RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy9314
(634 letters)
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional.
Length = 2084
Score = 62.5 bits (151), Expect = 6e-10
Identities = 98/567 (17%), Positives = 233/567 (41%), Gaps = 24/567 (4%)
Query: 5 KQGDEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDE 64
K+ E + E +E + DE +++E A+ + E + D + EK +
Sbjct: 1335 KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKA--EEKKK 1392
Query: 65 VQSSEVLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDV 124
++ AE+D+ + E+ + ++ +K E E E + +E + D
Sbjct: 1393 ADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAE----EKKKADEAKKKAEEAKKADE 1448
Query: 125 VQSSEVLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENE 184
+ +K E + K +++ + E + ++ AEE ++ E
Sbjct: 1449 AKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
Query: 185 VQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEV 244
+ ++ + + + ++ + +E + ++ + +E + ++ L + E++K +E + +E
Sbjct: 1509 KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEE 1568
Query: 245 LAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEV 304
+ ++ + E+ ++ E EE E K E EE ++++ E+
Sbjct: 1569 AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKA---EEAKIKAEEL 1625
Query: 305 LAEEDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSEV 364
E+E K E L +K+ + + + +++ A ++ ++ E + +E + +E
Sbjct: 1626 KKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEE 1685
Query: 365 LAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDV----VQSSEVLAEEDEVQ 420
+K + E + K E++ ++ E+ ++ + ++ AEED+ +
Sbjct: 1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
Query: 421 SSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQ 480
+ E +++E + L +++E ++ E+ EK+ V E+ E + + KD+
Sbjct: 1746 AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFD 1805
Query: 481 SSEVLAEKDVE--------QSSEVLAEKDVVQSSE-VLAEKDVVQSSEVLSEKNEVQSSE 531
+ + E E + E A K+V S L E D + + KN +
Sbjct: 1806 NFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKF--NKNNENGED 1863
Query: 532 VLVEKSPLKETDIKEEAEKDEVQSSEV 558
E KE D+KE+ E++ ++ E+
Sbjct: 1864 GNKEADFNKEKDLKEDDEEEIEEADEI 1890
Score = 55.5 bits (133), Expect = 7e-08
Identities = 106/611 (17%), Positives = 270/611 (44%), Gaps = 16/611 (2%)
Query: 5 KQGDEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDE 64
++ +E+ +D ++ ++E ++ E ++A ++ V E+ + +E + +E
Sbjct: 1188 RKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEE 1247
Query: 65 VQSSEVLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDV 124
+++E + + +E + + + +++ E + ++ E E ++ E ++
Sbjct: 1248 ERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEA 1307
Query: 125 VQSSEVLTEKDEVQSSEVLAEKDVE---QSGEVLTEKDEVQNSEVLAEENVVQSSEVLAE 181
+ +E + DE + A+K + + E + E +E A + +++E AE
Sbjct: 1308 KKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAE 1367
Query: 182 ENEVQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQS 241
E + E A+K + + + EK + ++ AE+D+ + E+ +K DE +
Sbjct: 1368 AAEKKKEE--AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKK 1425
Query: 242 SEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQS 301
EK + AEE + E+ K+ E + +E + ++ ++ E
Sbjct: 1426 KA--EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK 1483
Query: 302 SEVLAEEDEVKSSEVLAEKDEV-QSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEEDEVQ 360
A+E + K+ E + DE +++E + DE + +E + DE + +E + DE +
Sbjct: 1484 K---ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAK 1540
Query: 361 SSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQ 420
+E + DE++ +E L + + + ++ + +E ++ + ++ ++ E EE
Sbjct: 1541 KAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKL 1600
Query: 421 SSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQ 480
E K E E+ ++++ E+ ++E + E L +K+A + + K +
Sbjct: 1601 YEEEKKMKAEEAKKA---EEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEE 1657
Query: 481 SSEVLAEKDVEQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLSEKNEVQSSEVLVEKSPLK 540
+++ A ++ +++ E + + + +E +K + E + + + + K
Sbjct: 1658 ENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
Query: 541 ETDIK--EEAEKDEVQSSEVLAEKDVVQSSEVLAEKVVEQSSEVLAEKDVVQSSEVLAEK 598
++K EE K + + ++ AE+D ++ E ++ ++ L +++ ++ E+ EK
Sbjct: 1718 AEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
Query: 599 DVVQSSEVLSE 609
+ V E+ E
Sbjct: 1778 EAVIEEELDEE 1788
Score = 54.4 bits (130), Expect = 2e-07
Identities = 87/570 (15%), Positives = 250/570 (43%), Gaps = 32/570 (5%)
Query: 8 DEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDEVQS 67
+E + +E + +E ++ ++ E K E + +E + + + +E + ++ +
Sbjct: 1094 EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKR 1153
Query: 68 SEVLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSS-EVSAKKEVIQSSEVLSEEDVVQ 126
E+ + ++ + +E + ++ + +E + +EV+ + E+ ++ ++ E+ +
Sbjct: 1154 VEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERK 1213
Query: 127 SSEVLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQ 186
+ E +D ++ V ++ ++ E + +E +N+E + + + + + ++
Sbjct: 1214 AEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIK 1273
Query: 187 SSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLA 246
+ E + ++ L + +E + ++ + +E + ++ +K E K+ + +
Sbjct: 1274 AEE-------ARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEE 1326
Query: 247 EKGVVQSCEVLAEE----DEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQ-- 300
K + + AEE E +E A DE +++E AE E + E + D +
Sbjct: 1327 AKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK 1386
Query: 301 --------SSEVLAEEDEVKSSEV-LAEKDEVQSSEVLAENDEVQNSEVLAEKDE--VQS 349
++ AEED+ K+ E+ A + ++ E + +E + ++ +K E ++
Sbjct: 1387 AEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA 1446
Query: 350 SEVLAEEDEVQSSEVLAEKDEV-----QSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEK 404
E + +E + +E +K E ++ + E +K AEE + ++ E
Sbjct: 1447 DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA 1506
Query: 405 DVVQSSEVLAEEDEVQSSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEK 464
+ + ++ + +E + ++ + +E + ++ + +E + ++ L + +E++ +E +
Sbjct: 1507 EAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKA 1566
Query: 465 DAVQSSEVLAEKDVVQSSEV--LAEKDVEQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLS 522
+ + +E + ++ E E +E+ ++ E+ +++ E ++ +E L
Sbjct: 1567 EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELK 1626
Query: 523 EKNEVQSSEVLVEKSPLKETDIKEEAEKDE 552
+ E + ++K +E EE +K E
Sbjct: 1627 KAEEEKKKVEQLKKKEAEEKKKAEELKKAE 1656
Score = 53.2 bits (127), Expect = 4e-07
Identities = 89/596 (14%), Positives = 256/596 (42%), Gaps = 15/596 (2%)
Query: 32 SEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDEVQSSEVLAEKDEVQNSEVLAEKDEVQS 91
E K E + +E E+ ++ E + ++ + +E + ++ + +E + ++ +
Sbjct: 1094 EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKR 1153
Query: 92 SEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSEVLTEKDEVQSSEVLAEKDVEQS 151
E+ + ++ + +E + K E + +E + + V+ +E L + ++ + +E + + E+
Sbjct: 1154 VEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERK 1213
Query: 152 GEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAEKDVEQSSEVLAEKDEVQN 211
E + ++ + +E + + + A++ E + + K E A +
Sbjct: 1214 AEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIK 1273
Query: 212 SEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLAE 271
+E + DE++ +E + +E +K +E + ++ +K A+E + ++ E +
Sbjct: 1274 AEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAK---KADEAKKKAEEAKKK 1330
Query: 272 EDEV-KSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQSSEVLA 330
D K +E + E +E A DE +++E AE E K E + D +
Sbjct: 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKA--E 1388
Query: 331 ENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSEVLAEK-DEVQSSEVLA----EKDVVQS 385
E + ++ AE+D+ ++ E+ + ++ +K +E + ++ E
Sbjct: 1389 EKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448
Query: 386 SKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKDEVQNSEV----LVEKD 441
+K AEE + ++ ++ E + +E + ++ +K E + +
Sbjct: 1449 AKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
Query: 442 EVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQSSEVLAEKDVEQSSEVLAEKD 501
+ ++ E ++ ++ E ++A ++ E ++ ++ E+ ++++++ E ++
Sbjct: 1509 KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEE 1568
Query: 502 VVQSSEVLAEKDVVQSSEVLSEKNEVQSSEVLVEKSPLKETDIKEEAEKDEVQSSEVLAE 561
++ E +E+ ++ L E+ + + ++AE+ ++++ E+
Sbjct: 1569 AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA 1628
Query: 562 KDVVQSSEVLAEKVVEQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLSEKNEVQSSE 617
++ + E L +K E+ + K + +++ A ++ ++ E + E + +E
Sbjct: 1629 EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAE 1684
Score = 39.4 bits (91), Expect = 0.007
Identities = 56/357 (15%), Positives = 148/357 (41%), Gaps = 4/357 (1%)
Query: 222 QNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVL 281
N A + K +E + +E + ++ E + ++ + +E + ++ + +E
Sbjct: 1086 DNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEA 1145
Query: 282 AEKDEVQNSEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVL 341
+ ++ + E+ + ++ + +E + ++ K +E + +EV+ +E L + ++ + +E
Sbjct: 1146 RKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAA 1205
Query: 342 AEKDEVQSSEVLAEEDEVQSSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVL 401
+ +E + +E + ++ + +E + + +E + A+K + + + E
Sbjct: 1206 RKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF 1265
Query: 402 AEKDVVQSSEVLAEEDEVQSSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVL 461
A + +E + DE++ +E + DE + +E + DE + A+K + +
Sbjct: 1266 ARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAE 1325
Query: 462 AEKDAVQSSEVLAE----KDVVQSSEVLAEKDVEQSSEVLAEKDVVQSSEVLAEKDVVQS 517
K +++ AE +E A D +++E AE + E + D +
Sbjct: 1326 EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK 1385
Query: 518 SEVLSEKNEVQSSEVLVEKSPLKETDIKEEAEKDEVQSSEVLAEKDVVQSSEVLAEK 574
+K + + +K E A+K ++ + EK ++ AE+
Sbjct: 1386 KAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A
(vWA) domain [General function prediction only].
Length = 4600
Score = 41.9 bits (98), Expect = 0.001
Identities = 105/540 (19%), Positives = 220/540 (40%), Gaps = 49/540 (9%)
Query: 8 DEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDEVQS 67
D+ L E + + S+ DE ++ E+ + + V++E + S E + DE
Sbjct: 3834 DDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDLDE--- 3890
Query: 68 SEVLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQS 127
EV +++ NS L EK + +E + E +S+E SA S+++S+ED
Sbjct: 3891 -EVNDIPEDLSNS--LNEKLWDEPNEEDLLETEQKSNEQSAANN---ESDLVSKED---D 3941
Query: 128 SEVLTEKD-EVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQ 186
++ L +KD + + E DV E+ + E + E++ ++ +E E
Sbjct: 3942 NKALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDLDLPEDLKLDEKEGD 4001
Query: 187 SSEVLAEKDV------EQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQ 240
S+ +D+ E E AEKDE E E++ + ++ + ED+ +
Sbjct: 4002 VSKDSDLEDMDMEAADENKEEADAEKDEPMQDEDPLEENNTLDEDIQQDDFSDLAEDDEK 4061
Query: 241 SSEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQ 300
+E E+ V ++ E ED VKS E L E+ EV + + ++
Sbjct: 4062 MNEDGFEENVQENEEST--------------EDGVKSDEEL-EQGEVPEDQAIDNHPKMD 4106
Query: 301 SSEVLAE---EDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEED 357
+ A ++E ++ E +E+ + + N ++D E ++E D
Sbjct: 4107 AKSTFASAEADEENTDKGIVGENEELGEEDGVRGNGTADGEFEQVQEDTSTPKEAMSEAD 4166
Query: 358 EVQSSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEED 417
S ++ Q++ + +D+ +S ++ E + E+D+ AE+D
Sbjct: 4167 RQYQSLGDHLREWQQANRIHEWEDLTESQSQAFDDSEFMHVKEDEEEDLQALGN--AEKD 4224
Query: 418 EVQSSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKD 477
+++S +++DE N D + S+ + ++ + + L + + + E
Sbjct: 4225 QIKS----IDRDESANQ----NPDSMNSTNIAEDEADEVGDKQLQDGQDISDIKQTGEDT 4276
Query: 478 VVQS--SEVLAEKDVEQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLSEKNEVQSSEVLVE 535
+ S +EK E S + E ++ + + + + L K+E + ++ +E
Sbjct: 4277 LPTEFGSINQSEKVFELSEDEDIEDELPDYNVKITPAMPIDEARDLWNKHEDSTKQLSIE 4336
Score = 40.8 bits (95), Expect = 0.003
Identities = 86/415 (20%), Positives = 166/415 (40%), Gaps = 47/415 (11%)
Query: 211 NSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLA 270
+ L E D+++ + DE ++ E+ ++ V V++E + S E
Sbjct: 3827 ITNTLNEDDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQ 3886
Query: 271 EEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQSSEVLA 330
+ DE EV +++ NS DE ++L E E KS+E A +E
Sbjct: 3887 DLDE----EVNDIPEDLSNSLNEKLWDEPNEEDLL--ETEQKSNEQSAANNESDLVSKED 3940
Query: 331 ENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSE--------------------VLAEKDE 370
+N +++ + ++DE + S+ + +DE+Q L EK+
Sbjct: 3941 DNKALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDLDLPEDLKLDEKEG 4000
Query: 371 VQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKDE 430
S + E ++++ EE + + E + ++D ++ + L E+ + L E DE
Sbjct: 4001 DVSKDSDLEDMDMEAADENKEEADAEKDEPMQDEDPLEENNTLDEDIQQDDFSDLAEDDE 4060
Query: 431 VQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQSSEVLAEKDV 490
N + E VQ +E + +D V+S E L E+ V + + + + A +
Sbjct: 4061 KMNEDGFEE--NVQENEE-STEDGVKSDEEL-EQGEVPEDQAIDNHPKMDAKSTFASAEA 4116
Query: 491 EQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLSEKNEVQSSEVLVEKSPLKETD------- 543
++ + +K +V +E L E+D V+ + + E + K + E D
Sbjct: 4117 DEEN---TDKGIVGENEELGEEDGVRGNGTADGEFEQVQEDTSTPKEAMSEADRQYQSLG 4173
Query: 544 --IKEEAEKDEVQSSEVLAEKDVVQSSEVLAEKVVEQSSEVL-----AEKDVVQS 591
++E + + + E L E + V E E L AEKD ++S
Sbjct: 4174 DHLREWQQANRIHEWEDLTESQSQAFDDSEFMHVKEDEEEDLQALGNAEKDQIKS 4228
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed.
Length = 1068
Score = 41.6 bits (98), Expect = 0.001
Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 2/171 (1%)
Query: 370 EVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKD 429
+ E E + VQ V+AE + E + VV++ + EE V + E
Sbjct: 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV 910
Query: 430 EVQ-NSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQSSEVLAEK 488
V+ ++ + +V+ E D + EV + V + D+ +++E
Sbjct: 911 VVETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETA-DIEEAAETAEVV 969
Query: 489 DVEQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLSEKNEVQSSEVLVEKSPL 539
E VV E EV + + E +P+
Sbjct: 970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHATAPM 1020
Score = 41.2 bits (97), Expect = 0.002
Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 8/163 (4%)
Query: 334 EVQNSEVLAEKDEVQSSEVLAEEDEVQSSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEED 393
+ E E +EVQ V+AE + E + V++ + E+ VV + E
Sbjct: 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV 910
Query: 394 EV--QSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKDEVQNSEVLVE--KDEVQSSEVL 449
V EV+A V + +V+ E D + EV + V + ++ +++EV+
Sbjct: 911 VVETTHPEVIAA-PVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVV 969
Query: 450 AEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQSSEVLAEKDVEQ 492
+ EV + V E EV + E
Sbjct: 970 VAEPEVVAQPAAP---VVAEVAAEVETVTAVEPEVAPAQVPEA 1009
Score = 40.4 bits (95), Expect = 0.003
Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 3/158 (1%)
Query: 228 AEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEV 287
+ E ++ +EVQ V+AE V + E + V++ + EE V + E V
Sbjct: 853 VQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVV 912
Query: 288 QNSEVLAEEDEV-QSSEVLAEEDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDE 346
+ + V + +V+ E D + EV + V E E +++ + AE
Sbjct: 913 ETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVV--EPQDETADIEEAAETAEVVV 970
Query: 347 VQSSEVLAEEDEVQSSEVLAEKDEVQSSEVLAEKDVVQ 384
+ V V + + +A V +
Sbjct: 971 AEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPE 1008
Score = 40.4 bits (95), Expect = 0.003
Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 7/167 (4%)
Query: 430 EVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEKDVVQSSEVLAEKD 489
+ E E +EVQ V+AE + E + V++ + E+ VV + E
Sbjct: 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV 910
Query: 490 -VEQSSEVLAEKDVVQSSEVLAEKDVVQSSEVLSEKNEVQSSEVLVEKSPLKETDIKEEA 548
VE + + V + +V+ E DV + EV + +E +VE +
Sbjct: 911 VVETTHPEVIAAPVTEQPQVITESDVAVAQEV------AEHAEPVVEPQDETADIEEAAE 964
Query: 549 EKDEVQSSEVLAEKDVVQSSEVLAEKVVEQSSEVLAEKDVVQSSEVL 595
+ V + + + +A +V ++ +
Sbjct: 965 TAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATV 1011
Score = 39.6 bits (93), Expect = 0.005
Identities = 37/165 (22%), Positives = 56/165 (33%), Gaps = 8/165 (4%)
Query: 314 SEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSEVLAEKDEV-- 371
E E +EVQ V+AE E + V++ + EE V + E V
Sbjct: 855 VEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVET 914
Query: 372 QSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKDEV 431
EV+A V + +V+ E D A++ + V+ +DE E E EV
Sbjct: 915 THPEVIAA-PVTEQPQVITESDVAV-----AQEVAEHAEPVVEPQDETADIEEAAETAEV 968
Query: 432 QNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEK 476
+E V + + V E Q E E
Sbjct: 969 VVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEH 1013
Score = 38.5 bits (90), Expect = 0.011
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 5/157 (3%)
Query: 126 QSSEVLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEV 185
E E +EVQ V+AE V + E + V+ + EE VV + E V
Sbjct: 853 VQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVV 912
Query: 186 --QSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSE 243
EV+A V + +V+ E D EV + V E E ++++ E
Sbjct: 913 ETTHPEVIAA-PVTEQPQVITESDVAVAQEVAEHAEPVV--EPQDETADIEEAAETAEVV 969
Query: 244 VLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEV 280
V + V Q + E + V A E EV ++V
Sbjct: 970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
Score = 38.5 bits (90), Expect = 0.013
Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 11/169 (6%)
Query: 172 VVQSSEVLAEEN----EVQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVL 227
VV+ +V EE EVQ V+AE V + E + V+ + E+ V
Sbjct: 847 VVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQP 906
Query: 228 AEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEV 287
E V E EV+A V + +V+ E D + EV + V E E ++
Sbjct: 907 EEVVVV----ETTHPEVIAA-PVTEQPQVITESDVAVAQEVAEHAEPVV--EPQDETADI 959
Query: 288 QNSEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQSSEVLAENDEVQ 336
+ + AE + V V + + +A +
Sbjct: 960 EEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPE 1008
Score = 38.1 bits (89), Expect = 0.014
Identities = 34/170 (20%), Positives = 53/170 (31%), Gaps = 14/170 (8%)
Query: 252 QSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEEDEV 311
E E +EVQ V+AE + E + V+ + EE V + E V
Sbjct: 853 VQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVV 912
Query: 312 KSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSEVLAEKDEV 371
E EV+A + +V+ E D + EV + V E E ++
Sbjct: 913 ----------ETTHPEVIAA-PVTEQPQVITESDVAVAQEVAEHAEPVV--EPQDETADI 959
Query: 372 QSSEVLAEKDVVQSS-KVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQ 420
+ + AE V + V E EV +
Sbjct: 960 EEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA 1009
Score = 37.3 bits (87), Expect = 0.030
Identities = 32/156 (20%), Positives = 51/156 (32%), Gaps = 4/156 (2%)
Query: 76 EVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSEVLTEKD 135
+ E E +EVQ V++E + E V+++ + EE VV + E
Sbjct: 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV 910
Query: 136 EV--QSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAE 193
V EV+A V + +V+TE D EV V + + +++E
Sbjct: 911 VVETTHPEVIAA-PVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETAD-IEEAAETAEV 968
Query: 194 KDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAE 229
E V E EV
Sbjct: 969 VVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPA 1004
Score = 36.6 bits (85), Expect = 0.043
Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 8/163 (4%)
Query: 346 EVQSSEVLAEEDEVQSSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKD 405
+ E E +EVQ V+AE + E + VV++ + EE V + E
Sbjct: 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV 910
Query: 406 VVQSSEVLAEEDEV--------QSSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQS 457
VV+++ V +S + ++ V+ +DE E AE EV
Sbjct: 911 VVETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVV 970
Query: 458 SEVLAEKDAVQSSEVLAEKDVVQSSEVLAEKDVEQSSEVLAEK 500
+E +V + V E Q E E
Sbjct: 971 AEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEH 1013
Score = 35.0 bits (81), Expect = 0.15
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 4/153 (2%)
Query: 11 LAEKDEVQSSEVLSEKDEVQSSEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDEVQSSEV 70
E +EVQ V++E + E +++ + EE VV + E V+++
Sbjct: 858 QREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHP 917
Query: 71 LAEKDEV-QNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSE 129
V + +V+ E D + EV + V E + I+ + +E V + E
Sbjct: 918 EVIAAPVTEQPQVITESDVAVAQEVAEHAEPVV--EPQDETADIEEAAETAEVVVAE-PE 974
Query: 130 VLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQ 162
V+ + +EV AE + + E +V
Sbjct: 975 VVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVP 1007
Score = 31.9 bits (73), Expect = 1.4
Identities = 66/346 (19%), Positives = 114/346 (32%), Gaps = 43/346 (12%)
Query: 49 EEDVVQSSEVLAEKDEVQSSEVLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSA 108
+E E A E QS + +++ VQ +V + + Q L++K ++ S
Sbjct: 685 DEKRQAQQEAKALNVEEQSVQETEQEERVQ--QVQPRRKQRQ----LNQKVRIEQSVAEE 738
Query: 109 KKEVIQSSEVLSEEDVVQSSEVLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLA 168
+ V +E V + TE L + + + E+DE N+E
Sbjct: 739 AVAPVVEETVAAEPVVQEVPAPRTE---------LVKVPLPVVAQTAPEQDEENNAENRD 789
Query: 169 EENVVQSS---------------EVLAEENEVQS---------SEVLAEKDVEQSSEVLA 204
+ + S E QS S +A V V+
Sbjct: 790 NNGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIRYPVVR 849
Query: 205 EKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQ 264
+D E E +EVQ V+AE + V S+ V+ V V+ E + +
Sbjct: 850 PQD--VQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPE 907
Query: 265 SSEVLAEEDEVKSSEVLAEKDEV--QNSEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDE 322
V+ + + E+ +V ++ +A+E + V+ +DE E AE E
Sbjct: 908 EVVVVETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAE 967
Query: 323 VQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSEVLAEK 368
V +E + + V E Q E E
Sbjct: 968 VVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEH 1013
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger. [Transport and
binding proteins, Cations and iron carrying compounds].
Length = 1096
Score = 40.7 bits (95), Expect = 0.002
Identities = 53/264 (20%), Positives = 94/264 (35%), Gaps = 16/264 (6%)
Query: 98 KDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSEVLTEKDEVQSSEVLAEKDVEQSGEVLTE 157
E E E + S + Q E T+ + E+ AE+ EQ GE
Sbjct: 641 TGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGE---- 696
Query: 158 KDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAEKDVEQSSEVLAEKD--EVQNSEVL 215
E++ E + E E + +E E + + E + ++ E + +
Sbjct: 697 -GEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEV 755
Query: 216 AEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEV 275
+ + + +E E KEDE E+ A + E+ +E E E +
Sbjct: 756 ETEGDRKETEHEGETEAEGKEDE-DEGEIQAGEDG----EMKGDEGAEGKVE--HEGETE 808
Query: 276 KSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAE-EDEVKSSEVLAEKDEVQSSEVLAENDE 334
+ E ++ +DE E+ AE + E K E + S +E +E
Sbjct: 809 AGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVD-GGGGSDGGDSEEEE 867
Query: 335 VQNSEVLAEKDEVQSSEVLAEEDE 358
+ E E++E + E EE+E
Sbjct: 868 EEEEEEEEEEEEEEEEEEEEEENE 891
Score = 37.3 bits (86), Expect = 0.025
Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 11/259 (4%)
Query: 75 DEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSEVLTEK 134
E +++ ++ + +E E E E + E E SE ++ + E
Sbjct: 636 AEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEG 695
Query: 135 D-EVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAE 193
+ E+++ E + + E + E + +E E + E + +E E E +
Sbjct: 696 EGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGE---GEAEGK 752
Query: 194 KDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQS 253
+VE + ++ E + K++ E+ A ++ K DE +V E
Sbjct: 753 HEVETEGD--RKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAG 810
Query: 254 CEVLAEEDEVQSSEVLAEEDEVKSSEVLAE-KDEVQNSEVLAEE----DEVQSSEVLAEE 308
+ E ++ +DE E+ AE + E + E + D S E EE
Sbjct: 811 EKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEE 870
Query: 309 DEVKSSEVLAEKDEVQSSE 327
+E + E E++E + E
Sbjct: 871 EEEEEEEEEEEEEEEEEEE 889
Score = 34.6 bits (79), Expect = 0.19
Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 17/263 (6%)
Query: 206 KDEVQNSEVLAEK--DEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQS---CEVLAEE 260
K +V +E E+ +E + +N + E + KG +S +
Sbjct: 632 KGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKG 691
Query: 261 DEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEED-EVKSSEVLAE 319
++ E+ A+E + K E + +E EDE E+ E+ E E E
Sbjct: 692 EQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDE---GEIETGEEGEEVEDEGEGE 748
Query: 320 KDEVQSSEVLAENDE--VQNSEVLAEKDEVQSSEVLAEED-EVQSSE-----VLAEKDEV 371
+ E + E + K++ E+ A ED E++ E V E +
Sbjct: 749 AEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETE 808
Query: 372 QSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKDEV 431
+ E + +DE E+ AE + + S E++E
Sbjct: 809 AGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEE 868
Query: 432 QNSEVLVEKDEVQSSEVLAEKDE 454
+ E E++E + E E++E
Sbjct: 869 EEEEEEEEEEEEEEEEEEEEENE 891
Score = 32.7 bits (74), Expect = 0.74
Identities = 43/245 (17%), Positives = 86/245 (35%), Gaps = 18/245 (7%)
Query: 5 KQGDEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEAIQSSEVLAEEDVVQSSEVLAEKDE 64
+ G+E E ++ +E E + K E E+ A+E + E +
Sbjct: 658 ENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEH 717
Query: 65 VQSSEVLAEKDEVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDV 124
+E +DE E+++ E E ++ E K EV + +E
Sbjct: 718 EGETEAEGTEDE----------GEIETGEEGEEVEDEGEGEAEGKHEVETEGD--RKETE 765
Query: 125 VQSSEVLTEKDEVQSSEVLAEKDVEQSGE------VLTEKDEVQNSEVLAEENVVQSSEV 178
+ K++ E+ A +D E G+ V E + + E ++
Sbjct: 766 HEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADD 825
Query: 179 LAEENEVQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDE 238
++E E+ AE E + + +E++E + E E+ E ++E+E
Sbjct: 826 TEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEE 885
Query: 239 VQSSE 243
+
Sbjct: 886 EEEEN 890
Score = 29.6 bits (66), Expect = 7.1
Identities = 49/266 (18%), Positives = 93/266 (34%), Gaps = 18/266 (6%)
Query: 297 DEVQSSEVLAEEDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEE 356
E + + E+ + +E E E E AE + ++ E E+ AE
Sbjct: 636 AEAEHTGERTGEEGERPTEAEGENGEESGGE--AEQEGETETKGENE----SEGEIPAER 689
Query: 357 DEVQSSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEE 416
Q E E+++ E + + E E + +E E + + E + +E
Sbjct: 690 KGEQEGE-----GEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDE 744
Query: 417 DEVQ---SSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVL 473
E + EV E D + + E + E E + E+ ++ A E
Sbjct: 745 GEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVE-- 802
Query: 474 AEKDVVQSSEVLAEKDVEQSSEVLAEKDVVQSSEVLAEK--DVVQSSEVLSEKNEVQSSE 531
E + + E E ++ KD E+ AE + Q + + +
Sbjct: 803 HEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGD 862
Query: 532 VLVEKSPLKETDIKEEAEKDEVQSSE 557
E+ +E + +EE E++E + E
Sbjct: 863 SEEEEEEEEEEEEEEEEEEEEEEEEE 888
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen;
Provisional.
Length = 1136
Score = 37.1 bits (85), Expect = 0.031
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 138 QSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAEKDVE 197
+ +E E+D E++ E E++ +N E EENV ++ E EEN ++ E E++VE
Sbjct: 941 EHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVE 1000
Query: 198 QSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVL 257
++ E E++ +N E E+ + +N E + E E E+ V+ E AE+ V ++ E
Sbjct: 1001 ENIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEEIEENAEENVEENIEEN 1060
Query: 258 AEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEEDEVKSSEVL 317
EE + ++ E + E E E + E E +N E + E E E E E + E
Sbjct: 1061 IEEYDEENVEEIEENIEENIEENVEENVE-ENVEEIEENVEENVEENAEENAEENAEENA 1119
Query: 318 AEKDEVQSSEVLAENDE 334
E D+ E E DE
Sbjct: 1120 EEYDDENPEEHNEEYDE 1136
Score = 36.7 bits (84), Expect = 0.042
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 129 EVLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSS 188
E+ E+++ + +++ E E+D +N E AEENV ++ E EEN ++
Sbjct: 920 EINLINKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENV 979
Query: 189 EVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEK 248
E E++VE++ E E++ +N E E++ +N E E+ + + +EV+ + ++
Sbjct: 980 EENVEENVEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDE 1039
Query: 249 GVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEE 308
V+ E AEE+ ++ E EE + ++ E + E E +N E EE+ ++ E + E
Sbjct: 1040 ENVEEIEENAEENVEENIEENIEEYDEENVEEIEENIE-ENIEENVEENVEENVEEIEEN 1098
Query: 309 DEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDE 346
E E E E + E E D+ E E DE
Sbjct: 1099 VEENVEENAEENAEENAEENAEEYDDENPEEHNEEYDE 1136
Score = 35.1 bits (80), Expect = 0.13
Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 2/211 (0%)
Query: 105 EVSAKKEVIQSSEVLSEEDVVQSSEVLTEKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNS 164
E++ + +++ E + + +E E+D ++ E AE++VE++ E E++ +N
Sbjct: 920 EINLINKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENV 979
Query: 165 EVLAEENVVQSSEVLAEENEVQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNS 224
E EENV ++ E EEN ++ E E++VE++ E E+ + +N E + E E +
Sbjct: 980 EENVEENVEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDE 1039
Query: 225 EVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEK 284
E + E E +E+ ++ E E+ ++ E + E E E + E E E+ E+
Sbjct: 1040 ENVEEIEENAEENVEENIEENIEEYDEENVEEIEENIEENIEENVEENVEENVEEI--EE 1097
Query: 285 DEVQNSEVLAEEDEVQSSEVLAEEDEVKSSE 315
+ +N E AEE+ +++E AEE + ++ E
Sbjct: 1098 NVEENVEENAEENAEENAEENAEEYDDENPE 1128
Score = 30.5 bits (68), Expect = 3.5
Identities = 51/204 (25%), Positives = 105/204 (51%), Gaps = 2/204 (0%)
Query: 76 EVQNSEVLAEKDEVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSEVLTEKD 135
E++N + + +E E+D ++ E A++ V ++ E EE+V ++ E E++
Sbjct: 927 ELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEEN 986
Query: 136 EVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAEKD 195
++ E E++VE++ E E++ +N E EE ++ E + E E E + E
Sbjct: 987 VEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEE-- 1044
Query: 196 VEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCE 255
+E+++E E++ +N E E++ + E + E E E+ V+ + E+ V ++ E
Sbjct: 1045 IEENAEENVEENIEENIEEYDEENVEEIEENIEENIEENVEENVEENVEEIEENVEENVE 1104
Query: 256 VLAEEDEVQSSEVLAEEDEVKSSE 279
AEE+ +++E AEE + ++ E
Sbjct: 1105 ENAEENAEENAEENAEEYDDENPE 1128
Score = 29.8 bits (66), Expect = 6.3
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 88 EVQSSEVLSEKDEVQSSEVSAKKEVIQSSEVLSEEDVVQSSEVLTEKDEVQSSEVLAEKD 147
E+++ + + +E + +++ ++ E +EE+V ++ E E++ ++ E E++
Sbjct: 927 ELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEEN 986
Query: 148 VEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLAEKDVEQSSEVLAEKD 207
VE++ E E++ +N E EENV ++ E EE + ++ E + E E E + E +
Sbjct: 987 VEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEEIE 1046
Query: 208 EVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQSCEVLAEEDEVQSSE 267
E N+E E++ +N E E+N + E+ ++ + E+ V ++ E EE E E
Sbjct: 1047 E--NAEENVEENIEENIEEYDEENVEEIEENIEEN---IEENVEENVEENVEEIEENVEE 1101
Query: 268 VLAEEDEVKSSEVLAEKDEVQNSEVLAEEDE 298
+ E E + E E E + E E +E
Sbjct: 1102 NVEENAEENAEENAEENAEEYDDENPEEHNE 1132
>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.
Length = 509
Score = 34.6 bits (80), Expect = 0.19
Identities = 23/215 (10%), Positives = 75/215 (34%), Gaps = 2/215 (0%)
Query: 133 EKDEVQSSEVLAEKDVEQSGEVLTEKDEVQNSEVLAEENVVQSSEVLAEENEVQSSEVLA 192
+E+ AE++ ++ + L K + + + EE ++ +
Sbjct: 1 MTTASTKAELAAEEEAKKKLKKLAAKSKSK-GFITKEEIKEALESKKKTPEQIDQVLIFL 59
Query: 193 EKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEVLAEKGVVQ 252
V+ + + + ++ A+ + K+E+ + + L + +
Sbjct: 60 SGMVKDTDDATESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLN 119
Query: 253 SCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEEDEVK 312
+ + ++ + ++D++ ++ + D+ + E ++D E E E++
Sbjct: 120 YVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDDDDDVDDEDEEKKEAKELE 179
Query: 313 SSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEV 347
+ + A +++++ A D V
Sbjct: 180 KLSDDDDFVWD-EDDSEALRQARKDAKLTATADPV 213
>gnl|CDD|237284 PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase;
Reviewed.
Length = 460
Score = 32.6 bits (74), Expect = 0.60
Identities = 29/191 (15%), Positives = 62/191 (32%), Gaps = 18/191 (9%)
Query: 185 VQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNSEVLAEKNEVQKEDEVQSSEV 244
++ SE + ++ +E+ LA + + E N+ E +EV
Sbjct: 285 LRGSEYVVDEALEREPAELAAAAVASAASAVGPVGP-------GEPNQPDDVAEAVKAEV 337
Query: 245 LAEKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEV 304
V + V+ D S EE +SE E+++ + A +E
Sbjct: 338 AEVTDEVAAESVVQVADRDGESTPAVEE----TSEADIEREQPGDLAGQAPAAHQVDAEA 393
Query: 305 LAEEDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEVLAEEDEVQSSEV 364
+ E ++ DE E + + + + + + V D+ +
Sbjct: 394 ASAAPEEPAALASEAHDE-------TEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEPDG 446
Query: 365 LAEKDEVQSSE 375
+ +D+ S
Sbjct: 447 IRRQDDFSSRR 457
Score = 30.7 bits (69), Expect = 2.6
Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 9/129 (6%)
Query: 107 SAKKEVIQSSEVLSEEDVVQSSEVLTEKDEVQSSEVLAEKDVE--QSGEVLTEKDEVQNS 164
+ K EV + ++ ++ E VVQ ++ E + E +E D+E Q G++ +
Sbjct: 332 AVKAEVAEVTDEVAAESVVQVADRDGES--TPAVEETSEADIEREQPGDLAGQAPAAHQV 389
Query: 165 EVLAEENVVQSSEVLAEENEVQSSEVLAEKDVEQSSEVLAEKDEVQNSEVLAEKDEVQNS 224
+ AE E A +E E +V + + + + + V D+
Sbjct: 390 D--AEAASAAPEEPAALASEAHDET---EPEVPEKAAPIPDPAKPDELAVAGPGDDPAEP 444
Query: 225 EVLAEKNEV 233
+ + +++
Sbjct: 445 DGIRRQDDF 453
>gnl|CDD|223716 COG0643, CheA, Chemotaxis protein histidine kinase and related
kinases [Cell motility and secretion / Signal
transduction mechanisms].
Length = 716
Score = 30.4 bits (69), Expect = 3.6
Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 10/226 (4%)
Query: 258 AEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLAEEDEVKSSEVL 317
EED+ ++LA+ D + E A E + + E V + E L
Sbjct: 112 DEEDDADLLDLLAQ-LAAGEGLEPGAADAEEAEEEAAVEPALAALNEELSEGLVPALE-L 169
Query: 318 AEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSSEV--LAEEDEVQSSEVLAEKDEVQSSE 375
E + ++ E L E ++S+ L EE E E+ A +++ E
Sbjct: 170 PEAEAAAAAAPELEAPPYAIDVALEEDAPLKSARAALLLEELEELGEEIAATLPDLEDLE 229
Query: 376 VLAEKDVVQSSKVLAEEDEVQSSEVL-----AEKDVVQSSEVLAEEDEVQSSEVLVEKDE 430
A + + + E+DE +VL AE+ + + E+ AE E+ SE +
Sbjct: 230 AEAAFEESEV-VLATEQDEELIRDVLELVVEAEELEIAAVELDAELLELAESEQAADDVL 288
Query: 431 VQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSSEVLAEK 476
+E L EK +++++ A + + A A S V EK
Sbjct: 289 AAQAEPLAEKSAAEAAKLSALEAAPAAKAAAAAAGASSSIRVDVEK 334
>gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase.
Length = 639
Score = 29.4 bits (66), Expect = 6.1
Identities = 22/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 348 QSSEVLAEEDEVQSSEVLAEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVV 407
+SS L E + S+ ++ E S ++L +K ++VL+ D+ S+ + +
Sbjct: 62 ESSSSLKEPIGIVYSDNSSKTIEPDSQDLLLDKRGEHKARVLSATDDDTHSQ--TDDIIK 119
Query: 408 QSSEVLAEEDEVQSSEVLVEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQS 457
Q ++ ++D Q + + Q + + Q+SE + EK+ + +
Sbjct: 120 QVTQKAGQDDSDQQEKNSQSQSASQAESLEHVQQSAQTSEKVDEKEPLLT 169
>gnl|CDD|130902 TIGR01843, type_I_hlyD, type I secretion membrane fusion protein,
HlyD family. Type I secretion is an ABC transport
process that exports proteins, without cleavage of any
signal sequence, from the cytosol to extracellular
medium across both inner and outer membranes. The
secretion signal is found in the C-terminus of the
transported protein. This model represents the adaptor
protein between the ATP-binding cassette (ABC) protein
of the inner membrane and the outer membrane protein,
and is called the membrane fusion protein. This model
selects a subfamily closely related to HlyD; it is
defined narrowly and excludes, for example, colicin V
secretion protein CvaA and multidrug efflux proteins
[Protein fate, Protein and peptide secretion and
trafficking].
Length = 423
Score = 29.2 bits (66), Expect = 6.5
Identities = 54/273 (19%), Positives = 113/273 (41%), Gaps = 28/273 (10%)
Query: 247 EKGVVQSCEVLAEEDEVQSSEVLAEEDEVKSSEVLAEKDEVQNSEVLAEEDEVQSSEVLA 306
E G+V+ V E D V++ +VL E D +V A+ E+++ + E + +
Sbjct: 50 EGGIVREILV-REGDRVKAGQVLVELDAT---DVEADAAELESQVLRLEAEVARLRAEAD 105
Query: 307 EEDEVKSSEVLAEKDEVQSSEVLAENDEVQNSEVLAEKDEVQSS-EVLAEEDEVQSSEVL 365
+ ++ + L ++ E++ Q S + K +++ E++ + + +E+
Sbjct: 106 SQAAIEFPDDLLSAEDPAVPELIKG----QQSLFESRKSTLRAQLELILAQIKQLEAELA 161
Query: 366 AEKDEVQSSEVLAEKDVVQSSKVLAEEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVL 425
+ ++Q+ E +E+++ L EK +V E+L E E ++
Sbjct: 162 GLQAQLQALRQQLE----------VISEELEARRKLKEKGLVSRLELLELERERAEAQGE 211
Query: 426 VEKDEVQNSEVLVEKDEVQSSEVLAEKDEVQSSEVLAEKDAVQSS------EVLAEKDVV 479
+ + E + + + DE+Q + ++ EVL E Q+ + +D +
Sbjct: 212 LGRLEAELEVLKRQIDELQ--LERQQIEQTFREEVLEELTEAQARLAELRERLNKARDRL 269
Query: 480 QSSEVLAEKD-VEQSSEVLAEKDVVQSSEVLAE 511
Q + + D QS +V VVQ E L E
Sbjct: 270 QRLIIRSPVDGTVQSLKVHTVGGVVQPGETLME 302
>gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase.
Length = 1036
Score = 29.1 bits (65), Expect = 9.9
Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 391 EEDEVQSSEVLAEKDVVQSSEVLAEEDEVQSSEVLVEKDEVQNSEVLVEKDEVQSSEVLA 450
+ED S+ L+ V ++S EE +V E +E +E ++ QS
Sbjct: 34 KEDSSTSTSSLSVSAVEKTSNA-KEEIQVDFQHNSESAVEEVEAEDEIEVEQNQS----- 87
Query: 451 EKDEVQSSEVLAEKDAVQSSEVLAEKDVVQSSEVLAEKDVEQSSEVLAEKDVVQSSEVLA 510
D ++SS ++ E+ + + + + + ++ E ++ E LAE++ + +++
Sbjct: 88 --DVLKSSSIVKEESISTDMDGIDDDSLDRKLKLERENLRKREIEELAEENFSRGNKLFV 145
Query: 511 EKDVVQSSEVL 521
VV+ +
Sbjct: 146 YPQVVKPDSDI 156
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.289 0.111 0.246
Gapped
Lambda K H
0.267 0.0699 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 28,216,208
Number of extensions: 2810170
Number of successful extensions: 2596
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1742
Number of HSP's successfully gapped: 476
Length of query: 634
Length of database: 10,937,602
Length adjustment: 103
Effective length of query: 531
Effective length of database: 6,369,140
Effective search space: 3382013340
Effective search space used: 3382013340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 45 (21.9 bits)
S2: 62 (27.7 bits)