BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9316
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29RH4|THOC3_BOVIN THO complex subunit 3 OS=Bos taurus GN=THOC3 PE=2 SV=1
Length = 351
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 116/214 (54%), Gaps = 18/214 (8%)
Query: 38 FNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97
F H+ +E+ AH +KVHSVAWSCDGRRLASGSFDK+ ++F L+K L KE YRGH
Sbjct: 42 FRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKD-RLVKENNYRGHGD 100
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVA------IFALDK 151
SVDQLCWH +NPDL TASGDKT+RIWD RT K + + + ++ A+
Sbjct: 101 SVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGN 160
Query: 152 KGDLNKEVVYRGHTG--------SVDQLCWHATNPDLLSTASGDKTVRIWDARTQK--SQ 201
K D+ + + H V+++ W+ N ++ +G+ + I K
Sbjct: 161 KDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDN-NMFFLTNGNGCINILSYPELKPVQS 219
Query: 202 IIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
I A I I + P G A G+ + LV+ DV
Sbjct: 220 INAHPSNCICIKFDPMGKYFATGSADALVSLWDV 253
>sp|Q8VE80|THOC3_MOUSE THO complex subunit 3 OS=Mus musculus GN=Thoc3 PE=2 SV=1
Length = 351
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 116/214 (54%), Gaps = 18/214 (8%)
Query: 38 FNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97
F H+ +E+ AH +KVHSVAWSCDGRRLASGSFDK+ ++F L+K L KE YRGH
Sbjct: 42 FRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKD-RLVKENNYRGHGD 100
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVA------IFALDK 151
SVDQLCWH +NPDL TASGDKT+RIWD RT K + + + ++ A+
Sbjct: 101 SVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGN 160
Query: 152 KGDLNKEVVYRGHTG--------SVDQLCWHATNPDLLSTASGDKTVRIWDARTQK--SQ 201
K D+ + + H V+++ W+ N ++ +G+ + I K
Sbjct: 161 KDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDN-NMFFLTNGNGCINILSYPELKPVQS 219
Query: 202 IIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
I A I I + P G A G+ + LV+ DV
Sbjct: 220 INAHPSNCICIKFDPMGKYFATGSADALVSLWDV 253
>sp|Q96J01|THOC3_HUMAN THO complex subunit 3 OS=Homo sapiens GN=THOC3 PE=1 SV=1
Length = 351
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 116/214 (54%), Gaps = 18/214 (8%)
Query: 38 FNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97
F H+ +E+ AH +KVHSVAWSCDGRRLASGSFDK+ ++F L+K L KE YRGH
Sbjct: 42 FRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKD-RLVKENNYRGHGD 100
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVA------IFALDK 151
SVDQLCWH +NPDL TASGDKT+RIWD RT K + + + ++ A+
Sbjct: 101 SVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGN 160
Query: 152 KGDLNKEVVYRGHTG--------SVDQLCWHATNPDLLSTASGDKTVRIWDARTQK--SQ 201
K D+ + + H V+++ W+ N ++ +G+ + I K
Sbjct: 161 KDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDN-NMFFLTNGNGCINILSYPELKPVQS 219
Query: 202 IIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
I A I I + P G A G+ + LV+ DV
Sbjct: 220 INAHPSNCICIKFDPMGKYFATGSADALVSLWDV 253
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 48/272 (17%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P+ L SGS V + N+ + +Q H S V+SV ++ DG LASGS D
Sbjct: 1209 NPDGSTLASGSSDQTV-----RLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSD 1263
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 130
K+V ++ + L+ ++GHT V+ + A NPD +L++ SGD+TVR+W+ + K
Sbjct: 1264 KTVRLWDISSSKCLH---TFQGHTNWVNSV---AFNPDGSMLASGSGDQTVRLWEISSSK 1317
Query: 131 SQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
MLASGS D++V ++++ L + GHT V +
Sbjct: 1318 CLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECL---YTFLGHTNWVGSV 1374
Query: 172 CWHATNPD--LLSTASGDKTVRIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNK 226
+ +PD +L++ SGD+TVR+W + K + +G N +I ++P+G +A G+
Sbjct: 1375 IF---SPDGAILASGSGDQTVRLWSISSGKC-LYTLQGHNNWVGSIVFSPDGTLLASGSD 1430
Query: 227 EDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
+ V ++ E T GH+ RS+
Sbjct: 1431 DQTVRLWNISSG----ECLYTLHGHINSVRSV 1458
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 36/245 (14%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ KL +G +V T ++ + H S V+SV +S DG+ LASGS D
Sbjct: 873 SPDGKLFATGDSGGIV-----RFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDD 927
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132
++V ++ + L ++GHT V + + + N +L++ S D+TVR+WD + +
Sbjct: 928 QTVRLWDISSGQCLK---TFKGHTSRVRSVVF-SPNSLMLASGSSDQTVRLWDISSGECL 983
Query: 133 I-------------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 173
MLA+GS D++V ++ + +++GHT V + +
Sbjct: 984 YIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCF---YIFQGHTSCVRSVVF 1040
Query: 174 HATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLV 230
+++ +L++ S D+TVR+WD + + +G ++ ++P+G +A G + +V
Sbjct: 1041 -SSDGAMLASGSDDQTVRLWDISSGNC-LYTLQGHTSCVRSVVFSPDGAMLASGGDDQIV 1098
Query: 231 TFIDV 235
D+
Sbjct: 1099 RLWDI 1103
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 39/215 (18%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
+Q H S V SV +S DG LASGS D++V ++ + N +GHT V + +
Sbjct: 1028 FQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSG---NCLYTLQGHTSCVRSVVF-- 1082
Query: 107 TNPD--LLSTASGDKTVRIWDART-------------------QKSQIMLASGSFDKSVA 145
+PD +L++ D+ VR+WD + + + LA+GS D+ V
Sbjct: 1083 -SPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVR 1141
Query: 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQII 203
++ + K L +GHT V+ + A +PD L++ SGD+TVR+WD + K I
Sbjct: 1142 LWDISSKKCL---YTLQGHTNWVNAV---AFSPDGATLASGSGDQTVRLWDISSSKCLYI 1195
Query: 204 A---TKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
T N ++ + P+G+T+A G+ + V ++
Sbjct: 1196 LQGHTSWVN-SVVFNPDGSTLASGSSDQTVRLWEI 1229
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 41/221 (18%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P+ +L SGS V + ++ + +Q H S V SV +S DG LASGS D
Sbjct: 1293 NPDGSMLASGSGDQTV-----RLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDD 1347
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 130
++V ++++ L + GHT V + + +PD +L++ SGD+TVR+W + K
Sbjct: 1348 QTVRLWSISSGECL---YTFLGHTNWVGSVIF---SPDGAILASGSGDQTVRLWSISSGK 1401
Query: 131 SQI-------------------MLASGSFDKSVAIFALDKKGDLNKEVVY--RGHTGSVD 169
+LASGS D++V ++ + + E +Y GH SV
Sbjct: 1402 CLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNIS-----SGECLYTLHGHINSVR 1456
Query: 170 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENI 210
+ + +++ +L++ S D+T+++WD +T + I K E I
Sbjct: 1457 SVAF-SSDGLILASGSDDETIKLWDVKTGEC-IKTLKSEKI 1495
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHG--SKVHSVAWSCDGRRLASGS 70
SP+ LL SGS D V+ +N + Y HG + V SVA+S DG LASGS
Sbjct: 1419 SPDGTLLASGSD-------DQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGS 1471
Query: 71 FDKSVAIFALDKKGD----LNKEVVYRG 94
D+++ ++ + K G+ L E +Y G
Sbjct: 1472 DDETIKLWDV-KTGECIKTLKSEKIYEG 1498
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 38/239 (15%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHN--DIKEYQAHGSKVHSVAWSCDGRRLASGS 70
+P+ L+ +GS +D K +N N ++ + H +++ S++++ G R+ +GS
Sbjct: 186 NPQSTLVATGS-------MDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGS 238
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGH-----------------TGSVDQLC--WHATNPDL 111
FD +V ++ D G +N + GH TGS+D+ C W ATN
Sbjct: 239 FDHTVVVWDADTGGKVN---ILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNGKC 295
Query: 112 LSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
++T +G I D+ + ++A+ S D + IF+ + + K GH G + ++
Sbjct: 296 VATLTGHDD-EILDSCFDYTGKLIATASADGTARIFSAATRKCIAK---LEGHEGEISKI 351
Query: 172 CWHATNPDLLSTASGDKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKED 228
++ LL T S DKT RIWDA+T Q Q++ + I + T+ GN + G+K++
Sbjct: 352 SFNPQGNRLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNYKGNIVITGSKDN 409
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
K +AH + +VA + G +GS+D++ ++ +LN GH V +
Sbjct: 85 FKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELN---TLEGHRNVVYAIA 141
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSV 144
++ D +T S DKT ++W T K ++A+GS D +
Sbjct: 142 FNNPYGDKTATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 145 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 197
++ + ++ RGH+ + L ++ T+ D + T S D TV +WDA T
Sbjct: 202 KLWNIQNGEEV---CTLRGHSAEIISLSFN-TSGDRIITGSFDHTVVVWDADT 250
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
KS +GS+D++ ++ +LN GH V + ++ D +T S DKT
Sbjct: 102 KSGSCFITGSYDRTCKLWDTASGEELN---TLEGHRNVVYAIAFNNPYGDKTATGSFDKT 158
Query: 190 VRIWDARTQKS--QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLT 247
++W T K E + +++ P +A G+ + ++ E T
Sbjct: 159 CKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNG----EEVCT 214
Query: 248 SRGHLMETRSL 258
RGH E SL
Sbjct: 215 LRGHSAEIISL 225
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V V S ASGS D++ +++ D+
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTY 417
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM---------- 134
L +Y GH VD + +H N + L+T S DKTVR+W A+ S +
Sbjct: 418 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 135 ---------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLST 183
LAS D+ + ++ L G L KE+ RGHT S+ L A +PD L+++
Sbjct: 474 LSFSPNGKYLASAGEDQRLKLWDL-ASGTLFKEL--RGHTDSITSL---AFSPDSGLIAS 527
Query: 184 ASGDKTVRIWDARTQKSQIIA--TKGENINITWAPNGNTIAV 223
AS D +VR+WD R+ A + GE + + N ++V
Sbjct: 528 ASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSV 569
>sp|Q7PS24|CIAO1_ANOGA Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3
Length = 341
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 24/145 (16%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKK-GDLNKEVVYRGHTGSVDQLCWHAT 107
H + +AWSC G LAS SFD +VA++ DKK G+ GH V + W +
Sbjct: 58 GHTRTIRELAWSCCGHYLASASFDTTVAVW--DKKSGEFECNATLEGHDNEVKSVTW-SR 114
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
+ +LL+T S DK+V IW+ A D++ + V GHT
Sbjct: 115 SGNLLATCSRDKSVWIWEIH-------------------HAPDQEDEYECVAVLNGHTQD 155
Query: 168 VDQLCWHATNPDLLSTASGDKTVRI 192
V ++CWH DLL++AS D T+R+
Sbjct: 156 VKKVCWHP-QEDLLASASYDNTIRM 179
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 42/185 (22%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIF----ALDKKGDLNKEVVYRGHTGSVDQLC 103
+ H ++V SV WS G LA+ S DKSV I+ A D++ + V GHT V ++C
Sbjct: 101 EGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVC 160
Query: 104 WHATNPDLLSTASGDKTVR-----------------------IWDARTQKSQIMLASGSF 140
WH DLL++AS D T+R +W + LAS S
Sbjct: 161 WHP-QEDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSE 219
Query: 141 DKSVAIF-----------ALDKKGDLNKEVVYRG--HTGSVDQLCWHATNPDLLSTASGD 187
D +V ++ +G + K V H+ SV + W LL+TA GD
Sbjct: 220 DTTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDW-CKQTGLLATACGD 278
Query: 188 KTVRI 192
TVRI
Sbjct: 279 DTVRI 283
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ ++H S V S+++ G+RLAS S D +V ++ + G N + G++
Sbjct: 192 LEPLESHSSTVWSISFDATGQRLASCSEDTTVKVW--QQYGPDNALGIPCPDRGTI---- 245
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKE----- 158
W + T SG + ++D K +LA+ D +V IF D N+
Sbjct: 246 WKC-----VCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREASDSDRNEPTFELV 300
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
V H+ +++ WH T P LL TAS D +++W
Sbjct: 301 VTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLW 335
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQL 102
++ H +V S AW G+ AS DK++ ++ D + + V+ GHT ++ +L
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIREL 66
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKK-GDLNKEVVY 161
W LAS SFD +VA++ DKK G+
Sbjct: 67 AWSCCGH------------------------YLASASFDTTVAVW--DKKSGEFECNATL 100
Query: 162 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GH V + W + + +LL+T S DK+V IW+
Sbjct: 101 EGHDNEVKSVTW-SRSGNLLATCSRDKSVWIWE 132
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 46/237 (19%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDGRRLASGS 70
SP+ ++L S C D+ VK ++ + IK H +V SVA+ DG LAS S
Sbjct: 693 SPDGEILAS-------CGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASAS 745
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDA-- 126
DK++ ++ D+ + TG D + A +PD L++++ D T+++WD
Sbjct: 746 GDKTIKLW------DIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQ 799
Query: 127 ----RTQKSQI-------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 169
RT KS LASGS D+++ I+ G+ K Y GHT SV
Sbjct: 800 GKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNY-HTGECLK--TYIGHTNSVY 856
Query: 170 QLCWHATNPD--LLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAPNGNTIA 222
+ A +PD +L + SGD+T+++WD +T + E ++ ++P+G T+A
Sbjct: 857 SI---AYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLA 910
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 50/236 (21%)
Query: 6 IQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDG 63
+ FH P+ K++ +GS D VK +N T +K H K+ +AWS DG
Sbjct: 1026 VVFH----PQGKIIATGSA-------DCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDG 1074
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123
+ LAS S D+SV ++ + + RGH+ V + + N ++++T S D+TV+I
Sbjct: 1075 QLLASASADQSVRLWDCCTGRCVG---ILRGHSNRVYSAIF-SPNGEIIATCSTDQTVKI 1130
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LL 181
WD + K L GHT V + A +PD +L
Sbjct: 1131 WDWQQGKCLKTLT--------------------------GHTNWVFDI---AFSPDGKIL 1161
Query: 182 STASGDKTVRIWDARTQKSQIIATKGENI--NITWAPNGNTIAVGNKEDLVTFIDV 235
++AS D+TVRIWD T K I ++ ++ ++P+G +A G+++ V +V
Sbjct: 1162 ASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNV 1217
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 39/231 (16%)
Query: 32 DDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE 89
D +K +N H +K Y H + V+S+A+S D + L SGS D+++ ++ D
Sbjct: 831 DRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLW------DCQTH 884
Query: 90 VVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKS---------------- 131
+ + G +++C A +PD L+ S D++VR+W+ RT +
Sbjct: 885 ICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAF 944
Query: 132 ---QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASG 186
+ +LASGS DK+V ++ ++ GHT + + A +PD L++AS
Sbjct: 945 SPDRQILASGSNDKTVKLWDWQTGKYISS---LEGHTDFIYGI---AFSPDSQTLASAST 998
Query: 187 DKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDV 235
D +VR+W+ T Q QI+ + + + + P G IA G+ + V ++
Sbjct: 999 DSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNI 1049
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 27/212 (12%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ ++H V SVA+S DG+ LASGS D+++ I+ G+ K Y GHT SV +
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNY-HTGECLK--TYIGHTNSVYSI- 858
Query: 104 WHATNPD--LLSTASGDKTVRIWDART---------QKSQIMLASGSFD-KSVAIFALDK 151
A +PD +L + SGD+T+++WD +T +++ + S D +++A +LD+
Sbjct: 859 --AYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQ 916
Query: 152 KGDL---NKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIATK 206
L + G+ D A +PD +L++ S DKTV++WD +T K I + +
Sbjct: 917 SVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGK-YISSLE 975
Query: 207 GEN---INITWAPNGNTIAVGNKEDLVTFIDV 235
G I ++P+ T+A + + V ++
Sbjct: 976 GHTDFIYGIAFSPDSQTLASASTDSSVRLWNI 1007
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 38/245 (15%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDGRRLASGS 70
SPE +LL + C D +V+ + + + + H + V V +S DG LAS
Sbjct: 651 SPEGQLLAT-------CDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCG 703
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
D++V ++++ + G K + GH V + +H + + L++ASGDKT+++WD +
Sbjct: 704 ADENVKLWSV-RDGVCIKTLT--GHEHEVFSVAFHP-DGETLASASGDKTIKLWDIQDGT 759
Query: 131 S-QIM------------------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
Q + LAS + D ++ ++ + + L + HTG V +
Sbjct: 760 CLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLR---TLKSHTGWVRSV 816
Query: 172 CWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAPNGNTIAVGNKEDL 229
+ A + L++ SGD+T++IW+ T + I +I ++P+ + G+ +
Sbjct: 817 AFSA-DGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRT 875
Query: 230 VTFID 234
+ D
Sbjct: 876 IKLWD 880
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 40/249 (16%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGS 70
SP K + SGS +D V +N + Y+ G K V V +S LAS S
Sbjct: 27 SPSGKQIASGS-------VDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSS 79
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DK+V ++ KG+ V++R HTGSV +C+ A LL TAS D+++++W QK
Sbjct: 80 RDKTVRLWVPSVKGE---SVLFRAHTGSVRSVCFSADGQSLL-TASDDQSIKLWSVHRQK 135
Query: 131 --------------------SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
Q+M+ S S D++V ++ + ++ G++ VD
Sbjct: 136 IICTLREHNNWVRCARFSPDGQLMV-SVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVD- 193
Query: 171 LCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN-ITWAPNGNTIAVGNKED 228
+H ++ ++TAS D TVR+WD RT Q +N +++ P+GN + + +
Sbjct: 194 --FHPSST-CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDS 250
Query: 229 LVTFIDVVK 237
+ +D+++
Sbjct: 251 TLKILDLLE 259
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 23 SQFHLVCKI--DDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFAL 80
S+ HL C I ++ + N ++K + H V+S + D L S S D S+ + L
Sbjct: 312 SRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSF 140
G V+Y+GH V WD + ASGS
Sbjct: 372 ---GSFTNTVLYQGHAYPV------------------------WDLDISPYSLYFASGSH 404
Query: 141 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 200
D++ +++ D+ L +Y GH VD + +H N + L+T S DKTVR+W A+ S
Sbjct: 405 DRTARLWSFDRTYPLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNS 460
Query: 201 QIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
+ T +G +++ ++PNG +A ++ + D+ +E RGH
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL----RGH 509
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 33/193 (17%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V + S ASGS D++ +++ D+
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTY 417
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM---------- 134
L +Y GH VD + +H N + L+T S DKTVR+W A+ S +
Sbjct: 418 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 135 ---------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLST 183
LAS D+ + ++ L G L KE+ RGHT ++ L + +PD L+++
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDL-ASGTLYKEL--RGHTDNITSLTF---SPDSGLIAS 527
Query: 184 ASGDKTVRIWDAR 196
AS D +VR+WD R
Sbjct: 528 ASMDNSVRVWDIR 540
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 37/212 (17%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ HGS V SVA+S DG+R+ASGS DK++ I+ D + + GH GSV + A
Sbjct: 838 EGHGSSVLSVAFSADGQRVASGSDDKTIKIW--DTASGTGTQTL-EGHGGSVWSV---AF 891
Query: 108 NPDLLSTASG--DKTVRIWDA--------------RTQKSQI-----MLASGSFDKSVAI 146
+PD ASG DKT++IWDA R Q +ASGS D ++ I
Sbjct: 892 SPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKI 951
Query: 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWD-ARTQKSQII 203
+ D + + GH SV + A +PD +++ SGDKT++IWD A +Q +
Sbjct: 952 W--DAASGTCTQTL-EGHGSSVLSV---AFSPDGQRVASGSGDKTIKIWDTASGTCTQTL 1005
Query: 204 ATKGENI-NITWAPNGNTIAVGNKEDLVTFID 234
G ++ ++ ++P+G +A G+ + + D
Sbjct: 1006 EGHGGSVWSVAFSPDGQRVASGSDDKTIKIWD 1037
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 46/228 (20%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ + + SGS H + KI D V T + HG V SVA+S DG+R+ASGS D
Sbjct: 1060 SPDGQRVASGSDDHTI-KIWDAVSGTCTQT----LEGHGDSVWSVAFSPDGQRVASGSID 1114
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQK 130
++ I+ D + + GH G V + A +PD ASG D T++IWDA
Sbjct: 1115 GTIKIW--DAASGTCTQTL-EGHGGWVHSV---AFSPDGQRVASGSIDGTIKIWDA---- 1164
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DK 188
ASG+ +++ GH G V + A +PD ASG DK
Sbjct: 1165 -----ASGTCTQTL-----------------EGHGGWVQSV---AFSPDGQRVASGSSDK 1199
Query: 189 TVRIWD-ARTQKSQIIATKGENI-NITWAPNGNTIAVGNKEDLVTFID 234
T++IWD A +Q + G + ++ ++P+G +A G+ ++ + D
Sbjct: 1200 TIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGS 70
SP+ + + SGS ID +K ++ + + + HG V SVA+S DG+R+ASGS
Sbjct: 1144 SPDGQRVASGS-------IDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGS 1196
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDART 128
DK++ I+ D + + GH G V + A +PD ASG D T++IWD +
Sbjct: 1197 SDKTIKIW--DTASGTCTQTL-EGHGGWVQSV---AFSPDGQRVASGSSDNTIKIWDTAS 1250
Query: 129 QKSQIMLASGS 139
L GS
Sbjct: 1251 GTCTQTLNVGS 1261
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 41/250 (16%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-- 131
+VA++ + G+ K + +GHT V+ P L+ T S D TV++WD R + +
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ 189
Query: 132 ------QIM----------LASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWH 174
Q++ + SG D + ++ L + NK RGH SV L
Sbjct: 190 TFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLS 245
Query: 175 ATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENIN--------ITWAPNGNTIAVG 224
+ LLS A D TVR+WD R K + + N++ +W+P+G+ IA G
Sbjct: 246 SEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 304
Query: 225 NKEDLVTFID 234
+ + V D
Sbjct: 305 SADRFVYVWD 314
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELH 117
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
++ T+ +L +AS DKTV +WD+ T G+ K + +G
Sbjct: 118 YN-TDGSMLFSASTDKTVAVWDSET------------------------GERVKRL--KG 150
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTIA 222
HT V+ P L+ T S D TV++WD R + + Q + + +T+ + I
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQII 210
Query: 223 VGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
G ++ + D+ ++ + T T RGH
Sbjct: 211 SGGIDNDIKVWDLRQN----KLTYTMRGH 235
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWHATNPDL 111
+V +V ++ ++ SG D + ++ L + NK RGH SV L + L
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 112 LSTASGDKTVRIWDART------------------QKSQIM---------LASGSFDKSV 144
LS A D TVR+WD R +K+ + +A+GS D+ V
Sbjct: 252 LSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 145 AIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
++ ++ V+Y+ GH GS++++ +H P +LS AS DK + +
Sbjct: 311 YVW-----DTTSRRVLYKLPGHAGSINEVAFHPDEPIILS-ASSDKRLYM 354
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 41/250 (16%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 73 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 131
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-- 131
+VA++ + G+ K + +GHT V+ P L+ T S D TV++WD R + +
Sbjct: 132 TVAVWD-SETGERVKRL--KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 188
Query: 132 ------QIM----------LASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWH 174
Q++ + SG D + ++ L + NK RGH SV L
Sbjct: 189 TFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLS 244
Query: 175 ATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENIN--------ITWAPNGNTIAVG 224
+ LLS A D TVR+WD R K + + N++ +W+P+G+ IA G
Sbjct: 245 SEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 303
Query: 225 NKEDLVTFID 234
+ + V D
Sbjct: 304 SADRFVYVWD 313
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELH 116
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
++ T+ +L +AS DKTV +WD+ T G+ K + +G
Sbjct: 117 YN-TDGSMLFSASTDKTVAVWDSET------------------------GERVKRL--KG 149
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTIA 222
HT V+ P L+ T S D TV++WD R + + Q + + +T+ + I
Sbjct: 150 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 209
Query: 223 VGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
G ++ + D+ ++ + T T RGH
Sbjct: 210 SGGIDNDIKVWDLRQN----KLTYTMRGH 234
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWHATNPDL 111
+V +V ++ ++ SG D + ++ L + NK RGH SV L + L
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLSSEGSYL 250
Query: 112 LSTASGDKTVRIWDART------------------QKSQIM---------LASGSFDKSV 144
LS A D TVR+WD R +K+ + +A+GS D+ V
Sbjct: 251 LSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 145 AIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
++ ++ ++Y+ GH GS++++ +H P ++S AS DK + +
Sbjct: 310 YVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIIIS-ASSDKRLYM 353
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 29/201 (14%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
H +++ S++++ G RL +GSFD +V+++ + ++ + +RG S Q W +
Sbjct: 217 GHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSA-QFNWDCS- 274
Query: 109 PDLLSTASGDKTVRIWDARTQK-------------------SQIMLASGSFDKSVAIFAL 149
L++TAS DK+ ++WD+ K + ++A+ S D + +++
Sbjct: 275 --LIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSA 332
Query: 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGE 208
+ L K GH G + ++C++A ++ TAS DKT R+WD T + Q++ +
Sbjct: 333 SSRKCLAK---LEGHEGEISKICFNAQGNRIV-TASSDKTSRLWDPHTGECLQVLKGHTD 388
Query: 209 NI-NITWAPNGNTIAVGNKED 228
I + + GNTI G+K++
Sbjct: 389 EIFSCAFNYEGNTIITGSKDN 409
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 40/218 (18%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
K +AH + +VA++ G +GS+D++ ++ +L+ GH V +
Sbjct: 85 FKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELH---TLEGHRNVVYAIQ 141
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
++ D ++T S DKT ++W A T K +RG
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAETGKCY--------------------------HTFRG 175
Query: 164 HTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGN 219
HT + L + NP L++T S D T ++WD ++ + + + E I++++ G+
Sbjct: 176 HTAEIVCLVF---NPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGD 232
Query: 220 TIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
+ G+ + V+ V +P R T GH E S
Sbjct: 233 RLITGSFDHTVS----VWEIPSGRRIHTLIGHRGEISS 266
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 43/251 (17%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTVRIWDARTQKS- 131
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R + +
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 132 -------QIM----------LASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCW 173
Q++ + SG D + ++ L + NK RGH SV L
Sbjct: 189 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSL 244
Query: 174 HATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENIN--------ITWAPNGNTIAV 223
+ LLS A D TVR+WD R K + + N++ +W+P+G+ IA
Sbjct: 245 SSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAA 303
Query: 224 GNKEDLVTFID 234
G+ + V D
Sbjct: 304 GSADRFVYVWD 314
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 36/210 (17%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELH 117
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
++ T+ +L +AS DKTV +WD+ T G+ K + +G
Sbjct: 118 YN-TDGSMLFSASTDKTVAVWDSET------------------------GERVKRL--KG 150
Query: 164 HTGSVDQLCWHA-TNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTI 221
HT V+ C+ A P L+ T S D TV++WD R + + Q + + +T+ + I
Sbjct: 151 HTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQI 209
Query: 222 AVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
G ++ + D+ ++ + T T RGH
Sbjct: 210 ISGGIDNDIKVWDLRQN----KLTYTMRGH 235
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWHATNPDL 111
+V +V ++ ++ SG D + ++ L + NK RGH SV L + L
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 112 LSTASGDKTVRIWDART------------------QKSQIM---------LASGSFDKSV 144
LS A D TVR+WD R +K+ + +A+GS D+ V
Sbjct: 252 LSNAM-DNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 145 AIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
++ ++ ++Y+ GH GS++++ +H P +LS AS DK + +
Sbjct: 311 YVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIILS-ASSDKRLYM 354
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 29/201 (14%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
H +++ S++++ G RL +GSFD +V+++ + ++ + +RG S Q W +
Sbjct: 217 GHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSA-QFNWDCS- 274
Query: 109 PDLLSTASGDKTVRIWDARTQK-------------------SQIMLASGSFDKSVAIFAL 149
L++TAS DK+ ++WD+ K + ++A+ S D + +++
Sbjct: 275 --LIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSA 332
Query: 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGE 208
+ L K GH G + ++C++A +L TAS DKT R+W+ T + Q++ +
Sbjct: 333 SSRKCLAK---LEGHEGEISKICFNAQGNRIL-TASSDKTSRLWNPHTGECLQVLKGHTD 388
Query: 209 NI-NITWAPNGNTIAVGNKED 228
I + + GNTI G+K++
Sbjct: 389 EIFSCAFNYEGNTIITGSKDN 409
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 40/218 (18%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
K +AH + +VA++ G +GS+D++ ++ +L+ GH V +
Sbjct: 85 FKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELH---TLEGHRNVVYAIQ 141
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
++ D ++T S DKT ++W A T K +RG
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAETGKCY--------------------------HTFRG 175
Query: 164 HTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGN 219
HT + L A NP L++T S D T ++WD ++ + + + E I++++ G+
Sbjct: 176 HTAEIVCL---AFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGD 232
Query: 220 TIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
+ G+ + V+ V +P R T GH E S
Sbjct: 233 RLITGSFDHTVS----VWEIPSGRRIHTLIGHRGEISS 266
>sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7
PE=1 SV=2
Length = 317
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 42 NDIKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 100
N I+ +Q H +V SV ++ R + S+D +V ++A+D+ + ++ H V
Sbjct: 97 NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVR---TFKEHAYCVY 153
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV 160
Q W+ + D+ ++ASGD T+RIWD R S +++ + F+ I + D
Sbjct: 154 QAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFE----ILSCD---------- 199
Query: 161 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINI 212
W+ + +L+T+S DKTV++WD R+ + + G +
Sbjct: 200 ------------WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAV 239
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWD----------------ARTQKS-------QIM 134
+V +CW ++ +L A GD +V+I+D AR +S +
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDS 121
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+ S+D +V ++A+D+ + ++ H V Q W+ + D+ ++ASGD T+RIWD
Sbjct: 122 FLTSSWDDTVKLWAMDRPASVR---TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Query: 195 ARTQKSQII 203
R S +I
Sbjct: 179 VREPGSTMI 187
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 37 HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 96
H + + H V V +S G LASGS DK+V I+ + KG+ V+R HT
Sbjct: 47 HMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHT 103
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML---------ASGSFDKSVAIF 147
+V + + ++ L TAS DKTV++W Q+ L A S D + +
Sbjct: 104 ATVRSVHF-CSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVS 162
Query: 148 ALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK- 199
A D K ++E + Y H G V + +H + ++ A D TV++WDART +
Sbjct: 163 ASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDARTHRL 221
Query: 200 SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N +++ P+GN + + + + +D+++
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 26 HLVCKIDDYVKHF-----NTHNDIKEYQAHGSKVHSVAWSCDGRRLA-SGSFDKSVAIFA 79
H I DY+KH NT N + + H + + ++W+ + L S S D++V +
Sbjct: 142 HADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
Query: 80 LDKK----GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK----- 130
++ G+L + V++GH V+ + WH + + + DK + IWD RT
Sbjct: 202 INANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCI 261
Query: 131 ---------------SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 175
S+ +LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 262 DAHSAEVNCLAFNPYSEFILATGSADKTVALW--DLRNLRMKLHSFESHRDEIFQVQWSP 319
Query: 176 TNPDLLSTASGDKTVRIWD 194
N +L+++ DK + +WD
Sbjct: 320 HNETILASSGTDKRLHVWD 338
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 25/138 (18%)
Query: 66 LASGSFDKSVAIF------ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 119
+A+ S V IF A+ + N + +GHT L W+ L+ +AS D+
Sbjct: 136 IATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQ 195
Query: 120 TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD 179
TV WD +++VA G+L + V++GH V+ + WH +
Sbjct: 196 TVCHWDINA------------NQNVA-------GELQAKDVFKGHESVVEDVAWHVLHDG 236
Query: 180 LLSTASGDKTVRIWDART 197
+ + DK + IWD RT
Sbjct: 237 VFGSVGDDKKLLIWDVRT 254
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKG-DLNKE----------VV 91
+ +++H ++ V WS LAS DK + ++ L K G D + E +
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFI 361
Query: 92 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ GHT + W+ P ++ + S D +++W
Sbjct: 362 HGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 38/239 (15%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY--QAHGSKVHSVAWSCDGRRLASGS 70
+P+ L+ +GS +D K ++ N + Y + H +++ S++++ G R+ +GS
Sbjct: 186 NPQSTLVATGS-------MDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGS 238
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGH-----------------TGSVDQLC--WHATNPDL 111
FD +V ++ D +N + GH TGS+D+ C W ATN
Sbjct: 239 FDHTVVVWDADTGRKVN---ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKC 295
Query: 112 LSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
++T +G I D+ + ++A+ S D + IF+ + + K GH G + ++
Sbjct: 296 VATLTGHDD-EILDSCFDYTGKLIATASADGTARIFSAATRKCIAK---LEGHEGEISKI 351
Query: 172 CWHATNPDLLSTASGDKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKED 228
++ LL T S DKT RIWDA+T Q Q++ + I + + GN + G+K++
Sbjct: 352 SFNPQGNHLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
K +AH + +VA + G +GS+D++ ++ +LN GH V +
Sbjct: 85 FKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELN---TLEGHRNVVYAIA 141
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQK-------------------SQIMLASGSFDKSV 144
++ D ++T S DKT ++W T K ++A+GS D +
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 145 AIFALDKKGDLNKEVVY--RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 199
++ + N E VY RGH+ + L ++ T+ D + T S D TV +WDA T +
Sbjct: 202 KLWDIQ-----NGEEVYTLRGHSAEIISLSFN-TSGDRIITGSFDHTVVVWDADTGR 252
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
KS +GS+D++ ++ +LN GH V + ++ D ++T S DKT
Sbjct: 102 KSGSCFITGSYDRTCKLWDTASGEELN---TLEGHRNVVYAIAFNNPYGDKIATGSFDKT 158
Query: 190 VRIWDARTQKS--QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLT 247
++W T K E + +++ P +A G+ + D+ E T
Sbjct: 159 CKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG----EEVYT 214
Query: 248 SRGHLMETRSL 258
RGH E SL
Sbjct: 215 LRGHSAEIISL 225
>sp|Q6CMA2|CIAO1_KLULA Probable cytosolic iron-sulfur protein assembly protein 1
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CIA1 PE=3
SV=1
Length = 333
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 52/240 (21%)
Query: 43 DIKEYQ--------AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG-----DLNKE 89
DI+ +Q AH V SVAW LA+GSFD +V+I+ D G DL E
Sbjct: 41 DIRSFQIIEELDDTAHKKTVRSVAWRPHSNILAAGSFDSTVSIWGKDDDGYNDENDLETE 100
Query: 90 V--VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------------- 133
+ + GH + + W + + +LL+T S DK+V IW+A +
Sbjct: 101 LLAIIEGHENEIKCVAW-SHDGELLATCSRDKSVWIWEADEMGEEFECISVLQEHSQDVK 159
Query: 134 ---------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LST 183
+LAS S+D +V I+ D D V GH G+V + +N ++ L +
Sbjct: 160 HVIWHQSLPLLASSSYDDTVRIWK-DCDDDWECCAVLNGHEGTVWSSDFEKSNSNVRLCS 218
Query: 184 ASGDKTVRIW-----DARTQKSQI---IATKGEN---INITWAPNGNTIAVGNKEDLVTF 232
S D TVRIW + ++ I I K ++ W+P G + G+ LV +
Sbjct: 219 GSDDGTVRIWCLEDDNGEYEQEWIQESILPKAHTRAVYSVNWSPKGYIASTGSDGRLVIY 278
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 36/171 (21%)
Query: 38 FNTHNDIKE-----YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV-V 91
+N ND++ + H +++ VAWS DG LA+ S DKSV I+ D+ G+ + + V
Sbjct: 91 YNDENDLETELLAIIEGHENEIKCVAWSHDGELLATCSRDKSVWIWEADEMGEEFECISV 150
Query: 92 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW-----------------------DART 128
+ H+ V + WH + P LL+++S D TVRIW D
Sbjct: 151 LQEHSQDVKHVIWHQSLP-LLASSSYDDTVRIWKDCDDDWECCAVLNGHEGTVWSSDFEK 209
Query: 129 QKSQIMLASGSFDKSVAIFAL-DKKGDLNKE-----VVYRGHTGSVDQLCW 173
S + L SGS D +V I+ L D G+ +E ++ + HT +V + W
Sbjct: 210 SNSNVRLCSGSDDGTVRIWCLEDDNGEYEQEWIQESILPKAHTRAVYSVNW 260
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 41/250 (16%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + + V + ++ DG L S S DK
Sbjct: 73 KFHPNGSTL-ASAGFDRLILLWNVYGDCGNYATLKGYSGAVMELHYNTDGSMLFSASTDK 131
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-- 131
+VA++ + G+ K + +GHT V+ P L+ T S D TV++WD R + +
Sbjct: 132 TVAVWD-SETGERVKRL--KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 188
Query: 132 ------QIM----------LASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWH 174
Q++ + SG D + ++ L + NK RGH SV L
Sbjct: 189 TFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLS 244
Query: 175 ATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENIN--------ITWAPNGNTIAVG 224
+ LLS A D TVR+WD R K + + N++ +W+P+G+ IA G
Sbjct: 245 SEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 303
Query: 225 NKEDLVTFID 234
+ + V D
Sbjct: 304 SADRSVCVWD 313
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I H +V+ + +G LAS FD+ + ++ + GD +G++G+V +L
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCGNYATLKGYSGAVMELH 116
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
++ T+ +L +AS DKTV +WD+ T G+ K + +G
Sbjct: 117 YN-TDGSMLFSASTDKTVAVWDSET------------------------GERVKRL--KG 149
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTIA 222
HT V+ P L+ T S D TV++WD R + + Q + + +T+ + I
Sbjct: 150 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 209
Query: 223 VGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
G ++ + D+ ++ + T T RGH
Sbjct: 210 SGGIDNDIKVWDLRQN----KLTYTMRGH 234
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 41/170 (24%)
Query: 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWHATNPDL 111
+V +V ++ ++ SG D + ++ L + NK RGH SV L + L
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ----NKLTYTMRGHADSVTGLSLSSEGSYL 250
Query: 112 LSTASGDKTVRIWDART------------------QKSQIM---------LASGSFDKSV 144
LS A D TVR+WD R +K+ + +A+GS D+SV
Sbjct: 251 LSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSV 309
Query: 145 AIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
++ ++ ++Y+ GH GS++++ +H P ++S AS DK + +
Sbjct: 310 CVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIIIS-ASSDKRLYM 353
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 45 VWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRA 101
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML---------ASGSFDKSVA 145
HT +V + + ++ TAS DKTV++W QK L A S D +
Sbjct: 102 HTATVRSVHF-CSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 146 IFALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198
+ A D K ++E V Y H G V + +H + ++ A D TV++WD RT
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDVRTH 219
Query: 199 K-SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+ Q +N +++ P+GN + + + + +D+++
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLME 260
>sp|O88879|APAF_MOUSE Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1
PE=1 SV=3
Length = 1249
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 44/219 (20%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H V+ +S DG+R+AS DK++ +F K K + + H V C +++
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVF---KAETGEKLLDIKAHEDEV-LCCAFSSDD 669
Query: 110 DLLSTASGDKTVRIWDARTQK---------------------SQIMLASGSFDKSVAIFA 148
++T S DK V+IWD+ T K + ++LA+GS D + ++
Sbjct: 670 SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729
Query: 149 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KS 200
L++K N GHT SV+ C + + +LL++ S D T+R+WD R+ K
Sbjct: 730 LNQKECRNTMF---GHTNSVNH-CRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785
Query: 201 QIIATKG--ENINI-----TWAPNGNTIAVGNKEDLVTF 232
++++ E++ + +W+ +G+ I V K ++ F
Sbjct: 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824
>sp|Q5XGE2|UTP15_XENTR U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus
tropicalis GN=utp15 PE=2 SV=1
Length = 515
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 37/248 (14%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDGRRLASGSFDKS 74
KLL +G + D V+ F+ ++++ H VH V ++ D R+ SGS D +
Sbjct: 93 KLLAAGCE-------DSVVQLFDISGKAALRQFSGHSKAVHFVDFTADKYRIVSGSDDYT 145
Query: 75 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
++ + ++ Y HT + C A N DL +T S D T++I+D RT KS +
Sbjct: 146 SRLWDIPNGVEITS---YNEHTDYIRCGCTSALNNDLFATGSYDHTIKIFDGRTDKSVMS 202
Query: 135 LASGSFDKSVAIFA-----------------LDKKGDLNKEVVYRGHTGSVDQLCWHATN 177
+ G +SV +F + K G L V R H +V LC ++
Sbjct: 203 MDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQL--LVSLRNHHKTVTSLCLSSSG 260
Query: 178 PDLLSTASGDKTVRIWDARTQK-SQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236
LLS AS D+ V+++ K +++ AP+ I VG ++ +
Sbjct: 261 QRLLS-ASLDRHVKVYSTMNYKVVHSFDYAASILSLALAPDDQMIVVGMTNGVLN----I 315
Query: 237 KSLPPRER 244
K P ER
Sbjct: 316 KHRKPEER 323
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 31/184 (16%)
Query: 40 THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSV 99
+ IK + + + DG+ LA+G D V +F + K L + + GH+ +V
Sbjct: 69 SQEPIKTFSRFKDTAYCGTFRGDGKLLAAGCEDSVVQLFDISGKAALRQ---FSGHSKAV 125
Query: 100 DQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV 159
+ + A ++S S D T R+WD V I +
Sbjct: 126 HFVDFTADKYRIVS-GSDDYTSRLWD--------------IPNGVEITS----------- 159
Query: 160 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENI-NITWAPNG 218
Y HT + C A N DL +T S D T++I+D RT KS + G+ + ++ P+G
Sbjct: 160 -YNEHTDYIRCGCTSALNNDLFATGSYDHTIKIFDGRTDKSVMSMDHGQPVESVLLFPSG 218
Query: 219 NTIA 222
+
Sbjct: 219 GLLV 222
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 100
H Y H V S+ +S G LAS S DK+V ++ LD+KG K ++ HT V
Sbjct: 50 HARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKG---KSSEFKAHTAPVR 106
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------------------MLASGSFD 141
+ + A + L TAS DK++++W Q+ ++ S S D
Sbjct: 107 SVDFSA-DGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSED 165
Query: 142 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-S 200
K++ I+ K +N G VD + N +++A D VRIWD R +
Sbjct: 166 KTIKIWDTTSKQCVNNFSDSVGFANFVD----FSPNGTCIASAGSDHAVRIWDIRMNRLL 221
Query: 201 QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N +++ P+GN++ + + V +D+V+
Sbjct: 222 QHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVE 259
>sp|Q75C26|CIAO1_ASHGO Probable cytosolic iron-sulfur protein assembly protein 1 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=CIA1 PE=3 SV=1
Length = 328
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 52/261 (19%)
Query: 18 LLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAI 77
LL +GS + +D V++F ++ + AH V SVAW LA+GSFD +V+I
Sbjct: 26 LLATGSADRKIKLVD--VRNFKLVEELDD-TAHKKAVRSVAWRPHCNVLAAGSFDTTVSI 82
Query: 78 FALDK---KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART------ 128
+ D G+ V GH V + W + + L+T S DK+V IW+A
Sbjct: 83 WGRDDDDYSGETELLAVIEGHENEVKSVAW-SHDGAYLATCSRDKSVWIWEADELSEEFE 141
Query: 129 -----------------QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
S+++LAS S+D +V I+A ++ D V GH G+V
Sbjct: 142 CNSVLQEHSQDVKHIVWHASRLLLASSSYDDTVRIWA-EQDDDWECAAVLSGHGGTV--- 197
Query: 172 CW-----HATNPDLLSTASGDKTVRIWDARTQKSQIIATK--GENI----------NITW 214
W A L + S D TVRIW T + + + E + +++W
Sbjct: 198 -WCSDFERAETGIRLCSGSDDTTVRIWRCLTDDADVFDKEWIQETVLPAVHTRAVYSVSW 256
Query: 215 APNGNTIAVGNKEDLVTFIDV 235
+ +G +VG+ L + +V
Sbjct: 257 SADGLIASVGSDGVLAVYKEV 277
>sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana
GN=MSI2 PE=2 SV=1
Length = 415
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 49 AHGSKVHSVAWS-CDGRRLASGSFDKSVAIF---ALDKKGDLNKEVVYRGHTGSVDQLCW 104
H + + ++WS L SGS D+ + ++ A + LN VY GH ++ + W
Sbjct: 166 GHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSW 225
Query: 105 HATNPDLLSTASGDKTVRIWDARTQKSQ--------------------IMLASGSFDKSV 144
H N +L +A D + IWD RT + Q +LA+ S D +V
Sbjct: 226 HMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTV 285
Query: 145 AIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
A+F L K LN + V H G V Q+ W + +L+++ D+ + +WD
Sbjct: 286 ALFDLRK---LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 135 LASGSFDKSVAIF---ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
L SGS D+ + ++ A + LN VY GH ++ + WH N +L +A D +
Sbjct: 184 LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLV 243
Query: 192 IWDARTQKS--QIIATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTS 248
IWD RT + Q+ + E +++ P N +A + + V D+ K P +
Sbjct: 244 IWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSH 303
Query: 249 RGHLMETR 256
G + +
Sbjct: 304 EGEVFQVE 311
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 66 LASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
LA+ S D +VA+F L K LN + V H G V Q+ W + +L+++ D+ + +W
Sbjct: 276 LATASSDSTVALFDLRK---LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
Query: 125 DA-RTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183
D R + Q+ + + D + + GH + W+ P ++++
Sbjct: 333 DLNRVGEEQLEIELDAEDGPPELL-----------FSHGGHKAKISDFAWNKNEPWVIAS 381
Query: 184 ASGDKTVRIW 193
+ D ++++W
Sbjct: 382 VAEDNSLQVW 391
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEV-------------VYRG 94
+H +V V W + LAS D+ + ++ L++ G+ E+ + G
Sbjct: 302 SHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGG 361
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
H + W+ P ++++ + D ++++W
Sbjct: 362 HKAKISDFAWNKNEPWVIASVAEDNSLQVW 391
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 45 VWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRA 101
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------------------ML 135
HT +V + + ++ TAS DKTV++W QK ++
Sbjct: 102 HTATVRSVHF-CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 136 ASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
S S DK+V ++ DK ++E V Y H G V + +H + ++ A D TV++W
Sbjct: 161 VSASDDKTVKLW--DKS---SRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVW 214
Query: 194 DARTQK-SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
D RT + Q +N +++ P+GN + + + + +D+++
Sbjct: 215 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 260
>sp|Q05583|CIAO1_YEAST Cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CIA1 PE=1
SV=1
Length = 330
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 110/261 (42%), Gaps = 50/261 (19%)
Query: 18 LLPSGS---QFHLV-CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDK 73
+L +GS + LV K DD+ T D+ + AH + SVAW LA+GSFD
Sbjct: 26 ILATGSTDRKIKLVSVKYDDF-----TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80
Query: 74 SVAIFALDKKGDLNKEV----VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART- 128
+V+I+A ++ D E+ + GH V + W + + L+T S DK+V IW+
Sbjct: 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW-SNDGYYLATCSRDKSVWIWETDES 139
Query: 129 ----------------------QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 166
S+ +LAS S+D +V I+ D D V GH G
Sbjct: 140 GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWK-DYDDDWECVAVLNGHEG 198
Query: 167 SVDQLCWHATNPDL-LSTASGDKTVRIW-----DARTQKSQIIAT------KGENINITW 214
+V + T L + S D TVR+W D Q+ + K + N+ W
Sbjct: 199 TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW 258
Query: 215 APNGNTIAVGNKEDLVTFIDV 235
NG +VG L + +V
Sbjct: 259 GFNGLIASVGADGVLAVYEEV 279
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 35 VKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93
VK+F + N++K QAH +V VA+S + + + S D S+ ++ +E+
Sbjct: 147 VKYFEPNLNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMS---TEELKLT 203
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART---------QKSQIM---------- 134
GH V + WH + LL++ S D V+ WD RT K+ IM
Sbjct: 204 GHGWDVKTVDWHPSK-GLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGS 262
Query: 135 --LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
LA+ S D + +F L D+ V RGH V+ + WH P+LL+T D +V
Sbjct: 263 NYLATVSRDSTCRVFDLRAMKDVR---VLRGHEKDVNCVTWHPLYPNLLTTGGSDGSV 317
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 30/181 (16%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
++ V W+ DGRRL +GS S F L N E++ + H +V W +T+ L
Sbjct: 84 INVVRWTPDGRRLLTGS---STGEFTLWNGLTFNFELINQSHDYAVRCAEW-STDGRWLI 139
Query: 114 TASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 173
+ G V+ ++ +I+ A + VA D K V GS+ +
Sbjct: 140 SGDGGGMVKYFEPNLNNVKIVQAHEMEVRDVAFSPNDSK------FVTASDDGSLKVWNF 193
Query: 174 HATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFI 233
H + +L T G WD +T + W P+ +A G+K++LV F
Sbjct: 194 HMSTEELKLTGHG------WDVKT--------------VDWHPSKGLLASGSKDNLVKFW 233
Query: 234 D 234
D
Sbjct: 234 D 234
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 48/237 (20%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQ--AHGSKVHSVA 58
N ++Q H + + P+ S+F + D +K +N H +E + HG V +V
Sbjct: 155 NNVKIVQAHEMEVRDVAFSPNDSKF-VTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVD 213
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASG 117
W LASGS D V + D + ++ GH ++ Q + + L+T S
Sbjct: 214 WHPSKGLLASGSKDNLVKFW--DPRTGTCIATLH-GHKNTIMQASFQKNFGSNYLATVSR 270
Query: 118 DKTVRIWDARTQKS--------------------QIMLASGSFDKSVAIFALDKKGDLNK 157
D T R++D R K +L +G D SV ++LD+ L++
Sbjct: 271 DSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSLDEPPLLSQ 330
Query: 158 EVVYRGH---TGSVDQLCWHAT----------------NP--DLLSTASGDKTVRIW 193
+ + H T S + T +P LL T S DKT R W
Sbjct: 331 QKYHEKHPNVTLSASSYLLYPTAEIPFAHDLGIWSMQYHPLGHLLCTGSNDKTTRFW 387
>sp|Q54WA3|PEX7_DICDI Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum
GN=pex7 PE=3 SV=1
Length = 316
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 26/182 (14%)
Query: 44 IKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
IK ++ H +V+SV W+ + +GS+D+S+ I+ L +R H +
Sbjct: 97 IKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLK---TFREHRYCIYSA 153
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKS---------QIM-----------LASGSFDK 142
W N L ++ SGD+T++IWD+R +S +I+ + +GS DK
Sbjct: 154 IWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDK 213
Query: 143 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI 202
++ I+ D + + RGHT +V ++ + +L++ S D +V +WD ++ I
Sbjct: 214 TIRIW--DIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPI 271
Query: 203 IA 204
IA
Sbjct: 272 IA 273
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQK-----------------------SQIMLASGSF 140
W N ++++SGD +++IWD + ++ +GS+
Sbjct: 66 WSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSW 125
Query: 141 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 200
D+S+ I+ L +R H + W N L ++ SGD+T++IWD+R +S
Sbjct: 126 DQSIKIWNPRMDRSLK---TFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS 182
Query: 201 --QIIATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
I A E + W N + G+ + + D+ P R T+ RGH R
Sbjct: 183 LNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDI--RYPDRPTTIL-RGHTYAVRR 239
Query: 258 L 258
+
Sbjct: 240 I 240
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 33/224 (14%)
Query: 37 HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 96
+F H Y H V SV +S G LAS S D++V ++ DK+G ++ ++ HT
Sbjct: 46 NFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE---FKAHT 102
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------------------MLAS 137
V + + A + L+TAS DK++++W Q+ ++ S
Sbjct: 103 APVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 138 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDA 195
S DK++ I+ K +N G VD NP +++A D+TV++WD
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD------FNPSGTCIASAGSDQTVKVWDV 215
Query: 196 RTQK-SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
R K Q +N I++ P+GN + + + + +D+++
Sbjct: 216 RVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 259
>sp|Q8C7V3|UTP15_MOUSE U3 small nucleolar RNA-associated protein 15 homolog OS=Mus
musculus GN=Utp15 PE=2 SV=1
Length = 528
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA 76
+LL +GS+ +V D N +++++ H VH+V ++ D + SG+ D +V
Sbjct: 93 QLLVAGSEDGVVQLFD-----INGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVK 147
Query: 77 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLA 136
++ + ++ + ++ H+ V C NPDL T S D TV+I+DART K+ + +
Sbjct: 148 LWDIPNSKEI---LTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCVE 204
Query: 137 SGSFDKSVAIFA-----------------LDKKGDLNKEVVYRGHTGSVDQLCWHATNPD 179
G +SV +F + K G L V + H +V LC ++
Sbjct: 205 HGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQL--LVSLKNHHKTVTCLCLSSSGQR 262
Query: 180 LLSTASGDKTVRIWDARTQK 199
LLS S D+ V+++ + K
Sbjct: 263 LLS-GSLDRKVKVYSTTSYK 281
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 39/214 (18%)
Query: 10 TPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASG 69
+P+ P + + S+ H+ + + +K + + + DG+ L +G
Sbjct: 47 SPQLPYNYAVTASSRIHIYGRY--------SQEPVKTFSRFKDTAYCATFRQDGQLLVAG 98
Query: 70 SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129
S D V +F ++ + L + + GHT +V + + A N ++S A D TV++WD
Sbjct: 99 SEDGVVQLFDINGRAPLRQ---FEGHTKAVHTVDFTADNYHVVSGAD-DYTVKLWDIPNS 154
Query: 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
K + ++ H+ V C NPDL T S D T
Sbjct: 155 KEIL--------------------------TFKEHSDYVRCGCASKLNPDLFVTGSYDHT 188
Query: 190 VRIWDARTQKSQIIATKGENI-NITWAPNGNTIA 222
V+I+DART K+ + G+ + ++ P+G +
Sbjct: 189 VKIFDARTNKNVLCVEHGQPVESVLLFPSGGLLV 222
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 34/210 (16%)
Query: 40 THNDIKEY--QAHGSKVHSVAWSCDGRRLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHT 96
T N I +Y + H + SV +S DG+ LAS S DK++ I+ A D K + E GH
Sbjct: 33 TPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE----GHK 88
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------------SQIMLAS 137
+ + W + + L+ +AS DKT++IWD + K ++ S
Sbjct: 89 EGISDIAW-SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVS 147
Query: 138 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 197
GSFD++V I+ ++ G+ K + H+ V + ++ + L+ + S D TVRIWD T
Sbjct: 148 GSFDENVRIWDVN-TGECTKMI--SAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWDTTT 203
Query: 198 -QKSQIIATK-GENIN-ITWAPNGNTIAVG 224
Q I+T+ G+ ++ + ++PNG + G
Sbjct: 204 GQLLNTISTEDGKEVSFVKFSPNGKFVLAG 233
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 86/222 (38%), Gaps = 33/222 (14%)
Query: 8 FHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLA 67
F +P+ L+ SGS F +I D NT K AH V V ++ DG +
Sbjct: 134 FGVSFNPQSNLIVSGS-FDENVRIWD----VNTGECTKMISAHSDPVTGVHFNRDGTLVV 188
Query: 68 SGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
SGS+D +V I+ LN G S + + N + + D T+R+W
Sbjct: 189 SGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKF---SPNGKFVLAGTLDNTLRLWSYN 245
Query: 128 TQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 187
K + +G ++ IF+ T SV W + T S D
Sbjct: 246 NNKKCLKTYTGHKNEKYCIFS----------------TFSVTCGKW-------IVTGSED 282
Query: 188 KTVRIWDARTQKSQIIATKGENINITWA--PNGNTIAVGNKE 227
+ I++ +T++ E++ +T A P N IA G E
Sbjct: 283 NLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALE 324
>sp|A6ZYM0|CIAO1_YEAS7 Probable cytosolic iron-sulfur protein assembly protein 1
OS=Saccharomyces cerevisiae (strain YJM789) GN=CIA1 PE=3
SV=1
Length = 330
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 41/232 (17%)
Query: 43 DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV----VYRGHTGS 98
D+ + AH + SVAW LA+GSFD +V+I+A ++ D E+ + GH
Sbjct: 50 DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENE 109
Query: 99 VDQLCWHATNPDLLSTASGDKTVRIWDART-----------------------QKSQIML 135
V + W + + L+T S DK+V IW+ S+ +L
Sbjct: 110 VKGVAW-SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168
Query: 136 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRIW- 193
AS S+D +V I+ D D V GH G+V + T L + S D TVR+W
Sbjct: 169 ASSSYDDTVRIWK-DYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227
Query: 194 ----DARTQKSQIIAT------KGENINITWAPNGNTIAVGNKEDLVTFIDV 235
D Q+ + K + N+ W NG +VG L + +V
Sbjct: 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEV 279
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 31/211 (14%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
AH + + +S DGR + SGS D S+ I+ + D E GH +++ W +++
Sbjct: 105 AHKKSISGIKFSPDGRYMGSGSADCSIKIWRM----DFVYEKTLMGHRLGINEFSW-SSD 159
Query: 109 PDLLSTASGDKTVRIWDARTQK-------------------SQIMLASGSFDKSVAIFAL 149
L+ + S DK V+++D + + S ++ASGSFD+++ I+
Sbjct: 160 SKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCA 219
Query: 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN 209
N GH V +C++ L++ S D VRIWD+ T E+
Sbjct: 220 RNG---NTIFSIPGHEDPVSSVCFNRDG-AYLASGSYDGIVRIWDSTTGTCVKTLIDEEH 275
Query: 210 INIT---WAPNGNTIAVGNKEDLVTFIDVVK 237
IT ++PNG I N + + D K
Sbjct: 276 PPITHVKFSPNGKYILASNLNNTLKLWDYQK 306
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 21 SGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIF 78
S S+ + C D VK F+ + +K + H + V ++ G +ASGSFD+++ I+
Sbjct: 158 SDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIW 217
Query: 79 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
N GH V +C++ L++ S D VRIWD+ T
Sbjct: 218 CARNG---NTIFSIPGHEDPVSSVCFNRDG-AYLASGSYDGIVRIWDSTT 263
>sp|P49178|GBB_MAIZE Guanine nucleotide-binding protein subunit beta OS=Zea mays GN=GB1
PE=2 SV=1
Length = 380
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 33/206 (16%)
Query: 42 NDIKEYQAHGSKVH-----SVAWSCDGRRLASGSFDKSVAIFAL----DKKGDLNKEVVY 92
N + + H K+H + A++ +G+ +A G D + +IF L D+ G++ +
Sbjct: 94 NALTSQKTHAIKLHCPWVMACAFAPNGQSVACGGLDSACSIFNLNSQADRDGNMPVSRIL 153
Query: 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKK 152
GH G V + L T+SGD+T +WD T + +I + G F
Sbjct: 154 TGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTGQ-RISIFGGEFPS---------- 202
Query: 153 GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG--ENI 210
GHT V + +++N ++ + S D TVR+WD R + G +++
Sbjct: 203 ----------GHTADVQSVSINSSNTNMFVSGSCDTTVRLWDIRIASRAVRTYHGHEDDV 252
Query: 211 N-ITWAPNGNTIAVGNKEDLVTFIDV 235
N + + P+G+ G+ + D+
Sbjct: 253 NSVKFFPDGHRFGTGSDDGTCRLFDM 278
>sp|Q2TZG4|PFS2_ASPOR Polyadenylation factor subunit 2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pfs2 PE=3 SV=1
Length = 610
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 96/251 (38%), Gaps = 58/251 (23%)
Query: 31 IDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV 90
I + +FN I + AH V +AWS + S S D ++ IF + +
Sbjct: 168 IKYWRPNFNNVETIDD--AHHDAVRDLAWSPSDTKFLSASDDTTLKIFDFTSR---TADT 222
Query: 91 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------------- 130
V GH V WH T LL + S D V+ WD RT +
Sbjct: 223 VLTGHNWDVKSCDWHPTK-GLLVSGSKDHQVKFWDPRTARCLTTLHSHKNTVTATRFSRV 281
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
+Q +LA+ S D++ +F L D+ + RGH V L WH + L+ST S D ++
Sbjct: 282 NQNLLATSSRDQTARVFDLRMMRDI---CILRGHEKPVSSLTWHPIHSSLISTGSEDGSL 338
Query: 191 RIW---------------------DARTQKSQII--------ATKGENINITWAPNGNTI 221
+ D +Q+I A ++ W P G+ +
Sbjct: 339 YHYLLDEPNVPSGQIPTIAPYDSPDPANTPAQVIYPAHRVQYAHSATIWSLDWHPLGHIL 398
Query: 222 AVGNKEDLVTF 232
A G+K++ F
Sbjct: 399 ASGSKDNFTRF 409
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 27/190 (14%)
Query: 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWS-CDGRRLASGSFD 72
P LL SGS+ H V D T + +H + V + +S + LA+ S D
Sbjct: 238 PTKGLLVSGSKDHQVKFWDP-----RTARCLTTLHSHKNTVTATRFSRVNQNLLATSSRD 292
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW---DARTQ 129
++ +F L D+ + RGH V L WH + L+ST S D ++ + +
Sbjct: 293 QTARVFDLRMMRDI---CILRGHEKPVSSLTWHPIHSSLISTGSEDGSLYHYLLDEPNVP 349
Query: 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR------GHTGSVDQLCWHATNPDLLST 183
QI ++A + + +V+Y H+ ++ L WH +L++
Sbjct: 350 SGQI--------PTIAPYDSPDPANTPAQVIYPAHRVQYAHSATIWSLDWHPLG-HILAS 400
Query: 184 ASGDKTVRIW 193
S D R W
Sbjct: 401 GSKDNFTRFW 410
>sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=4
Length = 485
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 18 LLPSGSQFHLVCKIDDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSV 75
LL S SQ D +K + H+ + + Q HG V+++A S D L +G+F+ +
Sbjct: 259 LLYSASQ-------DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAE 310
Query: 76 A-IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI- 133
A + A D +G L KE+ R S P+ L + S D T+ +W K +
Sbjct: 311 ATVNAQDLQGSL-KELKERA---SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLA 366
Query: 134 -------------------MLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCW 173
++AS SFDKS+ ++ G K + RGH +V Q+ W
Sbjct: 367 RMTGHQALINQVLFSPDSRIVASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAW 422
Query: 174 HATNPDLLSTASGDKTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
A + LL + S D T+++WD + QK + + E + W+P+G +A G K+
Sbjct: 423 SA-DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 79/188 (42%), Gaps = 41/188 (21%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQA----HGSKVHSVAWSCDGRRLAS 68
S Y L+ LV DD+ + + K+ A H + ++ V +S D R +AS
Sbjct: 330 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 389
Query: 69 GSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
SFDKS+ ++ G K + RGH +V Q+ W A + LL + S D T+++WD +
Sbjct: 390 ASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVK 444
Query: 128 TQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG- 186
QK L GH V + W +PD ASG
Sbjct: 445 AQKLATDLP--------------------------GHADEVYAVDW---SPDGQRVASGG 475
Query: 187 -DKTVRIW 193
DK +RIW
Sbjct: 476 KDKCLRIW 483
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 73/175 (41%), Gaps = 38/175 (21%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + +GH V + W
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW--- 164
Query: 108 NPDLLSTASGDKT--VRIWDART--QKSQIM-----------------------LASGSF 140
+PD ASG K V +WD T Q + + +AS S
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 224
Query: 141 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 195
D SV ++ E + GHT SV L W LL +AS D+T+++W A
Sbjct: 225 DGSVRVWDTTAG---RCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKVWRA 274
Score = 38.5 bits (88), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 49/199 (24%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM------------------- 134
GH+ +V + + T L++ SGD TVR WD T+
Sbjct: 112 GHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKK 170
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA--TNPD--LLSTASGDKTV 190
LASG + V ++ D L GH+ + L W NP+ ++++S D +V
Sbjct: 171 LASGCKNGQVLLW--DPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 191 RIWDARTQKSQIIATKGENINIT---WAPNG--------NTIAVGNKEDLVTFIDVVKSL 239
R+WD + + I T G ++T W +G TI V D V
Sbjct: 229 RVWDTTAGRCERILT-GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLC------- 280
Query: 240 PPRERTLTSRGHLMETRSL 258
RTL GH + T +L
Sbjct: 281 ----RTLQGHGHWVNTMAL 295
>sp|Q9C0J8|WDR33_HUMAN pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33
PE=1 SV=2
Length = 1336
Score = 63.5 bits (153), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 34 YVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92
YVK++ ++ N++K +QAH + ++S + A+ S D +V I+ + ++E +
Sbjct: 184 YVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERIL 240
Query: 93 RGHTGSVDQLCWHATNPDLLS-TASGDKTVRIWDART---------QKSQIM-------- 134
RGH V + WH T ++S + + ++ WD +T K+ +M
Sbjct: 241 RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG 300
Query: 135 --LASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
L + S D +F + +L +E+ V+RGH + WH + L ++ D ++
Sbjct: 301 NWLLTASRDHLCKLFDIR---NLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLL 357
Query: 192 IWDARTQKS---QIIATKGENINITWAPNGNTIAVGNKEDLVTF 232
W +K +A +G ++ W P G+ + G+ + F
Sbjct: 358 FWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V V W+ +GRRL +G+ S F L N E + + H V + W + N +
Sbjct: 122 VFVVRWTPEGRRLVTGA---SSGEFTLWNGLTFNFETILQAHDSPVRAMTW-SHNDMWML 177
Query: 114 TASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKK-------GDL--------NKE 158
TA V+ W + ++ A + + D K G + ++E
Sbjct: 178 TADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEE 237
Query: 159 VVYRGHTGSVDQLCWHATNPDLLS-TASGDKTVRIWDARTQKS--QIIATKGENINITWA 215
+ RGH V + WH T ++S + + ++ WD +T +S + A K + +
Sbjct: 238 RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLN 297
Query: 216 PNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
NGN + +++ L D +++L +E RGH E ++
Sbjct: 298 LNGNWLLTASRDHLCKLFD-IRNL--KEELQVFRGHKKEATAV 337
>sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae
GN=lin-53 PE=3 SV=2
Length = 416
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 32/194 (16%)
Query: 31 IDDYVKHF-----NTHNDIKEYQAHGSKVHSVAWSCDGRRLA-SGSFDKSVAIFALD--- 81
I DY K+ NT N + + + H + + ++W+ + L S S D++V + ++
Sbjct: 147 IFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNA 206
Query: 82 -KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ----------- 129
G+L +++GH V+ + WH + + + DK + IWD RT
Sbjct: 207 GANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSA 266
Query: 130 ---------KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 180
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +
Sbjct: 267 EVNCLAFNPYSEFILATGSADKTVALW--DLRNLRLKLHSFESHRDEIFQVQWSPHNETI 324
Query: 181 LSTASGDKTVRIWD 194
L+++ DK + +WD
Sbjct: 325 LASSGTDKRLHVWD 338
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 44/184 (23%)
Query: 47 YQAHGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKKGDLNKEV---VYRGHTGSVDQ 101
++ H S V VAW DG + G DK + I+ DL V H+ V+
Sbjct: 218 FKGHESVVEDVAWHVLHDGVFGSVGD-DKKLLIW------DLRTNVPGHAIDAHSAEVNC 270
Query: 102 LCWHATNPDLLSTASGDKTVRIWDARTQK---------------------SQIMLASGSF 140
L ++ + +L+T S DKTV +WD R + ++ +LAS
Sbjct: 271 LAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGT 330
Query: 141 DKSVAIFALDKKG-DLNKE----------VVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
DK + ++ L K G D E ++ GHT + W+ P ++ + S D
Sbjct: 331 DKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNI 390
Query: 190 VRIW 193
+++W
Sbjct: 391 LQVW 394
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 25/138 (18%)
Query: 66 LASGSFDKSVAIF------ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 119
+A+ S V IF ++ K N + +GHT L W+ L+ +AS D+
Sbjct: 136 IATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQ 195
Query: 120 TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD 179
TV WD G+L +++GH V+ + WH +
Sbjct: 196 TVCHWDINGNAG-------------------ANGELKAREIFKGHESVVEDVAWHVLHDG 236
Query: 180 LLSTASGDKTVRIWDART 197
+ + DK + IWD RT
Sbjct: 237 VFGSVGDDKKLLIWDLRT 254
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKG-DLNKE----------VV 91
+ +++H ++ V WS LAS DK + ++ L K G D E +
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFI 361
Query: 92 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ GHT + W+ P ++ + S D +++W
Sbjct: 362 HGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
>sp|Q99KN2|CIAO1_MOUSE Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Mus musculus GN=Ciao1 PE=2 SV=1
Length = 339
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 118/305 (38%), Gaps = 59/305 (19%)
Query: 5 VIQFHTPKSPEYKLL-----PSGSQFHLVCKIDDYVKHFNTHND---IKEY--QAHGSKV 54
V+Q P P+ + PSG+ C D ++ + T D K + H V
Sbjct: 6 VLQSRVPAHPDSRCWFLAWNPSGTLL-ASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTV 64
Query: 55 HSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 114
VAWS G LAS SFD + I+ ++ D GH V + W A + +LL+T
Sbjct: 65 RKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGHENEVKSVAW-APSGNLLAT 122
Query: 115 ASGDKTVRIWDARTQ----------------------KSQIMLASGSFDKSVAIFALDKK 152
S DK+V +W+ + SQ +LAS S+D +V ++ ++
Sbjct: 123 CSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQ-EEG 181
Query: 153 GDLNKEVVYRGHTGSVDQLCWHATNP--DLLSTASGDKTVRIWDARTQ-KSQIIATKGEN 209
D GH +V + A +P L++ S D+TVRIW Q +A G +
Sbjct: 182 DDWVCCATLEGHESTVWSI---AFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238
Query: 210 -----------------INITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHL 252
++ W +A +D + + P++ T + HL
Sbjct: 239 PSWKCICTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHL 298
Query: 253 METRS 257
+ S
Sbjct: 299 RQAHS 303
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCDGR 64
H P +LL S S DD VK + D + H S V S+A+ G+
Sbjct: 155 HVVWHPSQELLASAS-------YDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQ 207
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
RLAS S D++V I+ G+ + V G S +C T SG T I+
Sbjct: 208 RLASCSDDRTVRIWRQYLPGN-EQGVACSGSDPSWKCIC----------TLSGFHTRTIY 256
Query: 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV------VYRGHTGSVDQLCWHATNP 178
D + LA+ D ++ +F D D + + + H+ V+ + W+ P
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEP 316
Query: 179 DLLSTASGDKTVRIWD 194
LL++ S D V W+
Sbjct: 317 GLLASCSDDGEVAFWE 332
>sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33
PE=2 SV=1
Length = 1330
Score = 63.5 bits (153), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 34 YVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92
YVK++ ++ N++K +QAH + ++S + A+ S D +V I+ + ++E +
Sbjct: 184 YVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERIL 240
Query: 93 RGHTGSVDQLCWHATNPDLLS-TASGDKTVRIWDART---------QKSQIM-------- 134
RGH V + WH T ++S + + ++ WD +T K+ +M
Sbjct: 241 RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG 300
Query: 135 --LASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
L + S D +F + +L +E+ V+RGH + WH + L ++ D ++
Sbjct: 301 NWLLTASRDHLCKLFDIR---NLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLL 357
Query: 192 IWDARTQKS---QIIATKGENINITWAPNGNTIAVGNKEDLVTF 232
W +K +A +G ++ W P G+ + G+ + F
Sbjct: 358 FWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V V W+ +GRRL +G+ S F L N E + + H V + W + N +
Sbjct: 122 VFVVRWTPEGRRLVTGA---SSGEFTLWNGLTFNFETILQAHDSPVRAMTW-SHNDMWML 177
Query: 114 TASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKK-------GDL--------NKE 158
TA V+ W + ++ A + + D K G + ++E
Sbjct: 178 TADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEE 237
Query: 159 VVYRGHTGSVDQLCWHATNPDLLS-TASGDKTVRIWDARTQKS--QIIATKGENINITWA 215
+ RGH V + WH T ++S + + ++ WD +T +S + A K + +
Sbjct: 238 RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLN 297
Query: 216 PNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
NGN + +++ L D +++L +E RGH E ++
Sbjct: 298 LNGNWLLTASRDHLCKLFD-IRNL--KEELQVFRGHKKEATAV 337
>sp|A8IZG4|CIAO1_CHLRE Probable cytosolic iron-sulfur protein assembly protein CIAO1
homolog OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_130093 PE=3 SV=1
Length = 352
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 31/176 (17%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
Q H + SVAWS GR LA+ SFD +VA++ L G + GH V + W
Sbjct: 62 QCHTRTIRSVAWSPTGRALATASFDATVAVWEL-SSGVWEQVAELEGHENEVKCVAW--- 117
Query: 108 NPD--LLSTASGDKTVRIWDARTQK----------------------SQIMLASGSFDKS 143
NPD L++T D++V IW++ + S +L S +D +
Sbjct: 118 NPDGRLIATCGRDRSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSGELLVSAGYDDT 177
Query: 144 VAIFALDKKGDLNKEVV---YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 196
+ ++ D + + GH +V +CW + L++ S D T+R+W++R
Sbjct: 178 IKLWTYDGDEWGCAQTLGGTGTGHESTVWDVCWDPVSRARLASCSDDLTLRLWESR 233
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 44/188 (23%)
Query: 78 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK------- 130
F L+ G L+ GH V + W D+L++ SGDKTVRIW R +
Sbjct: 4 FTLEPIGALS------GHDDRVWNVAWSPQG-DMLASCSGDKTVRIWSRRQPRPSEQWYC 56
Query: 131 SQIM-------------------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
S I+ LA+ SFD +VA++ L G + GH V +
Sbjct: 57 SAILDQCHTRTIRSVAWSPTGRALATASFDATVAVWEL-SSGVWEQVAELEGHENEVKCV 115
Query: 172 CWHATNPD--LLSTASGDKTVRIWDARTQK--SQIIATKGENIN---ITWAPNGNTIAVG 224
W NPD L++T D++V IW++ + + +G + + +TW P+G +
Sbjct: 116 AW---NPDGRLIATCGRDRSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSGELLVSA 172
Query: 225 NKEDLVTF 232
+D +
Sbjct: 173 GYDDTIKL 180
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 40 THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK----EVVYRGH 95
T I H +V +VAWS G LAS S DK+V I++ + + ++ + H
Sbjct: 5 TLEPIGALSGHDDRVWNVAWSPQGDMLASCSGDKTVRIWSRRQPRPSEQWYCSAILDQCH 64
Query: 96 TGSVDQLCWHATNPDLLSTASGDKTVRIWDART----QKSQI-----------------M 134
T ++ + W T L+TAS D TV +W+ + Q +++ +
Sbjct: 65 TRTIRSVAWSPTG-RALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRL 123
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+A+ D+SV I+ + V +GH+ V + WH + +LL +A D T+++W
Sbjct: 124 IATCGRDRSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSG-ELLVSAGYDDTIKLW 181
>sp|O76071|CIAO1_HUMAN Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Homo sapiens GN=CIAO1 PE=1 SV=1
Length = 339
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 48/252 (19%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V VAWS G LAS SFD + I+ ++ D GH V + W A
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGHENEVKSVAW-AP 115
Query: 108 NPDLLSTASGDKTVRIWDARTQ----------------------KSQIMLASGSFDKSVA 145
+ +LL+T S DK+V +W+ + SQ +LAS S+D +V
Sbjct: 116 SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP--DLLSTASGDKTVRIWDARTQ-KSQI 202
++ +++ D GH +V L A +P L++ S D+TVRIW Q
Sbjct: 176 LYR-EEEDDWVCCATLEGHESTVWSL---AFDPSGQRLASCSDDRTVRIWRQYLPGNEQG 231
Query: 203 IATKGEN-----------------INITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERT 245
+A G + +I W +A +D + + P++ T
Sbjct: 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT 291
Query: 246 LTSRGHLMETRS 257
+ HL + S
Sbjct: 292 FSLTAHLHQAHS 303
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 52 SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 111
S+ +AW+ G LAS D+ + I+ + + K V+ GH +V ++ W +
Sbjct: 17 SRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NY 75
Query: 112 LSTASGDKTVRIWDARTQKSQI---------------------MLASGSFDKSVAIFALD 150
L++AS D T IW + +LA+ S DKSV ++ +D
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135
Query: 151 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENI 210
++ + V HT V + WH + +LL++AS D TV+++ AT +
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHE 194
Query: 211 NITWA----PNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRG 250
+ W+ P+G +A + + V + LP E+ + G
Sbjct: 195 STVWSLAFDPSGQRLASCSDDRTVRIWR--QYLPGNEQGVACSG 236
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 111 LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
LL R W + +LAS D+ + I+ + + K V+ GH +V +
Sbjct: 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRK 66
Query: 171 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----KGENINITWAPNGNTIAVGNK 226
+ W + L++AS D T IW + + T + E ++ WAP+GN +A ++
Sbjct: 67 VAWSPCG-NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 227 EDLVTFIDV 235
+ V +V
Sbjct: 126 DKSVWVWEV 134
>sp|Q32PJ6|CIAO1_BOVIN Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Bos taurus GN=CIAO1 PE=2 SV=1
Length = 339
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 52/254 (20%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWH 105
+ H V VAWS G LAS SFD + I+ KK + + E V GH V + W
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIW---KKNEDDFECVTTLEGHENEVKSVAW- 113
Query: 106 ATNPDLLSTASGDKTVRIWDARTQ----------------------KSQIMLASGSFDKS 143
A + +LL+T S DK+V +W+ + SQ +LAS S+D +
Sbjct: 114 APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDT 173
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP--DLLSTASGDKTVRIWDARTQ-KS 200
V ++ +++ D GH +V L A +P L++ S D+TVRIW
Sbjct: 174 VKLYR-EEEDDWVCCATLEGHESTVWSL---AFDPSGQRLASCSDDRTVRIWRQYLPGNE 229
Query: 201 QIIATKGEN-----------------INITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRE 243
Q +A G ++ W T+A +D + + P++
Sbjct: 230 QGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQ 289
Query: 244 RTLTSRGHLMETRS 257
T + H+ + S
Sbjct: 290 PTFSLTAHVPQAHS 303
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 52 SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 111
S+ +AW+ G LAS D+SV I+ + + K V+ GH +V ++ W +
Sbjct: 17 SRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCG-NY 75
Query: 112 LSTASGDKTVRIWDARTQKSQI---------------------MLASGSFDKSVAIFALD 150
L++AS D T IW + +LA+ S DKSV ++ +D
Sbjct: 76 LASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135
Query: 151 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENI 210
++ + V HT V + WH + +LL++AS D TV+++ AT +
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHE 194
Query: 211 NITWA----PNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRG 250
+ W+ P+G +A + + V + LP E+ + G
Sbjct: 195 STVWSLAFDPSGQRLASCSDDRTVRIWR--QYLPGNEQGVACSG 236
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 111 LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
LLS R W + +LAS D+SV I+ + + K V+ GH +V +
Sbjct: 7 LLSRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRK 66
Query: 171 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----KGENINITWAPNGNTIAVGNK 226
+ W + L++AS D T IW + + T + E ++ WAP+GN +A ++
Sbjct: 67 VAWSPCG-NYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 227 EDLVTFIDV 235
+ V +V
Sbjct: 126 DKSVWVWEV 134
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 100
H Y H V S+ +S G LAS S D++V ++ LD+KG K ++ HT V
Sbjct: 50 HARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKG---KSSEFKAHTAPVR 106
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------------------MLASGSFD 141
+ + A + LL TAS DK++++W Q+ ++ S S D
Sbjct: 107 SVDFSA-DGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSED 165
Query: 142 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 199
K++ I+ K +N G VD NP+ +++A D V+IWD R K
Sbjct: 166 KTIKIWDTTNKQCVNNFSDSVGFANFVD------FNPNGTCIASAGSDHAVKIWDIRMNK 219
Query: 200 -SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N +++ P GN++ + + V +D+++
Sbjct: 220 LLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIE 259
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 32/245 (13%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQ--AHGSKVHSVAWSCDGRRLASGS 70
+P K L SGS +D + +N ++ Y+ H + SV +S G +AS S
Sbjct: 27 NPNTKQLASGS-------MDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASAS 79
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DK+V ++ KG+ V++ HTG+V + + L+ TAS DKT+++W QK
Sbjct: 80 RDKTVRLWVPSVKGE---STVFKAHTGTVRSVSFSGDGQSLV-TASDDKTIKVWTVHRQK 135
Query: 131 SQIML---------ASGSFDKSVAIFALDKK-----GDLNKEVVYR--GHTGSVDQLCWH 174
L A S D + + A D K ++E ++ H G V+ + +H
Sbjct: 136 FLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFH 195
Query: 175 ATNPDLLSTASGDKTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKEDLVTF 232
+ ++ A+ D TV++WD R K G ++++ P+GN + + + +
Sbjct: 196 PSGT-CIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKV 254
Query: 233 IDVVK 237
+D+++
Sbjct: 255 LDLLE 259
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 37/194 (19%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H V +V ++ + ++LASGS D + I+ + + + V ++ SVD
Sbjct: 12 RHFKGHRDTVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVD---- 67
Query: 105 HATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGH 164
+ + L+++AS DKTVR+W + + V++ H
Sbjct: 68 FSPSGHLIASASRDKTVRLWVPSVK--------------------------GESTVFKAH 101
Query: 165 TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENIN----ITWAPNGNT 220
TG+V + + L+ TAS DKT+++W QK + + ++IN ++P+G
Sbjct: 102 TGTVRSVSFSGDGQSLV-TASDDKTIKVWTVHRQK--FLFSLNQHINWVRCAKFSPDGRL 158
Query: 221 IAVGNKEDLVTFID 234
I + + + D
Sbjct: 159 IVSASDDKTIKLWD 172
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 104/213 (48%), Gaps = 45/213 (21%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG---DLNKEVVYRGHTGSVDQLC 103
++AH V SV++S DG+ L + S DK++ ++ + ++ LN+ + + +
Sbjct: 98 FKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---------VR 148
Query: 104 WHATNPD--LLSTASGDKTVRIWDARTQK-------------------SQIMLASGSFDK 142
+PD L+ +AS DKT+++WD +++ S +A+ + D
Sbjct: 149 CAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDN 208
Query: 143 SVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 201
+V ++ + +NK + Y+ H+G V+ L +H + + L TAS D T+++ D + +
Sbjct: 209 TVKVWDI----RMNKLIQHYQVHSGVVNSLSFHPSG-NYLITASNDSTLKVLDLL--EGR 261
Query: 202 IIAT----KGENINITWAPNGNTIAVGNKEDLV 230
++ T +G ++ ++ G A G ++ V
Sbjct: 262 LLYTLHGHQGPVTSVKFSREGEFFASGGSDEQV 294
>sp|Q5M7T1|CIAO1_RAT Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Rattus norvegicus GN=Ciao1 PE=2 SV=1
Length = 339
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 118/305 (38%), Gaps = 59/305 (19%)
Query: 5 VIQFHTPKSPEYKLL-----PSGSQFHLVCKIDDYVKHFNTHND---IKEY--QAHGSKV 54
V+Q P P+ + P+G+ C D ++ + T D K + H V
Sbjct: 6 VLQSRVPAHPDSRCWFLAWNPTGTLL-ASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTV 64
Query: 55 HSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 114
VAWS G LAS SFD + I+ ++ D GH V + W A + +LL+T
Sbjct: 65 RKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGHENEVKSVAW-APSGNLLAT 122
Query: 115 ASGDKTVRIWDARTQ----------------------KSQIMLASGSFDKSVAIFALDKK 152
S DK+V +W+ + SQ +LAS S+D +V ++ ++
Sbjct: 123 CSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQ-EEG 181
Query: 153 GDLNKEVVYRGHTGSVDQLCWHATNP--DLLSTASGDKTVRIWDARTQ-KSQIIATKGEN 209
D GH +V + A +P L++ S D+TVRIW Q +A G +
Sbjct: 182 DDWVCCATLEGHESTVWSI---AFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238
Query: 210 -----------------INITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHL 252
++ W +A +D + + P++ T + HL
Sbjct: 239 PSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHL 298
Query: 253 METRS 257
+ S
Sbjct: 299 RQAHS 303
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 28/196 (14%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCDGR 64
H P +LL S S DD VK + D + H S V S+A+ G+
Sbjct: 155 HVVWHPSQELLASAS-------YDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQ 207
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
RLAS S D++V I+ G+ + V G S +C T SG T I+
Sbjct: 208 RLASCSDDRTVRIWRQYLPGN-EQGVACSGSDPSWKCVC----------TLSGFHTRTIY 256
Query: 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV------VYRGHTGSVDQLCWHATNP 178
D + LA+ D ++ +F D D + + + H+ V+ + W+
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEA 316
Query: 179 DLLSTASGDKTVRIWD 194
LL++ S D V W+
Sbjct: 317 GLLASCSDDGEVAFWE 332
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,465,328
Number of Sequences: 539616
Number of extensions: 4087083
Number of successful extensions: 20250
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 1021
Number of HSP's that attempted gapping in prelim test: 12053
Number of HSP's gapped (non-prelim): 5045
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)