Sbjct: 121 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 179
Query: 87 ELNGLKLQNKSIKVSYARPSS------------EAIKR--------ANLYVSGLPKHMTQ 126
+LN L+ K+S R EA+K+ NLYV + + +
Sbjct: 180 KLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLND 239
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +GTI +++++ D EN R SKG GFV F + EA A+
Sbjct: 240 DGLRDHFSSFGTITSAKVMVD----ENGR------------SKGFGFVCFEKPEEATAAV 283
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
++N + ++P+ V A R LA+ + A +R
Sbjct: 284 TDMNSKMI--GAKPLYVALAQRKEDRRAQLASQYMQRLATLR 323
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
S P + IF+ NL ++ ++ F FG + + KV D + KG+GFV
Sbjct: 16 SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEG-NSKGYGFVH 74
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVS 346
A AI+ +NG L D+ + V
Sbjct: 75 FETEHSAQTAIEKVNGMLLSDKKVYVG 101
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEITGKVIFV 263
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEITG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEITGKVIFV 263
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEITG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 137/332 (41%), Gaps = 65/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L+ F PYG I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ ++ M+ E+ + SKG GFV F AE A+Q LNG G +
Sbjct: 210 TSYKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGK-DMGEGK 252
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R + L R F + H + F
Sbjct: 253 SLYVARAQKKAERQQELK----------RKFEELKQK-----RHESVF------------ 285
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L F P+G + + KV+ D + + KGFGFVC
Sbjct: 286 -----------GVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEG-RSKGFGFVC 333
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
EA A+ LNG +G + L V+ K
Sbjct: 334 FNAASEATCAVTELNGRVVGSKPLYVALAQRK 365
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V +PQ + + L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++NK I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 62 TMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A ++ ++NG +
Sbjct: 122 ATDEKGN----------------SKGYGFVHFETEEAANTSIDKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + +D L + F P+G + + KV+ + K KGFGFV +
Sbjct: 185 ---------VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTE 234
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q+LNG +G+
Sbjct: 235 AAEAAVQALNGKDMGE 250
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + +
Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDD 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYG I +++++ D+ SKG GFV FN EA A+
Sbjct: 302 RLRIAFSPYGNITSAKVMTDEEGR----------------SKGFGFVCFNAASEATCAVT 345
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAA 218
ELNG + S+P+ V A R LA+
Sbjct: 346 ELNGRVV--GSKPLYVALAQRKEERKAHLAS 374
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 143/334 (42%), Gaps = 67/334 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + L F++ G + SCK+ ++ SLGYGFV+Y E A+ AI
Sbjct: 135 NIFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESG--SLGYGFVHYETAEAADAAIKH 192
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + P E + N+Y + +T E+ E LF YG I
Sbjct: 193 VNGMLLNDKKVYVGHHIPRKERQAKIEESRARFTNVYCKNVDADVTDEEFEKLFTKYGKI 252
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ + D+ SKG GFV F H EA+ A+ EL+ + +G +
Sbjct: 253 TSCVLQRDEDGK----------------SKGFGFVNFENHDEAQTAVDELHDSDFKG--Q 294
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R + L R + AA A+F+
Sbjct: 295 KLFVARAQKKSEREEEL----------RRSYEAAKN------EKLAKFQ----------- 327
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ N+ +D L F PFGA+ + K++R P +GFGFVC
Sbjct: 328 -----------GVNLYLKNIPESYDDERLRDEFAPFGAITSCKIMRAPSGV-SRGFGFVC 375
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
+ +EA A+ +NG L +R L V+ K +
Sbjct: 376 YSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDV 409
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 40/261 (15%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y R Q+ + E +N+ V +T EE + LF+ G++ SC
Sbjct: 197 LLNDKKVYVGHHIPRKERQAKIEESRARFTNVYCKNVDADVTDEEFEKLFTKYGKITSCV 256
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELN-----GLKL-----QNKSIKVSYARPSS 107
L RD+ +S G+GFVN+ ++A+ A+ EL+ G KL Q KS + R S
Sbjct: 257 LQRDED-GKSKGFGFVNFENHDEAQTAVDELHDSDFKGQKLFVARAQKKSEREEELRRSY 315
Query: 108 EAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
EA K NLY+ +P+ E L + F P+G I + +I+ S
Sbjct: 316 EAAKNEKLAKFQGVNLYLKNIPESYDDERLRDEFAPFGAITSCKIM----------RAPS 365
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
G +S+G GFV ++ EA A+ E+NG + + + P+ V A R + L A
Sbjct: 366 G------VSRGFGFVCYSAPEEANKAVSEMNGKMLD--NRPLYVALAQRKDVRRQQLEAQ 417
Query: 220 LNAQAAAMRHFAAAMRHFGNP 240
+ + AA + G P
Sbjct: 418 IMQRNQLRLQQQAAAQGMGYP 438
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 70/309 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + ++T+ L +F+ +G V S ++ RD T +SLGY +VN+ D ERA+
Sbjct: 46 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 105
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+LN ++N+ ++ +++ P+ + N+++ L + + L + F +G I++ ++
Sbjct: 106 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 165
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ SG S G GFV + A+ A++ +NG +
Sbjct: 166 ATSE----------SG-------SLGYGFVHYETAEAADAAIKHVNGML----------- 197
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + H ARF
Sbjct: 198 ---------------LNDKKVYVGHHIPRKERQAKIEESRARFT---------------- 226
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+ +C N+ + D +LF +G + + + RD + K KGFGFV N+D
Sbjct: 227 -----NVYC---KNVDADVTDEEFEKLFTKYGKITSCVLQRD-EDGKSKGFGFVNFENHD 277
Query: 325 EAVFAIQSL 333
EA A+ L
Sbjct: 278 EAQTAVDEL 286
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A +AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAANKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G S
Sbjct: 218 LSVKVMRD----------CSGK------SKGFGFVSYEKHEDANKAVEEMNGKEMSGKS- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 261 -IFV-------GRAQ---KKVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAANKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNG 335
+A A++ +NG
Sbjct: 243 DANKAVEEMNG 253
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ KSI V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 70/322 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 122 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 153
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 154 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 183
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D+ L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 184 ---------VYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 233
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
+A A++ +NG + + + V
Sbjct: 234 DANKAVEEMNGKEMSGKAIFVG 255
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 153/333 (45%), Gaps = 68/333 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI
Sbjct: 90 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIE 147
Query: 87 ELNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
++NG+ L + KS K A ++A + N+Y+ + + ++L+ LF +G
Sbjct: 148 KMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGK 207
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
++ +++ D SKG GFV + +H +A A++E+NG E +
Sbjct: 208 TLSVKVMRDPSGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EMSG 249
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ I V GRA+ + QA R F + +R++
Sbjct: 250 KAIFV-------GRAQK---KVERQAELKRKFEQLKQE------RISRYQ---------- 283
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G +++ NL +D L + F PFG++ + KV+ + + KGFGFV
Sbjct: 284 ------------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFV 329
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 330 CFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 362
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + + L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 182 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 240
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 241 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 300
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 301 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 343
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 344 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 385
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 139/333 (41%), Gaps = 67/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L+ F PYG I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ ++ M+ E+ + SKG GFV F AE A+Q LNG + EG S
Sbjct: 210 TSYKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L R F + H + F
Sbjct: 254 --LYVARAQKKAERQQELK----------RKFEELKQK-----RHESVF----------- 285
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D+ L F P+G + + KV+ D + + KGFGFV
Sbjct: 286 ------------GVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEG-RSKGFGFV 332
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C EA A+ LNG +G + L V+ K
Sbjct: 333 CFNAASEATCAVTELNGRVVGSKPLYVALAQRK 365
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V +PQ + + L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++NK I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 62 TMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A ++ ++NG +
Sbjct: 122 ATDEKGN----------------SKGYGFVHFETEEAANTSIDKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + +D L + F P+G + + KV+ + K KGFGFV +
Sbjct: 185 ---------VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTE 234
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q+LNG +G+
Sbjct: 235 AAEAAVQALNGKDMGE 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + +
Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDD 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYG I +++++ D+ SKG GFV FN EA A+
Sbjct: 302 RLRIAFSPYGNITSAKVMTDEEGR----------------SKGFGFVCFNAASEATCAVT 345
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
ELNG + S+P+ V A R LA+ MR
Sbjct: 346 ELNGRVV--GSKPLYVALAQRKEERKAHLASQYMRHMTGMR 384
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 71/332 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPA 214
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 215 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 257
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 258 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 287
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 288 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 336
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 337 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 368
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 73/321 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFGP +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGP---ALSVKVMTD-ESGKSKGFGFVSFERHE 239
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 240 DAQKAVDEMNGKELNGKQIYV 260
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 246
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 247 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 306
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 307 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 349
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 350 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 387
>gi|111226286|ref|XP_001134510.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|122096694|sp|Q1ZXC2.1|PAP1B_DICDI RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein, cytoplasmic 1-B
gi|90970453|gb|EAS66827.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 814
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 76/363 (20%)
Query: 43 LQHLFSSVGE--VESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKV 100
L LFS VG + S + RD T +SLGY +VN++ DAERA+ LN + K ++
Sbjct: 200 LNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERALDTLNYTLVHGKPCRI 259
Query: 101 --SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFV 158
SY P+ N++V L K + L + F +G I++ ++ +K
Sbjct: 260 MWSYRDPTKRKTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSCKVEFEK---------- 309
Query: 159 SGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG---------------------- 196
ISKG G+V F + AE A++++NGT+ G
Sbjct: 310 -------GISKGYGYVHFETNDSAEKAIEKVNGTLILGKPINVERFVSKVERYKVENKVF 362
Query: 197 ---ASEPITVK-----------------FANSPAGRAKALAA-----NLNAQAAAMRHFA 231
A E IT++ N G++K L +AQ A
Sbjct: 363 FRNADESITIEILQQELSNRFGEIESCILKNDANGKSKGLGLVEFKNQEDAQKILTESGA 422
Query: 232 AAMRHFGNPLHHSA-----RFKFAPLTADLLNNSM--LPPKSLHGSGWCIFVYNLAPETE 284
+ S+ P+T D + + + + +F+ N+ +
Sbjct: 423 LIISTIDGTTTVSSNGGTIEINGKPITIDRIKSKVERFTEYRKKTTDLSLFINNIDESID 482
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
+++ + F G + +K+V+D + + KGFGF+ + EA A+ SLNG+ G + +Q
Sbjct: 483 RDLIKEEFAKHGTIIGIKIVQD-ENARNKGFGFISFSEIQEAQKALDSLNGFTFGSKQIQ 541
Query: 345 VSF 347
VSF
Sbjct: 542 VSF 544
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI------------ 85
+ Q+EL + F GE+ESC ++++ +S G G V + EDA++ +
Sbjct: 374 ILQQELSNRF---GEIESC-ILKNDANGKSKGLGLVEFKNQEDAQKILTESGALIISTID 429
Query: 86 -----------IELNGLKLQNKSIKVSYARPSSEAIKRANL--YVSGLPKHMTQEDLENL 132
IE+NG + IK R + K +L +++ + + + ++ ++
Sbjct: 430 GTTTVSSNGGTIEINGKPITIDRIKSKVERFTEYRKKTTDLSLFINNIDESIDRDLIKEE 489
Query: 133 FRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT 192
F +GTII +I+ D EN R+ KG GF+ F++ EA+ A+ LNG
Sbjct: 490 FAKHGTIIGIKIVQD----ENARN------------KGFGFISFSEIQEAQKALDSLNGF 533
Query: 193 IPEGASEPITVKFAN 207
S+ I V F+N
Sbjct: 534 T--FGSKQIQVSFSN 546
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L +N + +++ ++ ++ F+ G + K+++D+ A++ G+GF+++ ++A++A+ L
Sbjct: 472 LFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDEN-ARNKGFGFISFSEIQEAQKALDSL 530
Query: 89 NGLKLQNKSIKVSYARPSSEAI 110
NG +K I+VS++ + I
Sbjct: 531 NGFTFGSKQIQVSFSNKDNNQI 552
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 71/332 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPA 214
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 215 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 257
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 258 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 287
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 288 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 336
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 337 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 368
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 73/321 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFGP +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGP---ALSVKVMTD-ESGKSKGFGFVSFERHE 239
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 240 DAQKAVDEMNGKELNGKQIYV 260
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 246
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 247 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 306
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 307 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 349
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 350 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 387
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 68/328 (20%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+ +++ S S +++L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 37 DGSETPNSAAPSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 96
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ K ++ +++ P+ + N+++ L +
Sbjct: 97 GYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 156
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D+ + SKG GFV + A +A+
Sbjct: 157 KALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAATNAI 200
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H A +
Sbjct: 201 KHVNGML--------------------------LNEKKVFVGHHIA---------KKDRQ 225
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + A+ N ++V NL + + +LFG +G + + + D
Sbjct: 226 SKFEEMKANFTN---------------VYVKNLDTKVTNEEFRELFGKYGDITSASITHD 270
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+T K +GFGFV ++ A A++ LN
Sbjct: 271 SETGKSRGFGFVNFVKHESAAAAVEELN 298
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 112/275 (40%), Gaps = 56/275 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF G++ S + D T +S G+GFVN+ + E A A+
Sbjct: 236 TNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVE 295
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
ELN + + + + V A+ E +++A NLYV L + E
Sbjct: 296 ELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEK 355
Query: 129 LENLFRPYGTIITSRILCDKMAS--------------ENV-------------------- 154
L +LF +G I ++R++ D +A ENV
Sbjct: 356 LRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSDKA 415
Query: 155 -RSFVSGTPEIP-QISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGR 212
+S T E SKG GFV F+ EA A+ E+N + G +P+ V A R
Sbjct: 416 EKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVR 473
Query: 213 AKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
L A++ A+ + AA P A +
Sbjct: 474 KSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 508
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 203
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 204 NGMLLNEK 211
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 71/332 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A + A + N+Y+ + M E L++LF G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPA 214
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 215 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 257
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 258 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 287
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 288 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVC 336
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 337 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 368
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 73/321 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFGP +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGP---ALSVKVMTD-ESGKSKGFGFVSFERHE 239
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 240 DAQKAVDEMNGKELNGKQIYV 260
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 246
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 247 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 306
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 307 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 349
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 350 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 387
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKIIFV 263
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDPNGK----------------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 IIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LF G+ S K++RD +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETNEAAQQAIGT 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A ++A++ N+YV L M ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSQREREAELGAQALEFTNIYVKNLSVDMDEQGLQDLFFAFGNM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ +NG E + +
Sbjct: 218 LSVKVMRDNSGH----------------SRGFGFVNFEKHEEAQKAVDHMNGK--EVSGQ 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ A N + +F L D
Sbjct: 260 QLYV-------GRAQKRAERQN----------------------ELKRRFEQLKQD---- 286
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ G ++V NL D L +F P+G + + KV+ + KGFGFVC
Sbjct: 287 -----RQTRYRGVNLYVKNLDDSISDEKLRTVFSPYGVITSAKVMTEGD--HSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGCIVGTKPLYVALAQRK 371
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L FS VG + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F + A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETNEAAQQAIGTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSQREREAELGAQALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL+ + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 193 ---------IYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDNSGHS-RGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + + L V
Sbjct: 243 EAQKAVDHMNGKEVSGQQLYV 263
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + M ++ LQ LF + G + S K++RD + S G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRD-NSGHSRGFGFVNFEKHEEAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ +E +KR NLYV L ++ E
Sbjct: 250 HMNGKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNLDDSISDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L +F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRTVFSPYGVITSAKVMTEG-----------------DHSKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 353 MNGCIV--GTKPLYVALAQRKEER-KAILTN 380
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 63/330 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + T+ + L F++ G V SCK+ D + QS GYGFV + E AERAI
Sbjct: 134 NVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVD-SNGQSKGYGFVQFENEESAERAISF 192
Query: 88 LNGLKLQNKSIKVSYARPSSE------AIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
L+G+ L +K + V + E + K N+YV L + +T EDLE +F YGTI +
Sbjct: 193 LDGMCLNDKQVYVGFFVRQQERTRTNGSPKFTNVYVKNLSETITNEDLEKVFGVYGTITS 252
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D+ S+G GFV F A A+++LNGT
Sbjct: 253 ALVMKDQTGK----------------SRGFGFVNFQDPDSAAAAVEKLNGTTAHDDKAWY 296
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
+ A R A L A+ R+ R K A L
Sbjct: 297 VGR-----AQRKSEREAELKAKFEQERN------------SRYERLKAANL--------- 330
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++ NL D L +LF FG++ + KV+ D Q KG GFV +
Sbjct: 331 -------------YLKNLDDNINDVKLKELFSEFGSITSCKVMLDHQGV-SKGSGFVAFS 376
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A++ +NG +G + L V+ K
Sbjct: 377 TPEEASRALKEMNGKMIGRKPLYVAIAQRK 406
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N +L V + Q + +E+L LFS + +V S ++ RD+T SLGYG+VN+ +DA A+
Sbjct: 44 NLSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAM 103
Query: 86 IELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN L K I++ S+ PS N+++ L + + L F +GT+++ +
Sbjct: 104 KALNFTPLNGKPIRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCK 163
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+ D SKG GFV+F AE A+ L+G
Sbjct: 164 VAVDSNGQ----------------SKGYGFVQFENEESAERAISFLDG 195
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 45/261 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T+T E+L+ +F G + S +++D+T +S G+GFVN+ + A A+
Sbjct: 224 TNVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQT-GKSRGFGFVNFQDPDSAAAAVE 282
Query: 87 ELNGL-----------KLQNKS-----IKVSYARPSS---EAIKRANLYVSGLPKHMTQE 127
+LNG + Q KS +K + + + E +K ANLY+ L ++
Sbjct: 283 KLNGTTAHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLKNLDDNINDV 342
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L+ LF +G+I + +++ D +SKG GFV F+ EA A++
Sbjct: 343 KLKELFSEFGSITSCKVMLDHQG----------------VSKGSGFVAFSTPEEASRALK 386
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA-AMRHFGNPLHHSAR 246
E+NG + +P+ V A R + A L A A +R A A G P +++
Sbjct: 387 EMNGKMI--GRKPLYVAIAQ----RKEERKARLQAHFALVRAPGALAPLPSGIPGYNAGA 440
Query: 247 FKFAP--LTADLLNNSMLPPK 265
+ AP L M+PP+
Sbjct: 441 PRLAPQQLYFGQGTPGMMPPQ 461
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
S+ SG+ +F+ NL ++ +L + F FG V + KV D + KG+GFV N +
Sbjct: 126 SIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNG-QSKGYGFVQFENEE 184
Query: 325 EAVFAIQSLNGYALGDRLLQVSF 347
A AI L+G L D+ + V F
Sbjct: 185 SAERAISFLDGMCLNDKQVYVGF 207
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 272 WCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
++V +L + L+ LF V +V+V RD G+G+V +N +A A++
Sbjct: 45 LSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMK 104
Query: 332 SLNGYALGDRLLQVSFKTHKP 352
+LN L + +++ F P
Sbjct: 105 ALNFTPLNGKPIRIMFSHRDP 125
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V A ++A + N+Y+ + M E L+ F YG
Sbjct: 158 MNGMLLNDRKVFVGRFKCRREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A+ ++NG G
Sbjct: 218 LSVKVMTDP----------SGK------SKGFGFVSFERHEDANKAVDDMNGKDVNG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 259 --KIMFV----GRAQK---KVERQAELKRRFEQLKQE------RISRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K + A + F N
Sbjct: 163 -----LNDRKVFVGRFKCRREREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L + F +G +VKV+ DP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDP-SGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + +++ V
Sbjct: 243 DANKAVDDMNGKDVNGKIMFV 263
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ FS G+ S K++ D + +S G+GFV++ R EDA +A+
Sbjct: 191 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTD-PSGKSKGFGFVSFERHEDANKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG + K + V A+ E +KR NLY+ L + E
Sbjct: 250 DMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 394
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 139/333 (41%), Gaps = 67/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L+ F PYG I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ ++ M+ E+ + SKG GFV F AE A+Q LNG + EG S
Sbjct: 210 TSYKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L R F + H + F
Sbjct: 254 --LYVARAQKKAERQQELK----------RKFEELKQK-----RHESVF----------- 285
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D+ L F P+G + + KV+ D + + KGFGFV
Sbjct: 286 ------------GVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEG-RSKGFGFV 332
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C EA A+ LNG +G + L V+ K
Sbjct: 333 CFNAASEATCAVTELNGRVVGSKPLYVALAQRK 365
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V +PQ + + L FS+ G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+NK I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 62 TMNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A ++ ++NG +
Sbjct: 122 ATDEKGN----------------SKGYGFVHFETEEAANTSIDKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + +D L + F P+G + + KV+ + K KGFGFV +
Sbjct: 185 ---------VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTE 234
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q+LNG +G+
Sbjct: 235 AAEAAVQALNGKDMGE 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + +
Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDD 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYG I +++++ D+ SKG GFV FN EA A+
Sbjct: 302 RLRIAFSPYGNITSAKVMTDEEGR----------------SKGFGFVCFNAASEATCAVT 345
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
ELNG + S+P+ V A R LA+ MR
Sbjct: 346 ELNGRVV--GSKPLYVALAQRKEERKAHLASQYMRHMTGMR 384
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEITGKVIFV 263
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEITG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 69/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E A++AI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPY-GT 138
+NG+ L ++ + V + E A + N+Y+ M E L F Y G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAEFGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGK 217
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
++ +++ D+ SKG GFV F +H +A+ A+ E+N G +
Sbjct: 218 TLSVKVMMDEGGK----------------SKGFGFVSFERHEDAQKAVDEMNTKELNGRA 261
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
I V A A R L + KF L + ++
Sbjct: 262 --IYVGRAQKKAERQTEL-----------------------------KRKFEMLKQERMS 290
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL D LW+ F PFG + + KV+ + + +GFGFV
Sbjct: 291 KY---------QGVNLYVKNLDDNINDERLWKEFSPFGTITSAKVMME--EGRSRGFGFV 339
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 340 CFSSPEEATKAVTEMNGRIIGSKPLYVALAQRK 372
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 133/322 (41%), Gaps = 71/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L + + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ F A R F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAEFGAKAREFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPF-GAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ N + +D L + F + G +VKV+ D + K KGFGFV +
Sbjct: 193 ---------VYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMD-EGGKSKGFGFVSFERH 242
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
++A A+ +N L R + V
Sbjct: 243 EDAQKAVDEMNTKELNGRAIYV 264
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSS-VGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+N+ + M E L+ F VG+ S K++ D+ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEG-GKSKGFGFVSFERHEDAQKAV 249
Query: 86 IELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
E+N +L ++I V A+ +E +KR NLYV L ++ E
Sbjct: 250 DEMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMSKYQGVNLYVKNLDDNINDE 309
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ ++ S+G GFV F+ EA A+
Sbjct: 310 RLWKEFSPFGTITSAKVMMEEGR-----------------SRGFGFVCFSSPEEATKAVT 352
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+NG I S+P+ V A R L + + A MR
Sbjct: 353 EMNGRII--GSKPLYVALAQRKEERKMHLTSQFMQRLAGMR 391
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A +AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G S
Sbjct: 218 LSVKVMRD----------CSGK------SKGFGFVSYEKHEDANKAVEEMNGKEMSGKS- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 261 -IFV-------GRAQ---KKVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAANKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNG 335
+A A++ +NG
Sbjct: 243 DANKAVEEMNG 253
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ KSI V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ ++ GYGFV++ E A RAI
Sbjct: 100 NIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERGSK--GYGFVHFETQEAANRAIET 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E +K N+Y+ ++T E L+ F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ R++ D+ S+G GFV + H +A+ A+ E+NG E +
Sbjct: 218 LSVRVMRDEKGR----------------SRGFGFVNYAHHEDAQKAVDEMNGK--EMNGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ L Q R KF L D +
Sbjct: 260 IIYV-------GRAQ---KRLERQGELKR-------------------KFDQLKQDRIQR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDERLRKEFSPYGTITSAKVM--TEAGQSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ +
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + +T E+L+ FS+ G+ S +++RD+ +S G+GFVNY EDA++A+
Sbjct: 191 TNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEK-GRSRGFGFVNYAHHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLYV L + E
Sbjct: 250 EMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQRYQGVNLYVKNLDDSIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ + +G SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGTITSAKVMTE-----------AGQ------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A +R
Sbjct: 353 MNGRIV--ATKPLYVALAQRREERKAILTNKYMQRMATLR 390
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P+ N+++ + + + L + F +G I++ ++
Sbjct: 71 TMNYDVIKGRPIRIMWSQRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A A++ +NG +
Sbjct: 131 VCDERG-----------------SKGYGFVHFETQEAANRAIETMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + +F N
Sbjct: 163 ---------------LNDRKVFVGHFKS---------RKEREVEFGTKVMKFTN------ 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I++ N D L + F FG +V+V+RD + + +GFGFV +++
Sbjct: 193 ---------IYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRD-EKGRSRGFGFVNYAHHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + +++ V
Sbjct: 243 DAQKAVDEMNGKEMNGKIIYV 263
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 269 GSGW---CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
G G+ ++V +L P+ + +L+Q F P G + +++V RD T + G+ ++ +
Sbjct: 5 GPGYPLASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPAD 64
Query: 326 AVFAIQSLNGYALGDRLLQVSFKTHKP 352
A A+ ++N + R +++ + P
Sbjct: 65 AECALDTMNYDVIKGRPIRIMWSQRDP 91
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 141/333 (42%), Gaps = 66/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + + L F++ G V SCK+ D+ S GYGFV+Y E A AI
Sbjct: 126 GNIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDEN-GNSRGYGFVHYENGESASAAIQ 184
Query: 87 ELNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L +K + V + A+ + + N+++ L + E + + PYG
Sbjct: 185 HVNGMLLNDKKVYVGHHVSKKERQAKIDEQKSQFTNVFIKNLDVSVDDEKFKQILEPYGE 244
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I+++ + D+ + S+G GFV + H EA A++ LN +G
Sbjct: 245 ILSAVVQKDEQGN----------------SRGFGFVNYKNHEEAAKAVESLNEVEVDGKK 288
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
I A R + L N + A + A K+A
Sbjct: 289 --IFAARAQKKNEREEELRRNY--EQAKLEKLA----------------KYA-------- 320
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL + +D L F PFG + + K++RD + KGFGFV
Sbjct: 321 ------------GVNLYVKNLDDDFDDERLVGEFEPFGTITSAKIMRD-EKGTSKGFGFV 367
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ DEA A+ L+G +G + L VS +
Sbjct: 368 CFSSPDEATKAVSELSGKMIGSKPLYVSLAQRR 400
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q+++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY +D ERA
Sbjct: 36 QSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNLQDGERA 95
Query: 85 IIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+ +LN ++N++ ++ +++ P+ + N+++ L + + + L + F +G +++
Sbjct: 96 LEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSC 155
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
++ D+ + S+G GFV + A A+Q +NG +
Sbjct: 156 KVATDENGN----------------SRGYGFVHYENGESASAAIQHVNGML 190
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 43/256 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y + Q+ ++EQ S N+ + + ++ E+ + + GE+ S
Sbjct: 190 LLNDKKVYVGHHVSKKERQAKIDEQKSQFTNVFIKNLDVSVDDEKFKQILEPYGEILSAV 249
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKR-- 112
+ +D+ S G+GFVNY E+A +A+ LN +++ K I + A+ + E ++R
Sbjct: 250 VQKDEQ-GNSRGFGFVNYKNHEEAAKAVESLNEVEVDGKKIFAARAQKKNEREEELRRNY 308
Query: 113 -------------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLYV L E L F P+GTI +++I+ D+ +
Sbjct: 309 EQAKLEKLAKYAGVNLYVKNLDDDFDDERLVGEFEPFGTITSAKIMRDEKGT-------- 360
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV F+ EA A+ EL+G + S+P+ V A R + L +
Sbjct: 361 --------SKGFGFVCFSSPDEATKAVSELSGKMI--GSKPLYVSLAQRRDVRRQQLESQ 410
Query: 220 LNAQAAAMR--HFAAA 233
+ AQ +R H AAA
Sbjct: 411 I-AQRNQLRLQHQAAA 425
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 139/333 (41%), Gaps = 67/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L+ F PYG I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ ++ M+ E+ + SKG GFV F AE A+Q LNG + EG S
Sbjct: 210 TSYKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L R F + H + F
Sbjct: 254 --LYVARAQKKAERQQELK----------RKFEELKQK-----RHESVF----------- 285
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D+ L F P+G + + KV+ D + + KGFGFV
Sbjct: 286 ------------GVNLYVKNLDDTIDDDRLRVAFSPYGNITSAKVMTDEEG-RSKGFGFV 332
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C EA A+ LNG +G + L V+ K
Sbjct: 333 CFNAPSEATCAVTELNGRVVGSKPLYVALAQRK 365
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V +PQ + + L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++NK I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 62 TMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A ++ ++NG +
Sbjct: 122 ATDEKGN----------------SKGYGFVHFETEEAANTSIDKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + +D L + F P+G + + KV+ + K KGFGFV +
Sbjct: 185 ---------VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTE 234
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q+LNG +G+
Sbjct: 235 AAEAAVQALNGKDMGE 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + +
Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDD 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYG I +++++ D+ SKG GFV FN EA A+
Sbjct: 302 RLRVAFSPYGNITSAKVMTDEEGR----------------SKGFGFVCFNAPSEATCAVT 345
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
ELNG + S+P+ V A R LA+ MR
Sbjct: 346 ELNGRVV--GSKPLYVALAQRKEERKAHLASQYMRHMTGMR 384
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L + KS K A ++A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKH- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NGT+
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGTL----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKHIYV 263
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAHLTNEYMQRMASVR 390
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK+I D+ ++ GYGFV++ + A++AI +
Sbjct: 405 NIFIKNLEKSIDNKALYKTFSAFGNILSCKVISDENGSK--GYGFVHFENQQAADKAIEK 462
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG++L N + V + E A + N+Y+ + M + L +F +G
Sbjct: 463 MNGVRLNNLKVYVGRFKSRKERELELGARAREFTNVYIKNFGEDMDNDRLTEVFGKFGHA 522
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV + +H +A+ A+ E+NG E +
Sbjct: 523 LSVKVMTDE----------SGK------SKGFGFVSYEKHEDAQRAVDEMNGK--EFNGK 564
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ Q RHF + S+R++
Sbjct: 565 RIYV-------GRAQKKGER---QTELKRHFEQVKQ------ERSSRYQ----------- 597
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + +GFGFVC
Sbjct: 598 -----------GVNLYVKNLDDSIDDERLRKAFSPFGTITSAKVMME--GGHSRGFGFVC 644
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + + L V+ K
Sbjct: 645 FSAPEEAAKAVSEMNGKLVATKPLYVALAQRK 676
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAER +
Sbjct: 316 ASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVLE 375
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L F +G I++ ++
Sbjct: 376 TMNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLEKSIDNKALYKTFSAFGNILSCKV 435
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ D+ SKG GFV F A+ A++++NG V+
Sbjct: 436 ISDENG-----------------SKGYGFVHFENQQAADKAIEKMNG-----------VR 467
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
N K ++ A R F N
Sbjct: 468 LNN-----LKVYVGRFKSRKERELELGARAREFTN------------------------- 497
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +++ L ++FG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 498 ---------VYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTD-ESGKSKGFGFVSYEKHE 547
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + + V
Sbjct: 548 DAQRAVDEMNGKEFNGKRIYV 568
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M + L +F G S K++ D++ +S G+GFV+Y + EDA+RA+
Sbjct: 496 TNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDES-GKSKGFGFVSYEKHEDAQRAVD 554
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG + K I V A+ E +KR NLYV L + E
Sbjct: 555 EMNGKEFNGKRIYVGRAQKKGERQTELKRHFEQVKQERSSRYQGVNLYVKNLDDSIDDER 614
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ + S+G GFV F+ EA A+ E
Sbjct: 615 LRKAFSPFGTITSAKVMMEGGH-----------------SRGFGFVCFSAPEEAAKAVSE 657
Query: 189 LNGTIPEGASEPITVKFA 206
+NG + A++P+ V A
Sbjct: 658 MNGKL--VATKPLYVALA 673
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 69/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+ G V S ++ RD T +SLGY +VN+++ DAERA+
Sbjct: 10 ASLYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADAERALD 69
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++++ + PS N+++ L K + + L + F +G I + +I
Sbjct: 70 TMNFDIIKGRPIRITWYQRDPSLRKSGVGNVFIKKLDKSIDNKALYDTFSAFGNISSCKI 129
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F A A++++NG + G
Sbjct: 130 VCDEHG-----------------SRGYGFVHFETDEAARIAIEKVNGMLLNG-------- 164
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ + MR F N
Sbjct: 165 --------KKVFVGRFMSRRERLEVLDLGMRKFNN------------------------- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL+ ET+D L ++F +G + + KV+ D + K K FGFV N +
Sbjct: 192 ---------VYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFENPE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
A A+++LNG ++L V
Sbjct: 243 AAKKAVEALNGNDNAGKILYV 263
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 144/345 (41%), Gaps = 70/345 (20%)
Query: 18 YQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
YQ D + + S N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV+
Sbjct: 86 YQRDPSLRKSGVGNVFIKKLDKSIDNKALYDTFSAFGNISSCKIVCDEHGSR--GYGFVH 143
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAI--------KRANLYVSGLPKHMTQ 126
+ E A AI ++NG+ L K + V E + K N+YV L +
Sbjct: 144 FETDEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEVLDLGMRKFNNVYVKNLSEETDD 203
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E L +F YG II+++++ D + + SK GFV F A+ A+
Sbjct: 204 EKLREIFELYGKIISAKVMIDDSSRK---------------SKQFGFVSFENPEAAKKAV 248
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ LNG + A + + V A + R L
Sbjct: 249 EALNGN--DNAGKILYVGRAQTKIERQAELKE---------------------------- 278
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + + +N G +FV NL +D L + F FG + + KV+
Sbjct: 279 -KFERIRKERINRY---------QGVNLFVKNLDDNIDDKRLRKEFAQFGTITSAKVM-- 326
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ + KGFGFV ++ +EA AI +N + R L V+ K
Sbjct: 327 TENGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALAQRK 371
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 38/215 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + E+L+ +F G++ S K++ D ++ +S +GFV++ E A++A+
Sbjct: 190 NNVYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVE 249
Query: 87 ELNG--------------LKLQNKS-IKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
LNG K++ ++ +K + R E I R NL+V L ++ +
Sbjct: 250 ALNGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKR 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F +GTI +++++ +EN R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFAQFGTITSAKVM-----TENGR------------SKGFGFVYFSSPEEATKAIVE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQ 223
+N I E + P+ V A R KA A LN Q
Sbjct: 353 MNEKIIE--ARPLYVALAQRKEDR-KAYLALLNMQ 384
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS VG + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+HA+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQHAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + HF S R + L A + +
Sbjct: 163 ---------------LNDHKVFVGHFK------------SRREREVELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L +LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGH-SRGFGFVNFETHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYV 263
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A+ AI
Sbjct: 100 NIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQHAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + + V + + E A++ N+YV L + ++ L+ LF +G +
Sbjct: 158 MNGMLLNDHKVFVGHFKSRREREVELGARAMEFTNIYVKNLQADVDEQGLQELFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F H EA+ A+ +NG E +
Sbjct: 218 LSVKVMRDSSGH----------------SRGFGFVNFETHEEAQKAVVHMNGK--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D +N
Sbjct: 260 LLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQDRMNR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRKEFSPYGMITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD ++ S G+GFVN+ E+A++A++
Sbjct: 191 TNIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRD-SSGHSRGFGFVNFETHEEAQKAVV 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 HMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGMITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR G+P
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRALGSPF 396
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 64/334 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N N+ + + + + + + FS G + SCK+ D S GYGFV++ A+ AI
Sbjct: 144 NGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAI 202
Query: 86 IELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYG 137
++NG+ L +K + V +P ++ +K N++V +H+ QE L +F +G
Sbjct: 203 EKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFG 262
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I ++ ++ D G P KG GFV F A A+++LN +I EG
Sbjct: 263 EITSAVVMTD----------AQGKP------KGFGFVAFADQDAAGQAVEKLNDSILEGT 306
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
++V A + R +A L + A++ R++
Sbjct: 307 DCKLSVCRAQKKSER----SAELKRKYEALKQ------------ERVQRYQ--------- 341
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G ++V N+ + D+ L F FG + + KV+ D + + KGFGF
Sbjct: 342 -------------GVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGF 387
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC +EA A+ +N +G + L V+ K
Sbjct: 388 VCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRK 421
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 69/290 (23%)
Query: 47 FSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR-- 104
FS G V S ++ RD T+ SLGY +VN+ + DAERA+ +N + + +++ +++
Sbjct: 77 FSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRD 136
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
P++ N+++ L + + + + + F +G I++ ++ D +
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN------------- 183
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
SKG GFV F A+ A++++NG + K +A
Sbjct: 184 ---SKGYGFVHFETEHSAQTAIEKVNGML----------------LSDKKVYVGKFQPRA 224
Query: 225 AAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETE 284
M+ + + N +FV N +
Sbjct: 225 QRMKELGESGLKYTN----------------------------------VFVKNFGEHLD 250
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
L +F FG + + V+ D Q K KGFGFV + D A A++ LN
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQG-KPKGFGFVAFADQDAAGQAVEKLN 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + QE+L +FS GE+ S ++ D + G+GFV + + A +A+
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Query: 87 ELNGLKLQNKSIKVSYARPSS------------EAIKR--------ANLYVSGLPKHMTQ 126
+LN L+ K+S R EA+K+ NLYV + + +
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLND 356
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +GTI +++++ D EN R SKG GFV F + EA A+
Sbjct: 357 DGLRDHFSSFGTITSAKVMVD----ENGR------------SKGFGFVCFEKPEEATAAV 400
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
++N + ++P+ V A R LA+ + A +R
Sbjct: 401 TDMNSKMI--GAKPLYVALAQRKEDRRAQLASQYMQRLATLR 440
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
P + IF+ NL ++ ++ F FG + + KV D + KG+GFV
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEG-NSKGYGFVHFETE 195
Query: 324 DEAVFAIQSLNGYALGDRLLQVS 346
A AI+ +NG L D+ + V
Sbjct: 196 HSAQTAIEKVNGMLLSDKKVYVG 218
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 66/330 (20%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
N+NL V +P ++ +L LF G++ +++ D T S GYGFV Y A A
Sbjct: 295 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 354
Query: 85 IIELNGLKLQNKSIKVSYAR-PSSE--------AIKRANLYVSGLPKHMTQEDLENLFRP 135
I +NG ++ ++++V A PSSE A LYV L M + L +LF P
Sbjct: 355 IKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLP 414
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPE 195
+G + +++ D +SKG GFV+++ A A+ LNG + +
Sbjct: 415 FGEVTNAKVAKDHTTG---------------LSKGYGFVQYSSPHHAAEAVIHLNGRLVD 459
Query: 196 GASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTAD 255
G I V+ + P + L A ++ D
Sbjct: 460 G--RKIEVRVSGIP--------STLPNSAVESPSTTRTVKEI-----------------D 492
Query: 256 LLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGF 315
+ N ++V N+ + L +LF PFG + + +VV DP T+ KG+
Sbjct: 493 MSN---------------LYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGY 537
Query: 316 GFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
GF+ T+ + A AI ++NG +G ++ V
Sbjct: 538 GFIKFTDSESATKAIAAMNGALVGGEMIIV 567
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 131/334 (39%), Gaps = 88/334 (26%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+ L V + +M + L HLF GEV + K+ +D TT S GYGFV Y A A+I
Sbjct: 392 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 451
Query: 87 ELNGLKLQNKSIKVSYA------------RPSS----EAIKRANLYVSGLPKHMTQEDLE 130
LNG + + I+V + PS+ + I +NLYV +P + + L
Sbjct: 452 HLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLV 511
Query: 131 NLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
LF P+G I +R++ D P+ +KG GF++F A A+ +N
Sbjct: 512 ELFLPFGKITHARVVAD--------------PDTFS-AKGYGFIKFTDSESATKAIAAMN 556
Query: 191 GTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFA 250
G + G E I V+ A L SA
Sbjct: 557 GALVGG--EMIIVRVAG---------------------------------LSPSASISAV 581
Query: 251 PLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY 310
T D +N S L ++ NL + + LF PFG + V + +
Sbjct: 582 QTTQD-INKSRL------------YITNLPRSMTADKMVNLFAPFGQITKVLMNLE---- 624
Query: 311 KCKGFGFVCMTNYDEAVFAIQSLNGYAL-GDRLL 343
+ V + A+ A+Q ++GY + G RL+
Sbjct: 625 ----YSLVWYADAPSAIKAVQHMDGYMVEGKRLV 654
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 135/337 (40%), Gaps = 84/337 (24%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D+N+ S L + +P++MT +++ +LF+ G++ + +L Y V Y
Sbjct: 586 DINK--SRLYITNLPRSMTADKMVNLFAPFGQITKVLM--------NLEYSLVWYADAPS 635
Query: 81 AERAIIELNGLKLQNKSIKVSYA------------RPSSEAIKRANLYVSGLPKHMTQED 128
A +A+ ++G ++ K + V + +P E I ANLYV +P +T++
Sbjct: 636 AIKAVQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKE-IDMANLYVGRVPSSLTEDQ 694
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
+LFRP+G ++ +R+ F + G VRF+ A A+
Sbjct: 695 FIDLFRPFGRVVQARMF----------RF-----------QRYGMVRFDNPSCAAAAIDH 733
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFK 248
L+G G+ + V+ A PA + A L +Q ++ M +
Sbjct: 734 LDGYQIGGSI--LAVRVAGLPA-ESNAAKGALTSQMSSNEQGQIDMTN------------ 778
Query: 249 FAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
++V +L + L LF P G + KVV +
Sbjct: 779 -------------------------LYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERY 813
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
T KGFGFV + A A+ +NGY L +L+V
Sbjct: 814 TGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 850
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 17 TYQSDVNEQN----SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
T Q NEQ +NL V+++P + E L LF G++ K++ ++ T S G+GF
Sbjct: 763 TSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGF 822
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQED 128
V + A A+ +NG L ++V A +A+ Y++ H T D
Sbjct: 823 VKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSS---YMAHFYSHFTMHD 875
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T ERA+
Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERAL 100
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 101 DELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCK 160
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ +SKG GFV + A +A++ +NG +
Sbjct: 161 VAQDEFG----------------VSKGYGFVHYETAEAANNAIKHVNGML---------- 194
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 195 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 224
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N+ PE ED +LF FG + + + RD + K +GFGFV + +
Sbjct: 225 ----------IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEG-KSRGFGFVNFSTH 273
Query: 324 DEAVFAIQSLN 334
+ A A++ +N
Sbjct: 274 ESAQAAVEEMN 284
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 56/250 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + EE + LF GE+ S L RD + +S G+GFVN+ E A+ A+
Sbjct: 223 TNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRD-SEGKSRGFGFVNFSTHESAQAAVE 281
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
E+N +++++ + V A R EA + NLYV L + +
Sbjct: 282 EMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDK 341
Query: 129 LENLFRPYGTIITSRILCD----KMASENVRSFVSGTPEIPQI----------------- 167
L LF PYGTI +++++ D + A+ + S E +
Sbjct: 342 LRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEKEEK 401
Query: 168 --------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRA 213
SKG GFV F+ EA A+ E+N + G +P+ V A R
Sbjct: 402 KEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRR 459
Query: 214 KALAANLNAQ 223
L A++ A+
Sbjct: 460 SQLEASIQAR 469
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHV 190
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 191 NGMLLNDKKVFVGHHISK 208
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L + KS K A ++A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDARKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NGT+
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGTL----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DARKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA +A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDARKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
>gi|303286617|ref|XP_003062598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456115|gb|EEH53417.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 380
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 32/231 (13%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
M+H N S+ +T+Q +Q+SN+ V + + + + L+ +F + G VESC +IRD
Sbjct: 98 MQHARSDN--MSNAATHQ----QQHSNVYVKNLAEDVDELTLKSVFDAFGVVESCCVIRD 151
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRA-------- 113
+T S G+GFV + + AE AI E++G ++ ++++V +A S A A
Sbjct: 152 VSTNTSRGFGFVKFDGVQSAESAIKEMHGKSVRGRTLEVKFANSDSSATTAAAGIGTPSD 211
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGF 173
N+YV GLP T+ +L F+ +G II R+L SGT +
Sbjct: 212 NIYVKGLPPRWTEVELRAFFKVFGAIIECRLL-----------HASGTTTAGAL------ 254
Query: 174 VRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
+RF +A A+ NG +P G + P+ ++FA+S G+AK A + N+ +
Sbjct: 255 IRFASAEQAASAVVTANGRVPAGGAVPLVIRFADS-HGKAKRGANSGNSNS 304
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NLA + ++ L +F FG V++ V+RD T +GFGFV A AI+ +
Sbjct: 119 VYVKNLAEDVDELTLKSVFDAFGVVESCCVIRDVSTNTSRGFGFVKFDGVQSAESAIKEM 178
Query: 334 NGYALGDRLLQVSF 347
+G ++ R L+V F
Sbjct: 179 HGKSVRGRTLEVKF 192
>gi|444516747|gb|ELV11280.1| Poly [ADP-ribose] polymerase 6 [Tupaia chinensis]
Length = 972
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 153/343 (44%), Gaps = 46/343 (13%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDA---ERA 84
L V +P+ + +++L+ LF G + +++D+ T G F+ Y + A + A
Sbjct: 8 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 67
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+ E L ++ I+V A R L+V L K +ED+ LF+P+G I +
Sbjct: 68 LHEQKTLPGMSRPIQVKPAASEGRGEDR-KLFVGMLGKQQGEEDVRRLFQPFGQIQECTV 126
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGASEPITV 203
L RS GT S+G FV+F EA +Q L+G+ GAS + V
Sbjct: 127 L---------RS-PDGT------SRGCAFVKFGSQGEA---LQGLHGSRTMAGASSSLVV 167
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFG------------NPLH------HSA 245
K A++ RA + Q A + G +PL+ + A
Sbjct: 168 KLADTDRERALRRMQQMAGQLGAFHPAPLPLGACGAYTTATNGQPGADPLYSNGLSPYPA 227
Query: 246 RF--KFAPL-TADLLNNSMLPPKSLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNV 301
+ +AP+ TA S LP + G C +F+Y+L E D L Q F PFGAV +
Sbjct: 228 AYPSAYAPVSTACPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELTQTFLPFGAVVSA 287
Query: 302 KVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
KV D T + K FGFV N A AIQ++NG+ +G + L+
Sbjct: 288 KVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLK 330
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ NL + ++PQ EL F G V S K+ D+ T QS +GFV++ A+ A
Sbjct: 256 EGCNLFIYHLPQEFGDAELTQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTA 315
Query: 85 IIELNGLKLQNKSIK 99
I +NG ++ K +K
Sbjct: 316 IQAMNGFQIGMKRLK 330
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 68/328 (20%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+ +++ S S +++L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 37 DGSETPNSAGPSTTQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 96
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ K ++ +++ P+ + N+++ L +
Sbjct: 97 GYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 156
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D+ + SKG GFV + A +A+
Sbjct: 157 KALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAATNAI 200
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H H S
Sbjct: 201 KHVNGML--------------------------LNEKKVFVGH------HIAKKDRQS-- 226
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + A+ N ++V NL E + +LF +G + + + RD
Sbjct: 227 -KFEEMKANFTN---------------VYVKNLDTEVSNEEFRELFEKYGEITSASISRD 270
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+T K +GFGFV ++ A A++ LN
Sbjct: 271 GETGKSRGFGFVNFVKHESAAAAVEELN 298
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 114/290 (39%), Gaps = 59/290 (20%)
Query: 15 RSTYQSDVNEQNSNLIVNYVPQTMTQ---EELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
+ QS E +N YV T+ EE + LF GE+ S + RD T +S G+G
Sbjct: 221 KKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFG 280
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------------AIKRA------ 113
FVN+ + E A A+ ELN + + + + V A+ E +++A
Sbjct: 281 FVNFVKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGV 340
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMAS--------------ENVRSFV- 158
NLYV L + E L +LF +G I ++R++ D ENV+
Sbjct: 341 NLYVKNLTDDIDDEKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEAK 400
Query: 159 ---------------------SGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+ T + SKG GFV F+ EA A+ E+N + G
Sbjct: 401 KESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG- 459
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
+P+ V A R L A++ A+ + AA P A +
Sbjct: 460 -KPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 508
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 203
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 204 NGMLLNEK 211
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A +AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G S
Sbjct: 218 LSVKVMRD----------CSGK------SKGFGFVSYEKHEDANKAVEEMNGKEMSGKS- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 261 -IFV-------GRAQ---KKVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAANKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNG 335
+A A++ +NG
Sbjct: 243 DANKAVEEMNG 253
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ KSI V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ + A+RAI +
Sbjct: 106 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEK 163
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V A ++A + N+Y+ + M E L+ F YG
Sbjct: 164 MNGMLLNDRKVFVGRFKCRREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGKT 223
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F +H +A A+ ++NG G
Sbjct: 224 LSVKVMTDP----------SGK------SKGFGFVSFERHEDANKAVDDMNGKDVNG--- 264
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA+ + QA R F + +R++
Sbjct: 265 --KIMF----VGRAQ---KKVERQAELKRRFEQLKQ------ERISRYQ----------- 298
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 299 -----------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVC 345
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 346 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 377
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ FS G+ S K++ D + +S G+GFV++ R EDA +A+
Sbjct: 197 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTD-PSGKSKGFGFVSFERHEDANKAVD 255
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG + K + V A+ E +KR NLY+ L + E
Sbjct: 256 DMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 315
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ ++ SKG GFV F+ EA A+ E
Sbjct: 316 LRKEFSPFGSITSAKVMLEEGR-----------------SKGFGFVCFSSPEEATKAVTE 358
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 359 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 400
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 129/327 (39%), Gaps = 76/327 (23%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + D E +
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADGEYGNL 70
Query: 87 ELNGLKL-----QNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGT 138
+ + + K+ + + +++++ N+++ L K + + L + F +G
Sbjct: 71 LFDRMDVCFHVAGGKAFTLLWFSERDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 130
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ SKG FV F A+ A++++NG +
Sbjct: 131 ILSCKVVCDENG-----------------SKGYAFVHFETQDAADRAIEKMNGML----- 168
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K + A + F N
Sbjct: 169 -----------LNDRKVFVGRFKCRREREAELGAKAKEFTN------------------- 198
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N + +D L + F +G +VKV+ DP + K KGFGFV
Sbjct: 199 ---------------VYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDP-SGKSKGFGFV 242
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A+ +NG + +++ V
Sbjct: 243 SFERHEDANKAVDDMNGKDVNGKIMFV 269
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 151/339 (44%), Gaps = 48/339 (14%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D + S + N PQ +T+ LQ +FSS G +E CKLIR + ++ YGFV+Y+
Sbjct: 49 DSSTCRSVYVGNIHPQ-VTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRS 103
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYG 137
A +I+ LNG L + IKV++A SS+ + N++V L +T L F Y
Sbjct: 104 AALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYP 163
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+ +R++ D+ S+G GFV F EA+ A+ +LNG
Sbjct: 164 SCSDARVMWDQKTGR---------------SRGFGFVSFRNQQEAQSAINDLNGRWL--G 206
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
S I +A AG + N+ A ++ S +
Sbjct: 207 SRQIRCNWATKGAGGNE---DKPNSDAKSVVELTNGT---------SGEVIYGIQNGKDK 254
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPF--GAVQNVKVVRDPQTYKCKGF 315
+N P +L + ++V NLAPE L + F GA+++V+V RD KGF
Sbjct: 255 SNDEAPENNLQYT--TVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRD------KGF 306
Query: 316 GFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPLP 354
GFV + + EA AIQ N L + ++ S+ + KP P
Sbjct: 307 GFVRYSTHAEAALAIQMGNARILCGKPIKCSWGS-KPTP 344
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 66/237 (27%)
Query: 18 YQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
Y S E S N+ V + +T L FS +++ D+ T +S G+GFV+
Sbjct: 127 YASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVS 186
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYA---------RPSSEA---------------- 109
+ ++A+ AI +LNG L ++ I+ ++A +P+S+A
Sbjct: 187 FRNQQEAQSAINDLNGRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSGEVIY 246
Query: 110 -----------------IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
++ +YV L +T DL F G A E
Sbjct: 247 GIQNGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHALGA----------GAIE 296
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSP 209
+VR Q KG GFVR++ H EA A+Q N I G +PI + + P
Sbjct: 297 DVRV---------QRDKGFGFVRYSTHAEAALAIQMGNARILCG--KPIKCSWGSKP 342
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T ERA+
Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERAL 100
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 101 DELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCK 160
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ +SKG GFV + A +A++ +NG +
Sbjct: 161 VAQDEFG----------------VSKGYGFVHYETAEAANNAIKHVNGML---------- 194
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 195 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 224
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N+ PE ED +LF FG + + + RD + K +GFGFV + +
Sbjct: 225 ----------IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEG-KSRGFGFVNFSTH 273
Query: 324 DEAVFAIQSLN 334
+ A A++ +N
Sbjct: 274 ESAQAAVEEMN 284
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 56/250 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + EE + LF GE+ S L RD + +S G+GFVN+ E A+ A+
Sbjct: 223 TNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRD-SEGKSRGFGFVNFSTHESAQAAVE 281
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
E+N +++++ + V A R EA + NLYV L + +
Sbjct: 282 EMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDK 341
Query: 129 LENLFRPYGTIITSRILCD----KMASENVRSFVSGTPEIPQI----------------- 167
L LF PYGTI +++++ D + A+ + S E +
Sbjct: 342 LRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEKEEK 401
Query: 168 --------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRA 213
SKG GFV F+ EA A+ E+N + G +P+ V A R
Sbjct: 402 KEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRR 459
Query: 214 KALAANLNAQ 223
L A++ A+
Sbjct: 460 SQLEASIQAR 469
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHV 190
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 191 NGMLLNDKKVFVGHHISK 208
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 163/380 (42%), Gaps = 71/380 (18%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ LQ FS +G V S ++ RD T QSLGYG+VN+ + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQAL 71
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN L + I++ +++ PS + N+++ L K + Q++L + F +G I++ +
Sbjct: 72 EVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILSCK 131
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI---------- 193
I+ D+ SKG GFV F + AE A++++N I
Sbjct: 132 IVMDENGQ----------------SKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGK 175
Query: 194 ----PEGASEPITVKFAN------SPAGRAKALAANLN-----AQAAAMRHFAAAMRHFG 238
E S+ VKF N P + L + A M+ + FG
Sbjct: 176 FIPKTERKSQARKVKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFG 235
Query: 239 -----NPLH------------------HSARFKFAPLTADLLNNSMLPPKSLHGSGWCIF 275
+P H + AR + + L + ++ S + +
Sbjct: 236 FVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLN 295
Query: 276 VYNLAPETEDNV----LWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQ 331
V +DN+ L + F G++ + KV++D + KGFGFVC N ++A A+
Sbjct: 296 VNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN-RSKGFGFVCFANPEQAARAVT 354
Query: 332 SLNGYALGDRLLQVSFKTHK 351
+NG +G + L V+ K
Sbjct: 355 DMNGTIIGSKPLYVALAQRK 374
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL V P E+L+ +FS GE++S +++D +S G+GFV Y + AE A+
Sbjct: 192 NNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKD-NEGKSKGFGFVCYLDPDHAENAVR 250
Query: 87 ELNGLKLQNK-------------------SIKVSYARPSSEAIKRANLYVSGLPKHMTQE 127
++G +++ + I+ A S + NLYV L ++ +
Sbjct: 251 TMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLNVNLYVKNLDDNIDDK 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
LE F +G+I +++++ D N R SKG GFV F +A A+
Sbjct: 311 RLEEAFSVHGSITSAKVMKDA----NNR------------SKGFGFVCFANPEQAARAVT 354
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
++NGTI S+P+ V A R L + A R A+M
Sbjct: 355 DMNGTII--GSKPLYVALAQRKEDRRAKLIEEHQQRLAQYRAPVASM 399
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 3 KHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDK 62
+ EE+ + R+ QS+ N NL V + + + L+ FS G + S K+++D
Sbjct: 273 RQEELKQKIEKQRAERQSNY-MLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDA 331
Query: 63 TTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+S G+GFV + E A RA+ ++NG + +K + V+ A+ + +RA L
Sbjct: 332 NN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKED--RRAKL 381
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 68/312 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 61 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTTDGEKAL 120
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 121 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 180
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 181 VAQDESGA----------------SKGYGFVHYETDEAASQAIKHVNGML---------- 214
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 215 ----------------LNEKKVFVGH------HIPKKDRQS---KFEEMKANFTN----- 244
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ E D +LF FG V + + RD T K +GFGFV N+
Sbjct: 245 ----------IYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINH 294
Query: 324 DEAVFAIQSLNG 335
+ A A+ LNG
Sbjct: 295 EHAATAVDELNG 306
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P T EE + LF G+V S L RD+ T +S G+GFVN+ E A A+
Sbjct: 243 TNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVD 302
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEA--IKRA------NLYVSGLPKHMTQED 128
ELNG + + + V A R S EA I++A NLYV L + E
Sbjct: 303 ELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDDEK 362
Query: 129 LENLFRPYGTIITSRILCDKMA---------------------SENVRSFVSGTPEIPQI 167
L LF P+G I +++++ D A +E E P+
Sbjct: 363 LRELFTPFGAITSAKVMRDSAAETAEAEKKEEEKNKENKKEGDAEEGEKADGEKKEAPKS 422
Query: 168 -------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
SKG GFV F+ EA A+ ++N + G +P+ V A R L A++
Sbjct: 423 EKRTVGKSKGFGFVCFSNPDEATKAIADMNQNMVNG--KPLYVALAQRKDVRKGQLEASI 480
Query: 221 NAQAAAMRHFAAA 233
A+ AAA
Sbjct: 481 QARNQIRMQQAAA 493
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF G+V +++V RD T + G+ +V + A++
Sbjct: 63 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTTDGEKALEE 122
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 123 LNYTLIKGRPCRIMWSQRDP 142
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D ++ KG+GFV + A AI+ +
Sbjct: 152 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-ESGASKGYGFVHYETDEAASQAIKHV 210
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 211 NGMLLNEK 218
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 69/314 (21%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 61 QASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEK 120
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 121 ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 180
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A A++ +NG +
Sbjct: 181 CKVAQDENGN----------------SKGYGFVHYETDEAASQAIKHVNGML-------- 216
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + H H S KF + A+ N
Sbjct: 217 ------------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN--- 246
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
I++ N++ E D+ LF PFG V + + RD Q K +GFGFV T
Sbjct: 247 ------------IYIKNISGEVTDDEFRDLFTPFGDVTSSSLARD-QEGKSRGFGFVNFT 293
Query: 322 NYDEAVFAIQSLNG 335
++ A A+ LNG
Sbjct: 294 THEAAAKAVDDLNG 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 19/139 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +T +E + LF+ G+V S L RD+ +S G+GFVN+ E A +A+
Sbjct: 245 TNIYIKNISGEVTDDEFRDLFTPFGDVTSSSLARDQE-GKSRGFGFVNFTTHEAAAKAVD 303
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
+LNG + + + V A R S EA + NLY+ L + E
Sbjct: 304 DLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKANKYQGVNLYIKNLDDDVDDEK 363
Query: 129 LENLFRPYGTIITSRILCD 147
L LF +G I +++++ D
Sbjct: 364 LRQLFADFGPITSAKVMRD 382
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF G+V +++V RD T + G+ +V + A++
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 124
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 125 LNYTLIKGRPCRIMWSQRDP 144
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 154 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQAIKHV 212
Query: 334 NGYALGDRLLQVS 346
NG L ++ + V
Sbjct: 213 NGMLLNEKKVYVG 225
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAITT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ ++NG E +
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFQKHEEAQKAVMDMNGK--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ + Q+ R +F L D L
Sbjct: 260 LLYV-------GRAQ---KRVERQSELKR-------------------RFEQLKQDRLTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG LG + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRILGTKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 138/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDDHG-----------------SRGFGFVHFETHEAAQQAITTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREVELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDSGH-SRGFGFVNFQKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVMDMNGKEVSGRLLYV 263
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD + S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDS-GHSRGFGFVNFQKHEEAQKAVM 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + +R G PL
Sbjct: 353 MNGRIL--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTVRALGGPL 396
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S + RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RDP + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + +++ V
Sbjct: 243 DANKAVEEMNGKEISGKVIFV 263
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 218 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 259 --KVIFV----GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T ERA+
Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERAL 100
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 101 DELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCK 160
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ +SKG GFV + A +A++ +NG +
Sbjct: 161 VAQDEFG----------------VSKGYGFVHYETAEAANNAIKHVNGML---------- 194
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 195 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 224
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N+ PE ED +LF FG + + + RD + K +GFGFV + +
Sbjct: 225 ----------IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEG-KSRGFGFVNFSTH 273
Query: 324 DEAVFAIQSLN 334
+ A A++ +N
Sbjct: 274 ESAQAAVEEMN 284
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 56/250 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + EE + LF GE+ S L RD + +S G+GFVN+ E A+ A+
Sbjct: 223 TNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRD-SEGKSRGFGFVNFSTHESAQAAVE 281
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
E+N +++++ + V A R EA + NLYV L + +
Sbjct: 282 EMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDK 341
Query: 129 LENLFRPYGTIITSRILCD----KMASENVRSFVSGTPEIPQI----------------- 167
L LF PYGTI +++++ D + A+ + S E +
Sbjct: 342 LRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEKEEE 401
Query: 168 --------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRA 213
SKG GFV F+ EA A+ E+N + G +P+ V A R
Sbjct: 402 KEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRR 459
Query: 214 KALAANLNAQ 223
L A++ A+
Sbjct: 460 SQLEASIQAR 469
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHV 190
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 191 NGMLLNDKKVFVGHHISK 208
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 71/332 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + E A + N+Y+ + M E L++LF G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPA 214
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 215 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 257
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 258 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 287
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 288 Y---------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVC 336
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 337 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 368
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 73/321 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A++++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFGP +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGP---ALSVKVMTD-ESGKSKGFGFVSFERHE 239
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 240 DAQKAVDEMNGKELNGKQIYV 260
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 246
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 247 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 306
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 307 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 349
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 350 MNGRIV--ATKPLYVALAQRKEERQAHLTNQYMQRMASVR 387
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 134/316 (42%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 19 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 78
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N + K I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 79 TMNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKV 138
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ ++ SKG GFV F A+ A++++NG + EG
Sbjct: 139 ANDEESN----------------SKGYGFVHFETEESAQKAIEKVNGMLLEG-------- 174
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K +AA MR R F N
Sbjct: 175 --------KKVYVGKFQPRAARMREMGETARRFTN------------------------- 201
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+F+ N A E + L +LF FG + + V+ D K KGFGFV N +
Sbjct: 202 ---------VFIKNFADELDKEKLEKLFAKFGKITSCAVMSDADG-KSKGFGFVAFENPE 251
Query: 325 EAVFAIQSLNGYALGD 340
+A A+ ++ Y L D
Sbjct: 252 DAEKAVNEMHEYQLPD 267
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 143/333 (42%), Gaps = 66/333 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS G + SCK+ D+ + S GYGFV++ E A++AI +
Sbjct: 108 NIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEES-NSKGYGFVHFETEESAQKAIEK 166
Query: 88 LNGLKLQNKSIKVSYARPSS-------EAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L+ K + V +P + E +R N+++ + +E LE LF +G I
Sbjct: 167 VNGMLLEGKKVYVGKFQPRAARMREMGETARRFTNVFIKNFADELDKEKLEKLFAKFGKI 226
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG-TIPEGAS 198
+ ++ D SKG GFV F +AE A+ E++ +P+
Sbjct: 227 TSCAVMSDADGK----------------SKGFGFVAFENPEDAEKAVNEMHEYQLPDSER 270
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + A N ++A ++ R+ + R++
Sbjct: 271 KLYVCR------------AQKKNERSAELKR-----RYEQQKVERMQRYQ---------- 303
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D VL Q F +G + + KV+ D + KGFGFV
Sbjct: 304 ------------GVNLYVKNLDDTVDDEVLRQNFESYGKITSAKVMCDDNG-RSKGFGFV 350
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C DEA A+ +NG + + L V+ K
Sbjct: 351 CFEKPDEATKAVTEMNGKMMCTKPLYVALAQRK 383
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +E+L+ LF+ G++ SC ++ D +S G+GFV + EDAE+A+
Sbjct: 200 TNVFIKNFADELDKEKLEKLFAKFGKITSCAVMSD-ADGKSKGFGFVAFENPEDAEKAVN 258
Query: 87 ELNGLKL-----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQ 126
E++ +L ++ +K Y + E ++R NLYV L +
Sbjct: 259 EMHEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVDD 318
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E L F YG I +++++CD +N R SKG GFV F + EA A+
Sbjct: 319 EVLRQNFESYGKITSAKVMCD----DNGR------------SKGFGFVCFEKPDEATKAV 362
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR-HFAAAM 234
E+NG + ++P+ V A R LA+ + A++R H A AM
Sbjct: 363 TEMNGKMM--CTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHNAGAM 409
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SCK++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKLQNKSIKVSY--ARPSSEA-----IKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L ++ + V +R EA +K N+Y+ + M E L++LF +G
Sbjct: 158 MNGTLLNDRKVFVGRFKSRKEREAELGAKVKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + KF + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRKFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NGT+
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGTL----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A ++ F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKVKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEDRQAHLTNEYMQRMASVR 390
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 70/305 (22%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L FS G V S ++ RD T +SLGY +VN+ + DAERA+ +N ++ K I++ +
Sbjct: 2 LYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMW 61
Query: 103 AR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSG 160
++ PS N+++ L K + + L + F +G I++ +++CD+
Sbjct: 62 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG---------- 111
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
SKG FV F A+ A++++NG + K
Sbjct: 112 -------SKGYAFVHFETQEAADKAIEKMNGML----------------LNDRKVFVGRF 148
Query: 221 NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLA 280
++ A + F N +++ N
Sbjct: 149 KSRKEREAELGAKAKEFTN----------------------------------VYIKNFG 174
Query: 281 PETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
E +D L +LF FG +VKV+RDP + K KGFGFV +++A A++ +NG +
Sbjct: 175 EEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISG 233
Query: 341 RLLQV 345
+++ V
Sbjct: 234 KIIFV 238
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 75 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 132
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 133 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 192
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 193 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EISGK 234
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 235 IIFV-------GRAQ---KKVERQAELKR-------------------KFEQLKQERISR 265
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 266 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 314
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 315 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 346
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 166 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 224
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 225 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 284
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 285 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 327
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 328 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 369
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 140/332 (42%), Gaps = 64/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SC++ D+ S GYGFV++ E A AI +
Sbjct: 100 NVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQ-GNSRGYGFVHFETEEAANEAINK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P SE + N+YV + + L+ +F YG I
Sbjct: 159 VNGMLLNEKKVFVGKFVPRSERERMMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++R++ D+ S+G GFV F AE A++ELN G +
Sbjct: 219 TSARVMTDQTGK----------------SRGFGFVSFENPDNAEQAVKELNDK-ELGNGK 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ A L+ + KF L + +
Sbjct: 262 KIYV-------GRAQKKAERLS----------------------DLKRKFEQLKMERMTR 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ D + KGFGFVC
Sbjct: 293 Y---------QGVNLYVKNLDDVIDDERLRREFAPYGTITSAKVMMDSTGARSKGFGFVC 343
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 344 FSSPEEATKAVTEMNGRIIVQKPLYVALAQRK 375
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L F G V S ++ RD + +SLGY +VN+++ DAERA+
Sbjct: 11 ASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+N+ +++ +++ PS N+++ L K + + + + F +G I++ R+
Sbjct: 71 TMNFEPLKNRPMRIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + S+G GFV F A A+ ++NG +
Sbjct: 131 ATDEQGN----------------SRGYGFVHFETEEAANEAINKVNGML----------- 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + F + S R + A L N
Sbjct: 164 ---------------LNEKKVFVGKF----------VPRSERERMMGDKARLFTN----- 193
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N E +D L ++F +G + + +V+ D QT K +GFGFV N D
Sbjct: 194 ---------VYVKNFGEELDDGKLKEMFEVYGKITSARVMTD-QTGKSRGFGFVSFENPD 243
Query: 325 EAVFAIQSLNGYALGD 340
A A++ LN LG+
Sbjct: 244 NAEQAVKELNDKELGN 259
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 44/258 (17%)
Query: 12 QSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
+S R D +N+ V + + +L+ +F G++ S +++ D+T +S G+G
Sbjct: 177 RSERERMMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQT-GKSRGFG 235
Query: 72 FVNYYRTEDAERAIIELNGLKLQN-KSIKVSYARPSSEA---IKR--------------- 112
FV++ ++AE+A+ ELN +L N K I V A+ +E +KR
Sbjct: 236 FVSFENPDNAEQAVKELNDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQG 295
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NLYV L + E L F PYGTI +++++ D + SKG G
Sbjct: 296 VNLYVKNLDDVIDDERLRREFAPYGTITSAKVMMDSTGAR---------------SKGFG 340
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
FV F+ EA A+ E+NG I +P+ V A R L++ ++ F
Sbjct: 341 FVCFSSPEEATKAVTEMNGRII--VQKPLYVALAQRKEDRRAHLSSQF------VQRFTG 392
Query: 233 AMRHFGN-PLHHSARFKF 249
FG P +HS F
Sbjct: 393 VRVPFGQMPFNHSTPTSF 410
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 150/372 (40%), Gaps = 103/372 (27%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D++ A S GYGFV+Y E A +AI
Sbjct: 149 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDESGA-SKGYGFVHYETDEAAAQAIK 207
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + N+YV +P T+E+ LF +G
Sbjct: 208 HVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATEEEFRELFEKFGD 267
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ ++ + D + + S+G GFV F H A A+ ELNG +G
Sbjct: 268 VTSASLARDTESGK---------------SRGFGFVNFINHEHAATAVDELNGKDFKG-- 310
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L R + AA + +++++
Sbjct: 311 QDLYVGRAQKKHEREEEL----------RRSYEAAR------MEKASKYQ---------- 344
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD------------ 306
G ++V NL E +D L +LF PFGA+ + KV+RD
Sbjct: 345 ------------GVNLYVKNLDDEIDDEKLRELFAPFGAITSAKVMRDTPAETADAEDKK 392
Query: 307 -----------------------PQTY----KCKGFGFVCMTNYDEAVFAIQSLNGYALG 339
P+ K KGFGFVC N DEA A+ +N +
Sbjct: 393 EKDEEKNKENKKEGEAETEEASAPKAKRPLGKSKGFGFVCFNNPDEATKAVSDMNQRMVS 452
Query: 340 DRLLQVSFKTHK 351
++ L V+ K
Sbjct: 453 NKPLYVALAQRK 464
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 68/312 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAITRRSLGYAYVNYNTTVDGEKAL 119
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 180 VAQDESGA----------------SKGYGFVHYETDEAAAQAIKHVNGML---------- 213
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 214 ----------------LNEKKVFVGH------HIPKKDRQS---KFEEMKANFTN----- 243
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ E + +LF FG V + + RD ++ K +GFGFV N+
Sbjct: 244 ----------IYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINH 293
Query: 324 DEAVFAIQSLNG 335
+ A A+ LNG
Sbjct: 294 EHAATAVDELNG 305
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 44/249 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P T+EE + LF G+V S L RD + +S G+GFVN+ E A A+
Sbjct: 242 TNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATAVD 301
Query: 87 ELNGLKLQNKSIKVSYARPS---SEAIKRA---------------NLYVSGLPKHMTQED 128
ELNG + + + V A+ E ++R+ NLYV L + E
Sbjct: 302 ELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQGVNLYVKNLDDEIDDEK 361
Query: 129 LENLFRPYGTIITSRILCDKMAS---------------------ENVRSFVSGTPEIPQ- 166
L LF P+G I +++++ D A + + P+ +
Sbjct: 362 LRELFAPFGAITSAKVMRDTPAETADAEDKKEKDEEKNKENKKEGEAETEEASAPKAKRP 421
Query: 167 --ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
SKG GFV FN EA A+ ++N + +++P+ V A R L A++ A+
Sbjct: 422 LGKSKGFGFVCFNNPDEATKAVSDMNQRMV--SNKPLYVALAQRKDVRKSQLEASIQARN 479
Query: 225 AAMRHFAAA 233
AAA
Sbjct: 480 QIRMQQAAA 488
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q +T+ L FS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F AE A+ ++NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAAERAIDKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGARAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++FG +G +VKV+ D + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKEMFGKYGPALSVKVMTD-DSGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + + + V
Sbjct: 243 DAQKAVDDMNGKDMNGKAIYV 263
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 35/168 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ +F G S K++ D + +S G+GFV++ R EDA++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDS-GKSKGFGFVSFERHEDAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARP--------------SSEAIKR---ANLYVSGLPKHMTQEDL 129
++NG + K+I V A+ + I R NLYV L + E L
Sbjct: 250 DMNGKDMNGKAIYVGRAKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 309
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFN 177
F P+GTI +++++ E R SKG GFV F+
Sbjct: 310 RKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFS 340
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 266 SLHGSGWC-IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
SL SG IF+ NL ++ L+ F FG + + KVV D KG+GFV +
Sbjct: 92 SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQE 149
Query: 325 EAVFAIQSLNGYALGDRLLQVS-FKTHK 351
A AI +NG L DR + V FK+ K
Sbjct: 150 AAERAIDKMNGMLLNDRKVFVGRFKSRK 177
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V +P +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A++A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQNAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREVELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ ++NG + RLL V
Sbjct: 243 EAQKAVVNMNGREVSGRLLYV 263
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A+ AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQNAIST 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ +NG E +
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFEKHEEAQKAVVNMNGR--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D L
Sbjct: 260 LLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQDRLTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD + S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDS-GHSRGFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR G P+
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRALGGPV 396
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A +AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAANKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E+L LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G S
Sbjct: 218 LSVKVMRD----------CSGK------SKGFGFVSYEKHEDANKAVEEMNGKEMSGKS- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 261 -IFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 YQ---------GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAANKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 243 DANKAVEEMNGKEMSGKSIFV 263
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ KSI V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 394
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 68/305 (22%)
Query: 55 SCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQN--------KSIKVSYARPS 106
+CK++RD+ S GYGFV++ E AERAI ++NG+ L + KS K A
Sbjct: 1 ACKVVRDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 58
Query: 107 SEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQ 166
+ A + N+Y+ + M E L++LF +G ++ +++ D+ SG
Sbjct: 59 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE----------SGK----- 103
Query: 167 ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAA 226
SKG GFV F +H +A+ A+ E+NG G I V A R L
Sbjct: 104 -SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ--IYVGRAQKKVERQTEL---------- 150
Query: 227 MRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDN 286
+ KF + D + G ++V NL +D
Sbjct: 151 -------------------KRKFEQMKQDRITRY---------QGVNLYVKNLDDGIDDE 182
Query: 287 VLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVS 346
L + F PFG + + KV+ + + KGFGFVC ++ +EA A+ +NG + + L V+
Sbjct: 183 RLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 240
Query: 347 FKTHK 351
K
Sbjct: 241 LAQRK 245
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+
Sbjct: 65 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 123
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG +L K I V A+ E +KR NLYV L + E
Sbjct: 124 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 183
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ E R SKG GFV F+ EA A+ E
Sbjct: 184 LRKEFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTE 226
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I A++P+ V A R L + A++R
Sbjct: 227 MNGRI--VATKPLYVALAQRKEERQAHLTNQYMQRMASVR 264
>gi|255075981|ref|XP_002501665.1| predicted protein [Micromonas sp. RCC299]
gi|226516929|gb|ACO62923.1| predicted protein [Micromonas sp. RCC299]
Length = 667
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
Q+SN+ V + + + + L+ +F G VESC +IRD +T S G+GFV + + AE
Sbjct: 27 GSQHSNVYVKNLSEDVDELTLKGVFDKFGAVESCCVIRDVSTNSSRGFGFVKFMQVHQAE 86
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRA--------NLYVSGLPKHMTQEDLENLFR 134
AI E+NG ++ K ++V +A S A A N+YV GLP T+ +L F+
Sbjct: 87 AAIKEMNGKVIRGKVLEVKFANSDSSATTAASGVGTISDNIYVKGLPPLWTEVELRAFFK 146
Query: 135 PYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIP 194
+GTII R+L SGT + +RF+ +A A+ NG +P
Sbjct: 147 IFGTIIECRLL-----------HASGTTTAGAL------IRFSSMEQAASAVVTANGRVP 189
Query: 195 EGASEPITVKFANS 208
G P+ ++FA+S
Sbjct: 190 AGGQVPLVIRFADS 203
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
++V NL+ + ++ L +F FGAV++ V+RD T +GFGFV +A AI+ +
Sbjct: 33 VYVKNLSEDVDELTLKGVFDKFGAVESCCVIRDVSTNSSRGFGFVKFMQVHQAEAAIKEM 92
Query: 334 NGYALGDRLLQVSF 347
NG + ++L+V F
Sbjct: 93 NGKVIRGKVLEVKF 106
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 142/333 (42%), Gaps = 69/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D+ QS GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDKKIDNKAMYDTFSAFGNILSCKVAQDEK-GQSKGYGFVHFETEESANTSIEK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V E K N+YV + +T+E L ++F +G I
Sbjct: 150 VNGMLLNEKKVYVGRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALRDMFEKFGPI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ R++ S+G GFV F + +AE A+Q+LNG + +G
Sbjct: 210 TSHRVMTKDGK-----------------SRGFGFVAFEKPEDAEEAVQKLNGKELSDGKV 252
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ N + +F L + L
Sbjct: 253 LYV---------GRAQK----------------------KNERQMELKRRFEQLKMERLT 281
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
HG ++V NL +D L + F P+G + + KV+ D + KGFGFV
Sbjct: 282 R-------YHGVN--LYVKNLDDTIDDERLRKEFAPYGTITSAKVMLDEG--RSKGFGFV 330
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + DEA A+ +NG +G + L V+ K
Sbjct: 331 CFSAPDEATKAVTEMNGRIVGSKPLYVALAQRK 363
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 70/316 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHSDITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 62 TMNFDPIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ SKG GFV F A +++++NG +
Sbjct: 122 AQDEKGQ----------------SKGYGFVHFETEESANTSIEKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNEKKV----------YVGRFISRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N + + L +F FG + + +V+ + K +GFGFV +
Sbjct: 185 ---------VYVKNFGEDLTEEALRDMFEKFGPITSHRVM--TKDGKSRGFGFVAFEKPE 233
Query: 325 EAVFAIQSLNGYALGD 340
+A A+Q LNG L D
Sbjct: 234 DAEEAVQKLNGKELSD 249
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 46/247 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T+E L+ +F G + S +++ +S G+GFV + + EDAE A+
Sbjct: 183 TNVYVKNFGEDLTEEALRDMFEKFGPITSHRVM--TKDGKSRGFGFVAFEKPEDAEEAVQ 240
Query: 87 ELNGLKLQN-KSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
+LNG +L + K + V A+ +E +KR NLYV L + E
Sbjct: 241 KLNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDE 300
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYGTI +++++ D+ SKG GFV F+ EA A+
Sbjct: 301 RLRKEFAPYGTITSAKVMLDEGR-----------------SKGFGFVCFSAPDEATKAVT 343
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
E+NG I S+P+ V A R LA+ + ++R M+H G S +
Sbjct: 344 EMNGRIV--GSKPLYVALAQRKEERKSHLASQYIQRVNSLR-----MQHIGQVYQQSGSY 396
Query: 248 KFAPLTA 254
F P A
Sbjct: 397 -FMPTIA 402
>gi|495594|gb|AAA70421.1| poly(A)-binding protein [Drosophila melanogaster]
Length = 632
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 139/331 (41%), Gaps = 65/331 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDK 149
Query: 88 LNGLKLQNKSIKVSYARPSSE------AIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+NG+ L K + V P E A N+YV + E L+ F PYG I +
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEQELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITS 209
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGASEP 200
++ M+ E+ + SKG GFV F AE A+Q LNG + EG S
Sbjct: 210 YKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGKDMGEGKS-- 251
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
+ V A A R + L R F + H + F
Sbjct: 252 LYVARAQKKAERQQELK----------RKFEELKQK-----RHESVF------------- 283
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
G ++V NL +D+ L F P+G + + KV+ D + + KGFGFVC
Sbjct: 284 ----------GVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEG-RSKGFGFVCF 332
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
EA A+ LNG +G + L V+ K
Sbjct: 333 NPESEATCAVTELNGRVVGSKPLYVALAQRK 363
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 181 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 239
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + +
Sbjct: 240 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDD 299
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F PYG I +++++ D+ SKG GFV FN EA A+
Sbjct: 300 RLRIAFSPYGNITSAKVMTDEEGR----------------SKGFGFVCFNPESEATCAVT 343
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
ELNG + S+P+ V A R LA+ MR
Sbjct: 344 ELNGRVV--GSKPLYVALAQRKEERKADLASQYMRHMTGMR 382
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V +PQ + + L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++NK I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 62 TMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
D+ + SKG GFV F A ++ ++NG + G
Sbjct: 122 ATDEKGN----------------SKGYGFVHFETEEAANTSIDKVNGMLLNG 157
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ DK S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDKHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG S+ GFV F +H EA+ A+ +NG G
Sbjct: 218 LSVKVMRDN----------SGR------SRCFGFVNFEKHEEAQKAVVHMNGKEVSG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ L A+ AQ R + + KF + D L+
Sbjct: 259 --------------RLLYAS-RAQKRVERQ-------------NELKRKFEQMKQDRLSR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GSHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 139/322 (43%), Gaps = 70/322 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CDK S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDKHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRRERAAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + + FGFV ++
Sbjct: 193 ---------IYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
EA A+ +NG + RLL S
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAS 264
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + +S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + S A+ E +KR NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGSH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRI--VGTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 113 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 170
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 171 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 230
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG G
Sbjct: 231 LSVKVMRDP----------SGK------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 271
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 272 --KVIF----VGRAQ---KKVERQAELKR-------------------KFEQLKQERISR 303
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 304 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 352
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 353 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 384
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 135/334 (40%), Gaps = 83/334 (24%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED------ 80
++L V + +T+ L FS G V S + RD T +SLGY +VN+ + D
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTST 70
Query: 81 -------AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLEN 131
ERA+ +N ++ K I++ +++ PS N+++ L K + + L +
Sbjct: 71 SSSPLTVTERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYD 130
Query: 132 LFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
F +G I++ +++CD+ SKG FV F A+ A++++NG
Sbjct: 131 TFSAFGNILSCKVVCDENG-----------------SKGYAFVHFETQEAADKAIEKMNG 173
Query: 192 TIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAP 251
+ K ++ A + F N
Sbjct: 174 ML----------------LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------ 205
Query: 252 LTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYK 311
+++ N E +D L +LF FG +VKV+RDP + K
Sbjct: 206 ----------------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGK 242
Query: 312 CKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
KGFGFV +++A A++ +NG + +++ V
Sbjct: 243 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFV 276
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD + +S G+GFV+Y + EDA +A+
Sbjct: 204 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVE 262
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 263 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 322
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 323 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 365
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 366 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 407
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L FS+ G + SCK+ D ++ QS GYGFV + E A++AI +
Sbjct: 117 NIFIKNLDRAIDHKALHDTFSTFGNILSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEK 175
Query: 88 LNGLKLQNKSIKVS-YAR-----PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
LNG+ L +K + V + R +++ K N++V L + T ++L+N+F +GTI +
Sbjct: 176 LNGMLLNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITS 235
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D SK GFV F +A A++ LNG
Sbjct: 236 AVVMRDGDGK----------------SKCFGFVNFENADDAARAVEALNGK--------- 270
Query: 202 TVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
KF + G+A+ + N + F +M+ +
Sbjct: 271 --KFDDKEWYVGKAQKKSEREN---ELKQRFEQSMKEAADKYQ----------------- 308
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D+ L +LF PFG + + KV+RDP +G GFV
Sbjct: 309 -----------GANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGI-SRGSGFVA 356
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ DEA A+ +NG + + L V+ K
Sbjct: 357 FSTPDEASRALLEMNGKMVVSKPLYVTLAQRK 388
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T +EL+++F G + S ++RD +S +GFVN+ +DA RA+
Sbjct: 207 NNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRD-GDGKSKCFGFVNFENADDAARAVE 265
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG K +K V A+ SE + ANLYV L + +
Sbjct: 266 ALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSLGDDK 325
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF P+GTI + +++ D IS+G GFV F+ EA A+ E
Sbjct: 326 LKELFSPFGTITSCKVMRDPNG----------------ISRGSGFVAFSTPDEASRALLE 369
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + S+P+ V A R + A L AQ A MR
Sbjct: 370 MNGKMV--VSKPLYVTLAQ----RKEDRRARLQAQFAQMR 403
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L LF+ +G+V S ++ RD T+ +SLGYG+VN+ +DA RA+
Sbjct: 28 TSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALD 87
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L N+ I++ Y+ PS + N+++ L + + + L + F +G I++ ++
Sbjct: 88 VLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKV 147
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D SKG GFV+F+ A+ A+++LNG +
Sbjct: 148 ATDSSGQ----------------SKGYGFVQFDNEESAQKAIEKLNGML 180
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q +NL V + ++ ++L+ LFS G + SCK++RD S G GFV + ++A RA
Sbjct: 308 QGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGI-SRGSGFVAFSTPDEASRA 366
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
++E+NG + +K + V+ A+ + +RA L
Sbjct: 367 LLEMNGKMVVSKPLYVTLAQRKED--RRARL 395
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D S G+GFV++ E A++AI+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDNHG--SRGFGFVHFETHEAAQQAIVT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ ++NG G
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ N + +F + D L
Sbjct: 262 YV---------GRAQKRVERQN----------------------ELKRRFEQMKQDRLTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRREFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIRGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDNHG-----------------SRGFGFVHFETHEAAQQAIVTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVTDMNGKEVRGRLLYV 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD + S G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDS-GHSRGFGFVNFEKHEEAQKAVT 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRREFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + +R G PL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTVRALGGPL 396
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FSS G + SCK+ D +S GYGFV + + E A+ AI +
Sbjct: 147 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 205
Query: 88 LNGLKLQNKSIKVSY-------ARPSSEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ L +K + V + AR S A+ N+YV LPK +T ++L+ F YG I
Sbjct: 206 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 265
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ S N RSF GFV F A A++++NG +
Sbjct: 266 SSAVVMKDQ--SGNSRSF--------------GFVNFVSPEAAAVAVEKMNGI--SLGED 307
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R + L R F +RF
Sbjct: 308 VLYVGRAQKKSDREEEL----------RRKFEQ---------ERISRF------------ 336
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ L GS +++ NL D L ++F +G V + KV+ + Q +GFGFV
Sbjct: 337 -----EKLQGSN--LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGL-SRGFGFVA 388
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+N +EA+ A++ +NG +G + L V+ K
Sbjct: 389 YSNPEEALLAMKEMNGKMIGRKPLYVALAQRK 420
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ + L LF+ V V + ++ RD T +SLGY +VN+ EDA RA+
Sbjct: 58 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAM 116
Query: 86 IELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++++ I++ S PS+ + N+++ L + + L F +GTI++ +
Sbjct: 117 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 176
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D + SKG GFV+F + A+ A+ +LNG +
Sbjct: 177 VAMDVVGR----------------SKGYGFVQFEKEETAQAAIDKLNGML 210
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 35/185 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P+ +T +EL+ F G++ S +++D++ S +GFVN+ E A A+
Sbjct: 239 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAVAVE 297
Query: 87 ELNGLKLQNKSIKVSYARPSS------------------EAIKRANLYVSGLPKHMTQED 128
++NG+ L + V A+ S E ++ +NLY+ L + E
Sbjct: 298 KMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEK 357
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG + + +++ + +S+G GFV ++ EA AM+E
Sbjct: 358 LKEMFSEYGNVTSCKVMMNSQG----------------LSRGFGFVAYSNPEEALLAMKE 401
Query: 189 LNGTI 193
+NG +
Sbjct: 402 MNGKM 406
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q SNL + + ++ E+L+ +FS G V SCK++ + + S G+GFV Y E+A A
Sbjct: 340 QGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLA 398
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 399 MKEMNGKMIGRKPLYVALAQRKEE 422
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
P L G G +F+ NL ++ L++ F FG + + KV D + KG+GFV
Sbjct: 138 PSTRLSGKG-NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEK 195
Query: 323 YDEAVFAIQSLNGYALGDR 341
+ A AI LNG L D+
Sbjct: 196 EETAQAAIDKLNGMLLNDK 214
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 142/335 (42%), Gaps = 71/335 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ D+ S GYGFV++ E A +I +
Sbjct: 91 NVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEK-GNSKGYGFVHFETEEAANTSIEK 149
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E K N+YV + E L++ F PYG I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEEFDDEKLKDFFEPYGKI 209
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ ++ M+ E+ + SKG GFV F AE A+Q LNG + EG S
Sbjct: 210 TSYKV----MSKEDGK------------SKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A A R + L + KF L
Sbjct: 254 --LYVARAQKKAERQQEL-----------------------------KRKFEELK----- 277
Query: 259 NSMLPPKSLHGS--GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFG 316
K H S G ++V NL +D L + F +G + + KV+ D + + KGFG
Sbjct: 278 ------KKRHESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEEG-RSKGFG 330
Query: 317 FVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FVC + +EA A+ LNG +G + L V+ K
Sbjct: 331 FVCFISPNEATCAVTELNGRVVGSKPLYVALAQRK 365
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 69/316 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q + + L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++NK I++ +++ PS N+++ L + + + + + F +G I++ ++
Sbjct: 62 TMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A +++++NG +
Sbjct: 122 ALDEKGN----------------SKGYGFVHFETEEAANTSIEKVNGML----------- 154
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + G + R K A L N
Sbjct: 155 ---------------LNGKKV----------YVGKFIPRKEREKELGEKAKLFTN----- 184
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V N E +D L F P+G + + KV+ + K KGFGFV +
Sbjct: 185 ---------VYVKNFTEEFDDEKLKDFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTE 234
Query: 325 EAVFAIQSLNGYALGD 340
A A+Q+LNG +G+
Sbjct: 235 AAEAAVQALNGKDMGE 250
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 38/221 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + E+L+ F G++ S K++ K +S G+GFV + TE AE A+
Sbjct: 183 TNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG + + KS+ V+ A+ +E +KR NLYV L + E
Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDE 301
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F YGTI +++++ D+ SKG GFV F EA A+
Sbjct: 302 RLRKEFSLYGTITSAKVMTDEEGR----------------SKGFGFVCFISPNEATCAVT 345
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
ELNG + S+P+ V A R LA+ MR
Sbjct: 346 ELNGRVV--GSKPLYVALAQRKEERKAHLASQYMRHMTGMR 384
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 69/328 (21%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+T S +T + +++L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 32 DTATSDAATTPNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 91
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ + ++ +++ P+ + N+++ L +
Sbjct: 92 GYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 151
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D+ + SKG GFV + A +A+
Sbjct: 152 KALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAANNAI 195
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H H S
Sbjct: 196 KHVNGML--------------------------LNDKKVFVGH------HISKKDRQS-- 221
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + A+ N ++V N+ PE D +LFG +G + + + RD
Sbjct: 222 -KFEEMKANFTN---------------VYVKNIDPEVTDEEFRELFGKYGDITSATISRD 265
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+ K +GFGFV ++ A A+ LN
Sbjct: 266 -DSGKSRGFGFVNYVDHQNAQSAVDELN 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 53/247 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T EE + LF G++ S + RD + +S G+GFVNY ++A+ A+
Sbjct: 231 TNVYVKNIDPEVTDEEFRELFGKYGDITSATISRDDS-GKSRGFGFVNYVDHQNAQSAVD 289
Query: 87 ELNGLKLQNKSIKVSYARPS---SEAIKR---------------ANLYVSGLPKHMTQED 128
ELN ++ + V A+ E ++R NLYV L + +
Sbjct: 290 ELNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDDK 349
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQI--------------------- 167
L LF P+GTI +++++ D + + G +
Sbjct: 350 LRELFSPFGTITSAKVMRDTVGVSSDSDKEEGKEASEKEGEEASEKEETKVKAEDEEKTE 409
Query: 168 -----------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
SKG GFV F+ EA A+ E+N + G +P+ V A R L
Sbjct: 410 TKKPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRKSQL 467
Query: 217 AANLNAQ 223
A++ A+
Sbjct: 468 EASIQAR 474
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 140 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 198
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 199 NGMLLNDKKVFVGHHISK 216
>gi|326426729|gb|EGD72299.1| napor protein short isoform [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 144/351 (41%), Gaps = 36/351 (10%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
+E L V +P++ +E+L L G + ++++K T +S G FV + + A
Sbjct: 19 DEDAIKLFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSAL 78
Query: 83 RAIIELN---GLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
AI +L+ L ++V A R L+V + K T+ DLE +FRP+G I
Sbjct: 79 SAIADLHEKRTLPTMANPMQVKIADSEQRGDDR-KLFVGMISKTCTEADLEAMFRPFGEI 137
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL-NGTIPEGAS 198
+ +L PE SKG FV++ A A+ +L N T EG
Sbjct: 138 ESVNVLIG--------------PE--GQSKGCAFVKYTNAGSANQAIAKLHNSTTMEGCR 181
Query: 199 EPITVKFANSPAGRAKALA---------------ANLNAQAAAMRHFAAAMRHFGNPLHH 243
P+ VK A++ + + A AQ A + + +
Sbjct: 182 APMVVKIADTEKQKQQRRMQRQMPPMGMYGFPPNAMFGAQDMAQAMYGVQQFNVDAEWYP 241
Query: 244 SARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKV 303
A F P + P+ +F+Y+L E D+ L F FG V + KV
Sbjct: 242 GAGFGQQPYAQAPYGGAARAPQKEGPPNSNLFIYHLPQELNDHSLAATFMSFGNVISSKV 301
Query: 304 VRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPLP 354
D T + K FGFV N A AIQ++NG+ +G + L+V K K P
Sbjct: 302 FVDKYTGQSKCFGFVSYDNPQSAQAAIQAMNGFQIGGKRLKVQLKRPKNAP 352
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDS----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 AIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 243 DANKAVEEMNGKEMSGKAIFV 263
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRREFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L + A MR A+
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAS 395
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FSS G + SCK+ D +S GYGFV + + E A+ AI +
Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 191
Query: 88 LNGLKLQNKSIKVSY-------ARPSSEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ L +K + V + AR S A+ N+YV LPK +T ++L+ F YG I
Sbjct: 192 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 251
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ S N RSF GFV F A A++++NG +
Sbjct: 252 SSAVVMKDQ--SGNSRSF--------------GFVNFVSPEAAAVAVEKMNGI--SLGED 293
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R + L R F +RF
Sbjct: 294 VLYVGRAQKKSDREEEL----------RRKFEQ---------ERISRF------------ 322
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ L GS +++ NL D L ++F +G V + KV+ + Q +GFGFV
Sbjct: 323 -----EKLQGSN--LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGL-SRGFGFVA 374
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+N +EA+ A++ +NG +G + L V+ K
Sbjct: 375 YSNPEEALLAMKEMNGKMIGRKPLYVALAQRK 406
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ + L LF+ V V + ++ RD T +SLGY +VN+ EDA RA+
Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAM 102
Query: 86 IELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++++ I++ S PS+ + N+++ L + + L F +GTI++ +
Sbjct: 103 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 162
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D + SKG GFV+F + A+ A+ +LNG +
Sbjct: 163 VAMDVVGR----------------SKGYGFVQFEKEETAQAAIDKLNGML 196
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 35/185 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P+ +T +EL+ F G++ S +++D++ S +GFVN+ E A A+
Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAVAVE 283
Query: 87 ELNGLKLQNKSIKVSYARPSS------------------EAIKRANLYVSGLPKHMTQED 128
++NG+ L + V A+ S E ++ +NLY+ L + E
Sbjct: 284 KMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEK 343
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG + + +++ + +S+G GFV ++ EA AM+E
Sbjct: 344 LKEMFSEYGNVTSCKVMMNSQG----------------LSRGFGFVAYSNPEEALLAMKE 387
Query: 189 LNGTI 193
+NG +
Sbjct: 388 MNGKM 392
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q SNL + + ++ E+L+ +FS G V SCK++ + + S G+GFV Y E+A A
Sbjct: 326 QGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLA 384
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 385 MKEMNGKMIGRKPLYVALAQRKEE 408
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
P L G G +F+ NL ++ L++ F FG + + KV D + KG+GFV
Sbjct: 124 PSTRLSGKG-NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEK 181
Query: 323 YDEAVFAIQSLNGYALGDR 341
+ A AI LNG L D+
Sbjct: 182 EETAQAAIDKLNGMLLNDK 200
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 134/312 (42%), Gaps = 68/312 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 61 SASLYVGELDSSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKAL 120
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 121 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 180
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 181 VAQDETGA----------------SKGYGFVHYETDEAASQAIKHVNGML---------- 214
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 215 ----------------LNEKKVFVGH------HIPKKDRQS---KFEEMKANFTN----- 244
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ E D +LF FG V + + RD + K +GFGFV N+
Sbjct: 245 ----------IYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINH 294
Query: 324 DEAVFAIQSLNG 335
+ A A+ LNG
Sbjct: 295 EHAAKAVDELNG 306
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 151/375 (40%), Gaps = 106/375 (28%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+T A S GYGFV+Y E A +AI
Sbjct: 150 GNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDETGA-SKGYGFVHYETDEAASQAIK 208
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + N+YV +P T E+ LF +G
Sbjct: 209 HVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATDEEFRELFEKFGD 268
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ ++ + D +++ S+G GFV F H A A+ ELNG
Sbjct: 269 VTSASLARDTDSNK---------------SRGFGFVNFINHEHAAKAVDELNGK------ 307
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K + GRA+ + + +R A R + +++++
Sbjct: 308 ---DFKGQDLYVGRAQ----KKHEREEELRKSYEAAR-----IEKASKYQ---------- 345
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD------------ 306
G ++V NL + +D+ L +LF PFG++ + KV+RD
Sbjct: 346 ------------GVNLYVKNLDDDVDDDKLRELFTPFGSITSAKVMRDTPAETAEAEEKE 393
Query: 307 -------------------------PQTY-----KCKGFGFVCMTNYDEAVFAIQSLNGY 336
P++ K KGFGFVC N +EA A+ +N
Sbjct: 394 KKDSEKNKENIKEGETAEAENTEDKPKSEKRTVGKSKGFGFVCFNNPEEASKAVTDMNQR 453
Query: 337 ALGDRLLQVSFKTHK 351
+ ++ L V+ K
Sbjct: 454 MVNNKPLYVALAQRK 468
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 47/242 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P T EE + LF G+V S L RD + +S G+GFVN+ E A +A+
Sbjct: 243 TNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKAVD 302
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEA--IKRA------NLYVSGLPKHMTQED 128
ELNG + + + V A R S EA I++A NLYV L + +
Sbjct: 303 ELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDDDK 362
Query: 129 LENLFRPYGTIITSRILCD---------------------------KMASENVRSFVSGT 161
L LF P+G+I +++++ D +EN
Sbjct: 363 LRELFTPFGSITSAKVMRDTPAETAEAEEKEKKDSEKNKENIKEGETAEAENTEDKPKSE 422
Query: 162 PEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLN 221
SKG GFV FN EA A+ ++N + ++P+ V A R L A++
Sbjct: 423 KRTVGKSKGFGFVCFNNPEEASKAVTDMNQRMVN--NKPLYVALAQRKDVRKNQLEASIQ 480
Query: 222 AQ 223
A+
Sbjct: 481 AR 482
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FSS G + SCK+ D +S GYGFV + + E A+ AI +
Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 191
Query: 88 LNGLKLQNKSIKVSY-------ARPSSEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ L +K + V + AR S A+ N+YV LPK +T ++L+ F YG I
Sbjct: 192 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 251
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ S N RSF GFV F A A++++NG +
Sbjct: 252 SSAVVMKDQ--SGNSRSF--------------GFVNFVSPEAAAVAVEKMNGI--SLGED 293
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R + L R F +RF
Sbjct: 294 VLYVGRAQKKSDREEEL----------RRKFEQ---------ERISRF------------ 322
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ L GS +++ NL D L ++F +G V + KV+ + Q +GFGFV
Sbjct: 323 -----EKLQGSN--LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGL-SRGFGFVA 374
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+N +EA+ A++ +NG +G + L V+ K
Sbjct: 375 YSNPEEALLAMKEMNGKMIGRKPLYVALAQRK 406
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ + L LF+ V V + ++ RD T +SLGY +VN+ EDA RA+
Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAM 102
Query: 86 IELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++++ I++ S PS+ + N+++ L + + L F +GTI++ +
Sbjct: 103 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 162
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D + SKG GFV+F + A+ A+ +LNG +
Sbjct: 163 VAMDVVGR----------------SKGYGFVQFEKEETAQAAIDKLNGML 196
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 35/185 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P+ +T +EL+ F G++ S +++D++ S +GFVN+ E A A+
Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAVAVE 283
Query: 87 ELNGLKLQNKSIKVSYARPSS------------------EAIKRANLYVSGLPKHMTQED 128
++NG+ L + V A+ S E ++ +NLY+ L + E
Sbjct: 284 KMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEK 343
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG + + +++ + +S+G GFV ++ EA AM+E
Sbjct: 344 LKEMFSEYGNVTSCKVMMNSQG----------------LSRGFGFVAYSNPEEALLAMKE 387
Query: 189 LNGTI 193
+NG +
Sbjct: 388 MNGKM 392
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q SNL + + ++ E+L+ +FS G V SCK++ + + S G+GFV Y E+A A
Sbjct: 326 QGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLA 384
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 385 MKEMNGKMIGRKPLYVALAQRKEE 408
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
P L G G +F+ NL ++ L++ F FG + + KV D + KG+GFV
Sbjct: 124 PSTRLSGKG-NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEK 181
Query: 323 YDEAVFAIQSLNGYALGDR 341
+ A AI LNG L D+
Sbjct: 182 EETAQAAIDKLNGMLLNDK 200
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 68/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS+ G + SCK+ +D++ S GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQDES-GTSKGYGFVHFETEEAANKSIDK 158
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V P E A + N+YV + + + L +F YG I
Sbjct: 159 VNGMLLNGKRVFVGKFIPRKEREKELGEKAKRFTNVYVKNFGEDFSDDLLREMFEKYGRI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ +++ SKG GFV F AE A+ LNG I EG
Sbjct: 219 TSHKVMSKDDGK----------------SKGFGFVAFEDPEAAEKAVASLNGKEIVEG-- 260
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+P+ V A A R + L + KF L + L+
Sbjct: 261 KPLFVGRAQKKAERQQEL-----------------------------KRKFEQLKMERLS 291
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V N+ +D L + F PFG + + KV+ + + KGFGFV
Sbjct: 292 RY---------QGVNLYVKNIDDNIDDERLRKEFTPFGTITSAKVMLE--DGRSKGFGFV 340
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG +G + L V+ K
Sbjct: 341 CFSSAEEATKAVTEMNGRIVGSKPLYVALAQRK 373
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ K I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 71 TMNYDPLKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
D+ SGT SKG GFV F A ++ ++NG + G
Sbjct: 131 AQDE----------SGT------SKGYGFVHFETEEAANKSIDKVNGMLLNG 166
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 44/234 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + + L+ +F G + S K++ K +S G+GFV + E AE+A+
Sbjct: 192 TNVYVKNFGEDFSDDLLREMFEKYGRITSHKVM-SKDDGKSKGFGFVAFEDPEAAEKAVA 250
Query: 87 ELNGLKL-QNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQE 127
LNG ++ + K + V A+ +E +KR NLYV + ++ E
Sbjct: 251 SLNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERLSRYQGVNLYVKNIDDNIDDE 310
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L F P+GTI +++++ E+ R SKG GFV F+ EA A+
Sbjct: 311 RLRKEFTPFGTITSAKVML-----EDGR------------SKGFGFVCFSSAEEATKAVT 353
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
E+NG I S+P+ V A R LA+ + A +R M+ G P+
Sbjct: 354 EMNGRIV--GSKPLYVALAQRKEDRKAHLASQYMQKMANIR-----MQQIGQPV 400
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ F+ G + S K++ + +S G+GFV + E+A +A
Sbjct: 294 QGVNLYVKNIDDNIDDERLRKEFTPFGTITSAKVMLE--DGRSKGFGFVCFSSAEEATKA 351
Query: 85 IIELNGLKLQNKSIKVSYA-RPSSEAIKRANLYVSGLPKHMTQEDLENLFRP 135
+ E+NG + +K + V+ A R A+ Y+ + Q+ + +F+P
Sbjct: 352 VTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQKMANIRMQQIGQPVFQP 403
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 117 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 174
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 175 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 234
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 235 LSVKVMRDS----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 276
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 277 AIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 307
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 308 Y---------QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVC 356
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 357 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 388
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 88 TMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 147
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 148 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 179
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 180 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 209
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 210 ---------VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHE 259
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 260 DANKAVEEMNGKEMSGKAIFV 280
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 208 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAVE 266
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 267 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 326
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 327 LRREFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 369
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L + A MR A+
Sbjct: 370 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAS 412
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 141/332 (42%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +T+ + L F++ G++ SCK+ D+ A S GYGFV+Y E AE AI
Sbjct: 173 NIFIKNLDETIDNKALHDTFAAFGDILSCKVATDEHGA-SKGYGFVHYVTGESAEAAIKG 231
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG++L +K + V P + + NLY+ LP T E+L +F +G I
Sbjct: 232 VNGMQLNDKVVFVGIHVPRRDRQAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPI 291
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ + D+ +G GFV + H E AS+
Sbjct: 292 TSAAVQSDEHGKH----------------RGFGFVNYENH---------------ESASK 320
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ G +A AQ R A ++ H +++
Sbjct: 321 AVDALHDKDYKGNVLYVA---RAQKRTERD--AELKK----AHEQQKYE----------- 360
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+L G ++V NL E +D L F PFG + + KV++D + KGFGFVC
Sbjct: 361 -----TTLKYQGVNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKD-EKGTSKGFGFVC 414
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +NG LG + L VS K
Sbjct: 415 FSSPDEATKAVAEMNGKMLGSKPLYVSLAQRK 446
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S ++ N++L V + T+T+ L +FS +G V S ++ RD T +SLGY +VNY
Sbjct: 77 SPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAA 136
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
DAERA+ +LN ++NK+ ++ +++ PS + N+++ L + + + L + F +G
Sbjct: 137 DAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 196
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
I++ ++ D+ + SKG GFV + AE A++ +NG
Sbjct: 197 DILSCKVATDEHGA----------------SKGYGFVHYVTGESAEAAIKGVNG 234
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 38/232 (16%)
Query: 15 RSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
R +V Q +NL + +P T EEL +F G + S + D+ + G+GFVN
Sbjct: 253 RQAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEH-GKHRGFGFVN 311
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLY 116
Y E A +A+ L+ + + V+ A+ +E +K+A NLY
Sbjct: 312 YENHESASKAVDALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLY 371
Query: 117 VSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRF 176
V L E L+N F P+GTI + +++ D+ + SKG GFV F
Sbjct: 372 VKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGT----------------SKGFGFVCF 415
Query: 177 NQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+ EA A+ E+NG + S+P+ V A R + L A + +Q + MR
Sbjct: 416 SSPDEATKAVAEMNGKM--LGSKPLYVSLAQRKEVRKQQLEAQM-SQRSQMR 464
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F H A++A++ +NG +
Sbjct: 131 VCDDHG-----------------SRGFGFVHFETHEAAQNAIRTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 193 ---------IYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHS-RGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG + RLL V
Sbjct: 243 DAQKAVTDMNGKEVSGRLLYV 263
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D S G+GFV++ E A+ AI
Sbjct: 100 NVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQNAIRT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + + L++LF +G I
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLHVDVDERCLQDLFSQFGKI 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H +A+ A+ ++NG E +
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFEKHEDAQKAVTDMNGK--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D L
Sbjct: 260 LLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQDRLTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRKEFAPYGMITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + + LQ LFS G++ S K++RD + S G+GFVN+ + EDA++A+
Sbjct: 191 TNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDS-GHSRGFGFVNFEKHEDAQKAVT 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFAPYGMITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR G+PL
Sbjct: 353 MNGRI--VGTKPLYVALAQRKEER-KAILTNQYIQR------LSTMRALGSPL 396
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDS----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 AIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 243 DANKAVEEMNGKEMSGKAIFV 263
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L + A MR A+
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAS 395
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 218 LSVKVMRDS----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 260 AIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 71 TMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 131 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 163 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 243 DANKAVEEMNGKEMSGKAIFV 263
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 250 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 310 LRREFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L + A MR A+
Sbjct: 353 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAS 395
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 131/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
+ F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 QKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS+ G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A A+ +NG +
Sbjct: 131 VCDENG-----------------SRGFGFVHFETHEAANQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S + + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRQEREAELGARALEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V N + +D L +LF FG +VKV+ D + + +GFGFV ++
Sbjct: 192 --------NIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVD-ENGQSRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ ++NG LG R+L V
Sbjct: 243 EAQKAVSNMNGKELGGRVLYV 263
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A +AI
Sbjct: 100 NIFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDENG--SRGFGFVHFETHEAANQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV M E L+ LF +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQEREAELGARALEFTNIYVKNFEGDMDDECLQELFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ S+G GFV F +H EA+ A+ +NG E
Sbjct: 218 LSVKVMVDENGQ----------------SRGFGFVNFEKHEEAQKAVSNMNGK--ELGGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R L + +F + + +N
Sbjct: 260 VLYVGRAQKRSERQSEL-----------------------------KRRFEQMKQERVNR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDIIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V M E LQ LFS G+ S K++ D+ QS G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDEN-GQSRGFGFVNFEKHEEAQKAVS 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG +L + + V A+ SE +KR NLYV L + E
Sbjct: 250 NMNGKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVNRYQGVNLYVKNLDDIIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I +++P+ V A R L + + + +R
Sbjct: 353 MNGRIV--STKPLYVALAQRKEERKAILTSQYMQRLSTLR 390
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 131/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
+ F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 QKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FSS G + SCK++ D ++ G+GFV+Y E A+RAI +
Sbjct: 91 NVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCDINGSK--GFGFVHYESDESAQRAIEK 148
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ +++K + V+ + ++ ++ NL+V LP + L F +G +
Sbjct: 149 VNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLKNFEQFGEV 208
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++CD E +SK GF+ F +H +AE A++ ++ EG +
Sbjct: 209 VSHKVICD---------------ETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEG--K 251
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ A A R+ L A K+ + + +
Sbjct: 252 KLYCGRAQKKAERSSELKA-----------------------------KYEKIKQERIQR 282
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F FG + + KV+ D + KGFGFVC
Sbjct: 283 Y---------QGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNG-RSKGFGFVC 332
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG G + L V K
Sbjct: 333 FSSPEEATKAVTEMNGRIFGGKPLYVGLAQRK 364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 69/310 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L F + G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS + N+++ L + + + L + F +G I++ ++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD ++G SKG GFV + A+ A++++NG + E
Sbjct: 122 VCD----------ING-------SKGFGFVHYESDESAQRAIEKVNGMLMED-------- 156
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K A ++ MR F A +HF N
Sbjct: 157 --------KKVFVARFKSRNDRMREFGDAAKHFTN------------------------- 183
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+FV NL + + L + F FG V + KV+ D T K GF+ +D
Sbjct: 184 ---------LFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHD 234
Query: 325 EAVFAIQSLN 334
+A A++ ++
Sbjct: 235 QAEAAVEIMH 244
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D + +NL V +P + + L F GEV S K+I D+TT S +GF+++ +
Sbjct: 176 DAAKHFTNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQ 235
Query: 81 AERAI-----IELNGLKL----------QNKSIKVSYARPSSEAIKR---ANLYVSGLPK 122
AE A+ E+ G KL ++ +K Y + E I+R NLYV L
Sbjct: 236 AEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDD 295
Query: 123 HMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEA 182
+ E L F+ +G I +++++ D ++G SKG GFV F+ EA
Sbjct: 296 SIDDEGLREAFKQFGNITSAKVITD----------LNGR------SKGFGFVCFSSPEEA 339
Query: 183 EHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
A+ E+NG I G +P+ V A R L
Sbjct: 340 TKAVTEMNGRIFGG--KPLYVGLAQRKEDRKAHL 371
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 147/321 (45%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD T +SLGY +VN+ + DA++A+
Sbjct: 10 ASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ KSI++ +++ + K N+++ L + + + L F +G I++S++
Sbjct: 70 TMNFDMIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKILSSKV 129
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ D Q SKG FV F A+ A++E+NG + +K
Sbjct: 130 MSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKL---------LK 163
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
GR K N + A +R+ A+ F N
Sbjct: 164 DCKVFVGRFK----NRKDREAELRNKAS---EFTN------------------------- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++F +G +VKV+ DP + K KGFGFV N++
Sbjct: 192 ---------VYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDP-SGKSKGFGFVSFDNHE 241
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
A A++ +NG + +L+ V
Sbjct: 242 AAQKAVEEMNGKDINGQLIFV 262
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 68/328 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G++ S K++ D ++ GY FV++ A+RAI E
Sbjct: 99 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAADRAIEE 156
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L++ K+ K A ++A + N+Y+ M E L +F YG
Sbjct: 157 MNGKLLKDCKVFVGRFKNRKDREAELRNKASEFTNVYIKNFGDDMDDERLREVFSKYGKT 216
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F+ H A+ A++E+NG G +
Sbjct: 217 LSVKVMTDP----------SGK------SKGFGFVSFDNHEAAQKAVEEMNGKDING--Q 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA + F R
Sbjct: 259 LIFV-------GRAQK---KVERQAELKQMFEQQKRE----------------------- 285
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ G +++ NL +D L + F FG++ VKV+++ + KGFG +C
Sbjct: 286 -----RIRKCQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEEG--QSKGFGLIC 338
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSF 347
++ +EA A+ +NG LG + L ++
Sbjct: 339 FSSPEEATKAMTEMNGQILGSKPLNIAL 366
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D + +S G+GFV++ E A++A+
Sbjct: 190 TNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTD-PSGKSKGFGFVSFDNHEAAQKAVE 248
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
E+NG + + I V A+ E ++A L + Q+ E + + G + + L
Sbjct: 249 EMNGKDINGQLIFVGRAQKKVE--RQAE-----LKQMFEQQKRERIRKCQGVKLYIKNLD 301
Query: 147 DKMASENVRSFVSGTPEIPQI--------SKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
D + E +R S I ++ SKG G + F+ EA AM E+NG I S
Sbjct: 302 DTIDDEKLRKEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEEATKAMTEMNGQIL--GS 359
Query: 199 EPITV 203
+P+ +
Sbjct: 360 KPLNI 364
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 250 APLTADLLNNSMLPPKS-----------LHGSGWC-IFVYNLAPETEDNVLWQLFGPFGA 297
A D +N M+ KS L SG +F+ NL ++ L++ F FG
Sbjct: 64 AQKALDTMNFDMIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGK 123
Query: 298 VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD-RLLQVSFKTHKP 352
+ + KV+ D Q KG+ FV N A AI+ +NG L D ++ FK K
Sbjct: 124 ILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKD 177
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L+ FSS G + K+++++ QS G+G + + E+A +A
Sbjct: 291 QGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEEATKA 348
Query: 85 IIELNGLKLQNKSIKVSYARP 105
+ E+NG L +K + ++ ++
Sbjct: 349 MTEMNGQILGSKPLNIALSQK 369
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 70/327 (21%)
Query: 11 TQSHRSTYQSDVNEQNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
T ST S N+ +S +L V + ++T+ L LFSS+G+V S ++ RD T +SLG
Sbjct: 35 TAVENSTPASAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 94
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQE 127
Y +VNY T D ERA+ +LN ++ K ++ +++ P+ + N+++ L + +
Sbjct: 95 YAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNK 154
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L + F +G I++ ++ D+ + SKG GFV + A +A++
Sbjct: 155 ALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAANNAIK 198
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
+NG + LN + + H H S
Sbjct: 199 HVNGML--------------------------LNDKKVFVGH------HISKKDRQS--- 223
Query: 248 KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP 307
KF + A+ N +++ NL E +D+ ++F FG + + + RD
Sbjct: 224 KFEEMKANFTN---------------VYIKNLDSEIDDDEFRKMFEKFGEITSATLSRD- 267
Query: 308 QTYKCKGFGFVCMTNYDEAVFAIQSLN 334
Q K +GFGFV + ++ A A++ +N
Sbjct: 268 QEGKSRGFGFVNFSTHESAQAAVEEMN 294
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + +E + +F GE+ S L RD+ +S G+GFVN+ E A+ A+
Sbjct: 233 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVE 291
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------IKRA------NLYVSGLPKHMTQED 128
E+N +++++ + V A+ E +++A NLYV L + E
Sbjct: 292 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 351
Query: 129 LENLFRPYGTIITSRILCD 147
L LF PYGTI +++++ D
Sbjct: 352 LRELFGPYGTITSAKVMRD 370
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 142 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 200
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 201 NGMLLNDKKVFVGHHISK 218
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 117 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 174
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 175 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 234
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 235 LSVKVMRDS----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 276
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 277 AIFV-------GRAQK---KVERQAELKR-------------------KFEQLKQERISR 307
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 308 Y---------QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVC 356
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 357 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 388
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS N+++ L K + + L + F +G I++ ++
Sbjct: 88 TMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 147
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG FV F A+ A++++NG +
Sbjct: 148 VCDENG-----------------SKGYAFVHFETQEAADKAIEKMNGML----------- 179
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 180 -----LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------- 209
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D L +LF FG +VKV+RD + K KGFGFV ++
Sbjct: 210 ---------VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHE 259
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + + + V
Sbjct: 260 DANKAVEEMNGKEMSGKAIFV 280
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 208 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAVE 266
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 267 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 326
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 327 LRREFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 369
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L + A MR A+
Sbjct: 370 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAS 412
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIEK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL + +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 131/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T S Y +VN+ +DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIEKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 142/332 (42%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + L F++ G V SCK+ D+ +S GYGFV+Y E AE AI
Sbjct: 141 NIFIKNLDDAIDNKALHDTFAAFGNVLSCKVATDEM-GRSKGYGFVHYETNEAAESAIKA 199
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + A+ + + N+YV + ++ LF P+G +
Sbjct: 200 VNGMLLNDKKVYVGHHVSKKDRQAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNV 259
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ + D+ S+G GFV F H EA+ A+ L+ + +G
Sbjct: 260 TSAVLQRDEEGR----------------SRGFGFVNFETHEEAQKAVDTLHDSDFKGRK- 302
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R + L R + A + ++++
Sbjct: 303 -LFVSRAQKKSEREEEL----------RRSYEQAK------MEKMSKYQ----------- 334
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL + +D L F PFGA+ + KV+R + KGFGFVC
Sbjct: 335 -----------GVNLYIKNLEDDVDDEKLRDAFEPFGAITSAKVMRT-EGGTSKGFGFVC 382
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +N +G + L VS +
Sbjct: 383 FSSPDEATKAVAEMNNKMMGSKPLYVSLAQRR 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q+ V +++L V + T+++ L +F+ +G V S ++ RD T +SLGY +VNY+
Sbjct: 44 QNHVPAPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNA 103
Query: 79 EDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPY 136
D ERA+ +LN ++ ++ ++ +++ P+ + N+++ L + + L + F +
Sbjct: 104 ADGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDDAIDNKALHDTFAAF 163
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
G +++ ++ D+M SKG GFV + + AE A++ +NG +
Sbjct: 164 GNVLSCKVATDEMGR----------------SKGYGFVHYETNEAAESAIKAVNGML 204
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 41/254 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQN---SNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +++Y + Q+ ++EQ +N+ V + +E + LF+ G V S
Sbjct: 204 LLNDKKVYVGHHVSKKDRQAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAV 263
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS---EAIKRA- 113
L RD+ +S G+GFVN+ E+A++A+ L+ + + + VS A+ S E ++R+
Sbjct: 264 LQRDEE-GRSRGFGFVNFETHEEAQKAVDTLHDSDFKGRKLFVSRAQKKSEREEELRRSY 322
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NLY+ L + E L + F P+G I +++++ +
Sbjct: 323 EQAKMEKMSKYQGVNLYIKNLEDDVDDEKLRDAFEPFGAITSAKVMRTE----------G 372
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
GT SKG GFV F+ EA A+ E+N + S+P+ V A R + L +
Sbjct: 373 GT------SKGFGFVCFSSPDEATKAVAEMNNKM--MGSKPLYVSLAQRREVRRQQLESQ 424
Query: 220 LNAQAAAMRHFAAA 233
+ AQ +R AA
Sbjct: 425 I-AQRNQIRMQQAA 437
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FSS G + SCK++ D ++ G+GFV+Y E A+RAI +
Sbjct: 91 NVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCDINGSK--GFGFVHYESDESAQRAIEK 148
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ +++K + V+ + ++ ++ NL+V LP + L F +G +
Sbjct: 149 VNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLENFEQFGEV 208
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++CD E +SK GF+ F +H +AE A++ ++ EG +
Sbjct: 209 VSHKVICD---------------ETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEG--K 251
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ A A R+ L A K+ + + +
Sbjct: 252 KLYCGRAQKKAERSSELKA-----------------------------KYEKIKQERIQR 282
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F FG + + KV+ D + KGFGFVC
Sbjct: 283 Y---------QGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNG-RSKGFGFVC 332
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG G + L V K
Sbjct: 333 FSSPEEATKAVTEMNGRIFGGKPLYVGLAQRK 364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 69/310 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L F + G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K I++ +++ PS + N+++ L + + + L + F +G I++ ++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKV 121
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD ++G SKG GFV + A+ A++++NG + E
Sbjct: 122 VCD----------ING-------SKGFGFVHYESDESAQRAIEKVNGMLMED-------- 156
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K A ++ MR F A +HF N
Sbjct: 157 --------KKVFVARFKSRNDRMREFGDAAKHFTN------------------------- 183
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+FV NL + + L + F FG V + KV+ D T K GF+ +D
Sbjct: 184 ---------LFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHD 234
Query: 325 EAVFAIQSLN 334
+A A++ ++
Sbjct: 235 QAEAAVEIMH 244
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D + +NL V +P + + L F GEV S K+I D+TT S +GF+++ +
Sbjct: 176 DAAKHFTNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQ 235
Query: 81 AERAI-----IELNGLKL----------QNKSIKVSYARPSSEAIKR---ANLYVSGLPK 122
AE A+ E+ G KL ++ +K Y + E I+R NLYV L
Sbjct: 236 AEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDD 295
Query: 123 HMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEA 182
+ E L F+ +G I +++++ D ++G SKG GFV F+ EA
Sbjct: 296 SIDDEGLREAFKQFGNITSAKVITD----------LNGR------SKGFGFVCFSSPEEA 339
Query: 183 EHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
A+ E+NG I G +P+ V A R L
Sbjct: 340 TKAVTEMNGRIFGG--KPLYVGLAQRKEDRKAHL 371
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 70/314 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 56 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTSDGEK 115
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 116 ALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 175
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A+ A++ +NG +
Sbjct: 176 CKVAQDEHGN----------------SKGYGFVHYETDEAAQQAIKHVNGML-------- 211
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + H H S KF + A+ N
Sbjct: 212 ------------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN--- 241
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
I+V N+ PE D+ +LF +G + + + RD Q K +GFGFV T
Sbjct: 242 ------------IYVKNVNPEASDDEFRELFERYGEITSSSLARD-QDGKSRGFGFVNYT 288
Query: 322 NYDEAVFAIQSLNG 335
++ A A+ LNG
Sbjct: 289 THESAYKAVDELNG 302
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V + +E + LF GE+ S L RD+ +S G+GFVNY E A +A+
Sbjct: 240 TNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQD-GKSRGFGFVNYTTHESAYKAVD 298
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIK--------RANLYVSGLPKHMTQED 128
ELNG + + + V A R S EA + NLY+ L + E
Sbjct: 299 ELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVDDEK 358
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQ---------------------- 166
L ++F +G I +++++ D + + P+
Sbjct: 359 LRHMFSEFGPITSAKVMRDAPSDGSDEEKEDEQEAEPKKEGNVVEADEEGSEKKGDKKFG 418
Query: 167 ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQ 223
SKG GFV F+ +A A+ E++ + G +P+ V A R L A++ A+
Sbjct: 419 KSKGFGFVCFSNPDDATKAVAEMSQRMING--KPLYVALAQRKDVRKSQLEASIQAR 473
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTSDGEKALEE 119
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 120 LNYTIIKGRPCRIMWSQRDP 139
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 135/322 (41%), Gaps = 56/322 (17%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T LQ +F S+G VE CKLIR + ++ +GF++YY A AI+ LNG +L +
Sbjct: 86 VTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAILSLNGRQLYGQP 141
Query: 98 IKVSYA---RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
IKV++A P + N++V L +T L F Y T +R++ D+
Sbjct: 142 IKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGR-- 199
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
S+G GFV F +A+ A+ +LNG N + +
Sbjct: 200 -------------SRGFGFVSFRNQQDAQSAINDLNGKW-----------LGNR---QIR 232
Query: 215 ALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
A A A + N S K P NN +
Sbjct: 233 CNWATKGANAGEEKQILDTKVDLSNGSSESG--KENPNDDGPENNPQFT---------TV 281
Query: 275 FVYNLAPETEDNVLWQLFGPFGA--VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+V NL E N + F GA ++ V+V RD KGFGFV + ++EA AIQ
Sbjct: 282 YVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRD------KGFGFVRYSTHEEAALAIQM 335
Query: 333 LNGYALGDRLLQVSFKTHKPLP 354
NG +G R ++ S+ + KP P
Sbjct: 336 GNGQLIGGRQIKCSWGS-KPTP 356
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 80/204 (39%), Gaps = 56/204 (27%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +T L FS +++ D+ T +S G+GFV++ +DA+ AI +
Sbjct: 161 NIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 220
Query: 88 LNGLKLQNKSIKVSYA--------------------RPSSEAIKR-------------AN 114
LNG L N+ I+ ++A SSE+ K
Sbjct: 221 LNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTT 280
Query: 115 LYVSGLPKHMTQEDLENLFRPY--GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
+YV LP T D+ F G+I R+ D KG G
Sbjct: 281 VYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRD---------------------KGFG 319
Query: 173 FVRFNQHIEAEHAMQELNGTIPEG 196
FVR++ H EA A+Q NG + G
Sbjct: 320 FVRYSTHEEAALAIQMGNGQLIGG 343
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 240 PLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
P HH A + + + LPP + ++V N+ + D VL ++F G V+
Sbjct: 43 PGHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVE 102
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
K++R ++ FGF+ + A AI SLNG L + ++V++
Sbjct: 103 GCKLIRKEKS----SFGFIDYYDRRYAALAILSLNGRQLYGQPIKVNW 146
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 67/333 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + +++ + L FS+ G + SCK+ D+ S GYGFV++ E A +AI
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENG--SKGYGFVHFETEEAARQAIE 156
Query: 87 ELNGLKLQNKSIKVSYARPSSEAI-------KR-ANLYVSGLPKHMTQEDLENLFRPYGT 138
++NG+ L K + V P E I KR N+Y+ + + + LF P+G
Sbjct: 157 KVNGMLLNGKKVYVGKFIPRKERIALLGDKMKRFNNVYIKNFGDELDDDKIRELFDPFGK 216
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
II+++++ D++ S+G GFV + + AE A+ LNG
Sbjct: 217 IISAKVMTDEIGK----------------SRGFGFVSYEEPEAAEKAVDNLNGM------ 254
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
G K L A AQ A R A ++ KF + + +N
Sbjct: 255 ----------ELGGGKVLYAG-RAQKKAERQ--AELKD-----------KFEKIKMERIN 290
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F FG + + +V+ + + KGFGFV
Sbjct: 291 RY---------QGVNLYVKNLDDVVDDERLRKEFSQFGTITSARVMS--EGGRSKGFGFV 339
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C ++ +EA A+ +NG + + L V+ K
Sbjct: 340 CFSSPEEATKAVTEMNGRIIVSKPLYVALAQRK 372
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 132/315 (41%), Gaps = 70/315 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS+ G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K + + L + F +G I++ +I
Sbjct: 71 TMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKI 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ SKG GFV F A A++++NG + G
Sbjct: 131 ASDENG-----------------SKGYGFVHFETEEAARQAIEKVNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K + + M+ F N
Sbjct: 166 --------KKVYVGKFIPRKERIALLGDKMKRFNN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E +D+ + +LF PFG + + KV+ D + K +GFGFV +
Sbjct: 193 ---------VYIKNFGDELDDDKIRELFDPFGKIISAKVMTD-EIGKSRGFGFVSYEEPE 242
Query: 325 EAVFAIQSLNGYALG 339
A A+ +LNG LG
Sbjct: 243 AAEKAVDNLNGMELG 257
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 12 QSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
+ R D ++ +N+ + + ++++ LF G++ S K++ D+ +S G+G
Sbjct: 176 RKERIALLGDKMKRFNNVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEI-GKSRGFG 234
Query: 72 FVNYYRTEDAERAIIELNGLKL-----------QNKS-----IKVSYARPSSEAIKR--- 112
FV+Y E AE+A+ LNG++L Q K+ +K + + E I R
Sbjct: 235 FVSYEEPEAAEKAVDNLNGMELGGGKVLYAGRAQKKAERQAELKDKFEKIKMERINRYQG 294
Query: 113 ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
NLYV L + E L F +GTI ++R++ SE R SKG G
Sbjct: 295 VNLYVKNLDDVVDDERLRKEFSQFGTITSARVM-----SEGGR------------SKGFG 337
Query: 173 FVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH 229
FV F+ EA A+ E+NG I S+P+ V A R LA+ + MR
Sbjct: 338 FVCFSSPEEATKAVTEMNGRII--VSKPLYVALAQRKEDRRAHLASQYMQRMTTMRQ 392
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHFK------------SRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 142/331 (42%), Gaps = 49/331 (14%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L V + +T + L+ +F + G V S K+I DK A+ YGFV Y AERA+ L
Sbjct: 80 LYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKN-AKGFNYGFVEYDDPGAAERAMQTL 138
Query: 89 NGLKLQNKSIKVSYARPSSEAIKRA-----NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
NG ++ I+V++A SS+A K +++V L + E L+ F +GTI +R
Sbjct: 139 NGRRVHQSEIRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEAR 198
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D S+G GFV + + +AE A+ ++G S I
Sbjct: 199 VMWDMKTGR---------------SRGYGFVAYRERSDAEKALSAMDGEWL--GSRAIRC 241
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
+AN G+ + AQ HF P H + D++
Sbjct: 242 NWANQ-KGQPSISQQSQMAQMGMTPTTPFGHHHF--PTHGIQSY-------DMIVQQT-- 289
Query: 264 PKSLHGSGW--CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
P+ W ++V NL P T N L LF FG + + D +GF F+ M
Sbjct: 290 PQ------WQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQAD------RGFAFIKMD 337
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
++ A AI L+GY + R L+ S+ +P
Sbjct: 338 THENAAMAICQLSGYNVNGRPLKCSWGKDRP 368
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+ E D +L Q F FG + +V+ D +T + +G+GFV +A A+ ++
Sbjct: 170 IFVGDLSNEVNDELLQQAFTTFGTISEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAM 229
Query: 334 NGYALGDRLLQVSFKTHKPLPPV 356
+G LG R ++ ++ K P +
Sbjct: 230 DGEWLGSRAIRCNWANQKGQPSI 252
>gi|346323639|gb|EGX93237.1| polyadenylate-binding protein [Cordyceps militaris CM01]
Length = 736
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 137/313 (43%), Gaps = 70/313 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 52 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEK 111
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 112 ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 171
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ S SKG GFV + A+ A++ +NG +
Sbjct: 172 CKVAQDETGS----------------SKGYGFVHYETDEAAQQAIKHVNGML-------- 207
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + H H S KF + A+ N
Sbjct: 208 ------------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN--- 237
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+++ N+AP+ D+ LF G V + + RDP K +GFGFV T
Sbjct: 238 ------------VYIKNIAPDVTDDQFRVLFEAHGDVTSSSIARDPDG-KSRGFGFVNFT 284
Query: 322 NYDEAVFAIQSLN 334
++ A A++ LN
Sbjct: 285 THEAASAAVEELN 297
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +T ++ + LF + G+V S + RD +S G+GFVN+ E A A+
Sbjct: 236 TNVYIKNIAPDVTDDQFRVLFEAHGDVTSSSIARD-PDGKSRGFGFVNFTTHEAASAAVE 294
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEA--IKRA------NLYVSGLPKHMTQED 128
ELN + + V A R S EA I++A NLY+ L + E
Sbjct: 295 ELNNKDFHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDEK 354
Query: 129 LENLFRPYGTIITSRILCD 147
L +F +G I +++++ D
Sbjct: 355 LRTMFTEFGPITSAKVMRD 373
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 56 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 115
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 116 LNYTLIKGRPCRIMWSQRDP 135
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D +T KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ETGSSKGYGFVHYETDEAAQQAIKHV 203
Query: 334 NGYALGDRLLQV 345
NG L ++ + V
Sbjct: 204 NGMLLNEKKVYV 215
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 138/314 (43%), Gaps = 70/314 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 56 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEK 115
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 116 ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 175
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A A++ +NG +
Sbjct: 176 CKVAQDENGN----------------SKGYGFVHYETDEAAAQAIKHVNGML-------- 211
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + + H S KF + A+ N
Sbjct: 212 ------------------LNEKKVYVGY------HIPKKDRQS---KFEEMKANFTN--- 241
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N+AP+ D QLF FG V + + RD Q K +GFGFV T
Sbjct: 242 ------------VYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARD-QEGKTRGFGFVNFT 288
Query: 322 NYDEAVFAIQSLNG 335
++ A A++ LNG
Sbjct: 289 THEAAFKAVEELNG 302
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 144/374 (38%), Gaps = 106/374 (28%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A +AI
Sbjct: 147 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEN-GNSKGYGFVHYETDEAAAQAIK 205
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V Y P + + N+YV + +T ED LF +G
Sbjct: 206 HVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFGD 265
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ +S + D+ ++G GFV F H A A++ELNG G
Sbjct: 266 VTSSSLARDQEGK----------------TRGFGFVNFTTHEAAFKAVEELNGKDFRGQD 309
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ + + +R A R L + +++
Sbjct: 310 LYV---------GRAQ----KKHEREEELRKSYEAAR-----LEKANKYQ---------- 341
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD-PQT-------- 309
G +++ NL + +D L Q+F FG + + KV+RD PQ
Sbjct: 342 ------------GVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDVPQEGEEEAKDQ 389
Query: 310 --------------------------------YKCKGFGFVCMTNYDEAVFAIQSLNGYA 337
K KGFGFVC +N D+A A+ +N
Sbjct: 390 EKDKENQKEGEKEGESAEGAEKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRM 449
Query: 338 LGDRLLQVSFKTHK 351
+ ++ L V+ K
Sbjct: 450 INNKPLYVALAQRK 463
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 47/260 (18%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
Y+ + R + ++ +N+ V + +T E+ + LF G+V S L RD+ ++
Sbjct: 221 YHIPKKDRQSKFEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQE-GKT 279
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYA----------RPSSEAIK------ 111
G+GFVN+ E A +A+ ELNG + + + V A R S EA +
Sbjct: 280 RGFGFVNFTTHEAAFKAVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANK 339
Query: 112 --RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD---------KMASENVRSFVSG 160
NLY+ L + E L +F +G I +++++ D K ++ + G
Sbjct: 340 YQGVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDVPQEGEEEAKDQEKDKENQKEG 399
Query: 161 TPEIPQI-----------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
E SKG GFV F+ +A A+ E+N + ++P+ V
Sbjct: 400 EKEGESAEGAEKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMIN--NKPLYV 457
Query: 204 KFANSPAGRAKALAANLNAQ 223
A R L A++ A+
Sbjct: 458 ALAQRKDVRKSQLEASIQAR 477
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 120 LNYTLIKGRPCRIMWSQRDP 139
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 139/330 (42%), Gaps = 64/330 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK+ D + QS GYGFV Y E A+RAI +
Sbjct: 128 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVD-PSGQSKGYGFVQYDTDEAAQRAIDK 186
Query: 88 LNGLKLQNKSIKVS------YARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
LNG+ L +K + V PS E +K N+YV L + ++ E+L +F +G +
Sbjct: 187 LNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTS 246
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
I+ D SKG GFV F +A A+ LNG
Sbjct: 247 CVIMRDGEGK----------------SKGFGFVNFENSDDAARAVDALNGK--------- 281
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
T G+A+ + + + F +++ AD S
Sbjct: 282 TFDDKEWFVGKAQKKSER---ETELKQKFEQSLKE----------------AADKSQGSN 322
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
L K+L S D+ L + F PFG + + KV+RDP T +G GFV +
Sbjct: 323 LYVKNLDES------------VTDDKLREHFAPFGTITSCKVMRDP-TGVSRGSGFVAFS 369
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA AI +NG + + L V+ K
Sbjct: 370 TPEEASRAITEMNGKMIVTKPLYVALAQRK 399
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + T+T +L FS G+V S ++ RD TT +SLGYG+VNY +DA RA+
Sbjct: 39 TSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 98
Query: 87 ELNGLKLQNKSIKVSYA--RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
ELN + L ++I+V Y+ PS N+++ L K + + L F +G I++ ++
Sbjct: 99 ELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKV 158
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D SKG GFV+++ A+ A+ +LNG +
Sbjct: 159 AVDPSGQ----------------SKGYGFVQYDTDEAAQRAIDKLNGML 191
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 41/220 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++++ EEL +F G SC ++RD +S G+GFVN+ ++DA RA+
Sbjct: 218 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRD-GEGKSKGFGFVNFENSDDAARAVD 276
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRA-------NLYVSGLPKHMTQED 128
LNG +K V A+ SE ++K A NLYV L + +T +
Sbjct: 277 ALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDK 336
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI + +++ D +S+G GFV F+ EA A+ E
Sbjct: 337 LREHFAPFGTITSCKVMRDPTG----------------VSRGSGFVAFSTPEEASRAITE 380
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + ++P+ V A R + A L AQ + MR
Sbjct: 381 MNGKMI--VTKPLYVALAQ----RKEDRKARLQAQFSQMR 414
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q SNL V + +++T ++L+ F+ G + SCK++RD T S G GFV + E+A RA
Sbjct: 319 QGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPTGV-SRGSGFVAFSTPEEASRA 377
Query: 85 IIELNGLKLQNKSIKVSYAR 104
I E+NG + K + V+ A+
Sbjct: 378 ITEMNGKMIVTKPLYVALAQ 397
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 136/322 (42%), Gaps = 56/322 (17%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T LQ +F S+G VE CKLIR + ++ +GF++YY A AI+ LNG +L +
Sbjct: 86 VTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAILSLNGRQLYGQP 141
Query: 98 IKVSYA---RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
IKV++A P + N++V L +T L F Y T +R++ D+
Sbjct: 142 IKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGR-- 199
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
S+G GFV F +A+ A+ +LNG K+ + R
Sbjct: 200 -------------SRGFGFVSFRNQQDAQSAINDLNG------------KWLGNRQIRCN 234
Query: 215 ALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
A A A + N S K P NN +
Sbjct: 235 --WATKGANAGEEKQILDTKVDLSNGSSESG--KENPNEDGPENNPQFT---------TV 281
Query: 275 FVYNLAPETEDNVLWQLFGPFGA--VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+V NL E N + F GA ++ V+V RD KGFGFV + ++EA AIQ
Sbjct: 282 YVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRD------KGFGFVRYSTHEEAALAIQM 335
Query: 333 LNGYALGDRLLQVSFKTHKPLP 354
NG +G R ++ S+ + KP P
Sbjct: 336 GNGQLIGGRQIKCSWGS-KPTP 356
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 80/204 (39%), Gaps = 56/204 (27%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +T L FS +++ D+ T +S G+GFV++ +DA+ AI +
Sbjct: 161 NIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 220
Query: 88 LNGLKLQNKSIKVSYARP--------------------SSEAIKR-------------AN 114
LNG L N+ I+ ++A SSE+ K
Sbjct: 221 LNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNEDGPENNPQFTT 280
Query: 115 LYVSGLPKHMTQEDLENLFRPY--GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIG 172
+YV LP T D+ F G+I R+ D KG G
Sbjct: 281 VYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRD---------------------KGFG 319
Query: 173 FVRFNQHIEAEHAMQELNGTIPEG 196
FVR++ H EA A+Q NG + G
Sbjct: 320 FVRYSTHEEAALAIQMGNGQLIGG 343
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 240 PLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQ 299
P HH A + + + LPP + ++V N+ + D VL ++F G V+
Sbjct: 43 PGHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVE 102
Query: 300 NVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
K++R ++ FGF+ + A AI SLNG L + ++V++
Sbjct: 103 GCKLIRKEKS----SFGFIDYYDRRYAALAILSLNGRQLYGQPIKVNW 146
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 29 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 86
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 146
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV + +H +A A++E+NG E + +
Sbjct: 147 LSVKVMRDS----------SGK------SKGFGFVSYEKHEDANKAVEEMNGK--EMSGK 188
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 189 AIFV-------GRAQ---KKVERQAELKR-------------------KFEQLKQERISR 219
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 220 Y---------QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVC 268
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 269 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 300
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 120 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAVE 178
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 179 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 238
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F+ EA A+ E
Sbjct: 239 LRREFSPFGSITSAKVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 281
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L + A MR A+
Sbjct: 282 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAS 324
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 70/261 (26%)
Query: 93 LQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA 150
++ K I++ +++ PS N+++ L + + + L + F +G I++ +++CD+
Sbjct: 6 MKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDENG 65
Query: 151 SENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
S KG FV F A+ A++++NG +
Sbjct: 66 S-----------------KGYAFVHFETQEAADKAIEKMNGML----------------L 92
Query: 211 GRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGS 270
K ++ A + F N
Sbjct: 93 NDRKVFVGRFKSRKEREAELGAKAKEFTN------------------------------- 121
Query: 271 GWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAI 330
+++ N E +D L +LF FG +VKV+RD + K KGFGFV +++A A+
Sbjct: 122 ---VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEKHEDANKAV 177
Query: 331 QSLNGYALGDRLLQVSFKTHK 351
+ +NG + + + V K
Sbjct: 178 EEMNGKEMSGKAIFVGRAQKK 198
>gi|330843410|ref|XP_003293648.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
gi|325076001|gb|EGC29827.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
Length = 735
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 156/367 (42%), Gaps = 58/367 (15%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGE--VESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
Q ++L V + + + L LFS VG + S + RD T +SLGY +VN+Y DAE
Sbjct: 118 QLTSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNHDAE 177
Query: 83 RAIIELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
RA+ LN + K ++ SY P+ N++V L K + L ++F +G I+
Sbjct: 178 RALDTLNYSMIHGKPCRIMWSYRDPTKRKTNVGNVFVKNLEKAVDNAMLYDVFSSFGNIL 237
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA--- 197
+ ++ +K ISKG G+V F + A++ +NGT+ G
Sbjct: 238 SCKVEYEK-----------------GISKGYGYVHFETSESSGKAIERINGTLVLGKPIF 280
Query: 198 SEPITVK-----------FAN--------------SPAGRAKALAANLNAQAAAMRHFAA 232
EP K F N S G + +++ +
Sbjct: 281 CEPFVAKVERYKVENKVFFRNADESVTQEMIQEELSKFGEIEICTLKIDSTGKSKGLGTV 340
Query: 233 AMRHFGNPLH------HSARFKFAPLTADLLNNSMLPPKSLHG--SGWCIFVYNLAPETE 284
++ + S + P+T D + N + L + +F+ N+ E
Sbjct: 341 EFKNCEDAQKLLAVEADSIQINGKPITFDRVKNKIERVTELRKKTTDQTLFLSNIDESIE 400
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
+ + F GA+ K+V+D ++ K KG+GF+ + EA A+++LNG+ G++ +
Sbjct: 401 KETIKEEFSKHGAIIGCKIVQD-ESGKNKGYGFITFSEVSEANKALEALNGFTFGNKQIT 459
Query: 345 VSFKTHK 351
VS ++K
Sbjct: 460 VSLSSNK 466
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFG--AVQNVKVVRDPQTYKCKGFG 316
N PP ++V +LA + + VL +LF G A+ ++ V RD TY+ G+
Sbjct: 107 NPQFPPNYQPSQLTSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYA 166
Query: 317 FVCMTNYDEAVFAIQSLN 334
+V N +A A+ +LN
Sbjct: 167 YVNFYNNHDAERALDTLN 184
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 63/317 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ V + + + ++L FS G + SCK++ DK T S GYG+V+Y E A AI
Sbjct: 97 GNIFVKNLHEGIDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIE 156
Query: 87 ELNGLKLQNKSIKVSY-----ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+L+G+ + K ++V RP N+++ +P T++ L F +G +++
Sbjct: 157 KLDGMLIDGKEVQVGVFMRRDNRPGQ--ADWTNVFIKNIPFEWTEDKLREEFEGFGEVVS 214
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG---TIPEGAS 198
++ P+ Q S G GFV F H A A++E+N T+ E
Sbjct: 215 AK------------------PKEVQGSLGFGFVNFATHEAAAAAVKEMNDKEFTVTEDGE 256
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
E V F GRA Q A R ++ + A+F+
Sbjct: 257 EVTKVLFV----GRA---------QKKAERERELRAKYEAEKIDRIAKFQ---------- 293
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL D+VL F G + + +V++D +T +GFGFV
Sbjct: 294 ------------GVNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFV 341
Query: 319 CMTNYDEAVFAIQSLNG 335
C + ++A A+ +NG
Sbjct: 342 CYSTPEDATRAVNEMNG 358
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 17/187 (9%)
Query: 19 QSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRT 78
Q N +++L + + + + L +F++VG V S ++ RD T +SLGY +VNY++
Sbjct: 1 QQSANFSSASLYIGDLLPEVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQV 60
Query: 79 EDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPY 136
DAERA+ +N +++ K ++ +++ PS N++V L + + + L + F +
Sbjct: 61 ADAERALDSMNFTEIKGKPCRIMWSQRDPSMRRSGVGNIFVKNLHEGIDNKQLYDTFSLF 120
Query: 137 GTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
G I++ +++ DK +SKG G+V + + A A+++L+G + +G
Sbjct: 121 GNILSCKVVTDKATG---------------LSKGYGYVHYETNEAAASAIEKLDGMLIDG 165
Query: 197 ASEPITV 203
+ V
Sbjct: 166 KEVQVGV 172
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYR--------- 77
+N+ + +P T+++L+ F GEV S K K SLG+GFVN+
Sbjct: 186 TNVFIKNIPFEWTEDKLREEFEGFGEVVSAK---PKEVQGSLGFGFVNFATHEAAAAAVK 242
Query: 78 ---------TEDAERAIIELNGLKLQNKSIKVSYARPSSEAIK--------RANLYVSGL 120
TED E L + Q K+ + R EA K NLYV L
Sbjct: 243 EMNDKEFTVTEDGEEVTKVLFVGRAQKKAERERELRAKYEAEKIDRIAKFQGVNLYVKNL 302
Query: 121 PKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHI 180
+T + L + F GTI ++R++ D IS+G GFV ++
Sbjct: 303 DDTVTDDVLRDEFSAMGTITSARVMKDLKTG---------------ISRGFGFVCYSTPE 347
Query: 181 EAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLN 221
+A A+ E+NG I G +PI V A R L A N
Sbjct: 348 DATRAVNEMNGKIILG--KPIFVALAQRRDVRRAQLEAQHN 386
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + T+T + L+ FS++G + S ++++D T S G+GFV Y EDA RA
Sbjct: 293 QGVNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRA 352
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + K I V+ A+ ++RA L
Sbjct: 353 VNEMNGKIILGKPIFVALAQ--RRDVRRAQL 381
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV NL ++ L+ F FG + + KVV D T KG+G+V + A AI+ L
Sbjct: 99 IFVKNLHEGIDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEKL 158
Query: 334 NGYALGDRLLQVS 346
+G + + +QV
Sbjct: 159 DGMLIDGKEVQVG 171
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETYEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D +S R F GFV F +H EA+ A+ +NG G
Sbjct: 218 LSVKVMRD--SSGRSRCF--------------GFVNFEKHEEAQKAVVHMNGKEVSG--- 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ L A+ AQ R + + +F + D L+
Sbjct: 259 --------------RLLYAS-RAQKRVER-------------QNELKRRFEQMKQDRLSR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDGKLRKEFSPYGVITSAKVMTE--GSHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 70/322 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F + A+ A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETYEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRRERAAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + + FGFV ++
Sbjct: 193 ---------IYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-SSGRSRCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
EA A+ +NG + RLL S
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAS 264
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD ++ +S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-SSGRSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + S A+ E +KR NLYV L +
Sbjct: 250 HMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNLDDSIDDGK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGSH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------VSTMRTLSNPL 396
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 70/322 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
NS+L V + ++ + +L LF+ V V++ ++ RD T +SLGY +VN+ EDA RA+
Sbjct: 57 NSSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPEDASRAM 115
Query: 86 IELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++++ I++ S PS+ + N+++ L + + L F +GTI++ +
Sbjct: 116 DSLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSCK 175
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D + SKG GFV+F + A+ A+ +LNG +
Sbjct: 176 VAMDAVGR----------------SKGYGFVQFEKEETAQAAIDKLNGML---------- 209
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + HF + RF
Sbjct: 210 ----------------LNDKQVFVGHFVRRQDRSRSESGAVPRF---------------- 237
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++V NL E D+ L + FG +G + + V++D Q+ + FGFV +
Sbjct: 238 --------TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKD-QSGNSRSFGFVNFESP 288
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A++ +NG +LG+ +L V
Sbjct: 289 EAAAVAVEKMNGISLGEDVLYV 310
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D +S GYGFV + + E A+ AI +
Sbjct: 146 NVFIKNLDPSIDNKALYETFSAFGTILSCKVAMD-AVGRSKGYGFVQFEKEETAQAAIDK 204
Query: 88 LNGLKLQNKSIKVSY-------ARPSSEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ L +K + V + +R S A+ R N+YV LPK +T ++L+ F YG I
Sbjct: 205 LNGMLLNDKQVFVGHFVRRQDRSRSESGAVPRFTNVYVKNLPKEITDDELKKTFGKYGDI 264
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ S N RSF GFV F A A++++NG +
Sbjct: 265 SSAVVMKDQ--SGNSRSF--------------GFVNFESPEAAAVAVEKMNGI--SLGED 306
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A + R + L R F +RF
Sbjct: 307 VLYVGRAQKKSEREEEL----------RRKFEQ---------ERISRF------------ 335
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ L GS +++ NL D L ++F +G V + KV+ + Q +GFGFV
Sbjct: 336 -----EKLQGSN--LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGL-SRGFGFVA 387
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+F K
Sbjct: 388 YSSPEEASRALSEMNGKMIGRKPLYVAFAQRK 419
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 37/210 (17%)
Query: 15 RSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
RS +S + +N+ V +P+ +T +EL+ F G++ S +++D+ + S +GFVN
Sbjct: 226 RSRSESGAVPRFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVN 284
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYARPSS------------------EAIKRANLY 116
+ E A A+ ++NG+ L + V A+ S E ++ +NLY
Sbjct: 285 FESPEAAAVAVEKMNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLY 344
Query: 117 VSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRF 176
+ L + E L+ +F YG + + +++ + +S+G GFV +
Sbjct: 345 LKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG----------------LSRGFGFVAY 388
Query: 177 NQHIEAEHAMQELNGTIPEGASEPITVKFA 206
+ EA A+ E+NG + +P+ V FA
Sbjct: 389 SSPEEASRALSEMNGKM--IGRKPLYVAFA 416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q SNL + + ++ E+L+ +FS G V SCK++ + + S G+GFV Y E+A RA
Sbjct: 339 QGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMN-SQGLSRGFGFVAYSSPEEASRA 397
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + K + V++A+ E +RA+L
Sbjct: 398 LSEMNGKMIGRKPLYVAFAQRKEE--RRAHL 426
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L +FS +G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ S+ P N+++ L + + L + F +G+I++S++
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ ++ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VYNEHG-----------------SRGFGFVHFETHEAAQKAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + + + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHFKSRQK------------REAELGARALGFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL ++ L LF FG +Q+VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNG-QSRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + +LL V
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYV 263
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + S K++ ++ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINT 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A + A+ N+YV L ++ ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ +++ D S+G GFV F +H EA+ A+ +NG E + +
Sbjct: 218 QSVKVMRDSNGQ----------------SRGFGFVNFEKHEEAQKAVDHMNGK--EVSGQ 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ A Q+ R F + N R++
Sbjct: 260 LLYV-------GRAQKRAER---QSELKRRFEQMKQERQN------RYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D L ++F +G + + KV+ ++ KGFGFVC
Sbjct: 293 -----------GVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G ++S K++RD + QS G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ +E +KR NLYV L + E
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTN 380
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D S G+GFV++ E A +AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAIAT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D + S+G GFV F +H EA+ A+ ++NG E +
Sbjct: 218 LSVKVMRDDIGH----------------SRGFGFVNFEKHEEAQKAVMDMNGK--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D
Sbjct: 260 LLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQD---- 286
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
++ G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 287 -----RATRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 138/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F H A A+ +NG +
Sbjct: 131 VCDDHG-----------------SRGFGFVHFETHEAAHQAIATMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVMDMNGKEVSGRLLYV 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDI-GHSRGFGFVNFEKHEEAQKAVM 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + +R G PL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTVRALGGPL 396
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + Q++T +L LF+ VG+V S ++ RD +T +SLGYG+VNY +DA RAI
Sbjct: 40 TSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAID 99
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L NK+I+VS +R P+ N+++ L K + + L F +GTII+ +I
Sbjct: 100 VLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKI 159
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D SG SKG GFV+++ A+ A+ +LNG +
Sbjct: 160 ATD----------ASGQ------SKGYGFVQYDSEEAAQTAIDKLNGML 192
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 134/338 (39%), Gaps = 64/338 (18%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
+D N+ + + +++ + L FSS G + SCK+ D + QS GYGFV Y E
Sbjct: 121 TDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATD-ASGQSKGYGFVQYDSEE 179
Query: 80 DAERAIIELNGLKLQNKSIKVS-YARPSSE-----AIKRANLYVSGLPKHMTQEDLENLF 133
A+ AI +LNG+ + +K + V + R K N+YV L +++DL F
Sbjct: 180 AAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTF 239
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
YGTI + ++ D SK GFV F +A A+ LNG
Sbjct: 240 GEYGTITSVVVMRDADGK----------------SKCFGFVNFENPEDAAKAVDALNGK- 282
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLT 253
KF + K AQ + R R +++
Sbjct: 283 ----------KFDDKEWYVGK-------AQKKSEREVELKSRFEQTVKEQVDKYQ----- 320
Query: 254 ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
G ++V NL +D L +LF +G + + KV+RDP +
Sbjct: 321 -----------------GVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGI-SR 362
Query: 314 GFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
G GFV + +EA A+ +NG + + L V+ K
Sbjct: 363 GSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRK 400
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 41/223 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++++L+ F G + S ++RD +S +GFVN+ EDA +A+
Sbjct: 219 NNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRD-ADGKSKCFGFVNFENPEDAAKAVD 277
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LNG K +K V A+ SE + NLYV L + E
Sbjct: 278 ALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEK 337
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF YGTI + +++ D SG IS+G GFV F+ EA A+ E
Sbjct: 338 LKELFSEYGTITSCKVMRDP----------SG------ISRGSGFVAFSTPEEASRALGE 381
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
+NG + S+P+ V A R + A L AQ + MR A
Sbjct: 382 MNGKMI--VSKPLYVALAQ----RKEERRARLQAQFSQMRPVA 418
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 15 RSTYQSDVNEQ-----NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
+S ++ V EQ NL V + T+ E+L+ LFS G + SCK++RD + S G
Sbjct: 305 KSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGI-SRG 363
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
GFV + E+A RA+ E+NG + +K + V+ A+ E +RA L
Sbjct: 364 SGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRKEE--RRARL 407
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 24/188 (12%)
Query: 7 MYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQ 66
M T RS + S + L V + ++ + ++ +F +G V S +L RD T +
Sbjct: 1 MAQETSPPRSPFAS------TALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKR 54
Query: 67 SLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHM 124
SLGY +VNY T+DA RAI ELN + + K +++ SY PS NL+V L K +
Sbjct: 55 SLGYAYVNYNNTQDASRAIEELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNLDKSI 114
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+ L +LF PYG I++ +I D + +SKG GFV+F+ A
Sbjct: 115 DNKALHDLFSPYGKILSCKIALD----------------VSNVSKGHGFVQFDTEDAAHT 158
Query: 185 AMQELNGT 192
A++++NGT
Sbjct: 159 AIEKINGT 166
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 141/330 (42%), Gaps = 63/330 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ NL V + +++ + L LFS G++ SCK+ D + S G+GFV + + A AI
Sbjct: 102 SGNLFVKNLDKSIDNKALHDLFSPYGKILSCKIALDVSNV-SKGHGFVQFDTEDAAHTAI 160
Query: 86 IELNGLKLQNKSIKVS-YARPSSE---AIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
++NG L +K + V + R A K N++V L + T EDL+ LF +G I +
Sbjct: 161 EKINGTTLHDKQLFVGPFVRRQERDPPASKFNNVFVKNLSEITTDEDLQKLFGVFGPISS 220
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ E+ SK GFV F +A A+++L+GT + + +
Sbjct: 221 AVVM----------------KEVDGKSKCFGFVNFENPEDAVKAVEDLHGTTFQ--DKEL 262
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
V A R L A KF D + S
Sbjct: 263 YVSRAQKKNEREAELKA-----------------------------KFEHERKDTEDKS- 292
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
P +L ++ NL +D L +F FG V + KV+RDP + KG GFV +
Sbjct: 293 --PTNL-------YLKNLDDGIDDEKLKDMFSAFGNVTSCKVMRDPLGH-SKGSGFVAFS 342
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D A+ A+ +NG +G + L V+ K
Sbjct: 343 TSDAALRAVAQMNGKMIGSKPLYVAMAQKK 372
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + T E+LQ LF G + S ++++ +S +GFVN+ EDA +A+
Sbjct: 192 NNVFVKNLSEITTDEDLQKLFGVFGPISSAVVMKE-VDGKSKCFGFVNFENPEDAVKAVE 250
Query: 87 ELNGLKLQNKSIKVSYA-----------------RPSSEAIKRANLYVSGLPKHMTQEDL 129
+L+G Q+K + VS A R +E NLY+ L + E L
Sbjct: 251 DLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDKSPTNLYLKNLDDGIDDEKL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
+++F +G + + +++ D + SKG GFV F+ A A+ ++
Sbjct: 311 KDMFSAFGNVTSCKVMRDPLGH----------------SKGSGFVAFSTSDAALRAVAQM 354
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
NG + S+P+ V A R L A ++
Sbjct: 355 NGKMI--GSKPLYVAMAQKKEERKAKLEAQFASRG 387
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
GSG +FV NL ++ L LF P+G + + K+ D KG GFV D A
Sbjct: 101 GSG-NLFVKNLDKSIDNKALHDLFSPYGKILSCKIALDVSNV-SKGHGFVQFDTEDAAHT 158
Query: 329 AIQSLNGYALGDRLLQV 345
AI+ +NG L D+ L V
Sbjct: 159 AIEKINGTTLHDKQLFV 175
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 73/300 (24%)
Query: 39 TQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSI 98
T+ +L LFS++G V S ++ RD T +SLGY +VN+ + DA RAI LN + K I
Sbjct: 32 TEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAARAIDVLNFNVVNGKPI 91
Query: 99 KVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRS 156
++ Y++ P+ N+++ L K + + L + F +G I+++++ D
Sbjct: 92 RIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFSQFGNIVSAKVAADGQG------ 145
Query: 157 FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKAL 216
+SKG GFV+F + A+ A+ ++NG +
Sbjct: 146 ----------VSKGYGFVQFAEQEAAQQAIDKVNGML----------------------- 172
Query: 217 AANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFV 276
LN + + + P P T NN ++V
Sbjct: 173 ---LNDK-----------QVYVGPFQRRGERGGGPTT---FNN--------------VYV 201
Query: 277 YNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGY 336
NL +++ L ++FG G + +V +++D + K KGFGFVC + A A++ L+GY
Sbjct: 202 KNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEG-KSKGFGFVCFEESEAASEAVEKLDGY 260
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 133/331 (40%), Gaps = 67/331 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L FS G + S K+ D S GYGFV + E A++AI +
Sbjct: 109 NIFIKNLDKEIDNKALYDTFSQFGNIVSAKVAADGQGV-SKGYGFVQFAEQEAAQQAIDK 167
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRA-------NLYVSGLPKHMTQEDLENLFRPYGTII 140
+NG+ L +K + Y P +R N+YV L + + ++ L+ +F G +
Sbjct: 168 VNGMLLNDKQV---YVGPFQRRGERGGGPTTFNNVYVKNLHESVDEDKLKEVFGAVGKLT 224
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ I+ D SKG GFV F + A A+++L+G + +
Sbjct: 225 SVVIMKDGEGK----------------SKGFGFVCFEESEAASEAVEKLDG-YDKIEDKA 267
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
V A A R L A +A+ R M
Sbjct: 268 WVVCRAQKKAEREAELKAKFDAE---RRERLEKM-------------------------- 298
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
+G +++ NL +D L +LF FG + + +V+RD + +G FV
Sbjct: 299 ---------AGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDA-SGASRGSAFVAF 348
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ DEA A+ +NG G + L V+ K
Sbjct: 349 SSADEATRAVTEMNGKMAGTKPLYVALAQRK 379
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 38/219 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +++ +++L+ +F +VG++ S +++D +S G+GFV + +E A A+
Sbjct: 197 NNVYVKNLHESVDEDKLKEVFGAVGKLTSVVIMKD-GEGKSKGFGFVCFEESEAASEAVE 255
Query: 87 ELNGL-KLQNKSIKVSYARPSSE----------AIKR--------ANLYVSGLPKHMTQE 127
+L+G K+++K+ V A+ +E A +R ANLY+ L +
Sbjct: 256 KLDGYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRERLEKMAGANLYIKNLEDTVDDA 315
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L LF +GTI + R++ D SG S+G FV F+ EA A+
Sbjct: 316 KLRELFAEFGTITSCRVMRD----------ASGA------SRGSAFVAFSSADEATRAVT 359
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAA 226
E+NG + ++P+ V A R L A +A A
Sbjct: 360 EMNGKM--AGTKPLYVALAQRKEDRRMRLQAQFAQRAVA 396
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L +FS +G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ S+ P N+++ L + + L + F +G+I++S++
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ ++ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VYNEHG-----------------SRGFGFVHFETHEAAQKAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + + + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHFKSRQK------------REAELGARALGFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL ++ L LF FG +Q+VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNG-QSRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + +LL V
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYV 263
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + S K++ ++ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINT 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A + A+ N+YV L ++ ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ +++ D S+G GFV F +H EA+ A+ +NG E + +
Sbjct: 218 QSVKVMRDSNGQ----------------SRGFGFVNFEKHEEAQKAVDHMNGK--EVSGQ 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ A Q+ R F + N R++
Sbjct: 260 LLYV-------GRAQKRAER---QSELKRRFEQMKQERQN------RYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D L ++F +G + + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G ++S K++RD + QS G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ +E +KR NLYV L + E
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTN 380
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 145/338 (42%), Gaps = 69/338 (20%)
Query: 10 TTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG 69
+T S S D + +++L V + ++++ L LFS +G V S ++ RD T SLG
Sbjct: 30 STASSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLG 89
Query: 70 YGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQE 127
Y +VN+ E ++AI +LN ++ K ++ +++ PS N+++ L + + +
Sbjct: 90 YAYVNFSDHEAGKQAIEKLNYTPIKGKLCRIMWSQRDPSLRKKGHGNIFIKNLNQDIDNK 149
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L + F +G I++S+I D+ SKG GFV F + A A+
Sbjct: 150 ALFDTFSVFGNILSSKIATDETGK----------------SKGFGFVHFEEESAANEAID 193
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
LNG + G + I V +P K + L A HF N
Sbjct: 194 ALNGMLLNG--QEIYV----APHLTRKERDSQLEETKA----------HFTN-------- 229
Query: 248 KFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP 307
++V N+ ET D + FG G V +V + R P
Sbjct: 230 --------------------------VYVKNIDLETTDEEFKEFFGKIGTVTSVALERGP 263
Query: 308 QTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQV 345
K KGFGFV ++++AV A++ LNG D+ L V
Sbjct: 264 DG-KLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFV 300
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 66/334 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + Q + + L FS G + S K+ D+T +S G+GFV++ A AI
Sbjct: 136 NIFIKNLNQDIDNKALFDTFSVFGNILSSKIATDET-GKSKGFGFVHFEEESAANEAIDA 194
Query: 88 LNGLKLQNKSIKVS-----YARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ L + I V+ R S +A N+YV + T E+ + F GT+
Sbjct: 195 LNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEFFGKIGTV 254
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ + ++ + KG GFV + H +A A++ELNG E +
Sbjct: 255 TS--VALERGPDGKL--------------KGFGFVNYEDHNDAVKAVEELNGA--EFKDQ 296
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A R ++L Q + R L A+++
Sbjct: 297 ELFVGRAQKKYERIQSL----KKQYESTR------------LEKMAKYQ----------- 329
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +FV NL +D L + F PFG + +VKV+R + K KGFGFVC
Sbjct: 330 -----------GVNLFVKNLDDSIDDEKLQEEFAPFGNITSVKVMR-TENGKSKGFGFVC 377
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
++ +EA AI N + + L V+ K +
Sbjct: 378 FSSPEEATKAITEKNQQIVAGKPLYVAIAQRKDV 411
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 1 MMKHEEMY---NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCK 57
++ +E+Y + T+ R + + +N+ V + T EE + F +G V S
Sbjct: 199 LLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEFFGKIGTVTSVA 258
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKR----- 112
L R + G+GFVNY DA +A+ ELNG + +++ + V A+ E I+
Sbjct: 259 LERG-PDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGRAQKKYERIQSLKKQY 317
Query: 113 -------------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NL+V L + E L+ F P+G I + ++ M +EN +
Sbjct: 318 ESTRLEKMAKYQGVNLFVKNLDDSIDDEKLQEEFAPFGNITSVKV----MRTENGK---- 369
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV F+ EA A+ E N I G +P+ V A R LA
Sbjct: 370 --------SKGFGFVCFSSPEEATKAITEKNQQIVAG--KPLYVAIAQRKDVRRSQLAQQ 419
Query: 220 LNAQ 223
+ A+
Sbjct: 420 IQAR 423
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L+ LF P G+V +++V RD T G+ +V ++++ AI+
Sbjct: 48 SLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIEK 107
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + +L ++ + P
Sbjct: 108 LNYTPIKGKLCRIMWSQRDP 127
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
K HG+ IF+ NL + ++ L+ F FG + + K+ D +T K KGFGFV
Sbjct: 131 KKGHGN---IFIKNLNQDIDNKALFDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEEES 186
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
A AI +LNG L + + V+
Sbjct: 187 AANEAIDALNGMLLNGQEIYVA 208
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 79/328 (24%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
+TTQ H ++ L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 48 STTQPHSAS-----------LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 96
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ K ++ +++ P+ + N+++ L +
Sbjct: 97 GYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 156
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D+ + SKG GFV + A +A+
Sbjct: 157 KALHDTFAAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAATNAI 200
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H H S
Sbjct: 201 KHVNGML--------------------------LNEKKVFVGH------HIAKKDRQS-- 226
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
KF + A+ N ++V NL E + +LF +G + + + RD
Sbjct: 227 -KFEEMKANFTN---------------VYVKNLDTEVSNEEFRELFEKYGEITSASISRD 270
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+T K +GFGF ++ A A++ LN
Sbjct: 271 GETGKSRGFGFFYFLKHESAAAAVEELN 298
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 59/290 (20%)
Query: 15 RSTYQSDVNEQNSNLIVNYVPQTMTQ---EELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
+ QS E +N YV T+ EE + LF GE+ S + RD T +S G+G
Sbjct: 221 KKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFG 280
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------------AIKRA------ 113
F + + E A A+ ELN + + + + V A+ E +++A
Sbjct: 281 FFYFLKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGV 340
Query: 114 NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMAS--------------ENVRSFV- 158
NLYV L + E L +LF +G I ++R++ D ENV+
Sbjct: 341 NLYVKNLTDDIDDEKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEAK 400
Query: 159 ---------------------SGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+ T + SKG GFV F+ EA A+ E+N + G
Sbjct: 401 KESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG- 459
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARF 247
+P+ V A R L A++ A+ + AA P A +
Sbjct: 460 -KPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVY 508
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKHV 203
Query: 334 NGYALGDRLLQV 345
NG L ++ + V
Sbjct: 204 NGMLLNEKKVFV 215
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L +FS +G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ S+ P N+++ L + + L + F +G+I++S++
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ ++ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VYNEHG-----------------SRGFGFVHFETHEAAQKAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + + + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHFKSRQK------------REAELGARALGFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL ++ L LF FG +Q+VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNG-QSRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + +LL V
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYV 263
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + S K++ ++ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINT 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A + A+ N+YV L ++ ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ +++ D S+G GFV F +H EA+ A+ +NG E + +
Sbjct: 218 QSVKVMRDSNGQ----------------SRGFGFVNFEKHEEAQKAVDHMNGK--EVSGQ 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ A Q+ R F + N R++
Sbjct: 260 LLYV-------GRAQKRAER---QSELKRRFEQMKQERQN------RYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D L ++F +G + + KV+ + + KGFGFVC
Sbjct: 293 -----------GVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G ++S K++RD + QS G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ +E +KR NLYV L + E
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTN 380
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 139/333 (41%), Gaps = 69/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + + FS+ G + SCK+ +D+ QS GYGFV++ E A +I +
Sbjct: 100 NVFIKNLDKKIDNKAMYDTFSAFGNILSCKVAQDEK-GQSKGYGFVHFETEESANTSIEK 158
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V E K N+YV + +T+E L +F YG+I
Sbjct: 159 VNGMLLNEKKVFVGRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALHEMFEKYGSI 218
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGT-IPEGAS 198
+ R++ S +G GFV F AE A+QELN + +G
Sbjct: 219 TSHRVMMKDGKS-----------------RGFGFVAFENPDAAERAVQELNAKELSDGKV 261
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ N + +F L + L
Sbjct: 262 LYV---------GRAQK----------------------KNERQMELKRRFEQLKMERLT 290
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
HG ++V NL +D L + F P+G + + KV+ D + KGFGFV
Sbjct: 291 R-------YHGVN--LYVKNLDDTIDDERLRKEFAPYGTITSAKVMLD--EGRSKGFGFV 339
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C + DEA A+ +NG +G + L V+ K
Sbjct: 340 CFSAPDEATKAVTEMNGRIVGSKPLYVALAQRK 372
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 134/320 (41%), Gaps = 70/320 (21%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N Q ++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAE
Sbjct: 7 NYQMASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAE 66
Query: 83 RAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
RA+ +N ++ + I++ +++ PS N+++ L K + + + + F +G I+
Sbjct: 67 RALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNIL 126
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ D+ SKG GFV F A +++++NG +
Sbjct: 127 SCKVAQDEKGQ----------------SKGYGFVHFETEESANTSIEKVNGML------- 163
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
LN + + F + R K A L N
Sbjct: 164 -------------------LNEKKVFVGRF----------ISRKEREKELGEKAKLFTN- 193
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
++V N + + L ++F +G++ + +V+ + K +GFGFV
Sbjct: 194 -------------VYVKNFGEDLTEEALHEMFEKYGSITSHRVMM--KDGKSRGFGFVAF 238
Query: 321 TNYDEAVFAIQSLNGYALGD 340
N D A A+Q LN L D
Sbjct: 239 ENPDAAERAVQELNAKELSD 258
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 48/248 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCK-LIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+N+ V + +T+E L +F G + S + +++D +S G+GFV + + AERA+
Sbjct: 192 TNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMKD---GKSRGFGFVAFENPDAAERAV 248
Query: 86 IELNGLKLQN-KSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQ 126
ELN +L + K + V A+ +E +KR NLYV L +
Sbjct: 249 QELNAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDD 308
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E L F PYGTI +++++ D+ SKG GFV F+ EA A+
Sbjct: 309 ERLRKEFAPYGTITSAKVMLDEGR-----------------SKGFGFVCFSAPDEATKAV 351
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
E+NG I S+P+ V A R LA+ + ++R M+H G S
Sbjct: 352 TEMNGRIV--GSKPLYVALAQRKEERKSHLASQYIQRVNSLR-----MQHIGQVYQQSGS 404
Query: 247 FKFAPLTA 254
+ F P A
Sbjct: 405 Y-FMPTIA 411
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D S G+GFV++ E A +AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAIAT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D + S+G GFV F +H EA+ A+ ++NG E +
Sbjct: 218 LSVKVMRDDIGH----------------SRGFGFVNFEKHEEAQKAVMDMNGK--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D
Sbjct: 260 LLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQD---- 286
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
++ G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 287 -----RATRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 138/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + +++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD S+G GFV F H A A+ +NG +
Sbjct: 131 VCDDHG-----------------SRGFGFVHFETHEAAHQAIATMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVMDMNGKEVSGRLLYV 263
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDI-GHSRGFGFVNFEKHEEAQKAVM 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + +R G PL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTVRALGGPL 396
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 68/311 (21%)
Query: 43 LQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSY 102
L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+ +LN ++ + ++ +
Sbjct: 2 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMW 61
Query: 103 AR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSG 160
++ P+ + N+++ L + + L + F +G I++ ++ D+ +
Sbjct: 62 SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN--------- 112
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
SKG GFV + A +A++ +NG + L
Sbjct: 113 -------SKGYGFVHYETAEAATNAIKHVNGML--------------------------L 139
Query: 221 NAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLA 280
N + + H H S KF + A+ N I+V N+
Sbjct: 140 NEKKVFVGH------HIAKKDRQS---KFEEMKANFTN---------------IYVKNVE 175
Query: 281 PETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
+ D LF +G + + + RD +T K +GFGFV ++++ A A++ LN Y L
Sbjct: 176 QDVTDEEFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKG 235
Query: 341 RLLQVSFKTHK 351
+ L V K
Sbjct: 236 QKLYVGRAQKK 246
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 113/287 (39%), Gaps = 64/287 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V V Q +T EE + LF G++ S L RD T +S G+GFVN+ E A A+
Sbjct: 167 TNIYVKNVEQDVTDEEFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 226
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------AIKRA------NLYVSGLPKHMTQED 128
LN +L+ + + V A+ E I++A NLY+ L + E
Sbjct: 227 GLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 286
Query: 129 LENLFRPYGTIITSRIL------------CDKMASENVRSFVSG--TPEIPQ-------- 166
L LF YG I +++++ DK A + +G T E P+
Sbjct: 287 LRELFSSYGNITSAKVMREATAEVPTESDKDKEADKEKAKGEAGEKTEEGPEGKTDDKSE 346
Query: 167 ----------------------ISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
SKG GFV F+ EA A+ E+N + G +P+ V
Sbjct: 347 EKTEEKTEGKTEGAKPEKKHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHG--KPLYVA 404
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAP 251
A R L A++ A+ + AA P A F P
Sbjct: 405 LAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMPQPFMQPAVFYGTP 451
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 64/288 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A AI
Sbjct: 74 GNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNAIK 132
Query: 87 ELNGLKLQNKSIKVSY-----ARPSS-EAIKR--ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + R S E +K N+YV + + +T E+ LF YG
Sbjct: 133 HVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRALFEKYGD 192
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ + D + S+G GFV F+ H A A++ LN +G
Sbjct: 193 ITSATLSRDNETGK---------------SRGFGFVNFSDHEAASAAVEGLNEYELKG-- 235
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L + + AA + +++++
Sbjct: 236 QKLYVGRAQKKHEREEEL----------RKQYEAAR------IEKASKYQ---------- 269
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
G +++ NL+ + +D L +LF +G + + KV+R+
Sbjct: 270 ------------GVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMRE 305
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 69/312 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 63 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 122
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 123 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 182
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 183 VAQDEHGN----------------SKGYGFVHYETDEAASQAIKHVNGML---------- 216
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 217 ----------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN----- 246
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+A E D+ LF FG V + + RD Q K +GFGFV T +
Sbjct: 247 ----------IYVKNIANEVTDDEFRDLFTAFGDVTSSSLARD-QEGKSRGFGFVNFTTH 295
Query: 324 DEAVFAIQSLNG 335
+ A A+ LNG
Sbjct: 296 EAAAKAVDDLNG 307
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T +E + LF++ G+V S L RD+ +S G+GFVN+ E A +A+
Sbjct: 245 TNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQE-GKSRGFGFVNFTTHEAAAKAVD 303
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
+LNG + + + V A R S EA + NLY+ L + E
Sbjct: 304 DLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKASKYQGVNLYIKNLDDEVDDEK 363
Query: 129 LENLFRPYGTIITSRILCD 147
L LF +G I +++++ D
Sbjct: 364 LRQLFADFGPITSAKVMRD 382
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF G+V +++V RD T + G+ +V + A++
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 124
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 125 LNYTLIKGRPCRIMWSQRDP 144
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S GYGFV++ E A RAI
Sbjct: 100 NVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENG--SRGYGFVHFETHEAATRAIET 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E AI+ N+Y+ M + L +F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D N R SKG GFV F +H EA+ A+ ++NG G
Sbjct: 218 LSVKVMMDN----NGR------------SKGFGFVNFEKHEEAQKAVADMNGKEINGRLL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ L Q+ R KF + + +N
Sbjct: 262 YV---------GRAQ---KRLERQSELKR-------------------KFEQMKQERVNR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTE--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A A++ +NG +
Sbjct: 131 VCDENG-----------------SRGYGFVHFETHEAATRAIETMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S + + A + A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRKEREAEVGARAIEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D+ L ++F FG +VKV+ D + KGFGFV ++
Sbjct: 192 --------NVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMD-NNGRSKGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + RLL V
Sbjct: 243 EAQKAVADMNGKEINGRLLYV 263
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M + L+ +FS G+ S K++ D +S G+GFVN+ + E+A++A+
Sbjct: 191 TNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMD-NNGRSKGFGFVNFEKHEEAQKAVA 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVNRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ +E R SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGTITSAKVM-----TEGGR------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAM 234
+NG I +++P+ V A R L + A MR +
Sbjct: 353 MNGRI--VSTKPLYVALAQRKEERKAILTNQYMQRLATMRALPGPL 396
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 139/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCK 172
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 173 VAQDEFGN----------------SKGYGFVHYETAEAANNAIKHVNGML---------- 206
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 207 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 236
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ NL E +D+ ++F FG + + + RD Q K +GFGFV + +
Sbjct: 237 ----------VYIKNLDSEIDDDEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTH 285
Query: 324 DEAVFAIQSLN 334
+ A A++ +N
Sbjct: 286 ESAQAAVEEMN 296
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 62/256 (24%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + +E + +F GE+ S L RD+ +S G+GFVN+ E A+ A+
Sbjct: 235 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVE 293
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------IKRA------NLYVSGLPKHMTQED 128
E+N +++++ + V A+ E +++A NLYV L + E
Sbjct: 294 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 353
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSG-------------TPEIPQI-------- 167
L LF PYGTI +++++ D + +G TPE +
Sbjct: 354 LRELFGPYGTITSAKVMRDTNVERDQSPDSAGKEKEADKENDKEATPEAEKAEKAEEKPS 413
Query: 168 --------------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN 207
SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 414 ESSEEKDKEAKKSDKKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQ 471
Query: 208 SPAGRAKALAANLNAQ 223
R L A++ A+
Sbjct: 472 RKDVRRSQLEASIQAR 487
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 144 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 202
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 203 NGMLLNDKKVFVGHHISK 220
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 46/331 (13%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY--GFVNYYRTEDAERAII 86
L V + Q +T++ L+ +F + G V S K+I DK S GY GFV + AERA+
Sbjct: 92 LYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 151
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA-----NLYVSGLPKHMTQEDLENLFRPYGTIIT 141
LNG ++ I+V++A S+ K +++V L + E L+ F +G++
Sbjct: 152 TLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSE 211
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+R++ D S+G GFV F +A+ A+ ++G S I
Sbjct: 212 ARVMWDMKTGR---------------SRGYGFVAFRDRADADKALGSMDGEWL--GSRAI 254
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
+AN + + + A AA A H P H + M
Sbjct: 255 RCNWANQ---KGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYD------------M 299
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
+ ++ C +V NL P T N L LF FG V ++ D +GF F+ M
Sbjct: 300 VVQQTPQWQTTC-YVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFIKMD 352
Query: 322 NYDEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
+++ A AI LNGY + R L+ S+ +P
Sbjct: 353 SHENAAMAICQLNGYNVNGRPLKCSWGKDRP 383
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 66/219 (30%)
Query: 18 YQSDVN--EQNSN---LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
YQS+ E SN + V + + E LQ FS+ G V +++ D T +S GYGF
Sbjct: 169 YQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGF 228
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYA----RPS---------------------- 106
V + DA++A+ ++G L +++I+ ++A +PS
Sbjct: 229 VAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHH 288
Query: 107 --SEAIKRANL------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
+ I+ ++ YV L + TQ DL LF+ +G ++ +R+ D
Sbjct: 289 FPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD----- 343
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+G F++ + H A A+ +LNG
Sbjct: 344 ----------------RGFAFIKMDSHENAAMAICQLNG 366
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+ E D +L Q F FG+V +V+ D +T + +G+GFV + +A A+ S+
Sbjct: 185 IFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSM 244
Query: 334 NGYALGDRLLQVSFKTHKPLPPV 356
+G LG R ++ ++ K P +
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSI 267
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 104 RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPE 163
R + E KRA LYV GL + +T++ L+ +F G +++ +I+ DK
Sbjct: 82 RAAPEPNKRA-LYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFN----------- 129
Query: 164 IPQISKG--IGFVRFNQHIEAEHAMQELNG 191
SKG GFV F+ AE AMQ LNG
Sbjct: 130 ----SKGYNYGFVEFDDPGAAERAMQTLNG 155
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T+ S Y +VN+ T+DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIKKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GY FV++ E A++AI +
Sbjct: 96 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 153
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L + KS K A ++A + N+Y+ + + E L+ LF +G
Sbjct: 154 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 213
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV + +H +A A++E+NG G
Sbjct: 214 LSVKVMRDPTGK----------------SKGFGFVSYEKHEDANKAVEEMNGKEISG--- 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
V F GRA+ + QA R KF L + ++
Sbjct: 255 --KVIF----VGRAQ---KKVERQAELKR-------------------KFEQLKQERISR 286
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ +V+ + + KGFGFVC
Sbjct: 287 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITRAEVMLE--DGRSKGFGFVC 335
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 336 FSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 367
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E L+ LFS G+ S K++RD T +S G+GFV+Y + EDA +A+
Sbjct: 187 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVE 245
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K I V A+ E +KR NLY+ L + E
Sbjct: 246 EMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 305
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I + ++ E+ R SKG GFV F+ EA A+ E
Sbjct: 306 LRKEFSPFGSITRAEVML-----EDGR------------SKGFGFVCFSSPEEATKAVTE 348
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAA 232
+NG I S+P+ V A R L + A MR A
Sbjct: 349 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPA 390
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 70/267 (26%)
Query: 81 AERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
AERA+ +N ++ K I++ +++ PS N+++ L K + + L + F +G
Sbjct: 61 AERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 120
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I++ +++CD+ S KG FV F A+ A++++NG +
Sbjct: 121 ILSCKVVCDENGS-----------------KGYAFVHFETQEAADKAIEKMNGML----- 158
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
K ++ A + F N
Sbjct: 159 -----------LNDRKVFVGRFKSRKEREAELGAKAKEFTN------------------- 188
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+++ N E +D L +LF FG +VKV+RDP T K KGFGFV
Sbjct: 189 ---------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-TGKSKGFGFV 232
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQV 345
+++A A++ +NG + +++ V
Sbjct: 233 SYEKHEDANKAVEEMNGKEISGKVIFV 259
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 72/326 (22%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
+L V + +T+ + +L +FS +G V S ++ RD T +SLGYG+VNY DA RA+
Sbjct: 39 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 98
Query: 88 LNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LN + K+I++ S+ PS+ N+++ L + + + L + F +G I++ +I
Sbjct: 99 LNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI- 157
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
A ++ R SKG GFV F A A++++NG
Sbjct: 158 ----AHQDGR------------SKGYGFVHFETDEAANLAIEKVNGM------------- 188
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPK 265
Q + F A + L + KF
Sbjct: 189 -----------------QLVGKKVFVAKFVKRSDRLAATGETKFT--------------- 216
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
+FV NL PE + + + F FG + NV +++D + K KGFGFV + +
Sbjct: 217 -------NVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKD-ENDKSKGFGFVNFDDPEA 268
Query: 326 AVFAIQSLNGYALGDRLLQVSFKTHK 351
A A++++N LG R + V K
Sbjct: 269 ARAAVETMNNSQLGSRTIYVGRAQKK 294
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 145/347 (41%), Gaps = 71/347 (20%)
Query: 13 SHR--STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
SHR ST +S V N+ + + +++ + L F + G + SCK+ +S GY
Sbjct: 114 SHRDPSTRKSGV----GNIFIKNLDESIDNKALHDTFIAFGPILSCKIAHQD--GRSKGY 167
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAI------KRANLYVSGLPKHM 124
GFV++ E A AI ++NG++L K + V+ S+ + K N++V L M
Sbjct: 168 GFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNVFVKNLDPEM 227
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+E+++ F +G I I+ D EN + SKG GFV F+ A
Sbjct: 228 AEEEIKEHFSTFGVITNVVIMKD----ENDK------------SKGFGFVNFDDPEAARA 271
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHS 244
A++ +N + + S I V A A R + L + M F
Sbjct: 272 AVETMNNS--QLGSRTIYVGRAQKKAEREQILRRQFEEK--RMEQFQ------------- 314
Query: 245 ARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
K+ G ++V NL +D L Q F +G + + KV+
Sbjct: 315 ---KY--------------------QGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVM 351
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD + KGFGFVC T+ +EA A NG + + + V+ K
Sbjct: 352 RDEKGI-SKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQRK 397
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG ++V +L + L+ +F G V +V+V RD T + G+G+V ++ +AV A
Sbjct: 36 SGVSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRA 95
Query: 330 IQSLNGYALGDRLLQVSFKTHKP 352
+++LN + + +++ + P
Sbjct: 96 MEALNYTPINGKTIRIMWSHRDP 118
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 70/314 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 56 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEK 115
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 116 ALEELNYTPIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 175
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A A++ +NG +
Sbjct: 176 CKVAQDETGA----------------SKGYGFVHYETDEAAAQAIKHVNGML-------- 211
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + + H S KF + A+ N
Sbjct: 212 ------------------LNEKKVYVGY------HIPKKDRQS---KFEEMKANFTN--- 241
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N++P+ DN +LF +G V + + RD Q K +GFGFV T
Sbjct: 242 ------------VYVKNISPDVTDNEFRELFEKYGDVTSSSLARD-QEGKSRGFGFVNFT 288
Query: 322 NYDEAVFAIQSLNG 335
++ A A+ LNG
Sbjct: 289 THEAAYKAVDELNG 302
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 145/376 (38%), Gaps = 108/376 (28%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+T A S GYGFV+Y E A +AI
Sbjct: 147 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGA-SKGYGFVHYETDEAAAQAIK 205
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V Y P + + N+YV + +T + LF YG
Sbjct: 206 HVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYGD 265
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ +S + D+ S+G GFV F H A A+ ELNG G
Sbjct: 266 VTSSSLARDQEGK----------------SRGFGFVNFTTHEAAYKAVDELNGNDFRGQE 309
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ + + +R A R L +++++
Sbjct: 310 LYV---------GRAQ----KKHEREEELRKSYEAAR-----LEKASKYQ---------- 341
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP----------- 307
G +++ NL + +D+ L Q+F FG + + KV+RD
Sbjct: 342 ------------GVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDSLQEGEEEVKDQ 389
Query: 308 --------------------------------QTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
+ K KGFGFVC +N D+A A+ +N
Sbjct: 390 EKDKENQKEAENEAEAESAENAEKKAEKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQ 449
Query: 336 YALGDRLLQVSFKTHK 351
+ ++ L V+ K
Sbjct: 450 RMINNKPLYVALAQRK 465
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 49/262 (18%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
Y+ + R + ++ +N+ V + +T E + LF G+V S L RD+ +S
Sbjct: 221 YHIPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQE-GKS 279
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYA----------RPSSEAIK------ 111
G+GFVN+ E A +A+ ELNG + + + V A R S EA +
Sbjct: 280 RGFGFVNFTTHEAAYKAVDELNGNDFRGQELYVGRAQKKHEREEELRKSYEAARLEKASK 339
Query: 112 --RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMA------------SENVRSF 157
NLY+ L + + L +F +G I +++++ D + EN +
Sbjct: 340 YQGVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDSLQEGEEEVKDQEKDKENQKEA 399
Query: 158 VSGTPEIPQI----------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ SKG GFV F+ +A A+ E+N + ++P+
Sbjct: 400 ENEAEAESAENAEKKAEKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMIN--NKPL 457
Query: 202 TVKFANSPAGRAKALAANLNAQ 223
V A R L A++ A+
Sbjct: 458 YVALAQRKDVRKSQLEASIQAR 479
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 120 LNYTPIKGRPCRIMWSQRDP 139
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T+ S Y +VN+ T+DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIKKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 139/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCK 172
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 173 VAQDEFGN----------------SKGYGFVHYETAEAANNAIKHVNGML---------- 206
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 207 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 236
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ NL E +D+ ++F FG + + + RD Q K +GFGFV + +
Sbjct: 237 ----------VYIKNLDSEIDDDEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTH 285
Query: 324 DEAVFAIQSLN 334
+ A A++ +N
Sbjct: 286 ESAQAAVEEMN 296
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 62/256 (24%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + +E + +F GE+ S L RD+ +S G+GFVN+ E A+ A+
Sbjct: 235 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVE 293
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------IKRA------NLYVSGLPKHMTQED 128
E+N +++++ + V A+ E +++A NLYV L + E
Sbjct: 294 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 353
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSG-------------TPEIPQI-------- 167
L LF PYGTI +++++ D + +G TPE +
Sbjct: 354 LRELFGPYGTITSAKVMRDTNVERDQSPDSAGKEKEADKENDKEATPEAEKAEKAEEKPS 413
Query: 168 --------------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN 207
SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 414 ESSEEKDKEAKKSDKKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQ 471
Query: 208 SPAGRAKALAANLNAQ 223
R L A++ A+
Sbjct: 472 RKDVRRSQLEASIQAR 487
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 144 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 202
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 203 NGMLLNDKKVFVGHHISK 220
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T+ S Y +VN+ T+DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIKKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETNEAAQQAIST 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A ++A+ N+YV L M ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ +NG E + +
Sbjct: 218 LSVKVMRDNSGH----------------SRGFGFVNFEKHEEAQKAVDHMNGK--EVSGQ 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D
Sbjct: 260 QLYV-------GRAQKRGERQN----------------------ELKRRFEQMKQD---- 286
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ G ++V NL D L +F P+G + + KV+ + KGFGFVC
Sbjct: 287 -----RQTRYQGVNLYVKNLDDSISDEKLRTVFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGCIVGTKPLYVALAQRK 371
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L FS VG + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F + A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETNEAAQQAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSHREREAELGAQALAFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDNSGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + + L V
Sbjct: 243 EAQKAVDHMNGKEVSGQQLYV 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + M ++ LQ LF G++ S K++RD + S G+GFVN+ + E+A++A+
Sbjct: 191 TNIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRD-NSGHSRGFGFVNFEKHEEAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ E +KR NLYV L ++ E
Sbjct: 250 HMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGVNLYVKNLDDSISDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L +F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRTVFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 353 MNGCIV--GTKPLYVALAQRKEER-KAILTN 380
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 144/332 (43%), Gaps = 64/332 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
++N+ + + +T+ + L FSS G + SCK+ D+ QS G+GFV Y + E A+ AI
Sbjct: 121 SANIFIKNLDKTIDNKTLHETFSSFGTILSCKVAVDEA-GQSKGFGFVQYDKEEAAQNAI 179
Query: 86 IELNGLKLQNKSIKVS-YARP-----SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ + +K + V + R S + K N++V L + T+EDL +F YG
Sbjct: 180 KSLNGMLINDKPVFVGPFVRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGD- 238
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITS ++ M + S+ GF+ F A HA+QELNG
Sbjct: 239 ITSAVVMIGMDGK---------------SRCFGFINFENPDAASHAVQELNGK------- 276
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GR AQ + R R F L +A K+
Sbjct: 277 --KINDKEWYVGR---------AQKKSEREMELK-RRFEQSLKDAAD-KY---------- 313
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL D+ L +LF FG + + KV+RD Q KG GFV
Sbjct: 314 ----------QGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRD-QNGLSKGSGFVA 362
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + + L V+F K
Sbjct: 363 FSTREEASQALTEMNGKMISGKPLYVAFAQRK 394
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + ++ +L LFS G+V S ++ RD T+ +SLGY +VNY DA RA+
Sbjct: 34 TSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALE 93
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L NK I+V Y+ PSS AN+++ L K + + L F +GTI++ ++
Sbjct: 94 VLNFAALNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCKV 153
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D+ SKG GFV++++ A++A++ LNG +
Sbjct: 154 AVDEAGQ----------------SKGFGFVQYDKEEAAQNAIKSLNGML 186
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T+E+L +F G++ S ++ +S +GF+N+ + A A+
Sbjct: 213 NNVFVKNLSESTTKEDLLKIFGEYGDITSA-VVMIGMDGKSRCFGFINFENPDAASHAVQ 271
Query: 87 ELNGLKLQNKSIKVSYARPSSE-----------AIKRA-------NLYVSGLPKHMTQED 128
ELNG K+ +K V A+ SE ++K A NLY+ L + +
Sbjct: 272 ELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQ 331
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L LF +G I + +++ D+ +SKG GFV F+ EA A+ E
Sbjct: 332 LCELFSNFGKITSYKVMRDQNG----------------LSKGSGFVAFSTREEASQALTE 375
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKAL 216
+NG + G +P+ V FA R L
Sbjct: 376 MNGKMISG--KPLYVAFAQRKEDRKAML 401
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + ++ ++L LFS+ G++ S K++RD+ S G GFV + E+A +A
Sbjct: 314 QGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQ-NGLSKGSGFVAFSTREEASQA 372
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGL 120
+ E+NG + K + V++A+ + ++A L V+ L
Sbjct: 373 LTEMNGKMISGKPLYVAFAQRKED--RKAMLQVTVL 406
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 228 RHFAAAMRHFGNPLHHSARFKFAPLTADLLNN-------SMLPPKSLHGSGWCIFVYNLA 280
R A ++ NPL + + A LNN S P S IF+ NL
Sbjct: 73 RSLGYAYVNYSNPLDAARALEVLNFAA--LNNKPIRVMYSNRDPSSRRSGSANIFIKNLD 130
Query: 281 PETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGD 340
++ L + F FG + + KV D + + KGFGFV + A AI+SLNG + D
Sbjct: 131 KTIDNKTLHETFSSFGTILSCKVAVD-EAGQSKGFGFVQYDKEEAAQNAIKSLNGMLIND 189
Query: 341 R 341
+
Sbjct: 190 K 190
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 63/329 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK+ +D +S GYGFV++ + E A AI +
Sbjct: 130 NIFIKNLDRSVDNKALHDTFSAFGNILSCKVAQD-LKGESKGYGFVHFEKDESARLAIEK 188
Query: 88 LNGLKLQNKSIKVS-----YARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+NG+ L+ K + V R S +K N++V L + ++ ++++ +F +GT+ +
Sbjct: 189 VNGMLLEGKKVYVGPFLRRSERSSDSEVKFTNVFVKNLDEAVSDDEVKAMFAEHGTVNSC 248
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
I+ D SKG GF+ F + +A A+Q LNG
Sbjct: 249 IIMRDDEGK----------------SKGFGFINFEEPEQAASAVQALNGK---------D 283
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSML 262
V GRA+ A+ AM R KF L ++ +
Sbjct: 284 VNCKELYVGRAQK-----KAEREAM-----------------LRAKFEELRSERIAKY-- 319
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
G ++V NL + +D L F FG + + KV+ D K +GFGFVC +
Sbjct: 320 -------QGMNLYVKNLHDDIDDETLRTEFSQFGTITSAKVMVD-SAGKSRGFGFVCYAS 371
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+EA A+ +NG + + + V+ +
Sbjct: 372 PEEATRAVTEMNGRMIKGKPIYVALAQRR 400
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIR 60
+++ +++Y RS SD + +N+ V + + ++ +E++ +F+ G V SC ++R
Sbjct: 193 LLEGKKVYVGPFLRRSERSSDSEVKFTNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMR 252
Query: 61 DKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS--EAIKRA----- 113
D +S G+GF+N+ E A A+ LNG + K + V A+ + EA+ RA
Sbjct: 253 D-DEGKSKGFGFINFEEPEQAASAVQALNGKDVNCKELYVGRAQKKAEREAMLRAKFEEL 311
Query: 114 -----------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTP 162
NLYV L + E L F +GTI +++++ D
Sbjct: 312 RSERIAKYQGMNLYVKNLHDDIDDETLRTEFSQFGTITSAKVMVDSAGK----------- 360
Query: 163 EIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
S+G GFV + EA A+ E+NG + +G +PI V A
Sbjct: 361 -----SRGFGFVCYASPEEATRAVTEMNGRMIKG--KPIYVALA 397
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED---AE 82
NS+L V + + +T+ +L +FS +G V S ++ RD T +SLGY +VNY D AE
Sbjct: 37 NSSLYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAE 96
Query: 83 RAIIELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
RA+ +LN L + +++ S+ P+ N+++ L + + + L + F +G I+
Sbjct: 97 RALDQLNYTPLVGRPMRIMWSHRDPAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGNIL 156
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
+ ++ D SKG GFV F + A A++++NG + EG
Sbjct: 157 SCKVAQDLKGE----------------SKGYGFVHFEKDESARLAIEKVNGMLLEG 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + + E L+ FS G + S K++ D + +S G+GFV Y E+A RA
Sbjct: 320 QGMNLYVKNLHDDIDDETLRTEFSQFGTITSAKVMVD-SAGKSRGFGFVCYASPEEATRA 378
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG ++ K I V+ A+ ++RA L
Sbjct: 379 VTEMNGRMIKGKPIYVALAQ--RRDVRRAQL 407
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 72/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 68 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 127
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 128 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 186
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 187 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV-- 227
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
GR K N + A +R A+ F N
Sbjct: 228 -------GRFK----NRKDREAELRSKAS---EFTN------------------------ 249
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N E +D L +F +G +VKV+ D + K KGFGFV ++
Sbjct: 250 ----------IYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSH 298
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A++ +NG + +L+ V
Sbjct: 299 EAAKKAVEEMNGRDINGQLIFV 320
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 248 TNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 306
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 307 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 366
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ E Q SKG G + F+ +A AM E
Sbjct: 367 LRNEFSSFGSISRVKVM----------------QEEGQ-SKGFGLICFSSPEDATKAMTE 409
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 410 MNGRIL--GSKPLSIALA 425
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 349 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 406
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 407 MTEMNGRILGSKPLSIALAQ 426
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 334 NGYAL-GDRLLQVSFKTHK 351
NG L G ++ FK K
Sbjct: 216 NGKLLKGCKVFVGRFKNRK 234
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVKVMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T+ S Y +VN+ T+DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIKKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +VKV+ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S K++ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRIV--ATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 64/332 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
++N+ + + +T+ + L FS+ G + SCK+ D QS G+GFV Y + E A+ A+
Sbjct: 209 SANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAM 267
Query: 86 IELNGLKLQNKSIKVS-YARP-----SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ + +K + V + R SS+ K N++V L + T+EDL +F YGT
Sbjct: 268 KSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGT- 326
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITS ++ M + S+ GFV F +A A++ELNG
Sbjct: 327 ITSAVVMIGMDGK---------------SRCFGFVNFESPDDAARAVEELNGK------- 364
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + + R F +M+ +
Sbjct: 365 --KINDKEWYVGRAQKKSER---EMDLKRRFEQSMKDAADKYQ----------------- 402
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL D+ L +LF FG + + K++RD Q KG GFV
Sbjct: 403 -----------GQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRD-QNGVSKGSGFVS 450
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + + L V+F K
Sbjct: 451 FSTREEASQALTEMNGKMISGKPLYVAFAQRK 482
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L LFS G+V S ++ RD + +SLGY +VNY DA RA+
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L NK I+V Y+ PSS AN+++ L K + + L + F +G I++ ++
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKV 241
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D + SKG GFV++ + A+ AM+ LNG +
Sbjct: 242 AMDDIGQ----------------SKGFGFVQYEKEESAQSAMKSLNGML 274
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 41/219 (18%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + ++ T+E+L +FS G + S ++ +S +GFVN+ +DA RA+ E
Sbjct: 302 NVFVKNLSESTTKEDLIKVFSEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARAVEE 360
Query: 88 LNGLKLQNKSIKVSYARPSSEA---IKR---------------ANLYVSGLPKHMTQEDL 129
LNG K+ +K V A+ SE +KR NLY+ L +T + L
Sbjct: 361 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 420
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
LF +G I + +I+ D+ +SKG GFV F+ EA A+ E+
Sbjct: 421 RELFSNFGKITSCKIMRDQNG----------------VSKGSGFVSFSTREEASQALTEM 464
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG + G +P+ V FA R + A L AQ + MR
Sbjct: 465 NGKMISG--KPLYVAFAQ----RKEERKAMLQAQFSQMR 497
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + +T ++L+ LFS+ G++ SCK++RD+ S G GFV++ E+A +A
Sbjct: 402 QGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGV-SKGSGFVSFSTREEASQA 460
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V++A+ E
Sbjct: 461 LTEMNGKMISGKPLYVAFAQRKEE 484
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 228 RHFAAAMRHFGNPLHHSAR----FKFAPLTADLLN--NSMLPPKSLHGSGWCIFVYNLAP 281
R A ++ NP+ +AR FAPL + S P S IF+ NL
Sbjct: 161 RSLGYAYVNYSNPMD-AARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDK 219
Query: 282 ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDR 341
++ L F FGA+ + KV D + KGFGFV + A A++SLNG + D+
Sbjct: 220 TIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDK 278
Query: 342 LLQV 345
+ V
Sbjct: 279 PVYV 282
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 141/332 (42%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L FS+ G + SCK+I D+ ++ GYGFV++ E A +AI +
Sbjct: 134 NVFVKNLEKSIDNKALYDTFSTFGRILSCKVISDENGSK--GYGFVHFETQESAGKAIEK 191
Query: 88 LNGLKLQNKSI-----KVSYARPSSEAIKR---ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L N + K R S +K N+Y+ ++M + L +F YG
Sbjct: 192 MNGMLLNNLKVFVGRFKSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPT 251
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F H +A+ A+ ++NG G
Sbjct: 252 LSVKVMTDDCGR----------------SKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQ- 294
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ Q RHF ++
Sbjct: 295 -IYV-------GRAQ---KKRERQTELKRHFEQIKQN----------------------- 320
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ + G +++ NL D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 321 -----QHIRYQGVNLYIKNLDDTINDEHLRKEFSPFGTITSAKVMME--NGRSKGFGFVC 373
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +A A + +NG + + L VS K
Sbjct: 374 FSSSKDAAKASREMNGKLVASKPLYVSLAQRK 405
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M + L +F+ G S K++ D +S G+GFV++ EDA+ A+
Sbjct: 225 TNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDC-GRSKGFGFVSFQSHEDAQAAVD 283
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG +L K I V A+ E +KR NLY+ L + E
Sbjct: 284 DMNGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKNLDDTINDEH 343
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+GTI +++++ EN R SKG GFV F+ +A A +E
Sbjct: 344 LRKEFSPFGTITSAKVMM-----ENGR------------SKGFGFVCFSSSKDAAKASRE 386
Query: 189 LNGTIPEGASEPITVKFA 206
+NG + AS+P+ V A
Sbjct: 387 MNGKLV--ASKPLYVSLA 402
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S N ++L V + +T+ L FS G + S ++ RD T SLGY +VN+
Sbjct: 38 STPNSPTASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRA 97
Query: 80 DAERAIIELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYG 137
AE + +N ++ I++ +++ KR N++V L K + + L + F +G
Sbjct: 98 HAEWVLATMNLDVIKGNPIRIMWSQRDPGQRKRGVGNVFVKNLEKSIDNKALYDTFSTFG 157
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
I++ +++ D+ SKG GFV F A A++++NG +
Sbjct: 158 RILSCKVISDENG-----------------SKGYGFVHFETQESAGKAIEKMNGML 196
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 158/378 (41%), Gaps = 81/378 (21%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L + VP+TM +E+L+ +F G V+ +IRDK T FV +A+ AI L
Sbjct: 90 LFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIRSL 149
Query: 89 NG---LKLQNKSIKVSYARPS----------SEAIKRANLYVSGLPKHMTQEDLENLFRP 135
N L Q S++V YA + +A L++ LPK +T+E ++ +F P
Sbjct: 150 NNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMFSP 209
Query: 136 YGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIP- 194
YG++ I+ D + KG FV+F +A +A+ LNG
Sbjct: 210 YGSVEEVFIMKDNSTG---------------LGKGCSFVKFAYKEQALYAINSLNGKKTL 254
Query: 195 EGASEPITVKFANSPAGRAKAL----------AANLNAQAAAM----------------- 227
EG + P+ V+FA + + + A +N+Q
Sbjct: 255 EGCARPVEVRFAEPKSAKQTQIPMTLQPMQNAAHGMNSQPHVTSPNNINFGQNFGVNNNY 314
Query: 228 -RHFAAAMRHF---GNPLHHSARFK-------------FAPLTADL--LNNSMLPPKSLH 268
R A ++ G P +++ + F T ++ L++S PP
Sbjct: 315 PRQVGAWKEYYSGEGRPYYYNEQTNTTQWEMPKEFETLFMGSTPNMHNLSDSSGPP---- 370
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
G +F++++ E L Q F PFG + + ++ + T + +GF FV + + A
Sbjct: 371 --GANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAA 428
Query: 329 AIQSLNGYALGDRLLQVS 346
AI +NG+ ++ L+V+
Sbjct: 429 AISQMNGFMALNKKLKVT 446
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + +VP Q +L FS GE+ S ++ +K+T ++ G+ FV+Y E A AI
Sbjct: 372 ANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAIS 431
Query: 87 ELNGLKLQNKSIKVS 101
++NG NK +KV+
Sbjct: 432 QMNGFMALNKKLKVT 446
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S GYGFV++ E A RAI
Sbjct: 100 NIFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENG--SRGYGFVHFETHEAANRAIAT 157
Query: 88 LNGLKLQNKSIKVS--------YARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V A ++A++ N+Y+ + M+ E L+ F +G
Sbjct: 158 MNGMLLNDRKVFVGNFKSRREREAEYGAKAMEFTNVYIKNFGEEMSNERLQETFSIFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D + SKG GFV F +H +A+ A++++NG G
Sbjct: 218 LSVKVMTDNIGR----------------SKGFGFVNFEKHQDAQKAVEDMNGKEINGRML 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q+ R F + +R++
Sbjct: 262 YV---------GRAQ---KRMERQSELKRKFEQIKQ------ERVSRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 293 -----------GVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A A+ +NG +
Sbjct: 131 VCDENG-----------------SRGYGFVHFETHEAANRAIATMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K N ++ + A F N
Sbjct: 163 -----LNDRKVFVGNFKSRREREAEYGAKAMEFTN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N E + L + F FG +VKV+ D + KGFGFV +
Sbjct: 193 ---------VYIKNFGEEMSNERLQETFSIFGKTLSVKVMTD-NIGRSKGFGFVNFEKHQ 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A++ +NG + R+L V
Sbjct: 243 DAQKAVEDMNGKEINGRMLYV 263
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M+ E LQ FS G+ S K++ D +S G+GFVN+ + +DA++A+
Sbjct: 191 TNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTD-NIGRSKGFGFVNFEKHQDAQKAVE 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
++NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 DMNGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVSRYQGVNLYVKNLDDGIDDER 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGTITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I +++P+ V A R L + A +R
Sbjct: 353 MNGRI--VSTKPLYVALAQRKEERKAILTNQYMQRLATLR 390
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GY FV++ E A++AI +
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 58
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NGL L + KS K A ++A + N+Y+ + + +L+ LF +G
Sbjct: 59 MNGLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 118
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV + +H +A A+ E+NG E + +
Sbjct: 119 LSVKVMRDSSGK----------------SRGFGFVSYEKHEDANKAVDEMNGK--EMSGK 160
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA R KF L + ++
Sbjct: 161 AIFV-------GRAQ---KKVERQAELKR-------------------KFEQLKQERISR 191
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D L + F PFG++ + KV+ + + KGFGFVC
Sbjct: 192 Y---------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVC 240
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG +G + L V+ K
Sbjct: 241 FPSREEATKAVTEMNGRIVGSKPLYVALAQRK 272
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 38/225 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + L+ LFS G+ S K++RD ++ +S G+GFV+Y + EDA +A+
Sbjct: 92 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSRGFGFVSYEKHEDANKAVD 150
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ K+I V A+ E +KR NLY+ L + E
Sbjct: 151 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 210
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F P+G+I +++++ E+ R SKG GFV F EA A+ E
Sbjct: 211 LRKEFSPFGSITSAKVML-----EDGR------------SKGFGFVCFPSREEATKAVTE 253
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG I S+P+ V A R L A +R A
Sbjct: 254 MNGRIV--GSKPLYVALAQRKEERKAHLTNQYMQHVAGLRALPAG 296
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 64/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS G + SCK+ D+ + S GYGFV++ E A++AI +
Sbjct: 107 NIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEES-NSKGYGFVHFETEESAQKAIEK 165
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L+ K + V +P + ++ N+Y+ + +E LE LF +G I
Sbjct: 166 VNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKI 225
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D SKG GFV F +AE A+ E++ G
Sbjct: 226 TSAAVMVDADGK----------------SKGFGFVAFENPEDAEKAVTEMHEYELPGTER 269
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A N ++A ++ R+ + R++
Sbjct: 270 KLYV-----------CRAQKKNERSAELKR-----RYEQQKVERMQRYQ----------- 302
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D++L Q F +G + + KV+ D + KGFGFVC
Sbjct: 303 -----------GVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNG-RSKGFGFVC 350
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA A+ +NG + + L V+ K
Sbjct: 351 FEKPDEATKAVTEMNGKMMCTKPLYVALAQRK 382
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N + K I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKV 137
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ ++ SKG GFV F A+ A++++NG + EG
Sbjct: 138 ANDEESN----------------SKGYGFVHFETEESAQKAIEKVNGMLLEG-------- 173
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K + A +R R F N
Sbjct: 174 --------KKVYVGKFQPRTARLREMGETARRFTN------------------------- 200
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N A E + L +LF FG + + V+ D K KGFGFV N +
Sbjct: 201 ---------VYIKNFADELDKEALEKLFSKFGKITSAAVMVDADG-KSKGFGFVAFENPE 250
Query: 325 EAVFAIQSLNGYAL 338
+A A+ ++ Y L
Sbjct: 251 DAEKAVTEMHEYEL 264
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +E L+ LFS G++ S ++ D +S G+GFV + EDAE+A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVT 257
Query: 87 ELNGLKL-----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQ 126
E++ +L ++ +K Y + E ++R NLYV L +
Sbjct: 258 EMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVND 317
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L+ F YG I +++++CD +N R SKG GFV F + EA A+
Sbjct: 318 DILKQNFEAYGKITSAKVMCD----DNGR------------SKGFGFVCFEKPDEATKAV 361
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR-HFAAAM 234
E+NG + ++P+ V A R LA+ + A++R H A +M
Sbjct: 362 TEMNGKMM--CTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHNAGSM 408
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 69/321 (21%)
Query: 16 STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
S ++ N +++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY
Sbjct: 44 SAAPTNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 103
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLF 133
D ERA+ ELN ++ K ++ +++ P+ + N+++ L + + L + F
Sbjct: 104 NSAADGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 163
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+G I++ ++ D+ + SKG GFV + A A++ +NG +
Sbjct: 164 AAFGNILSCKVAVDEHGN----------------SKGYGFVHYETSDAANQAIKSVNGML 207
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLT 253
LN + + H H S KF +
Sbjct: 208 --------------------------LNEKKVFVGH------HIPKKDRMS---KFEEMK 232
Query: 254 ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
A+ N I+V N+ ET D+ +LF +G + + + D Q K +
Sbjct: 233 ANFTN---------------IYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQG-KVR 276
Query: 314 GFGFVCMTNYDEAVFAIQSLN 334
GFGFV +++A A+ LN
Sbjct: 277 GFGFVNFIRHEDAAKAVDELN 297
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 65/288 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ D+ S GYGFV+Y ++ A +AI
Sbjct: 143 GNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEH-GNSKGYGFVHYETSDAANQAIK 201
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + + N+YV + T ++ LF YG
Sbjct: 202 SVNGMLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDAETTDDEFRELFEKYGQ 261
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ + D VR F GFV F +H +A A+ ELN +G
Sbjct: 262 ITSASLAHDDQGK--VRGF--------------GFVNFIRHEDAAKAVDELNDLDFKG-- 303
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L AQ SA+++
Sbjct: 304 QKLYVGRAQKKHEREEELRKQYEAQRQ----------------EKSAKYQ---------- 337
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
G ++V NLA E +D L ++F P+GA+ + KV+RD
Sbjct: 338 ------------GVNLYVKNLADEIDDEELRKIFEPYGAITSAKVMRD 373
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 57/251 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + T +E + LF G++ S L D + G+GFVN+ R EDA +A+
Sbjct: 236 TNIYVKNIDAETTDDEFRELFEKYGQITSASLAHD-DQGKVRGFGFVNFIRHEDAAKAVD 294
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
ELN L + + + V A R EA ++ NLYV L + E+
Sbjct: 295 ELNDLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDEE 354
Query: 129 LENLFRPYGTIITSRILCDKMASENVRS-------------------------------- 156
L +F PYG I +++++ D + V
Sbjct: 355 LRKIFEPYGAITSAKVMRDTTPLDKVEGAEKEDGEKKESESSAEDKEEEKKDDADELAKK 414
Query: 157 ----FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGR 212
+ G ++ SKG GFV F+ EA A+ ELN + S+P+ V A R
Sbjct: 415 LDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIH--SKPLYVALAQRKEVR 472
Query: 213 AKALAANLNAQ 223
L A++ A+
Sbjct: 473 KSQLEASIQAR 483
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV D + KG+GFV D A AI+S+
Sbjct: 145 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAVD-EHGNSKGYGFVHYETSDAANQAIKSV 203
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 204 NGMLLNEK 211
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 70/314 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + +T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 57 QNSASLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEK 116
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 117 ALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 176
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A A++ +NG +
Sbjct: 177 CKVAQDENGN----------------SKGYGFVHYETDEAAAQAIKHVNGML-------- 212
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + H H S KF + A+ N
Sbjct: 213 ------------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN--- 242
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N++PE ++ QLF +G V + + RD Q K +GFGFV T
Sbjct: 243 ------------VYVKNISPEATEDDFRQLFEQYGDVTSSSLARD-QEGKSRGFGFVNFT 289
Query: 322 NYDEAVFAIQSLNG 335
++ A A+ LNG
Sbjct: 290 THESAAKAVDELNG 303
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 144/379 (37%), Gaps = 111/379 (29%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A +AI
Sbjct: 148 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEN-GNSKGYGFVHYETDEAAAQAIK 206
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + N+YV + T++D LF YG
Sbjct: 207 HVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNISPEATEDDFRQLFEQYGD 266
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ +S + D+ S+G GFV F H A A+ ELNG G
Sbjct: 267 VTSSSLARDQEGK----------------SRGFGFVNFTTHESAAKAVDELNGKDFRGQD 310
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ GRA+ + + +R A R L + +++
Sbjct: 311 LYV---------GRAQ----KKHEREEELRKSYEAAR-----LEKANKYQ---------- 342
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD------------ 306
G +++ NL + +D+ L Q+F FG + + KV+RD
Sbjct: 343 ------------GVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDTPVENEDEKPAE 390
Query: 307 --------------PQTY--------------------KCKGFGFVCMTNYDEAVFAIQS 332
P+ K KGFGFVC +N D+A A+
Sbjct: 391 EKKEEQEDKDKENKPEETKEGEEGAEKKAEKKSDKKLGKSKGFGFVCFSNPDDATKAVAE 450
Query: 333 LNGYALGDRLLQVSFKTHK 351
+N + ++ L V+ K
Sbjct: 451 MNQRMVSNKPLYVALAQRK 469
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 61 SLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 120
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 121 LNYTIIKGRPCRIMWSQRDP 140
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 64/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS G + SCK+ D+ + S GYGFV++ E A++AI +
Sbjct: 107 NIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEES-NSKGYGFVHFETEESAQKAIEK 165
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L+ K + V +P + ++ N+Y+ + +E LE LF +G I
Sbjct: 166 VNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKI 225
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D SKG GFV F +AE A+ E++ G
Sbjct: 226 TSAAVMVDADGK----------------SKGFGFVAFENPEDAEKAVTEMHEYELPGTER 269
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A N ++A ++ R+ + R++
Sbjct: 270 KLYV-----------CRAQKKNERSAELKR-----RYEQQKVERMQRYQ----------- 302
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D++L Q F +G + + KV+ D + KGFGFVC
Sbjct: 303 -----------GVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNG-RSKGFGFVC 350
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA A+ +NG + + L V+ K
Sbjct: 351 FEKPDEATKAVTEMNGKMMCTKPLYVALAQRK 382
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N + K I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKV 137
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ ++ SKG GFV F A+ A++++NG + EG
Sbjct: 138 ANDEESN----------------SKGYGFVHFETEESAQKAIEKVNGMLLEG-------- 173
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K + A +R R F N
Sbjct: 174 --------KKVYVGKFQPRTARLREMGETARRFTN------------------------- 200
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N A E + L +LF FG + + V+ D K KGFGFV N +
Sbjct: 201 ---------VYIKNFADELDKEALEKLFSKFGKITSAAVMVDADG-KSKGFGFVAFENPE 250
Query: 325 EAVFAIQSLNGYAL 338
+A A+ ++ Y L
Sbjct: 251 DAEKAVTEMHEYEL 264
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +E L+ LFS G++ S ++ D +S G+GFV + EDAE+A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVT 257
Query: 87 ELNGLKL-----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQ 126
E++ +L ++ +K Y + E ++R NLYV L +
Sbjct: 258 EMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVND 317
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L+ F YG I +++++CD +N R SKG GFV F + EA A+
Sbjct: 318 DILKQNFEAYGKITSAKVMCD----DNGR------------SKGFGFVCFEKPDEATKAV 361
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR-HFAAAM 234
E+NG + ++P+ V A R LA+ + A++R H A +M
Sbjct: 362 TEMNGKMM--CTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHNAGSM 408
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 72/326 (22%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
+L V + +T+ + +L +FS +G V S ++ RD T +SLGYG+VNY DA RA+
Sbjct: 38 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 97
Query: 88 LNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRIL 145
LN + K+I++ S+ PS+ N+++ L + + + L + F +G I++ +I
Sbjct: 98 LNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI- 156
Query: 146 CDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKF 205
A ++ R SKG GFV F A A++++NG
Sbjct: 157 ----AHQDGR------------SKGYGFVHFETDEAANLAIEKVNGM------------- 187
Query: 206 ANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPK 265
Q + F A + L + KF
Sbjct: 188 -----------------QLVGKKVFVAKFVKRSDRLAATGETKFT--------------- 215
Query: 266 SLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDE 325
+FV NL PE + + + F FG + NV +++D + K KGFGFV + +
Sbjct: 216 -------NVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKD-ENDKSKGFGFVNFDDPEA 267
Query: 326 AVFAIQSLNGYALGDRLLQVSFKTHK 351
A A++++N LG R + V K
Sbjct: 268 ARAAVETMNNSQLGSRTIYVGRAQKK 293
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 144/347 (41%), Gaps = 71/347 (20%)
Query: 13 SHR--STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
SHR ST +S V N+ + + +++ + L F + G + SCK+ +S GY
Sbjct: 113 SHRDPSTRKSGVG----NIFIKNLDESIDNKALHDTFIAFGPILSCKIAHQD--GRSKGY 166
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAI------KRANLYVSGLPKHM 124
GFV++ E A AI ++NG++L K + V+ S+ + K N++V L M
Sbjct: 167 GFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNVFVKNLDPEM 226
Query: 125 TQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEH 184
+E++ F +G I I+ D EN + SKG GFV F+ A
Sbjct: 227 AEEEINEHFSTFGVITNVVIMKD----ENDK------------SKGFGFVNFDDPEAARA 270
Query: 185 AMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHS 244
A++ +N + + S I V A A R + L + M F
Sbjct: 271 AVETMNNS--QLGSRTIYVGRAQKKAEREQILRRQFEEK--RMEQFQ------------- 313
Query: 245 ARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVV 304
K+ G ++V NL +D L Q F +G + + KV+
Sbjct: 314 ---KY--------------------QGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVM 350
Query: 305 RDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
RD + KGFGFVC T+ +EA A NG + + + V+ K
Sbjct: 351 RDEKGI-SKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQRK 396
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
SG ++V +L + L+ +F G V +V+V RD T + G+G+V ++ +AV A
Sbjct: 35 SGVSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRA 94
Query: 330 IQSLNGYALGDRLLQVSFKTHKP 352
+++LN + + +++ + P
Sbjct: 95 MEALNYTPINGKTIRIMWSHRDP 117
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 64/334 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N N+ + + + + + + FS G + SCK+ D+ + S GYGFV++ E A+ AI
Sbjct: 139 NGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKVAADEDGS-SRGYGFVHFETEESAQIAI 197
Query: 86 IELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYG 137
++NG+ L K + V + ++ +K N++V +H+ QE L +F YG
Sbjct: 198 EKVNGMLLSGKKVYVGKFQTRAQRLKELGESGLKYTNVFVKNFGEHLDQEKLTKMFSKYG 257
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I ++ ++ D G P KG GFV + A+ A+ +LN EG
Sbjct: 258 EITSAVVMTD----------ADGKP------KGFGFVAYADPDAAQKAVDDLNEKTLEGT 301
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
++V A + R A+L + A++ R++
Sbjct: 302 DLKLSVCRAQKKSER----TADLKRKYEALKQ------------ERVQRYQ--------- 336
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G ++V N+ E D L F FG + + KV+ D + + KGFGF
Sbjct: 337 -------------GVNLYVKNIDEELTDEGLRAHFASFGTITSAKVMVD-ENGRSKGFGF 382
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
VC +EA A+ +N +G + L V+ K
Sbjct: 383 VCFEKPEEATAAVTEMNSKMMGSKPLYVALAQRK 416
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 130/322 (40%), Gaps = 69/322 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L + + +T+ L FS G V S ++ RD T+ SLGY +VN+ + DAERA+
Sbjct: 52 ASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 111
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N + + +++ +++ P++ N+++ L + + + + + F +G I++ ++
Sbjct: 112 TMNFETIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKV 171
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ S S+G GFV F A+ A++++NG + G
Sbjct: 172 AADEDGS----------------SRGYGFVHFETEESAQIAIEKVNGMLLSG-------- 207
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K +A ++ + + N
Sbjct: 208 --------KKVYVGKFQTRAQRLKELGESGLKYTN------------------------- 234
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+FV N + L ++F +G + + V+ D K KGFGFV + D
Sbjct: 235 ---------VFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTDADG-KPKGFGFVAYADPD 284
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
A A+ LN L L++S
Sbjct: 285 AAQKAVDDLNEKTLEGTDLKLS 306
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 11 TQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGY 70
T++ R + + +N+ V + + QE+L +FS GE+ S ++ D + G+
Sbjct: 217 TRAQRLKELGESGLKYTNVFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTD-ADGKPKGF 275
Query: 71 GFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSS------------EAIKR------ 112
GFV Y + A++A+ +LN L+ +K+S R EA+K+
Sbjct: 276 GFVAYADPDAAQKAVDDLNEKTLEGTDLKLSVCRAQKKSERTADLKRKYEALKQERVQRY 335
Query: 113 --ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKG 170
NLYV + + +T E L F +GTI +++++ D EN R SKG
Sbjct: 336 QGVNLYVKNIDEELTDEGLRAHFASFGTITSAKVMVD----ENGR------------SKG 379
Query: 171 IGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
GFV F + EA A+ E+N + S+P+ V A R LA+ + A +R
Sbjct: 380 FGFVCFEKPEEATAAVTEMNSKM--MGSKPLYVALAQRKEDRRAQLASQYMQKLATLR 435
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L +FS +G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ S+ P N+++ L + + L + F +G+I++S++
Sbjct: 71 TMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ ++ S+G GFV F H A+ A+ +NG +
Sbjct: 131 VYNEHG-----------------SRGFGFVHFETHEAAQKAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + + + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHFKSRQK------------REAELGARALGFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG Q+VKV+RD + +GFGF+ ++
Sbjct: 192 --------NIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSNG-QSRGFGFINFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + +LL V
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYV 263
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + S K++ ++ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINT 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A + A+ N+YV L M ++ L++LF +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLRVDMDEQGLQDLFSQFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ +++ D S+G GF+ F +H EA+ A+ +NG E + +
Sbjct: 218 QSVKVMRDSNGQ----------------SRGFGFINFEKHEEAQKAVDHMNGK--EVSGQ 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ A N + +F + + N
Sbjct: 260 LLYV-------GRAQKRAERQN----------------------ELKRRFEQMKQERQNR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D+ L ++F +G + + KV+ ++ KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSINDDRLKEVFSTYGVITSAKVM--TESSHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + M ++ LQ LFS G+ +S K++RD + QS G+GF+N+ + E+A++A+
Sbjct: 191 TNIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEEAQKAVD 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ +E +KR NLYV L + +
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDR 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTN 380
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 69/338 (20%)
Query: 16 STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
ST S +++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY
Sbjct: 41 STTPSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 100
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLF 133
T D ERA+ +LN ++ K ++ +++ P+ + N+++ L + + L + F
Sbjct: 101 NNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+G I++ ++ D+ + SKG GFV + A +A++ +NG +
Sbjct: 161 AAFGNILSCKVAQDEFGN----------------SKGYGFVHYETAEAANNAIKHVNGML 204
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLT 253
LN + + H H S KF +
Sbjct: 205 --------------------------LNDKKVFVGH------HISKKDRQS---KFEEMK 229
Query: 254 ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
A+ N +++ N+ E D ++F FG + + + RD Q K +
Sbjct: 230 ANFTN---------------VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSR 273
Query: 314 GFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GFGFV + +D A A+ +N + + L V K
Sbjct: 274 GFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKK 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 52/246 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + Q +T EE + +F GE+ S L RD+ +S G+GFVN+ + A+ A+
Sbjct: 233 TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVD 291
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------IKRA------NLYVSGLPKHMTQED 128
E+N +++ + + V A+ E +++A NLYV L + E
Sbjct: 292 EMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 351
Query: 129 LENLFRPYGTIITSRILCDKMASENV-------------------------------RSF 157
L LF P+GTI +++++ D + +
Sbjct: 352 LRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEKPKESEEEP 411
Query: 158 VSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALA 217
+I SKG GFV F+ EA A+ E+N + G +P+ V A R L
Sbjct: 412 KKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRRSQLE 469
Query: 218 ANLNAQ 223
A++ A+
Sbjct: 470 ASIQAR 475
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHFK------------SRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 64/331 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +T+ + L FS+ G + SCK+ D + QS GYGFV + + E A AI
Sbjct: 116 ANIFIKNLDKTIDNKALHDTFSAFGGILSCKVAVD-GSGQSKGYGFVQFEQEESALTAIE 174
Query: 87 ELNGLKLQNKSIKVS-----YARPSSEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTII 140
++NG+ L +K + V R S + + N+YV L ++ T++DL+N+F YGTI
Sbjct: 175 KVNGMLLNDKQVFVGPFVRRQERDQSGGVSKFNNVYVKNLGENTTEDDLKNVFGAYGTIS 234
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
++ ++ D SK GFV F EH
Sbjct: 235 SAVVMRDSDGK----------------SKCFGFVNF------EH---------------- 256
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
P AKA+ A LN + + + + R KF + +
Sbjct: 257 --------PDNAAKAVEA-LNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKY 307
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
G +++ NL +D L +LF +G + + KV+RDPQ + +G GFV
Sbjct: 308 ---------QGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQG-QSRGSGFVAF 357
Query: 321 TNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 358 SSPEEATRAVTEMNGKMVGSKPLYVALAQRK 388
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + +++ +L LF+ VG+V S ++ RD T +SLGY +VNY +DA RA+
Sbjct: 27 STSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRAL 86
Query: 86 IELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN L I++ S+ PS AN+++ L K + + L + F +G I++ +
Sbjct: 87 ELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILSCK 146
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ D SKG GFV+F Q A A++++NG +
Sbjct: 147 VAVDGSGQ----------------SKGYGFVQFEQEESALTAIEKVNGML 180
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 41/235 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + T+++L+++F + G + S ++RD + +S +GFVN+ ++A +A+
Sbjct: 207 NNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRD-SDGKSKCFGFVNFEHPDNAAKAVE 265
Query: 87 ELNGLKLQNKSIKVSYARPSSE--AIKRA----------------NLYVSGLPKHMTQED 128
LNG K K V A+ SE A RA NLY+ L + E
Sbjct: 266 ALNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEK 325
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L LF YGTI + +++ D S+G GFV F+ EA A+ E
Sbjct: 326 LRELFADYGTITSCKVMRDPQGQ----------------SRGSGFVAFSSPEEATRAVTE 369
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHH 243
+NG + S+P+ V A R + A L A A MR + P++H
Sbjct: 370 MNGKMV--GSKPLYVALAQ----RKEERRARLQAAFAQMRTSVSPAVPTSLPMYH 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + T+ E+L+ LF+ G + SCK++RD QS G GFV + E+A RA
Sbjct: 308 QGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRD-PQGQSRGSGFVAFSSPEEATRA 366
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + +K + V+ A+ E +RA L
Sbjct: 367 VTEMNGKMVGSKPLYVALAQRKEE--RRARL 395
>gi|442630336|ref|NP_001261439.1| alan shepard, isoform H [Drosophila melanogaster]
gi|440215327|gb|AGB94134.1| alan shepard, isoform H [Drosophila melanogaster]
Length = 371
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + + Q T ++L ++ + G + S K I DKTT + GYGFV++ + AE A+
Sbjct: 21 TNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVK 80
Query: 87 ELNGLKLQNKSIKVSYA---RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
L G +Q + KV RP+ E NLY++ LP H + DLE + YG ++++R
Sbjct: 81 GLQGKGVQAQMAKVGIWVLHRPAIEQ-DPTNLYIANLPPHFKETDLEAMLSKYGQVVSTR 139
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D+ + SKG+GF R + E +Q NG GA +P+ V
Sbjct: 140 ILRDQQMN----------------SKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLV 183
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAA 232
KFA+ + K L + A A R +A
Sbjct: 184 KFADG-GPKKKNLFKTPDPNARAWRDVSA 211
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
+ + NLY+ GL + T +DL N+ YGTII+++ + DK ++ K
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNK---------------CK 62
Query: 170 GIGFVRFNQHIEAEHAMQELNG 191
G GFV F Q AE A++ L G
Sbjct: 63 GYGFVDFEQPAFAECAVKGLQG 84
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ L T D L + +G + + K + D T KCKG+GFV A A++ L
Sbjct: 23 LYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGL 82
Query: 334 NGYALGDRLLQVS-FKTHKP 352
G + ++ +V + H+P
Sbjct: 83 QGKGVQAQMAKVGIWVLHRP 102
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 70/324 (21%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 52 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEK 111
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 112 ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 171
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ S SKG GFV + A+ A++ +NG +
Sbjct: 172 CKVAQDENGS----------------SKGYGFVHYETDEAAQQAIKHVNGML-------- 207
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + H H S KF + A+ N
Sbjct: 208 ------------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN--- 237
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N++PE D+ +LF G V + + R+ Q K +GFGFV T
Sbjct: 238 ------------VYVKNISPEVTDDEFRELFERHGDVTSSSIARE-QDGKSRGFGFVNFT 284
Query: 322 NYDEAVFAIQSLNGYALGDRLLQV 345
++ A A++ LN L + L V
Sbjct: 285 THEAAAKAVEELNNKDLHGQELYV 308
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T +E + LF G+V S + R++ +S G+GFVN+ E A +A+
Sbjct: 236 TNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQD-GKSRGFGFVNFTTHEAAAKAVE 294
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEA--IKRA------NLYVSGLPKHMTQED 128
ELN L + + V A R S EA I++A NLY+ L + +
Sbjct: 295 ELNNKDLHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDDK 354
Query: 129 LENLFRPYGTIITSRIL 145
L +F +G I +++++
Sbjct: 355 LRIMFAEFGPITSAKVM 371
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 56 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 115
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 116 LNYTLIKGRPCRIMWSQRDP 135
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 142/333 (42%), Gaps = 70/333 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS G + SCK+ D ++ QS GYGFV Y E A++A+ +
Sbjct: 129 NIFIKNLDKSIDHKALHDTFSVFGNIISCKVAVD-SSGQSKGYGFVQYETEESAQKAMGQ 187
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKR---------ANLYVSGLPKHMTQEDLENLFRPYGT 138
LNG+ L +K + Y P +R N+YV L + T +DL+N+F +G
Sbjct: 188 LNGMLLNDKQV---YVGPFLRRQERDSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGK 244
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ ++ D G P KG GFV F +A A++ LNG
Sbjct: 245 ITSAVVMKDG----------EGKP------KGFGFVNFENADDAAKAVESLNGK------ 282
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
T GRA+ + R + + K A AD
Sbjct: 283 ---TFDDKEWFVGRAQ----------------KKSEREMELKVQYEQSLKEA---ADKFQ 320
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+S L +V NL D L +LF P+G V + KV+RDP +G GFV
Sbjct: 321 SSNL------------YVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGM-SRGSGFV 367
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ ++G + ++ L V+ K
Sbjct: 368 AFSTPEEATKAMSEMSGKMIENKPLYVAVAQRK 400
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L FS +G+V S ++ RD T +SLGYG+VN+ +DA RAI
Sbjct: 40 TSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQ 99
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
ELN + L K ++V Y+ PS N+++ L K + + L + F +G II+ ++
Sbjct: 100 ELNYIPLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISCKV 159
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D SKG GFV++ A+ AM +LNG +
Sbjct: 160 AVDSSGQ----------------SKGYGFVQYETEESAQKAMGQLNGML 192
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 41/223 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ T ++L+++F G++ S +++D + G+GFVN+ +DA +A+
Sbjct: 219 TNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKD-GEGKPKGFGFVNFENADDAAKAVE 277
Query: 87 ELNGLKLQNKS---------------IKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
LNG +K +KV Y + EA + +NLYV L ++ E
Sbjct: 278 SLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVKNLDDSVSDEK 337
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF PYGT+ + +++ D +S+G GFV F+ EA AM E
Sbjct: 338 LKELFTPYGTVTSCKVMRDPNG----------------MSRGSGFVAFSTPEEATKAMSE 381
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFA 231
++G + E ++P+ V A R + A L AQ + MR A
Sbjct: 382 MSGKMIE--NKPLYVAVAQ----RKEDRRARLQAQFSQMRPVA 418
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 4 HEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT 63
EM Q +S ++ Q+SNL V + +++ E+L+ LF+ G V SCK++RD
Sbjct: 299 EREMELKVQYEQSLKEAADKFQSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRD-P 357
Query: 64 TAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
S G GFV + E+A +A+ E++G ++NK + V+ A+ + +RA L
Sbjct: 358 NGMSRGSGFVAFSTPEEATKAMSEMSGKMIENKPLYVAVAQRKED--RRARL 407
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 259 NSMLPPKSLHGSGWC---------IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQT 309
N +PP + G G ++V +L P D+ L+ F G V +V+V RD T
Sbjct: 18 NGSVPPAMVTGPGAAAAAQFGTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLAT 77
Query: 310 YKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
+ G+G+V T+ +A AIQ LN L + ++V + P
Sbjct: 78 RRSLGYGYVNFTSPQDAARAIQELNYIPLNGKPVRVMYSHRDP 120
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ ++ G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSR--GFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+ GFV F +H EA+ A+ +NG G
Sbjct: 218 LSVKVMRDNSGH----------------SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRL- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
AGRA+ N + +F + D L
Sbjct: 261 --------LYAGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 72/320 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTY-KCKGFGFVCMTNY 323
I+V NL + ++ L LF FG + +VKV+RD + +C FGFV +
Sbjct: 192 --------NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRC--FGFVNFEKH 241
Query: 324 DEAVFAIQSLNGYALGDRLL 343
+EA A+ +NG + RLL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLL 261
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 147/324 (45%), Gaps = 55/324 (16%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T+ LQ +F S+G VE CKL+R + ++ YGFV+Y+ A AI+ LNG L +
Sbjct: 36 VTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAILSLNGRHLFGQP 91
Query: 98 IKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
IKV++A SS+ + N++V L +T L F Y + +R++ D+
Sbjct: 92 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGR-- 149
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
S+G GFV F EA++A+ +L G S I +A AK
Sbjct: 150 -------------SRGFGFVSFRNQQEAQNAINDLTGKWL--GSRQIRCNWA------AK 188
Query: 215 ALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
N + Q + + ++ N + + +NN P +L + +
Sbjct: 189 GAGVNEDKQGSDTK----SVVELSNGSSEDGK--------ESVNNDA-PENNLQYT--TV 233
Query: 275 FVYNLAPETEDNVLWQLFGPFGA--VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+V NLAPE L + F GA ++ V++ RD KGFGFV + EA AIQ
Sbjct: 234 YVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRD------KGFGFVRYNTHAEAALAIQM 287
Query: 333 LNGYA-LGDRLLQVSFKTHKPLPP 355
N + L R ++ S+ + KP PP
Sbjct: 288 GNTRSFLCGRQIKCSWGS-KPTPP 310
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 57/211 (27%)
Query: 18 YQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
Y S E S N+ V + +T L FS+ +++ D+ T +S G+GFV+
Sbjct: 98 YASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVS 157
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYA----------------------RPSSEAIKR 112
+ ++A+ AI +L G L ++ I+ ++A SSE K
Sbjct: 158 FRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKE 217
Query: 113 A-------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
+ +YV L ++Q DL F G + E VR
Sbjct: 218 SVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVI----------EEVRI--- 264
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
Q KG GFVR+N H EA A+Q N
Sbjct: 265 ------QRDKGFGFVRYNTHAEAALAIQMGN 289
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 141/329 (42%), Gaps = 45/329 (13%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L + + +T++ L+ +F + G V+S K+I DK + + L YGFV Y AERA+ L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMATL 152
Query: 89 NGLKLQNKSIKVSYARPSSEAIKRA-----NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
NG ++ I+V++A S+ + K +++V L + E L F +G++ +R
Sbjct: 153 NGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 212
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D S+G GFV F + +AE A+ ++G S I
Sbjct: 213 VMWDMKTGR---------------SRGYGFVAFRERPDAEKALSSMDGEWL--GSRAIRC 255
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
+AN + + + A AA H P H + M+
Sbjct: 256 NWANQ---KGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYD------------MVA 300
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++ C +V NL P T N L LF FG V + D +GF FV M +
Sbjct: 301 AQTPQWQTTC-YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTH 353
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
+ A AI L+GY + R L+ S+ +P
Sbjct: 354 ENAAMAICQLSGYNVNGRPLKCSWGKDRP 382
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+ E D VL Q F FG+V +V+ D +T + +G+GFV +A A+ S+
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 243
Query: 334 NGYALGDRLLQVSFKTHKPLPPV 356
+G LG R ++ ++ K P +
Sbjct: 244 DGEWLGSRAIRCNWANQKGQPSI 266
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 66/219 (30%)
Query: 18 YQSDVN--EQNSN---LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
YQS+ + E SN + V + + E L FS+ G V +++ D T +S GYGF
Sbjct: 168 YQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGF 227
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYA----RPS---------------------- 106
V + DAE+A+ ++G L +++I+ ++A +PS
Sbjct: 228 VAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHH 287
Query: 107 --SEAIKRANL------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
+ ++ ++ YV L + TQ DL LF+ +G ++ +R D
Sbjct: 288 FPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD----- 342
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+G FV+ + H A A+ +L+G
Sbjct: 343 ----------------RGFAFVKMDTHENAAMAICQLSG 365
>gi|442630338|ref|NP_729057.3| alan shepard, isoform I [Drosophila melanogaster]
gi|440215328|gb|AAF50792.4| alan shepard, isoform I [Drosophila melanogaster]
Length = 377
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + + Q T ++L ++ + G + S K I DKTT + GYGFV++ + AE A+
Sbjct: 21 TNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVK 80
Query: 87 ELNGLKLQNKSIKVSYA---RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
L G +Q + KV RP+ E NLY++ LP H + DLE + YG ++++R
Sbjct: 81 GLQGKGVQAQMAKVGIWVLHRPAIEQ-DPTNLYIANLPPHFKETDLEAMLSKYGQVVSTR 139
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
IL D+ + SKG+GF R + E +Q NG GA +P+ V
Sbjct: 140 ILRDQQMN----------------SKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLV 183
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAA 232
KFA+ + K L + A A R +A
Sbjct: 184 KFADG-GPKKKNLFKTPDPNARAWRDVSA 211
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 72/226 (31%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
+ + NLY+ GL + T +DL N+ YGTII+++ + DK ++ K
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNK---------------CK 62
Query: 170 GIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRH 229
G GFV F Q AE A++ L G + AQ A +
Sbjct: 63 GYGFVDFEQPAFAECAVKGLQGK--------------------------GVQAQMAKVGI 96
Query: 230 FAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLW 289
+ LH A + D N +++ NL P ++ L
Sbjct: 97 WV---------LHRPA------IEQDPTN---------------LYIANLPPHFKETDLE 126
Query: 290 QLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
+ +G V + +++RD Q KG GF M + ++ IQ NG
Sbjct: 127 AMLSKYGQVVSTRILRD-QQMNSKGVGFARMESREKCEQIIQMFNG 171
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ L T D L + +G + + K + D T KCKG+GFV A A++ L
Sbjct: 23 LYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGL 82
Query: 334 NGYALGDRLLQVS-FKTHKP 352
G + ++ +V + H+P
Sbjct: 83 QGKGVQAQMAKVGIWVLHRP 102
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 64/332 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
++N+ + + +T+ + L FS+ G + SCK+ D QS G+GFV Y + E A+ A+
Sbjct: 209 SANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDI-GQSKGFGFVQYEKEESAQSAM 267
Query: 86 IELNGLKLQNKSIKVS-YARP-----SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
LNG+ + +K + V + R SS+ K N++V L + T+EDL +F YGT
Sbjct: 268 KSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGT- 326
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
ITS ++ M + S+ GFV F +A A++ELNG
Sbjct: 327 ITSAVVMIGMDGK---------------SRCFGFVNFESPDDAARAVEELNGK------- 364
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + + R F +M+ +
Sbjct: 365 --KINDKEWYVGRAQKKSER---EMDLKRRFEQSMKDAADKYQ----------------- 402
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL D+ L +LF FG + + K++RD Q KG GFV
Sbjct: 403 -----------GQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRD-QNGVSKGSGFVS 450
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
+ +EA A+ +NG + + L V+F K
Sbjct: 451 FSTREEASQALTEMNGKMISGKPLYVAFAQRK 482
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T +L LFS G+V S ++ RD + +SLGY +VNY DA RA+
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
LN L NK I+V Y+ PSS AN+++ L K + + L + F +G I++ ++
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKV 241
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
D + SKG GFV++ + A+ AM+ LNG +
Sbjct: 242 AMDDIGQ----------------SKGFGFVQYEKEESAQSAMKSLNGML 274
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 41/219 (18%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + ++ T+E+L +FS G + S ++ +S +GFVN+ +DA RA+ E
Sbjct: 302 NVFVKNLSESTTKEDLIKVFSEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARAVEE 360
Query: 88 LNGLKLQNKSIKVSYARPSSEA---IKR---------------ANLYVSGLPKHMTQEDL 129
LNG K+ +K V A+ SE +KR NLY+ L +T + L
Sbjct: 361 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 420
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
LF +G I + +I+ D+ +SKG GFV F+ EA A+ E+
Sbjct: 421 RELFSNFGKITSCKIMRDQNG----------------VSKGSGFVSFSTREEASQALTEM 464
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG + G +P+ V FA R + A L AQ + MR
Sbjct: 465 NGKMISG--KPLYVAFAQ----RKEERKAMLQAQFSQMR 497
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + +T ++L+ LFS+ G++ SCK++RD+ S G GFV++ E+A +A
Sbjct: 402 QGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGV-SKGSGFVSFSTREEASQA 460
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V++A+ E
Sbjct: 461 LTEMNGKMISGKPLYVAFAQRKEE 484
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 228 RHFAAAMRHFGNPLHHSAR----FKFAPLTADLLN--NSMLPPKSLHGSGWCIFVYNLAP 281
R A ++ NP+ +AR FAPL + S P S IF+ NL
Sbjct: 161 RSLGYAYVNYSNPMD-AARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDK 219
Query: 282 ETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDR 341
++ L F FGA+ + KV D + KGFGFV + A A++SLNG + D+
Sbjct: 220 TIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDK 278
Query: 342 LLQV 345
+ V
Sbjct: 279 PVYV 282
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 138/334 (41%), Gaps = 70/334 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D S GYGFV+Y +E A+ AI +
Sbjct: 99 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVTD-GKGNSKGYGFVHYETSEAADSAIAK 157
Query: 88 LNGLKLQNKSIKVS--YAR----PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
+NG L K + V AR P S+ K N+Y+ L + T+EDL+ F +GT+ +
Sbjct: 158 VNGKMLNGKIVYVGRFIARKERTPGSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQS 217
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
+ ++ D I + FV F H A A +ELNG
Sbjct: 218 AVLMKDPR----------------DIGRQFAFVNFEDHEAAHRATEELNG---------- 251
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
R + G S R F +
Sbjct: 252 --------------------------RKLGDKEVYVGRAQKKSERESFL--------RKL 277
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFG--PFGAVQNVKVVRDPQTYKCKGFGFVC 319
++ G +++ NL D L +LF PFG + + KV+ D + +GFGFVC
Sbjct: 278 REERAQKYQGINLYIKNLDDTVNDEELHKLFSALPFGQITSCKVMSDDKG-NSRGFGFVC 336
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
TN ++A A+ +NG + ++ + V+ K +
Sbjct: 337 YTNPEDASKAVSEMNGKMVANKPIYVALAERKDV 370
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q+++L V + T+T+ L +F +VG V S ++ RD T +SLGY +VN++ DAERA
Sbjct: 8 QSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERA 67
Query: 85 IIELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+ LN ++ + ++ S+ PS + N+++ L K + + L + F +G I++
Sbjct: 68 LDTLNYTLIKGRPCRIMWSHRDPSIRKSGQGNIFIKNLDKSIDNKALYDTFSAFGNILSC 127
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEG 196
+++ D + SKG GFV + A+ A+ ++NG + G
Sbjct: 128 KVVTDGKGN----------------SKGYGFVHYETSEAADSAIAKVNGKMLNG 165
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 39/211 (18%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLG--YGFVNYYRTEDA 81
E+ +N+ + + + T+E+L+ F + G V+S L++D + +G + FVN+ E A
Sbjct: 186 EKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKD---PRDIGRQFAFVNFEDHEAA 242
Query: 82 ERAIIELNGLKLQNKSIKVSYARPSSE--------------AIKRANLYVSGLPKHMTQE 127
RA ELNG KL +K + V A+ SE + NLY+ L + E
Sbjct: 243 HRATEELNGRKLGDKEVYVGRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDE 302
Query: 128 DLENLFR--PYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA 185
+L LF P+G I + +++ D + S+G GFV + +A A
Sbjct: 303 ELHKLFSALPFGQITSCKVMSDDKGN----------------SRGFGFVCYTNPEDASKA 346
Query: 186 MQELNGTIPEGASEPITVKFANSPAGRAKAL 216
+ E+NG + A++PI V A R+ L
Sbjct: 347 VSEMNGKMV--ANKPIYVALAERKDVRSAKL 375
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 141/336 (41%), Gaps = 66/336 (19%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+ N+ + + ++ + L FS+ G + SCK+ D++ S GYGFV+Y E A+ AI
Sbjct: 131 SGNVFIKNLDPSIDNKALHDTFSAFGNILSCKIALDES-GNSKGYGFVHYETEEAADNAI 189
Query: 86 IELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYG 137
+NG+ L +K + V P E K N+YV L + + E+ + +G
Sbjct: 190 KHVNGMLLNDKKVYVGRHVPKKERQAKIEQFRAKFTNVYVKNLDESVKDEEFNEMLAKFG 249
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
I ++ + D SKG GFV F H +A+ A+ LN T E
Sbjct: 250 PITSALVQTDDEGK----------------SKGFGFVNFENHEDAQKAVDALNET--EHK 291
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
+ + V A R + L + + A L A+++
Sbjct: 292 GKILYVARAQKKTEREEEL----------RKQYEQAK------LEKLAKYQ--------- 326
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
G +++ NL + +D L Q F +G + + KV+ D + KGFGF
Sbjct: 327 -------------GVNLYIKNLDDDIDDEKLRQEFSVYGVITSAKVMCD-EKDTSKGFGF 372
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPL 353
VC ++ DEA A+ +NG +G + + V+ K +
Sbjct: 373 VCFSSPDEATKAVTEMNGRMIGSKPIYVALAQRKEI 408
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +++ EE + + G + S L++ +S G+GFVN+ EDA++A+
Sbjct: 225 TNVYVKNLDESVKDEEFNEMLAKFGPITSA-LVQTDDEGKSKGFGFVNFENHEDAQKAVD 283
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LN + + K + V+ A+ +E + NLY+ L + E
Sbjct: 284 ALNETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDIDDEK 343
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F YG I +++++CD+ + SKG GFV F+ EA A+ E
Sbjct: 344 LRQEFSVYGVITSAKVMCDEKDT----------------SKGFGFVCFSSPDEATKAVTE 387
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG + S+PI V A R L A + AQ MR
Sbjct: 388 MNGRMI--GSKPIYVALAQRKEIRRSQLEAQM-AQRNQMR 424
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L +F+ +G V S ++ RD T +SLGY +VN++ D ERA+
Sbjct: 43 SASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERAL 102
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
LN ++ K ++ +++ PS N+++ L + + L + F +G I++ +
Sbjct: 103 ESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDPSIDNKALHDTFSAFGNILSCK 162
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
I D+ + SKG GFV + A++A++ +NG +
Sbjct: 163 IALDESGN----------------SKGYGFVHYETEEAADNAIKHVNGML 196
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 269 GSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVF 328
GSG +F+ NL P ++ L F FG + + K+ D ++ KG+GFV + A
Sbjct: 130 GSG-NVFIKNLDPSIDNKALHDTFSAFGNILSCKIALD-ESGNSKGYGFVHYETEEAADN 187
Query: 329 AIQSLNGYALGDRLLQVS 346
AI+ +NG L D+ + V
Sbjct: 188 AIKHVNGMLLNDKKVYVG 205
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 147/324 (45%), Gaps = 55/324 (16%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T+ LQ +F S+G VE CKL+R + ++ YGFV+Y+ A AI+ LNG L +
Sbjct: 64 VTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAILSLNGRHLFGQP 119
Query: 98 IKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
IKV++A SS+ + N++V L +T L F Y + +R++ D+
Sbjct: 120 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGR-- 177
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
S+G GFV F EA++A+ +L G S I +A AK
Sbjct: 178 -------------SRGFGFVSFRNQQEAQNAINDLTGKWL--GSRQIRCNWA------AK 216
Query: 215 ALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
N + Q + + ++ N + + +NN P +L + +
Sbjct: 217 GAGVNEDKQGSDTK----SVVELSNGSSEDGK--------ESVNNDA-PENNLQYT--TV 261
Query: 275 FVYNLAPETEDNVLWQLFGPFGA--VQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
+V NLAPE L + F GA ++ V++ RD KGFGFV + EA AIQ
Sbjct: 262 YVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRD------KGFGFVRYNTHAEAALAIQM 315
Query: 333 LNGYA-LGDRLLQVSFKTHKPLPP 355
N + L R ++ S+ + KP PP
Sbjct: 316 GNTRSFLCGRQIKCSWGS-KPTPP 338
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 57/211 (27%)
Query: 18 YQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
Y S E S N+ V + +T L FS+ +++ D+ T +S G+GFV+
Sbjct: 126 YASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVS 185
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYA----------------------RPSSEAIKR 112
+ ++A+ AI +L G L ++ I+ ++A SSE K
Sbjct: 186 FRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKE 245
Query: 113 A-------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
+ +YV L ++Q DL F G + E VR
Sbjct: 246 SVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVI----------EEVRI--- 292
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELN 190
Q KG GFVR+N H EA A+Q N
Sbjct: 293 ------QRDKGFGFVRYNTHAEAALAIQMGN 317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 249 FAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQ 308
AP + + + LPP + ++V N+ + + +L ++FG G V+ K+VR +
Sbjct: 30 LAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEK 89
Query: 309 TYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ +GFV + A AI SLNG L + ++V++
Sbjct: 90 S----SYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNW 124
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 68/311 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+A+
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 119
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 120 DELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 180 VAQDEHGN----------------SKGYGFVHYETDEAASQAIKHVNGML---------- 213
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 214 ----------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN----- 243
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ + D+ LF FG V + + RD +T K +GFGFV T++
Sbjct: 244 ----------IYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSH 293
Query: 324 DEAVFAIQSLN 334
++A A++ LN
Sbjct: 294 EDASKAVEELN 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 49/243 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T ++ + LF G V S L RD+ T +S G+GFVN+ EDA +A+
Sbjct: 242 TNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVE 301
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
ELN + +++ V A R S EA ++ NLY+ L + +
Sbjct: 302 ELNEKEFHGQNLYVGRAQKKHEREEELRRSYEAARQEKASKYQGVNLYIKNLDDEVDDDK 361
Query: 129 LENLFRPYGTIITSRILCDKM--------------ASENVR--------------SFVSG 160
L LF +G I +++++ + + A ENV+ +
Sbjct: 362 LRQLFSEFGPITSAKVMRETLAEGADEPEAKDAADAKENVKEDEEAAKTEGDEGDAKADK 421
Query: 161 TPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANL 220
P++ + SKG GFV F +A A+ E+N + G +P+ V A R L A++
Sbjct: 422 KPKLGK-SKGFGFVCFGNPDDATKAVAEMNQRMVNG--KPLYVALAQRKDVRKNQLEASI 478
Query: 221 NAQ 223
A+
Sbjct: 479 QAR 481
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 38/80 (47%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF G+V +++V RD T + G+ +V + A+
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALDE 121
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 122 LNYTLIKGRPCRIMWSQRDP 141
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ + A+RAI
Sbjct: 75 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHDAAQRAIST 132
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E ++ N+YV L + + L++LF +G +
Sbjct: 133 MNGMLLNDRKVFVGHFKSRREREAELGARVMEFTNIYVKNLQVDVDERGLQDLFSQFGKM 192
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ +NG E +
Sbjct: 193 LSVKVMRDSSGH----------------SRGFGFVNFEKHEEAQKAVVHMNGK--EVSGR 234
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D LN
Sbjct: 235 LLYV-------GRAQKRLERQN----------------------ELKRRFEQMKQDRLNR 265
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D L + F P+G + + KV+ + KGFGFVC
Sbjct: 266 Y---------QGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVC 314
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 315 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 346
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 70/301 (23%)
Query: 47 FSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR-- 104
FS G + S ++ RD T +SL Y ++N+ + DAERA+ +N ++ + I++ +++
Sbjct: 6 FSPAGPILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRIMWSQRD 65
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
P N+++ L + + L + F +G I++ +++CD+
Sbjct: 66 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG-------------- 111
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
S+G GFV F H A+ A+ +NG + LN +
Sbjct: 112 ---SRGFGFVHFETHDAAQRAISTMNGML--------------------------LNDRK 142
Query: 225 AAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETE 284
+ HF S R + A L A ++ + I+V NL + +
Sbjct: 143 VFVGHFK------------SRREREAELGARVMEFT------------NIYVKNLQVDVD 178
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDRLLQ 344
+ L LF FG + +VKV+RD + +GFGFV ++EA A+ +NG + RLL
Sbjct: 179 ERGLQDLFSQFGKMLSVKVMRDSSGH-SRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLY 237
Query: 345 V 345
V
Sbjct: 238 V 238
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + + LQ LFS G++ S K++RD ++ S G+GFVN+ + E+A++A++
Sbjct: 166 TNIYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRD-SSGHSRGFGFVNFEKHEEAQKAVV 224
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 225 HMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLDDSINDEK 284
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 285 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 327
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + +R G PL
Sbjct: 328 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTVRALGGPL 371
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E A RAI
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAANRAIET 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A ++A++ N+Y+ + + E L+N+F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ S+G GFV F H +A A+ E+NG G
Sbjct: 218 LSVCVMTDERGR----------------SRGFGFVNFVNHGDARRAVTEMNGKELNGRVL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ L Q R F + R++
Sbjct: 262 YV---------GRAQ---KRLERQGELKRKFEQIKQ------ERIQRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ D +GFGFVC
Sbjct: 293 -----------GVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTD--GGHSRGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G++ S ++ RD T +SLGY ++N+ + DAE A+
Sbjct: 11 ASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ + + + + L + F +G I++ ++
Sbjct: 71 TMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A A++ +NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAANRAIETMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S + + A + A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRKEREAEMGAKAVEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + + L +F FG +V V+ D + + +GFGFV N+
Sbjct: 192 --------NVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERG-RSRGFGFVNFVNHG 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L R+L V
Sbjct: 243 DARRAVTEMNGKELNGRVLYV 263
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E+L+++F+ G+ S ++ D+ +S G+GFVN+ DA RA+
Sbjct: 191 TNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDER-GRSRGFGFVNFVNHGDARRAVT 249
Query: 87 ELNGLKLQNKSIKVSYARP---------------SSEAIKR---ANLYVSGLPKHMTQED 128
E+NG +L + + V A+ E I+R NLYV L + E
Sbjct: 250 EMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ D S+G GFV F+ EA A+ E
Sbjct: 310 LRKEFAPYGTITSAKVMTDGGH-----------------SRGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I +++P+ V A R L + A++R
Sbjct: 353 MNGRIV--STKPLYVALAQRKEERKAILTNQYIQRLASIR 390
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T+ L FS G + S ++ RD + +SLGY ++N+ + DAERA+ +N ++ +
Sbjct: 22 VTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQPADAERALDTMNFEVIKGRP 81
Query: 98 IKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVR 155
I++ +++ P N+++ L + + L + F +G I++ +++CD+ S
Sbjct: 82 IRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDEHGS---- 137
Query: 156 SFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI----PEGASEPITVKFANS--- 208
+G GFV F A A+ +NG + GA S
Sbjct: 138 -------------RGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVGSGKR 184
Query: 209 -PAGRAKALAANLNAQAAAM---RHFAAAMRHFGNPLHHSAR-----FKFAPLTADLLNN 259
P+GR++ A + AQA + + + G + R KF + + +N
Sbjct: 185 PPSGRSRP-AGPVPAQAVTSMNGKELNGRVLYVGRAQKRTERQSELKRKFEQIKQERVNR 243
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + + KGFGFVC
Sbjct: 244 YQ---------GVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTE--SGHSKGFGFVC 292
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 293 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 324
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 19 QSDVNE-QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYR 77
Q VN Q NL V + + E+L+ FS G + S K++ + + S G+GFV +
Sbjct: 238 QERVNRYQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTE--SGHSKGFGFVCFSS 295
Query: 78 TEDAERAIIELNGLKLQNKSIKVSYARPSSE 108
E+A +A+ E+NG + K + V+ A+ E
Sbjct: 296 PEEATKAVTEMNGRIVSTKPLYVALAQRKEE 326
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ ++ GYGFV++ E A RAI
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAANRAIET 157
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A ++A++ N+Y+ + + E L+N+F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ S+G GFV F H +A A+ E+NG G
Sbjct: 218 LSVCVMTDERGR----------------SRGFGFVNFVNHGDARRAVTEMNGKELNGRVL 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ L Q R F + R++
Sbjct: 262 YV---------GRAQ---KRLERQGELKRKFEQIKQ------ERIQRYQ----------- 292
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ D +GFGFVC
Sbjct: 293 -----------GVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDGG--HSRGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G++ S ++ RD T +SLGY ++N+ + DAE A+
Sbjct: 11 ASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ + + + + L + F +G I++ ++
Sbjct: 71 TMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A A++ +NG +
Sbjct: 131 VCDENG-----------------SKGYGFVHFETQEAANRAIETMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S + + A + A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRKEREAEMGAKAVEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + + L +F FG +V V+ D + + +GFGFV N+
Sbjct: 192 --------NVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERG-RSRGFGFVNFVNHG 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L R+L V
Sbjct: 243 DARRAVTEMNGKELNGRVLYV 263
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + + E+L+++F+ G+ S ++ D+ +S G+GFVN+ DA RA+
Sbjct: 191 TNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDER-GRSRGFGFVNFVNHGDARRAVT 249
Query: 87 ELNGLKLQNKSIKVSYARP---------------SSEAIKR---ANLYVSGLPKHMTQED 128
E+NG +L + + V A+ E I+R NLYV L + E
Sbjct: 250 EMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ D S+G GFV F+ EA A+ E
Sbjct: 310 LRKEFAPYGTITSAKVMTDGGH-----------------SRGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I +++P+ V A R L + A++R
Sbjct: 353 MNGRIV--STKPLYVALAQRKEERKAILTNQYIQRLASIR 390
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 151/340 (44%), Gaps = 55/340 (16%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D + S + N PQ +T+ LQ +FSS+G +E CKLIR + ++ YGFV+Y+
Sbjct: 41 DSSTCRSVYVGNIHPQ-VTEPLLQEVFSSIGPIEGCKLIRKEKSS----YGFVDYFDRRS 95
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYG 137
A +II LNG L + IKV++A SS+ + N++V L +T L F Y
Sbjct: 96 AAVSIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 155
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+ +R++ D+ S+G GFV F +A+ A+ ++NG
Sbjct: 156 SCSDARVMWDQKTGR---------------SRGYGFVAFRNEQDAQSAINDINGKWL--G 198
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
S I +A K + + Q++ R + + + AP
Sbjct: 199 SRQIRCNWAT------KGANSGDDKQSSDSRSVVELTSGTSDGGQEKSN-EDAP-----E 246
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGA--VQNVKVVRDPQTYKCKGF 315
NN ++V NLAPE L + F GA +++V+V RD KGF
Sbjct: 247 NNPQYT---------TVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRD------KGF 291
Query: 316 GFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKPLPP 355
GFV + EA AIQ+ N + + ++ S+ + KP PP
Sbjct: 292 GFVRYSTNAEAALAIQTGNARVVCGKPIKCSWGS-KPTPP 330
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 18 YQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
Y S E S N+ V + +T L FS +++ D+ T +S GYGFV
Sbjct: 119 YASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVA 178
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYA---------RPSSEAIKRANLY--VSGLPKH 123
+ +DA+ AI ++NG L ++ I+ ++A + SS++ L S +
Sbjct: 179 FRNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQE 238
Query: 124 MTQEDLENLFRPYGTIITSRILCDKMASENVRSF---VSGTPEIPQI--SKGIGFVRFNQ 178
+ ED Y T+ + + + + R F +GT E ++ KG GFVR++
Sbjct: 239 KSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYST 298
Query: 179 HIEAEHAMQELNGTIPEGASEPITVKFANSP 209
+ EA A+Q N + G +PI + + P
Sbjct: 299 NAEAALAIQTGNARVVCG--KPIKCSWGSKP 327
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 125/269 (46%), Gaps = 55/269 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ +EEL+ +F G + S +++D+ +S +GFVN+ EDA RA+
Sbjct: 206 TNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDED-GKSRCFGFVNFENAEDAARAVE 264
Query: 87 ELNGLKLQNKS---------------IKVSYARPSSEAIKRA---NLYVSGLPKHMTQED 128
LNG KL NK +K + + + EA+ ++ NLY+ L ++ E
Sbjct: 265 ALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLDDSISDEK 324
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF PYGTI + +++ D SG +SKG GFV F+ EA A+ E
Sbjct: 325 LKELFSPYGTITSCKVMRDP----------SG------VSKGSGFVAFSNPEEASRALSE 368
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA--------MRHFGNP 240
+NG + S+P+ V A R + A L AQ + MR A A M G P
Sbjct: 369 MNGKMV--VSKPLYVALAQ----RKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGP 422
Query: 241 LHHSARFKFAPLTADLLNNSMLPPKSLHG 269
F P A MLPP++ G
Sbjct: 423 GLGQQIFYGQPQPA------MLPPQAGFG 445
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 143/334 (42%), Gaps = 68/334 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N N+ + + + + + L FS+ G + SCK+ D ++ QS GYGFV Y E A++AI
Sbjct: 114 NGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSEEAAQKAI 172
Query: 86 IELNGLKLQNKSIKVS-YARP-----SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+LNG+ L +K + V + R + + + N++V L + +E+L +F +G I
Sbjct: 173 EKLNGMLLNDKQVYVGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAI 232
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ ++ D+ S+ GFV F +A A++ LNG
Sbjct: 233 TSVAVMKDEDGK----------------SRCFGFVNFENAEDAARAVEALNG-------- 268
Query: 200 PITVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
K N GR AQ + R L H +F + +
Sbjct: 269 ---YKLDNKDWFVGR---------AQKKSEREME---------LKH----RFEQSAKEAV 303
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ S G +++ NL D L +LF P+G + + KV+RDP KG GF
Sbjct: 304 DKS---------QGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGV-SKGSGF 353
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V +N +EA A+ +NG + + L V+ K
Sbjct: 354 VAFSNPEEASRALSEMNGKMVVSKPLYVALAQRK 387
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 18/173 (10%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ ++L V + +T +L LF+ +G+V S ++ RD T+ +SLGYG+VNY +DA
Sbjct: 23 NQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAA 82
Query: 83 RAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
RA+ LN L K I++ Y+ P+ N+++ L K + + L + F +G I+
Sbjct: 83 RALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNIL 142
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ ++ D SG SKG GFV+++ A+ A+++LNG +
Sbjct: 143 SCKVAVDS----------SGQ------SKGYGFVQYDSEEAAQKAIEKLNGML 179
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + +++ E+L+ LFS G + SCK++RD + S G GFV + E+A RA
Sbjct: 307 QGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGV-SKGSGFVAFSNPEEASRA 365
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + +K + V+ A+ E +RA L
Sbjct: 366 LSEMNGKMVVSKPLYVALAQRKEE--RRARL 394
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 226 AMRHFAAAMRHFGNPLHHSAR----FKFAPLTAD---LLNNSMLPPKSLHGSGWCIFVYN 278
+ R ++GNP +AR F PL ++ ++ P G+G IF+ N
Sbjct: 64 SQRSLGYGYVNYGNP-QDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNG-NIFIKN 121
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL 338
L + L F FG + + KV D + + KG+GFV + + A AI+ LNG L
Sbjct: 122 LDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSEEAAQKAIEKLNGMLL 180
Query: 339 GDRLLQV 345
D+ + V
Sbjct: 181 NDKQVYV 187
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 72/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 68 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 127
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 128 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 186
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 187 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV-- 227
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
GR K N + A +R A+ F N
Sbjct: 228 -------GRFK----NRKDREAELRSKAS---EFTN------------------------ 249
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N + +D L +F +G +VKV+ D + K KGFGFV ++
Sbjct: 250 ----------IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSH 298
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A++ +NG + +L+ V
Sbjct: 299 EAAKKAVEEMNGRDINGQLIFV 320
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 248 TNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 306
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 307 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 366
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ E Q SKG G + F+ +A AM E
Sbjct: 367 LRNEFSSFGSISRVKVM----------------QEEGQ-SKGFGLICFSSPEDATKAMTE 409
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 410 MNGRIL--GSKPLSIALA 425
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 349 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 406
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 407 MTEMNGRILGSKPLSIALAQ 426
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 334 NGYAL-GDRLLQVSFKTHK 351
NG L G ++ FK K
Sbjct: 216 NGKLLKGCKVFVGRFKNRK 234
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 72/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 68 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 127
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 128 TMNFDMIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 186
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 187 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV-- 227
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
GR K N + A +R A+ F N
Sbjct: 228 -------GRFK----NRKDREAELRSKAS---EFTN------------------------ 249
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N + +D L +F +G +VKV+ D + K KGFGFV ++
Sbjct: 250 ----------IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSH 298
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A++ +NG + +L+ V
Sbjct: 299 EAAKKAVEEMNGRDINGQLIFV 320
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 70/329 (21%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G++ S K++ D ++ GY FV++ A+RAI E
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAADRAIEE 214
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L+ K+ K A S+A + N+Y+ M E L+++F YG
Sbjct: 215 MNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKT 274
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F+ H A+ A++E+NG G +
Sbjct: 275 LSVKVMTDS----------SGK------SKGFGFVSFDSHEAAKKAVEEMNGRDING--Q 316
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA + F
Sbjct: 317 LIFV-------GRAQK---KVERQAELKQMF----------------------------- 337
Query: 260 SMLPPKSLHG-SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
L + + G G +++ NL +D L F FG++ VKV+++ + KGFG +
Sbjct: 338 EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG--QSKGFGLI 395
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
C ++ ++A A+ +NG LG + L ++
Sbjct: 396 CFSSPEDATKAMTEMNGRILGSKPLSIAL 424
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 248 TNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 306
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 307 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 366
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ ++ SKG G + F+ +A AM E
Sbjct: 367 LRNEFSSFGSISRVKVMQEEGQ-----------------SKGFGLICFSSPEDATKAMTE 409
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 410 MNGRIL--GSKPLSIALA 425
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 349 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 406
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 407 MTEMNGRILGSKPLSIALAQ 426
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 334 NGYAL-GDRLLQVSFKTHK 351
NG L G ++ FK K
Sbjct: 216 NGKLLKGCKVFVGRFKNRK 234
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 72/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 67 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 126
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 127 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 185
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 186 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV-- 226
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
GR K N + A +R A+ F N
Sbjct: 227 -------GRFK----NRKDREAELRSKAS---EFTN------------------------ 248
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N + +D L +F +G +VKV+ D + K KGFGFV ++
Sbjct: 249 ----------IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSH 297
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A++ +NG + +L+ V
Sbjct: 298 EAAKKAVEEMNGRDINGQLIFV 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 247 TNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 305
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 306 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 365
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ E Q SKG G + F+ +A AM E
Sbjct: 366 LRNEFSSFGSISRVKVM----------------QEEGQ-SKGFGLICFSSPEDATKAMTE 408
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 409 MNGRIL--GSKPLSIALA 424
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 348 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 405
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 406 MTEMNGRILGSKPLSIALAQ 425
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 157 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 214
Query: 334 NGYAL-GDRLLQVSFKTHK 351
NG L G ++ FK K
Sbjct: 215 NGKLLKGCKVFVGRFKNRK 233
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 69/328 (21%)
Query: 9 NTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSL 68
N + S S + +++L V + ++T+ L LFSS+G+V S ++ RD T +SL
Sbjct: 43 NDASTPYSASPSTAAQHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 102
Query: 69 GYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQ 126
GY +VNY T D ERA+ +LN ++ + ++ +++ P+ + N+++ L +
Sbjct: 103 GYAYVNYNNTADGERALEDLNYTSIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDN 162
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L + F +G I++ ++ D++ + SKG GFV + A A+
Sbjct: 163 KALHDTFSQFGNILSCKVAQDELGN----------------SKGYGFVHYETAEAANQAI 206
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSAR 246
+ +NG + LN + + H A +
Sbjct: 207 KSVNGML--------------------------LNDKKVFVGHHIA---------KRDRQ 231
Query: 247 FKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
K + A+ N +++ N+ D +LF P+G V + + RD
Sbjct: 232 SKLEEMKANFTN---------------VYIKNIDESVSDEEFTKLFEPYGEVVSATITRD 276
Query: 307 PQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+ K +GFGFV +++ A A++ LN
Sbjct: 277 -ENGKSRGFGFVNFASHESAAKAVEELN 303
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 19/139 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + ++++ EE LF GEV S + RD+ +S G+GFVN+ E A +A+
Sbjct: 242 TNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRDEN-GKSRGFGFVNFASHESAAKAVE 300
Query: 87 ELNGLKLQNKSIKVSYARPS---SEAIKR---------------ANLYVSGLPKHMTQED 128
ELN + K + V A+ E ++R NLYV L + +
Sbjct: 301 ELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAARMEKASKYQGVNLYVKNLTDDVDDDK 360
Query: 129 LENLFRPYGTIITSRILCD 147
L LF YGTI +++++ D
Sbjct: 361 LRELFSSYGTITSAKVMRD 379
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+S+
Sbjct: 151 VFIKNLDAAIDNKALHDTFSQFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANQAIKSV 209
Query: 334 NGYALGDR 341
NG L D+
Sbjct: 210 NGMLLNDK 217
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 68/312 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFS +G V S ++ RD + +SLGY +VNY T D E+A+
Sbjct: 60 SASLYVGELDTSVTEAMLFELFSQIGSVASIRVCRDAISRRSLGYAYVNYNTTADGEKAL 119
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A A++ +NG +
Sbjct: 180 VAQDESGA----------------SKGYGFVHYETDEAAAQAIKHVNGML---------- 213
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 214 ----------------LNEKKVFVGH------HIPKKDRQS---KFEEMKANFTN----- 243
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I+V N+ E + +LF FG V + + RD +T K +GFGFV N+
Sbjct: 244 ----------IYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINH 293
Query: 324 DEAVFAIQSLNG 335
+ A A+ LNG
Sbjct: 294 EHAATAVDELNG 305
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 148/381 (38%), Gaps = 112/381 (29%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D++ A S GYGFV+Y E A +AI
Sbjct: 149 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDESGA-SKGYGFVHYETDEAAAQAIK 207
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + N+YV +P T+E+ LF +G
Sbjct: 208 HVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATEEEFRELFEKFGD 267
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ ++ + D + S+G GFV F H A A+ ELNG +G
Sbjct: 268 VTSASLARDAETGK---------------SRGFGFVNFINHEHAATAVDELNGKDFKG-- 310
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L R + AA + +++++
Sbjct: 311 QDLYVGRAQKKHEREEEL----------RRSYEAAR------IEKASKYQ---------- 344
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD------------ 306
G ++V NL + +D L +LF FG++ + KV+RD
Sbjct: 345 ------------GVNLYVKNLDDDIDDEKLRELFQSFGSITSAKVMRDTPAETAEAEEKK 392
Query: 307 --------------------------------PQTY----KCKGFGFVCMTNYDEAVFAI 330
P+ K KGFGFVC N DEA A+
Sbjct: 393 EKDEEKNKENKDTKETKETKKEGEAETEEASAPKAKRSLGKSKGFGFVCFNNPDEATKAV 452
Query: 331 QSLNGYALGDRLLQVSFKTHK 351
+N + ++ L V+ K
Sbjct: 453 SDMNQRMVNNKPLYVALAQRK 473
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 110/258 (42%), Gaps = 53/258 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P T+EE + LF G+V S L RD T +S G+GFVN+ E A A+
Sbjct: 242 TNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATAVD 301
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEA--IKRA------NLYVSGLPKHMTQED 128
ELNG + + + V A R S EA I++A NLYV L + E
Sbjct: 302 ELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQGVNLYVKNLDDDIDDEK 361
Query: 129 LENLFRPYGTIITSRILCDKMAS----------------------ENVRSFVSGTPEIPQ 166
L LF+ +G+I +++++ D A E + G E +
Sbjct: 362 LRELFQSFGSITSAKVMRDTPAETAEAEEKKEKDEEKNKENKDTKETKETKKEGEAETEE 421
Query: 167 I-----------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA 215
SKG GFV FN EA A+ ++N + ++P+ V A R
Sbjct: 422 ASAPKAKRSLGKSKGFGFVCFNNPDEATKAVSDMNQRMVN--NKPLYVALAQRKDVRKSQ 479
Query: 216 LAANLNAQAAAMRHFAAA 233
L A++ A+ AAA
Sbjct: 480 LEASIQARNQIRMQQAAA 497
>gi|340383573|ref|XP_003390291.1| PREDICTED: protein alan shepard-like, partial [Amphimedon
queenslandica]
Length = 443
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
SNL + + T E+L+ + G + S K I DK T Q GYGFV++ DA +A+
Sbjct: 169 SNLYIRGLSDNCTDEDLRKMCEKYGTINSTKSILDKKTGQCKGYGFVDFSEEADALKALE 228
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
L + V +AR E NLY+S LPK+ +++DLE L PYG II++R+L
Sbjct: 229 SLQAI-----GTDVQFARRQEE--DPTNLYLSNLPKYYSEKDLEKLLSPYGRIISTRVLR 281
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
+ S+G+GFVR + E A + LN TI G + +KFA
Sbjct: 282 EPSG----------------YSRGVGFVRLDSRENCEKAREALNNTIFPGTDLELNIKFA 325
Query: 207 NS 208
+S
Sbjct: 326 DS 327
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 250 APLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQT 309
PL L PPKS +++ L+ D L ++ +G + + K + D +T
Sbjct: 151 GPLPIHELPEDDEPPKSTSN----LYIRGLSDNCTDEDLRKMCEKYGTINSTKSILDKKT 206
Query: 310 YKCKGFGFVCMTNYDEAVFAIQSL 333
+CKG+GFV + +A+ A++SL
Sbjct: 207 GQCKGYGFVDFSEEADALKALESL 230
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
E +NL ++ +P+ ++++L+ L S G + S +++R+ + S G GFV E+ E+
Sbjct: 245 EDPTNLYLSNLPKYYSEKDLEKLLSPYGRIISTRVLREPS-GYSRGVGFVRLDSRENCEK 303
Query: 84 AIIELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDL 129
A LN ++++ S KR ++ ++ MT D
Sbjct: 304 AREALNNTIFPGTDLELNIKFADSGNYKRKSIRLTYTETTMTDIDF 349
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 159/380 (41%), Gaps = 85/380 (22%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L + VP+ M +E+++ +F G V+ +IRDK T FV +A+ AI L
Sbjct: 89 LFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIRSL 148
Query: 89 NG---LKLQNKSIKVSYARPSSEAIK------------RANLYVSGLPKHMTQEDLENLF 133
N L Q S++V YA S E +K +A L++ LPK +++E ++ +F
Sbjct: 149 NNQRTLDPQLGSLQVKYA--SGEIMKLGFPQNIESGVDQAKLFIGSLPKSISEESVKEMF 206
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
PYG++ I+ D + KG FV+F +A +A+ LNG
Sbjct: 207 SPYGSVEEVFIMKDNSTG---------------LGKGCSFVKFAYKEQALYAINSLNGKK 251
Query: 194 P-EGASEPITVKFANSPAGRAKALAANLNAQAAAM------------------------- 227
EG + P+ V+FA + + + N+ + +
Sbjct: 252 TLEGCARPVEVRFAEPKSAKQAQIPMNMQSMQNSAHGISSQPHVTSPNNINFGNNFGVNN 311
Query: 228 ---RHFAAAMRHF---GNPLHHSARFK-------------FAPLTADL--LNNSMLPPKS 266
R A ++ G P +++ + F T ++ L++S PP
Sbjct: 312 NYPRQVGAWKEYYSGEGRPYYYNEQTNTTQWEMPKEFETLFMGTTHNMHNLSDSSGPP-- 369
Query: 267 LHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEA 326
G +F++++ E L Q F PFG + + ++ + T + +GF FV N + A
Sbjct: 370 ----GANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESA 425
Query: 327 VFAIQSLNGYALGDRLLQVS 346
AI +NG+ ++ L+V+
Sbjct: 426 AAAISQMNGFMALNKKLKVT 445
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + +VP Q +L FS GE+ S ++ +K+T ++ G+ FV+Y E A AI
Sbjct: 371 ANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAAAAIS 430
Query: 87 ELNGLKLQNKSIKVS 101
++NG NK +KV+
Sbjct: 431 QMNGFMALNKKLKVT 445
>gi|281365675|ref|NP_001163350.1| alan shepard, isoform E [Drosophila melanogaster]
gi|442630334|ref|NP_001261438.1| alan shepard, isoform G [Drosophila melanogaster]
gi|20151883|gb|AAM11301.1| RH63980p [Drosophila melanogaster]
gi|272455055|gb|ACZ94622.1| alan shepard, isoform E [Drosophila melanogaster]
gi|440215326|gb|AGB94133.1| alan shepard, isoform G [Drosophila melanogaster]
Length = 379
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + + Q T ++L ++ + G + S K I DKTT + GYGFV++ + AE A+
Sbjct: 21 TNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVK 80
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR----ANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
L G +Q + KV AI++ NLY++ LP H + DLE + YG ++++
Sbjct: 81 GLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVST 140
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
RIL D+ + SKG+GF R + E +Q NG GA +P+
Sbjct: 141 RILRDQQMN----------------SKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLL 184
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAA 232
VKFA+ + K L + A A R +A
Sbjct: 185 VKFADG-GPKKKNLFKTPDPNARAWRDVSA 213
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 110 IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISK 169
+ + NLY+ GL + T +DL N+ YGTII+++ + DK ++ K
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNK---------------CK 62
Query: 170 GIGFVRFNQHIEAEHAMQELNG 191
G GFV F Q AE A++ L G
Sbjct: 63 GYGFVDFEQPAFAECAVKGLQG 84
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ L T D L + +G + + K + D T KCKG+GFV A A++ L
Sbjct: 23 LYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGL 82
Query: 334 NGYALGDRLLQVS-FKTHKP 352
G + ++ +V + H+P
Sbjct: 83 QGKGVQAQMAKVGIWVLHRP 102
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 70/314 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 56 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEK 115
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 116 ALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 175
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A A++ +NG +
Sbjct: 176 CKVAQDENGN----------------SKGYGFVHYETDEAASQAIKHVNGML-------- 211
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + H H S KF + A+ N
Sbjct: 212 ------------------LNEKKVYVGH------HIPKKDRQS---KFEEMKANFTN--- 241
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N+AP+ ++ +LF FG V + + RD Q K +GFGFV T
Sbjct: 242 ------------VYVKNIAPDVTEDDFRELFEKFGDVTSSSLARD-QEGKSRGFGFVNFT 288
Query: 322 NYDEAVFAIQSLNG 335
++ A A+ LNG
Sbjct: 289 THESASKAVDDLNG 302
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 19/137 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +T+++ + LF G+V S L RD+ +S G+GFVN+ E A +A+
Sbjct: 240 TNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQE-GKSRGFGFVNFTTHESASKAVD 298
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIK--------RANLYVSGLPKHMTQED 128
+LNG + + V A R S EA + NLY+ L + +
Sbjct: 299 DLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDK 358
Query: 129 LENLFRPYGTIITSRIL 145
L +F +G I +++++
Sbjct: 359 LRQMFSEFGPITSAKVM 375
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + A++
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKALEE 119
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 120 LNYTLIKGRPCRIMWSQRDP 139
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
S+L V + +T+ L +FS +G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 74 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 133
Query: 87 ELNGLKLQNKSIKV--SYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ S+ P N+++ L + + L + F +G+I++S++
Sbjct: 134 TMNFEMIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 193
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ ++ S+G GFV F H A+ A+ +NG +
Sbjct: 194 VYNEHG-----------------SRGFGFVHFETHEAAQKAINTMNGML----------- 225
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + + + A L A L +
Sbjct: 226 ---------------LNDRKVFVGHFKSRQK------------REAELGARALGFT---- 254
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
++V NL + ++ L LF FG +Q+VKV+RD + +GFGFV ++
Sbjct: 255 --------NVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDSNG-QSRGFGFVNFEKHE 305
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + +LL V
Sbjct: 306 EAQKAVDHMNGKEVRGQLLYV 326
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + S K++ ++ S G+GFV++ E A++AI
Sbjct: 163 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINT 220
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + A + A+ N+YV L M ++ L++LF +G +
Sbjct: 221 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNVYVKNLHMDMDEQGLQDLFSQFGKM 280
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ +++ D S+G GFV F +H EA+ A+ +NG G
Sbjct: 281 QSVKVMRDSNGQ----------------SRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLL 324
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ A Q+ R F + N R++
Sbjct: 325 YV---------GRAQKRAER---QSELKRRFEQVKQERQN------RYQ----------- 355
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D L ++F +G + + KV+ + + KGFGFVC
Sbjct: 356 -----------GVNLYVKNLDDSINDERLKEVFSAYGVITSAKVMTE--SSHSKGFGFVC 402
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 403 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 434
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 39/211 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + M ++ LQ LFS G+++S K++RD + QS G+GFVN+ + E+A++A+
Sbjct: 254 TNVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVD 312
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG +++ + + V A+ +E +KR NLYV L + E
Sbjct: 313 HMNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSINDER 372
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ +F YG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 373 LKEVFSAYGVITSAKVMTESSH-----------------SKGFGFVCFSSPEEATKAVTE 415
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+NG I ++P+ V A R KA+ N
Sbjct: 416 MNGRIV--GTKPLYVALAQRKEER-KAILTN 443
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 72/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 68 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 127
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 128 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 186
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 187 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV-- 227
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
GR K N + A +R A+ F N
Sbjct: 228 -------GRFK----NRKDREAELRSKAS---EFTN------------------------ 249
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
I++ N + +D L +F +G +VKV+ D + K KGFGFV ++
Sbjct: 250 ----------IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSH 298
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+ A A++ +NG + +L+ V
Sbjct: 299 EAAKKAVEEMNGRDINGQLIFV 320
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 68/328 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G++ S K++ D ++ GY FV++ A+RAI E
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSK--GYAFVHFQNQSAADRAIEE 214
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L+ K+ K A S+A + N+Y+ M E L+++F YG
Sbjct: 215 MNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKT 274
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG SKG GFV F+ H A+ A++E+NG G +
Sbjct: 275 LSVKVMTDS----------SGK------SKGFGFVSFDSHEAAKKAVEEMNGRDING--Q 316
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + QA + F R
Sbjct: 317 LIFV-------GRAQK---KVERQAELKQMFEQLKRE----------------------- 343
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ G +++ NL +D L F FG++ VKV+++ + KGFG +C
Sbjct: 344 -----RICGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG--QSKGFGLIC 396
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSF 347
++ ++A A+ +NG LG + L ++
Sbjct: 397 FSSPEDATKAMTEMNGRILGSKPLSIAL 424
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 248 TNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 306
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 307 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKNLDDTIDDEK 366
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I SR+ K+ E + SKG G + F+ +A AM E
Sbjct: 367 LRNEFSSFGSI--SRV---KVMQEEGQ------------SKGFGLICFSSPEDATKAMTE 409
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 410 MNGRIL--GSKPLSIALA 425
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 349 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 406
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 407 MTEMNGRILGSKPLSIALAQ 426
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 334 NGYAL-GDRLLQVSFKTHK 351
NG L G ++ FK K
Sbjct: 216 NGKLLKGCKVFVGRFKNRK 234
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L+ LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L +LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A++A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQNAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + L A + +
Sbjct: 163 ---------------LNDRKVFVGHFK------------SRREREVELGARAMEFT---- 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 192 --------NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGH-SRGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ ++NG + RLL V
Sbjct: 243 EAQKAVVNMNGREVSGRLLYV 263
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK++ D+ S G+GFV++ E A+ AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQNAIST 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV F +H EA+ A+ +NG E +
Sbjct: 218 LSVKVMRDDSGH----------------SRGFGFVNFEKHEEAQKAVVNMNGR--EVSGR 259
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V GRA+ N + +F + D L
Sbjct: 260 LLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQDRLTR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD + S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDS-GHSRGFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR G P+
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRALGGPI 396
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 165/378 (43%), Gaps = 78/378 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 10 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 69
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 70 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 128
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 129 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGC-KVFVG 170
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAM---------RHFGNPL------------- 241
+F N A+ + +++F M +G L
Sbjct: 171 RFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK 230
Query: 242 ---------HHSARFKFAPLTADLLNNSM----------------------LPPKSLHG- 269
H +A+ + +N + L + + G
Sbjct: 231 GFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGC 290
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
G +++ NL +D L F FG++ VKV+++ + KGFG +C ++ ++A A
Sbjct: 291 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKA 348
Query: 330 IQSLNGYALGDRLLQVSF 347
+ +NG LG + L ++
Sbjct: 349 MTEMNGRILGSKPLSIAL 366
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 190 TNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 248
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 249 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 308
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ E Q SKG G + F+ +A AM E
Sbjct: 309 LRNEFSSFGSISRVKVM----------------QEEGQ-SKGFGLICFSSPEDATKAMTE 351
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 352 MNGRIL--GSKPLSIALA 367
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 291 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 348
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 349 MTEMNGRILGSKPLSIALAQ 368
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 334 NGYAL-GDRLLQVSFKTHKP 352
NG L G ++ FK K
Sbjct: 158 NGKLLKGCKVFVGRFKNRKD 177
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 142/335 (42%), Gaps = 50/335 (14%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTA------QSLGYGFVNYYRTEDAE 82
L V + +T++ L+ +F + G V+S K+I DKT + + YGFV Y AE
Sbjct: 88 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYDDPGAAE 147
Query: 83 RAIIELNGLKLQNKSIKVSYARPSSEAIKRA-----NLYVSGLPKHMTQEDLENLFRPYG 137
R + LNG ++ N I+V++A S+ K +++V L + E L F +G
Sbjct: 148 RGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFG 207
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+ +R++ D S+G GFV F +AE A+ ++G
Sbjct: 208 PVSEARVMWDMKTGR---------------SRGYGFVAFRDRADAERALSSMDGEW--LG 250
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
S I +AN + +++ Q A FG+ HH T +
Sbjct: 251 SRAIRCNWAN------QKGQPSISQQQAMASMGMTPTTPFGH--HHFP-------TQGVQ 295
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ M+ ++ C +V NL P T + L LF FG V + D +GF F
Sbjct: 296 SYDMVVAQTPQWQTTC-YVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAF 348
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
+ M ++ A AI LNGY + R L+ S+ +P
Sbjct: 349 IKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRP 383
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 75/252 (29%)
Query: 18 YQSD--VNEQNSN---LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
YQS+ E SN + V + + E L FS+ G V +++ D T +S GYGF
Sbjct: 169 YQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGF 228
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYA----RPS---------------------- 106
V + DAERA+ ++G L +++I+ ++A +PS
Sbjct: 229 VAFRDRADAERALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHH 288
Query: 107 --SEAIKRANL------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
++ ++ ++ YV L + +Q DL LF+ +G + +R D
Sbjct: 289 FPTQGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD----- 343
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG--------TIPEGASEPITVK 204
+G F++ + H A A+ +LNG G P T +
Sbjct: 344 ----------------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQ 387
Query: 205 FAN-SPAGRAKA 215
F SPAG A
Sbjct: 388 FEGYSPAGPNSA 399
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+ E D VL Q F FG V +V+ D +T + +G+GFV + +A A+ S+
Sbjct: 185 IFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSM 244
Query: 334 NGYALGDRLLQVSFKTHKPLPPV 356
+G LG R ++ ++ K P +
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSI 267
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G + SCK+ D+ S G+GFV++ E A++AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E A++ N+YV LP + ++ L++LF +G +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S + R F GFV F +H EA+ A+ +NG +
Sbjct: 218 LSVKVMRDN--SGHSRCF--------------GFVNFEKHEEAQKAVVHMNG-------K 254
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
++ + AGRA+ N + +F + D L
Sbjct: 255 EVSGRLLY--AGRAQKRVERQN----------------------ELKRRFEQMKQDRLRR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG +G + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 70/319 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N L+ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
CD+ S+G GFV F H A+ A+ +NG +
Sbjct: 131 ACDEHG-----------------SRGFGFVHFETHEAAQQAINTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + A L A L +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREAELGARALEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + + FGFV ++
Sbjct: 193 ---------IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLL 343
EA A+ +NG + RLL
Sbjct: 243 EAQKAVVHMNGKEVSGRLL 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V +P + ++ LQ LFS G++ S K++RD + S +GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNK---------------SIKVSYARPSSEAIKR---ANLYVSGLPKHMTQED 128
+NG ++ + +K + + + ++R NLYV L + +
Sbjct: 250 HMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A R KA+ N Q + MR NPL
Sbjct: 353 MNGRIV--GTKPLYVALAQRKEER-KAILTNQYMQR------LSTMRTLSNPL 396
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL V + ++ ++L+ FS G + S K++ + S G+GFV + E+A +A
Sbjct: 292 QGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 85 IIELNGLKLQNKSIKVSYARPSSE 108
+ E+NG + K + V+ A+ E
Sbjct: 350 VTEMNGRIVGTKPLYVALAQRKEE 373
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 70/314 (22%)
Query: 25 QNS-NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
QNS +L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 56 QNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEK 115
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ ELN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 116 ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 175
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A A++ +NG +
Sbjct: 176 CKVAQDENGN----------------SKGYGFVHYETDEAAAQAIKHVNGML-------- 211
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + + H S KF + A+ N
Sbjct: 212 ------------------LNEKKVYVGY------HIPKKDRQS---KFEEMKANFTN--- 241
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N+ P+ D+ +LF FG V + + RD Q K +GFGFV T
Sbjct: 242 ------------VYVKNIGPDVTDDEFRELFEKFGDVTSSSLARD-QEGKPRGFGFVNFT 288
Query: 322 NYDEAVFAIQSLNG 335
++ A A++ LNG
Sbjct: 289 THEAAFKAVEDLNG 302
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 47/260 (18%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
Y+ + R + ++ +N+ V + +T +E + LF G+V S L RD+ +
Sbjct: 221 YHIPKKDRQSKFEEMKANFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQ-EGKP 279
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYA----------RPSSEAIK------ 111
G+GFVN+ E A +A+ +LNG + + + V A R S EA +
Sbjct: 280 RGFGFVNFTTHEAAFKAVEDLNGKDFRGQELYVGRAQKKHEREEELRKSYEAARLEKANK 339
Query: 112 --RANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCD--KMASENVRSFVSGTPEIPQI 167
NLY+ L + E L +F +G I +++++ D + E V+ +
Sbjct: 340 YQGVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDTPQEGEEEVKDQEKDKENQKEA 399
Query: 168 ------------------------SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
SKG GFV F+ +A A+ E+N + ++P+ V
Sbjct: 400 ENEAESAESAEKKAEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMIN--NKPLYV 457
Query: 204 KFANSPAGRAKALAANLNAQ 223
A R L A++ A+
Sbjct: 458 ALAQRKDVRKSQLEASIQAR 477
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 149 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHV 207
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L ++ + V + K
Sbjct: 208 NGMLLNEKKVYVGYHIPK 225
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 273 CIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQS 332
++V L P + +L++LF GAV +++V RD T + G+ +V + + A++
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 333 LNGYALGDRLLQVSFKTHKP 352
LN + R ++ + P
Sbjct: 120 LNYTLIKGRPCRIMWSQRDP 139
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 45/330 (13%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKT-TAQSLGYGFVNYYRTEDAERAIIE 87
L V + +T++ L+ +F + G V+S K+I DK ++ YGFV + AERA+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 88 LNGLKLQNKSIKVSYARPSSEAIKRA-----NLYVSGLPKHMTQEDLENLFRPYGTIITS 142
LNG ++ I+V++A S+ A K +++V L + E L F +G++ +
Sbjct: 153 LNGRRIHQSEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEA 212
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
R++ D S+G GFV F + +AE A+ ++G S I
Sbjct: 213 RVMWDMKTGR---------------SRGYGFVAFRERADAEKALNAMDGEWL--GSRAIR 255
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSML 262
+AN + + + A AA H P H + M+
Sbjct: 256 CNWANQ---KGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYD------------MV 300
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
++ C +V NL P T N L LF FG V ++ D +GF F+ M
Sbjct: 301 VQQTPQWQTTC-YVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKMDT 353
Query: 323 YDEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
++ A AI LNGY + R L+ S+ +P
Sbjct: 354 HENAAMAICQLNGYNVNGRPLKCSWGKDRP 383
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 66/219 (30%)
Query: 18 YQSD-VNEQNSN----LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
YQS+ N+++++ + V + + E L FS+ G V +++ D T +S GYGF
Sbjct: 169 YQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGF 228
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYA----RPS---------------------- 106
V + DAE+A+ ++G L +++I+ ++A +PS
Sbjct: 229 VAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHH 288
Query: 107 --SEAIKRANL------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
+ ++ ++ YV L + TQ DL LF +G ++ +R+ D
Sbjct: 289 FPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD----- 343
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+G F++ + H A A+ +LNG
Sbjct: 344 ----------------RGFAFIKMDTHENAAMAICQLNG 366
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+ E D +L Q F FG+V +V+ D +T + +G+GFV +A A+ ++
Sbjct: 185 IFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAM 244
Query: 334 NGYALGDRLLQVSFKTHKPLPPV 356
+G LG R ++ ++ K P +
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSI 267
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 104 RPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPE 163
R + E KRA LYV GL +T++ L+ +F G + + +I+ DK +
Sbjct: 83 RAAPEPNKRA-LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN------------ 129
Query: 164 IPQISKG--IGFVRFNQHIEAEHAMQELNG 191
SKG GFV F+ AE AMQ LNG
Sbjct: 130 ----SKGYNYGFVEFDDPGAAERAMQTLNG 155
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 165/378 (43%), Gaps = 78/378 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 10 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 69
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 70 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 128
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 129 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGC-KVFVG 170
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAM---------RHFGNPL------------- 241
+F N A+ + +++F M +G L
Sbjct: 171 RFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK 230
Query: 242 ---------HHSARFKFAPLTADLLNNSM----------------------LPPKSLHG- 269
H +A+ + +N + L + + G
Sbjct: 231 GFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGC 290
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
G +++ NL +D L F FG++ VKV+++ + KGFG +C ++ ++A A
Sbjct: 291 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKA 348
Query: 330 IQSLNGYALGDRLLQVSF 347
+ +NG LG + L ++
Sbjct: 349 MTEMNGRILGSKPLSIAL 366
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 190 TNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 248
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 249 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 308
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ E Q SKG G + F+ +A AM E
Sbjct: 309 LRNEFSSFGSISRVKVM----------------QEEGQ-SKGFGLICFSSPEDATKAMTE 351
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 352 MNGRIL--GSKPLSIALA 367
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 291 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 348
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 349 MTEMNGRILGSKPLSIALAQ 368
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 334 NGYAL-GDRLLQVSFKTHKP 352
NG L G ++ FK K
Sbjct: 158 NGKLLKGCKVFVGRFKNRKD 177
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 73/302 (24%)
Query: 37 TMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNK 96
+ T+ +L LFS++G V S ++ RD T +SLGY +VN+ + DA RAI LN + K
Sbjct: 42 SCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDALNFQVVNGK 101
Query: 97 SIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV 154
I++ Y++ P+ N+++ L K + + L + F +G I+++++ D
Sbjct: 102 PIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFAQFGNIVSAKVATDLQGQ--- 158
Query: 155 RSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAK 214
SKG GFV+F+ A+ A++++NG +
Sbjct: 159 -------------SKGYGFVQFDTEEGAQSAIEKVNGML--------------------- 184
Query: 215 ALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCI 274
LN + + F G P NN +
Sbjct: 185 -----LNDKQVYVGPFQKRNERGGGPT--------------TFNN--------------V 211
Query: 275 FVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLN 334
+V NL + L ++F FGA+ +V V++D + K KGFGFVC + + A +++ L+
Sbjct: 212 YVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEG-KSKGFGFVCYEDAEAAGKSVEELD 270
Query: 335 GY 336
GY
Sbjct: 271 GY 272
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 134/334 (40%), Gaps = 71/334 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + + L F+ G + S K+ D QS GYGFV + E A+ AI
Sbjct: 120 GNIFIKNLDKEIDNKALYDTFAQFGNIVSAKVATD-LQGQSKGYGFVQFDTEEGAQSAIE 178
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA-------NLYVSGLPKHMTQEDLENLFRPYGTI 139
++NG+ L +K + Y P + +R N+YV L + +T+E L +F +G +
Sbjct: 179 KVNGMLLNDKQV---YVGPFQKRNERGGGPTTFNNVYVKNLHESVTEEKLREVFEKFGAL 235
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG--TIPEGA 197
+ ++ D SKG GFV + A +++EL+G I + A
Sbjct: 236 TSVVVMKDAEGK----------------SKGFGFVCYEDAEAAGKSVEELDGYDKIEDKA 279
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
V A + R L A +A+ R M
Sbjct: 280 ---WVVCRAQKKSEREAELKAKFDAE---RRERMEKM----------------------- 310
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+G +++ NL +D L +LF FG + + +V+RD +G F
Sbjct: 311 ------------AGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRD-TAGASRGSAF 357
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V ++ DEA A+ +NG G + L V+ K
Sbjct: 358 VAFSSADEATRAVTEMNGKMAGQKPLYVALAQRK 391
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + +++T+E+L+ +F G + S +++D +S G+GFV Y E A +++
Sbjct: 209 NNVYVKNLHESVTEEKLREVFEKFGALTSVVVMKD-AEGKSKGFGFVCYEDAEAAGKSVE 267
Query: 87 ELNGL-KLQNKSIKVSYARPSSE----------AIKR--------ANLYVSGLPKHMTQE 127
EL+G K+++K+ V A+ SE A +R ANLY+ L +
Sbjct: 268 ELDGYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIKNLEDTVDDA 327
Query: 128 DLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQ 187
L LF +GTI + R++ D + S+G FV F+ EA A+
Sbjct: 328 KLRELFAEFGTITSCRVMRDTAGA----------------SRGSAFVAFSSADEATRAVT 371
Query: 188 ELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFG 238
E+NG + +P+ V A R + L AQ A + A M + G
Sbjct: 372 EMNGKM--AGQKPLYVALAQ----RKEDRRLRLQAQFAQRQVAAGGMPNMG 416
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 69/328 (21%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 110
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 111 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCK 170
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 171 VAQDEFGN----------------SKGYGFVHYETAEAANNAIKHVNGML---------- 204
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 205 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 234
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ N+ E D ++F FG + + + RD Q K +GFGFV + +
Sbjct: 235 ----------VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTH 283
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHK 351
D A A+ +N + + L V K
Sbjct: 284 DSAQAAVDEMNDKEIKGQKLYVGRAQKK 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + Q +T EE + +F GE+ S L RD+ +S G+GFVN+ + A+ A+
Sbjct: 233 TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVD 291
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------IKRA------NLYVSGLPKHMTQED 128
E+N +++ + + V A+ E +++A NLYV L + E
Sbjct: 292 EMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 351
Query: 129 LENLFRPYGTIITSRILCDKMASENV-----------------------------RSFVS 159
L LF P+GTI +++++ D + +
Sbjct: 352 LRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEEAKK 411
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
+I SKG GFV F+ EA A+ E+N + G +P+ V A R L A+
Sbjct: 412 TEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG--KPLYVALAQRKDVRRSQLEAS 469
Query: 220 LNAQ 223
+ A+
Sbjct: 470 IQAR 473
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 165/378 (43%), Gaps = 78/378 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T++ L FS+VG V S ++ RD+ T +SLGY +VN+ + DA++A+
Sbjct: 68 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 127
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+N ++ KSI++ +++ + ++R+ N+++ L K + + L F +G I++S+
Sbjct: 128 TMNFDIIKGKSIRLMWSQRDA-YLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSK 186
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D Q SKG FV F A+ A++E+NG + +G +
Sbjct: 187 VMSD-----------------DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGC-KVFVG 228
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAM---------RHFGNPL------------- 241
+F N A+ + +++F M +G L
Sbjct: 229 RFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSK 288
Query: 242 ---------HHSARFKFAPLTADLLNNSM----------------------LPPKSLHG- 269
H +A+ + +N + L + + G
Sbjct: 289 GFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGC 348
Query: 270 SGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFA 329
G +++ NL +D L F FG++ VKV+++ + KGFG +C ++ ++A A
Sbjct: 349 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKA 406
Query: 330 IQSLNGYALGDRLLQVSF 347
+ +NG LG + L ++
Sbjct: 407 MTEMNGRILGSKPLSIAL 424
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 248 TNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 306
Query: 87 ELNGLKLQNKSIKVSYARPSS----------EAIKR--------ANLYVSGLPKHMTQED 128
E+NG + + I V A+ E +KR LY+ L + E
Sbjct: 307 EMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEK 366
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L N F +G+I +++ E Q SKG G + F+ +A AM E
Sbjct: 367 LRNEFSSFGSISRVKVM----------------QEEGQ-SKGFGLICFSSPEDATKAMTE 409
Query: 189 LNGTIPEGASEPITVKFA 206
+NG I S+P+++ A
Sbjct: 410 MNGRIL--GSKPLSIALA 425
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q L + + T+ E+L++ FSS G + K+++++ QS G+G + + EDA +A
Sbjct: 349 QGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKA 406
Query: 85 IIELNGLKLQNKSIKVSYAR 104
+ E+NG L +K + ++ A+
Sbjct: 407 MTEMNGRILGSKPLSIALAQ 426
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F FG + + KV+ D Q KG+ FV N A AI+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 334 NGYAL-GDRLLQVSFKTHK 351
NG L G ++ FK K
Sbjct: 216 NGKLLKGCKVFVGRFKNRK 234
>gi|268566587|ref|XP_002639761.1| C. briggsae CBR-PAB-1 protein [Caenorhabditis briggsae]
Length = 651
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 65/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + + + FS G + SCK+ D+ + S GYGFV++ E A+ AI
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEEGS-SKGYGFVHFETEEAAQNAIQ 178
Query: 87 ELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
++NG+ L K + V +P ++ A K N+YV +H ++ LE LF YGT
Sbjct: 179 KVNGMLLAGKKVFVGKFQPRAQRNRELGETAKKFTNVYVKNFGEHYNKDTLEKLFAKYGT 238
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I + CD M SE SKG GFV F + EAE A+Q LN + EG+
Sbjct: 239 ITS----CDVMTSEGK-------------SKGFGFVAFAEPEEAEAAVQALNDSPVEGSD 281
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V AQ + RH +H + + +++
Sbjct: 282 LKLHV----------------CRAQKKSERHAELKKKHEQHKVERMQKYQ---------- 315
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F FG + + KV+ D + + KGFGFV
Sbjct: 316 ------------GVNLYVKNLDESVDDEALKKQFESFGNITSAKVMTD-ENGRSKGFGFV 362
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C +EA A+ +N + + L V+ K
Sbjct: 363 CFEKPEEATTAVSEMNSKMVCSKPLYVALAQRK 395
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 70/274 (25%)
Query: 47 FSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR-- 104
FS+ G V S ++ RD T SLGY +VN+ + DAERA+ +N L K +++ +++
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRD 111
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
P+ N+++ L K + + + + F +G I++ ++ D+ S
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEEGS------------- 158
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
SKG GFV F A++A+Q++NG + G K +A
Sbjct: 159 ---SKGYGFVHFETEEAAQNAIQKVNGMLLAG----------------KKVFVGKFQPRA 199
Query: 225 AAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETE 284
R + F N ++V N
Sbjct: 200 QRNRELGETAKKFTN----------------------------------VYVKNFGEHYN 225
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
+ L +LF +G + + V+ K KGFGFV
Sbjct: 226 KDTLEKLFAKYGTITSCDVMTS--EGKSKGFGFV 257
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 40/222 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ L+ LF+ G + SC ++ + +S G+GFV + E+AE A+
Sbjct: 213 TNVYVKNFGEHYNKDTLEKLFAKYGTITSCDVM--TSEGKSKGFGFVAFAEPEEAEAAVQ 270
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRA--------------------NLYVSGLPKHMTQ 126
LN ++ +K+ R ++ + A NLYV L + +
Sbjct: 271 ALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDD 330
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
E L+ F +G I +++++ D EN R SKG GFV F + EA A+
Sbjct: 331 EALKKQFESFGNITSAKVMTD----ENGR------------SKGFGFVCFEKPEEATTAV 374
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
E+N + S+P+ V A R LA+ + A+MR
Sbjct: 375 SEMNSKMV--CSKPLYVALAQRKEDRRAQLASQYMQRLASMR 414
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ V + +++ + L S+ G + SC ++ D+ ++ GYGFV++ E AERAI +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAIKK 157
Query: 88 LNGLKL--------QNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L Q KS K A + A + N+Y+ + M E L++LF +G
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D+ SG SKG GFV F +H +A+ A+ E+NG G
Sbjct: 218 LSVELMTDE----------SGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQ- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L + F + D +
Sbjct: 261 -IYVGRAQKKVERQTEL-----------------------------KRTFEQMKQDRITR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+ ++V NL +D L + F PFG + + KV+ + + KGFGFVC
Sbjct: 291 YQV---------VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T+ S Y +VN+ T+DAE A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ K +++ +++ PS N++V L K + + L + +G I++ +
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F H AE A++++NG + G
Sbjct: 131 VCDENG-----------------SKGYGFVHFETHEAAERAIKKMNGMLLNG-------- 165
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K ++ A + F N
Sbjct: 166 --------RKVFVGQFKSRKEREAELGARAKEFPN------------------------- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L LFG FG +V+++ D ++ K KGFGFV ++
Sbjct: 193 ---------VYIKNFGEDMDDERLKDLFGKFGPALSVELMTD-ESGKSKGFGFVSFERHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
+A A+ +NG L + + V
Sbjct: 243 DAQKAVDEMNGKELNGKQIYV 263
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + M E L+ LF G S +L+ D++ +S G+GFV++ R EDA++A+ E
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVELMTDES-GKSKGFGFVSFERHEDAQKAVDE 250
Query: 88 LNGLKLQNKSIKVSYARPSSE---AIKRA---------------NLYVSGLPKHMTQEDL 129
+NG +L K I V A+ E +KR NLYV L + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERL 310
Query: 130 ENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQEL 189
F P+GTI +++++ E R SKG GFV F+ EA A+ E+
Sbjct: 311 RKAFSPFGTITSAKVMM-----EGGR------------SKGFGFVCFSSPEEATKAVTEM 353
Query: 190 NGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
NG I A++P+ V A R L + A++R
Sbjct: 354 NGRI--VATKPLYVALAQRKEERQAYLTNEYMQRMASVR 390
>gi|189240575|ref|XP_974237.2| PREDICTED: similar to single-stranded DNA-binding protein mssp-1
[Tribolium castaneum]
Length = 524
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + + T T ++L ++ G + S K I DKTT + GYGFV++ AE A+
Sbjct: 179 TNLYIRGLNPTTTDKDLVNMCQQFGTIISTKAILDKTTNKCKGYGFVDFESPSAAEGAVK 238
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
L +Q + K P+ NLY++ LP H + DL+NL YG +I++RIL
Sbjct: 239 ALTANNIQAQMAKQQEQDPT-------NLYIANLPSHFKESDLDNLLSKYGQVISTRILR 291
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D M ISKG+GF R + E + NG G EP+ VKFA
Sbjct: 292 DSMG----------------ISKGVGFARMENKDKCEQIITIFNGNTLTGCKEPLLVKFA 335
Query: 207 N 207
+
Sbjct: 336 D 336
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ L P T D L + FG + + K + D T KCKG+GFV + A A+++L
Sbjct: 181 LYIRGLNPTTTDKDLVNMCQQFGTIISTKAILDKTTNKCKGYGFVDFESPSAAEGAVKAL 240
>gi|341900148|gb|EGT56083.1| hypothetical protein CAEBREN_04295 [Caenorhabditis brenneri]
Length = 649
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 143/333 (42%), Gaps = 65/333 (19%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + + + FS G + SCK+ D+ + S GYGFV++ E A+ AI
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEEGS-SKGYGFVHFETEEAAQNAIQ 178
Query: 87 ELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
++NG+ L K + V +P ++ A K N+YV H +E LE LF YGT
Sbjct: 179 KVNGMLLAGKKVFVGKFQPRAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGT 238
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I + CD M S+ SKG GFV F + EAE A+Q LN + EG+
Sbjct: 239 ITS----CDVMTSDGK-------------SKGFGFVAFAEPEEAEAAVQALNDSPVEGSD 281
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V AQ + RH +H + + +++
Sbjct: 282 LKLHV----------------CRAQKKSERHAELKKKHEQHKVERMQKYQ---------- 315
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F FG + + KV+ D + + KGFGFV
Sbjct: 316 ------------GVNLYVKNLDESVDDEALKKQFESFGNITSAKVMTD-ENGRSKGFGFV 362
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
C +EA A+ +N + + L V+ K
Sbjct: 363 CFEKPEEATTAVTEMNSKMVCSKPLYVALAQRK 395
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 106/274 (38%), Gaps = 70/274 (25%)
Query: 47 FSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYAR-- 104
FS+ G V S ++ RD T SLGY +VN+ + DAERA+ +N L K +++ +++
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRD 111
Query: 105 PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEI 164
P+ N+++ L K + + + + F +G I++ ++ D+ S
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEEGS------------- 158
Query: 165 PQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQA 224
SKG GFV F A++A+Q++NG + G K +A
Sbjct: 159 ---SKGYGFVHFETEEAAQNAIQKVNGMLLAG----------------KKVFVGKFQPRA 199
Query: 225 AAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIFVYNLAPETE 284
R + + N ++V N
Sbjct: 200 QRNRELGETAKKYTN----------------------------------VYVKNFGDHYN 225
Query: 285 DNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
L +LF +G + + V+ K KGFGFV
Sbjct: 226 KESLEKLFAKYGTITSCDVMTS--DGKSKGFGFV 257
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 12 QSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYG 71
++ R+ + ++ +N+ V +E L+ LF+ G + SC ++ + +S G+G
Sbjct: 198 RAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTITSCDVM--TSDGKSKGFG 255
Query: 72 FVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSEAIKRA------------------ 113
FV + E+AE A+ LN ++ +K+ R ++ + A
Sbjct: 256 FVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQ 315
Query: 114 --NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGI 171
NLYV L + + E L+ F +G I +++++ D EN R SKG
Sbjct: 316 GVNLYVKNLDESVDDEALKKQFESFGNITSAKVMTD----ENGR------------SKGF 359
Query: 172 GFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
GFV F + EA A+ E+N + S+P+ V A R LA+ + A+MR
Sbjct: 360 GFVCFEKPEEATTAVTEMNSKMV--CSKPLYVALAQRKEDRRAQLASQYMQRLASMR 414
>gi|270011336|gb|EFA07784.1| hypothetical protein TcasGA2_TC005341 [Tribolium castaneum]
Length = 501
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+NL + + T T ++L ++ G + S K I DKTT + GYGFV++ AE A+
Sbjct: 162 TNLYIRGLNPTTTDKDLVNMCQQFGTIISTKAILDKTTNKCKGYGFVDFESPSAAEGAVK 221
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILC 146
L +Q + K P+ NLY++ LP H + DL+NL YG +I++RIL
Sbjct: 222 ALTANNIQAQMAKQQEQDPT-------NLYIANLPSHFKESDLDNLLSKYGQVISTRILR 274
Query: 147 DKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFA 206
D M ISKG+GF R + E + NG G EP+ VKFA
Sbjct: 275 DSMG----------------ISKGVGFARMENKDKCEQIITIFNGNTLTGCKEPLLVKFA 318
Query: 207 N 207
+
Sbjct: 319 D 319
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+++ L P T D L + FG + + K + D T KCKG+GFV + A A+++L
Sbjct: 164 LYIRGLNPTTTDKDLVNMCQQFGTIISTKAILDKTTNKCKGYGFVDFESPSAAEGAVKAL 223
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY T D ERA+
Sbjct: 47 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 106
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
+LN ++ K ++ +++ P+ + N+++ L + + L + F +G I++ +
Sbjct: 107 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCK 166
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D+ + SKG GFV + A +A++ +NG +
Sbjct: 167 VAQDEFGN----------------SKGYGFVHYETAEAANNAIKHVNGML---------- 200
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H H S KF + A+ N
Sbjct: 201 ----------------LNDKKVFVGH------HISKKDRQS---KFEEMKANFTN----- 230
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ NL E + Q+F FG + + + RD Q K +GFGFV + +
Sbjct: 231 ----------VYIKNLDQEISEEEFRQMFEKFGEITSATLSRD-QEGKSRGFGFVNYSTH 279
Query: 324 DEAVFAIQSLN 334
D A A+ +N
Sbjct: 280 DSAQAAVDEMN 290
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 64/254 (25%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + Q +++EE + +F GE+ S L RD+ +S G+GFVNY + A+ A+
Sbjct: 229 TNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQE-GKSRGFGFVNYSTHDSAQAAVD 287
Query: 87 ELNGLKLQNKSIKVSYARPSSEA------------IKRA------NLYVSGLPKHMTQED 128
E+N +++ + + V A+ E +++A NLYV L + E
Sbjct: 288 EMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 347
Query: 129 LENLFRPYGTIITSRIL---------------------------------------CDKM 149
L +F PYGTI +++++ D
Sbjct: 348 LREMFAPYGTITSAKVMRDTNIERTQTPDSDKEKKEESKEEKPEAAEKTEEAAKESGDDQ 407
Query: 150 ASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSP 209
EN +S ++ SKG GFV F+ EA A+ E+N + G +P+ V A
Sbjct: 408 DKENKKS----DKKVLGKSKGFGFVCFSSPDEASKAVTEMNQRMING--KPLYVALAQRK 461
Query: 210 AGRAKALAANLNAQ 223
R L A++ A+
Sbjct: 462 DVRRSQLEASIQAR 475
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+ +
Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 196
Query: 334 NGYALGDRLLQVSFKTHK 351
NG L D+ + V K
Sbjct: 197 NGMLLNDKKVFVGHHISK 214
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 139/370 (37%), Gaps = 102/370 (27%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A AI
Sbjct: 202 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEN-GNSKGYGFVHYETDEAAANAIK 260
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V Y P + + N+YV +P +T E+ LF YG
Sbjct: 261 HVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIPAEVTDEEFRELFAKYGD 320
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+ +S + S+G GFV F H A A++ELNG G
Sbjct: 321 VTSSSLARSDEGK----------------SRGFGFVNFTTHEAASKAVEELNGKDFRG-- 362
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L R + AA + N
Sbjct: 363 QELYVGRAQKKHEREEEL----------RRSYEAARQEKANKYQ---------------- 396
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDP----------- 307
G +++ NL + +D+ L Q+F +G + + KV+RD
Sbjct: 397 ------------GVNLYIKNLGDDVDDDKLRQMFSEYGPITSAKVMRDSVVESAAEDEKD 444
Query: 308 --------------------------QTYKCKGFGFVCMTNYDEAVFAIQSLNGYALGDR 341
+ K KGFGFVC +N D+A A+ +N + ++
Sbjct: 445 KENKKEDEEEKEGETAEKKAETKEKRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMIDNK 504
Query: 342 LLQVSFKTHK 351
L V+ K
Sbjct: 505 PLYVALAQRK 514
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 69/314 (21%)
Query: 24 EQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAER 83
+ +++L V + ++T+ L LFS +G V S ++ RD T +SLGY +VNY T D E+
Sbjct: 111 QSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEK 170
Query: 84 AIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIIT 141
A+ +LN ++ + ++ +++ P+ + N+++ L + + L + F +G I++
Sbjct: 171 ALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS 230
Query: 142 SRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPI 201
++ D+ + SKG GFV + A +A++ +NG +
Sbjct: 231 CKVAQDENGN----------------SKGYGFVHYETDEAAANAIKHVNGML-------- 266
Query: 202 TVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSM 261
LN + + + H S KF + A+ N
Sbjct: 267 ------------------LNEKKVYVGY------HIPKKDRQS---KFEEMKANFTN--- 296
Query: 262 LPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMT 321
++V N+ E D +LF +G V + + R + K +GFGFV T
Sbjct: 297 ------------VYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEG-KSRGFGFVNFT 343
Query: 322 NYDEAVFAIQSLNG 335
++ A A++ LNG
Sbjct: 344 THEAASKAVEELNG 357
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 8 YNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQS 67
Y+ + R + ++ +N+ V +P +T EE + LF+ G+V S L R +S
Sbjct: 276 YHIPKKDRQSKFEEMKANFTNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLAR-SDEGKS 334
Query: 68 LGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYA----------RPSSEAIKR----- 112
G+GFVN+ E A +A+ ELNG + + + V A R S EA ++
Sbjct: 335 RGFGFVNFTTHEAASKAVEELNGKDFRGQELYVGRAQKKHEREEELRRSYEAARQEKANK 394
Query: 113 ---ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENV--------------- 154
NLY+ L + + L +F YG I +++++ D +
Sbjct: 395 YQGVNLYIKNLGDDVDDDKLRQMFSEYGPITSAKVMRDSVVESAAEDEKDKENKKEDEEE 454
Query: 155 -----RSFVSGTPEIPQI--SKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFAN 207
+ T E ++ SKG GFV F+ +A A+ E+N + + ++P+ V A
Sbjct: 455 KEGETAEKKAETKEKRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMID--NKPLYVALAQ 512
Query: 208 SPAGRAKALAANLNAQAAAMRHFAAA 233
R L A++ A+ AAA
Sbjct: 513 RKDVRKSQLEASIQARNQLRMQQAAA 538
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 140/329 (42%), Gaps = 45/329 (13%)
Query: 29 LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIEL 88
L V + +T++ L+ +F + G V+S K+I DK + + L YGFV Y AERA+ L
Sbjct: 102 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMATL 160
Query: 89 NGLKLQNKSIKVSYARPSSEAIKRA-----NLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
NG ++ I+V++A S+ K +++V L + E L F +G++ +R
Sbjct: 161 NGRRVHQSEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 220
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
++ D S+G GFV F + +AE A+ ++G S I
Sbjct: 221 VMWDMKTGR---------------SRGYGFVAFRERSDAEKALSSMDGEW--LGSRAIRC 263
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
+AN + + + A AA H P H + M+
Sbjct: 264 NWANQ---KGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYD------------MVV 308
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
++ C +V NL P T N L LF FG V + D +GF FV M +
Sbjct: 309 AQTPQWQTTC-YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTH 361
Query: 324 DEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
+ A AI L+GY + R L+ S+ +P
Sbjct: 362 ENAAMAICQLSGYNVNGRPLKCSWGKDRP 390
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 66/219 (30%)
Query: 18 YQSDVN--EQNSN---LIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGF 72
YQS+ N E SN + V + + E L FS+ G V +++ D T +S GYGF
Sbjct: 176 YQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGF 235
Query: 73 VNYYRTEDAERAIIELNGLKLQNKSIKVSYA----RPS---------------------- 106
V + DAE+A+ ++G L +++I+ ++A +PS
Sbjct: 236 VAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHH 295
Query: 107 --SEAIKRANL------------YVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASE 152
+ ++ ++ YV L + TQ DL LF+ +G ++ +R D
Sbjct: 296 FPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD----- 350
Query: 153 NVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNG 191
+G FV+ + H A A+ +L+G
Sbjct: 351 ----------------RGFAFVKMDTHENAAMAICQLSG 373
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+ E D VL Q F FG+V +V+ D +T + +G+GFV +A A+ S+
Sbjct: 192 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSM 251
Query: 334 NGYALGDRLLQVSFKTHKPLPPV 356
+G LG R ++ ++ K P +
Sbjct: 252 DGEWLGSRAIRCNWANQKGQPSI 274
>gi|354466116|ref|XP_003495521.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
gi|344243583|gb|EGV99686.1| Polyadenylate-binding protein 4-like [Cricetulus griseus]
Length = 370
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 70/311 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + + +T++ L F++VG V S ++ RD + +SLGY +VN+ + +DA++A+
Sbjct: 10 ASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQKALD 69
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N +Q KSI++ +++ + K N+++ L K + + L F P+G I++S++
Sbjct: 70 TMNFDLIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFGKILSSKV 129
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+ D+ S+G GFV + A+ A++E+NG +
Sbjct: 130 MSDEEG-----------------SRGYGFVHYQDQSAADRAIEEMNGKL----------- 161
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
+R + F + A + T++ N
Sbjct: 162 ----------------------LRDCTVFVDRFKSRKDREAELR--SKTSEFTN------ 191
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ NL +D L +F +G +VKV++D K KGFGFV N++
Sbjct: 192 ---------VYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNG-KSKGFGFVSFYNHE 241
Query: 325 EAVFAIQSLNG 335
A A++ +NG
Sbjct: 242 AARNAVEEMNG 252
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 68/328 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS G++ S K++ D+ ++ GYGFV+Y A+RAI E
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSPFGKILSSKVMSDEEGSR--GYGFVHYQDQSAADRAIEE 156
Query: 88 LNGLKLQNKSIKVSY--ARPSSEAIKRA------NLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L++ ++ V +R EA R+ N+Y+ L +M E L+N+F YG
Sbjct: 157 MNGKLLRDCTVFVDRFKSRKDREAELRSKTSEFTNVYIKNLGDNMDDEGLKNIFSKYGQT 216
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F H A +A++E+NG G +
Sbjct: 217 LSVKVMKDDNGK----------------SKGFGFVSFYNHEAARNAVEEMNGQDING--Q 258
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V A R L KF + + +
Sbjct: 259 TIFVGRAQKKVERQAELKE-----------------------------KFEQMKKERIRA 289
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
+++ NL +D L + F FG++ VKV+++ + KGFG +C
Sbjct: 290 RQAAK---------LYIKNLDETIDDETLRREFSSFGSICRVKVMQEAG--QSKGFGLIC 338
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSF 347
+ + A A+ +NG LG + L ++
Sbjct: 339 FFSPEAAAKAMAEMNGRILGSKALNIAL 366
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 19/137 (13%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M E L+++FS G+ S K+++D +S G+GFV++Y E A A+
Sbjct: 190 TNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKD-DNGKSKGFGFVSFYNHEAARNAVE 248
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
E+NG + ++I V A+ E A + A LY+ L + + E
Sbjct: 249 EMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKKERIRARQAAKLYIKNLDETIDDET 308
Query: 129 LENLFRPYGTIITSRIL 145
L F +G+I +++
Sbjct: 309 LRREFSSFGSICRVKVM 325
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L++ F PFG + + KV+ D + +G+GFV + A AI+ +
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSPFGKILSSKVMSDEEG--SRGYGFVHYQDQSAADRAIEEM 157
Query: 334 NGYALGDRLLQVS-FKTHKP 352
NG L D + V FK+ K
Sbjct: 158 NGKLLRDCTVFVDRFKSRKD 177
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + ++ + L FS+ G++ SCK++ D+ S GYGFV++ E A RAI
Sbjct: 100 NVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E ++ N+Y+ + M + L+ +F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SG S+G GFV + H EA+ A+ E+NG G
Sbjct: 218 LSVKVMMDN----------SGR------SRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMV 261
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ GRA+ + Q R KF + + +N
Sbjct: 262 YV---------GRAQ---KRIERQGELKR-------------------KFEQIKQERINR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 70/310 (22%)
Query: 38 MTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKS 97
+T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+ +N ++ +
Sbjct: 22 VTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRP 81
Query: 98 IKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVR 155
I++ +++ P N+++ L + + L + F +G I++ +++CD+
Sbjct: 82 IRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG----- 136
Query: 156 SFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKA 215
S+G GFV F A A+Q +NG +
Sbjct: 137 ------------SRGYGFVHFETQEAANRAIQTMNGML---------------------- 162
Query: 216 LAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPPKSLHGSGWCIF 275
LN + + HF + ++ + N ++
Sbjct: 163 ----LNDRKVFVGHFKS---------RRERELEYGAKVMEFTN---------------VY 194
Query: 276 VYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNG 335
+ N + +D L ++F FG +VKV+ D + + +GFGFV N++EA A+ +NG
Sbjct: 195 IKNFGEDMDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNG 253
Query: 336 YALGDRLLQV 345
+ R++ V
Sbjct: 254 KEVNGRMVYV 263
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M + L+ +FS+ G S K++ D + +S G+GFVNY E+A++A+
Sbjct: 191 TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVT 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ + + V A+ E +KR NLYV L + +
Sbjct: 250 EMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDR 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGTITSTKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I +++P+ V A R L + A MR
Sbjct: 353 MNGRIV--STKPLYVALAQRKEERKAILTNQYMQRLATMR 390
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 68/334 (20%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
N N+ + + + + + L FS+ G + SCK+ D ++ QS GYGFV Y E A++AI
Sbjct: 114 NGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSDEAAQKAI 172
Query: 86 IELNGLKLQNKSIKVS-YARP-----SSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+LNG+ L +K + V + R + + + N++V L + +E+L +F +GTI
Sbjct: 173 EKLNGMLLNDKQVYVGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTI 232
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ ++ D+ S+ GFV F +A A++ LNG
Sbjct: 233 TSVAVMKDEDGK----------------SRCFGFVNFENAEDAARAVEALNG-------- 268
Query: 200 PITVKFANSP--AGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
K N GR AQ + R L H +F + +
Sbjct: 269 ---YKLDNKDWFVGR---------AQKKSEREME---------LKH----RFEQSAQEAV 303
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGF 317
+ S G +++ NL D+ L +LF P+G + + KV+RDP KG GF
Sbjct: 304 DKS---------QGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGV-SKGSGF 353
Query: 318 VCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
V + +EA A+ +NG + + L V+ K
Sbjct: 354 VAFSTPEEASRALSEMNGKMVVSKPLYVALAQRK 387
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 41/225 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ +EEL+ +F G + S +++D+ +S +GFVN+ EDA RA+
Sbjct: 206 TNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDED-GKSRCFGFVNFENAEDAARAVE 264
Query: 87 ELNGLKLQNKS---------------IKVSYARPSSEAIKRA---NLYVSGLPKHMTQED 128
LNG KL NK +K + + + EA+ ++ NLY+ L ++ +
Sbjct: 265 ALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDK 324
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L+ LF PYGTI + +++ D SG +SKG GFV F+ EA A+ E
Sbjct: 325 LKELFSPYGTITSCKVMRDP----------SG------VSKGSGFVAFSTPEEASRALSE 368
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAA 233
+NG + S+P+ V A R + A L AQ + MR A A
Sbjct: 369 MNGKMV--VSKPLYVALAQ----RKEERRARLQAQFSQMRPIAMA 407
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ ++L V + +T +L LF+ +G+V S ++ RD T+ +SLGYG+VNY +DA
Sbjct: 23 NQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAA 82
Query: 83 RAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
RA+ LN L K I++ Y+ P+ N+++ L K + + L + F +G I+
Sbjct: 83 RALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNIL 142
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+ ++ D SKG GFV+++ A+ A+++LNG +
Sbjct: 143 SCKVAVDSSGQ----------------SKGYGFVQYDSDEAAQKAIEKLNGML 179
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
Q NL + + +++ ++L+ LFS G + SCK++RD + S G GFV + E+A RA
Sbjct: 307 QGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGV-SKGSGFVAFSTPEEASRA 365
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKRANL 115
+ E+NG + +K + V+ A+ E +RA L
Sbjct: 366 LSEMNGKMVVSKPLYVALAQRKEE--RRARL 394
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 226 AMRHFAAAMRHFGNPLHHSAR----FKFAPLTAD---LLNNSMLPPKSLHGSGWCIFVYN 278
+ R ++GNP +AR F PL ++ ++ P G+G IF+ N
Sbjct: 64 SQRSLGYGYVNYGNP-QDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNG-NIFIKN 121
Query: 279 LAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSLNGYAL 338
L + L F FG + + KV D + + KG+GFV + + A AI+ LNG L
Sbjct: 122 LDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSDEAAQKAIEKLNGMLL 180
Query: 339 GDRLLQVS 346
D+ + V
Sbjct: 181 NDKQVYVG 188
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 70/323 (21%)
Query: 25 QNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERA 84
+ ++L V + +T++ L FS+VG V S ++ RD T +SLGY +VN+ + DA+RA
Sbjct: 107 RQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRA 166
Query: 85 IIELNGLKLQNKSIKVSYARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTIITS 142
+ +N ++ K I++ +++ + K N+++ L + + + L F +G I++S
Sbjct: 167 LDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKILSS 226
Query: 143 RILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
+++ D Q S+G FV F I A+ A++E+NG +
Sbjct: 227 KVMSDD-----------------QGSRGYAFVHFQNQIAADRAIEEMNGAL--------- 260
Query: 203 VKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSML 262
+K GR K N + A +R+ A F N
Sbjct: 261 LKDCRLFVGRFK----NRKDREAELRNKA---NEFTN----------------------- 290
Query: 263 PPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTN 322
+++ N + +D L ++F +G +VKV+ D + K KGFGFV +
Sbjct: 291 -----------VYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDS 338
Query: 323 YDEAVFAIQSLNGYALGDRLLQV 345
++ A A++ +NG + +LL V
Sbjct: 339 HEAAKKAVEEMNGKDINGQLLFV 361
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 147/333 (44%), Gaps = 69/333 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G++ S K++ D ++ GY FV++ A+RAI E
Sbjct: 198 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGSR--GYAFVHFQNQIAADRAIEE 255
Query: 88 LNGLKLQN--------KSIKVSYARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG L++ K+ K A ++A + N+Y+ M E L+ +F YG
Sbjct: 256 MNGALLKDCRLFVGRFKNRKDREAELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKT 315
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D SKG GFV F+ H A+ A++E+NG G
Sbjct: 316 LSVKVMTDSSGK----------------SKGFGFVSFDSHEAAKKAVEEMNGKDING--- 356
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ F GRA Q + R A ++ L RF+
Sbjct: 357 --QLLFV----GRA---------QKKSERQ--AELKQVFEQLKQE-RFR----------- 387
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL +D LW+ F FG++ VK++R+ + KGFG +C
Sbjct: 388 --------RCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREEG--RSKGFGLIC 437
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHKP 352
++ +EA A+ +NG LG + L ++ KP
Sbjct: 438 FSSPEEATKAMAEMNGRILGSKPLYIAL-AQKP 469
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 38/204 (18%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + M E L+ +FS G+ S K++ D ++ +S G+GFV++ E A++A+
Sbjct: 289 TNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVE 347
Query: 87 ELNGLKLQNKSIKVSYARPSS---------------EAIKRA---NLYVSGLPKHMTQED 128
E+NG + + + V A+ S E +R LY+ L + E
Sbjct: 348 EMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDDTIDDEK 407
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F +G+I SR+ K+ E R SKG G + F+ EA AM E
Sbjct: 408 LWREFSSFGSI--SRV---KIMREEGR------------SKGFGLICFSSPEEATKAMAE 450
Query: 189 LNGTIPEGASEPITVKFANSPAGR 212
+NG I S+P+ + A P R
Sbjct: 451 MNGRIL--GSKPLYIALAQKPXER 472
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + L FS+ G + SCK++ D+ S GYGFV++ E A RAI
Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQT 157
Query: 88 LNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L ++ + V + + E ++ N+Y+ + M + L +F +G
Sbjct: 158 MNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNT 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ +++ D S+G GFV + H EA+ A+ E+NG G
Sbjct: 218 LSVKVMMDDTGR----------------SRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM- 260
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
I V GRA+ + Q R KF + + +N
Sbjct: 261 -IYV-------GRAQK---RIERQGELKR-------------------KFEQIKQERINR 290
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL +D+ L + F P+G + + KV+ + KGFGFVC
Sbjct: 291 Y---------QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTE--GGHSKGFGFVC 339
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
++ +EA A+ +NG + + L V+ K
Sbjct: 340 FSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 70/321 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F A A+Q +NG +
Sbjct: 131 VCDEHG-----------------SRGYGFVHFETQEAANRAIQTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF + ++ + N
Sbjct: 163 ---------------LNDRKVFVGHFKS---------RRERELEYGAKVMEFTN------ 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N + +D L ++F FG +VKV+ D T + +GFGFV N++
Sbjct: 193 ---------VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQV 345
EA A+ +NG + R++ V
Sbjct: 243 EAQKAVSEMNGKEVNGRMIYV 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + M + L+ +FS+ G S K++ D T +S G+GFVNY E+A++A+
Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDT-GRSRGFGFVNYGNHEEAQKAVS 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
E+NG ++ + I V A+ E +KR NLYV L + +
Sbjct: 250 EMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDR 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYGTI +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGTITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMR 228
+NG I +++P+ V A R L + A MR
Sbjct: 353 MNGRIV--STKPLYVALAQRKEERKAILTNQYMQRLATMR 390
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 77/337 (22%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS+ G++ SCK++ D+ ++ GYGFV++ E A ++I +
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSAFGDILSCKVVCDENGSK--GYGFVHFATEEAANKSIEK 157
Query: 88 LNGLKLQNKSIKVS--------YARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L K + V Y + K N++V + E L +F YG I
Sbjct: 158 VNGMLLNGKKVYVGKFMSRKERYDAMGGQQKKFTNVFVKNFGDELDDEGLREMFERYGKI 217
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHA-----MQELNGTIP 194
++ +++ D + N KG GFV F I+AE+A M+++NG I
Sbjct: 218 VSHKVMQDDHSGRN---------------KGFGFVCFEDPIDAENACDDLNMKDINGRI- 261
Query: 195 EGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTA 254
+ V GRA+ + QA R +F + A
Sbjct: 262 ------LYV-------GRAQK---KIERQA-------------------ELRNRFELMKA 286
Query: 255 DLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKG 314
+ N G ++V NL +D L + F PFG + + KV+ + + KG
Sbjct: 287 ERANRY---------QGVNLYVKNLDDSLDDERLRKEFMPFGTITSAKVMSE--GGRSKG 335
Query: 315 FGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
FGFVC ++ +EA A+ +NG + + L V+ K
Sbjct: 336 FGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 372
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 138/322 (42%), Gaps = 71/322 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G + S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 11 ASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 71 SMNFDVIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGDILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ SKG GFV F A +++++NG + G +
Sbjct: 131 VCDENG-----------------SKGYGFVHFATEEAANKSIEKVNGMLLNGKKVYV--- 170
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAA-MRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
G+ + +A + F +++FG+
Sbjct: 171 ------GKFMSRKERYDAMGGQQKKFTNVFVKNFGD------------------------ 200
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
E +D L ++F +G + + KV++D + + KGFGFVC +
Sbjct: 201 ------------------ELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDP 242
Query: 324 DEAVFAIQSLNGYALGDRLLQV 345
+A A LN + R+L V
Sbjct: 243 IDAENACDDLNMKDINGRILYV 264
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 2 MKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRD 61
M +E Y+ + + +N+ V + E L+ +F G++ S K+++D
Sbjct: 174 MSRKERYDAMGGQQKKF--------TNVFVKNFGDELDDEGLREMFERYGKIVSHKVMQD 225
Query: 62 KTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPSSE------------A 109
+ ++ G+GFV + DAE A +LN + + + V A+ E
Sbjct: 226 DHSGRNKGFGFVCFEDPIDAENACDDLNMKDINGRILYVGRAQKKIERQAELRNRFELMK 285
Query: 110 IKRA------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPE 163
+RA NLYV L + E L F P+GTI +++++ SE R
Sbjct: 286 AERANRYQGVNLYVKNLDDSLDDERLRKEFMPFGTITSAKVM-----SEGGR-------- 332
Query: 164 IPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQ 223
SKG GFV F+ EA A+ E+NG I +++P+ V A R LA+ +
Sbjct: 333 ----SKGFGFVCFSSPEEATKAVTEMNGRIV--STKPLYVALAQRKEDRKAHLASQFMQR 386
Query: 224 AAAMR 228
+ +R
Sbjct: 387 MSGLR 391
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 64/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + +++ + + FS G + SCK+ D+ S GYGFV++ E A++AI +
Sbjct: 107 NIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEEL-NSKGYGFVHFETEESAQKAIEK 165
Query: 88 LNGLKLQNKSIKVSYARPS-------SEAIKR-ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L+ K + V +P E +R N+Y+ + +E LE LF +G I
Sbjct: 166 VNGMLLEGKKVYVGKFQPRMARLREMGETTRRFTNVYIKNFADELDKEALEKLFFKFGKI 225
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ ++ D SKG GFV F +AE A+ E++ G
Sbjct: 226 TSAAVMVDADGK----------------SKGFGFVAFENPEDAEKAVTEMHEYELPGTER 269
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A N ++A ++ R+ + R++
Sbjct: 270 KLYV-----------CRAQKKNERSAELKR-----RYEQQKVERMQRYQ----------- 302
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G ++V NL D++L Q F +G + + KV+ D + KGFGFVC
Sbjct: 303 -----------GVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNG-RSKGFGFVC 350
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
DEA A+ +NG + + L V+ K
Sbjct: 351 FEKPDEATKAVTEMNGKMMCTKPLYVALAQRK 382
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 69/314 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FSS G V S ++ RD T +SLGY +VN+ + DAERA+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N + K I++ +++ PS N+++ L K + + + + F +G I++ ++
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKV 137
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
D+ + SKG GFV F A+ A++++NG + EG
Sbjct: 138 ANDEELN----------------SKGYGFVHFETEESAQKAIEKVNGMLLEG-------- 173
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
K + A +R R F N
Sbjct: 174 --------KKVYVGKFQPRMARLREMGETTRRFTN------------------------- 200
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
+++ N A E + L +LF FG + + V+ D K KGFGFV N +
Sbjct: 201 ---------VYIKNFADELDKEALEKLFFKFGKITSAAVMVDADG-KSKGFGFVAFENPE 250
Query: 325 EAVFAIQSLNGYAL 338
+A A+ ++ Y L
Sbjct: 251 DAEKAVTEMHEYEL 264
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 39/230 (16%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ + + +E L+ LF G++ S ++ D +S G+GFV + EDAE+A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFFKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVT 257
Query: 87 ELNGLKL-----------------QNKSIKVSYARPSSEAIKR---ANLYVSGLPKHMTQ 126
E++ +L ++ +K Y + E ++R NLYV L +
Sbjct: 258 EMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVND 317
Query: 127 EDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAM 186
+ L+ F YG I +++++CD +N R SKG GFV F + EA A+
Sbjct: 318 DILKQNFEAYGKITSAKVMCD----DNGR------------SKGFGFVCFEKPDEATKAV 361
Query: 187 QELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRH 236
E+NG + ++P+ V A R LA+ + A++R A H
Sbjct: 362 TEMNGKMM--CTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHNAGTMH 409
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 70/322 (21%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
++L V + +T+ L FS G + S ++ RD T +SLGY ++N+ + DAERA+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 87 ELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRI 144
+N ++ + I++ +++ P N+++ L + + L + F +G I++ ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 145 LCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVK 204
+CD+ S+G GFV F H A++A+ +NG +
Sbjct: 131 VCDEHG-----------------SRGFGFVHFETHEAAQNAISTMNGML----------- 162
Query: 205 FANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLPP 264
LN + + HF S R + L A + +
Sbjct: 163 ---------------LNDRKVFVGHF------------KSRREREVELGARAMEFTN--- 192
Query: 265 KSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYD 324
I+V NL + ++ L LF FG + +VKV+RD + +GFGFV ++
Sbjct: 193 ---------IYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHS-RGFGFVNFEKHE 242
Query: 325 EAVFAIQSLNGYALGDRLLQVS 346
EA A+ ++NG + RLL V
Sbjct: 243 EAQKAVVNMNGREVSGRLLYVG 264
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 68/329 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + ++ + L FS+ G + SCK++ D+ ++ G+GFV++ E A+ AI
Sbjct: 99 GNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSR--GFGFVHFETHEAAQNAIS 156
Query: 87 ELNGLKLQNKSIKVSYARPSSE--------AIKRANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L ++ + V + + E A++ N+YV L + ++ L++LF +G
Sbjct: 157 TMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGK 216
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
+++ +++ D VSG S+G GFV F +H EA+ A+ +NG E +
Sbjct: 217 MLSVKVMRD----------VSGH------SRGFGFVNFEKHEEAQKAVVNMNGR--EVSG 258
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V GRA+ N + +F + D L
Sbjct: 259 RLLYV-------GRAQKRVERQN----------------------ELKRRFEQMKQDRLT 289
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFV 318
G ++V NL +D L + F P+G + + KV+ + KGFGFV
Sbjct: 290 RY---------QGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMT--EGGHSKGFGFV 338
Query: 319 CMTNYDEAVFAIQSLNGYALGDRLLQVSF 347
C ++ +EA A+ +NG +G + L V+
Sbjct: 339 CFSSPEEATKAVTEMNGRIVGTKPLYVAL 367
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 48/233 (20%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + + ++ LQ LFS G++ S K++RD + S G+GFVN+ + E+A++A++
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKAVV 249
Query: 87 ELNGLKLQNKSIKVSYARPSSE---AIKR---------------ANLYVSGLPKHMTQED 128
+NG ++ + + V A+ E +KR NLYV L + E
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEK 309
Query: 129 LENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQE 188
L F PYG I +++++ + SKG GFV F+ EA A+ E
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-----------------SKGFGFVCFSSPEEATKAVTE 352
Query: 189 LNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPL 241
+NG I ++P+ V A GR KA+ N Q + MR G P+
Sbjct: 353 MNGRIV--GTKPLYVALAE---GR-KAILTNQYMQR------LSTMRALGGPI 393
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IF+ NL ++ L+ F FG + + KVV D + +GFGFV ++ A AI ++
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--EHGSRGFGFVHFETHEAAQNAISTM 158
Query: 334 NGYALGDRLLQVS-FKTHK 351
NG L DR + V FK+ +
Sbjct: 159 NGMLLNDRKVFVGHFKSRR 177
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LF+S+G V S ++ RD T +SLGY +VN++ ED E+A+
Sbjct: 79 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 138
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ PS + N+++ L + + L + F +G I++ +
Sbjct: 139 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCK 198
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D++ + +KG GFV F+ A A++ +NG +
Sbjct: 199 VAVDELGN----------------AKGYGFVHFDSVESANAAIEHVNGML---------- 232
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H + + K L A+ N
Sbjct: 233 ----------------LNDKKVYVGHHVS---------RRERQSKVEALKANFTN----- 262
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ NL E + LFG FG + ++ +V+D Q K +GFGFV N+
Sbjct: 263 ----------VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANH 311
Query: 324 DEAVFAIQSLN 334
+ A A+ LN
Sbjct: 312 ECAQKAVDELN 322
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + L FS+ G++ SCK+ D+ + GYGFV++ E A AI
Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEH 227
Query: 88 LNGLKLQNKSIKVSY------ARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + + EA+K N+Y+ L +T+++ +LF +G I
Sbjct: 228 VNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEI 287
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ ++ D+ +G GFV + H A+ A+ ELN E +
Sbjct: 288 TSLSLVKDQNDK----------------PRGFGFVNYANHECAQKAVDELNDK--EYKGK 329
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A R + L R ++ + + +N
Sbjct: 330 KLYVGRAQKKHEREEEL-----------------------------RKRYEQMKLEKMNK 360
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +F+ NL E +D L F FG + + K++ D Q K KGFGFVC
Sbjct: 361 Y---------QGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQG-KSKGFGFVC 410
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T +EA A+ +N L + L V+ K
Sbjct: 411 YTTPEEANKAVTEMNQRMLAGKPLYVALAQRK 442
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQ---TMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS V +N Y+ +T++E LF GE+ S
Sbjct: 232 LLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLS 291
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARP----SSEAIKR- 112
L++D+ + G+GFVNY E A++A+ ELN + + K + V A+ E KR
Sbjct: 292 LVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRY 350
Query: 113 -------------ANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NL++ L + E L+ F +GTI +++I+ D+
Sbjct: 351 EQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGK-------- 402
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV + EA A+ E+N + G +P+ V A R L A
Sbjct: 403 --------SKGFGFVCYTTPEEANKAVTEMNQRMLAG--KPLYVALAQRKEVRRSQLEAQ 452
Query: 220 LNAQ 223
+ A+
Sbjct: 453 IQAR 456
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 78/338 (23%)
Query: 16 STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
S ++ N +++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY
Sbjct: 42 SAAPANANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 101
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLF 133
D ERA+ ELN ++ K ++ +++ P+ N+++ L + + L + F
Sbjct: 102 NSANDGERALEELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTF 161
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+G I++ ++ D+ S+G GFV + A A++ +NG +
Sbjct: 162 AAFGNILSCKVAQDESGG----------------SRGYGFVHYETAEAANAAIKSVNGML 205
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLT 253
LN + + H H S KF +
Sbjct: 206 --------------------------LNEKKVFVGH------HIPKKDRMS---KFEEMK 230
Query: 254 ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
A+ N I+V N+ ET D+ +LF +G + + + RD Q K +
Sbjct: 231 ANFTN---------------IYVKNIDTETTDDEFRELFEKYGEITSASLARD-QEGKVR 274
Query: 314 GFGFVCMTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
GFGFV +++A A+ LN + FK+ K
Sbjct: 275 GFGFVNYIRHEDANKAVDELN---------DIDFKSQK 303
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 60/254 (23%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + T +E + LF GE+ S L RD+ + G+GFVNY R EDA +A+
Sbjct: 234 TNIYVKNIDTETTDDEFRELFEKYGEITSASLARDQE-GKVRGFGFVNYIRHEDANKAVD 292
Query: 87 ELNGLKLQNKSIKVSYARPS---SEAIKR---------------ANLYVSGLPKHMTQED 128
ELN + +++ + V A+ E ++R NLYV L + E+
Sbjct: 293 ELNDIDFKSQKLYVGRAQKKHEREEELRRQYEAQRQEKSAKYMGVNLYVKNLADDIDDEE 352
Query: 129 LENLFRPYGTIITSRILCDKMASENVRS-------------------------------- 156
L +F YG+I +++++ D ++ V +
Sbjct: 353 LRKVFEAYGSITSAKVMRDTTPADQVENAEEEKKEDGENEAESSEEKKEDEKKEDGTEEL 412
Query: 157 -------FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSP 209
+ G ++ SKG GFV F+ EA A+ ELN + G +P+ V A
Sbjct: 413 TKKLDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIHG--KPLYVALAQRK 470
Query: 210 AGRAKALAANLNAQ 223
R L A++ A+
Sbjct: 471 EVRKSQLEASIQAR 484
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 69/321 (21%)
Query: 16 STYQSDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
S S+ N +++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY
Sbjct: 45 SAAPSNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 104
Query: 76 YRTEDAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLF 133
D ERA+ ELN ++ K ++ +++ P+ + N+++ L + + L + F
Sbjct: 105 NSANDGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTF 164
Query: 134 RPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+G I++ ++ D+ + SKG GFV + A A++ +NG +
Sbjct: 165 AAFGNILSCKVAQDEHGN----------------SKGYGFVHYETAEAANSAIKSVNGML 208
Query: 194 PEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLT 253
LN + + H H S KF +
Sbjct: 209 --------------------------LNEKKVFVGH------HIPKKDRMS---KFEEMK 233
Query: 254 ADLLNNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCK 313
A+ N I+V N+ PE D+ LF +G + + + D Q K +
Sbjct: 234 ANFTN---------------IYVKNIDPEATDDEFRALFEKYGDITSASLAHD-QEGKSR 277
Query: 314 GFGFVCMTNYDEAVFAIQSLN 334
GFGFV +++A A++ LN
Sbjct: 278 GFGFVNYIRHEDANKAVEELN 298
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 65/288 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A AI
Sbjct: 144 GNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETAEAANSAIK 202
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P + + + N+YV + T ++ LF YG
Sbjct: 203 SVNGMLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDPEATDDEFRALFEKYGD 262
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ + D+ S+G GFV + +H +A A++ELN + +G +
Sbjct: 263 ITSASLAHDQEGK----------------SRGFGFVNYIRHEDANKAVEELNNSDFKGQA 306
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ V A R + L AQ SA+++
Sbjct: 307 --LYVGRAQKKHEREEELRKQYEAQRQ----------------EKSAKYQ---------- 338
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
G ++V NLA E +D+ L ++F P+GA+ + KV+RD
Sbjct: 339 ------------GVNLYVKNLADEIDDDELRKIFEPYGAITSAKVMRD 374
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 67/261 (25%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + T +E + LF G++ S L D+ +S G+GFVNY R EDA +A+
Sbjct: 237 TNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQE-GKSRGFGFVNYIRHEDANKAVE 295
Query: 87 ELNGLKLQNKSIKVSYA----------RPSSEAIKR--------ANLYVSGLPKHMTQED 128
ELN + +++ V A R EA ++ NLYV L + ++
Sbjct: 296 ELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDDE 355
Query: 129 LENLFRPYGTIITSRILCDKMASENVRS-------------------------------- 156
L +F PYG I +++++ D + ++ V +
Sbjct: 356 LRKIFEPYGAITSAKVMRDTIPADEVAASKKDEEKSDEEKQSDDEEKKDEGDKNEEGEKK 415
Query: 157 --------------FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPIT 202
+ G +I SKG GFV F+ EA A+ ELN + G +P+
Sbjct: 416 EGDVEDVIKKLDTITIGGEKKILGKSKGFGFVCFSNPDEATKAVTELNQKMIHG--KPLY 473
Query: 203 VKFANSPAGRAKALAANLNAQ 223
V A R L A++ A+
Sbjct: 474 VALAQRKEVRKSQLEASIQAR 494
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
+F+ NL ++ L F FG + + KV +D + KG+GFV + A AI+S+
Sbjct: 146 VFIKNLDGAIDNKALHDTFAAFGNILSCKVAQD-EHGNSKGYGFVHYETAEAANSAIKSV 204
Query: 334 NGYALGDR 341
NG L ++
Sbjct: 205 NGMLLNEK 212
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 69/311 (22%)
Query: 26 NSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAI 85
+++L V + ++T+ L LF+S+G V S ++ RD T +SLGY +VN++ ED E+A+
Sbjct: 65 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 124
Query: 86 IELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTIITSR 143
ELN ++ + ++ +++ PS + N+++ L + + L + F +G I++ +
Sbjct: 125 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCK 184
Query: 144 ILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITV 203
+ D++ + +KG GFV F+ A A++ +NG +
Sbjct: 185 VAVDELGN----------------AKGYGFVHFDSVESANAAIEHVNGML---------- 218
Query: 204 KFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNSMLP 263
LN + + H + + K L A+ N
Sbjct: 219 ----------------LNDKKVYVGHHVS---------RRERQSKVEALKANFTN----- 248
Query: 264 PKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNY 323
+++ NL E + LFG FG + ++ +V+D Q K +GFGFV N+
Sbjct: 249 ----------VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANH 297
Query: 324 DEAVFAIQSLN 334
+ A A+ LN
Sbjct: 298 ECAQKAVDELN 308
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 139/332 (41%), Gaps = 66/332 (19%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + L FS+ G++ SCK+ D+ + GYGFV++ E A AI
Sbjct: 155 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEH 213
Query: 88 LNGLKLQNKSIKVSY------ARPSSEAIKR--ANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + + EA+K N+Y+ L +T+++ +LF +G I
Sbjct: 214 VNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEI 273
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
+ ++ D+ + P +G GFV + H A+ A+ ELN E +
Sbjct: 274 TSLSLVKDQ----------NDKP------RGFGFVNYANHECAQKAVDELNDK--EYKGK 315
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A R + L R + + + +N
Sbjct: 316 KLYVGRAQKKHEREEEL-----------------------------RKAYEQMKLEKMNK 346
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +F+ NL E +D L F FG + + K++ D Q K KGFGFVC
Sbjct: 347 Y---------QGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQG-KSKGFGFVC 396
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVSFKTHK 351
T +EA A+ +N L + L V+ K
Sbjct: 397 YTTPEEANKAVTEMNQRMLAGKPLYVALAQRK 428
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 40/244 (16%)
Query: 1 MMKHEEMYNTTQSHRSTYQSDVNEQNSNLIVNYVPQ---TMTQEELQHLFSSVGEVESCK 57
++ +++Y R QS V +N Y+ +T++E LF GE+ S
Sbjct: 218 LLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLS 277
Query: 58 LIRDKTTAQSLGYGFVNYYRTEDAERAIIELNGLKLQNKSIKVSYARPS---SEAIKRA- 113
L++D+ + G+GFVNY E A++A+ ELN + + K + V A+ E +++A
Sbjct: 278 LVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKAY 336
Query: 114 --------------NLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
NL++ L + E L+ F +GTI +++I+ D+
Sbjct: 337 EQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGK-------- 388
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAAN 219
SKG GFV + EA A+ E+N + G +P+ V A R L A
Sbjct: 389 --------SKGFGFVCYTTPEEANKAVTEMNQRMLAG--KPLYVALAQRKEVRRSQLEAQ 438
Query: 220 LNAQ 223
+ A+
Sbjct: 439 IQAR 442
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 69/314 (21%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ +++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY +ED E
Sbjct: 44 NQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGE 103
Query: 83 RAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
+A+ ELN ++ K ++ +++ P+ + N+++ L + + L + F +G I+
Sbjct: 104 KALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNIL 163
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ D++ + SKG GFV + A +A++ +NG +
Sbjct: 164 SCKVAQDELGN----------------SKGYGFVHYETAEAANNAIKHVNGML------- 200
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
LN + + H H S KF + A+ N
Sbjct: 201 -------------------LNEKKVFVGH------HIPKKERMS---KFEEMKANFTN-- 230
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
I+V N+ + D+ LF G + + + RD Q K +GFGFV
Sbjct: 231 -------------IYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQG-KSRGFGFVNY 276
Query: 321 TNYDEAVFAIQSLN 334
++ A A+ +LN
Sbjct: 277 IKHEAASAAVDALN 290
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 65/288 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A AI
Sbjct: 136 GNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEL-GNSKGYGFVHYETAEAANNAIK 194
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P E + + N+YV + ++ +D +LF +G
Sbjct: 195 HVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDDDFRDLFEKHGD 254
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ I D S+G GFV + +H A A+ LN T G
Sbjct: 255 ITSASIARDDQGK----------------SRGFGFVNYIKHEAASAAVDALNDTDFRG-- 296
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L + + AA L ++++
Sbjct: 297 QKLYVGRAQKKHEREEEL----------RKQYEAAR------LEKQSKYQ---------- 330
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
G +++ NL + +D L +F PFG + + KV+RD
Sbjct: 331 ------------GVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRD 366
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 59/253 (23%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ ++ + LF G++ S + RD +S G+GFVNY + E A A+
Sbjct: 229 TNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARD-DQGKSRGFGFVNYIKHEAASAAVD 287
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LN + + + V A+ E + NLY+ L + E
Sbjct: 288 ALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEK 347
Query: 129 LENLFRPYGTIITSRILCDKM---ASENVRS----------------------------- 156
L ++F P+GTI +++++ D M SE+
Sbjct: 348 LRDMFTPFGTITSAKVMRDAMPAAGSEDATDEKKDETKEETEKPEEAKDESKEDSDDKKD 407
Query: 157 ------FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPA 210
+ G +I SKG GFV F+ EA A+ E+N + E ++P+ V A
Sbjct: 408 EKADKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIE--NKPLYVALAQRKD 465
Query: 211 GRAKALAANLNAQ 223
R L A + A+
Sbjct: 466 VRKNQLEATIQAR 478
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 69/314 (21%)
Query: 23 NEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAE 82
N+ +++L V + ++T+ L LFSS+G+V S ++ RD T +SLGY +VNY +ED E
Sbjct: 44 NQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGE 103
Query: 83 RAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTII 140
+A+ ELN ++ K ++ +++ P+ + N+++ L + + L + F +G I+
Sbjct: 104 KALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNIL 163
Query: 141 TSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEP 200
+ ++ D++ + SKG GFV + A +A++ +NG +
Sbjct: 164 SCKVAQDELGN----------------SKGYGFVHYETAEAANNAIKHVNGML------- 200
Query: 201 ITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNNS 260
LN + + H KF + A+ N
Sbjct: 201 -------------------LNEKKVFVGHHIPKKERMS---------KFEEMKANFTN-- 230
Query: 261 MLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCM 320
I+V N+ + D +LF G + + + RD Q K +GFGFV
Sbjct: 231 -------------IYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQG-KSRGFGFVNY 276
Query: 321 TNYDEAVFAIQSLN 334
++ A A+ +LN
Sbjct: 277 IKHEAASAAVDALN 290
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 65/288 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
N+ + + + + L F++ G + SCK+ +D+ S GYGFV+Y E A AI
Sbjct: 136 GNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEL-GNSKGYGFVHYETAEAANNAIK 194
Query: 87 ELNGLKLQNKSIKVSYARPSSEAIKR--------ANLYVSGLPKHMTQEDLENLFRPYGT 138
+NG+ L K + V + P E + + N+YV + ++ E+ LF +G
Sbjct: 195 HVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGD 254
Query: 139 IITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGAS 198
I ++ I D+ S+G GFV + +H A A+ LN T G
Sbjct: 255 ITSASIARDEQGK----------------SRGFGFVNYIKHEAASAAVDALNDTDFRG-- 296
Query: 199 EPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLN 258
+ + V A R + L + + AA L ++++
Sbjct: 297 QKLYVGRAQKKHEREEEL----------RKQYEAAR------LEKQSKYQ---------- 330
Query: 259 NSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRD 306
G +++ NL + +D L +F PFG + + KV+RD
Sbjct: 331 ------------GVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRD 366
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 57/251 (22%)
Query: 27 SNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAII 86
+N+ V + ++ EE + LF G++ S + RD+ +S G+GFVNY + E A A+
Sbjct: 229 TNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQ-GKSRGFGFVNYIKHEAASAAVD 287
Query: 87 ELNGLKLQNKSIKVSYARPSSE------------------AIKRANLYVSGLPKHMTQED 128
LN + + + V A+ E + NLY+ L + E
Sbjct: 288 ALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEK 347
Query: 129 LENLFRPYGTIITSRILCDKMASENVRS-------------------------------- 156
L ++F P+GTI +++++ D M +E +
Sbjct: 348 LRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEEAKEESEKTEESNEGADDKKDENKP 407
Query: 157 ----FVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASEPITVKFANSPAGR 212
+ G +I SKG GFV F+ EA A+ E+N + EG +P+ V A R
Sbjct: 408 GEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEG--KPLYVALAQRKDVR 465
Query: 213 AKALAANLNAQ 223
L A + A+
Sbjct: 466 KNQLEATIQAR 476
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 142/323 (43%), Gaps = 54/323 (16%)
Query: 21 DVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTED 80
D + S + N PQ +T+ LQ +FSS G +E CKLIR + ++ YGFV+Y+
Sbjct: 49 DSSTCRSVYVGNIHPQ-VTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRS 103
Query: 81 AERAIIELNGLKLQNKSIKVSYARPSSEAIKRA---NLYVSGLPKHMTQEDLENLFRPYG 137
A +I+ LNG L + IKV++A SS+ + N++V L +T L F Y
Sbjct: 104 AALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYP 163
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGA 197
+ +R++ D+ S+G GFV F EA+ A+ +LNG
Sbjct: 164 SCSDARVMWDQKTGR---------------SRGFGFVSFRNQQEAQSAINDLNGRWL--G 206
Query: 198 SEPITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLL 257
S I +A AG N +A++ N + K
Sbjct: 207 SRQIRCNWATKGAG-GNEDKPNSDAKSVV---------ELTNGTSEDGKDK--------- 247
Query: 258 NNSMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPF--GAVQNVKVVRDPQTYKCKGF 315
+N P +L + ++V NLAPE L + F GA+++V+V RD KGF
Sbjct: 248 SNDEAPENNLQYT--TVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRD------KGF 299
Query: 316 GFVCMTNYDEAVFAIQSLNGYAL 338
GFV + + EA AIQ N L
Sbjct: 300 GFVRYSTHAEAALAIQMGNARIL 322
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 274 IFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVCMTNYDEAVFAIQSL 333
IFV +L+PE D L+ F + + + +V+ D +T + +GFGFV N EA AI L
Sbjct: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 200
Query: 334 NGYALGDRLLQVSFKT 349
NG LG R ++ ++ T
Sbjct: 201 NGRWLGSRQIRCNWAT 216
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 86/214 (40%), Gaps = 57/214 (26%)
Query: 18 YQSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVN 74
Y S E S N+ V + +T L FS +++ D+ T +S G+GFV+
Sbjct: 127 YASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVS 186
Query: 75 YYRTEDAERAIIELNGLKLQNKSIKVSYA---------RPSSEA---------------- 109
+ ++A+ AI +LNG L ++ I+ ++A +P+S+A
Sbjct: 187 FRNQQEAQSAINDLNGRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKD 246
Query: 110 ----------IKRANLYVSGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVS 159
++ +YV L +T DL F G A E+VR
Sbjct: 247 KSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHALGA----------GAIEDVRV--- 293
Query: 160 GTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
Q KG GFVR++ H EA A+Q N I
Sbjct: 294 ------QRDKGFGFVRYSTHAEAALAIQMGNARI 321
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 142/327 (43%), Gaps = 66/327 (20%)
Query: 28 NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTEDAERAIIE 87
N+ + + + + + L F++ G V SCK+ D+ +S G+GFV+Y E A+ AI
Sbjct: 145 NIFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDEN-GRSRGFGFVHYDTAEAADTAIKA 203
Query: 88 LNGLKLQNKSIKVSY--------ARPSSEAIKRANLYVSGLPKHMTQEDLENLFRPYGTI 139
+NG+ L +K + V + A + + NLYV L +T ++ ++F +G +
Sbjct: 204 VNGMLLNDKKVFVGHYISKKERQAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEV 263
Query: 140 ITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTIPEGASE 199
++ + D+ SKG GFV F H A+ A+ L+ T E +
Sbjct: 264 TSAVVQKDEEGK----------------SKGFGFVNFKDHESAQAAVDALHDT--ELNGK 305
Query: 200 PITVKFANSPAGRAKALAANLNAQAAAMRHFAAAMRHFGNPLHHSARFKFAPLTADLLNN 259
+ V A A R + L + + A M + K+
Sbjct: 306 KLFVTRAQKKAEREEELRKSY--EQAKMEKLS----------------KY---------- 337
Query: 260 SMLPPKSLHGSGWCIFVYNLAPETEDNVLWQLFGPFGAVQNVKVVRDPQTYKCKGFGFVC 319
G +++ NL + +D+ L F PFG + + K++RD + KGFGFVC
Sbjct: 338 ----------QGANLYIKNLEDDMDDDKLRAEFEPFGTITSCKIMRD-EKGTSKGFGFVC 386
Query: 320 MTNYDEAVFAIQSLNGYALGDRLLQVS 346
++ +EA A+ +N LG + L VS
Sbjct: 387 YSSPEEATKAVAEMNNKMLGSKPLYVS 413
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 44/233 (18%)
Query: 19 QSDVNEQNS---NLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNY 75
Q+ ++EQ S NL V + +T +E +F+ GEV S + +D+ +S G+GFVN+
Sbjct: 226 QAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEE-GKSKGFGFVNF 284
Query: 76 YRTEDAERAI-----IELNGLKL----------QNKSIKVSYARPSSEAIKR---ANLYV 117
E A+ A+ ELNG KL + + ++ SY + E + + ANLY+
Sbjct: 285 KDHESAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYI 344
Query: 118 SGLPKHMTQEDLENLFRPYGTIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFN 177
L M + L F P+GTI + +I+ D+ + SKG GFV ++
Sbjct: 345 KNLEDDMDDDKLRAEFEPFGTITSCKIMRDEKGT----------------SKGFGFVCYS 388
Query: 178 QHIEAEHAMQELNGTIPEGASEPITVKFANSPAGRAKALAANLNAQAAAMRHF 230
EA A+ E+N + S+P+ V SPA R + L +Q AA +F
Sbjct: 389 SPEEATKAVAEMNNKM--LGSKPLYV----SPAQRREVRRQQLESQIAARNNF 435
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 20 SDVNEQNSNLIVNYVPQTMTQEELQHLFSSVGEVESCKLIRDKTTAQSLGYGFVNYYRTE 79
S + +++L V + T+T+ L +F+ +G V S ++ RD T +SLGY +VNY
Sbjct: 49 SGASTPSASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAA 108
Query: 80 DAERAIIELNGLKLQNKSIKVSYAR--PSSEAIKRANLYVSGLPKHMTQEDLENLFRPYG 137
D ERA+ +LN ++N++ ++ +++ P+ + N+++ L + + + L + F +G
Sbjct: 109 DGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFG 168
Query: 138 TIITSRILCDKMASENVRSFVSGTPEIPQISKGIGFVRFNQHIEAEHAMQELNGTI 193
+++ ++ D EN R S+G GFV ++ A+ A++ +NG +
Sbjct: 169 NVLSCKVATD----ENGR------------SRGFGFVHYDTAEAADTAIKAVNGML 208
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,485,147,015
Number of Sequences: 23463169
Number of extensions: 225338614
Number of successful extensions: 691578
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15841
Number of HSP's successfully gapped in prelim test: 7244
Number of HSP's that attempted gapping in prelim test: 584352
Number of HSP's gapped (non-prelim): 85265
length of query: 356
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 213
effective length of database: 9,003,962,200
effective search space: 1917843948600
effective search space used: 1917843948600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)