Query psy9314
Match_columns 634
No_of_seqs 87 out of 89
Neff 3.2
Searched_HMMs 13730
Date Sat Aug 17 00:13:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9314.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9314hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lvaa4 a.4.5.35 (A:575-634) C 1.0 4.6E+02 0.034 19.2 -0.1 16 190-205 29-44 (60)
2 d1deeg_ a.8.1.1 (G:) Immunoglo 0.9 3.8E+02 0.027 19.5 -0.9 19 146-164 29-47 (51)
3 d1utga_ a.101.1.1 (A:) Uterogl 0.8 7.2E+02 0.053 18.8 0.6 23 3-27 27-52 (70)
4 d1z01a2 d.129.3.3 (A:164-442) 0.8 5.9E+02 0.043 22.6 -0.2 32 594-625 28-59 (279)
5 d1t3qa2 d.15.4.2 (A:7-87) Quin 0.7 9.2E+02 0.067 18.1 0.7 21 171-191 57-80 (81)
6 d2ejna1 a.101.1.1 (A:1-72) All 0.6 8.7E+02 0.063 18.5 0.2 14 4-17 28-41 (72)
7 d1lp1a_ a.8.1.1 (A:) Immunoglo 0.6 6.2E+02 0.045 18.5 -0.9 19 146-164 33-51 (55)
8 d1ccda_ a.101.1.1 (A:) Clara c 0.6 1.1E+03 0.078 18.1 0.4 16 2-17 28-43 (77)
9 d1xr4a1 c.124.1.2 (A:1-236) Pu 0.5 6.8E+02 0.05 22.9 -1.1 38 70-107 197-234 (236)
10 d1oysa1 d.14.1.4 (A:1-151) Rib 0.5 1.5E+03 0.11 17.1 1.0 17 27-43 127-143 (151)
No 1
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=0.98 E-value=4.6e+02 Score=19.21 Aligned_cols=16 Identities=25% Similarity=0.015 Sum_probs=8.4
Q ss_pred cccccccchhhhhhhc
Q psy9314 190 VLAEKDVEQSSEVLAE 205 (634)
Q Consensus 190 ~~~~~~~~Qs~e~l~~ 205 (634)
|++|+-.++=.||||.
T Consensus 29 g~sRK~ai~lLE~~D~ 44 (60)
T d1lvaa4 29 GSSRKYVLPLLEYLDQ 44 (60)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhh
Confidence 4555555555555553
No 2
>d1deeg_ a.8.1.1 (G:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=0.91 E-value=3.8e+02 Score=19.52 Aligned_cols=19 Identities=37% Similarity=0.442 Sum_probs=13.1
Q ss_pred cchhhhcccccchhhcccc
Q psy9314 146 KDVEQSGEVLTEKDEVQNS 164 (634)
Q Consensus 146 ~d~l~s~E~L~dke~l~~a 164 (634)
-||-++.+.|.+++.|-++
T Consensus 29 ddPs~sanvl~EakkLnds 47 (51)
T d1deeg_ 29 DDPSQSTNVLGEAKKLNES 47 (51)
T ss_dssp HCGGGHHHHHHHHHHHHHH
T ss_pred hChHHHHHHHHHHHHcccc
Confidence 4677777777777776554
No 3
>d1utga_ a.101.1.1 (A:) Uteroglobin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=0.85 E-value=7.2e+02 Score=18.80 Aligned_cols=23 Identities=9% Similarity=0.156 Sum_probs=16.0
Q ss_pred ccccchhhhhhhhhh---hcccccccch
Q psy9314 3 IYKQGDEVLAEKDEV---QSSEVLSEKD 27 (634)
Q Consensus 3 ~~~~~~dvla~~dal---vdad~la~~d 27 (634)
-|+.++|+|+.+..| || .|..-|
T Consensus 27 ~y~~~~~~le~~~~lK~cvD--tLt~ed 52 (70)
T d1utga_ 27 EFEPDDTMKDAGMQMKKVLD--SLPQTT 52 (70)
T ss_dssp TTCCCHHHHHHHHHHHHHHT--TSCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHh--cCCHHH
Confidence 488899999877776 55 355444
No 4
>d1z01a2 d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]}
Probab=0.79 E-value=5.9e+02 Score=22.59 Aligned_cols=32 Identities=22% Similarity=0.081 Sum_probs=25.7
Q ss_pred hhhcccccchhhhhcccccccccchhhhhccc
Q psy9314 594 VLAEKDVVQSSEVLSEKNEVQSSEVLIDHSYQ 625 (634)
Q Consensus 594 ~l~~k~~~~s~e~l~~k~~~~s~e~l~~~~~~ 625 (634)
++....+++-...+.+-|-+|..|-.||.+|+
T Consensus 28 ~~~~~~~~~~~~~~~~~NWlQ~~En~iD~aH~ 59 (279)
T d1z01a2 28 VLDDNAVVHGMHRTGFGNWRIACENGFDNAHI 59 (279)
T ss_dssp TTSTTEEEEEEEEEEESCHHHHHTTTTCTTGG
T ss_pred ccCCCceEEEEEEEeecchhhhhhcCcChhhe
Confidence 45566667767778888999999999999985
No 5
>d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]}
Probab=0.70 E-value=9.2e+02 Score=18.08 Aligned_cols=21 Identities=29% Similarity=0.283 Sum_probs=8.9
Q ss_pred cccchhhhhh---ccccccccccc
Q psy9314 171 NVVQSSEVLA---EENEVQSSEVL 191 (634)
Q Consensus 171 ~~vqs~e~l~---~~~~~~t~~~~ 191 (634)
.++++|-++. +.+++-|-+||
T Consensus 57 ~~v~sCl~~~~~~~g~~V~TiEGL 80 (81)
T d1t3qa2 57 APMRSCLTLAVQAEGCSIETVEGL 80 (81)
T ss_dssp EEEEGGGSBGGGGTTCEEECGGGT
T ss_pred CEEeehhheHhhcCCCEEEEeccC
Confidence 3444444443 33334444443
No 6
>d2ejna1 a.101.1.1 (A:1-72) Allergen Fel d I-A chain {Cat (Felis catus) [TaxId: 9685]}
Probab=0.63 E-value=8.7e+02 Score=18.54 Aligned_cols=14 Identities=29% Similarity=0.252 Sum_probs=10.7
Q ss_pred cccchhhhhhhhhh
Q psy9314 4 YKQGDEVLAEKDEV 17 (634)
Q Consensus 4 ~~~~~dvla~~dal 17 (634)
|+..++||..++-+
T Consensus 28 Y~~~p~vLEnae~i 41 (72)
T d2ejna1 28 YKALPVVLENARIL 41 (72)
T ss_dssp HCCCHHHHHHHHHH
T ss_pred hcCCHHHHHhHHHH
Confidence 77788888777766
No 7
>d1lp1a_ a.8.1.1 (A:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=0.59 E-value=6.2e+02 Score=18.45 Aligned_cols=19 Identities=26% Similarity=0.475 Sum_probs=12.2
Q ss_pred cchhhhcccccchhhcccc
Q psy9314 146 KDVEQSGEVLTEKDEVQNS 164 (634)
Q Consensus 146 ~d~l~s~E~L~dke~l~~a 164 (634)
-||-||...|.+++.|-++
T Consensus 33 DDPSqSan~LaEAkklNd~ 51 (55)
T d1lp1a_ 33 DDPSQSANLLAEAKKLNDA 51 (55)
T ss_dssp HCGGGHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHcccc
Confidence 4666777777666666554
No 8
>d1ccda_ a.101.1.1 (A:) Clara cell 17kDa protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=0.56 E-value=1.1e+03 Score=18.07 Aligned_cols=16 Identities=0% Similarity=0.194 Sum_probs=12.3
Q ss_pred cccccchhhhhhhhhh
Q psy9314 2 SIYKQGDEVLAEKDEV 17 (634)
Q Consensus 2 ~~~~~~~dvla~~dal 17 (634)
.-|+.++|+++-+.-|
T Consensus 28 k~y~~d~~~lea~~~L 43 (77)
T d1ccda_ 28 KPFNPASDLQNAGTQL 43 (77)
T ss_dssp TTTCCCHHHHHHHHHH
T ss_pred HccCCCHHHHHHHHHH
Confidence 3588889998877766
No 9
>d1xr4a1 c.124.1.2 (A:1-236) Putative citrate lyase alpha chain, citF2 {Salmonella typhimurium [TaxId: 90371]}
Probab=0.54 E-value=6.8e+02 Score=22.89 Aligned_cols=38 Identities=16% Similarity=0.108 Sum_probs=20.4
Q ss_pred hhhchhhhhhhhhhhccccccccccccccccccccccc
Q psy9314 70 VLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVS 107 (634)
Q Consensus 70 ~Lal~d~l~daevL~~~~aLv~ad~L~d~daLv~ae~L 107 (634)
|.++||.|+.--..+-+=.--.+|+...+|.+-|+..+
T Consensus 197 VV~vTD~lvpyP~~p~sI~q~~VDyVV~Vd~iGDp~kI 234 (236)
T d1xr4a1 197 VVLLTEEWVEFPNYPASIAQDQVDLIVQVDEVGDPEKI 234 (236)
T ss_dssp EEEEESCEECSSCSSCSBCGGGCSEEEECSCSSCHHHH
T ss_pred EEEEeccCcCCCCCCcccccccccEEEEecCccChhhc
Confidence 55566666555444444444455666666665555443
No 10
>d1oysa1 d.14.1.4 (A:1-151) Ribonuclease PH, domain 1 {Bacillus subtilis [TaxId: 1423]}
Probab=0.48 E-value=1.5e+03 Score=17.09 Aligned_cols=17 Identities=18% Similarity=0.010 Sum_probs=0.0
Q ss_pred hhhhhhhhhhhhhhhhh
Q psy9314 27 DEVQSSEVSAKKEAIQS 43 (634)
Q Consensus 27 dalv~a~vla~~ealvd 43 (634)
||..-|=.+|+.||+++
T Consensus 127 ~a~i~Aa~~AL~dA~~~ 143 (151)
T d1oysa1 127 TASITGAFLAMAIAIGK 143 (151)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Done!